LOCUS       DASCQP010000001         3497 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000004019, whole genome shotgun sequence.
ACCESSION   DASCQP010000001 DASCQP010000000
VERSION     DASCQP010000001.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3497)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3497)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3497
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000004019"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..612)
                     /locus_tag="QF480_00005"
     CDS             complement(<1..612)
                     /locus_tag="QF480_00005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN04973.1"
                     /translation="MKSILTILSVVILITITSCEEPAQQSTTTITSSFENSGIIQEII
                     QVSSYTYCLVKEGSVEYWIAISKMPVKAGQTLYFDKGAEMKDFHSKELDRTFPSIYFI
                     ADASTNPNVVAGTNQMQQQLQQPQKPKIVKNKIEVEKADGGITIAELYANRENYAGKR
                     VKIRGEVTKISGELILNKYWVHLQDGTEHNGDFDLTVTTLDTVN"
     gene            1163..1414
                     /locus_tag="QF480_00010"
     CDS             1163..1414
                     /locus_tag="QF480_00010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005635197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HJN04974.1"
                     /translation="MNIYVGNLNFKVSESELESLFGEFGTVESVKIITDKFSGRSKGF
                     GFITMENDEEATKAMKELDGTSFQEREIVVNEAKPKRQF"
     gene            1436..1636
                     /locus_tag="QF480_00015"
     CDS             1436..1636
                     /locus_tag="QF480_00015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_390076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock domain-containing protein"
                     /protein_id="HJN04975.1"
                     /translation="MTKGKVKWYNDVKGFGFIESETGEDIFVHRTSLESPYSGLQTDE
                     EVTFEIKQGEKGLVAINVKSAN"
     gene            1868..2320
                     /locus_tag="QF480_00020"
     CDS             1868..2320
                     /locus_tag="QF480_00020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004292347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock domain-containing protein"
                     /protein_id="HJN04976.1"
                     /translation="MGRSQETFNKKEVRNKKEKKRQEKEKKKLARKESEKKSGLDDMI
                     AYVDENGMISSAPPDPTKKKDIKLEDIATGVPNRDSIEDEDPIRKGIVTFYNDSKGFG
                     FIRDLETQESVFVHANNLLEEISEDNVVSFEKEMGPKGPAATQVKLFK"
     gene            2646..3350
                     /locus_tag="QF480_00025"
     CDS             2646..3350
                     /locus_tag="QF480_00025"
                     /inference="COORDINATES: protein motif:HMM:NF022441.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2807 domain-containing protein"
                     /protein_id="HJN04977.1"
                     /translation="MKIKIAFLAVTTLLFAFSIKAQVQKEITVSSFNEVKFEGSAQWI
                     LIPAHEEKVVIESKSKDIFEKIKVVQSGDLLTISTTEKDKSITKLFKSVIINVYFKSI
                     ESVSLSGVGSVKANEIFKAEKFAATLRGTGSMDLNIKCSDFAGNMFGTGVLTTVGYAD
                     KAVVRVEGVGTFEGYGFVTTDMDITVSGVGAAKVYTTGNLMATLNGVGSIKYMDDPKT
                     KNLDTNGLGSIKQKND"
BASE COUNT         1269 a          452 c          627 g         1149 t
ORIGIN      
        1 gttaacagta tctaatgtag taactgttaa atcaaaatct ccattatgtt cagttccatc
       61 ttgaagatga acccagtatt tgttcaagat aagctcacca ctaattttag tgacttctcc
      121 tctaattttt actcgtttgc cagcataatt ttctctattg gcatatagtt cagcgatggt
      181 aataccacca tcagcttttt caacttcaat cttattcttt acaattttag gtttttgcgg
      241 ttgttgtagt tgttgttgca tttgattagt gccagctaca acatttgggt ttgtgcttgc
      301 atccgctata aaataaattg atggaaatgt acgatcaagt tccttactat ggaagtcttt
      361 catttcagca cctttatcaa aatataaggt ttgcccagct ttaacaggca ttttcgaaat
      421 agcaatccaa tattcaacgg atccttcttt cactaaacaa taagtatagc ttgaaacttg
      481 aataatctct tgtataatac cactattttc aaaactagat gttattgtag tcgtggattg
      541 ttgtgctggt tcttcgcaag aagttatcgt aattaatatt acaactgata aaattgttaa
      601 aattgatttc atttttctag tatattatgt tattaattta tttaaaaata tgaccggtaa
      661 agatatacaa ataccctata agtatttata aaattatcca ctaacatttg ctggctataa
      721 tacagtaatt caatacgtta taaataaata tcaaaaaatt taaatatata gcttcacata
      781 aggcaaatta tttaggatta tcagggatat ttcgtgatgg ttagcgtaaa aatattaatt
      841 aacgaattga atttgacgag tgattattaa gaattttgaa atatatttta taagaatcta
      901 aatttatatc gaattgggat gcatgataat agagtttgac gttctaattt tttttgtagt
      961 atctctgtaa tacaattgcg atatgagatt tttgtttatg tgtaagaaat atttataatt
     1021 tgtaaaagcc tgaaaataaa tgcgtacctt tgccagcttt agcaataggc taatatgcta
     1081 gttgcggtgg ttctgtcaaa ttttcttcag aattaagcaa actaacatgt ttagaaaaat
     1141 taacaattta aatgtagaga ttatgaatat ttatgtagga aatcttaatt tcaaggtgag
     1201 tgaaagtgaa ttagaaagtt tatttggtga gtttggaacc gtagaatcag ttaaaattat
     1261 cactgataaa tttagcggta gaagtaaagg ctttggattt ataactatgg aaaacgatga
     1321 agaagcaacc aaggcaatga aagaactaga tggtacttct tttcaagaaa gagaaatagt
     1381 tgtaaatgag gcaaaaccaa aaagacagtt ttaatactta tttgaatact ttattatgac
     1441 aaagggaaaa gtaaaatggt acaatgatgt aaaaggtttt ggctttattg aatcggaaac
     1501 tggtgaagat atatttgttc accgaacaag tttagagagt ccgtatagcg gacttcagac
     1561 tgatgaggaa gttactttcg agatcaagca aggtgaaaag gggttagttg ccattaacgt
     1621 gaaatctgca aattaaaatc ccttaatctt aattcaggta ctattagtgg cttcacatta
     1681 cgatttcatt tgtgataaag taggagtagg tatttgtact atgtacaatt aaaggctttc
     1741 gataattaaa caggaatagc cggtatgtag tcaactgtat gagttgacaa tattgataga
     1801 gatggatggc acgttttatt acgacaataa ttaaaaaagt aaatattaag taaagttcga
     1861 aaaatttatg ggtagatcac aagaaacctt caacaaaaaa gaagtacgaa acaaaaagga
     1921 gaaaaaacgc caagaaaaag agaaaaagaa actggcaagg aaagaaagtg agaaaaaaag
     1981 tggtcttgac gacatgattg cttatgtaga tgaaaatgga atgatttctt ccgcacctcc
     2041 tgatcccaca aaaaagaaag atatcaaatt agaagatatt gcgacaggag tccctaatcg
     2101 tgattcgatt gaagatgaag accccataag aaaaggaata gtgacatttt ataatgattc
     2161 aaaaggtttt gggtttatta gggacctgga aactcaggaa agtgtttttg tacatgctaa
     2221 caatttgcta gaagaaataa gtgaagataa tgttgtaagc tttgaaaaag agatgggtcc
     2281 aaagggccct gcagcgacac aagttaagct atttaagtag ttcaatccta gaacgatttt
     2341 agtatcctga taccatttca cacaactatt ttaatttaag gctaaggtaa tttctaaagt
     2401 atttatatta gcttattcat gtattaatac tcatatcaaa caaactagta tttatccaca
     2461 aatctgtaat ggcattgaat atgtagattc caatggacag agataagcaa tgccaaatca
     2521 tattagttaa gataaattat tcctcatttt tgcaacttga tcaacttata gttgtccttt
     2581 aaactacatt aaatttaaac gtacatttac aaaagtgcac gtatttataa actaaatctg
     2641 aaacaatgaa aattaaaatt gcatttttag ctgtaactac cttactattt gcttttagta
     2701 ttaaagctca ggtacaaaag gaaattactg ttagttcatt taacgaagta aaatttgaag
     2761 gatctgccca atggatatta atacctgctc atgaagaaaa ggttgtgatt gaaagtaaaa
     2821 gtaaagatat atttgagaaa ataaaggttg ttcaaagtgg agatttgctg actattagta
     2881 ctactgaaaa agacaaaagt ataactaaac ttttcaaatc tgttattata aatgtttatt
     2941 tcaaatcaat agaatctgtg tcattgtctg gtgttggatc agttaaagca aatgaaatat
     3001 ttaaagcaga aaagtttgct gccacattac gagggactgg tagtatggat ttaaatatta
     3061 agtgttcaga tttcgccgga aatatgtttg gcaccggtgt tctaaccacc gtaggttatg
     3121 ctgataaagc tgttgtaaga gttgaaggtg tgggaacatt tgagggctat ggatttgtta
     3181 caactgatat ggacataaca gtttctggtg ttggagcagc aaaagtttat acaactggta
     3241 acttgatggc aacattaaat ggtgttggtt caatcaaata tatggatgat ccgaaaacaa
     3301 aaaatctgga cacaaatgga cttggatcaa ttaaacaaaa gaatgactaa gttttgttat
     3361 taatctacag agtaatctta taagactcta tttctaaaaa ttgatatgtg cttaagaaaa
     3421 tagaaataaa gtagtctatg taaattcggt attatctcat agagaatcca taattgaaag
     3481 tcttgtagtt ttctaca
//
LOCUS       DASCQP010000002         1795 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000004691, whole genome shotgun sequence.
ACCESSION   DASCQP010000002 DASCQP010000000
VERSION     DASCQP010000002.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1795)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1795)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1795
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000004691"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..610)
                     /locus_tag="QF480_00030"
     CDS             complement(<1..610)
                     /locus_tag="QF480_00030"
                     /inference="COORDINATES: protein motif:HMM:NF014375.3"
                     /note="Presence of a B(12) (cobalamin)-binding domain
                     implies dependence on cobalamin itself, in one of its
                     several forms, or in some unusual lineages, dependence on
                     a cobalamin-like analog; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-dependent protein"
                     /protein_id="HJN04978.1"
                     /translation="MLAKKKKLLLINPLNSGTKGLIIHKQVIYPPLGLGIIATLTPDD
                     WEVELLDENFDDFEYKDADLVALTALTSSVTRAYEIASYYREKGITTVIGGIHASMML
                     GEAIKFVDAVVIGEVESVWPSLIEDFEKGEIKKNYTGILLSMENAVKPQRDLFHRDYN
                     FASIQTTRGCPMSCDFCSVHTFNGNSYRLRPVDEVLDELETLE"
     gene            complement(752..>1795)
                     /locus_tag="QF480_00035"
     CDS             complement(752..>1795)
                     /locus_tag="QF480_00035"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN04979.1"
                     /translation="IDYGLVYANGASNYIVNNQLVTYGEPSFSLDAAIINILKPNSTD
                     ASEERFNPACSYPEVVIQNTGSTTLTSLDIEYFVEGGETENYAWNGSLDFLEQDTVIL
                     PIDDISFWISGSNSFTANISNPNNQEDEYEYNNTYTSQFEDIHVYPDGEYYTILLKTN
                     NYGWQTSYELSDGEGNLLYERHDCDNNTIYEDEFYLFPGCYNLRIDDSGDNGLEFWHQ
                     PNQGVGYFRIKNSDGGTLYTFDPDFGGFASFELGIGNITKIDDVTSPFVLNVFPNPTS
                     DKVTVTINSVENSTLSVSITNSMLVKIMEKEWSVNDSKFNTEIDLNHLPAGIYFIQIN
                     YGDQTKTKKVIKY"
BASE COUNT          582 a          330 c          278 g          605 t
ORIGIN      
        1 gttcaagagt ttccaactcg tcaagcactt catccacagg tcttaagcga taggagttgc
       61 cattaaaagt atgtacagag cagaagtcac agctcatcgg acaacctcta gttgtttgaa
      121 tacttgcaaa attatagtct ctatggaaaa ggtcacgctg tggtttaaca gcattttcca
      181 tagataataa tattcctgta tagtttttct ttatttcgcc tttttcaaaa tcttcaatta
      241 ggcttggcca aacgctttca acttcaccaa taacaacagc atctacaaat ttgatggcct
      301 cacctagcat cattgacgca tgaatacctc ctattactgt tgttattcct ttttcacgat
      361 agtaacttgc aatttcataa gcacgtgtta cgctagaagt aagagctgtt agggcaacga
      421 gatctgcatc tttatattca aaatcatcaa aattttcatc caatagttct acttcccaat
      481 catcaggtgt tagtgtagcg attattccta aacccaaagg gggataaata acctgcttat
      541 gaattattag tcctttagtg cctgaattta aaggatttat aagaagtagt tttttctttt
      601 ttgctagcat aattgaatgt tctcgggaca aatataatta ttaaacgaga agttgtattt
      661 actaaagtat acagaattca aaaaacttaa ttacgtggaa gaatcataaa attaagttca
      721 cgatcagtct ttaaaaacaa tggttgtcaa attaatattt aatgaccttt tttgtttttg
      781 tttgatcacc atagttgatt tgaataaaat agatcccggc aggaagatgg ttcaaatcaa
      841 tctctgtatt gaatttgcta tcattaactg accattcctt ttccattatt ttcacaagca
      901 ttgagtttgt aatgctaacg gataatgtac tattttctac actattaatt gtaacagtaa
      961 ctttatcaga agttggattt ggaaaaacgt taagcacaaa aggactggtt acatcatcaa
     1021 tttttgtgat attgccaata ccaagttcaa aggacgcaaa tcctccaaaa tcaggatcga
     1081 atgtataaag agttccacca tcagaatttt ttatcctaaa atagccaacc ccttgatttg
     1141 gctggtgcca aaattcaaga ccgttatccc ctgaatcatc aattcgcaaa ttatagcagc
     1201 cagggaaaag atagaactca tcttcgtaaa tagtattatt atcacagtca tgtctctcat
     1261 acaacaaatt accttctcca tcagacaatt cgtatgatgt ttgccaaccg tagttattcg
     1321 ttttcaatag tatagtataa tattcaccat cagggtatac atgaatgtct tcgaattgtg
     1381 aagtataggt attattgtat tcgtattcat cttcctgatt atttggattg ctgatatttg
     1441 ctgtaaatga atttgacccg ctgatccaga atgaaatatc atcgatgggc aaaataactg
     1501 tatcctgctc taaaaaatcc agtgatccat tccacgcata gttttcagtt tctccacctt
     1561 caacaaagta ttcaatatcc aaacttgtta aagtagttga tcctgtattt tgaataacaa
     1621 cttcgggata agaacatgca ggattgaatc tttcttcact agcgtcagta ctgtttggtt
     1681 ttaagatatt aattatagca gcatccaaac tgaagctagg ttctccataa gttactaatt
     1741 gattgttaac aatataattt gaagctccat ttgcataaac caaaccataa tcaat
//
LOCUS       DASCQP010000003         9365 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000006162, whole genome shotgun sequence.
ACCESSION   DASCQP010000003 DASCQP010000000
VERSION     DASCQP010000003.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 9365)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9365)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9365
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000006162"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..470)
                     /locus_tag="QF480_00040"
     CDS             complement(<1..470)
                     /locus_tag="QF480_00040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005633543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005436 - sodium:phosphate symporter
                     activity [Evidence IEA];
                     GO_function: GO:0015114 - phosphate ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0035435 - phosphate ion transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0044341 - sodium-dependent phosphate
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na/Pi symporter"
                     /protein_id="HJN04980.1"
                     /translation="MADVLVVIGKTLTLVGSLGLFLYGMKLMSEALQKVAGSKMRQIL
                     AAMTNSRIKGVFTGLLITTAIQSSSAATVMVVSFVNAGLISLIASIGIIMGANIGTTI
                     TAWIIALLGFKVSLSFLSLPLIGLSFPLFFSKNSIRKSWGEFVIGFAILFIGLQ"
     gene            848..2293
                     /locus_tag="QF480_00045"
     CDS             848..2293
                     /locus_tag="QF480_00045"
                     /inference="COORDINATES: protein motif:HMM:NF024753.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HJN04981.1"
                     /translation="MKKYLIIATLFLSIFNLNAQNKDYELWSFETNDRIYSNPQIHGN
                     TLYFGCNDNTFYAIDANNGDELWQYQINTYIQSGSTIVDSIIFFEAGNNCYALNKDTG
                     EEIWIYVNNDSQGEEKLDNWDYHHATPVIDDSLVYFGLGNGSMLGIEIATGNIKVQTS
                     AVDSVPIRSTPVVNDGILYFGDWDGKAYAYDINANEILWTRNTYVGPPPYETFGMLNT
                     KMLVYDSMLIMGARNPRIYALNAYTGNPEWIFEVSDGGWISGDPYIENDTLYIGGSDC
                     HKLFALDVHTGDLFWDYMFLYNNFSQPKVCGDYVLFTTGNAYANNGTNYGHGYLYAVN
                     KFDGSLKNFSRIGGNLFTTPIFHNGQIIVGSDDKHIYSLDSISFVSTYVNIEETGINS
                     VVDPKFYPNPFKDSITISYDLVLPTKVTIIIYSWSGQEIKRSHTEKRTVGEYEFLWDG
                     KDQQNNEVSPGAYVVEIHSKMVSTSQVIIKQ"
     gene            2448..3407
                     /locus_tag="QF480_00050"
     CDS             2448..3407
                     /locus_tag="QF480_00050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN04982.1"
                     /translation="MKETTLLTFLMTLFILSSINNYAQITDQITKNPEEAKIIYTDVE
                     NFIIAYSLLGPDSDTMNVIQKEYIDKGTAGLFMFIEKYNLSAKKITNALKKYPEHYAA
                     IPERLEWFKTQEKDIHLYFSKLQYFLPHVVFPPTYFLIGAQRGINSASSEGQLITIDK
                     SAANISKDHLSTLIIHELLHFQQVLAIGYPQPYLAIYGPEKSLLAITIREGIAEFFAD
                     LVTGEYTQDQAKQFVLENEKELWKKFQREMNGKETGDWMWEKPDNPNQPRDIGYVFDA
                     LIVEYYYKHAPDVFETTKDILSVTDYPAFLERTEYQHKFDNVE"
     gene            complement(3473..4288)
                     /locus_tag="QF480_00055"
     CDS             complement(3473..4288)
                     /locus_tag="QF480_00055"
                     /inference="COORDINATES: protein motif:HMM:NF018649.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1295 domain-containing protein"
                     /protein_id="HJN04983.1"
                     /translation="MKQKVKDLLKILAIYIIAMFAAVITLKYVPINDILWKTALADFV
                     AMVIVFIFSVRYKNSSVYDPYWSAAPVIIVIYWLFNSGQTDFYYKIIWGLIVIWGTRL
                     TWNWILRWDGMEDEDWRYVNIKKKTGKFYWLASFFGIHLIPTALVFMGLVPIYYMFNS
                     TAISPTSWFAVIAVLFILGAIYLEKTADDTLRIHIKSGRSSTERLQRNVWAIIKYPNY
                     AGEVLFWWGLYFVAIVVDLSLWWTIFGPASITLLFVFVSVPIMKKRLANKSYN"
     gene            complement(4439..5194)
                     /locus_tag="QF480_00060"
     CDS             complement(4439..5194)
                     /locus_tag="QF480_00060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006842764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HJN04984.1"
                     /translation="MAGKNELKLAVLIDADNIPYSNIAGMLDEIAKLGVPTIKRIYGD
                     WTKPTVSGWKPALLEHAITPIQQYSYTSGKNATDSAMIIDAMDILHSQKVDGFCLVSS
                     DSDFTRLATRLRESGMLVIGIGERKTPNPFIVACDKFIYIEIIGTKVIRKTTETSTAK
                     TQEEAVKIDSIDNKLIQLLKSSIEDIADYNGWAFLAEVGALIIKKKPDFDPRNYGFSK
                     LTPLIKSMDDIFDVDEREVEKTRIKHIYVRIKK"
     gene            complement(5493..6248)
                     /locus_tag="QF480_00065"
     CDS             complement(5493..6248)
                     /locus_tag="QF480_00065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN04985.1"
                     /translation="MDGQTRLIKAEKTCKEPPKRSRNVFTDIKYFLLDSPAANTFINF
                     GNGEEKRIYTESILQRIDIDVDKYKIFNIHRIGIEAPPSYVFDELLKWSGDSSCWPNN
                     IAKVYLQDKSLEKIRIYLFGRIKSLLGLKNGIFGFKFLHLFDLTAIRIHGTPASADVD
                     NARYLLYECKGGYPIGVFCMYVRSPILERGEKEMSQLFMMVGFDFFGSKTLSKMKFIR
                     RIWESFHNRVTGNVGKRFKQLCEWQFDKFTNGT"
     gene            complement(6410..6853)
                     /locus_tag="QF480_00070"
     CDS             complement(6410..6853)
                     /locus_tag="QF480_00070"
                     /inference="COORDINATES: protein motif:HMM:NF024803.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HJN04986.1"
                     /translation="MENAKLSKPTDPVFTLNIASRLSETPAHSIRQYIDKGLLLPFVT
                     KTGRHLFSEVDITRLKSIKNYLNDHGLNIAGIKAIYSLIPCWAIKKCSLSERNNCGAY
                     SSIATPCWEASNKSFICLNTDCRECEIYRIPENSKDLKDIIKEVT"
     gene            complement(7238..7462)
                     /locus_tag="QF480_00075"
     CDS             complement(7238..7462)
                     /locus_tag="QF480_00075"
                     /inference="COORDINATES: protein motif:HMM:NF012257.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HJN04987.1"
                     /translation="MKFRKSNTLGRPYANGENIIKQGDSGDYLFVIQQGKVEIIDESG
                     DKEIKLAELGKSEFFSEMGLFEKDVRSCTV"
     gene            complement(7452..8816)
                     /locus_tag="QF480_00080"
     CDS             complement(7452..8816)
                     /locus_tag="QF480_00080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN04988.1"
                     /translation="MEDNAANKLVLKEGSNIAVIGGGPSGSFFTYFALNFAERYGLNI
                     NIDVIEAKDFNCAGPAGCNNCGGIVSESLIQMLSADGIVLPADVIRKGIETYTLHLEQ
                     GFTEIGAPVDEQRIASMFRGLGPKGCSLGDHKSFDDHLMELCALKGANIIHDRVLNME
                     RNENGVIIKTKNNFEKKYDLVVGAVGLNKKTFELFSKISPSFVPPKTTCTFICEIHMD
                     EAQIDKYFGNSMHVFLLSLPNIKFGALIPKSKYVTLVLLGSNIDKEIAGKFLDSKPVR
                     KCFPKDFDLDSNITCRCFPYINVGSAKSAYSDRVVLIGDSSASKLYKNGIGAAYITAK
                     AAANTAIFQGISKENFKKHFQPTCNNLEIDNTIGKFIFMVTTVIQASPVLKSAMLRMV
                     VNEQLKERHVRKLSSILWDTFTGSAPYKDIFLRFLNPGVIVILSWNTIRAMLRMIKYN
                     KYEI"
BASE COUNT         3136 a         1627 c         1421 g         3181 t
ORIGIN      
        1 aactgtaatc cgataaacag aatagcaaat cctataacaa attcacccca tgattttcta
       61 atgctatttt ttgaaaagaa tagtgggaaa ctcaaaccta taagcggaag cgataagaaa
      121 ctaagactta ctttaaatcc cagtagggca attatccatg cagtaattgt agttccgata
      181 tttgccccca ttataattcc aattgaggca attaacgaaa taagaccagc atttacgaaa
      241 ctaactacca ttacagttgc tgcagaagaa gactgaatag cagttgtaat aagcaatccg
      301 gtgaaaactc ctttgatacg gctgttagtc attgcagcaa gaatttgcct catcttactt
      361 ccagcaactt tctgcaatgc ttcactcata agcttcatcc cataaagaaa aagcccgagc
      421 gatccaacga gggtaagtgt tttcccaata actaccagca catctgccat tactaatgtt
      481 cgtaattatt aatgatcaat aataaaacat ttctggcatg aacggtttaa aatatttcaa
      541 ttctttttaa aagttattta caagtgatga tctaactaag ttatcatctc aataaacttt
      601 atttaaattg taatattatt attgtttaac ctgcaaatgg atctctgatc gacaagttat
      661 agcatttaat atgcaaaaac aatattatgc aagataaaca tagtatatcg atgaatgatg
      721 tgaagttatc tatttgttct acaagaaagt atataaatat ttgatatcgc tttatttcat
      781 acaatattcg catattaatt ttaagattat tttaactaaa gttatgctaa ttgtaaaatc
      841 tcaagtcatg aaaaagtact taataatagc tactttattt ttgtcgatat ttaatctgaa
      901 tgcacaaaat aaagattatg aattgtggtc atttgagact aatgatcgta tctattcgaa
      961 cccccaaatc catggtaaca cactctattt cggttgtaat gacaatacat tctacgctat
     1021 agatgccaat aatggggatg aactttggca atatcaaatt aatacatata tacaatccgg
     1081 ttcaacgata gtagattcga ttatcttttt tgaggctggg aataattgtt atgctcttaa
     1141 caaagatacg ggagaagaaa tttggattta tgtaaataat gattcgcaag gagaagagaa
     1201 attagataat tgggattatc atcatgctac tcctgtaatt gacgattctc ttgtatattt
     1261 tggactgggt aacggatcaa tgttaggaat tgaaattgca acaggtaata taaaagttca
     1321 gacctcagct gtagattctg taccaattag gtcaactcct gttgttaacg atggcatcct
     1381 ttattttggc gattgggatg gtaaggcata tgcttatgac attaatgcaa acgaaatctt
     1441 atggactcgt aatacttatg ttgggcctcc tccatatgaa acttttggta tgctcaacac
     1501 aaaaatgtta gtatatgatt ctatgttgat tatgggtgcc agaaacccaa ggatatatgc
     1561 cttaaatgca tatactggta atccagaatg gatttttgag gttagcgatg gcggatggat
     1621 atcaggtgat ccgtacatcg aaaatgatac actttacatt ggaggctctg attgccataa
     1681 actgtttgca cttgatgttc atacaggaga tctattctgg gactacatgt tcttatataa
     1741 taatttttcg caaccaaaag tttgtggtga ttatgttttg tttacgacag gaaacgcata
     1801 tgcaaataat ggtacaaact atggacatgg ttatctgtac gctgtaaata aatttgacgg
     1861 ttcattgaaa aatttctctc gtattggagg aaacttattt actacaccga tcttccacaa
     1921 tggtcaaatt attgttggca gtgatgataa gcacatatat tctcttgatt ccatttcttt
     1981 tgtttcaact tatgtaaaca ttgaggaaac aggtattaac tctgtcgtag atccgaaatt
     2041 ttatccaaat ccttttaaag atagcattac tataagttat gatttagtac ttcccacaaa
     2101 agttaccatc atcatatata gttggtcagg ccaggaaatt aagagaagcc acacagagaa
     2161 aagaactgta ggtgaatatg aatttttatg ggatggcaaa gaccagcaaa ataatgaggt
     2221 atcaccaggt gcttatgttg ttgagataca ttcaaaaatg gtgagtacca gtcaagttat
     2281 tatcaaacaa taaatgatta atccacagat agttgattca gaccaataaa tcgattttct
     2341 tattaaagca taagatctaa tacaatagtt tgtgagaata tcaatccatt gtaacatttc
     2401 aaataaaatg aagtcacttg tagtactaat ttcaaaataa tctactaatg aaagaaacta
     2461 ccttacttac atttttaatg actttattta tactttcatc gattaacaac tatgctcaga
     2521 taaccgatca gataaccaaa aatccggaag aggcaaaaat catttatact gacgttgaga
     2581 attttataat tgcctacagt ttgcttggtc cagattcgga caccatgaat gttattcaga
     2641 aggaatatat tgacaaaggt actgctggcc ttttcatgtt tattgagaaa tataatcttt
     2701 cagcaaaaaa aataaccaat gcactaaaaa aatatcctga acactatgct gcaatacctg
     2761 aaagacttga gtggtttaaa acgcaggaaa aagatattca tttgtatttt tcaaaattac
     2821 aatacttcct tcctcatgta gtgttcccac caacctactt tttaatagga gcgcaaagag
     2881 gcatcaattc tgcttcttca gaaggtcagc taattactat tgataaatct gctgcgaata
     2941 tttcaaagga tcatctttca actctaatta ttcatgaatt attgcatttt cagcaagtac
     3001 ttgcaatagg atatccacaa ccttatttgg ctatttatgg accggaaaaa agtttactag
     3061 ctataacaat acgggaaggt atagctgaat tttttgctga tctggttaca ggtgagtata
     3121 cacaagatca agcaaagcaa tttgttttgg aaaacgaaaa agaattgtgg aaaaaattcc
     3181 aacgggaaat gaatggtaaa gaaaccggtg actggatgtg ggaaaaacct gacaatccaa
     3241 atcaaccaag ggatattggt tatgtttttg atgctcttat tgtggaatac tattataaac
     3301 atgctccgga tgttttcgaa actactaaag atatactttc agtaacagat tatccagcct
     3361 tccttgaaag aactgagtac caacacaagt ttgataatgt ggaatgattc aattgaagaa
     3421 gaaatttaaa aaaatctatt gaagttacct tactaattgt gatgtaaaag tatcaattat
     3481 aggatttatt ggccagacgt tttttcataa taggtacact gacgaaaaca aatagtagtg
     3541 ttattgaggc tggcccgaat attgtccacc acaaagaaag gtctactact attgctacaa
     3601 aatataaacc ccaccaaaag agaacttccc ctgcatagtt tgggtatttt ataattgccc
     3661 aaacatttct ctgcaatcgt tcagtactac tacggcccga tttaatatgt attcttaaag
     3721 tatcatcagc agttttctca aggtatattg ctcccagaat aaatagaacc gcaatcacag
     3781 caaaccatga tgtaggagat atggcagttg aattaaacat ataataaata ggtactaatc
     3841 ccataaatac taatgctgtt ggtataagat gaataccaaa aaaacttgct aaccaataaa
     3901 atttacctgt tttcttttta atattgacat accgccaatc ttcatcctcc attccatccc
     3961 atcgcaatat ccaattccat gttaatcgtg ttccccagat aacaattaac ccccaaataa
     4021 ttttatagta aaaatcggtt tgccctgaat tgaaaagcca gtaaatcaca ataataactg
     4081 gagcagcact ccaatatgga tcatatacac tggaattttt atatctcaca ctaaagataa
     4141 atacaataac catagctaca aagtcggcca aagccgtttt ccaaagtatg tcattaatag
     4201 gtacatactt taaggttatt acagctgcga acattgctat aatataaata gctaaaattt
     4261 tgagtaggtc tttaactttt tgtttcatac aataccagat tcatattata tttttacaaa
     4321 ggtggtaatt atattgaaag taaagaagga tttttctaaa aaatacttta ttacaaaaga
     4381 aattgtgaaa tctaaaatga agatgcatga gtagcacaat gattctattt aggttcagtt
     4441 actttttgat tctcacataa atatgtttaa tacgtgtctt ttcgacttct cgttcatcaa
     4501 catcaaaaat atcatccatt gatttgatca acggtgttaa ttttgagaat ccataatttc
     4561 gtggatcgaa atctggtttc tttttgatga ttaatgcccc aacctcagct aaaaatgccc
     4621 agccattata atcagcaata tcttcaatcg aagattttaa taattgaatt aacttgttgt
     4681 caatcgaatc aattttcact gcctcttctt gagttttggc tgtagaagtt tctgtcgtct
     4741 ttctaattac tttagtccct attatttcaa tataaataaa cttatcacaa gcaacaataa
     4801 atggattggg agttttcctt tccccaatac cgattactaa catgcctgat tctcttaatc
     4861 tggtagccaa ccgagtaaag tcgctatcac tggaaacaag acaaaatccg tctacttttt
     4921 ggctatgtag tatatccata gcatcaataa tcattgctga atctgttgca tttttacctg
     4981 aagtataact gtattgttga attggtgtta ttgcatgttc aagcaaggct ggtttccaac
     5041 cagatactgt aggttttgtc caatctccat atattcgctt aattgtagga acgccaagtt
     5101 ttgcaatctc atccagcata ccagcaatat ttgaataagg tatattatct gcatcaataa
     5161 ggacggctaa ttttaattca ttttttcctg ccatggttgt atattttata gtatgccata
     5221 tattctaatg ggtgaataat cttaccctga tttattcatt tgatttaaaa gtgtaagttg
     5281 agtagtatat tatcatccaa atatattaaa attttagctt aatgatattt gttgtgtggt
     5341 gtataatatt tgcgtgaaat ttaatagacc acaagcaaca aaccggcaat tataacttaa
     5401 aagtgttatt ggagctttta cgataggtta taatcgttga gaaaatgaat gttagctata
     5461 aagttgatgt aattttacaa tgaattgagc atctatgtgc cgttagtaaa tttatcaaat
     5521 tgccactcac ataactgctt gaatcttttt cctacattac cggttacacg attgtgaaaa
     5581 gattcccaaa ttcgacgaat aaatttcatt tttgataagg ttttgctccc aaagaaatca
     5641 aatccaacca tcataaataa ttgtgacatt tccttttcac ccctttccag gatagggctt
     5701 cttacataca tacaaaatac accaatcgga tatcctccct tacactcata aagaaggtat
     5761 ctcgcgttat caacgtcggc agaagctggt gtaccatgaa ttctaattgc agtcaagtca
     5821 aataaatgta gaaatttaaa tccaaatatt ccattcttca gtcctaataa acttttaata
     5881 cggccgaaaa gatatattcg aattttttca agacttttat cctgaagata aaccttagca
     5941 atgttattag gccaacatga agaatcacca ctccatttaa gtagttcatc aaacacataa
     6001 ctaggtgggg cttcaattcc tattctatga atgttgaata ttttatattt atcaacatct
     6061 atatcaatcc tttgcagaat gctctctgta tatatccttt tttcttcccc attaccaaaa
     6121 ttaataaaag tattagctgc tggcgagtct aataagaaat atttgatgtc agtaaaaacg
     6181 ttcctgctcc tttttggggg ttctttacag gttttttcag ctttaattag tctggtttga
     6241 ccgtccattc tttgtacctg tttatcaaag gaaattaaat agctttttca tagtaaaatt
     6301 gactgtacaa aattaataaa atatgagtta aaaactaatt aacaatcagg gttttttaaa
     6361 ctattctttg ttagccaaac aatgtatctc actatctaaa tagtgcttat catgtcacct
     6421 cttttatgat gtcttttaaa tctttactat tctctggaat tctatatatt tcgcactccc
     6481 tacaatctgt attcaagcaa ataaaacttt tgtttgaagc ttcccagcat ggagtggcta
     6541 tcgaactata agctccacaa ttattccttt cgctcaatga acatttctta attgcccaac
     6601 atggtataag cgagtatatt gcttttatac cggcaatatt gagaccatga tcatttagat
     6661 agtttttgat ggatttcaac cgagtaatat cgacttccga aaataaatga cgaccagttt
     6721 tagtgacgaa aggaaggagc aaccccttat caatatattg cctaatggaa tgtgccggag
     6781 tttctgacaa tctggatgca atattaagtg taaatacggg atctgttggt tttgataatt
     6841 ttgcattttc catttaaacc acaattaatc gataaaaaag attgcaaaat tacttatatt
     6901 ttacttcagt ttaaaagttt ttttctattc gaagtaccgt tttttgtttc aaaggaacaa
     6961 gtacgttttt tccatattga attatctcaa cttgcttatt tttttattta ttaacgtcaa
     7021 agtagtgttt attacaaacc ttacattcat taacacaagt tcattttaaa aaaatagtta
     7081 gagaatcatt tttctatttg ttccaaagtt ttttattcgt ctcccgaagt cgatgcgaca
     7141 ttttttctaa aagtcgatac acgatggcag gatctttttg tattgtttta caaaaattcc
     7201 ttttatcaat agttaatact tttgtatccc ctaatcctca aacggtgcaa gaccgaacat
     7261 ccttttcaaa cagtcccatt tcgctaaaaa attccgattt tccaagttca gcaagtttaa
     7321 tttctttatc accagattca tcaataatct ccacctttcc ctgttgaata acgaacaagt
     7381 aatcgcctga atctccttgt ttaatgatgt tttcaccatt tgcataaggg cggcccaatg
     7441 tgttactttt tctaaatttc atatttatta tattttatca tcctaagcat agctcgaatc
     7501 gtattccatg atagtataac tataactccc ggatttaaga acctcaggaa aatatcttta
     7561 taaggagcac taccggtaaa tgtatcccaa aggatagagc tcaattttct tacatgtctt
     7621 tcttttagtt gctcattaac aaccatcctg agcattgcgc ttttcaatac cggcgatgcc
     7681 tggataacag ttgttaccat gaaaataaac ttgccaatag tgttatctat ttccagatta
     7741 ttacatgttg gttgaaaatg ttttttaaag ttttctttgg atattccttg aaatattgca
     7801 gtattagcgg cagccttagc tgttatataa gcagctccga ttccattctt atataattta
     7861 gatgcggaag aatcaccaat gagcacaacc cggtcagaat aggcagattt agcacttcca
     7921 acattaatat aaggaaaaca tcgacatgtt atgttactat caagatcgaa gtctttagga
     7981 aaacactttc taactggttt ggaatcaaga aattttcctg ctatttcttt atcaatattt
     8041 gaacctaaca atacaagcgt aacatattta gattttggta ttaaggctcc aaatttaata
     8101 ttgggtaaac taagaagaaa aacatgcata gaattgccaa aatacttatc aatttgtgct
     8161 tcatccatat gaatctcaca aataaaagtg cacgttgttt ttggaggaac aaaagaggga
     8221 ctaattttac taaataattc aaaagttttt ttattaaggc ctacagcccc aacaacaaga
     8281 tcatattttt tttcaaagtt atttttagtt ttaattataa ctccattctc atttctttcc
     8341 atgtttagta ccctatcatg gataatattt gcccccttca atgcacataa ttccataagg
     8401 tgatcatcga aacttttgtg atcacctagg ctacatcctt ttggtcccag tcctcgaaac
     8461 atagaggcaa ttctttgttc atcaacaggg gctccaattt cagtgaagcc ctgctcaaga
     8521 tgaagcgtat aggtttctat ccctttcctg ataacatccg caggtagaac aattccgtca
     8581 gcagataaca tttggattaa tgattcggaa acaatccccc cgcaattatt gcatccggca
     8641 ggccctgcgc agttgaaatc cttcgcctca atgacatcaa tattaatatt caaaccgtat
     8701 ctctctgcaa aattcagagc aaaatatgta aaaaaactac ctgatggacc acctccaata
     8761 acggctatat tagagccctc ttttagtaca agtttatttg cagcattatc ttccacaaaa
     8821 ttttatttcg ttaaaagctt catgattaag tttccatatt caatcctagc atatctcaat
     8881 tagatttgtt tttgttcttt tatccttaca gtattcttat caaatataat tactattttt
     8941 aatatcactt ctatgcaatt ttctttaaaa atttgaaaag caataattat ttattgaaga
     9001 aattcaaaaa tacttcaaaa attatcataa catgatatta gtaatgacca tgagatttca
     9061 tccaaatata atttgtattt ttctcatttc agtattgatt tatttaataa aaaaatatcg
     9121 acaagagtat ttctcaggtt ctgttttatc cgatcatttg tgcatttcta aaataaatta
     9181 caatcagatt aattaatccc aatatttctg ttgctttagt tattcaaatg accatctaag
     9241 taaagcctat tttgaacaaa tgtaaaaagt aatgatgaaa atattggggg gaaggtatac
     9301 tgatagccga atgattgtta attaagccct atgtttgacc aacaatgctt gatacttttt
     9361 ttcat
//
LOCUS       DASCQP010000004         2104 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000006365, whole genome shotgun sequence.
ACCESSION   DASCQP010000004 DASCQP010000000
VERSION     DASCQP010000004.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2104)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2104)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2104
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000006365"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..824
                     /locus_tag="QF480_00085"
     CDS             <1..824
                     /locus_tag="QF480_00085"
                     /inference="COORDINATES: protein motif:HMM:NF021134.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016758 - hexosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase 87 family protein"
                     /protein_id="HJN04989.1"
                     /translation="NIILLGALILVVHFQRELHLGQVNQILLVLYLLAAYLFEKDKAL
                     LFSVVLAVSIFFKPFGLIFIPYLIVKGKYKETLYYVLITIALFFLPLFFYSIDEFISQ
                     NALWINELVVELGNKQNILQSANHTVFSVIVRFTPLCLISFTPAIVKVYQLSVLVIIG
                     LLVLLFINKGRKIESNTIADFALLISLIPLLSFTSQNAFGFAGLLVFLLLINFKGFSF
                     TEKVTTIIGFVFLGGNYNDIWGSSLSAFFNDISLVSLGTILLIIILFRKRYQGIL"
     gene            complement(887..2023)
                     /locus_tag="QF480_00090"
     CDS             complement(887..2023)
                     /locus_tag="QF480_00090"
                     /inference="COORDINATES: protein motif:HMM:NF012656.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJN04990.1"
                     /translation="MNPEEHKMGIKGSSTRQIFFNDVKVPVENLLGKRGIGFRIALNI
                     LHIGRIKLGATVIGGMRRAINNSVTYANERKQFNMFLSEFGAIKYKIAEQIIKMFATE
                     SAVYRASKDMEDSIESLLEQGSTYGEANIEGVAEYEPECALLKVYGSEALDYIVDEMV
                     QIYGGMGFSSEAPADRSYRDSRINRIFEGTNEINRLITVDSTMKKGMKHKIDLFEAAN
                     AVLNNFDKIVGVDLSEGDYYKAKHAFVNNLKTAVLMLLPVIQDTFKRQLVFEEEVLMN
                     ISDMMMDVYVLESTLLRVEKLEKNNLKPNISVYKDILDVLTQDIANTVYKSGFDAIGS
                     FTKGTQKKLLSEALDTLTKTYSVNVKEARRRIAGKVIEDEVYKF"
BASE COUNT          642 a          369 c          319 g          774 t
ORIGIN      
        1 ataacataat attattagga gctttaatcc tcgttgttca ttttcagcgc gaattgcatt
       61 taggtcaggt taatcagata ttgttagttc tttatttatt ggctgcatat ttatttgaaa
      121 aggataaagc attgttattt tcagtagtat tggcagtaag catatttttc aaaccatttg
      181 gtttaatttt tattccgtat ttaattgtta agggtaaata taaagagaca ttatattatg
      241 ttttaattac cattgcactt ttctttcttc cattgttttt ctattcaatt gatgagttta
      301 ttagccaaaa cgcattatgg atcaatgaat tagttgttga attaggaaat aaacaaaaca
      361 tattacaatc agctaaccat acggtatttt cagtgattgt aagatttacc ccattatgtt
      421 taatttcatt cacacctgcc attgttaaag tataccagct atctgttttg gtgataatcg
      481 ggttactagt actattgttt atcaataaag gaaggaaaat agaaagtaat actattgcag
      541 attttgcgtt attaatcagc ctaattccgt tattatcatt tacaagtcaa aatgcatttg
      601 gtttcgcagg attgttggtc tttttattgt taataaattt caagggattt tcatttactg
      661 agaaagtaac gacgattatt gggtttgtat ttttaggtgg aaactataat gatatatggg
      721 gttctagtct gtcagcattt tttaatgaca tttctctagt gtcattggga actattttgt
      781 tgataattat tctttttaga aaacgatatc agggaatatt ataaaaaaat gcctgagatg
      841 gaacaaatca ggcagcttct ggattaaaat tttaacgatc cataatttag aatttgtata
      901 cttcatcctc tataacttta ccagcgattc tccttcttgc ttctttaaca tttaccgagt
      961 aagtttttgt taaagtatct agcgcttcac taagcaattt cttttgagta cctttagtaa
     1021 aggaaccaat tgcatcaaat cctgacttat aaactgtatt tgctatatcc tgagtaagaa
     1081 catccagtat gtccttgtaa acggaaatat taggttttaa gttgtttttt tcaagttttt
     1141 caacacgtaa caaagtggat tctagaacat acacatccat catcatatca gagatattca
     1201 taagcacttc ctcttcaaac accagttgcc ttttaaaagt atcctgaatt acgggaagta
     1261 acattaaaac agccgttttc agattattaa caaatgcatg ctttgcttta taataatctc
     1321 cttccgacaa atcaacacca acaattttgt caaagttatt aaggacagca ttcgcagctt
     1381 cgaatagatc aattttgtgc ttcattcctt ttttcattgt tgaatcaaca gttatgagtc
     1441 tgtttatctc atttgtgcct tcaaagattc tgttaattct tgagtcacga taggatctgt
     1501 ctgctggagc ttcagaagaa aatcccattc ctccatatat ctgtaccatt tcatccacaa
     1561 tataatctaa agcttcggag ccatatactt taagaagagc acattcgggc tcatactcag
     1621 caactccttc aatattagct tcaccatagg tacttccttg ctcaagtaaa ctctcgatac
     1681 tatcctccat atctttactt gcacggtaaa cggcagattc agtagcgaac attttaataa
     1741 tttgctctgc tattttatat ttaatggcac caaactctga taggaacata ttaaactgtt
     1801 tacgctcatt agcatatgta acagagttat tgatagcacg cctcattcct ccaataactg
     1861 tagctcctaa ttttatgcgg cctatgtgaa gtatatttaa agcaattcta aaaccaatac
     1921 ctcttttacc aagcagattt tcaacgggta cttttacatc gttaaaaaat atctgacgag
     1981 tagaggaacc ttttattccc attttatgtt cttcagggtt catgggttct cgacccaatg
     2041 ttaatctcca aactttagca cgtcagccat tttttgtacc tgaaaccaag cccattgatg
     2101 attt
//
LOCUS       DASCQP010000005         1886 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000006982, whole genome shotgun sequence.
ACCESSION   DASCQP010000005 DASCQP010000000
VERSION     DASCQP010000005.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1886)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1886)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1886
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000006982"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1144)
                     /locus_tag="QF480_00095"
     CDS             complement(<1..1144)
                     /locus_tag="QF480_00095"
                     /inference="COORDINATES: protein motif:HMM:NF026220.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YCF48-related protein"
                     /protein_id="HJN04991.1"
                     /translation="MKKIITYLVLIFVFIGNLANAQQNGWVSITTPTSFILFDISFPP
                     GQSDIGYAVGMSSTYNGDGVILKTTDAGNTWVEISTGTIPGLEAVCFTDVNTGYAGGW
                     QNYFIKTTDGGVTWTTQIIDPGIWYFRDIEFWDTNNGVAATADPDIYVTSDAGATWTL
                     ATGLSQNIQAVTYADASTLFVVGGDEKISKSTDGGQTWSSIYTGTFQYMFMGVEFLNA
                     NYGMVMGEDGKVMITSDGGSNWTNTNAGGYGLMRGAHIFNTDSAYVCGTPEELYKTLN
                     GGTNWNSVWTGSNAAFYEVKFTDDNIGFVCGSQGTMLKNEPPFTADFSASTDTVCVGN
                     TVDFTDLSAGGPTSWSWTFEGGTPATSTDQNPTITYNTAGDFDVTLE"
     gene            complement(1162..1314)
                     /locus_tag="QF480_00100"
     CDS             complement(1162..1314)
                     /locus_tag="QF480_00100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN04992.1"
                     /translation="MNKNKDKNQSNTSHTKKLEEVIRQKQTESEALKKLMVSLENTEK
                     KKTKNK"
     gene            complement(1519..>1886)
                     /locus_tag="QF480_00105"
     CDS             complement(1519..>1886)
                     /locus_tag="QF480_00105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN04993.1"
                     /translation="SPTLHYCCLHQISHHSNQNQKILTELIKELESNSTMISWEEFEV
                     RFQEVYTGYYTKLNTKFPDLTPNELRLCAFFRLNMTTKEIAAITYQSTNSIVVARYRL
                     RKKLGLEKEENLVGFLSKI"
BASE COUNT          554 a          371 c          320 g          641 t
ORIGIN      
        1 cttcaagagt gacatcgaaa tcacctgcag tattgtatgt tatagttggg ttttgatctg
       61 ttgaagttgc cggtgtccca ccttcaaacg tccaactcca tgaggttggt ccaccagctg
      121 aaagatcggt aaagtcaact gtatttccca cacaaacagt gtcagtgcta gccgaaaaat
      181 cagcagtaaa aggtggttcg tttttaagca ttgttccttg cgaaccacaa acaaaaccaa
      241 tattatcatc tgtaaatttt acttcgtaaa aagcagcatt acttcccgtc caaacagaat
      301 tccagtttgt tccaccattt agagttttgt atagttcttc tggagtacca cacacataag
      361 cactgtcagt attaaaaata tgagcacctc gcattaaacc gtagcctcct gcatttgtat
      421 ttgtccagtt tgatcctcca tctgaggtaa tcataacctt gccatcttct cccatcacca
      481 taccatagtt ggcatttaaa aattcaacac ccataaacat atattgaaat gttccggtat
      541 agatactgct ccatgtttgt ccaccatctg tagatttact gattttttca tcacctccta
      601 ctacaaataa agtactcgca tccgcataag ttacagcttg aatattctgt gataaccctg
      661 ttgccaatgt ccaggttgct ccagcatctg aagtaacata aatatcagga tcggcagtag
      721 cagctactcc gttattggta tcccaaaatt caatgtccct aaaataccaa atacccggat
      781 caataatttg agtagtccac gtgacccccc catccgtagt ttttataaaa tagttctgcc
      841 aaccaccagc ataaccggtg tttacatcag taaagcaaac agcttcaagg ccaggaatag
      901 ttcccgtaga aatttctacc cacgtattac ctgcatcagt cgttttcaga atgacgccat
      961 caccattata agttgaactc atcccaacag catagccaat atcactttgt cctggaggaa
     1021 agctgatatc aaacaatata aaactagttg gtgttgttat ggatacccat ccattttgtt
     1081 gtgcattggc caggttgcca ataaacacaa atattaatac taagtacgta ataatttttt
     1141 tcatgattca gttttttaag attatttgtt tttggttttt ttcttttctg tattttctaa
     1201 tgacaccatt aacttcttta gtgcttcgga ttcggtttgt ttctgacgaa tcacttcttc
     1261 gagttttttt gtatgcgaag tattactttg atttttatcc ttattcttat tcataatctt
     1321 tatttcattt ttgaaatgca aagaaaggga tgatgtaaat gataatcata gcttaactct
     1381 ttacttatta tatactgagt gattacaaac tatatacaat aggatgtaat tgacaggata
     1441 tcagcaagaa aggcttgggg attttacagg agcaacgatt ctgaattgtt aaattgttgt
     1501 ttaggatacc tggaagaatt atatcttaga taaaaaacct acaagatttt cttctttttc
     1561 gaggcccaat ttttttctga gtcgatatct ggctacaact atgctattgg ttgactggta
     1621 agtaatggca gcaatttctt tggttgtcat gtttaacctg aagaaagcgc acaatcttaa
     1681 ttcattgggg gttaagtcag gaaattttgt attcagtttt gtgtagtatc cagtatatac
     1741 ttcttgaaac ctaacttcaa attcttccca cgatatcatc gttgaatttg actcaagctc
     1801 tttaatgagt tcggtgagaa ttttttggtt ttggttacta tgatgtgaaa tttgatggag
     1861 gcagcaataa tgaagcgttg gactat
//
LOCUS       DASCQP010000006         2437 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000010707, whole genome shotgun sequence.
ACCESSION   DASCQP010000006 DASCQP010000000
VERSION     DASCQP010000006.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2437)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2437)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2437
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000010707"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1427)
                     /locus_tag="QF480_00110"
     CDS             complement(<1..1427)
                     /locus_tag="QF480_00110"
                     /inference="COORDINATES: protein motif:HMM:NF008872.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-4-keto-pentose/UDP-xylose
                     synthase"
                     /protein_id="HJN04994.1"
                     /translation="MDLSAIICQKKILSSTDWKVYGMDMSSDRLTDLLEIDNFNFFEG
                     DITINKEWMEYHIKKCDVILPLVAIATPSTYVNDPLKVFELDFEANLPIVRKCVQYRK
                     RLIFPSTSEVYGMSNDSEFNPYSTEIVLGPIHKSRWIYSCSKQLMDRVIHAYGEKEGL
                     DYTLFRPFNWYGTGLDSIYTPKEGSSRVITMNSDIKKVYENNDKRGLLHKELFIPSAN
                     SILFQKNDDQIEAQGQVPEYVFLDKQPIFIENTDNALLLDFQETFDKQFLKQNSIRYI
                     TIRNDVAHHHWKQPHNYLKAVQKVLDSSFKKVYDSEIASTYLVKDFIPAFYICREDDY
                     TFNTLAEINDYGICTIDLSSVDDLDLVANLTQQEQPSFVEYTKISPVEYRVNIKGIKR
                     NSYFLLRFFQKYDSLWDLVPLKPEQKMEINSVDSQSFVKVNKHDGMDIENYKSFDLTR
                     PDGGNFVSKSFYNSVQNDNITGNKE"
     gene            complement(1516..>2437)
                     /locus_tag="QF480_00115"
     CDS             complement(1516..>2437)
                     /locus_tag="QF480_00115"
                     /inference="COORDINATES: protein motif:HMM:NF025017.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HJN04995.1"
                     /translation="VPYIQALTGHEWELFIIPNNVEENEWPKDERISIIDSGRVGPAD
                     KRDLGAQKVSGDILVFLDDDSYPESNILEVANEYFTDPSVIAVCGPGITPPSDGFWQK
                     VSSAVFLSKLTGGAPERYMSVGQAREMDDWPSVNLMVRRGVFLLVGGFDCQYWPGEDT
                     KLCLKLKKTGKKLIYAPDMIVWHHRRSGILLHLKQIGAYGLHRGFFARHYPETSFRLK
                     YFAPSVFSVLVIATAMIKWLPSELYYIYSLLWLIYGFILLLGFIQILRYERFLITLIA
                     SVFYVPLTHFYYGIQFIRGFFKEELISKLR"
BASE COUNT          784 a          470 c          363 g          820 t
ORIGIN      
        1 ttttctttat taccagttat gttatcgttc tgtaccgagt tataaaaact cttagataca
       61 aagttaccgc catcaggtcg cgttaaatca aaagatttat aattttcgat atccattcca
      121 tcgtgcttat ttactttaac aaaactttga ctatcgactg aattaatttc cattttttgt
      181 tctggtttta atggaaccag gtcccataaa ctatcatact tttgaaaaaa acgtaacaga
      241 aaatagctgt ttcttttaat gcctttaatg ttaaccctgt attccacagg cgatatcttg
      301 gtatactcaa caaatgatgg ttgctcttgt tgtgtaaggt tggcaactaa atctaaatca
      361 tcaacactcg aaaggtctat agtacaaata ccgtagtcat taatttcagc taaagtattg
      421 aaagtatagt catcctctct gcaaatatag aaggcaggaa taaaatcttt aactaaatat
      481 gttgaagcaa tttcggaatc atatactttt ttaaaggatg agtctaaaac tttttgaacg
      541 gcttttaggt aattgtgtgg ctgtttccag tgatgatggg caacatcatt cctgatagtt
      601 atatatctaa tactattttg ctttaaaaac tgcttatcaa aagtttcttg aaaatctaat
      661 agtaatgcat tgtcagtatt ctcaatgaaa ataggctgtt tatctaaaaa gacatattcg
      721 ggaacttgtc cttgggcctc aatctgatca tcattttttt ggaaaagaat agagttggcg
      781 ctaggaataa atagttcttt atgtagtaag cctcttttat cattattttc atatactttt
      841 ttaatatcac tgttcatggt aataactctt gagctaccct ctttgggtgt atagatactg
      901 tctagaccag ttccatacca gttgaaagga cgaaataatg tatagtccaa gccttctttt
      961 tccccatatg catgtattac tctatccatt agctgcttcg aacaggaata tatccacctt
     1021 gatttatgaa ttggacccaa cacaatttca gtgctataag ggttgaactc gctatcattg
     1081 gacattccat atacttctga agtggaaggg aaaatcaatc ttttcctata ttgaacacac
     1141 tttcttacaa taggaagatt tgcctcaaag tccagctcaa atacttttaa ggggtcatta
     1201 acatatgttg aaggtgttgc tattgcaacc aaaggaagga tcacgtcaca tttttttata
     1261 tggtactcca tccattcctt atttattgta atgtccccct caaaaaaatt aaaattatct
     1321 atttccaata agtctgtaag tctgtcagag ctcatgtcca ttccataaac tttccaatca
     1381 gtacttgaaa gtattttttt ttgacaaatg atggccgata aatccattta ctccgagaat
     1441 taatatcttc atttatattt tcctataatt tattacatta aataatttag caatttctaa
     1501 ttgatagaaa tttaatcaac gtaatttgct aatcaattct tctttaaaaa aacctcttat
     1561 aaattggatt ccataataga agtgggttaa gggaacataa aatacgcttg ctattaatgt
     1621 aatcaaaaac ctctcgtatc tcaaaatttg aataaacccc aatagcaaga tgaatccata
     1681 aattaaccat agtaagctat aaatataata tagttcacta ggtaaccatt ttatcatcgc
     1741 agttgcaatt actaaaacag aaaataccga tggagcaaaa tattttaacc taaacgaagt
     1801 ttctgggtaa tgacgggcaa aaaaacctct atgaagtcca tatgctccta tctgctttaa
     1861 atgcaataaa attccagatc tgcgatgatg ccaaacaatc atatcaggtg cataaattaa
     1921 tttctttccg gtcttcttta gttttagaca aagttttgta tcctcgcctg gccaatattg
     1981 acaatcaaac ccacccacta ataaaaaaac accccttcta accattaaat ttactgatgg
     2041 ccaatcatcc atttctcttg cctggcccac tgacatatat ctctcaggcg caccaccagt
     2101 taatttacta agaaaaacag cactggatac tttctgccaa aaaccatcac tcggcggagt
     2161 gatgcctggg ccacacaccg ctattacact agggtctgta aagtactcat ttgccacttc
     2221 aagaatattt gattcagggt aggaatcatc atccaagaaa actagaatat ctccagacac
     2281 tttctgagcg ccaaggtcgc gtttatctgc agggcccact ctgcctgaat ctattattga
     2341 tattctttcg tctttaggcc actcattttc ttcaacattg ttggggataa tgaacagttc
     2401 ccattcatgc cctgttaatg cttgtatata aggcaca
//
LOCUS       DASCQP010000007         1821 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000012656, whole genome shotgun sequence.
ACCESSION   DASCQP010000007 DASCQP010000000
VERSION     DASCQP010000007.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1821)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1821)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1821
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000012656"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..979)
                     /locus_tag="QF480_00120"
     CDS             complement(<1..979)
                     /locus_tag="QF480_00120"
                     /inference="COORDINATES: protein motif:HMM:NF014385.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HJN04996.1"
                     /translation="MEDEIIDDWLKENAPLPPRKITFLGGNDFAVKSNAAIYQPLTQL
                     TSINTGRKVAELDVEISKLNYDDVKSQIRLGVKELFYGILIQDAKVNEASQELEYKKA
                     EYQDAVNAYEAGEMLLLDVTSAKAEIFEAEQDLLNEENLKDQYIFSFNQLIGAQYSYK
                     PDLELPTLGFEPVGGIQEYYTQGSEKNYGLKIALANLDKSELGITAAKKAYIPELSYF
                     AQYYYNYGIPLYASQYLLTGLNFKWTLIDFGERSSVVKQRNAIYNEALDNLEYKKLTL
                     QGEIQQAYRNISYAESLILTALKAYEAREEELILTINAVEAGEALSSMMY"
     gene            complement(989..1270)
                     /locus_tag="QF480_00125"
     CDS             complement(989..1270)
                     /locus_tag="QF480_00125"
                     /inference="COORDINATES: protein motif:HMM:NF014385.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HJN04997.1"
                     /translation="MNAILKIYLLIIFFSFSVNLTSQVTGKLTLDEAVEMALNENKLI
                     KISQQRIIGSEAKLSEMKSNYFPRIVLESVGAYNSDPNLYINKGQLNNL"
     gene            complement(1281..>1821)
                     /locus_tag="QF480_00130"
     CDS             complement(1281..>1821)
                     /locus_tag="QF480_00130"
                     /inference="COORDINATES: protein motif:HMM:NF013069.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HJN04998.1"
                     /translation="EYGGVVKSKNKTFGEMVIALIISLVAIFIILLFVFKDIKRPLII
                     MISIPLTLFGSMLGLLITGNVFSFTAFVGLIALVGIVIRNGVIMVEYSDELVETEGLS
                     RNDAALESAKRRLRPIFLTTMAAAIGVVPMIVLKDTLWAPLASVFAFGIVFSMIINFM
                     VLPVFYAWFIKSSKSIENK"
BASE COUNT          569 a          355 c          263 g          634 t
ORIGIN      
        1 tatacatcat tgatgataat gcttctccag cttcaacagc atttatggta agtataagct
       61 cttcctctct tgcctcgtat gcctttagtg ctgttaatat taaagattca gcataactaa
      121 tatttctata ggcctgttgt atttcacctt gtaaagtaag ctttttatat tctaagttat
      181 ccaatgcttc attgtagatg gcatttcttt gcttaacaac agaagatcgc tctccaaaat
      241 caatcaacgt ccacttgaaa ttcagtcctg taagtaaata ttgactcgca tacagaggta
      301 ttccataatt ataataatac tgagcaaaat aggataattc tggaatgtac gctttcttgg
      361 cagctgtaat tcctagctca gatttatcaa gatttgcaag cgcaattttt agtccatagt
      421 ttttttcaga gccttgtgta taatattctt gtattcctcc tactggttca aagcctagtg
      481 tgggtaattc taaatctggt ttataagaat attgagcacc tattaactgg ttaaaagaga
      541 agatatattg gtcctttaga ttctcttcat ttaatagatc ctgctcagct tcaaaaattt
      601 ctgctttagc agatgtaaca tccaggagta gcatttcacc tgcttcataa gcattgacag
      661 catcttgata ttcggccttt ttatattcaa gttcttgtga agcttcatta acttttgcat
      721 cctgaatcag gattccataa aacaattctt ttacaccaag tcttatttgt gattttacat
      781 catcatagtt taacttactt atctcaacat ctaactctgc aactttcctg cccgtattaa
      841 tcgatgtaag ttgggttaaa ggttgataaa tcgcagcatt tgattttact gcaaaatcat
      901 tgccccccag aaaagtaatc tttcgtggag gaagtggtgc gttttccttt aaccaatcat
      961 caataatttc atcctccaca agctgatctt atagattatt taattgcccc ttattaatgt
     1021 ataggtttgg gtcactatta taggcaccaa cactttctaa aacaattctg ggaaaataat
     1081 tgcttttcat ttcacttagc tttgcctcac tacctatgat acgttgttgg gatatcttta
     1141 ttagtttatt ttcatttaga gccatttcta ctgcctcatc aagggttaat ttacccgtaa
     1201 cctgagaagt taggttcaca gaaaaactaa aaaagataat tagtaaatat attttcaaaa
     1261 ttgcattcat aaagagtgct ttatttattt tcaatacttt ttgatgattt tataaaccat
     1321 gcatagaata ctggtaaaac cataaaatta attatcattg agaatactat tccaaacgca
     1381 aaaacacttg caaggggagc ccaaagtgta tcctttaata ctatcattgg aacaacgcct
     1441 atggccgcag ccattgtggt tagaaatatt ggtctcaatc ttcgtttggc agattcaagc
     1501 gcggcatcat ttctagacaa gccctccgtt tcaaccagct catcactata ctctaccata
     1561 ataactccat tacgtatgac aattccaacc aatgcaatca gacctacaaa agcagtaaag
     1621 ctaaatacat tacctgtgat tagtagaccg agcattgacc caaatagtgt tagaggtatt
     1681 gaaatcatta ttattaatgg tcgctttata tctttaaaaa caaacaataa aataataaaa
     1741 atagctacta agcttattat caaagctatt accatttctc caaatgtttt attcttactc
     1801 ttaaccacac caccgtattc c
//
LOCUS       DASCQP010000008         1781 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000015756, whole genome shotgun sequence.
ACCESSION   DASCQP010000008 DASCQP010000000
VERSION     DASCQP010000008.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1781)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1781)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1781
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000015756"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..855
                     /locus_tag="QF480_00135"
     CDS             <1..855
                     /locus_tag="QF480_00135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN04999.1"
                     /translation="YALLPERFRFSRALILLGTLWGIIILPLIRLLLHATKVSGIQIG
                     NDINKRFVIIGDPTEATRVAGLLKKSYIKPDFVGLVSSSENLNDDSTFIGSITQVVDI
                     IRIYNIDEVIFCSKSISHQRIIDKMTAWQVARVDYKIAPEDSLSIIGSNSIHTRGELY
                     TVDINAVDGMANRRNKRLLDIFLSLVFLAFYPIIVLIQKKPISTLKNIFKILWGSMSW
                     VGYYPLYEQLHHLPNIRKGVLNPVDSIKFKHPDDETIRQLNLLYARDYNLWKDLNIIL
                     FAFRELGK"
     gene            852..>1781
                     /locus_tag="QF480_00140"
     CDS             852..>1781
                     /locus_tag="QF480_00140"
                     /inference="COORDINATES: protein motif:HMM:NF024579.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HJN05000.1"
                     /translation="MSLISSILIRQYPLIGMIFRITPFIKLCKNLTLLTILLFLTSNI
                     ADAQEYKLSSKDKKAISYYNHAATHYKNNNHNETIKYLNLSIERDANFIEARLLLGDI
                     YSDLKRYDDAIREYNIALAIDSALFPPVYYFLANIYYKTGEYNNSILNYNKLLKFNSI
                     SKELRALATEKLIFADTAFKLISNPVKTNPINIGFPINTSNDEYINYVNTDYDLLMLT
                     KRVKQPAFSSKRYKEDLYYTAHSNASWSVPQVVALRWRDDERNMGTINFSTDGRTMFF
                     TGCYWPSGKGGWDLNFSERLGNGWLTPHSIGNDI"
BASE COUNT          598 a          291 c          310 g          582 t
ORIGIN      
        1 tatgcattgc ttcccgaacg atttagattt tcacgagcat taatattatt gggaaccctt
       61 tggggcatta ttatactgcc tttaataaga cttttgttgc acgctacaaa ggtttcggga
      121 attcagattg gtaacgatat caataagcgt tttgttataa ttggtgaccc tacagaagca
      181 acaagagtag ccggtttatt gaaaaaatca tatataaaac ctgactttgt gggtcttgta
      241 agtagcagtg aaaatcttaa tgatgacagt acgtttattg gaagtattac ccaggttgtt
      301 gatattataa gaatatacaa tattgatgaa gttatttttt gctcaaaaag tatttcacat
      361 caacgaataa ttgacaaaat gactgcatgg caagttgcca gggttgatta taagattgct
      421 ccagaagaca gtctgtctat tatcggtagt aattctatcc atacccgcgg agaattatat
      481 actgttgata ttaatgccgt tgatggtatg gcaaacagaa gaaacaaacg acttcttgat
      541 attttcctca gtttggtctt tcttgcattt tacccgatta tagtgttaat tcaaaagaaa
      601 cctattagta ctctgaaaaa tatctttaag atactatggg gatccatgag ttgggttgga
      661 tattatcctc tttatgaaca attacaccac ttaccgaata tccgtaaagg tgtactcaat
      721 cctgttgatt caataaagtt taaacatcct gacgatgaaa ctatacgtca attaaacctc
      781 ctttatgcac gtgactataa tctgtggaag gatttgaata ttattttgtt tgctttcagg
      841 gaattgggaa aatgagtctc atatcatcaa tattaattag gcaatatccc ttaattggaa
      901 tgatattcag aataacgcct ttcataaagc tttgtaaaaa tctgactcta ctaacgatac
      961 ttctattttt aacttccaat attgctgatg ctcaggaata taagttatct tccaaagata
     1021 aaaaagcaat tagttattac aatcacgcag caactcatta taagaacaac aatcataatg
     1081 aaacaattaa atatcttaac ttatctatag aacgcgatgc aaatttcatt gaagcaaggc
     1141 tattattggg agatatttat tccgatctta aaagatacga tgacgcaata agagagtaca
     1201 atattgctct tgcaattgat tcagctttat ttccacctgt ttattacttt ttagcaaata
     1261 tatattacaa aaccggggag tataataatt ctattcttaa ctacaataag ttacttaaat
     1321 ttaattctat atctaaagag ctaagagcct tagctacaga gaaattaata tttgccgata
     1381 ctgcgtttaa acttataagc aacccagtaa aaacaaaccc tattaacatt ggatttccaa
     1441 taaatacatc taacgacgag tacataaatt atgttaatac tgattatgat ctgttaatgc
     1501 taaccaaacg cgttaagcaa cctgcatttt cgtctaagag gtataaagaa gatctgtatt
     1561 atactgctca ctccaatgca agctggagtg ttcctcaagt tgtagcacta agatggagag
     1621 atgatgagcg gaatatgggc acgataaatt tcagtactga tggaagaact atgtttttta
     1681 ccggttgcta ttggccgtca gggaaaggag gatgggattt aaatttctcc gaacgtcttg
     1741 gtaatggctg gcttacgcca catagtattg gtaatgacat c
//
LOCUS       DASCQP010000009         1848 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000021273, whole genome shotgun sequence.
ACCESSION   DASCQP010000009 DASCQP010000000
VERSION     DASCQP010000009.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1848)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1848)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1848
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000021273"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..731
                     /gene="tilS"
                     /locus_tag="QF480_00145"
     CDS             <1..731
                     /gene="tilS"
                     /locus_tag="QF480_00145"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: protein motif:HMM:TIGR02433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016879 - ligase activity, forming
                     carbon-nitrogen bonds [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HJN05001.1"
                     /translation="EEIYPGSENAINKSIDNLRDSDLLMRSIINEKKQQFFSSNTGEK
                     VKIDLKELQKLSPIRIWLYYLLNKFGFTRKITDAVCLSLENENSTGHKFSSFKYELLI
                     DRDYLIIRKITEKFSSKKYAISNEQSKVIEPINLIIERHKNSHEFVFSNKNNVAYFDS
                     EKLTFPLFLRKWKYGDKMVPFGMKGSKLISDILIDNKVDLFVKEDTYVVISAGKILWL
                     VGIRSSNEFRITKSTKKILKMELC"
     gene            847..>1848
                     /locus_tag="QF480_00150"
     CDS             847..>1848
                     /locus_tag="QF480_00150"
                     /inference="COORDINATES: protein motif:HMM:NF022853.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD family protein"
                     /protein_id="HJN05002.1"
                     /translation="MKHSITTIALLLLFTFGLNAQIFEPVTWSFSSNKINEKEYELLF
                     TANIDLHWHLYSQDIAMSPPATTFSFEQNNNYELIGDVVEESVVIEEYDPNFEMVLKY
                     FAHEAIFKQKVKLTGDGAVVKGFVDFMSCDDTKCLPPAEVDFDFTLGKSSPRGEQGSE
                     LIEQKTEIISTNTISSNESNDTWEPVIDQVKNFGTGGNTKGAKTWWYIFIAGFIGGLI
                     ALVTPCVWPIIPMTVSFFIKRSDNNRGKGIRDAMLYGFSIIVIYVSLGLGITLIFGAD
                     ALNALSTSAFFNILFFLLLVVFAAAFFGAFELTLPSKWTNAMDKRADSTTGILSIFFM
                     "
BASE COUNT          627 a          259 c          340 g          622 t
ORIGIN      
        1 ttgaagaaat ataccctgga tctgaaaatg caattaataa gagcattgat aatttacgcg
       61 attcagattt attaatgcgt tctatcatta acgaaaagaa acagcaattt tttagttcaa
      121 acacaggtga gaaagttaaa atagacttaa aggaacttca aaaactttct cctataagga
      181 tttggttgta ttatctactt aataaatttg gctttaccag aaaaattact gatgctgttt
      241 gtttatcact cgaaaatgag aatagtacgg gtcataaatt ctcttctttt aaatatgaac
      301 tactgattga tagagattat ctgattatta gaaagatcac agaaaaattt tcatctaaaa
      361 aatatgctat ttcaaacgag caaagcaagg tgattgaacc gataaatctg ataatcgagc
      421 gtcacaaaaa ttcacatgag tttgtcttca gtaacaaaaa caatgttgcg tattttgatt
      481 ctgaaaagtt aacatttcct ttgtttcttc gaaaatggaa atatggtgac aagatggtac
      541 cttttggaat gaagggcagt aagcttatca gtgatattct gattgataat aaggttgact
      601 tatttgtaaa agaagatacg tatgttgtga tttctgctgg gaaaatcttg tggcttgtag
      661 gaatcaggtc ttccaatgaa ttcagaataa ccaaatcgac taaaaaaata cttaagatgg
      721 aactttgtta atttttcgaa aaattggtca ggatttaaca aaagttatga ctatacaaca
      781 gatattgtaa gataaatcag tagaaatatt aactattttt gcaaaccaac tttaataagt
      841 ttaaatatga agcatagtat aacaacaata gcacttttat tgttatttac ttttggatta
      901 aacgctcaga ttttcgaacc tgttacgtgg agtttttcat caaataaaat caacgaaaag
      961 gaatacgaac tcttgtttac agctaatata gatcttcatt ggcatttata ttctcaggac
     1021 attgcgatgt cacctcctgc aacaactttt tcattcgagc aaaataataa ttatgaactt
     1081 ataggtgatg ttgttgaaga aagtgttgta attgaagaat acgacccaaa ctttgagatg
     1141 gttctgaaat actttgccca tgaagccatc tttaaacaaa aagtgaaatt aactggcgat
     1201 ggggcagtgg ttaaagggtt tgttgatttt atgagttgcg atgatactaa atgtttacct
     1261 cctgcagaag ttgattttga ttttactctg ggaaaatcgt cgccacgtgg agaacaagga
     1321 tcagagttaa ttgaacaaaa aacggaaatt atatctacta atacaataag ttctaatgaa
     1381 tcaaatgaca cttgggaacc tgttattgat caggttaaga actttggtac aggaggcaat
     1441 acaaaagggg ccaaaacctg gtggtacatt tttattgctg gttttatagg cggattaatc
     1501 gctctcgtaa ctccttgtgt atggccaata atacctatga cagtttcttt ctttataaaa
     1561 aggtcagata acaacagagg caaggggatt agagatgcaa tgttatatgg tttttcaatt
     1621 attgttatat atgtttcgtt aggtttagga attactctaa tatttggtgc tgatgcactg
     1681 aatgcgttat ctacaagtgc ttttttcaat attctatttt tccttctttt ggttgtattt
     1741 gcagctgcat tttttggtgc ttttgagctt acgctaccat caaaatggac taatgcaatg
     1801 gataaaaggg cggatagtac cactggcata ttaagtatct tctttatg
//
LOCUS       DASCQP010000010         2541 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000021766, whole genome shotgun sequence.
ACCESSION   DASCQP010000010 DASCQP010000000
VERSION     DASCQP010000010.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2541)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2541)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2541
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000021766"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..282)
                     /gene="ssrA"
                     /locus_tag="QF480_00155"
     tmRNA           complement(<1..282)
                     /gene="ssrA"
                     /locus_tag="QF480_00155"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            complement(458..1138)
                     /locus_tag="QF480_00160"
     CDS             complement(458..1138)
                     /locus_tag="QF480_00160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05003.1"
                     /translation="MSKSYIQTILREYLIYKLFNIITEKSFRVRLVNMNYIDSEDNVK
                     PFTRYAFLIEDIEVLASRNNSFVVKSENLRMRHINSASMIQLSMFQYMIGNVDWSITK
                     QHNVKLIKVNELREELPYAIPYDFDYAGFVNATYAINVQNPDISSVKTRMFVGICYTK
                     DEYQEIVKRFSEKKDEINTLINNFELLETKTKKRISNYINDFQKLIEQPDFYEKHVLP
                     LCKNFNSN"
     gene            complement(1588..>2541)
                     /locus_tag="QF480_00165"
     CDS             complement(1588..>2541)
                     /locus_tag="QF480_00165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018336280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HJN05004.1"
                     /translation="SDIPVIMISGHGTIDTAVEAIKKGAYDFIAKPPDLNRLLISVRN
                     AVDKKELVLQATQLKKEANYRYEIVGESESIISLREMIKKVAPTTARVLITGENGSGK
                     ELVARQIHEQSNRAKSPFIEVNCAAIPAELIESQLFGHEKGSFTSAIKQRKGDFELAH
                     GGTLFLDEIGDMSLNAQAKVLRALQENKIVRVGGEKEINVNVRIIAATNKNLKHEIEK
                     GNFREDLYHRLSVIIIEVAPLRERKDDIPLLVNRFIEDICNGQGRSPVTISGDAIEEL
                     KNFSWSGNVRELHNVVERMIILSTNGITKEDVLSYVKPLLI"
BASE COUNT          749 a          487 c          402 g          903 t
ORIGIN      
        1 ccttagtttc ttaatttcat cctgacttcg aaacatcgtc agaactaact caaaattgcg
       61 tgcgatccgt aatcaggccg gaattgagta tctccacctg cgaaccgtcc cgtcccgtca
      121 ccttgtgtcg ggatagagcc aatctactaa acttcgatta ggctgcgaga gcaaaattat
      181 tttcgccaat taaaaatgtt gtgtcaagga tttacgagct tgatcacatg gctcgacatg
      241 cttacttacc ctttcaactt gctgtcaaaa ccggtcagcc ccagatatca aagaacttta
      301 acttcttaat gaagtgtgca aatgtactta tataacagtt atctcaacta aatattttaa
      361 gtatgacgct tttcttagat gaatattgtg acacaaggat ttctaataat aatgaacaaa
      421 gtcaatattc atagtacatt atctaatcgt tttctggtta gttcgaatta aagttcttgc
      481 aaagaggtaa cacatgcttc tcataaaagt ctggttgttc tattagtttc tgaaaatcat
      541 taatatagtt actaatcctt tttttggttt tggtttcaag caattcgaag ttattgatta
      601 atgtatttat ctcatctttc ttctccgaaa atctcttaac aatttcctga tattcatctt
      661 ttgtatagca aatcccaaca aacattcggg tttttaccga gcttatgtct gggttttgta
      721 cgttgatggc atatgtagca ttcacgaatc cagcataatc aaaatcgtag ggaattgcat
      781 aaggaagttc ttcgcgtaac tcattcactt taattagttt aacattgtgt tgtttggtta
      841 tcgaccagtc aacatttcca atcatatatt gaaacataga aagttgaatc atagaagcac
      901 tattaatatg tctcattctt agattttcac ttttaacaac gaaactatta ttcctactag
      961 cgagtacttc aatatcttct attagaaatg catatcgggt aaagggtttg acattatctt
     1021 cagagtcgat gtaattcata tttactaaac gaacccgaaa acttttttcg gtaattatat
     1081 tgaacagttt ataaattaaa tattctctga gtattgtttg aatatagctt tttgacatgt
     1141 tgcaatgtgt aacaagtttt tgatttttaa cttgactcag atatggatca taacggaaca
     1201 catccttaag ttttaacttg ataggaggga agtaacaaat cttttttctc gatacgcctc
     1261 ttgctttaag gtgaatttct ttgtgattta tcccattctt atggtgtagt gttagtttag
     1321 caggtagttt atcaccgtca aacttttctt tcctgaactt tctaatatca aatgtaagtg
     1381 accagttaag taattcgtta gattggaaaa tttgaagatc atataataat gaatccctac
     1441 ctttgttatc atcctgcgat agcagaggat aaacaaacag tattataagt aaccctgtaa
     1501 gtttgtattt acttaatata aatatttaaa aatgaaactt catattataa ttgtctgtgg
     1561 ttaggtgtaa tcaaacctgt cttcctacta gattagtaag ggttttacat acgataatac
     1621 atcttccttc gtaatgccat tagtactcag gataatcatg cgttcaacaa cattatgtaa
     1681 ttcgcgtaca tttcccgacc aactaaagtt ttttaactct tcgattgcat cgcctgaaat
     1741 agttacagga gatcgaccct ggccgttaca aatatcctca ataaacctat ttacaagcag
     1801 tggaatatca tctttccttt cacgcaaggg tgctacctca ataataatta cgctcaatct
     1861 atggtatagg tcttcacgaa aatttccttt ttctatctcg tgtttaagat ttttatttgt
     1921 cgctgcaata attcgcacat tgacatttat ttctttctca ccacccactc ttacaatttt
     1981 attttcctga agggcacgta acactttcgc ctgagcattc aggctcatat caccgatttc
     2041 atcaagaaaa agagtgccac cgtgcgctag ttcgaagtca cctttacgct gttttatggc
     2101 tgaagtgaag gaacctttct catgtccaaa tagttgactt tcaatcaact cggctgggat
     2161 agcagcacaa tttacttcta taaatggaga ttttgcccga ttgctttgct catgtatttg
     2221 acgggccaca agttctttac ccgatccgtt ctcacctgtt atcaataccc ttgccgtagt
     2281 tggtgcaact ttttttatca tttcccttag tgaaatgata gattctgatt ccccaacaat
     2341 ttcatatcta taatttgctt cttttttaag ttgagtagct tgcaatacaa gttctttctt
     2401 atcaacagca tttcttactg aaattaacaa gcggttcaaa tcaggaggtt ttgcaataaa
     2461 atcataagca ccttttttaa tggcctctac tgcagtgtca atagtaccat gcccggagat
     2521 cataattaca ggtatgtcgc t
//
LOCUS       DASCQP010000011         3174 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000026338, whole genome shotgun sequence.
ACCESSION   DASCQP010000011 DASCQP010000000
VERSION     DASCQP010000011.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3174)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3174)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3174
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000026338"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            88..615
                     /locus_tag="QF480_00170"
     CDS             88..615
                     /locus_tag="QF480_00170"
                     /inference="COORDINATES: protein motif:HMM:NF020296.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA alkylation repair protein"
                     /protein_id="HJN05005.1"
                     /translation="MPKANKKEIVQWCWQAPQREYQLFAMELLGRSLKNESENILDLY
                     EYMIVTKSWWDTVDYIAINLVGGYFKKFPESIEKVTHLWMKSENMWLLRTCLLFQLKY
                     KSQLNTKLLHGFISELIQSKEFFIQKAIGWILREYSKTNPDFVINYVNKYDLPPLSKR
                     ETLLWMKNKGVIQRL"
     gene            complement(658..948)
                     /locus_tag="QF480_00175"
     CDS             complement(658..948)
                     /locus_tag="QF480_00175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05006.1"
                     /translation="MVYFSIYLLLSISVSLISLGKRISFIEIFYISLFLTPIVGFITV
                     LKAENNILTRHYTMTYTCTSCENGVVDNEKICPNCGEEMKVLNIKENKFKLA"
     gene            1269..2483
                     /locus_tag="QF480_00180"
     CDS             1269..2483
                     /locus_tag="QF480_00180"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HJN05007.1"
                     /translation="MKYYLLLRTFFMLFLGILVACNNVQTKTSEISISPIPEIKKEIF
                     HDPDSAVISKKAIELDNKFKRLVKTNGFNGTVLYAEKGRVILQKAYGYRNVRSKKEEL
                     TISDAFQLASISKMFSAMAIMILKNDGKVDYDENIITYLPDFPYEDVTLRLLMTHRAG
                     LPRYMSIAHSSWKNKKIPLNNDDMLDLFVEYKPDKYFSPNTGFHYCNTNYALLTNIVE
                     SVSGMHFENFVEERIFIPLEMENSFVYNMRQDTSVSLYVEEGVPGYYLRGWRWREMTN
                     EYLNGVMGDKNIYTSVGDLYKYDRALDNFTLLPEEIIAESFKRGNPSYWKRKNNYGFG
                     WRVKEDMDSTVFHFGWWKGFRTFYIREMKYQKTLIVLTNKDKGPGSSHFWNIIKADTL
                     PIGRTCEIKRQD"
     gene            complement(2497..2979)
                     /locus_tag="QF480_00185"
     CDS             complement(2497..2979)
                     /locus_tag="QF480_00185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05008.1"
                     /translation="MMVIIFKAGDTFARHSYYIVPFVPVMALIAGYGLAQIKNKKIAF
                     VVLLAISIDGILSQQHDFRIHDKEWAILNLEEDLDKVSLLEDLILINSGEYPTPMYFA
                     HRKGWVESNEKLVDEKYINNLKEKGLKYIVILKKAFGTNIDLDLPIVLDNNDYCIYQL
                     "
     gene            complement(2960..>3174)
                     /locus_tag="QF480_00190"
     CDS             complement(2960..>3174)
                     /locus_tag="QF480_00190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05009.1"
                     /translation="YFLLGKELYQGIINITNNLSSTLQNFYENAFNFIGFALFLFGLV
                     HVIIKKKQTTILCFCPEFLIHDGDYF"
BASE COUNT         1098 a          474 c          532 g         1070 t
ORIGIN      
        1 gtacatgcga aacctattcc ctttttttgg cattaatcac ctgaacggcg cgaaatttac
       61 aaagtcttta ttaggaaaaa tggacttatt ccgaaagcaa ataagaaaga aattgtacaa
      121 tggtgctggc aagctccgca acgtgaatac caactttttg caatggaact tctgggcaga
      181 tccttaaaaa atgaatctga aaacatcctt gacctttatg agtatatgat agttacaaaa
      241 tcatggtggg atactgttga ttatattgca attaatttag ttggagggta tttcaaaaaa
      301 tttcccgaaa gtattgagaa agttacccat ctgtggatga aatctgagaa catgtggttg
      361 ttaagaacat gccttctttt tcagttaaaa tataagtcac agcttaatac taagcttctt
      421 catggtttta tttcagaact gatacaatca aaggaatttt ttattcaaaa agcaattgga
      481 tggatattgc gtgaatattc aaaaacaaat ccagattttg taattaacta tgtgaataaa
      541 tatgatttgc ctccattaag taagcgtgaa actttactat ggatgaaaaa caaaggagtc
      601 attcagaggt tgtaattaaa agtggttata tacttcaatt ataatttatg atatacttca
      661 ggcgagtttg aatttatttt ctttaatatt taacactttc atttcttcgc cacaattagg
      721 acatattttc tcgttatcca ccactccgtt ttcacatgat gtacaagtat aggtcatagt
      781 ataatgacga gtaagaatat tattttcggc tttcaacacc gttataaaac ccactattgg
      841 ggttaaaaat aagcttatgt aaaatatttc aataaagctt atccttttgc caagggaaat
      901 aagtgaaaca gatattgata aaagtaaata tatactaaaa taaaccatag tggcttggtt
      961 ttgcttttcg cttttgtgtt ttgcaatatt aatgccgtaa tttatatata tcagaaaatg
     1021 tgagatgtag aaaatttcaa cctcaatatt agctgcactt catccgatat tggacacgaa
     1081 atcagataat cacaaacatg tttaattatc gattccattc cttgtactcg atatttaaac
     1141 catttaaaga gctatttttt attcgttagt aattgttttg aaaggaaaaa tcgaaaagca
     1201 aacaaaattc aacaataata attttagaat gtataacatt tattcgcatt tagtattttt
     1261 gcccacttat gaaatattac cttctattac gcactttctt catgttattt ttaggaatac
     1321 tggttgcatg taataatgtt caaactaaaa cctctgaaat ttcaatttct ccgattcccg
     1381 aaataaaaaa agaaattttt catgatcctg atagtgctgt tatctcaaaa aaagcaattg
     1441 aattggataa taaatttaag cgattggtta aaactaatgg gtttaatggc actgtacttt
     1501 atgcggaaaa gggtagagtt atattacaaa aggcttatgg atatagaaat gttaggtcta
     1561 aaaaagagga actaactatt tcagatgcat ttcaattggc ttccatatca aagatgttca
     1621 gtgcaatggc catcatgatt cttaaaaatg atggaaaggt tgattatgat gaaaacataa
     1681 ttacctattt accagatttc ccttatgaag atgttacttt aaggttgctc atgactcatc
     1741 gtgccggact tccaaggtat atgagcattg ctcatagtag ttggaaaaac aaaaaaattc
     1801 cgttgaacaa tgatgatatg ctggatcttt ttgtagaata taaaccagac aagtattttt
     1861 cgcccaatac aggtttccat tattgtaata caaattatgc tttacttaca aatattgttg
     1921 aatcagtatc tgggatgcat tttgagaatt ttgtggaaga aaggatattt attcctcttg
     1981 agatggaaaa ttcgtttgtt tacaatatga ggcaagatac aagtgtttcc ctatatgtcg
     2041 aagaaggtgt tccgggatat tatctccgtg gatggcgttg gcgcgaaatg acaaacgaat
     2101 atctaaatgg tgtgatggga gataaaaata tttatacttc agttggagat ttatataagt
     2161 acgatcgtgc tcttgataat tttacattat tgcctgaaga aattattgcc gaatcgttta
     2221 aacgaggaaa tcctagttac tggaaaagaa aaaacaacta tggctttgga tggcgtgtta
     2281 aagaggatat ggacagtact gtatttcatt ttggatggtg gaaaggtttc cgtacttttt
     2341 atattcgtga aatgaaatac cagaaaacgt tgattgtatt aaccaataaa gataaaggtc
     2401 cgggttcatc acacttttgg aatattatta aagctgatac tttaccgatt ggtagaacat
     2461 gtgaaattaa acgacaagat tagtttgttt atcgtcttac aattgataaa tacaataatc
     2521 attattatct aaaacaatgg gtaggtcaag gtcaatattt gtcccaaatg ctttcttcaa
     2581 tatcactata tatttaagcc ccttttcttt taggttgttg atatattttt catcaacgag
     2641 tttttcatta gattcaaccc aaccttttcg gtgggcaaaa tacattggag taggatattc
     2701 accgctattt attaaaatca gatcctctag taatgatact ttgtccaaat cctcttctaa
     2761 gtttagtata gcccattcct tgtcatgaat tctaaaatca tgctgctgac taagtattcc
     2821 atcaatgcta atggcaagta atacaacaaa tgcaatcttt ttattcttga tttgagcgag
     2881 accatatcca gcaattagtg ccataacagg tacaaatggg acgatgtaat aagagtggcg
     2941 agcgaatgtg tccccagctt taaaaataat caccatcatg gataagaaac tcaggacaaa
     3001 aacataagat agtagtttgt ttttttttaa taatcacatg aactaatcca aacaggaata
     3061 atgcaaaacc aataaaatta aacgcatttt catagaaatt ttgcagagtc gaacttaaat
     3121 tatttgtaat gttaattata ccctgatata actcttttcc caataaaaag taca
//
LOCUS       DASCQP010000012         4109 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000031662, whole genome shotgun sequence.
ACCESSION   DASCQP010000012 DASCQP010000000
VERSION     DASCQP010000012.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4109)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4109)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4109
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000031662"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            195..1172
                     /locus_tag="QF480_00195"
     CDS             195..1172
                     /locus_tag="QF480_00195"
                     /inference="COORDINATES: protein motif:HMM:NF033542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HJN05010.1"
                     /translation="MDKITIYYGIDISKDVFDVMDNFEVHHQFSNSKSGFAKFFKWLK
                     PNSCCVMEATGVYHTQLADYLYEKDVFVSVVNPLVIKRFIQMNLRRIKTDKADADMIC
                     RYAQLNELNAYKPEAVYIKESRVISENLSLLLKSRTMFKNRLHALIHKQSKHRNALIK
                     PINDTIKNLCKQIEVLEGELQKLIMENESDLYYNLQTIPGIGKSTAMYMIVISDGFRK
                     FESAKQFICYAGLSPVENRSGSSVRARSHISKQGNGKLRNLLFMCSFNACISNKSCKL
                     MYERITAKGKSKKLALIAVANKLIKQSFAIARSGLVYDSEFVSVKPSLR"
     gene            complement(1178..1408)
                     /locus_tag="QF480_00200"
     CDS             complement(1178..1408)
                     /locus_tag="QF480_00200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05011.1"
                     /translation="MRKKFINKKTLVIGGSVKRERYSNKAIRKLLDYGHRVESIGLRE
                     SKVESVDILTDKHDMKNIHTITMNCGKNQGKL"
     gene            1674..>4109
                     /locus_tag="QF480_00205"
     CDS             1674..>4109
                     /locus_tag="QF480_00205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010799914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HJN05012.1"
                     /translation="MNLNHFTIKSQEAIQKAQEIASSNNNQSIESIHLLKAIINVDEN
                     VTPFLLKKLNVNFIVFSKAIDNIIESLPKVSGGEGYFSREATDVLQKARTYLKEFKDE
                     FVSIEHLLIAILEVKSTASILMKDNDIKKKELTEAIKQLRKGASATNQSAEDQYNALS
                     RYARNLNDLAGSGKLDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGVGKTAIAEGLA
                     HRIVNGDVPENLKSNLIYSLDMGALVAGAKYKGEFEERLKSVVKEVLSSDGEIILFID
                     EIHTLVGAGKGEGAMDAANILKPALARGELKAIGATTLKEYQKFFEQDKALERRFQQV
                     LINEPDTMSAISILRGLKDRYETHHKVRIKDEAIISAVELSQRYITDRFLPDKAIDLM
                     DEAASKLKLEINSLPEELEIVERKVRQLEIEREAIKREKDKLKLEAIKENLANLNEER
                     TSLRAAWQAEKDLVDKIQQKKQEQEEYKVHAEQAERDGDFGKVAEIRYGKLQDNQADI
                     EAYKVQLEDLQGDSPMINEEVGAEDIADVVSKWTGIPVNRMLQSEREKLLTLETELHE
                     RVIGQDDAITAISDAIRRSRAGLQDEKRPIGSFIFIGTTGVGKTELAKALADFLFNNE
                     NAMVRIDMSEYQERHSVSRLIGAPPGYVGYDESGQLTEAVRRKPYSVVLLDEIEKAHP
                     DVFNILLQVLDDGRLTDNKGRVVDFKNTIIIMTSNIGSHIIQENFSGIDEQNQDKIVE
                     KTKVEVLDLLKKTIRPEFLNRVDEIIMFKPLTRNETNDIVRLQFNGVKKMLQKNNIEI
                     NITENAINKLADIG"
BASE COUNT         1507 a          636 c          778 g         1188 t
ORIGIN      
        1 caatattata tatttataaa ataatcagaa gaacgaaaga gaggaataag gctcatttat
       61 acacgaggac aaaacccgtc aacaatgcaa gtcccctctc tttctctact aaaatctgaa
      121 cagttcatta ggcctgtaga gcctgttttc aggatgttag gtatcagtag cttcgttctt
      181 ccaaaatgta tattatggat aaaattacaa tttattatgg aattgacatc tctaaagatg
      241 tttttgatgt gatggataat tttgaagttc atcaccaatt ttcaaatagc aaatcagggt
      301 ttgcaaaatt ctttaaatgg ttaaagccta atagttgttg tgtaatggaa gcaactggag
      361 tttatcacac tcaattagca gattatttat atgagaaaga tgtttttgtt tcggtagtta
      421 acccattagt tataaagcga tttattcaaa tgaatttacg aagaataaag actgacaaag
      481 ctgatgctga tatgatatgt agatatgctc aattaaacga attaaatgcc tataaaccag
      541 aggctgttta tatcaaagaa agtagggtta tatcagaaaa ccttagtttg ttattgaaaa
      601 gcagaactat gtttaagaac cgattacatg cattgattca taagcagagc aaacatagaa
      661 atgctttaat aaaaccaata aatgatacta ttaaaaacct ttgtaaacag attgaagtat
      721 tagaaggaga gttacaaaaa ttgataatgg aaaatgagtc agatttgtat tacaacttac
      781 aaacgatccc tggtatcgga aagagtacag caatgtatat gatagttatc agtgatggtt
      841 ttagaaagtt tgagagtgcc aaacaattta tatgttatgc tggtctttcg ccagtagaaa
      901 atcgctcagg ctcaagtgtg cgtgctagaa gtcatattag caagcagggg aatggtaagc
      961 tgagaaattt gctttttatg tgcagtttta atgcatgcat atccaacaag tcttgtaaac
     1021 taatgtatga aaggataaca gcaaagggta aaagtaagaa gttggctctt attgcggtag
     1081 ctaataagtt aatcaaacag tcatttgcta ttgcacgctc aggattagtt tatgattcag
     1141 aatttgtaag tgttaaacca agcctaaggt aaaataatca caattttcct tggtttttac
     1201 cacagttcat tgttattgta tgaatatttt tcatgtcgtg tttatcagtt aaaatatcaa
     1261 ccgactcaac tttcgattct cgtaatccga tcgactccac tcgatgacca taatccagca
     1321 actttctaat tgccttattc gaatatcgtt cgcgtttaac acttccacca attactaatg
     1381 ttttcttatt tatgaatttc tttcgcattt cacaaagtaa atcactttaa ctaaaattaa
     1441 aaaaacaatt tcatattaaa cggatagtaa tgacttttat ttttatcttt aatcgatata
     1501 acttaagatg aaaatctcac aaacattcca aataaattat tattgcccta acaatctaaa
     1561 tatcaagcca ttttgacagt tagccttgaa atattatgac aaattttcct gtttacaata
     1621 cacttgttta tttggtaagt cttttgctat tgctctagtt aaaaataaat aatatgaact
     1681 taaatcattt tacaataaaa tcacaagaag ccatacaaaa ggctcaggaa atagcatctt
     1741 caaataataa tcagtcaata gaaagtattc acttattaaa agctattatt aatgttgatg
     1801 agaatgttac ccctttctta cttaaaaagc taaacgttaa ctttatagtc ttttctaagg
     1861 ctattgataa tataatcgaa tctttaccaa aggttagcgg aggggaaggt tatttttcaa
     1921 gagaagcaac agatgtatta caaaaggcaa ggacttatct aaaagagttt aaggatgaat
     1981 ttgtttctat cgaacatttg cttattgcaa tacttgaagt aaagagcaca gcctcaatcc
     2041 taatgaaaga taatgatatt aagaaaaaag aacttactga agctattaaa caattgcgaa
     2101 aaggagcttc agcaactaat caaagtgcag aagatcaata taatgcattg agtcggtacg
     2161 ctcgcaattt aaatgacttg gcaggttctg gtaaacttga tccggtaatt ggacgagatg
     2221 aagaaataag acgagtactt caaatattgt caagaaggac aaaaaataat ccgatactta
     2281 tcggggaacc tggagtaggt aaaacggcta ttgcagaagg tcttgcacac aggattgtga
     2341 atggtgatgt tccggaaaat cttaaatcta atttgatata ctctttagat atgggagctt
     2401 tggttgcagg agcaaaatat aaaggcgaat ttgaagaacg attaaaaagt gtggtcaaag
     2461 aagtcctttc atccgatggc gaaataattc tgtttattga tgaaattcac accttagttg
     2521 gtgcaggtaa aggagaagga gccatggacg ctgcaaacat cctaaaacca gccctcgctc
     2581 gaggcgagtt aaaggccata ggagcaacaa cgcttaaaga atatcagaag ttttttgagc
     2641 aagacaaagc cctggaaaga cgatttcagc aggtacttat caatgaaccc gatactatgt
     2701 cggcaatatc aattttgcgc ggacttaaag ataggtacga aacccaccat aaggttcgta
     2761 ttaaagatga agcaattatt tcagcagttg aattatcaca gcgttatatt actgacaggt
     2821 ttctaccgga taaagccatc gacctaatgg atgaagctgc atcaaaacta aaactcgaaa
     2881 taaattcact acccgaagaa cttgaaattg tagaacgcaa agttcgtcaa cttgaaattg
     2941 aacgggaggc tattaaacgt gaaaaggata aactaaagtt agaggctatc aaagaaaacc
     3001 ttgccaacct taacgaagaa agaaccagcc ttagagcagc atggcaagct gagaaagatt
     3061 tggtagataa aatacaacaa aaaaaacagg agcaggaaga atacaaagtt catgcggagc
     3121 aagccgaacg tgatggtgat tttggcaagg tagcagaaat acgatatggt aaactacaag
     3181 ataatcaagc tgatattgaa gcatataaag ttcaacttga agatcttcag ggtgatagtc
     3241 ctatgattaa cgaagaagta ggcgcagaag atatcgcaga cgttgtttca aaatggacag
     3301 gtataccagt gaacagaatg ctacaaagcg aaagagagaa actcctgact ctggaaaccg
     3361 aattacacga aagagtaatt gggcaagatg atgctataac agccatctca gatgcaatcc
     3421 ggagaagtcg ggctggctta caagatgaaa aaaggcctat tggatcgttt atctttattg
     3481 gtacaaccgg agttggtaaa acagaacttg ctaaagcatt ggccgatttc ctttttaata
     3541 atgaaaatgc tatggtgcga atagatatgt cagagtatca agaacgtcac tcagtatcaa
     3601 ggcttattgg tgcacctcct ggttatgttg gttatgatga aagcggtcag ttaactgaag
     3661 ctgttcgacg taaaccatat tctgttgttt tgcttgacga aattgaaaaa gcacatcctg
     3721 atgtatttaa catattactt caagtactag atgatggaag gttaacggat aataaaggta
     3781 gagtggtaga ttttaaaaat actataatca tcatgacatc aaacattggt tcacacatta
     3841 ttcaagagaa cttttcagga atagatgagc aaaatcagga taagatagtt gaaaaaacta
     3901 aggttgaagt attggatctc ctcaaaaaaa ctatacgccc ggagttttta aacagggttg
     3961 atgaaataat aatgtttaaa ccgctaacaa gaaatgaaac taatgatatc gtacgacttc
     4021 agtttaatgg cgtgaaaaag atgctacaaa aaaacaacat cgaaattaac attactgaaa
     4081 atgcaattaa caaattagcc gacattgga
//
LOCUS       DASCQP010000013         2876 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000034708, whole genome shotgun sequence.
ACCESSION   DASCQP010000013 DASCQP010000000
VERSION     DASCQP010000013.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2876)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2876)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2876
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000034708"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..795
                     /locus_tag="QF480_00210"
     CDS             <1..795
                     /locus_tag="QF480_00210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013610745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HJN05013.1"
                     /translation="YSQGFCESEDLPLESLVSNHYFILKSDNASALAYYSSVTKRIER
                     VEKHSVSRIIPRNAEQVFALHAIMNPEVKLVTLQGVAGTGKTLLALAGAWEQRRNFKQ
                     IYLARPIVPLSNKDIGFLPGDIHEKINPYMEPLWDNLKFIQSQFGEQDKEYKRINDAL
                     ESEKLMITPLAYIRGRSISNICFIVDEAQNLTPHEVKTIITRAGENTKIILTGDIYQI
                     DTPYLDSQSNGLSVLIDKIKHHDIYAHVRLEKGERSELANLANDML"
     gene            1063..1848
                     /locus_tag="QF480_00215"
     CDS             1063..1848
                     /locus_tag="QF480_00215"
                     /inference="COORDINATES: protein motif:HMM:TIGR02494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0043687 - post-translational protein
                     modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycyl-radical enzyme activating protein"
                     /protein_id="HJN05014.1"
                     /translation="MHGTIFDIKHFAIHDGPGIRQTIFFNGCSLSCWWCHNPEGRSCD
                     IFSFENEEILEGEKLYETKSIGKEYAITDLISEIKKDTIFFEESGGGVTFSGGEPLLQ
                     YDFVAALLKKCKDLEIHTCIDTTGNISSEKLINAASYTDLFLYDIKHIDEKQHIKYTG
                     ISNKLILNNLKLLDEMEKDIWIRFPLIPEINDNESDLLSMMEFLSQLKKKYPISILPY
                     HKIGSHKYKRFGIEYKMNGIEEYCDDDVKKIKNMFNEGGFMTI"
     gene            2065..>2876
                     /locus_tag="QF480_00220"
     CDS             2065..>2876
                     /locus_tag="QF480_00220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013613765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate formate lyase family protein"
                     /protein_id="HJN05015.1"
                     /translation="MNDRIKRLREQSLNAEPRISTERAMLITEFYKSDICRKASIPER
                     RALAFKHILSNKSIFILDDELIVGERGPAPKVVPTYPEINLHSLEDLHVLNTRPKVWF
                     RVNDETKELYKDIVIPFWEGKTNREKIFSNVDKSWIDAYEAGVFTEFQEQRAPGHTVL
                     GKKMFNKGFLDLKNEVKDSIANLDFINDPDADNKHEELKAMDITADAIILFASRHADE
                     LERLAQNEKTENRKLELIQLASICRKVPADAPETFHEALQHYWFIHVGVISEV"
BASE COUNT         1008 a          444 c          544 g          880 t
ORIGIN      
        1 tattcacaag gattttgcga atctgaagat cttcctcttg aatcattagt atctaaccat
       61 tattttattt taaaaagcga caacgcttcc gcattggcat attatagttc agttactaaa
      121 cgcattgagc gtgttgaaaa acatagtgta tcgcgtatta taccgcgcaa tgctgaacaa
      181 gtatttgcat tacacgccat tatgaatcct gaggtaaaac tagttacatt acagggtgtt
      241 gccggaaccg gaaaaacact gttggcactt gcaggcgcat gggaacaacg acgaaatttt
      301 aaacaaattt accttgcaag acctattgtt cctttaagta ataaagatat cggttttttg
      361 cctggagata ttcatgaaaa aattaaccca tatatggagc ctttatggga taatttaaaa
      421 tttattcaaa gtcaatttgg tgagcaggat aaagaataca agcgcataaa tgatgctcta
      481 gaaagcgaaa aactaatgat aactccctta gcatatatta gagggcgaag catttcaaat
      541 atttgcttta ttgttgatga agctcaaaac ctcacaccac atgaagtaaa aacaataatc
      601 acacgtgccg gagaaaacac taaaattatc ttaacgggcg atatttatca aatagataca
      661 ccttacctcg attcacaatc aaatggactt tcagtgttga ttgataaaat taaacatcat
      721 gatatttatg cacatgttag gctcgaaaaa ggagagcggt cggagttggc aaacctcgct
      781 aatgatatgc tataagtgta accactggaa gtattagtgc gtttttgata atcaattttg
      841 acattcatac ttgacaaatt tgttagtagt tagtactttt gtttcatata ttagacttat
      901 gataggtcat tttatccata atcaagtatc acacgacctc aacagttgcc tgtatgagtg
      961 ttggattttt tgatcatcac cttaaccttt caagttgata gaaacctgaa aggatgtcca
     1021 ttcaacaaat aacttataac atttaactct tcacttttcc ccatgcatgg aacaattttc
     1081 gatataaagc attttgcaat ccacgatggt cctggcattc gccaaacaat attttttaat
     1141 gggtgctctt tatcttgttg gtggtgtcac aatccagaag gcaggagttg cgatattttt
     1201 tcttttgaaa atgaagaaat tttagaggga gagaagttat atgaaacaaa atctatcggt
     1261 aaagaatatg caataactga tttgatttct gaaataaaga aagatactat attcttcgag
     1321 gagtcaggtg gaggagtaac tttttcaggt ggtgagcctc tgttgcaata tgattttgtt
     1381 gcagccctgt taaaaaaatg caaggatctg gagattcaca catgtattga tacgactgga
     1441 aatattagta gtgaaaagct tattaacgca gcctcgtata ctgacttatt tctctatgat
     1501 ataaaacata ttgatgaaaa acaacatatt aaatatactg gtataagtaa taaattaatc
     1561 cttaataatt tgaaattact tgatgaaatg gaaaaagaca tttggattcg atttccactt
     1621 attcccgaaa ttaatgataa tgaatctgat ttgcttagta tgatggagtt tctttcacaa
     1681 cttaagaaaa aatatcctat aagtatattg ccatatcata aaattggaag ccacaaatat
     1741 aagcgatttg ggattgaata taagatgaat ggaattgaag aatattgtga tgatgatgtg
     1801 aaaaaaataa agaatatgtt taatgaaggt ggatttatga ctatttgaga aactttggga
     1861 aatattggat ataagggcat aagggaaata gcggatatgg taatatgaaa gaatggatga
     1921 ttaataggac tacaattggg ataaggttag caaataaccc aaagatcccc caatacctca
     1981 acgccatata tcccttatat cccgacacct gcattgtaaa aaaggaaacg gacaaattat
     2041 tggttattta aattaagtta agccatgaat gacagaatta aaagattaag agaacaaagt
     2101 ctaaatgctg aacctagaat ttctactgag agggctatgc tgattactga gttttacaaa
     2161 agtgatattt gtaggaaagc aagcatcccg gaaagacgtg cacttgcctt taaacatata
     2221 ttgagcaata agtcaatttt tattctcgat gatgagctca ttgttggaga acgtggaccc
     2281 gctcctaaag tggttcctac ctatcctgaa attaacctac attcattaga agatcttcat
     2341 gttctaaata ccagaccaaa ggtttggttc agggttaatg atgaaaccaa ggagttgtat
     2401 aaagatattg ttatcccttt ttgggaaggt aaaacaaacc gcgaaaagat attttccaat
     2461 gttgataagt catggattga tgcctatgaa gcaggtgtat ttacagagtt tcaggagcaa
     2521 agagcaccgg gacatactgt acttgggaag aaaatgttta ataaaggatt ccttgatcta
     2581 aagaatgaag ttaaagacag cattgcaaac cttgatttca ttaatgatcc ggatgcggat
     2641 aataagcatg aagaacttaa agcaatggat attactgctg atgctattat tctttttgct
     2701 agccgacatg ctgacgagtt agaaagacta gctcagaatg aaaagactga aaatagaaaa
     2761 ttagaactca ttcaactagc ttcaatatgt agaaaagttc ctgccgatgc accggagact
     2821 tttcatgagg cattacaaca ttactggttt attcatgttg gcgttatttc agaagt
//
LOCUS       DASCQP010000014         2302 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000035002, whole genome shotgun sequence.
ACCESSION   DASCQP010000014 DASCQP010000000
VERSION     DASCQP010000014.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2302)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2302)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2302
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000035002"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..900
                     /locus_tag="QF480_00225"
     CDS             <1..900
                     /locus_tag="QF480_00225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018109940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HJN05016.1"
                     /translation="INASWIAIVGNLLLSALKIVVGIIAGSYAVVADGIDSASDVLTS
                     LITLFTAHIISRPPDLKYPYGYYKADTLATKLLAFIIFFAGAQLAISTSEKLLNPIET
                     EIPNSIAIYVIMLSIVGKYALAFFLRKTGKSIDSQMLIANARNMQNDVVISLSVLTGL
                     IFTFMLELPIFDLITAFLVSLYIMFIAFRIFMQTNRDLMDGIDDPDIYQKIIEAVKRI
                     EGVSNPHKIRVRKMAHQFIIAVDIEVDGNISLHDAHELSVQVENEIKNTLPNVYDVIV
                     HAEPIGNDEPDEVYGVSEDKLTV"
     gene            988..>2302
                     /locus_tag="QF480_00230"
     CDS             988..>2302
                     /locus_tag="QF480_00230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009316832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase"
                     /protein_id="HJN05017.1"
                     /translation="MVYFFQLNTTKFYFVDTEIKLSKGDLKKLSWLFSGAEIIDSQKL
                     KGNFIGPRKEMITPWSTNAVEITQNMGIVGILRIEEMILTKEKDASYDPMLQQIYNGI
                     DQKVFAIPELPEPIKYIDDISNYNNSEGLALSDDEIIYLEEISNTIDRKLTDSEIYGF
                     AQINSEHCRHKIFNGKFIIDGQEMKDSLFALIKETSSKNPNKLVSAYKDNVAFVVGPK
                     VEQFAPITQDKADFFQISDISTVLSLKAETHNFPTTVEPFNGASTGTGGEIRDRLAGG
                     KGSLPLAGTAVYMTSYPRNSNDHVWEKNIEARPWLYQSPEDILIKASNGASDFGNKYG
                     QPLINGSLLTFEHEENNKKFGYDKVIMLAGGIGFAVTSDAQKDIPEEGDIIVVLGGDN
                     YRIGMGGGAVSSVATGEFGNEIELNAVQRANPEMQKRVANAIRSMT"
BASE COUNT          756 a          378 c          436 g          732 t
ORIGIN      
        1 ataaatgctt cctggattgc aatagttggg aacttattac tttcagctct taaaattgtt
       61 gttggaataa tagcaggtag ctatgcagtt gtagctgatg gtatcgactc tgccagcgat
      121 gtccttacgt cgttgataac tttgttcaca gcacatatta ttagtcggcc tcctgattta
      181 aaatatccat acggttatta taaagccgat actttagcta caaaattatt ggcttttatc
      241 atcttttttg ccggtgctca attagctatt tctacctcag agaaactttt aaatcctatt
      301 gaaacagaaa ttccgaatag tattgccatt tatgttatta tgttatcaat agttggaaaa
      361 tatgctctcg ctttcttttt gagaaaaact ggcaaatcga ttgatagtca aatgttaatt
      421 gctaatgcaa ggaatatgca aaacgatgta gttatttccc tatctgtatt aacaggactt
      481 atttttacat ttatgcttga gctgccaatt tttgatctga ttaccgcatt tctcgttagt
      541 ctctatatta tgtttattgc tttcagaatt tttatgcaaa ctaacaggga tttaatggat
      601 ggtattgacg atcccgacat ctatcaaaag ataattgaag ctgtaaaaag aatagaagga
      661 gtttcaaatc cccataaaat cagggtgaga aaaatggctc atcagtttat aattgcggtt
      721 gatattgagg ttgatggtaa tattagttta catgatgctc atgagctttc agttcaggtt
      781 gaaaatgaga taaaaaatac gctcccaaac gtatatgatg ttatcgttca tgccgaacct
      841 attggaaatg atgaacctga tgaggtttat ggtgtttcag aagataaatt aacagtctaa
      901 atgttaactt tttccctttt taatgtaccc tcctacgatc tcctttctta tatttgcagc
      961 ttattttttg cctaaaaaga acatacgatg gtttactttt ttcagttgaa taccactaaa
     1021 ttttactttg tagacacaga aataaaactt tcaaagggtg atcttaaaaa acttagttgg
     1081 ctttttagtg gtgctgaaat tattgacagc caaaagctta agggtaattt tattggccca
     1141 cgcaaagaga tgattacacc atggagtaca aatgctgttg aaataacaca aaacatgggt
     1201 attgttggca tccttcggat tgaagaaatg atattgacaa aagagaagga tgcaagttac
     1261 gatccaatgc tccaacaaat ttacaatggt atcgaccaaa aggtattcgc aattcccgaa
     1321 ttacctgaac caataaaata tattgatgac atttccaatt acaataactc ggaaggttta
     1381 gctttaagtg atgatgaaat tatttatttg gaagaaatca gcaacactat tgatagaaaa
     1441 ttaaccgatt cagaaatata cggatttgct caaattaatt ctgaacattg cagacataaa
     1501 atttttaatg gcaagtttat aattgatggc caagaaatga aagacagttt gttcgctttg
     1561 attaaagaaa cctcttcgaa aaatcctaac aagcttgttt ctgcatataa agacaatgta
     1621 gcttttgtcg tcggacctaa ggttgaacaa tttgcaccca ttactcagga caaagctgat
     1681 ttttttcaaa tcagtgatat tagcacagtg ctttcgctta aagcagaaac acataatttt
     1741 ccaacaaccg ttgagccatt taatggtgca tctacaggta ccggtggtga gatacgcgac
     1801 agactggcag gaggaaaagg cagtttgcca ttggcaggca cggctgttta catgacttca
     1861 tatcctagaa acagtaatga tcacgtttgg gaaaaaaata ttgaagcacg accatggctt
     1921 taccaatcac ctgaagatat tctcataaaa gcttcaaatg gagcttccga ttttggaaat
     1981 aaatatggcc aaccactgat taacggaagt ttactaactt ttgaacatga ggaaaataat
     2041 aaaaaatttg gttacgacaa agtaataatg cttgctggag gtattggttt tgcagtaaca
     2101 tcagatgcac aaaaagacat tccagaagaa ggagatatta ttgttgtcct cggtggagat
     2161 aattaccgca ttggcatggg tggtggtgct gtttcatcgg tagcaaccgg tgaatttggt
     2221 aatgaaatag aacttaatgc cgttcaacgt gccaatccgg agatgcaaaa aagagttgcc
     2281 aatgcaattc gttcaatgac ag
//
LOCUS       DASCQP010000015         3037 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000040465, whole genome shotgun sequence.
ACCESSION   DASCQP010000015 DASCQP010000000
VERSION     DASCQP010000015.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3037)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3037)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3037
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000040465"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1589)
                     /locus_tag="QF480_00235"
     CDS             complement(<1..1589)
                     /locus_tag="QF480_00235"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004301852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004832 - valine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006438 - valyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HJN05018.1"
                     /translation="MDMPSKYNPALTEDKWYSYWMNKNYFHSVPDDREPFTIVIPPPN
                     VTGVLHMGHMLNNTIQDVLIRRARMQGKNACWIPGTDHASIATEAKVVDKLGAENINK
                     KDIGREKFIEHAWEWTHKHGGIILEQLKKLGASCDWERTAFTMSDSLYESVIDVFIDL
                     YNKDLVYRGIRMVNWDPVAKTAVSDEEVIHKELQSKLYYLKYKVEDENNFITIATTRP
                     ETILGDTAVCVHPKDERFLSFHGKNVIVPLVNRAVPIITDEYVDREFGTGALKITPAH
                     DVHDYELGIKHKLKTIDIFNDDGTMSTSAELYTGKDRFAVRDEILIDLKKAGNLDKTE
                     DYVNKVGYSERTNTVIEPKLSLQWFLRMSEFSKAALNVVENGDIKFHPPMYKNIYRHW
                     MENLRDWNISRQLWWGQRIPVYYLPNGEIVVAKTIEEAILKAEEEHNLPDLVAEDIKQ
                     DEDVFDTWFSSWLWPISVFDGIRNPGNNDIEYYYPTNDLVTGPDIIFFWVARMIMAGL
                     EYRKDIPFKNVYFTGIVRDKIG"
     gene            complement(1780..>3037)
                     /locus_tag="QF480_00240"
     CDS             complement(1780..>3037)
                     /locus_tag="QF480_00240"
                     /inference="COORDINATES: protein motif:HMM:NF014489.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HJN05019.1"
                     /translation="TINLPIHLHTHDTSALQIATYLKAVEAGVDVVDVAIGGLSGLTA
                     QPNFNSMLEFMQFHERENKMDIAKLNKFSNYWEVVREYYYPFESGLKAGTAEVFKHEI
                     PGGQYSNLIPQMTALGLADRFEDVKDTYADVNQLFGDIVKVTPSSKVVGDMALYLVTN
                     NLKASDVLDKGDTISWPESVQAFFRGDLGQPQGGFPPELQKIILKDKKPYSSLPNAHL
                     ESVDFDNEFITFNEKFKNNVTRKLNITDFISYKLYPKVYEDYSEKIRIYENISKIPTL
                     NFFYGLKENEEVFVEIAKGKTIIVKLLSVGPANEEGFRTLFFSVNGQARNIEVKDTSL
                     GIEVIENIKADNSDPKQIASPLQGLLSKVFVEKGQKVKKNDPLFVIEAMKMETTITAT
                     EDSQIGSIVLDSGALVNAEDLILYLS"
BASE COUNT          931 a          598 c          485 g         1023 t
ORIGIN      
        1 ccaattttgt cacgtacaat acctgtaaaa taaacatttt taaaagggat atccttccta
       61 tattcaagcc cagccattat cattcgtgct acccaaaaga aaattatatc tggaccggta
      121 accaaatcat tagtaggata ataatattcg atatcattat taccaggatt tctaattcca
      181 tcaaaaacag aaattggcca taaccatgac gaaaaccaag tatcaaaaac atcttcatct
      241 tgcttaatat cttcagcaac caaatctggt aggttatgtt cttcctcggc ctttaatatt
      301 gcctcttcaa tagttttggc aacaacaatc tcaccattag gtaaataata tacaggaatc
      361 ctttggcccc accataactg acgagagata ttccaatctc taaggttttc catccagtga
      421 cggtaaatat ttttatacat tggtggatga aacttaatat caccattttc cacaacatta
      481 agtgcagcct tactaaactc actcatcctt aaaaaccatt gtaacgacaa ctttggttca
      541 ataactgtat tggtgcgttc cgaataacct accttattta cataatcttc agttttgtca
      601 agattacctg cttttttcag gtcaattaat atttcatcgc gaacagcaaa acgatcttta
      661 ccggtatata attcggcact tgtactcata gtgccatcat cattaaaaat atcaattgtt
      721 tttagcttat gcttgatgcc taattcgtaa tcgtgcacat catgggcagg cgtgattttt
      781 aaggctcctg taccgaattc ccgatcaaca tattcgtcag taataattgg aacagctcta
      841 ttgacaagtg gaactatcac attctttcca tgaaaggaga gaaatctttc atctttcgga
      901 tgaacacaaa cagcagtatc acctagtata gtttctggtc gtgtggtagc aattgtgata
      961 aagttatttt catcttcaac tttatattta agataataaa gttttgattg taattcttta
     1021 tgaattactt cctcatcact tacggcagtt ttggccacag gatcccagtt taccatacgg
     1081 atacccctgt atactaagtc tttattataa agatcgatga atacatcaat tactgattca
     1141 tacaaggagt cgctcattgt aaaagctgta cgttcccaat cgcatgaggc tccaagcttt
     1201 tttaattgtt caagaataat tccgccgtgc ttatgtgtcc attcccaagc atgttcaata
     1261 aacttttcac gtccaatatc ttttttgtta atattttcgg ctcccagttt atctacaact
     1321 ttagcttcag ttgcaattga tgcatggtcg gtgcccggaa tccaacatgc attttttccc
     1381 tgcatacgag ctctgcgaat caggacatct tgaattgtat tgtttaacat atgacccatg
     1441 tgtaatacac ctgtaacatt aggaggtggt attacaattg taaatggttc cctgtcatcg
     1501 ggtaccgaat gaaaatagtt tttattcatc cagtagctat accatttatc ctctgttaaa
     1561 gcaggattat acttgctggg catgtccata gaaagtcaat ttattctgag aggcaaaaat
     1621 ataaaagtta aggttaagtt ttagattgaa aagatgaaat gctaaagtat tctggaacaa
     1681 attacaaata ctttatttat aaaattaaat gtgaaaaata atatgtcaac tcgttgtttt
     1741 ctcaaatccc aatatagttt tcgtacataa gtaacaccac taacttaaat aaagaatcag
     1801 atcctctgca tttactaagg ctccagaatc taaaactata cttccaatct gtgaatcttc
     1861 tgtggcagtt attgtagttt ccattttcat agcttcaata acaaacaaag ggtcgttctt
     1921 tttaactttc tgtccttttt caacaaatac ttttgacaat aatccctgta aaggggaggc
     1981 gatttgtttt ggatcggaat tatcagcttt tatattttca atcacttcga tacccaaaga
     2041 tgtgtccttt acctctatat tacgtgcttg cccattaaca ctgaaaaaca aggtgcgaaa
     2101 accttcctca tttgctggac ctaccgaaag aagttttacg attatagttt tcccttttgc
     2161 aatttctaca aaaacctctt cattctcttt caatccataa aagaaattta gagtagggat
     2221 ctttgatata ttctcgtaaa ttctaatttt ttcactataa tcctcataaa cttttggata
     2281 tagtttgtaa gaaataaagt cggtgatatt taatttacgg gtaacattat ttttgaattt
     2341 ttcattaaat gtgataaatt cattatcgaa atctactgat tctagatgtg cattgggcag
     2401 ggaggaatat ggctttttat ctttaaggat aattttctgt aactccggag ggaaccctcc
     2461 ctgaggttgt ccaagatcac cacggaaaaa cgcctggact gattcaggcc aggagatagt
     2521 atcaccttta tcgagaacat cggaggcttt taaattgttg gttaccagat aaagagccat
     2581 gtcgccaaca actttagaac ttggcgtcac ctttacaatg tcgccaaaca actgattgac
     2641 atcagcgtag gtatctttta cgtcctcaaa tcggtcggca agtcccagag ctgtcatttg
     2701 aggaattagg tttgaatatt gccctccagg tatttcatgc ttaaatactt ctgcggttcc
     2761 agctttcaga cctgactcga agggataata gtattctctt accacttccc aataattgga
     2821 aaatttgttg agcttggcaa tgtccatttt attttcccgt tcatgaaatt gcataaactc
     2881 caacattgaa ttaaaattag gttgagctgt tagtcctgaa agtccaccta ttgccacatc
     2941 aacaacatca actcctgctt ctacagcttt caaataagtc gctatttgta aagctgatgt
     3001 atcatgagtg tgtagatgga taggtagatt tattgtt
//
LOCUS       DASCQP010000016         5496 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000045646, whole genome shotgun sequence.
ACCESSION   DASCQP010000016 DASCQP010000000
VERSION     DASCQP010000016.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 5496)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5496)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5496
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000045646"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            61..378
                     /locus_tag="QF480_00245"
     CDS             61..378
                     /locus_tag="QF480_00245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006745616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P) transhydrogenase subunit alpha"
                     /protein_id="HJN05020.1"
                     /translation="MENLLVYFYENKDMIFIIALSIFLGVEVISNVPSVLHTPLMSGA
                     NAISGVIIIGGIILLGHTDMTGFSLNLVLGIFAVIFGALNVFGGFVVTDRMLEMFKKK
                     KKK"
     gene            381..1802
                     /locus_tag="QF480_00250"
     CDS             381..1802
                     /locus_tag="QF480_00250"
                     /inference="COORDINATES: protein motif:HMM:NF014307.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)(+) transhydrogenase (Re/Si-specific)
                     subunit beta"
                     /protein_id="HJN05021.1"
                     /translation="METTLYDLGVTAGDVFLEISYLLAAIFFVIGLKLMSHPESARKG
                     NFWAGGGMGLAMVTTLFLHTDETGAHIGMTNVIVIIIAIAIGAILGSLVARKVKMTAM
                     PQLVSVFNATGGAASALVALMEYSNPANTSAVVTLLGLIIGTIAFSGSMIAYGKLDGK
                     VGDIFAGWVKYFNIFLLLVIAALTVYMLVFDVSSEMQTVLSYILLTLALIYGIMFVMP
                     IGGADMPVVISLLNSLTGIAAAMAGFIYGNQAMILGGIFVGSAGSILTLLMCKAMNRS
                     LINVIVGAFGGGGAGVNKEQGNIKEITLSDAAVLLSYSQKVVIVPGYGLAVAQAQHVC
                     NDLVKLLESKGVEVKFAIHPVAGRMPGHMNVLLAEADVPYTKLIEMDDINPDMPNTDV
                     TIVIGANDVVNPAAYDDPSSPIYGMPIINAHESKNIIVMKRGMGKGYAGIENELFFND
                     KTRMLFGNAKDSLQALVSEIKEL"
     gene            1856..2275
                     /locus_tag="QF480_00255"
     CDS             1856..2275
                     /locus_tag="QF480_00255"
                     /inference="COORDINATES: protein motif:HMM:NF020157.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1761 domain-containing protein"
                     /protein_id="HJN05022.1"
                     /translation="MEGLKINHAAVWVGVVVLFALGFVWYDLLFGEQWVEFVGLDMAE
                     IEANPPGYGLWISNIIASALGMYLLAWLFAGLNITSGSKGAIVGFLIAFVFIFLTTMI
                     NNMYAQSPYGLAWILGGYSMVGYTINGFIIGAWTMKK"
     gene            complement(2423..3823)
                     /gene="rmuC"
                     /locus_tag="QF480_00260"
     CDS             complement(2423..3823)
                     /gene="rmuC"
                     /locus_tag="QF480_00260"
                     /inference="COORDINATES: protein motif:HMM:NF014680.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HJN05023.1"
                     /translation="MEFYLLITSIILIVILIIISITNKGGKQDTSNLKNEITTIFKEE
                     LVETRRENRELNKENREENNTLFKGLQDSLVKSYNDFKDSIKTDAKENREELNKGLKS
                     FEDKFSDNIKDFNEQLRQRFNDLSKQQTEFNKLTKDSIKDIKETIEKQLVAIREDNTI
                     QLNEMRKTVDEKLQTTLEKRLGESFKQVSERLELVHKGLGEMQKLATGVGDLQKVLSN
                     VKTRGILGEYQLGNILEQILTPEQYSTNVATKKGSQANVEYAIKLPGKIDENEVWLPI
                     DSKFPIENYQLLLDAYEEANKNKIENAQKLLLKAIVGFAKTISEKYIDPPNTTDFGIM
                     FLPVESLYAEVLRHPGTFDKLQRDYHITVTGPTTLSALLNSLQMGFQTLTVQKRSSEV
                     WKVLSGVKAEFGKFSEHLAKVHKQIDTASTSLDTLRNTRTNAMERKLRGVETQGTLKP
                     EDTVEFPLTNDMEDEV"
     gene            4034..4807
                     /locus_tag="QF480_00265"
     CDS             4034..4807
                     /locus_tag="QF480_00265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013613329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HJN05024.1"
                     /translation="MEYEILKTEIVDGIATVTISRPNAMNALNTRFFNEMDQLVDEIS
                     NNNDVKVMIITGEGKAFVAGADIAEMVDKNSEEGSAFSRLGQNTFSSFGKMDIPVIAA
                     INGFALGGGLELAMGCDFRIASSKAKFGQPEVSLGLIPGYAATQRLPRLTGMGDALYL
                     LMTADMITADEAFRIGLVQKVFEPELLMEEAYKIAKIIMSKGPDAIKKIKNVVRLGME
                     MSFANGEKLEADQFGTLFGEGTQGKEGMSAFLGKRKPEW"
     gene            complement(4822..>5496)
                     /locus_tag="QF480_00270"
     CDS             complement(4822..>5496)
                     /locus_tag="QF480_00270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05025.1"
                     /translation="YSGFYTTVKTSRLNNYNFSWFERNNCNQGSKFKVEDNCQQCEAI
                     MLEGIVRKQADNSFVSNINLVGEWNEQINIPFSTGGTPVYIDWDQGNQCSSCYVDPAV
                     SPLLIDNMCSQELISLPLTDDSQTTMAITATFIGSCDSDTNIVVLPSFGLWIRPVDAT
                     CWRWSSMNNGVAQICSVIYGETYVLGTYYDGKWKQWTITISNEETYTFAIDFSQSVCL
                     NAFGIL"
BASE COUNT         1646 a          885 c         1077 g         1888 t
ORIGIN      
        1 aataaagaaa ttgtgagtga cagattgaaa gacttttata ataaataaaa aatatagttg
       61 atggaaaatt tgcttgttta cttttatgaa aataaagata tgattttcat aattgccctg
      121 tccatatttc ttggtgtaga ggtaatttcc aatgtacctt cagtactaca cactccactt
      181 atgtcgggag caaatgcaat tagcggtgta ataataattg gaggtataat ccttcttggt
      241 cacactgata tgacaggttt cagcctgaat ttagtattgg gaatatttgc tgtgatattc
      301 ggtgcattaa atgtatttgg tggatttgtg gttaccgacc gcatgcttga aatgtttaaa
      361 aagaaaaaga agaaatagat atggagacta cattatatga tcttggagta acggcaggtg
      421 atgtatttct agagataagt tatcttctgg ctgctatatt ttttgtaatc gggctgaagt
      481 tgatgagtca tccggaatca gctcgaaaag gtaatttttg ggccggtgga ggtatgggcc
      541 tggcaatggt tacaacctta tttctccaca cagatgagac aggtgcacat attggtatga
      601 caaatgttat tgtaattata atcgccatcg ccattggtgc catactagga tctctggtag
      661 cgcgtaaagt gaagatgaca gccatgccac agcttgtttc ggtatttaat gcaacaggtg
      721 gagctgcatc agcattggtt gcattaatgg aatattcaaa cccagcaaac acttctgcag
      781 tagttacact gctcggatta ataataggaa caatagcctt tagcggaagt atgatagctt
      841 atggaaaatt agacggtaaa gtcggagaca tttttgccgg ttgggtcaaa tactttaaca
      901 ttttcttgtt attggtaatt gctgcgctaa cggtttacat gcttgtattc gatgtaagtt
      961 ctgaaatgca aacagtactt tcttatatat tactgactct tgcacttatt tacggaatta
     1021 tgtttgttat gcctattggt ggtgctgata tgccagttgt aatttcacta ctaaattcac
     1081 taaccggtat tgctgcggct atggctggat ttatttacgg aaatcaagca atgatacttg
     1141 gtggtatctt tgttggatcg gcaggatcga tacttacatt attaatgtgc aaagctatga
     1201 acagatcact aataaatgtt attgttggtg catttggcgg aggaggagct ggtgttaata
     1261 aagagcaggg aaacataaag gaaattactc ttagtgatgc agcagttcta ttaagctatt
     1321 cacaaaaggt agttattgtt ccgggatacg gacttgctgt agcacaagca caacatgttt
     1381 gcaacgatct tgttaagttg cttgaaagca agggcgttga ggttaagttt gccattcatc
     1441 ccgttgccgg aagaatgccc ggacatatga atgttctatt ggctgaagct gatgttccat
     1501 atacaaagct tatcgaaatg gacgacatca atcctgatat gccaaatacc gatgttacaa
     1561 tagttatcgg tgcgaatgat gtagttaacc ctgctgcata cgacgatcct tcaagcccga
     1621 tttatggaat gccaataatc aatgcccatg aatcaaaaaa tattattgta atgaaacgtg
     1681 ggatgggtaa aggctatgca ggtattgaga acgaattatt tttcaatgat aaaactcgta
     1741 tgttattcgg gaatgctaag gattcactac aggccctggt aagtgaaata aaagaattat
     1801 aattgcttga aaattaagtt atatttttca atatgtctca ttaatactaa ttatcatgga
     1861 aggtttaaaa attaatcatg ctgccgtttg ggtaggagtt gtcgtacttt ttgcattagg
     1921 ttttgtttgg tacgatctgt tatttggaga acaatgggtt gagtttgtag gattagatat
     1981 ggctgaaata gaggctaatc ctccaggtta tgggttatgg ataagtaaca taatagcaag
     2041 tgcattagga atgtatttat tggcatggct ttttgctggg cttaatatta catcaggctc
     2101 aaaaggagct attgtcggat tcttgattgc tttcgtattt attttcctta ctacaatgat
     2161 taacaatatg tatgctcaaa gtccttacgg gctagcatgg atattaggag gttatagtat
     2221 ggttggatat actattaatg gatttattat tggagcctgg acaatgaaaa agtaattgtt
     2281 tattgagcta aacaattcag ctgattgtca ttcagtattt caattttttt attagaatag
     2341 ccagcctaat taataggtat aacttcagtc aaaccaccca attaaggttt gagttgatgg
     2401 ttatgtatta tgctctgttt tcttatactt catcctccat atcattagtt agtggaaact
     2461 caacagtatc ctctggtttt aaagtgccct gtgtttctac tcctcttagt tttctctcca
     2521 ttgcatttgt ccgcgtattt cttaacgtat caagagatgt tgaggcagta tcaatttgtt
     2581 tatgaacttt agcaagatgc tctgagaatt tgccaaattc agctttcacg ccagaaagta
     2641 ctttccaaac ttcactgctt cgtttttgta ccgttagcgt ttggaatccc atttgtagac
     2701 tattaagtaa tgctgataaa gtagttggtc cagttactgt aatatggtaa tctctttgaa
     2761 gtttatcaaa agttccagga tgtcgaagca cttcagcata tagactttcg accggaagaa
     2821 acattatgcc aaagtccgtt gtatttggtg ggtcaatata tttttcacta attgtttttg
     2881 caaaacccac aatggctttt agtaacaact tttgtgcgtt ttcaatttta tttttgtttg
     2941 cttcttcata tgcatcaagt agtagctgat agttttcaat ggggaatttg gagtcgatag
     3001 gtagccaaac ttcattttca tcaatcttac ctggcaattt aattgcatat tcaacattgg
     3061 cctgacttcc tttttttgtt gcaacatttg ttgagtattg ctctggcgta agaatttgct
     3121 ctaaaatatt tcccaattga tattcaccaa ggatacctcg tgttttcaca ttggataaaa
     3181 ctttttgaag atcaccaaca ccggttgcaa gtttctgcat ttcgccaaga cctttgtgta
     3241 ctaattccag acgttcgctt acctgcttaa atgattcacc aagtcgcttc tcaagagttg
     3301 tttgcaactt ttcatcaaca gttttgcgca tttcgtttag ctgaatagta ttatcctctc
     3361 ttatcgcaac aagttgtttt tcaatagttt ccttaatatc tttaatactg tcttttgtta
     3421 gcttgttaaa ttccgtttgt tgtttactta aatcattaaa tctttgacgt aactgttcat
     3481 taaagtcttt gatattgtca gaaaatttat cttcaaatga ctttaaacct ttgtttagtt
     3541 cttcacggtt ttcttttgca tcggttttaa tactatcttt aaaatcattg tagcttttta
     3601 caagtgaatc ctgcaaaccc ttaaaaagag tattattctc ttccctattc tctttattca
     3661 actccctatt ttcacgtctt gtttctacta attcttcttt aaatattgtt gtaatctcat
     3721 ttttaagatt gcttgtatcc tgtttcccac ctttatttgt gatggaaata attatcagga
     3781 tgacaattag tataatgctg gtaatcagta aatagaattc catttaattg taaattaata
     3841 tttgataaat ttattactta ttttttgatt attgataagg aatgataaaa tggttaaatg
     3901 cgtgaatgat tgaatgaaaa aatgtgggct tgataaatga taaaattatt atatctgcaa
     3961 gaacaaattt aatcattcgc tcattagtac attctttttt gctaactttg agttttacta
     4021 aataattaat gaaatggaat acgaaatact taaaactgag atagttgacg gcattgcaac
     4081 agtgaccatt agcagaccaa atgcaatgaa tgcgcttaat accagattct ttaacgaaat
     4141 ggatcagttg gttgatgaaa tttctaataa taacgacgtt aaggttatga taataactgg
     4201 tgaaggaaaa gcatttgttg ccggagcaga tattgctgaa atggttgaca aaaacagtga
     4261 ggaaggttct gcgttttcac gtttgggaca aaatacgttt agcagctttg gaaaaatgga
     4321 tattccggta attgcagcta ttaatggttt tgctttagga ggtggccttg agctagctat
     4381 gggatgtgat tttcggatag caagttcaaa ggcaaaattt gggcaacccg aagtgagctt
     4441 aggtttaata cctggctacg cagcgacaca acgattacca agacttaccg gaatgggtga
     4501 tgccctgtat ctgcttatga ctgctgatat gattaccgct gatgaggcat ttcgaatagg
     4561 cttagtacaa aaggtatttg agcctgagtt attgatggag gaggcttata aaattgctaa
     4621 aatcattatg tcaaaaggac ctgatgctat taaaaaaatc aaaaatgttg ttagactcgg
     4681 tatggagatg agctttgcta atggtgaaaa actagaagct gaccaatttg gaactctatt
     4741 tggtgagggt actcaaggaa aagaagggat gagtgcattt ttaggaaaac ggaaacccga
     4801 gtggtaagac gtaaatatta attacaagat cccaaaagca tttaaacaaa ccgattggga
     4861 aaagtcaata gcaaaagtat atgtctcttc gttagaaatt gttattgtcc attgcttcca
     4921 cttaccgtca taataggtgc caagaacata tgtttctcca tatattacgc tacaaatttg
     4981 tgcaacacca ttattcatcg atgaccatct ccagcatgtg gcgtcgacag gccttatcca
     5041 taaaccaaat gatggcagca caactatatt tgtatcagaa tcacagctac caatgaaggt
     5101 ggctgttatt gccatagttg tttgactatc atctgttagt ggtaaactga ttaactcttg
     5161 agaacacatg ttgtctatta acaatgggct aacggcagga tcaacataac aggaactgca
     5221 ttgatttcct tgatcccaat caatataaac cggagtacca cctgtagaaa atggtatatt
     5281 aatttgttcg ttccattctc caacaagatt tatatttgat acaaacgagt tgtcagcctg
     5341 cttacgtaca ataccttcaa gcattattgc ttcacattgc tgacaattat cttctacttt
     5401 aaattttgat ccctgattgc aattgtttcg ttcaaaccaa ctgaaattat agttattcaa
     5461 ccttgatgtt tttacagtgg tatagaaacc actata
//
LOCUS       DASCQP010000017         1779 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000046230, whole genome shotgun sequence.
ACCESSION   DASCQP010000017 DASCQP010000000
VERSION     DASCQP010000017.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1779)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1779)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1779
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000046230"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1617
                     /locus_tag="QF480_00275"
     CDS             <1..1617
                     /locus_tag="QF480_00275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007656620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit"
                     /protein_id="HJN05026.1"
                     /translation="IHTIVGAGNASGSLDASNMFKPALARGELQCIGATTLDEYRQYI
                     EKDGALERRFQKILVDATSAEETVHILNNIKEKYEDHHLVKYSKESIDACVQLTNRYI
                     SDRFLPDKAIDALDEAGAMVHISNIHVPTEIINLENSIEEIKTNKTKAIKSQKFEEAA
                     QFRDIERRYTDELVRAKKRWSDDAKVHRENVTEDHVAEVVAMMTGIPMKNIAQSEGNR
                     LINMEPELNKEVIGQTVAVKKVVKAIRRNRAGLKDPHKPIGTFIFLGPTGVGKTYLAK
                     MLAKYIFDSQDALIRVDMSEYMEKFAVSRLVGAPPGYVGYEEGGQLTEKVRRKPYSII
                     LLDEIEKAHPDIFHLLLQVLDDGQLTDGLGRKVDFKNTIIIMTSNIGSRQLKDFGTGV
                     GFSTKAKVEARTSHAQGVIETALKRAFAPEFLNRIDDVVIFEPLERKEIHKIIEIELA
                     NLFERINMLGYKMKVTAKAKDFIIDKGWDEQFGARPLKRAIQKYIEDQLAEEIISAKL
                     TEGTIVNVGYDTKKDEIKITFTKPKEIEKV"
BASE COUNT          648 a          280 c          363 g          488 t
ORIGIN      
        1 atccacacaa ttgtcggggc tggtaatgca tcaggatcac tggatgcctc taacatgttt
       61 aagccggcac tagctcgcgg agaattacaa tgtataggtg caacaacgtt agacgaatat
      121 cgtcaatata ttgaaaaaga cggagctctt gaaagacgtt tccagaaaat actggttgat
      181 gccacttctg ccgaagaaac agtacatatt cttaataata ttaaagagaa atatgaggat
      241 catcacctgg taaaatattc gaaagaatct atagatgctt gtgttcagct tactaacaga
      301 tacatttcag acagattttt gccagacaaa gctattgatg cattggatga ggccggagcc
      361 atggtacata ttagtaatat ccatgttccc actgaaataa taaatcttga aaattctatt
      421 gaagaaataa agacaaacaa aactaaagcc ataaaaagcc aaaagtttga agaagctgca
      481 caatttaggg atattgaacg tagatataca gatgaactgg ttagagcaaa aaaaagatgg
      541 tcggacgatg ctaaggtaca tcgcgagaat gttactgaag atcatgtggc tgaagttgtt
      601 gctatgatga ccggaattcc aatgaaaaac attgcacaaa gcgaaggtaa tcgtttgata
      661 aacatggaac cggaactgaa taaagaggtt attggtcaga cagtagcagt taaaaaggtt
      721 gttaaggcca taaggcgtaa ccgggctgga ttaaaagatc ctcataaacc aattggaacc
      781 ttcatatttt taggccctac aggagtagga aaaacatatt tagcaaaaat gttagccaaa
      841 tatattttcg actcacagga tgctctaatt cgtgttgata tgagcgaata tatggagaag
      901 tttgctgtat caagacttgt tggtgcacct ccgggatatg tgggatatga agaaggcgga
      961 caattaactg aaaaagtcag gcgaaaacct tattctatta ttcttctgga tgagatcgag
     1021 aaggctcatc ccgatatttt ccacctgcta ttacaggtac ttgacgacgg gcagttaact
     1081 gacggattag gacgtaaagt tgactttaag aatactatta taatcatgac ttccaacatt
     1141 ggttcacgcc aattaaaaga ttttggtact ggtgttgggt ttagcactaa agctaaagtt
     1201 gaggctcgta catctcatgc acaaggtgtt atcgaaacag ccttgaaaag agcttttgcc
     1261 cctgagtttc ttaaccgaat tgatgatgtg gtgatatttg aaccacttga aaggaaagaa
     1321 attcataaga ttattgaaat tgaattggcc aatctttttg aaagaataaa catgcttggt
     1381 tacaaaatga aagtaaccgc aaaagcaaag gactttatta tcgacaaagg ttgggatgag
     1441 caatttggcg caagaccact taaaagggca attcaaaagt atattgaaga tcaactcgcc
     1501 gaagaaatta tatcagctaa attaactgaa ggaacaatag ttaacgttgg atatgatacc
     1561 aaaaaggatg aaataaaaat aaccttcact aaaccaaagg aaattgaaaa agtgtaaaat
     1621 aagcttttac agtaacgctt acacttgaaa atccaggtca attcttttaa aaaattatat
     1681 tatttaattt aaatgcaaat tttatctttg tcgcacttat taattaatta aacatagaaa
     1741 tgaaatcaaa agctgctatt cgaggtgggg aatttttaa
//
LOCUS       DASCQP010000018         2286 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000047059, whole genome shotgun sequence.
ACCESSION   DASCQP010000018 DASCQP010000000
VERSION     DASCQP010000018.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2286)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2286)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2286
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000047059"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            126..1100
                     /locus_tag="QF480_00280"
     CDS             126..1100
                     /locus_tag="QF480_00280"
                     /inference="COORDINATES: protein motif:HMM:NF012568.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HJN05027.1"
                     /translation="MKNYEKLIEYFEVKLNEIVYNDKPLELYSPIKYTLSFGGKRIRP
                     VTTLMGCELFCDDYQKALPQAIAIELFHNFTLIHDDIMDIAPIRRGRETVFKKWGSNI
                     AILSGDTLFALAYQYAQQAEKDILHDILNVFNKTAIEVCEGQQFDLNFEINNNVTVDQ
                     YINMIRLKTGVLFGASLKIGALIGGAQKEDADLLYDFGVNIGLGFQLKDDLLDTFGNE
                     GVFGKKTGGDIITNKKTFLFIKALEIADNETKEELLSLYNTSDIDPDQKVKSTQAIFT
                     KYKVDILTGMEIDKNFIKGIESLDKIQVASEKKMYLREVAVKMIDRNK"
     gene            complement(1121..>2286)
                     /locus_tag="QF480_00285"
     CDS             complement(1121..>2286)
                     /locus_tag="QF480_00285"
                     /inference="COORDINATES: protein motif:HMM:NF012235.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HJN05028.1"
                     /translation="NNQQKEINEVQRFIERFRYKASKAKQVQSRVKQLQRMDKLELDD
                     VDKSSIHFLFPPAPHSGKVTIDGKNISKQYDDSLILDNIDFEVLKGEKVAFLGRNGEG
                     KSTLAKIITNKISYTGNLKMGFQVCTGYFAQDQGEMLDPELTVFETIDNVAVGDIRKR
                     INSILGAFLFQGEDVNKKVKVLSGGEKSRLSLALLLLQPSNLLLLDEPTNHLDLRSKD
                     ILKNALLQYNGTLIIVSHDRDFLHGLTERVYEFKNKRIKEFRGDIELFLEKRKLESLS
                     ELEAKEKSTSNKRNKDITNKNKWESKKEHEKKIRKLRNEISNLEKIIEENELLLNAIN
                     EKLSTPHKYEQEIKSGELYRQHERVNVDIQKAFNQWELKQQELDKLQNDGIIQ"
BASE COUNT          733 a          388 c          366 g          799 t
ORIGIN      
        1 atcgatgcaa tacagttaag aaaaattgcc gaacctcttg ttaaaagtgg ttatggacag
       61 tatttacttg accttattga ttaagaagtg ttttccaaag actgaaaatg gaaacctaaa
      121 tttttatgaa gaattacgag aagttaatag aatattttga agtaaagctt aacgaaatag
      181 tttataatga taaacctctt gaactttata gtcctattaa atatactcta agttttggtg
      241 gcaaacgcat taggccggtt acaactttaa tgggttgtga attattctgt gatgattacc
      301 aaaaagcatt accccaggca attgcaattg agctgtttca taattttact cttatccatg
      361 atgacataat ggatattgca ccaataagaa gaggcaggga aacagtgttt aaaaaatggg
      421 gttcaaacat tgcaatacta tctggtgata ccttatttgc gcttgcttat caatatgctc
      481 aacaagctga aaaggacata cttcatgaca tattgaatgt atttaacaaa actgcaatag
      541 aggtgtgcga aggtcagcaa tttgacctta attttgaaat aaacaacaat gttaccgttg
      601 atcaatacat aaatatgatt cggctcaaaa ctggagtatt gtttggagcc agcttaaaaa
      661 ttggagcttt aattggcggt gcacaaaagg aggacgccga ccttctttac gattttggtg
      721 ttaacatcgg actgggtttt caattgaaag acgatttgtt agacaccttt ggaaatgaag
      781 gtgtttttgg aaagaaaaca ggtggtgata tcattacaaa caaaaaaact tttcttttta
      841 tcaaggcttt agaaattgct gataatgaaa ctaaagaaga attattatca ctttataata
      901 cttctgatat tgaccctgac caaaaagtta aatcaaccca agcgattttc acaaagtata
      961 aagtcgatat cttaacgggc atggagattg ataaaaattt tattaaagga attgaaagcc
     1021 tggataaaat tcaagtagct tccgaaaaaa agatgtacct tagggaagtg gctgttaaaa
     1081 tgattgatag gaataaatag aatgaaggtg aacaattgta tcattgtatt attccatcat
     1141 tctgaagctt atcaagttcc tgttgcttta attcccattg gttaaaagcc ttctgaatat
     1201 ctacattaac tctttcgtgt tgcctgtaaa gttcacctga ttttatttcc tgctcatact
     1261 tatgaggggt ggacaatttt tcgtttattg cattgaggag tagctcgttt tcttcaatta
     1321 ttttttccaa attgctaatt tcattcctca acttacgtat ctttttctca tgctcttttt
     1381 tgctttccca cttgttttta ttagttatat ctttattcct tttgttactt gtagactttt
     1441 ctttagcctc caattctgat aaagattcta actttcgttt ctcaagaaaa agttcaatat
     1501 cacccctaaa ctctttaatt cttttgtttt taaactcata cactcgttcg gttagaccat
     1561 gcagaaaatc acgatcatgc gaaactataa tgagggtacc attatattgt aataaagcat
     1621 ttttcagtat gtccttggat ctaaggtcaa gatgatttgt tggctcatcc aataataaca
     1681 aattactagg ttgcaataaa agtaaagcaa gcgacaaacg tgatttttca ccacctgaaa
     1741 gtactttaac ttttttgtta acatcttcac cctgaaacaa aaatgctcca agaattgaat
     1801 ttatcctttt tctaatatca cctactgcta cattgtcaat ggtttcgaat actgttaact
     1861 ctggatcaag catctcacct tggtcctgag caaaatatcc tgtgcaaact tgaaaaccca
     1921 ttttaagatt acctgtataa ctaattttat tagtaataat ttttgcaaga gttgatttcc
     1981 cttctccatt ccgtcccaaa aatgcaactt tctctccttt aagaacttca aaatctatat
     2041 tatccaaaat cagcgaatca tcatattgct ttgaaatgtt ttttccatcg attgtgacct
     2101 tcccactatg cggagccggt ggaaataaaa aatgaatgga acttttatca acatcatcca
     2161 attcgagttt atccattctt tgcaattgct taacacgcga ttgtacttgc tttgccttag
     2221 aagctttata tctgaatctt tctataaatc gttgaacttc attaatttct ttttgttgat
     2281 tgttta
//
LOCUS       DASCQP010000019         7186 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000048515, whole genome shotgun sequence.
ACCESSION   DASCQP010000019 DASCQP010000000
VERSION     DASCQP010000019.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 7186)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7186)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7186
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000048515"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..633
                     /locus_tag="QF480_00290"
     CDS             <1..633
                     /locus_tag="QF480_00290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine dehydrogenase
                     (aminomethyl-transferring)"
                     /protein_id="HJN05029.1"
                     /translation="SALVLLISYGYLKLLGAKGLTDATKIAILNANYMMNELKDHYPI
                     LYRGNNGWVGHEMILDCNQFSKTAEVMVVDIAKRLMDYGFHAPTVAFPVHGTLMVEPT
                     ESEPLLEMKRFVEAMKSIREEIREIEDGRSKKVNNVVVNAPHTAEMLIANHWEMPYAR
                     ESAAYPLEWVREDKYFTPVAKIDDAFGDRNLCTCLPLEEYNEDDYSVGDQ"
     gene            complement(641..1387)
                     /locus_tag="QF480_00295"
     CDS             complement(641..1387)
                     /locus_tag="QF480_00295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004365851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HJN05030.1"
                     /translation="MDIYGLIGKNISHSFSPDYFTKKFNELGIDAEYKLFELNDAKEF
                     PEFISNNSEIKGLNVTIPYKRALGQYMDFIDEPASICGSINTIKIGHENNETFLSGYN
                     TDIDGFEKSIKPILKNRKNVKALILGSGGGANSVAYVLRKLGILFGFVSRKPEKILHY
                     NYTWLGKHEIHDSLLIINTTPLGMYPNDKDFPPIPYQYITDKHILYDLIYNPSETLFL
                     QKGREHGAFCMNGLEMLELQADASWDIWTK"
     gene            complement(1390..2301)
                     /locus_tag="QF480_00300"
     CDS             complement(1390..2301)
                     /locus_tag="QF480_00300"
                     /inference="COORDINATES: protein motif:HMM:NF015951.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF368 domain-containing protein"
                     /protein_id="HJN05031.1"
                     /translation="MRSYFIFILKGMAVGLANIIPGVSGGTIALITGIFERLINAIKS
                     FGITTLTLLIKGKFKAFAEKTDLYFLISLFVGVIISLVAIAHIFGLLFEKYPVFIWSF
                     FFGLILASVYFVGKTITNWKISVVISFIVGTIIAILFAFFSPASQDDNFFYLILCGVV
                     AVCSMILPGLSGSFVLILMGNYQLVAIDAINNRDINILLPVLIGAIIGLVTFSHIIAW
                     VFKKYKDQTIGVLTGFILGSLVIIWPWKIPIEKMFGDKLKPIGYDYFLPELNSEFSIA
                     ILIMTFGVLSIWIMERSAANVETKEIN"
     gene            complement(2562..3524)
                     /locus_tag="QF480_00305"
     CDS             complement(2562..3524)
                     /locus_tag="QF480_00305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013611070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HJN05032.1"
                     /translation="MKYNSDVEAIDAFVEKYNILRQEIGKVIVGQDDIIKNTLISIFS
                     QGHALLVGVPGLAKTLLVNTISEVLGLSYNRIQFTPDLMPSDIIGTEILDENRKFKFI
                     KGPVFANIILADEINRTPPKTQSALLEAMQEKSVTVAGNSYKLEAPFFVLATQNPIEQ
                     EGTYPLPEAQLDRFMFNLILNYPTLNEELEIVSRTTGGTIDKVSEIIKRDEILFFQDL
                     IRKIPVAENVMDYAVNLVSKTRPGTPAAHEWANRYLNWGAGPRACQFLIIGAKVHAAL
                     TGKYSPDIEDVKAIVHPVLRHRIIRNYKAEADGISVDKLITELM"
     gene            complement(3544..4950)
                     /locus_tag="QF480_00310"
     CDS             complement(3544..4950)
                     /locus_tag="QF480_00310"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF012846.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HJN05033.1"
                     /translation="MNIIRLLSNKQLVHANVNTLRSFLLIGCLSLLSIAVAQEQDEYV
                     IDQVVAVVGKSIILESDIQNQYLVYRDRGGISGGASEIKCRVLEEVLFQKLMVTQAEI
                     DSIEVSQVQVEADLDRRLSSFIQQFGSQEKMEDYYGKTLVEIKKELYNIVLEQMLAQQ
                     VQSGIVSEVDVTPSEIRSFFKSIPEDTIPLIKTEYIIAEIVKNPPISIEEKLRIKEQL
                     NDIRKRILDGSSFSTLAIMYSQDPGSAKNGGELGFYGRGQLYPEFETVAFKLKEGEIS
                     NILETEAGYHIIQMIERKGDYINVRHILLTPKVSSLDLAIAKRQLDSIATLIKSDSIT
                     FLQAVVQFSEAENINNGGIIINPYTMSTTFEAEQLDPQVSFVIEKMKVGEISNPVPMK
                     TEDKKDAYRILLLKNKTQPHKANLTEDYSRIRDWALQDKQIKTVGKWINNRAKNTYVR
                     IIDEYKLCNFDNKWSENN"
     gene            complement(4980..5831)
                     /locus_tag="QF480_00315"
     CDS             complement(4980..5831)
                     /locus_tag="QF480_00315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HJN05034.1"
                     /translation="MRKIVSYLVILALLTGCINTLKDNNSPLLARVHDKYLYISDIQG
                     IVPDNSTPRDSIALIRSYVNDWVRTNVMIYQAQQNLPAGQLDFTKQLEDYRNSLIIYR
                     YETKLIDQTLDTIVTDNDIESYYNTHSSDFELKENITKAVYVIIEDDLEIEEKYDQIF
                     SLPDSLLFDSLAYYTTTNTVSLYLDTTKWLSFYNVQQIIPIETYNRELFLKNNRFVKI
                     VTDRYLYFVKFIDFKIKDDISPLDFKRNDIYNIIISRRKVRLAKKVRNDIYERALKND
                     EFEIYYH"
     gene            complement(5851..>7186)
                     /locus_tag="QF480_00320"
     CDS             complement(5851..>7186)
                     /locus_tag="QF480_00320"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF025002.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HJN05035.1"
                     /translation="VRTKYGYHIIKVTDIKDAMGYAEVAHIFVALRPEASTEDSIRKV
                     EKINNIYSKIQDGLSFEDAVAEYSEDRGSIKNQGKLSKFSCNRVVPEFVKIVDNLEID
                     DVSEPVKTAYGFHIIKLINVEKPGTLEEESARLKERLTKDQRSRKSEDVVIAKIKIEN
                     KFKIYPEAITEIINAIDTSVLNKRFVADPLIGMTLPVMKLRKEKYTQYDFARFVQTNQ
                     RIQDNIDKDVYLNQLFTNFENENCINFMDKNLEDQYPEFKELVQEYHDGILLFNLTDD
                     KIWTKAVKDTVGLQEYFFNNGDDYNWGERVNATVYELKDNTVLDKVSLIIEQNDNDGD
                     IAKALDDDSIRSVQILPDVFEKGDDKYVDMVDWKIGISGPINSDVEELIVFVKISEII
                     PPRAKKLDEARGLVTADYQAFLEKEWIEQLKKKYPVRMNKEVLDLIISDHKN"
BASE COUNT         2264 a         1282 c         1111 g         2529 t
ORIGIN      
        1 tctgcattgg tattattgat atcatacgga tatttgaagc tgctcggagc caaaggatta
       61 acagatgcta ctaaaattgc catattgaat gctaattaca tgatgaatga actaaaggat
      121 cattacccaa ttttgtatcg tggtaataat ggctgggttg ggcacgaaat gattcttgat
      181 tgtaatcaat ttagcaaaac agccgaggtt atggttgttg atattgcaaa aaggctaatg
      241 gactatggtt tccacgcgcc cacggttgct tttccagtac atggtacttt aatggttgag
      301 ccaacagaaa gtgaacctct attagaaatg aagcgttttg tagaagctat gaaatccata
      361 agggaagaaa ttagagaaat tgaggatggt agaagtaaaa aggtaaataa tgttgttgta
      421 aatgcgccgc acactgcaga aatgcttatt gctaatcatt gggaaatgcc ttatgcacgt
      481 gagtctgccg cttatccact tgaatgggtt agagaggata aatattttac tccagttgct
      541 aagattgatg atgcatttgg tgatagaaat ttatgtacat gtttaccttt agaggagtac
      601 aatgaagatg attattcagt aggggaccag taacctcacc ttatttcgtc caaatatccc
      661 atgaagcatc ggcctgtaat tcaagcattt caagtccatt catacaaaaa gctccatgct
      721 cacgtccttt ttgaagaaat aaagtttccg aaggattata aatgagatcg tatagaatat
      781 gcttatcagt aatatattga taaggaattg gagggaaatc tttatcatta ggatacatac
      841 cgagaggagt agtgtttata atcagcaggc tatcatgtat ttcatgttta cctaaccaag
      901 tgtagttata gtgtaatatt ttttctggtt ttcttgaaac aaagccaaac agtataccta
      961 gttttcgcaa cacataagct actgagtttg caccaccacc tgaacctaaa atgagtgctt
     1021 ttacattttt tctgtttttc agtattggtt taattgattt ttcgaagcca tcaatatcag
     1081 tattataacc ggaaaggaat gtttcattat tctcatggcc aattttaatt gtgttgatag
     1141 aaccacaaat agatgcaggt tcatcaataa aatccatata ttgacctagt gctcttttgt
     1201 aaggtatggt aacatttaaa cctttgattt cagagttatt ggatataaat tctggaaact
     1261 cttttgcatc gtttaactca aagagtttgt attctgcatc aattcccaat tcattgaatt
     1321 ttttagtgaa ataatccggg gaaaatgaat gtgatatgtt ttttcctatt agaccgtaaa
     1381 tatccatggc tagttaattt ccttagtttc tacatttgct gcacttcgct ccataatcca
     1441 aatacttaaa actccaaatg tcattattaa tatagcaata ctaaattcgc tgtttagttc
     1501 aggtaaaaag taatcgtaac caatgggctt aagtttatcg ccaaacattt tctcaattgg
     1561 aattttccaa ggccaaataa taactagtga gcctaaaata aagcctgtaa gcactccaat
     1621 agtttggtct ttatattttt taaaaaccca tgctataata tgcgaaaatg ttactaaccc
     1681 aataatagca ccaattagaa caggtagtag tatgtttata tccctattat ttattgcatc
     1741 aatggcaaca agttgataat tccccattag aattagtacg aaagatcctg ataatccggg
     1801 taatatcatt gagcatacag caacaactcc acaaagtatt aaatagaaaa aattatcatc
     1861 ttgacttgcg ggtgaaaaaa aagcaaacaa tattgcaatt attgttccca cgataaagct
     1921 aataactaca cttattttcc agtttgtaat agtttttcct acaaaatata cagaagctaa
     1981 aataagaccg aaaaagaacg accaaatgaa tacagggtat ttttcaaaga gtagtccaaa
     2041 aatgtgagca attgctacaa gagaaataat tactcctaca aataaggata tcagaaaata
     2101 tagatcagtt ttttcagcga aagctttaaa cttacctttt atcagcaatg ttagagtagt
     2161 aattccaaat gatttaattg cattgataag cctttcaaaa attcctgtaa ttaacgcaat
     2221 tgtgccaccc gatacacccg gaataatatt tgccagtccg acggccatcc ctttcaaaat
     2281 gaaaataaaa taagatctca tttattaatt caatttaatt cgggacttgt tcatcctcat
     2341 taaagagcca aataataccc aataagtatc atagtaatac cttaccagac aaaactctgc
     2401 tgtcaaatat atatcttttt ttgttagttg catttattta tcggctaaaa gttttgatca
     2461 aaatgtatgc agataattat agatggagta atgaattttt ataaaaatcg ataatacggg
     2521 tattgtaata aaaataaact aaaacgcttt tattgccaaa tttacatcaa ctctgtaatc
     2581 agcttatcta cacttattcc atcagcctca gctttataat tccgtataat acggtggcgt
     2641 agtacagggt gaactattgc cttaacatct tcaatatcgg gagagtattt accagttaat
     2701 gcagcatgaa cctttgcacc aattattaag aactgacaag ctcttggccc tgctccccaa
     2761 ttaagatatc ggtttgccca ttcgtgtgcg gcaggagttc ctggacgagt ttttgaaacc
     2821 aagttaacgg catagtccat aacattttca gcaactggta ttttgcgaat taaatcttga
     2881 aagaataata tttcatccct ttttattatt tctgatactt tatcaattgt tcccccggtt
     2941 gtcctactaa caatctctaa ttcttcattt aatgtaggat agttgagtat taaattgaac
     3001 ataaaccgat ctaattgagc ctctggtaag ggataggttc cttcctgttc aattgggttt
     3061 tgagtagcaa ggacaaagaa tggtgcctcg agcttgtacg aattaccagc aactgtaacc
     3121 gatttttctt gcatcgcttc taacaatgcc gattgagttt ttggaggtgt acgattaatt
     3181 tcatcagcaa gtatgatatt agcaaaaaca ggccccttaa tgaatttgaa ttttctgttc
     3241 tcatcaagta tctcagtccc tattatatca gaaggcatta aatcgggtgt aaactgtatt
     3301 ctgttataac ttaatccgag tacttcacta atagtattta ccaataaagt ttttgcaagt
     3361 cccggaacgc caacgagaag tgcatgtccc tgactaaaaa ttgaaatgag tgtattctta
     3421 attatatcat cttgtccaac aattactttc ccaatttctt gtctaagaat attatatttt
     3481 tctacgaaag catcaattgc ttcaacatca gaattatatt tcatagttgt tatctattta
     3541 taactaatta ttctcactcc atttattatc aaaattacat agcttgtatt catcaataat
     3601 cctgacataa gtgttttttg ctctgttgtt aatccatttg cctacagttt ttatttgttt
     3661 atcctggagg gcccaatcac gtattcgtga gtaatcctca gtaaggtttg ccttatgtgg
     3721 ttgtgtttta ttctttaaca atagtattct gtaagcatcc tttttatctt cagttttcat
     3781 tggaacagga tttgagattt cgccaacttt cattttctca ataacaaatg aaacctgtgg
     3841 gtcgagttgc tcggcttcaa aagttgtact catagtgtaa ggattaataa ttattccgcc
     3901 attattaata ttctccgctt cagagaattg cacaacagcc tgtaaaaacg taattgaatc
     3961 agatttaatt aatgttgcaa tactatctaa ctgacgttta gcaatggcaa ggtctaaaga
     4021 gctaactttt ggagttaaaa gtatatgtcg aacattaata tagtcacctt ttctttctat
     4081 catttggatt atatgataac ctgcttcggt ttcaagaata tttgaaattt cgccctcttt
     4141 gagtttaaaa gcaactgtct cgaattcggg atataactga cctctgccat aaaatcctag
     4201 ttcaccgccg tttttagccg agcccgggtc ctgtgaatac ataatagcaa gtgttgaaaa
     4261 gctactgcca tcaaggattc tttttctgat atcattcaat tgttctttaa ttctaagttt
     4321 ttcttcaatg cttattggtg ggtttttaac aatctctgcg atgatatatt cagttttaat
     4381 taatgggata gtatcttcag gaattgattt gaaaaacgac cttatttctg agggggtcac
     4441 atccacttca ctaacaatac cagattgtac ttgctgcgca agcatttgtt ctagaacaat
     4501 gttatagagt tcctttttga tttcaaccag agttttgccg taataatctt ccatcttttc
     4561 ttgtgaccca aactgctgaa taaaacttga tagtcttctg tcaagatcag cttctacctg
     4621 aacctgactt acttcaatgc tgtctatttc agcctgtgta accataagtt tttgaaacag
     4681 cacctcttca agaaccctgc actttatttc tgaagcacct ccacttatac caccgcgatc
     4741 tctgtaaacc aaatactgat tttgtatatc actttcgaga attatacttt tacccacaac
     4801 agccacaacc tggtcaatta catattcatc ctgctcctga gctacagcga tagacaaaag
     4861 tgacaaacat ccaattaaca aaaaggagcg taaagtatta acattggcat gaaccagctg
     4921 tttgttgctg agtagtctga ttatattcat tagttcagtt tatatttcta agttatagct
     4981 taatgataat atatctcaaa ttcatcattt tttaatgctc tttcgtagat gtcattccta
     5041 acctttttag ctaatctcac ttttcggcgt gaaataatta tgttgtaaat atcgttcctt
     5101 ttaaaatcaa gaggtgaaat atcatccttg attttgaaat cgataaattt tacaaaatag
     5161 agataacgat cggttacaat tttaacaaat cggttatttt ttaaaaataa ttccctgtta
     5221 tatgtttcga tagggataat ctgttgaacg ttgtagaaac tcaaccattt tgttgtatcc
     5281 aaatataatg aaacagtatt agtagtagtg taatatgcaa gtgaatcaaa aaggagtgag
     5341 tcaggcaaac taaagatttg atcatatttt tcttcaattt ccaaatcatc ttcaattatc
     5401 acataaacag cctttgtaat attttccttt aattcaaaat cagaagaatg agtattataa
     5461 tacgattcaa tatcattatc tgttacaatt gtatcgagtg tttggtcgat caattttgtt
     5521 tcgtaacgat aaattataag agagttccta taatcttcta attgctttgt gaaatcaagt
     5581 tgaccagcag ggagattctg ttgagcctga taaatcataa cattggttct aacccaatcg
     5641 ttcacatagc ttctaattaa tgctatactg tctcttggag tgctattgtc aggcacaatg
     5701 ccttggatat ctgaaatata caagtactta tcatgaactc ttgccaatag tggactatta
     5761 ttatctttaa gagtattaat acaccctgtt aataaagcca atattaccag atatgataca
     5821 attttcctca atatctactt agttaacaat ttagttttta tgatcactta ttatcaaatc
     5881 aagtacttcc ttattcatcc taacgggata ctttttcttt aattgctcta tccactcttt
     5941 ttcaaggaat gcttgataat cagccgttac aagtccacgt gcttcatcta atttttttgc
     6001 tcgaggagga attatctcac taatttttac aaaaactatg agttcttcca catcagaatt
     6061 tatagggcca gaaataccaa ttttccaatc caccatgtca acatacttat catcaccttt
     6121 ttcgaataca tcaggtagaa tttgtactga tcggatgctg tcatcgtcca gtgcttttgc
     6181 aatatctcca tcattgtcgt tttgctcaat aattagtgat actttatcta acacagtgtt
     6241 atccttcaac tcataaacgg ttgcattaac gcgctcaccc caattataat catcaccatt
     6301 gttaaagaaa tattcttgta acccaactgt gtctttaact gcttttgtcc atatcttatc
     6361 atcagttaag ttaaatagaa gaattccatc atgatattcc tgaacaagtt ctttgaattc
     6421 tggatattga tcttctagat ttttatccat aaaatttatg caattctcat tctcgaaatt
     6481 tgtaaaaagc tgattcagat aaacatcttt atcaatatta tcttgtattc tctgatttgt
     6541 ttgaacaaat ctggcaaaat catattgtgt atatttctct tttcttaatt tcattactgg
     6601 aagagtcatc ccaataagcg gatcagcaac aaatcttttg ttcaaaacag aagtgtcaat
     6661 tgcatttatt atttcagtaa ttgcctcagg ataaatttta aatttatttt ctattttaat
     6721 ttttgctatt actacatctt cgcttttacg tgatctttga tctttagtaa gtcgctcttt
     6781 tagccttgca gattcttctt ctaatgttcc tggtttttca acattaatga gtttaattat
     6841 atggaaacca taagctgttt taactggttc tgaaacatcg tcaatctcaa ggttatcaac
     6901 tattttaaca aattccggaa caactctgtt gcacgaaaac ttacttagtt taccttgatt
     6961 ttttatcgat cctctatcct cagaatattc tgcaacagca tcttcaaacg ataaaccatc
     7021 ttgaattttg gaataaatat tatttatctt ttctactttt cgtattgaat cttcggttga
     7081 ggcttcaggt cgtaaagcaa caaaaatatg ggctacttct gcataaccca ttgcatcttt
     7141 aatgtctgtt acttttatga tatggtatcc gtattttgtt cttact
//
LOCUS       DASCQP010000020         1972 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000051030, whole genome shotgun sequence.
ACCESSION   DASCQP010000020 DASCQP010000000
VERSION     DASCQP010000020.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1972)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1972)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1972
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000051030"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            120..1439
                     /locus_tag="QF480_00325"
     CDS             120..1439
                     /locus_tag="QF480_00325"
                     /inference="COORDINATES: protein motif:HMM:NF013324.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HJN05036.1"
                     /translation="MTNQKKERCAVKKEQYDELLKLGKVTEQEINISEEEKLDEKGAV
                     KKILEFIVLIFSVKKEENSYKDIKQRYSVNNIRVWVFTLLGYGILFLLILMMLSKLVF
                     QEEIKQNVLIASLIMLFHFIVSWFNIVGKKQRGAVYFFEKPLYNAGRGIHFIPWLICE
                     LDANSRTYFEDELPANPEKIHRVKRGEPDSVPVELLEKGYKPPLRITFTGLTKKEIKA
                     RKKSREEGIDVDDPLEERITVEVPGIVIWRIVDLIVFTQTIGDEAEAQKQMGDVFISM
                     MTTELSKVTLKKFLETKESYDGRLEYSLKELTKSWGIEIITARTKEYRGSRELNILIQ
                     GIAEAKAKKRSDALEGKGLGDREEAILRGRTEGFKYMKDKLGVTSESILSIETARKIA
                     EEVDTLVAVGGESAFTDLMKIAVTTTGILNSKDKVPAEIETKEVDHE"
     gene            1432..>1972
                     /locus_tag="QF480_00330"
     CDS             1432..>1972
                     /locus_tag="QF480_00330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05037.1"
                     /translation="MNKEQTIFVTFIGVLAIYVIYKLIKPLIKQGGSNGKISEKIEDL
                     KKSCFKYSHFILIFSGYVVVNMVFSKAFPEVWAGWKSSNLFWWSQIAIVLSFYLFTLK
                     NYSRAMAVGIWIFLIVVVSYSNWPEPPPNGTGAGSSYVQVQAMQSEKGSVTLVKKTPD
                     LMKFKVIAPAGNERIAIDVP"
BASE COUNT          695 a          268 c          436 g          573 t
ORIGIN      
        1 catttttaat gcctaaagct tacgctttag gcattcgagt ttgcttgaca atataacatt
       61 cggtgatata atagcaatag aagtatagtt acattgggta attatacaaa ttcagatttt
      121 tgacaaatca aaagaaagag aggtgtgctg tgaagaaaga gcaatacgac gaactattaa
      181 agcttggtaa agtaacagag caagaaatta atattagcga agaagaaaaa ttagacgaga
      241 agggtgctgt gaagaaaatc ttagaattta ttgttctcat attttctgta aaaaaggaag
      301 aaaatagcta caaagatatt aaacaacggt attcagttaa taatattcgt gtatgggtat
      361 ttactttgct cggatatgga attcttttcc tcttaatctt aatgatgtta agtaagcttg
      421 tgttccaaga agagattaag caaaatgtac taattgcatc gttgattatg ttgtttcact
      481 tcattgtaag ttggtttaat attgtaggta aaaaacaacg tggtgctgtg tatttctttg
      541 aaaagccttt atacaatgca ggtcgcggta ttcattttat accgtggctc atatgtgaac
      601 tggatgcgaa ctcacgaact tactttgagg atgaattgcc agcaaatcca gagaagatac
      661 atcgtgttaa acgaggcgaa ccggatagtg ttcctgtaga gcttttagag aaagggtata
      721 aacctccact tagaataaca ttcacaggat taacgaaaaa ggagataaaa gctaggaaga
      781 aatctagaga agaaggtatt gacgtcgatg atccacttga agaacgaatt actgtagaag
      841 ttccaggtat cgtaatttgg cgcattgttg atcttatagt gtttacacag actataggag
      901 atgaagcgga agcacaaaaa cagatgggtg atgtttttat ttcgatgatg acgacagaat
      961 tgtcaaaagt taccttgaaa aaattcttag aaacaaaaga gtcttatgat gggaggcttg
     1021 agtacagcct taaagaactt acaaaaagct ggggaataga gataattact gcgcgcacaa
     1081 aagaatatag aggaagtcgc gagttaaata tcttgattca aggaatagct gaagccaaag
     1141 caaaaaaaag atctgacgca cttgagggaa agggtttagg agatagagaa gaagctattc
     1201 ttagaggaag aaccgagggt ttcaagtata tgaaagataa actcggagtg acatcagaaa
     1261 gtatattgtc tatagagact gctcgtaaaa ttgcagaaga agtagatact cttgtggctg
     1321 ttggaggtga gagtgcattt accgatctga tgaaaattgc tgtaacaacc actggaatat
     1381 taaattccaa ggataaagta cctgccgaaa ttgaaacaaa ggaggtggac catgaataaa
     1441 gaacaaacaa tattcgttac ctttataggt gtactggcta tctatgtaat ttataaatta
     1501 attaaaccat taatcaagca aggtggaagt aatggtaaga tatctgaaaa aatagaagat
     1561 ttgaaaaaga gttgttttaa atattctcat tttattctaa ttttttcagg ttatgttgtt
     1621 gttaacatgg ttttctcaaa agcattccca gaagtgtggg caggatggaa aagtagtaat
     1681 ctattctggt ggtcacagat tgcaattgtt ctgtctttct atctcttcac attgaagaat
     1741 tacagcagag caatggctgt aggaatatgg atatttctta tagtagttgt aagctattca
     1801 aactggcctg agccaccacc aaatggcact ggggcaggaa gttcttatgt gcaggttcaa
     1861 gctatgcaga gtgaaaaagg gagtgtaact ttagtaaaga agactcctga tcttatgaag
     1921 tttaaggtta tagctcctgc tggtaatgaa cgcattgcaa tagacgttcc at
//
LOCUS       DASCQP010000021         4834 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000053999, whole genome shotgun sequence.
ACCESSION   DASCQP010000021 DASCQP010000000
VERSION     DASCQP010000021.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4834)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4834)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4834
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000053999"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..3911)
                     /locus_tag="QF480_00335"
     CDS             complement(<1..3911)
                     /locus_tag="QF480_00335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05038.1"
                     /translation="MKRAIIISISVLLAIVTTLFGLRHAIIGHAFKVSISKKTNQTIT
                     FNIGNAHYSVINSSISFTNSDFTFSNTFLNKERTIELSEIKFDELKLEGLSLLHLLFK
                     NELIASKFIISDPLLGFHENNNPIHFHEKPNEIIGSLEKHHDVLGNLTIIVDEIEITH
                     GEVDIMSMLLGEEHDGSVEFTFLIKDFRTSKEKNDENRTFFAKNHFVKLNNFYYSFPN
                     GDIISFDSIVLESDVNTIVTNNIRVEINSKSNQAKINPIIAEIDEIQVQGIDFDALER
                     LHELVIDSIAITDGTIHLIQNENKVSKLSPDTLTKNKDFLGPLRSVNLSSLMLNNINV
                     LNTSPEGDTIISLENLNLGVGKIQLDSTSIVNHIPNINYNTINLSSGNLKIIEKKSNL
                     RISLESILFSEKSGIISLIGLKANEKSINAHPTFMAKIDSIEVTGASAESFVKKQPMN
                     IGLLISNPIVELDLSNKTGRKAKKRNIDLDNFGISDIKILNGTINVFENNKLDLSVNG
                     IDFNSGQIQLSDLKKIHEINTDNLSLNASSIKVHIPDKNLLFTSGPISLLNNNITINQ
                     LSGHIKDEAKINSSINVNQLKLGSADIGEIIAEKKINLDYIKIVRPRIDGIINLNSEE
                     KGTTPKKPERKIDFGINIKDTRISEGKVDLTLNLKNEAIKLHSGVDITVENINFTNSS
                     DTTWLKELLWKVNLSQPVVDFQDYLISCSTIVSDSKAELLSLENIKIEQDPDISIDKR
                     LNINEISIRNINFSGLRYNTVLEKQTPIVGSISVESPYADIRIDSRISRTADDAKSKQ
                     KSITIPINLDEFVINNLSSKIEMQDSISISNLSLANLDLKYHKSSSDNIVDWLEYLRV
                     VDFSYSDTIKNSFVNIKKLNINNQNVTFGDIKGGNINKLSKTDNHLMYASSGFEISGI
                     AISQTIPHDIIINAINVKDFQIDIENHKTDNAVSSSSANKQIKLPGSLKSLDVELFSA
                     NNININHISITDTIVKKLELNQLGLLINSIKIDSTIVNDGDFQLAEQITVDLKGNKFV
                     SSDSLYATSLNTINYNFSENVLSVDSLRMKPRYKPAEFFKKAVYQTGKMDLVVGKINC
                     SNLRLKKLISDGSIHIGGVDVFGLDMRIFRNKKYKMDPELYKKMPQEALLTVPRVLTI
                     DSIKTHKAFIQYKQLSKKSIVPGEIFLDDVYLSAFNINNNLKVIDETSSMVVLFKAKL
                     LGASDLDLKLTLPILSPSYDFWVTGHLNMIDLTKLNSMTQNLVGVTMESGTGELEIPL
                     ISGNSIHSEGSILFKYKKLKIELYNRDHAENATGLGGSMANL"
     gene            complement(4056..4370)
                     /locus_tag="QF480_00340"
     CDS             complement(4056..4370)
                     /locus_tag="QF480_00340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05039.1"
                     /translation="MKIFKVLFFVAAISFVFAACNLPTTNESADEKVKNVKETTNETV
                     DEVIEFTDKIADTVKDKTVDGAEAIEAGVEGGIKSVKEGVDATGKELDSTGQEVKKKL
                     IK"
     gene            complement(4440..>4834)
                     /locus_tag="QF480_00345"
     CDS             complement(4440..>4834)
                     /locus_tag="QF480_00345"
                     /inference="COORDINATES: protein motif:HMM:NF040322.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05040.1"
                     /translation="ICMVNSSANIVLMGDFNDNPNNKSMQLITNSSLCEFDNPKLLSS
                     RSDVAGTLKYKGNWQNYDQFFVANALITGNNGLQCSSSGHIFDAEFLLEVDLQHLGMK
                     TKRTNIGYKYHGGTSDHLPIYIDIISIQ"
BASE COUNT         1554 a          832 c          684 g         1764 t
ORIGIN      
        1 aggttagcca tacttccacc cagccctgtt gcattttcag catgatcgcg attatacagc
       61 tcaattttta gcttcttgta tttaaacaat atcgagccct cgctgtgaat actatttcca
      121 ctaatcaatg ggatctccaa ttcgccggtt ccactttcca tagtaacacc cacaaggttt
      181 tgcgtcattg agttaagctt tgtaaggtca atcatattaa ggtgtcctgt tacccaaaaa
      241 tcataggagg gacttaatat tggtaacgtt aacttaaggt ctaaatcaga tgctcccagt
      301 aatttcgcct taaataatac aaccatcgag gatgtctcgt caataacttt taaattgtta
      361 tttatattga atgcagagag gtaaacatca tctagaaata tttcacctgg tactatcgac
      421 tttttgctga gttgcttata ttgaataaat gccttgtgag ttttaattga atcgattgtc
      481 aatacccgtg gaacagttaa caaagcttcc tgaggcattt ttttatagag ttctggatcc
      541 attttatact ttttattccg gaatatacgc atatccaatc caaatacatc aacgccacca
      601 atgtgaatac ttccatcact aattagcttc ttaagcctta aattactaca attaattttg
      661 cctaccacta aatccatttt gcctgtttga taaactgcct ttttgaaaaa ttcagcaggt
      721 ttataccttg gtttcatcct taaggaatca actgaaagaa cattctcaga aaaattgtag
      781 ttgatggtat tgagactggt tgcgtacaag ctatcggaag aaacaaattt atttcctttt
      841 agatctacag ttatttgctc agccaattgg aaatcaccat cattaacaat agtagaatca
      901 atttttatag agtttattaa caaaccaagt tggttcaatt ctagtttttt aactatagta
      961 tcagtaatcg aaatatggtt aatattaata ttattagcac taaaaagctc aacatcaaga
     1021 ctttttaacg aaccaggtaa ttttatttgc ttgttagccg atgagctaga aactgcatta
     1081 tcggttttat gattttcaat gtctatttga aaatctttaa cattaattgc gttaataata
     1141 atgtcatgcg gaattgtctg actaatagca ataccagaaa tttcaaaacc ggaggaggca
     1201 tacattaagt gattatcggt ttttgaaagc ttatttatat tgcctccttt tatatcaccg
     1261 aaggtaacat tttgattatt aatattaagc ttctttatat tgacaaaaga atttttaata
     1321 gtatccgaat aggaaaaatc aactactctt aaatattcaa gccaatcaac aatattatca
     1381 ctagatgact tatgatactt gagatcgagg ttggctaaac taagattgga aatagagata
     1441 ctgtcttgca tttctatctt agaagataaa ttattaatta caaattcatc taaattaatt
     1501 gggatggtta tgcttttttg cttgctctta gcatcatcgg ctgttctact aatacgactg
     1561 tcaatcctta tatcagcgta aggactttct acagaaatag acccaacaat gggtgtttgc
     1621 ttttcaagga ccgtattgta tctcaaaccc gagaaattaa tattcctgat gcttatttca
     1681 tttatattta gtctcttatc aatacttata tcgggatcct gctcaatttt tatattctca
     1741 agcgacagca attctgcttt actatctgac acaattgtac tgcaactgat taaataatct
     1801 tgaaaatcaa caacaggctg cgataagttg actttccata gtagttcttt tagccaggta
     1861 gtatcactgc tattagtaaa atttatgttc tcaacggtta tgtcaactcc tgaatgcaat
     1921 ttaattgcct cgttttttag gtttaaagtc agatcaactt taccttcaga aattctagta
     1981 tccttgatat ttattccaaa atcaatctta cgctcaggct tcttcggtgt agttcctttt
     2041 tcttcagaat ttagattgat gattccatct attcgaggtc taactatttt tatgtaatcg
     2101 aggtttattt tcttctcagc aattatttct ccaatatcag cacttcctag cttcaactga
     2161 ttaacattaa ttgatgaatt aattttagct tcatctttaa tgtgccccga aagttgatta
     2221 attgtgatgt tgttattcaa aagagatatt gggccagaag taaacagcaa gttcttatcg
     2281 ggaatatgca ctttgattga tgatgcattt agtgagagat tatctgtatt aatttcatga
     2341 atctttttga gatcgcttaa ctgtatttgt cctgagttaa aatcaattcc attaacactt
     2401 aaatctaact tattattttc aaaaacgttt atagtgccat ttaaaatctt gatatcagaa
     2461 attccaaaat tgtctaggtc tatattccgt tttttagctt ttcgtcctgt tttattactt
     2521 agatctaatt caactatagg attcgaaatg agtaatccaa tattcattgg ttgttttttt
     2581 acaaatgact cagctgaagc tcctgtaact tcaattgaat caattttagc cataaatgta
     2641 ggatgcgcat taatactttt ttcattagct tttaagccaa tcagtgatat gattcctgat
     2701 ttttcactaa acaaaatact ttcgagagaa attctgagat ttgacttttt ttcaattatt
     2761 tttaaattac cagaagaaag gttaatggta ttataattaa tgttcggtat gtgatttaca
     2821 attgaagtag agtcaagttg aatcttccca acacctaaat tcaggttttc cagacttata
     2881 attgtatccc cctctggact agtattcaat acattaatat tattcaacat taacgaactc
     2941 agattcacac tacgtaaagg acctaaaaaa tctttatttt ttgttaaagt atcaggtgat
     3001 agcttagata ctttattttc attttgtatt aaatgtatag ttccatctgt tattgcaatg
     3061 ctatcgataa caagctcatg caatctttca agtgcatcga aatctattcc ctgaacttgt
     3121 atctcgtcta tttcagcaat tattggatta attttagctt ggttggattt actgtttatc
     3181 tcaaccctta tattattagt cacaattgtg ttaacatctg attctaaaac aatagagtca
     3241 aaacttatta tatcgccgtt agggaaactg taataaaaat tatttagctt aacaaagtgg
     3301 ttttttgcaa aaaacgtcct attctcatca ttcttttctt ttgatgttct aaagtccttt
     3361 attaaaaatg taaactcaac agatccatca tgttcctcac caagtagcat tgacataatg
     3421 tcgacttctc catgagtaat ttcaatttca tcaacaataa tggttaagtt accaagtaca
     3481 tcatgatgtt tttctaaact tccaattatt tcatttggtt tttcatggaa gtgaatagga
     3541 ttattgtttt catgaaaacc taataatgga tctgatataa taaatttact tgcgatgagc
     3601 tcattcttga aaagcagatg taacaaagac aggccttcta gtttaagttc atcgaattta
     3661 atttcagaaa gttcaatggt tctttcctta ttaagaaaag tattactaaa agtaaagtct
     3721 gagtttgtaa atgaaattga agaatttata acgctataat gagcattgcc aatgttaaaa
     3781 gtaattgtct ggttggtttt tttgctgata ctgactttaa aagcgtggcc tataatagca
     3841 tgtcgtaaac caaaaagggt agtaacaata gctaataaca ctgaaatgct aataataata
     3901 gctcgtttca tttaatattt ttatgtgaga ttttatgaaa atcaaggcat aaaactatca
     3961 catatcattt taatcgtttt aagaaaaaat gatattaaag taattctcaa atacacttaa
     4021 tgtaaaaaaa ggaactttta ttctaacaaa agctactatt ttataagctt tttctttact
     4081 tcttgccccg tagaatccag ttctttcccg gttgcatcta cgccttcttt aacagactta
     4141 atgccaccct ctacacctgc ctcaattgct tcagcaccat ctacagtttt gtccttaact
     4201 gtgtctgcaa tcttatcggt aaattcaatt acctcatcca cagtctcatt agtagtttct
     4261 ttcacattct taaccttttc atctgcactt tcattagttg taggtagatt acatgctgca
     4321 aaaacaaaac taattgctgc tacaaaaaac aatactttaa aaattttcat atccccaaat
     4381 ttatttgtta ataccaattc acaaatttaa taacatttct caattaaaaa aaccctaaat
     4441 cattgaatag aaattatatc aatatatatt ggaagatgat cactggttcc tccatgatat
     4501 ttataaccga tatttgttcg tttagttttc attccgagat gttgtaaatc aacttccagt
     4561 aaaaactcag catcaaaaat atgaccagat gaagagcatt gtaatccatt attaccagtt
     4621 attagtgcat ttgcaacaaa aaactggtcg taattttgcc aattaccttt atatttaaga
     4681 gttccggcaa catctgatct tgagcttaat agcttcggat tatcgaactc acataacgaa
     4741 gaattagtaa tcaattgcat gcttttgtta ttagggttat cgttaaaatc gcccatcaat
     4801 actatattag cacttgaatt aaccatacaa attg
//
LOCUS       DASCQP010000022         3613 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000060851, whole genome shotgun sequence.
ACCESSION   DASCQP010000022 DASCQP010000000
VERSION     DASCQP010000022.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3613)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3613)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3613
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000060851"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..2846
                     /locus_tag="QF480_00350"
     CDS             <1..2846
                     /locus_tag="QF480_00350"
                     /inference="COORDINATES: protein motif:HMM:NF016906.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="right-handed parallel beta-helix
                     repeat-containing protein"
                     /protein_id="HJN05041.1"
                     /translation="IVYQDLIISGGVILSIKEGVVVKIDNALGIIVTNGSIKVEGTKT
                     DSVNFVPNHSSPGQIWKWSGLIIRNANTENKSSINYAKLIDAETAIKIENSWEVVVEN
                     SSIFNCQNIGVNIINSSSCLVLNCTIENNYDGIEMLAGYLESTSNNVIYECIVRNQNH
                     NIYIFREEGGGCRNNLILRNLIESGNNGIWIDNSGGEVVSENIIEQNFIINNGAGVGY
                     GIFLAHDSTVVSNNIFWENNIAILSEAKGDNCIIRNNSFYQNNNAISIGGGSEGNKHL
                     NNTFSLNTTELLGIKETQGVEFRRNNLLNNKGFEDIVVNSTPFDLSITGNYWGTVDSS
                     QISRLIFDGNENPDLGILYYTPFLSSIDTSNPMSPPYHVIKQIIDNKVQISWHANQEP
                     DLMAYRVYYGNYSNYSFSKEDEAGMDTSFVFPGDISIYDPIAVTAFDSTIVANNGQLF
                     GHESPFAFAVLYPYAGNDTIICEFTNELEIVNSNIPFGYQSINWSTSGDGLFNNTNIL
                     NPIYFPGSLDIQNGGATITLKVNSVVGSFEDEFRLSIIDNPVAFAGNDTVVAADSEIF
                     LDEAVAQHFESVIWFTSGDGSFDNDTLVNPIYFPGFSDTESDIVYLEMIAYSVCGIAT
                     DTIAISIEPHFSVEGKIWTINKPANPGVVVAYIENKDATRAIQIENAESDGSFRFENL
                     ITGNYYLYALPDTNNSDNVVPGYYANKLKWQSAYLLPVDADVYDIDIHLPSTDFKLPT
                     GEGSISGHMVIPHNSKYNSDIYCIPWFDYNNNVFCSGGLSNVTVFLFNDSRTKLFDYT
                     LTDELGNFYFSELPFGNYIVDAEKAGFLSIPSPLISLSPEHKSETDVVLEINQQKIGI
                     SFDNDGSLENSISVFPNPAINELNIPYSNPLSLALQIEICDLFGNRVLKITIPVEQIS
                     EVIKLNINGLSPGLYFGQLINSSLITHFQFVKK"
BASE COUNT         1239 a          503 c          626 g         1245 t
ORIGIN      
        1 atattgttta ccaggatctg attatttcgg gtggtgtaat actatcaatt aaagagggtg
       61 ttgtggttaa aattgacaac gccttgggta taattgtaac aaatggaagc ataaaagtcg
      121 aaggaactaa gaccgactcg gtgaactttg taccaaatca tagcagccct ggacaaattt
      181 ggaaatggag tggtctgatt attagaaatg caaataccga aaataaaagt tctattaatt
      241 atgccaaatt aatagatgcc gagacagcta ttaaaataga aaattcttgg gaggtggtcg
      301 ttgaaaactc aagcatattt aattgtcaga atattggtgt taatattatt aacagtagtt
      361 catgtttagt gctgaattgt actatcgaga acaactatga tggtattgaa atgttagcag
      421 ggtacttgga atcaacatcc aacaacgtaa tctatgaatg tattgtaagg aatcagaatc
      481 ataatattta tatttttaga gaagaaggtg gtggatgccg caataatcta atacttagaa
      541 atctgataga gtctggaaac aatggtattt ggatagataa tagcggaggg gaggtagtct
      601 ctgaaaacat tattgaacaa aattttatta ttaataatgg agcaggggtt ggttacggaa
      661 tatttttagc tcacgattca acggttgttt caaataatat tttttgggaa aacaatatcg
      721 caattttaag cgaggctaaa ggcgataatt gtataattag aaataacagt ttttatcaaa
      781 ataataacgc aatttctata ggtggtggtt cagaaggaaa taagcatttg aataatactt
      841 tttcgttgaa tactacagaa cttttaggaa ttaaagaaac ccaaggtgta gagttccgta
      901 gaaataattt attaaataat aagggatttg aagatattgt agtaaatagt accccttttg
      961 atttatcaat cactggtaac tattggggaa cagttgactc atctcaaata agtagattga
     1021 tttttgatgg caatgaaaac cctgatcttg gcatattata ttatacccct tttcttagta
     1081 gtatcgatac tagtaatcct atgtcgcccc cctatcatgt aattaagcaa attattgaca
     1141 ataaagttca aatttcgtgg catgcaaatc aggaacctga cctaatggct taccgagtgt
     1201 attacggtaa ttattccaac tatagttttt cgaaagaaga tgaagcagga atggatacat
     1261 cattcgtctt cccaggagat atttcaattt atgatcccat tgctgttact gcttttgatt
     1321 ctacaatagt tgctaataat ggtcaactat ttggacatga aagtccattt gcttttgctg
     1381 tactatatcc ttatgctggt aacgatacaa ttatctgtga gtttacgaat gagctggaaa
     1441 ttgttaatag taatattcca tttggatatc agtctattaa ttggtcaact agtggtgacg
     1501 gactgtttaa caatactaat attcttaacc ctatatattt tccagggtcc ttagatattc
     1561 aaaacggtgg agctactatt acattaaaag taaacagtgt tgttggctct tttgaggatg
     1621 agtttagatt gtcgataatt gataatccag ttgcatttgc agggaatgac acggttgttg
     1681 ctgcagattc agaaatattc ctggatgagg cagtagctca gcactttgag agcgtaattt
     1741 ggtttactag tggagacggt agttttgata atgacactct tgttaatccg atttattttc
     1801 caggattttc tgacactgaa tcagatattg tttaccttga aatgatagct tattcagttt
     1861 gtggaattgc aacagatacc attgcaatta gtatagaacc gcatttctca gttgaaggaa
     1921 aaatttggac aattaataaa cctgcaaatc ctggagtcgt tgttgcatat attgagaata
     1981 aagatgcaac cagagccatt caaattgaaa atgctgaaag tgatggtagt ttcaggttcg
     2041 aaaatcttat aacaggtaat tactatttgt acgctcttcc cgacactaat aattcagaca
     2101 atgtcgttcc cggatattat gcaaataaat taaaatggca atcagcatat ttacttccgg
     2161 ttgatgctga tgtttatgat attgatattc atttaccatc cactgatttt aaacttccta
     2221 ccggagaagg ctcaatttct ggtcatatgg tgataccaca taattcaaaa tacaatagcg
     2281 acatttattg tattccatgg ttcgactata ataacaatgt gttttgcagt ggaggattat
     2341 caaatgttac cgtatttctt tttaatgata gtagaaccaa actctttgat tatacactta
     2401 ccgacgaact tggtaatttt tattttagtg aattgccatt tggtaactat atagtcgatg
     2461 ctgagaaagc tggatttttg tcaataccat ctcctcttat cagtttatct cctgagcata
     2521 aaagtgagac cgatgttgta ttggaaatta accaacaaaa gattggaatc tcatttgaca
     2581 atgatgggtc attggaaaat agtatttctg tttttcctaa tcctgcgata aatgaattaa
     2641 atattccgta ttcaaacccc ctttctttgg cattacaaat tgaaatttgt gatctttttg
     2701 gaaatcgtgt tttaaagata actatccctg ttgagcaaat atctgaagtt attaaattaa
     2761 acattaatgg attatcccca ggtttgtact ttggtcaact cattaattca agtctaatta
     2821 ctcattttca attcgtaaaa aaataattta gtaatatccc aattatctac ttgagcgtgt
     2881 ataagttgta gtgttttttt aaacaaaggc gaaatacaaa gcaaacaaga gtaatttaga
     2941 aagattctaa atactggcaa aaagaaataa ttgaaaaccc tgtactgttt ttagatgatt
     3001 gataaacaag ttattaacaa acaatatttt atatcctgct aatttacttt tccatagtgg
     3061 taacaacttt cttataagga gtaaaggtat attgttttta agctgtctta ataatgaaat
     3121 gttaaataat tgttaaaatc attcaaatgg gaaaataaga gtaagggtat ttgtgtactt
     3181 tagtgtctta gtattgattg aggacaatca tttaagtcag ataaaatgct gaagaatact
     3241 ttattcatac cttttttgca ttcaccttgt tatgtttata acaataattt tcacaatttc
     3301 ttcacaaaaa aatactcgta tttgtttgaa ttctaatatt ctaacattta ttttaggtta
     3361 tataataatt taaaactcta caatcaacaa ggaagcagat cgataaacaa ctaaatatat
     3421 aatcatttat gcatcaaata aaaagcaatt tttatgttga tgatttgcta tttaaattaa
     3481 tgcataataa tatagaacaa caaataaata ataatgaata aattttttaa ttaattaaca
     3541 aaaacactag tagtatgaag aaaattacaa ctttactatt attgatgatg tttataacat
     3601 cttcagcatt att
//
LOCUS       DASCQP010000023         4025 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000061305, whole genome shotgun sequence.
ACCESSION   DASCQP010000023 DASCQP010000000
VERSION     DASCQP010000023.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4025)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4025)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4025
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000061305"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..728)
                     /locus_tag="QF480_00355"
     CDS             complement(<1..728)
                     /locus_tag="QF480_00355"
                     /inference="COORDINATES: protein motif:HMM:NF014081.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HJN05042.1"
                     /translation="MKSRQNFSLSGNIVDLIANSIFKGTVYIEDGIIRKIVKQEVKED
                     HYILPGLIDSHIHIESSMLIPSEFAKLAVVHGTVATVSDPHEIANVLGIDGIKYMISN
                     GNKVPFKFYFGASACVPATPFETSGFQFHEAEMEELLGMKEIKYLSEMMNFPGVINRD
                     PWEMKKIEIARNHNKPIDGHAPGITSDDARKYAEAGITTDHECFSMKEALDKIEYGMK
                     IQIREGSAAKNFDALIDLMQEHED"
     gene            complement(852..1775)
                     /locus_tag="QF480_00360"
     CDS             complement(852..1775)
                     /locus_tag="QF480_00360"
                     /inference="COORDINATES: protein motif:HMM:NF040656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GYDIA family GHMP kinase"
                     /protein_id="HJN05043.1"
                     /translation="MSSEIQTWSSNGKLLITGEYLVMEGALSLAIPLNVGQSLTIIPN
                     SDKVVHWQANKPDGHWFFVELDLFNFNVTKTDNYELAQRLSEILSATRILSKDFLTSG
                     IGYNVVTDLEFDPDFGFGTSSTLIANIASWANVDAYKLLDLTFGGSGYDIACASSKNP
                     IVFQRIGDSINVSDVSFDPVFKKNLYFVYLGKKQNSTNSISHFKKHSNFTSVDVDAIS
                     AITKELLITSELAEFEALLAEHESIMESILNIPTAKSLYFKDYPGIIKSLGAWGGDFV
                     MLTNHYTEKEFRNLLQEGGFDTVFSYDSLVM"
     gene            complement(1772..3109)
                     /locus_tag="QF480_00365"
     CDS             complement(1772..3109)
                     /locus_tag="QF480_00365"
                     /inference="COORDINATES: protein motif:HMM:NF012588.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA reductase"
                     /protein_id="HJN05044.1"
                     /translation="MPKRRKRDFLIRGFSKLLKEDKLKIVSELMDNQVETMDLLKSFW
                     HLDKSKQEIFDEFSENTISNFYIPYGIAPNVVVNGHTYHVPVVIEESSVVAAASSASR
                     FWSERGGFKAEVIDVEKIGQVHFIWAGPKEKLVKVFDELKYYLRGATADTTKNMEKRG
                     GGIIDFELIDYTDSIENYYQIKVNFNTVDSMGANFINSCLEEFAPALQNFFKTHKIFS
                     KEEKECEIVMSILSNYTPNCVVKAWVECNFKDLDGLYGDMNGEHFARKFETAVKIAET
                     DVYRATTHNKGIFNGVDAVAIATGNDFRAIEAAGHAYATRDGKYRSLTKVILSDTSFK
                     YELKIPVALGTVGGLTSLHPLAKHSLEMLGNPSASELMMIVASVGLANNFAAIRSLVT
                     KGIQIGHMKMHLYNILNHIEATKEEKEKATEYFVDHKVSHGVVKQFIENLRKN"
     gene            complement(3126..3668)
                     /locus_tag="QF480_00370"
     CDS             complement(3126..3668)
                     /locus_tag="QF480_00370"
                     /inference="COORDINATES: protein motif:HMM:NF026080.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4468 domain-containing protein"
                     /protein_id="HJN05045.1"
                     /translation="MKKLIIIAILLSGIQLSAQVKKDLFIPVDAETNKIKFQGVIEEE
                     GDKYELFKRSIYWLNGFYKDPVRVTSVRDKETGKIVGRHRFRIYYWDRDSIKHIGGMI
                     NYTFTVEMKDSRYRYTIDEIILKSATNIPAEKWLNKDDPAYDPRWDGYLSQIADFVNN
                     WSSTLESKMKPEPEKVKDEW"
BASE COUNT         1256 a          790 c          594 g         1385 t
ORIGIN      
        1 tgatcttcat gttcttgcat aagatcgatg agtgcatcaa agtttttggc agcactaccc
       61 tctcgaattt gaattttcat gccatattca atcttatcaa gagcttcctt cattgaaaaa
      121 cactcatggt cggtagtaat accagcttct gcatactttc ttgcatcgtc gcttgtaata
      181 ccaggagcat gaccatcaat gggtttatta tgatttcttg caatctcaat ctttttcatt
      241 tcccagggat ctcgattaat aactcccgga aaattcatca tctcacttag gtattttatc
      301 tccttcatcc caagtaattc ttccatttct gcttcatgaa attggaaacc tgatgtttca
      361 aaaggggttg ccggcacgca tgctgatgct ccgaagtaaa atttaaaagg aaccttatta
      421 ccatttgata tcatatattt tattccatca atacccagta cattggcaat ttcatgggga
      481 tcggaaaccg ttgcaacagt tccatgaaca acagcaagtt ttgcaaattc ggaagggata
      541 agcatcgaac tttcaatgtg aatatgtgag tctataagtc ctggcaatat ataatggtct
      601 tccttaactt cctgcttaac tatttttcta atgattccat cttcaatata taccgttcct
      661 ttaaaaatag aatttgctat taggtcaaca atattacctg aaaggctaaa gttttgtctt
      721 gatttcatta aattatttgt ttacaaacta ttatgcaaaa ttacacaatc agagacacaa
      781 ttattaggat aactattttg agtttatagc attggtataa atactggatc gtgaactgtt
      841 aacaacttcg atcacataac aagactgtcg tatgaaaaaa ccgtatcaaa tcctccttcc
      901 tgtagaaggt ttctaaactc tttctcagta taatggtttg ttaacattac aaagtcacca
      961 ccccatgcac caagcgattt tataattcct gggtaatcct taaaatataa agactttgct
     1021 gtagggatat tcaatatgct ttccataata ctttcatgct cagctaataa cgcttcaaat
     1081 tctgccaact cgctggtaat taacaattct tttgtgattg cagaaattgc atcaacatct
     1141 acggaagtga agttgctgtg tttcttaaaa tgagatatac tattagttga attttgcttt
     1201 ttgccaagat aaacgaaata caaattcttt ttaaaaacag gatcaaagct cacatctgaa
     1261 acattaatac tatcccctat tcgttgaaaa acaattgggt ttttactact tgcacatgca
     1321 atatcatatc ccgaaccacc aaatgtaaga tcaagcaatt tataggcatc aacattagcc
     1381 cagctagcaa tatttgcgat taatgttgaa cttgtgccaa atccaaagtc aggatcaaac
     1441 tccagatcag taacaacatt atatcctata cctgaagtca gaaagtcctt tgacagtatc
     1501 ctggtggcac tcaatatttc acttaatctc tgagcaagct cataattgtc agtttttgtt
     1561 acattaaaat tgaacaaatc tagttccaca aaaaaccagt gtccatcagg tttgttagct
     1621 tgccaatgaa caactttgtc ggagttagga attatagtta atgattgtcc tacatttaaa
     1681 gggattgcga gagataatgc tccttccatt acaaggtatt cgcctgtaat taggagtttt
     1741 ccatttgatg accaggtttg tatttcagaa ctcaattttt gcgtaggttt tcaataaact
     1801 gtttaacaac accgtgcgaa actttatgat cgacaaaata ttcagttgcc ttctcttttt
     1861 cctcttttgt tgcttcgata tgattcaaga tattatagag atgcatcttc atatgaccta
     1921 tctggatacc ttttgtaacc aaagacctaa ttgctgcaaa attgttagcc aggccaaccg
     1981 atgcgactat catcataagc tcactcgcgg atgggtttcc taacatttcc aacgaatgct
     2041 tggctagtgg atggagtgaa gttaatccgc caactgttcc aagtgcgaca gggattttca
     2101 gttcatattt aaaggaagta tcacttaaaa taacttttgt taagcttcta tattttccat
     2161 cacgagtagc ataagcatgt ccagcagcct caatagctct aaaatcattc cccgttgcaa
     2221 ttgcaacagc atcaacacca ttaaaaatac ccttattgtg tgtagtagcg cgataaacat
     2281 ctgtttcagc aattttaact gcagtttcaa acttccgagc gaaatgctca ccgttcatgt
     2341 ccccatataa gccatcaaga tctttaaagt tacactctac ccatgcctta actacacaat
     2401 taggagtata atttgacaaa attgacatta ctatttcaca ttctttttct tctttactaa
     2461 atattttatg tgttttgaag aaattctgaa gagcaggggc aaattcttcg aggcaggaat
     2521 taatgaaatt tgctcccatc gaatcaactg tattaaagtt aactttaatc tggtaataat
     2581 tttcgatact atcagtataa tcgattaatt caaaatcgat aataccacca cccctttttt
     2641 ccatattttt agtagtgtca gcagtagcac ccctaaggta atattttagt tcatcaaata
     2701 ctttaacaag tttttctttg gggcctgccc aaataaagtg tacctgacca atcttttcaa
     2761 catcaattac ttcagcttta aaccctccac gctctgacca aaatcttgat gcggatgaag
     2821 ctgcggcaac caccgagctt tcctctataa caaccggtac gtgataagta tgaccattta
     2881 caacaacatt aggagcaatg ccatatggaa tataaaagtt cgagattgtg ttctcactaa
     2941 attcgtcaaa tatttcttgc ttagatttgt ctaagtgcca aaagctttta agcaaatcca
     3001 tggtttcaac ctggttgtcc atcaactcac ttacaatctt aagcttatct tcttttagaa
     3061 gtttggaaaa gccccttatt aagaaatcac gttttctcct ttttggcatt tgagtattat
     3121 ttcatttacc attcatcctt aaccttttcg ggctcaggtt tcattttgct ttcgagtgtg
     3181 ctactccaat tattaacaaa atctgcaatt tgacttagat atccatccca ccttgggtca
     3241 tatgcaggat cgtctttatt cagccatttt tcagcaggta tgtttgtagc cgatttaagg
     3301 ataatttcat ctattgtata acggtacctg ctatctttca tctcaacagt aaaagtatag
     3361 tttatcatac caccaatatg ctttatactg tctctatccc agtaatatat acgaaatcta
     3421 tgcctcccta ctattttgcc ggtttcttta tctcgaacgg aagtaacacg aacgggatct
     3481 ttataaaatc cattcagcca ataaatactc cttttaaata attcatattt atctccctcc
     3541 tcttcaatca ctccttgaaa cttaatttta ttagtttcag catctactgg tataaataaa
     3601 tcttttttta cctgtgctga taattgtatc cctgataaca gaattgctat aataatgagc
     3661 ttcttcatga tttatatttt ccgtttaaga tgaagcaaag ttaatggaaa atgtttgagt
     3721 tcagtttatt attataaaag ataaaggaat tattggaaag aagaatattt gctaattatt
     3781 caatttcgtt gaaacacctc tgttttatga ctattctcca caccagagta ttaattttgt
     3841 tataaactaa aactaagatt ccatcacatc aaattagtct aattctaaat tgtagggaaa
     3901 caaaaaaaag caatgaatac tttcatatat ttgttggtta ctttcattaa attattgaat
     3961 taataatgta ttaatttcta ctattatgag tgtgttatat tcttcaatta ccaaaaaaat
     4021 atgga
//
LOCUS       DASCQP010000024         1944 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000064968, whole genome shotgun sequence.
ACCESSION   DASCQP010000024 DASCQP010000000
VERSION     DASCQP010000024.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1944)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1944)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1944
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000064968"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            444..1031
                     /locus_tag="QF480_00375"
     CDS             444..1031
                     /locus_tag="QF480_00375"
                     /inference="COORDINATES: protein motif:HMM:NF016270.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF502 domain-containing protein"
                     /protein_id="HJN05046.1"
                     /translation="MNKSVTKRIVNYFFKGLLLLAPVTITFWAIIELFHLIDGLLKEV
                     IVSVIGREIPGLGIVLLLLLISGIGYLGSTIIFNPIVTYFDKLMARAPLIKILYTAVK
                     DLVSAFVGQKKRFTEPVLVKIGKDSCLEKIGFITNQDLSVIGMSDKKVAVYLPHSYAW
                     SGNLFIVSTEYITKVSASPTDVMKFVISAGVTNVE"
     gene            1037..1801
                     /gene="surE"
                     /locus_tag="QF480_00380"
     CDS             1037..1801
                     /gene="surE"
                     /locus_tag="QF480_00380"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009319608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008252 - nucleotidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HJN05047.1"
                     /translation="MTKKPLILITNDDGINAPGLRKLISLVEGLGDIIVIASEHPMSG
                     MSHAVTIQNPLRVKLIKEEADYKEYLTTGTPVDNVKLGKHKLAHRLPDLILSVINHGS
                     NAAVNIIYSGTMGAVLEGAIDRIPGIGFSLNDFSPHADFSHVDNYVISITKKVLSDGL
                     PTGVCLNVNFPVKTNKPLKGIKVCRQADARWVEEFEERTDPYGRTYYWLAGRFENGDD
                     RHDTDEKALADNYVSVVPSHTDFTAHDYVNKLDFTL"
BASE COUNT          629 a          323 c          358 g          634 t
ORIGIN      
        1 gtggctcttt tacatccgaa gctaggcagg ataatacacc aaatagaaaa acaagtaata
       61 tacttttgag aagcatccct ttaccaattt tcataatgta ttgatttcag gttttctaca
      121 aatataaata atctaggtaa ctttttaata tttcagtaat ttatttcata ttcaggtaat
      181 tgtataagat caaaacacat ctcctgagcg agtcttcaag cattggcttg tgtgtaagca
      241 ggactcgttt actaacatac tatggttata tttaatgcac aagtcatccc cgctcatgct
      301 ttccgcacaa gatttgtgct atgtggtgaa gacgcagagt tgcacagaga aataactaat
      361 taagattcat ttaaacattt aacaacccaa tgtttagtct caaatatttc taatttcgca
      421 tctctaaacc taaacataat atcatgaata agagtgtaac taaacgcatt gtaaattatt
      481 tttttaaagg attgttacta ttagcaccag taactattac cttttgggct ataattgaac
      541 tttttcattt gattgatggc ttgcttaaag aggtgattgt gagtgtgatc ggaagagaaa
      601 taccaggatt aggaatcgta ctacttctgc tattaatctc gggaattgga tatctcgggt
      661 ctactattat atttaatcca atagtcacat atttcgataa gcttatggcc cgggcaccac
      721 ttattaaaat attatatact gctgtaaagg accttgtttc agcatttgtt ggtcaaaaaa
      781 agcgatttac agaacctgta ttggttaaaa tcggaaaaga ctcttgttta gagaagattg
      841 gctttatcac aaatcaagac cttagtgtaa taggaatgtc agataaaaaa gtagccgtat
      901 atttgccgca ttcttacgct tggtcgggta atttgtttat tgtctctact gagtatatta
      961 caaaagtatc cgcttcacca accgatgtta tgaaatttgt tatttcggct ggtgtaacaa
     1021 acgttgaata gatagtatga ctaaaaaacc acttatatta attactaatg acgacggcat
     1081 taatgcgccg ggactacgta aactaatttc acttgtagaa ggtttaggag atataattgt
     1141 aattgcatct gaacatccta tgtcaggaat gtcgcatgca gttactattc aaaacccatt
     1201 gagagttaag cttatcaaag aagaggctga ttataaggaa tatctaacta ccggcacacc
     1261 tgtagataat gttaaacttg gcaaacataa gctagcacac aggcttcctg atctaatcct
     1321 ttcagttatc aatcatggtt caaacgctgc tgtgaatata atctattcag gaacaatggg
     1381 ggctgtgctg gaaggggcaa tcgacaggat tcccggtata ggattctcat taaatgattt
     1441 tagtcctcat gccgacttta gccatgttga taattatgtt atttcgataa caaaaaaagt
     1501 tcttagtgat ggtcttccta caggagtttg tctgaacgta aattttccgg tcaaaaccaa
     1561 taaacctcta aaaggtatta aagtttgccg acaagcagat gcaagatggg ttgaagaatt
     1621 tgaagaacgt acagatccgt atggccgtac ttattattgg cttgctggca gatttgagaa
     1681 tggtgatgac agacacgata ctgatgaaaa ggcattagcg gataattatg tgtctgtagt
     1741 accttcacat actgatttta ctgcacatga ctatgttaat aaactggatt tcacacttta
     1801 aataggagcg aatcatgcga ccaggaatac taaaaagaga tttgtggaca gtaggaatta
     1861 ctattggaat aattctacct cttatatttt ttatgtcact ttatattgtc gattatacac
     1921 tttatcattt ttggaatact cata
//
LOCUS       DASCQP010000025         2316 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000066157, whole genome shotgun sequence.
ACCESSION   DASCQP010000025 DASCQP010000000
VERSION     DASCQP010000025.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2316)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2316)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2316
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000066157"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1138)
                     /locus_tag="QF480_00385"
     CDS             complement(<1..1138)
                     /locus_tag="QF480_00385"
                     /inference="COORDINATES: protein motif:HMM:NF012398.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HJN05048.1"
                     /translation="MLKVTSPYNFKVIKEIPLMQHTDVENALKVAYNLFRDQAKWIPA
                     WQRIEILERVVDAMKEREEDFTNIAAEEGGKPYMDSKVEVLRAINGVKLAIEHIGQLA
                     GEQIPMGQTSSSVNRLAFTIREPIGVVVSISAFNHPLNLIIHQVVTAIAAGAPVIVKP
                     ALTTPLSCLEFVSILKEAGLPDGWCQTIICSDENAEKLATDNRVNYLSFIGSAKVGWY
                     LRSKLSPGTRCALEHGGVAPVIVEKDANIDEMLPALLKGGFYHAGQVCVSVQKVFVHE
                     DIVKEVSDRLTDMAKKLIVGDPLNPKTEVGPLILPHEVDRVEEWVEEAVASGGKLLCG
                     GKRISDSCFEPTVILDPSQNAKVSTLEIFGPVVCIYTYKNREEAI"
     gene            1252..2106
                     /locus_tag="QF480_00390"
     CDS             1252..2106
                     /locus_tag="QF480_00390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018336634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HJN05049.1"
                     /translation="MSYNLLKGKRGIIFGALDNKSIAWKVAERAHEEGASITLSNTAT
                     ALRFGQIDELAEKCDAEVVIADATKTEDLENVFERSMEIQGGKIDFVLHSIAMSLNVR
                     KKRVYNDLDYNFLNKTLDISAISFHKMLQVALKMDAINNWGSIVALSYIAAQRTLYGY
                     NDMADAKALLESIARSFGYIYGREKKIRVNTISQSPTVTTAGSGVKGVGSLLDFTERM
                     SPLGNANAKECADYCITLFSDLTRKVTMQNLFHDGGFSNMGMSLKAMHVYDKNLDNNL
                     KELNKRED"
     gene            2170..2243
                     /locus_tag="QF480_00395"
     tRNA            2170..2243
                     /locus_tag="QF480_00395"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2204..2206,aa:Met,seq:cat)
BASE COUNT          704 a          434 c          429 g          749 t
ORIGIN      
        1 taatagcttc ttctctgttt ttgtaggtat atatacacac aaccggacca aagatttcca
       61 aagtagatac ttttgcgttt tgagatgggt caagtattac agtaggttca aaacaactat
      121 ccgaaatacg ttttcctcca cataatagtt tccctccact tgctacggcc tcttcaaccc
      181 attcctcaac cctgtctact tcgtgcggaa ggatcaatgg tccaacttct gtttttggat
      241 taagaggatc tcctacaata agttttttgg ccatatcagt caacctatcg cttacttctt
      301 tcacaatatc ttcgtgaaca aatacttttt gtaccgaaac acaaacctga cctgcatgat
      361 agaatccacc ttttagcaag gcaggtagca tttcatcaat atttgcatct ttttcaacaa
      421 ttacaggagc tactccacca tgttctagag cacaacgtgt gccaggagac aactttgatc
      481 ggaggtacca tcctactttt gctgatccga tgaaagataa gtaattgacc ctattatcag
      541 ttgcaagttt ttcagcgttt tcatcactac atataattgt ctgacaccaa ccatctggta
      601 atcctgcttc ctttaatatg ctaacaaact ctaaacaaga aagaggtgta gtcaatgcag
      661 gtttaacaat aacgggtgca cctgcggcaa tagctgttac tacctggtga ataatcaaat
      721 ttaaagggtg gttaaaagca cttattgaaa cgacaacacc aattggttca cgaatagtaa
      781 atgccagtct gttgaccgat gaactagttt gccccattgg aatttgttcg cctgccaatt
      841 gaccaatatg ttcgatagcc aacttaacac cattaatggc tcgcagcacc tctacttttg
      901 agtccatgta cggtttgcca ccttcttctg cagcaatatt tgtaaaatcc tcttcgcgtt
      961 ctttcattgc atccacaacg cgttccagta tttcaattct ttgccacgca ggtatccatt
     1021 ttgcttgatc ccggaatagg ttatatgcga ctttcagagc attttcaaca tcagtatgtt
     1081 gcattaaagg gatttctttt ataaccttaa aattgtaagg tgaggttact tttagcatat
     1141 gtgaaatatt ttaaaattct gtatcggtaa aattaatagt atttctgatt acaaatactt
     1201 tttatctttg ccgcttggaa tcgatctaaa taatgataaa attaatttgg aatgtcatat
     1261 aatttgttaa aaggaaaaag ggggattatt tttggtgcac ttgataataa atcgattgca
     1321 tggaaagttg ctgaaagagc acatgaagag ggcgcttcaa taacattgag caatactgct
     1381 actgctctcc gttttggaca aattgatgaa ttggcagaga aatgtgatgc tgaagttgtt
     1441 attgcagatg ctacaaaaac tgaggactta gaaaatgttt tcgaacgatc aatggaaatt
     1501 cagggtggta aaatcgactt cgttctgcac tctattgcca tgtcgcttaa tgttagaaaa
     1561 aagagagttt ataatgattt agattataac tttttaaata aaacacttga tatatcagca
     1621 atttcattcc ataaaatgct tcaggtagcc cttaagatgg atgcaataaa caattggggc
     1681 tctattgttg cactatctta tattgctgct caaagaactc tttacggtta taatgatatg
     1741 gctgatgcga aagccttatt ggagtcaatt gccagaagct ttggctatat ttacggacgt
     1801 gagaagaaaa taagagtaaa cactatttca caatcaccaa ctgtgacaac agccggctca
     1861 ggagttaagg gggtaggtag tttgttagat tttaccgaac gaatgtcgcc tttgggaaat
     1921 gcaaatgcta aggaatgtgc tgattattgt ataactctat tttctgatct taccaggaaa
     1981 gttactatgc aaaacttatt ccatgatggt ggattttcca atatgggaat gagtttaaaa
     2041 gccatgcatg tttatgacaa aaatcttgat aataatctga aagaacttaa taaaagagag
     2101 gattaactat ttttctccgt ttcctattta cttaataatt gtttttatat ttttgcagcc
     2161 actaaaaatg gcgaggtagc tcagttggtt agagcgtcgg attcataacc cggaggtccc
     2221 gagttcaatt ctcggtctcg ctacaacaaa acccagtgca ttggcactgg gttttttaat
     2281 ttaaacgaat cccaaacttg tttggagatg atgttt
//
LOCUS       DASCQP010000026         4861 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000067218, whole genome shotgun sequence.
ACCESSION   DASCQP010000026 DASCQP010000000
VERSION     DASCQP010000026.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4861)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4861)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4861
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000067218"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..315)
                     /locus_tag="QF480_00400"
     CDS             complement(<1..315)
                     /locus_tag="QF480_00400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05050.1"
                     /translation="MISKPFQYSEPLFRPPSEARSLILQITNGCSWNRCSFCEMYTSK
                     KFQIKKEKEIFDEIDLLAPYSSQIRKVFLADGNAMVLSFDKLMNIIEKLNSTFPNLNR
                     ISI"
     gene            465..1472
                     /locus_tag="QF480_00405"
     CDS             465..1472
                     /locus_tag="QF480_00405"
                     /inference="COORDINATES: protein motif:HMM:NF027681.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HJN05051.1"
                     /translation="MILVTGGTGLVGSHLVFKLAVAGETPVVFKRSTSDILKTKKVFS
                     YYTNDVDSLFNKIKWIDGDISDFYSVLDAMEGISYVYHTAAIVSFQSSDKESIISANI
                     TGTKNIVNAALEKDIKKLVHISSIGVFGRSNNNDIVTEETHWNAKKSSAYSTSKYHAE
                     MEVWRGISEGLNAVIVNPSVILGPGNWDSGSSKLFSTMYNGLKFYSMGSNGFVDVKDV
                     VEAMIILMKSKTSSERYILNSENVSYKQLFFWMADSLDVKRPKYKATKFISEIVWRIL
                     WTKRFVTGKKSAITKETAETSRQIYNYSNDKFVEETAFKFISIKESINKNAKLFLSDQ
                     H"
     gene            complement(1479..1856)
                     /gene="acpS"
                     /locus_tag="QF480_00410"
     CDS             complement(1479..1856)
                     /gene="acpS"
                     /locus_tag="QF480_00410"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008897 - holo-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HJN05052.1"
                     /translation="MIFGIGTDIIEVKRMEKHLLNNDALKLKLYTQAEQQYCNKGKLT
                     QSQCFAARFAAKEAFFKALGTGYRYGMAFHEIEILNDELGKPYVVPHGKVKEYLEQQK
                     VKHIHLSISHVKEMANAFVVLEK"
     gene            complement(1903..3090)
                     /gene="kbl"
                     /locus_tag="QF480_00415"
     CDS             complement(1903..3090)
                     /gene="kbl"
                     /locus_tag="QF480_00415"
                     /EC_number="2.3.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004328142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008890 - glycine C-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006567 - threonine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine C-acetyltransferase"
                     /protein_id="HJN05053.1"
                     /translation="MYGNVKDHLINEINDIRNAGLYKEERIIVSPQQAEIKLNTGQNV
                     LNFCANNYLGLSNHPELIKAAEEGMDSHGYGMSSVRFICGTTDLHKTLEKKIADFFGT
                     EDTILYAAAFDANGGVFEPLLTAEDAIISDSLNHASIIDGVRLCKAQRYRYANADMAA
                     LEEELKKAQAQRFRIIVTDGVFSMDGNTAPVDKIVELAEKYDAMVMVDECHSAGVVGK
                     TGRGVSEHFDIMGKLDIITGTLGKAFGGAVGGFTTGKKEIIEMLRQRSRPYLFSNSLP
                     PMIVNAGIRMFDMMNETNELQDKLHENTDYFMEKMIAAGFDIKPTQSAICAVMLYDAK
                     LSQDMASKLLEEGIYVIGFYFPVVPKGEARIRVQLSAGHEREHLDKAIAAFTKVGKEL
                     KVI"
     gene            3216..4277
                     /gene="mnmA"
                     /locus_tag="QF480_00420"
     CDS             3216..4277
                     /gene="mnmA"
                     /locus_tag="QF480_00420"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012573356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004808 - tRNA
                     (5-methylaminomethyl-2-thiouridylate)(34)-
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA];
                     GO_process: GO:0002143 - tRNA wobble position uridine
                     thiolation [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HJN05054.1"
                     /translation="MKIAALVSGGVDSSVTIPLLKEQGFNPHIFYIKIGMEDQSAFMD
                     CPSEEDIEITQWIAKKYNCEFDIVDLQHEYWSSVVKYTIDSVKKGLTPNPDIMCNLLI
                     KFGAFNDKHGNEFDKIVTGHYATNYETEEGIFLSTAADKVKDQTYFLGNITYPQLQKT
                     MFPIGDLPKSQVREIATKIKLPSAGRPDSQGICFLGKINYSDFIKNQIGEMPGEIREL
                     ETNDLIGEHKGFWFHTIGQRRGLKLSGGPWFVVKKDIDNNIVYASKGYDPISRYNDTI
                     YLEDIHFLNPNHNYNNLRSIKFKIRHQPEFNSGILIQDEIGNKIVSDSSISGVAPGQF
                     TVIYDREEKTCIGSAVILG"
     gene            complement(4341..>4861)
                     /locus_tag="QF480_00425"
     CDS             complement(4341..>4861)
                     /locus_tag="QF480_00425"
                     /inference="COORDINATES: protein motif:HMM:NF013530.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HJN05055.1"
                     /translation="KWVLKQKKQPPFWAGLKFFNVYGPNEYHKDRMASVIFHALGQIL
                     KTKKVKLFKSHNSKFKDGEQLRDFIYVKDVIDVMLFLKNNKIESGIYNLGTGIARTFI
                     DLTNAIFAALQMEPNIEFIDTPEDIRDKYQYFTEANMEKLKGIGYNNTFTSLETGVND
                     YVTNYLVNNIYI"
BASE COUNT         1626 a          831 c          808 g         1596 t
ORIGIN      
        1 tattgatatc ctattaagat ttggaaatgt actattaagt ttttcaataa tgttcattag
       61 cttatcaaac gatagtacca ttgcatttcc atcagctaga aatacttttc gtatttgtga
      121 agaataagga gccaataaat caatctcatc aaaaatttct ttctcttttt ttatttgaaa
      181 tttttttgaa gtatacattt cacaaaatga gcaacggttc caagaacaac catttgttat
      241 ctgcaatatt aatgatctgg cttcgcttgg cggcctgaaa agtggctctg agtattgaaa
      301 tggtttagag atcatgaaac aaaaataaaa caaaacgaac tccatattaa aaaaaatatt
      361 tcatcattat attctacttt tttatgattc actatctact ttaacattta actttataat
      421 tttgctgtaa tcttgcattt acactttagc aattaatgag caatatgatt ctagttactg
      481 gtggtacagg tttggttggt tcgcacctag tttttaagtt agcagttgcc ggtgaaacac
      541 cagttgtttt taaacgatct acttctgata ttttgaaaac caaaaaggta ttttcatatt
      601 atacaaatga tgttgacagt ctttttaata aaataaagtg gattgatggg gatatatctg
      661 acttctattc tgtacttgat gcaatggaag ggataagtta tgtatatcat acagctgcaa
      721 tagtctcctt ccaatcttct gataaagaaa gtattatttc tgcaaacatt accgggacta
      781 aaaatattgt aaatgcagcc ttagagaaag acataaaaaa gcttgtacat attagctcaa
      841 ttggtgtatt tggaagaagc aataacaacg atattgttac tgaggaaaca cattggaacg
      901 cgaaaaaatc ttcagcatac tcaaccagta aataccatgc ggagatggaa gtttggcggg
      961 gaatctctga agggttaaat gcagttattg ttaacccgtc agtaatactt ggccctggta
     1021 attgggactc aggaagttca aaacttttta gcacaatgta taatgggctt aagttctatt
     1081 ctatgggttc aaatggattt gtagatgtaa aagatgtggt tgaagcaatg attatactta
     1141 tgaaaagtaa aacttcaagt gaacgataca tcctaaattc tgaaaacgtt agttacaaac
     1201 aactattttt ttggatggct gattcactgg atgttaaacg acctaaatat aaggctacaa
     1261 aattcatcag tgagattgtg tggagaatat tatggacaaa aagatttgta actggaaaaa
     1321 aatcagcaat tacgaaagaa acagcagaga catctcgtca gatatacaat tattcaaatg
     1381 ataaattcgt agaggaaact gcttttaagt ttatttcaat aaaggaaagt ataaataaga
     1441 atgccaagtt gtttctatct gaccaacatt agtgaagttt atttttccaa aactacaaat
     1501 gcatttgcca tctctttaac atgtgaaatt gagagatgaa tatgtttcac cttttgttgt
     1561 tcaagatatt ccttcacttt gccatgtgga actacataag gctttcccaa ttcgtcattt
     1621 agaatctcaa tttcatgaaa ggccattcca tagcgatagc ctgttcctag tgctttaaaa
     1681 aaagcttctt ttgccgcaaa acgagctgca aaacattgtg attgagtaag tttacctttg
     1741 ttacaatatt gttgttcagc ctgggtataa agtttcagct ttaaagcatc gttatttaat
     1801 agatgctttt ccattcgttt aacttcaatt atgtctgtac ctataccgaa tatcatatca
     1861 atgagaatag ttactagtta atagtgaaca gtgaatggac aattaaatta ccttgagttc
     1921 cttacccact tttgtaaacg cagcaattgc tttatccaag tgttcacgtt catgtcctgc
     1981 tgataattga actctaattc ttgcttctcc ttttggtaca acaggaaaat aaaatcctat
     2041 tacataaatt ccttcctcaa gtaattttga tgccatatcc tgtgaaagtt ttgcatcgta
     2101 taacataact gcacaaattg cagattgagt aggtttaata tcaaaaccgg ctgctatcat
     2161 tttttccata aaatagtcag tattttcatg gagtttatcc tgaagctcat ttgtttcgtt
     2221 catcatgtca aacatacgaa tgcctgcatt aacaatcatt ggaggtagag aattggagaa
     2281 caaataggga cgcgaacgct ggcgaagcat ctcaataatt tcctttttac cagtcgtaaa
     2341 accacccact gcaccaccaa aagctttacc cagggttccg gtaatgatgt ccagtttacc
     2401 cattatatca aaatgctcac taacacctct tccggtttta ccaacaacac cggctgagtg
     2461 acattcatca accataacca tggcatcata tttttctgca agttcaacaa tcttgtcaac
     2521 aggagcagtg tttccatcca tagaaaacac accatcggta actattattc tgaaacgctg
     2581 tgcttgtgct ttctttaatt cttcttccag tgctgccatg tcggcattag cataacgata
     2641 acgttgggct ttgcagagtc ttactccatc aattatagat gcatgattaa gactatctga
     2701 aattatagca tcttcagctg ttagtaatgg ctcaaagacc cctccatttg catcaaaagc
     2761 agctgcataa agaatagtat cttctgtacc gaaaaaatca gcaattttct tttctaaagt
     2821 tttatgcaga tcagttgtac cacaaataaa tcttacagat gacattccat aaccgtgtga
     2881 atccattcct tcttctgctg ctttaatcag ctcaggatga tttgaaagtc caagataatt
     2941 attggcacaa aaattaagca cattttgacc tgtgtttaac ttaatttctg cttgttgagg
     3001 gctaactatt attctttctt ccttatacaa accggcatta cgaatatcgt ttatttcatt
     3061 gattaggtga tcttttacat ttccgtacat gtctatattt tacttttcat tttttactaa
     3121 taatttctca aaagtaataa aactatgcat gattgtagca aagtaattca tttagtataa
     3181 ttcaacaaaa tgtcgacctt tgcacaaaat tttatatgaa aatagcagca ttggtttcag
     3241 gaggggttga cagctcggtt acaattcctt tattgaagga acagggattt aatccccata
     3301 ttttctatat aaaaatagga atggaggatc agtctgcctt tatggattgc ccttcagaag
     3361 aagatataga gataactcaa tggatagcca aaaaatataa ttgcgaattc gatatcgttg
     3421 acttacagca tgaatattgg tcatcagtag ttaaatacac aattgattct gttaagaaag
     3481 gattaacccc aaaccctgat atcatgtgta acttgttaat aaaatttggc gcatttaatg
     3541 ataaacatgg taatgagttt gataaaattg tgacaggcca ttacgctact aattacgaaa
     3601 ctgaagaagg aatcttttta agtacggcag ccgataaagt taaagatcaa acttattttt
     3661 tagggaacat aacctatcct caactacaaa aaacaatgtt tccgattgga gacttaccaa
     3721 aatcgcaagt tagagaaata gcaaccaaaa taaaactccc aagcgcagga agacctgata
     3781 gtcaggggat atgttttttg ggaaagatta actatagtga tttcatcaaa aatcaaattg
     3841 gtgaaatgcc aggagaaata agagaattag aaactaatga ccttattggt gaacataaag
     3901 gattttggtt tcatactatt gggcaacgaa gaggcctaaa actaagtggt gggccttggt
     3961 ttgtagtgaa aaaggacatc gataataaca ttgtatatgc atcaaaaggt tatgatccta
     4021 tatctcgcta caacgataca atatatcttg aagatatcca ctttctaaat cctaaccata
     4081 attacaataa cttgagaagt ataaagttta aaataagaca tcaaccggag tttaactcag
     4141 gaatacttat acaagatgaa attggaaaca agattgtgag tgattctagt atatcaggtg
     4201 tagctcctgg tcagttcaca gtgatttatg accgtgagga aaaaacatgt attggaagtg
     4261 cagtaatctt aggttgatat taatcttttt atcatttcaa tctatccaca tgtatggact
     4321 tacgcttaga acaattagca ttagatgtag atattattta caaggtagtt tgttacataa
     4381 tcattaactc ctgtttcaag tgaagtaaat gtgttattat aacctatacc cttaagcttc
     4441 tccatatttg cctcagtgaa atactgatat ttatcacgga tatcctcagg agtatcgata
     4501 aattcaatgt taggttccat ttgaagcgct gcaaatattg catttgtcaa atcaataaag
     4561 gtacgagcta taccagtgcc taaattatat attcctgact caatcttatt attcttcaag
     4621 aaaagcatca catcaatcac atccttaacg taaataaaat cgcgcagttg ttcaccatcc
     4681 ttaaattttg aattgtgcga tttaaataat tttaccttct tggtttttag aatctgcccg
     4741 agagcatgaa aaattactga agccattcta tctttatgat actcatttgg accgtataca
     4801 ttaaaaaact taagtccggc ccaaaaagga ggttgtttct tctgctttag cacccactta
     4861 t
//
LOCUS       DASCQP010000027         2411 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000069675, whole genome shotgun sequence.
ACCESSION   DASCQP010000027 DASCQP010000000
VERSION     DASCQP010000027.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2411)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2411)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2411
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000069675"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(228..1865)
                     /gene="pckA"
                     /locus_tag="QF480_00430"
     CDS             complement(228..1865)
                     /gene="pckA"
                     /locus_tag="QF480_00430"
                     /EC_number="4.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018358691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004612 - phosphoenolpyruvate
                     carboxykinase (ATP) activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (ATP)"
                     /protein_id="HJN05056.1"
                     /translation="MSRDLNKIKSDLASYGIVDAKEIIYNPSYEKLYEEEMNPDLEGY
                     EKGQLSESGAVNVMTGIFTGRSPKDKYIVKDDKTKDTVWWSEQAKSSDNKPVGQEEWK
                     HCYKLGADELSGKKLYVFDGFAGANEDTRMKVRFVMEVAWQAHFVTNMFIRPTEEELK
                     TFEPDFVILNAAKTTNPDWKTMKRLDGEPFNSEVFIVFNLAEGRAVIGGSWYGGEMKK
                     GIFSIMNYYLPLKGIAAMHCSANVGKDGDTAIFCGLSGTGKTTLSTDPKRALIGDDEH
                     GWDDDGIFNFEGGCYAKTINLDKESEPDIYKAIRRDALLENVSLDAEGKIDYTDGSVT
                     QNTRVSYPIYHIDNIVKPISKAGHAKKVIFLTADAFGVMPPVAKLTPEQTKYHFLSGF
                     TAKLAGTERGITEPKPTFSACFGAAFLTLHPTKYGQELIKRMEANGAEAYLVNTGWNG
                     TGKRISIKDTRGIIDAILDGSIEKSEMKNIPIFNLSVPTSLPGVDPGILDPRDTYADP
                     AEWDRKANELAALFIENFKQYTDNEEGKNLVAAGPEL"
     gene            complement(1988..>2411)
                     /locus_tag="QF480_00435"
     CDS             complement(1988..>2411)
                     /locus_tag="QF480_00435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006841864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="putative PEP-binding protein"
                     /protein_id="HJN05057.1"
                     /translation="MIEIPRAALIADQIAKSAEFFSFGTNDLTQMVFGYSRDDAGKFL
                     PIYIEKGIIKEDPFQVLDQEGVGQLVDIAVKKGRKTRKKIKLGICGEHGGDPSSIEFF
                     HRVGLQYVSCSPYRVPIARLAAAQSTIVNKRSWKRKNS"
BASE COUNT          695 a          480 c          401 g          835 t
ORIGIN      
        1 actaagtgta aatgagagtg tatagtgtgt acttatggac gcgaagaatt agtgtctgag
       61 ttgggttgga gtaattcctt tcttcattac ctcacttggc gcttatatag atttctgtaa
      121 aatatatatt acagattaag tacaaaattt attaaaaagc aaaagattac atataaaaaa
      181 atcccatttt cttggaaaat gggatttaat attaattcta attaggacta caattcaggt
      241 cctgctgcta caagattctt accttcttcg ttatccgtgt actgtttaaa gttttcgata
      301 aacaatgctg ccaattcatt tgcctttcta tcccattcag caggatcagc gtatgtatct
      361 cttggatcta atataccagg gtcaacacca ggtaatgaag ttggaactga cagattaaat
      421 atcggaatat ttttcatttc cgatttttct atggatccat ccagaattgc atcaataata
      481 ccgcgagtat ctttaattga gattctttta cctgtcccat tccatccagt atttacaaga
      541 taagcttccg caccgtttgc ttccattctt tttataagtt cttgtccgta ctttgttggg
      601 tgaagtgtta agaatgcggc accaaaacaa gcagagaatg taggtttagg ttcagtaatg
      661 ccacgctcgg tacctgccag ttttgcggta aatcctgaaa ggaaatgata tttagtttgt
      721 tcaggtgtta gttttgcaac aggaggcatt acaccaaaag catcagctgt aaggaaaata
      781 accttttttg catgtcccgc ttttgaaatc ggttttacaa tattatcaat atggtaaatt
      841 ggataagata cacgtgtgtt ctgtgtaact gatccatctg tataatcaat tttaccttca
      901 gcatctaagc taacattttc aagtagggca tcacgacgga ttgccttata aatgtccggc
      961 tcactttctt tatcaaggtt tattgtctta gcatagcatc caccttcaaa gttgaaaata
     1021 ccatcatcat cccaaccatg ttcgtcatca ccgataagtg ctcgttttgg atccgttgat
     1081 agagttgtct tgcccgttcc tgataatccg cagaaaattg ctgtatcacc atctttacca
     1141 acatttgctg aacaatgcat agctgcgatc cctttgagtg gcaggtaata gttcattatt
     1201 gagaagatac cttttttcat ttcaccacca taccagctgc caccaattac tgcacgtcct
     1261 tcagctaagt taaatactat aaatacctca gagttaaatg gttcgccatc cagacgtttc
     1321 attgttttcc aatcggggtt tgttgttttc gctgcgttta atataacaaa gtcaggttca
     1381 aaagttttta gttcttcttc tgttggacga ataaacatat ttgttacaaa atgcgcttgc
     1441 catgctactt ccatcacaaa acggactttc atacgtgtat cttcgtttgc acctgcaaaa
     1501 ccatcaaata cataaagttt tttgccggat agttcatcgg ctcctaattt gtaacaatgt
     1561 ttccactctt cctggcctac aggtttatta tcagagcttt tggcttgctc cgaccaccaa
     1621 actgtatctt tggtcttgtc gtctttaaca atatatttgt ctttagggga tctacctgta
     1681 aatattccgg tcattacgtt aacagcgcca gattcactca actggccctt ctcataacct
     1741 tcgagatcag gattcatttc ttcttcataa agtttctcgt atgaaggatt ataaataatt
     1801 tcttttgcgt caacaatacc gtagctggcg agatcagatt tgatcttatt taaatctctg
     1861 ctcatgataa ttttttttgg atttattaat tataaaaaac gtttgtaaaa ttacttaata
     1921 ataaggtatc taataaataa aagccactcg aatattcacg aatggcttaa tatagaatcg
     1981 ttaaaaatta actgttttta cgtttccagc tacgtttatt tacaattgtt gactgagctg
     2041 ctgcaagacg tgctattggt acacgatatg gtgaacaact tacatattgc aaacctaccc
     2101 ggtggaaaaa ttcaatcgaa cttggatcac ctccatgttc accacatata ccaagtttaa
     2161 ttttctttct tgttttacgt cctttcttaa cagctatatc tactaattgt cccacgcctt
     2221 cctgatcaag tacttgaaat ggatcttcct ttataatacc tttttcgata taaattggaa
     2281 gaaatttacc tgcatcgtca cgagaatatc caaataccat ttgtgttaag tcgttggttc
     2341 caaatgagaa gaattcagct gatttagcta tctggtcagc aattaatgca gccctgggaa
     2401 tctcaatcat t
//
LOCUS       DASCQP010000028         1951 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000070246, whole genome shotgun sequence.
ACCESSION   DASCQP010000028 DASCQP010000000
VERSION     DASCQP010000028.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1951)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1951)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1951
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000070246"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..446
                     /locus_tag="QF480_00440"
     CDS             <1..446
                     /locus_tag="QF480_00440"
                     /inference="COORDINATES: protein motif:HMM:NF015935.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="JAB domain-containing protein"
                     /protein_id="HJN05058.1"
                     /translation="AISIIAALEIGRRRRADDVIQKKKKIVSSKDVYDVFYADLSDKN
                     YEEFWILLVDRANQIIKRINISEGGISGTIADPKKIFKLALENNCSSIILAHNHPSNN
                     LQPSDNDIKLTKTISKAGLTLEINVLDHIIVGSDNYFSFADESMI"
     gene            524..1669
                     /gene="wecB"
                     /locus_tag="QF480_00445"
     CDS             524..1669
                     /gene="wecB"
                     /locus_tag="QF480_00445"
                     /EC_number="5.1.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013611236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008761 - UDP-N-acetylglucosamine
                     2-epimerase activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (non-hydrolyzing)"
                     /protein_id="HJN05059.1"
                     /translation="MIKIVTIIGARPQIIKAAALSRAIKNHYSDKITEIIVHTGQHYD
                     KNMSKVFIDELNIPEPNYNLNVGSASHAKQTSDMIIGIESVLNETNPDFLILYGDTNS
                     TLAGAIAASKIHIPIVHIEAGLRSFNKAMPEEINRIMCDHASTLLFSPTATGYNNLIK
                     EGFDPNSKTPYNADNPGIFHCGDVMYDNSLFFKSVALNNSTVMNDNNIEKDNFILCTI
                     HRDNNTDDPSRLNAIFGSLNRISNKDKITLVIPLHPRTRKLLDENLDAELFASINSNP
                     HIKILPPVSFLDMISFESNCKMVMTDSGGVQKEAYYFNKPCVILRSETEWVEIVEEGA
                     AIVANADEDKIIQSYNKLKNMNTRIFPLIFGDGKAAEFICKTLLRSA"
     gene            1840..>1951
                     /locus_tag="QF480_00450"
     CDS             1840..>1951
                     /locus_tag="QF480_00450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007133907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HJN05060.1"
                     /translation="MNQYETVFILTPVLSDDQMKESVKKYEDILSKKGVEI"
BASE COUNT          689 a          318 c          336 g          608 t
ORIGIN      
        1 aagcaatttc aataatagca gccctcgaaa ttggtaggag aagacgagct gatgatgtta
       61 tccaaaagaa gaaaaaaata gtatcaagca aagatgtgta cgatgtattt tatgctgacc
      121 tcagcgataa gaattatgag gaattttgga tattgctagt cgatcgcgcg aatcaaatca
      181 ttaagagaat taatattagc gaaggtggta tatcaggaac aatagctgat ccaaagaaaa
      241 tattcaagct tgccttggaa aataactgtt catcaataat acttgcccat aatcatccat
      301 caaacaattt acaaccaagt gataatgata ttaaattaac caaaacaatt tctaaagcag
      361 gacttacgtt agagataaat gttcttgatc atattattgt aggtagcgat aattatttta
      421 gtttcgctga cgaatcgatg atctagtgaa aagtgggtgg tgaaaggtga atagttaaaa
      481 tgattaatta tccaataacc aattacccaa tgtcaaacat attatgataa aaatagtaac
      541 tataatagga gctcgtcctc aaattattaa agcagctgct ttaagccgtg ctattaaaaa
      601 ccactactca gataaaatca ccgagataat agtccatacc gggcaacact atgacaaaaa
      661 tatgtcaaag gtttttattg acgaactcaa tatacccgaa cccaattaca atctaaatgt
      721 tggaagcgct agtcatgcca aacaaacttc tgatatgatt attggcatag agtcagttct
      781 taatgaaaca aatcccgatt ttttgattct ttatggagat actaactcta ctcttgctgg
      841 tgcgattgct gcttctaaaa ttcatatccc aatagtgcat attgaagcag gacttcgttc
      901 atttaacaaa gcaatgcctg aagaaataaa tcgtattatg tgcgatcatg cttcaacgct
      961 attattttca cctactgcaa ctggttataa taatctaata aaagaagggt tcgatcctaa
     1021 tagcaaaact ccttacaatg ccgataatcc gggtattttt cattgtggtg atgtaatgta
     1081 cgataacagc ctgttcttta agtctgtagc tctgaataac agcactgtaa tgaatgataa
     1141 taatattgaa aaagataatt ttattctttg tactattcat agggataata atacagatga
     1201 tccttcaagg ttgaacgcta tattcggttc attaaatcgt atttccaata aggataaaat
     1261 aacgctcgta attccgttac atccaagaac aagaaaatta ttggatgaaa atttagacgc
     1321 tgaattattt gcctcaatca actcaaaccc acatattaag atactgccac cggtgtcctt
     1381 ccttgatatg atttcgtttg agagtaattg caaaatggtt atgacagatt cgggaggtgt
     1441 tcaaaaggaa gcttactatt ttaacaaacc ctgtgttata ctacgatcgg aaacagagtg
     1501 ggtagaaatt gttgaggaag gagctgctat agttgccaat gctgatgaag ataaaataat
     1561 acaatcttat aataagctca agaatatgaa caccagaata ttcccgctga tttttggtga
     1621 tggaaaagct gctgaattta tatgtaaaac tctattaagg tccgcttaag aatctactca
     1681 tacaaatgtt cagtaactca atattataga ggccttaagc tatccatttc tacttttttg
     1741 atttttttac aatgcgttgt tgcatctaca aattatattt gtatttttgc gctcccattt
     1801 ttgggtaaat aaaattatct taaactaatt taaattatta tgaaccagta cgaaaccgtt
     1861 ttcattttaa ctcccgtttt gtctgatgac cagatgaagg aatcggtaaa aaagtatgag
     1921 gatatcctct ctaagaaagg tgttgaaata g
//
LOCUS       DASCQP010000029         3018 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000076553, whole genome shotgun sequence.
ACCESSION   DASCQP010000029 DASCQP010000000
VERSION     DASCQP010000029.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3018)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3018)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3018
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000076553"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1499
                     /locus_tag="QF480_00455"
     CDS             <1..1499
                     /locus_tag="QF480_00455"
                     /inference="COORDINATES: protein motif:HMM:NF013239.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycoside hydrolase family 31 protein"
                     /protein_id="HJN05061.1"
                     /translation="PEKMISDFKSKGVKTILITEPYILDSLENFKIADELGILALDSL
                     GDSYVNKEFYFGNGGLIDIFKPEASQWFWEQYKKQMNIGVAGWWGDLGEPENHPSDQI
                     HIVGMADEVHNIYGHYWHKMLFENYRKEYPNTRLFNLNRAGYAGSQRYSIYPWTGDVS
                     RSWGGLQAQLPLLIHMSLSGLPFIHSDAGGFAQGAKDEELYTRWLQMACFTPILRPHG
                     SGIPSEPVYFNDTTRKIVRNFMKLRYSLLPYIYTLTYEANQFGYPIVRPLFYEFPNDT
                     LSYSVENEYMFGDEMLVAPVIEREKKIKQIYLPFGSYWYDFWTNKKHDGNQWINVDVN
                     LETIPLFVKAGSFIPMTEPVNSTDDYSSEKLIVKYYCDSTTVVSSYTMFEDDGSTFGS
                     IEKNEFELLTIERKYIDENLTEYYFKSSGGEYEGQPPKRSIALILIGLSESINPSFNI
                     NNHQLEKKDQPHQLSAGYYYDHKLNIWTINFIWNGEEILIKQIISNDN"
     gene            1594..2970
                     /locus_tag="QF480_00460"
     CDS             1594..2970
                     /locus_tag="QF480_00460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009137962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HJN05062.1"
                     /translation="MKKIKNNLFVLTMLTMAIVIFISCDSTHKDSNNTEKESKHIDWS
                     KNANIYEVNIRQYTNEGTFKAFQKHLPRLKEMGVDILWLMPIFPVGELNRKGSLGSYY
                     AVKDYKEINPEFGNINDLKELVTEAHSLGMYVILDWVANHSAWDNPWATKHPEWYQHD
                     ENGNFVSPYDWTDVIAFDFNNPAIRDTMLDALKFWITEADVDGYRCDVAGLVPIDFWE
                     RARIELDSIKPVFMLAENEDVPNLLNEAFDMNYGWRLHHLMNEIAKGTKNANDIWDYL
                     AWNDSTYTSDSYRMYFTSNHDENSWNGTVKERLGNAIEAMAVLSYTIPGMGLIYSGQE
                     AGLDKRLLFFEKDTINWGDTKYEKMYTILNKLKRENKALWNGESGGKIVQLGDGSNQH
                     VFAFLREKDDDKIVTIINMSNEPQTFNIENDIVSGEFKNVFTGANVVIEEDMIVDLLP
                     WEYLILRN"
BASE COUNT         1041 a          456 c          591 g          930 t
ORIGIN      
        1 agcctgaaaa aatgatctct gattttaaga gtaaaggcgt aaaaacaata ttgattacgg
       61 agccatatat tcttgattca ttagaaaatt tcaagattgc ggatgaactg gggatacttg
      121 cattggatag cttaggagat tcatatgtaa ataaagaatt ttattttgga aatggtggtt
      181 tgatagatat ttttaaaccc gaagctagtc aatggttttg ggaacaatac aagaagcaaa
      241 tgaatattgg tgttgccggg tggtggggcg atctaggcga acctgaaaac catccctccg
      301 atcaaataca tattgttggt atggctgacg aagtacataa tatttacggt cattactggc
      361 acaaaatgct ttttgaaaat tacaggaaag agtatccaaa cacaagatta tttaacctta
      421 acagggccgg ttacgcaggt tctcaacgat attcaattta tccatggaca ggagatgttt
      481 caagaagttg gggaggttta caagcccagc tacccctctt gatacacatg agtttaagtg
      541 gtttgccatt tatccattca gatgcaggtg gttttgcaca gggagccaaa gacgaagaat
      601 tatacacacg ttggttgcag atggcatgtt ttactccaat actgcgacca catggttcgg
      661 gcataccttc tgaaccagta tattttaatg atactacacg caaaattgta agaaatttta
      721 tgaaacttcg ttatagcctt cttccatata tttatactct tacatatgaa gcaaatcaat
      781 ttgggtatcc aattgtaaga ccactgttct acgagtttcc aaacgacaca ttaagttata
      841 gtgttgaaaa tgaatacatg tttggagatg aaatgttagt tgctccggtt attgaaaggg
      901 agaaaaaaat taaacagata tatcttccgt ttggaagcta ctggtatgat ttctggacta
      961 ataaaaaaca cgatggtaac cagtggataa atgtggatgt aaatttggaa actataccgc
     1021 tatttgttaa ggctggctct tttatcccta tgacagagcc tgttaattca actgatgatt
     1081 attcatccga aaaacttatt gtgaaatatt actgtgattc aaccacggta gttagtagtt
     1141 atacaatgtt cgaagatgac ggcagtacat tcggatcgat tgaaaaaaat gaatttgaat
     1201 tactcacaat tgaaagaaag tatatcgatg aaaatttaac agaatattac tttaaaagtt
     1261 caggtggtga gtatgaaggc cagcctccaa aacgctcaat agcactaata ttaattggac
     1321 taagtgaatc cattaatcca tcattcaata taaacaatca tcaactcgaa aaaaaggatc
     1381 aacctcatca actctcagct ggctattact atgatcacaa acttaatata tggactatca
     1441 attttatatg gaatggggaa gaaatattaa ttaaacaaat aatctcaaat gataattaat
     1501 gaagtggata tataaccatg gagtatgaaa ttccgtagtc aaactaatat cctgtgaata
     1561 aatttataca actttgcagt taaatttata attatgaaaa aaataaaaaa taaccttttt
     1621 gttttaacca tgctaacaat ggcaatagtt atttttatat cctgtgattc aactcataaa
     1681 gatagcaata atacagagaa ggaatccaaa catattgatt ggagtaaaaa cgcaaatatt
     1741 tatgaagtaa atataaggca atacactaat gagggtacct ttaaggcttt tcagaagcac
     1801 ctacctcgct taaaagaaat gggtgtcgat atactctggc ttatgcctat atttccagtt
     1861 ggagaattga acagaaaagg ctcgcttgga agttactatg ctgtaaaaga ctataaagaa
     1921 ataaaccctg aatttggtaa tattaatgat ctgaaagagc ttgttactga ggcacatagt
     1981 cttggtatgt atgttatact tgattgggta gcgaatcatt cagcatggga caacccgtgg
     2041 gcaactaaac atccagaatg gtaccaacat gatgaaaacg gtaattttgt ttctccttat
     2101 gactggaccg atgttattgc ttttgatttt aataatccag caattcggga tacaatgtta
     2161 gatgccctca aattttggat tactgaagca gatgttgatg gttatcgctg cgatgtagcc
     2221 ggactggttc caatagactt ttgggaaaga gcacgtatcg aattggattc aataaaacct
     2281 gtttttatgt tagctgaaaa tgaggacgta cctaatttgc taaatgaagc tttcgatatg
     2341 aattatggtt ggagactaca tcatttaatg aacgagattg ccaaaggcac caaaaatgca
     2401 aacgacattt gggactactt ggcatggaat gattcaactt atacttcaga ctcttatcgc
     2461 atgtatttta cttctaatca tgacgaaaat tcttggaatg gtactgtgaa ggaacggttg
     2521 ggtaacgcca ttgaagctat ggcagtgcta tcgtatacaa ttccaggaat gggattaatt
     2581 tatagtggac aggaagcagg gcttgataaa cgtttgctct tttttgaaaa agatacaata
     2641 aactggggag ataccaagta tgaaaaaatg tatactattc tcaataaact taaaagagaa
     2701 aataaagcac tatggaatgg tgaatcaggt ggcaagattg ttcagcttgg tgatggatct
     2761 aaccaacatg tatttgcttt tcttcgcgag aaggatgatg ataaaattgt gacaatcatc
     2821 aatatgagta atgaaccaca aacatttaat atcgaaaacg atattgtttc cggtgaattt
     2881 aaaaatgttt ttacaggtgc gaatgttgtg attgaagaag acatgattgt tgatttgcta
     2941 ccttgggaat atttgattct taggaattaa tatttttgtt aaaaactaat ttcttcatag
     3001 tattattcgt acctttag
//
LOCUS       DASCQP010000030         3590 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000079863, whole genome shotgun sequence.
ACCESSION   DASCQP010000030 DASCQP010000000
VERSION     DASCQP010000030.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3590)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3590)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3590
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000079863"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..197)
                     /locus_tag="QF480_00465"
     CDS             complement(<1..197)
                     /locus_tag="QF480_00465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05063.1"
                     /translation="MRNNYKLLLIPVIFMFLGHSYLVAQQGIIRGFIYEEETGEPAIF
                     CNIVLAGTTYGASTDVNGYFI"
     gene            complement(398..1303)
                     /locus_tag="QF480_00470"
     CDS             complement(398..1303)
                     /locus_tag="QF480_00470"
                     /inference="COORDINATES: protein motif:HMM:NF039187.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5668 domain-containing protein"
                     /protein_id="HJN05064.1"
                     /translation="MKFRNIFWGIILILIGLLFTLDNLNLLDFDWYNLWRLWPVVLVL
                     WGISILPVKSIAKIVLVILVLAGSVFYMMNRTVQWHDNDFYISYNHDYDTRTVNQEFI
                     LPYEDSVAKANLNMEIAASTFMLIDDPIALINFEKRGSLIDYKYSVSQTDELVDVDIY
                     IEDDVVLRSHSNNRIAMSLNPQPVWDLQFDIGAADVEFDLSGLKINDLDVDGGAAAIM
                     IKLGDEYDDTKVNVETGASSIKVKVPEESGCDLNITSVLSGKTIRGFEKIDHGHYRTK
                     NFNEAENKIYLVIETAISSCSIIRY"
     gene            complement(1293..1787)
                     /locus_tag="QF480_00475"
     CDS             complement(1293..1787)
                     /locus_tag="QF480_00475"
                     /inference="COORDINATES: protein motif:HMM:NF015957.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PspC domain-containing protein"
                     /protein_id="HJN05065.1"
                     /translation="METTERLYRLTSNKVIGGVASGLADYFNIDVVLARVVFVLLAFF
                     GGGGVLIYIVMWIIIPAQNNGHNYTQNQNFNDGKKTDESSTDENNEGSNPGTTNRRHL
                     KSSNTGLIAGIVLIFLGMLFLVDRLMPWYNVTDFWPLLLVAVGVLIIKPDIFKPTKKQ
                     SNEI"
     gene            complement(1925..2824)
                     /locus_tag="QF480_00480"
     CDS             complement(1925..2824)
                     /locus_tag="QF480_00480"
                     /inference="COORDINATES: protein motif:HMM:TIGR01352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015291 - secondary active transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB family protein"
                     /protein_id="HJN05066.1"
                     /translation="MKIDKDRRRGMIGTIMIHALLLIFLLVVALRTPLPLPGEEGVEV
                     NLGFDEQGIGNIQSEAPPPKSEPIPVQEKIVQPPADPEPVEEEIITQDIEEAPVIEEE
                     IKEEKPEKEPEKEIIEEKKPDPIPDDKVEEKPIEEIIDSIFIEEEPIEEVPIEEPKPI
                     VNKRALYTGSSSDTKGTNQGITAGAGDQGKPHGYKESDDYSGLGGSGNGISFSLGGRG
                     SLFLEKPTATFREQGTVVVSIWVDQDGNVKKAHVSAKGTNILDQNLRKIAVDAAYNST
                     FVKDNNAAELQRGTITYNFILMK"
     gene            complement(2828..3241)
                     /locus_tag="QF480_00485"
     CDS             complement(2828..3241)
                     /locus_tag="QF480_00485"
                     /inference="COORDINATES: protein motif:HMM:NF014525.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HJN05067.1"
                     /translation="MAIQMRNKRDTNFSMASMSDMVFLLLIFFMLTSTLVAPNAIKLL
                     LPNSNSKTMSKQTVTVYINKARNIYVEDRKVDRVNLENVLYGLIRNEQAASVVLRSDK
                     TASVQDIVVVIDAVNEINNNHNTTHKVILATKPKR"
     gene            complement(3249..>3590)
                     /locus_tag="QF480_00490"
     CDS             complement(3249..>3590)
                     /locus_tag="QF480_00490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005658130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HJN05068.1"
                     /translation="AIENTGKLEVSRLERNVAGLATIAGAAPMLGFLGTVIGMIRAFY
                     DMSMAGNNINIELLSRGIYQAMITTVGGLVVGITAYIFYNILVARIQSVVYKLEINAT
                     EFMDMLHEPAK"
BASE COUNT         1099 a          704 c          555 g         1232 t
ORIGIN      
        1 attataaaat aaccattaac atctgttgat gctccgtaag tagttcctgc caaaacaata
       61 ttgcaaaata tagccggttc tccagtttcc tcttcataaa taaatcctct gattatacct
      121 tgttgggcaa ccaaatagct atgccctaaa aacatgaaaa tcacgggaat aagaaggagt
      181 ttgtaattat ttctcataca tgaaagtttc tattgttttt gaaacgtcca aagtaactaa
      241 aaagtgtgtt acaaatgcaa tttatttaag gaagaaataa aataaataat gtcaaacact
      301 tcaataaaaa gtctattaaa cacaaaagcc ctgccgtaag caaggctatt gaagaaattt
      361 atgttgatca gacagaaact gtcctacaat agggttctta ataacgaatt attgagcaac
      421 tcgaaatagc tgtttcaata actagataga tcttattttc agcttcatta aaattcttag
      481 ttctatagtg accatgatca atcttttcaa atccgcgaat tgtttttcct gataaaacag
      541 aagtaatatt taaatcgcag ccagattctt ctggtacctt tacctttatt gaggaggctc
      601 ctgtttctac attaactttt gtgtcatcat attcgtcacc taacttaatc ataatggcag
      661 cagcaccacc atcaacatca aggtcattga ttttaagtcc tgataagtca aattctacat
      721 cggctgctcc aatatcaaac tgtagatccc agaccggttg tggatttaat gacattgcta
      781 ttctattgtt agaatgcgat cttaatacaa catcatcttc tatataaata tcgacatcca
      841 ctaattcatc tgtttgtgaa actgaatatt tatagtcaat taatgatcct ctcttttcga
      901 agttaataag ggcaatcgga tcgtcaatta acataaatgt actagctgct atttccatat
      961 tcaaatttgc ttttgctacg ctatcctcat atggtaaaat aaactcctga tttactgtcc
     1021 tggtgtcata atcatgattg taacttatgt aaaaatcatt gtcgtgccat tgaacagttc
     1081 tattcatcat gtagaaaacc gatcctgcta acactaaaat taccaatact atttttgcaa
     1141 tgctttttac aggcaatata gaaattcccc ataaaacaag tactacaggc cacaagcgcc
     1201 ataggttata ccagtcgaaa tcaagtaaat tcaagttatc aagtgtaaat agcaacccga
     1261 taagtatcag gattatgccc caaaaaatgt ttctaaattt cattgctttg ctttttagta
     1321 ggtttaaaaa tatccggttt aataattaga acgccaacag ctactaataa aagtggccaa
     1381 aaatcagtga cgttatacca tggcattaat ctatcaacta agaatagcat gcctagaaaa
     1441 attaagacga ttcctgctat gagcccagtg ttagaggatt ttaaatgtct cctattagta
     1501 gttccgggat ttgagccttc attgttttca tctgtactac tttcatctgt ttttttgcca
     1561 tcgttaaagt tttgattttg tgtatagtta tgaccgttat tttgtgccgg aattattatc
     1621 cacatcacaa tataaatcaa tacaccacct ccaccaaaaa atgccagtag aacaaaaaca
     1681 acacgagcaa gtacaacatc aatattaaag taatcagcta atccgctggc tacaccacca
     1741 ataactttgt tggaagttaa tcgatatagt ctttctgtag tttccattat ttttgatttt
     1801 ttattagttg attttttaaa ttctttggca aatatatctt gttacccaag ggtagcaaac
     1861 aacaattcgg tgaaaggagg tattttttcg gtggttgggg aagttatggt actatgtaag
     1921 ggttctactt catcaaaata aagttgtacg taattgtacc acgttgaagt tcagcggcat
     1981 tgttatcttt tacaaatgta gaattatagg cagcatcaac agcgatcttt ctgagatttt
     2041 gatcaaggat gttagtacct tttgcactta cgtgagcttt ttttacattt ccatcctggt
     2101 caacccaaat actaacaact actgttcctt gctctctgaa tgttgctgtt ggtttttcaa
     2161 ggaaaaggct gcctctgcca ccaagactaa aggaaatccc atttccagag ccacctaacc
     2221 cgctataatc atcactctct ttatatccat gaggttttcc ctgatcgcca gctcctgctg
     2281 taatcccttg attcgttccc tttgtgtcag atgaacttcc ggtataaagt gctctcttat
     2341 ttacgatagg tttcggttct tcaataggaa cttcttcaat gggttcttcc tcaataaata
     2401 tagagtcaat tatttcttca attggttttt cttcaacttt atcatcgggg attgggtctg
     2461 gtttcttttc ttcaataatt tctttctctg gttctttttc aggtttctct tcctttattt
     2521 cttcttcaat aaccggagct tcttctatgt cctgagtaat aatttcttcc tctacaggtt
     2581 ctgggtcagc aggaggttga acaatttttt cctgaactgg gatgggttct gactttggag
     2641 gtggagcttc actctgaata tttcctattc cttgttcatc aaatcccaaa ttaacttcaa
     2701 caccctcctc tccaggtaaa ggtaaaggtg ttcgtaaagc cacaactaat aaaaagatga
     2761 gcaataatgc atgtatcatt attgtcccta tcattcccct tcttctgtcc ttatcaattt
     2821 tcattagtta cctttttggc tttgtggcca gaataacctt atgtgttgta ttatggttat
     2881 tatttatttc attaacggca tcaattacta ctacaatatc ctgaacagag gctgttttgt
     2941 ctgaacgcaa tacaacagaa gctgcctgct catttctaat aagtccgtat agtacatttt
     3001 caagatttac tcgatcaact ttacgatctt caacatatat atttctagct ttatttatgt
     3061 aaacagtaac tgtttgcttc gacattgttt tactattact atttggcaac aacaatttta
     3121 ttgcatttgg tgcaaccaat gtagatgtaa gcataaagaa tatcaataac aaaaatacca
     3181 tgtcagacat agaagccatg ctgaaattag tatcgcgttt atttcgcatt tgtatagcca
     3241 tagcttatct atttagccgg ttcgtgaagc atatccataa attcagtagc attaatttct
     3301 aatttataaa ctaccgattg tattctggca accagtatat tatagaaaat atatgcagta
     3361 attccaacca caagtccgcc aactgtagtt atcatagcct gatatatgcc acgtgacagc
     3421 aattcgatgt taatgttatt tcctgccatc gacatatcgt aaaatgccct gatcattcca
     3481 ataacagttc ctaaaaaacc aagcattggg gcagctccgg caatagtagc aagtccggca
     3541 acatttcttt caagtcttga gacttccagt ttaccggtat tttcaatagc
//
LOCUS       DASCQP010000031         2723 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000081449, whole genome shotgun sequence.
ACCESSION   DASCQP010000031 DASCQP010000000
VERSION     DASCQP010000031.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2723)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2723)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2723
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000081449"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1816)
                     /locus_tag="QF480_00495"
     CDS             complement(<1..1816)
                     /locus_tag="QF480_00495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05069.1"
                     /translation="MPKYITLFFAFILLNVSCIYGQQVDSLSINSEEFFSQISAILQN
                     TPSKNYQKKSDVLMSRFYERWSIGRFNKDEKAEVRDLIEKMRLKKMRTYPYLYDYIYA
                     LTLLSESNQIPRSIISWHAYAEKLLNEKKSTHFSKFLDFTIDLLEKERFHRKNNLSWY
                     QRNSRFSFFLDTNFLVIFKKGDLVCATKKDSSVIVDTKGTFNYELKRWDGKSGKLRWS
                     RFGEEKAKEIFADIDNYTIDVNLPSYKIDSATLHYKRFFTHPIIGTLTERIASSPPSE
                     RTSFPRFDAYFDQFELYNIYPEVSFFGGAQLEGLKLFGIGGVTSKAIVKLTKSDSLYA
                     MVRAEKFRLSADGFISSNAEFVFYFDKDSLYHPSLRVKYTNDKRQFVMYNDYIGSSMT
                     PFFDSYHELDIYVQALFWKMNETSLVFKRIRNIRNRNIAEFVSSNYFSQKDFYRMEGI
                     DDINPFYIIENYIKTYDENEIKLNALASFMEKPADQVSALLIDLSNKGFLVYDSRKKR
                     AIVKDRFKYFMKAKNGLIDYDVIRLTSNVDGKPNATINLNTLDLEVNGVPEVSISDSQ
                     EVYIYPYDKTFFFKKNMDFTFDGQVHMGLLYFYSRNSTF"
     gene            complement(1878..2519)
                     /gene="prmA"
                     /locus_tag="QF480_00500"
     CDS             complement(1878..2519)
                     /gene="prmA"
                     /locus_tag="QF480_00500"
                     /inference="COORDINATES: protein motif:HMM:NF018076.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008276 - protein methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006479 - protein methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HJN05070.1"
                     /translation="MSIEVMPDKNWNEVWESNYPSVTIDNRCYVRASFHDSKPTIDYE
                     IVIQPKMAFGTAHHETTAMMIQLILENDFANKKVLDMGCGTGVLAILASMKGAETVTA
                     IDIDQWSYENTLENVKLNNITNVNVIKGGAEVVVDVDNLEIILANINKNILLQDMKYY
                     ANPLLEGGYIYFSGFYSNDLSDIEAEASNYGLRLINNLENNNWAAAVFKKLKS"
     gene            complement(2523..>2723)
                     /locus_tag="QF480_00505"
     CDS             complement(2523..>2723)
                     /locus_tag="QF480_00505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05071.1"
                     /translation="TMNYIQTKVPIPENYVDTEILIAKLMSFGFDSFEEQTHSLIAYI
                     PECEFVKDYLLSIDHYRECEKL"
BASE COUNT          896 a          514 c          386 g          927 t
ORIGIN      
        1 cgaaggtgct atttcttgaa taaaaataca ataagcccat atgaacttgt ccgtcaaatg
       61 taaaatccat atttttctta aaaaaaaacg ttttgtcata gggataaata tatacttctt
      121 gcgaatcgct gatgcttacc tctggaaccc cattaacttc caaatcaaga gtattcagat
      181 ttattgtagc attaggtttg ccgtcaacat ttgatgtgag cctaattaca tcataatcaa
      241 taaggccgtt ttttgccttc ataaaatatt taaacctatc ctttacaata gctcttttct
      301 ttcttgaatc ataaaccaga aaacctttgt tcgacaaatc gattagcaaa gcactaacct
      361 gatcagcagg cttttccata aacgaggcga gtgcatttag ttttatttca ttttcgtcgt
      421 aagtctttat atagttttcg ataatataaa atgggttaat atcatcaatt ccttccatcc
      481 tataaaaatc tttttgtgaa aagtaattgc tcgacacgaa ttctgcgata tttctattac
      541 gtatatttct gatccgtttg aaaaccaaag aagtctcgtt cattttccaa aataatgctt
      601 gaacatatat atcgagttca tgataagaat caaaaaatgg agtcattgaa gaaccgatat
      661 aatcattata cattacaaac tgacgtttgt cgtttgtgta ttttactctt aaagatgggt
      721 gatataatga atccttatca aaataaaata caaattcagc atttgaagaa ataaacccat
      781 cggcactgag acggaatttc tctgccctta ccattgcata caaactatcg ctttttgtaa
      841 gctttacaat tgctttggat gtaacaccac caatcccaaa caatttaagt ccctcaagtt
      901 gagcaccccc aaaaaaactt acttcaggat aaatattgta cagttcaaat tgatcaaaat
      961 atgcgtcaaa acgtgggaaa gatgttcttt cgcttggagg acttgatgct attctttctg
     1021 tgagcgtgcc aataattggg tgtgtaaaaa accttttgta atgtaatgta gcagaatcaa
     1081 tcttatacga aggaaggtta acatcaatag tataattatc aatatcagca aatatttctt
     1141 ttgctttttc ttcaccaaac cgggaccatc tcaacttgcc cgatttccca tcccatcttt
     1201 ttagttcata attaaaagta ccttttgtat caactataac agaactatcc ttttttgttg
     1261 cacatacaag atcacccttt ttaaatatta ccaggaaatt tgtgtcgaga aagaaactga
     1321 aacgagaatt acgttgatac catgataagt tgttcttacg atggaatctt tccttttcca
     1381 gcaaatctat tgtaaagtcc aaaaatttgg aaaaatgagt gcttttcttc tcattcaaaa
     1441 gcttttcagc atatgcatgc catgaaataa tgcttctcgg aatttggttt gattcggaaa
     1501 gaagtgttag tgcataaatg tagtcgtata aatatggata tgtgcgcatc ttttttaagc
     1561 gcatcttttc aataagatcc ctcacctctg ctttttcatc cttattaaac cggccaatac
     1621 tccaccgttc ataaaacctg gacattagaa catctgattt tttctgataa tttttagatg
     1681 gtgtattttg taatattgct gaaatctgag aaaagaactc ctcagaattt atagataatg
     1741 aatctacttg ttgaccatag atacaagata cattcagtag tatgaaagca aaaaataatg
     1801 ttatgtattt tggcatcatg tttgggttcc agttgtatcg agttgttata tcagcctgac
     1861 atccatactc tcaactatta actctttaac tttttaaaaa cagcagctgc ccagttatta
     1921 ttttctaagt tattaataag tctaagtcca taattacttg cctcagcttc aatatctgat
     1981 aaatcattgg aataaaaacc gctaaaataa atatatccac cttcaagtaa cggattagca
     2041 taatatttca tatcctgcaa caaaatattt ttattgatat tagccaggat aatctcaaga
     2101 ttatcaacat caacaacgac ttcagcacca ccctttatca catttacatt ggttatgtta
     2161 ttcaacttga cattttctaa agtattttcg tacgaccatt ggtcaatatc aattgcagta
     2221 acggtttcag cacctttcat agatgccaga attgcaagaa cacctgtacc acaacccata
     2281 tccagcactt tcttattggc aaaatcattt tctaaaatta actgaatcat catcgcagtt
     2341 gtttcatgat gtgctgtacc aaatgccatt tttggctgaa taacaatttc ataatcaata
     2401 gttggtttac tatcatgaaa agatgcccga acataacacc tattatcaat tgtaacagaa
     2461 ggataattgc tttcccaaac ttcattccag tttttatcag gcattacttc gatactcaac
     2521 tttcataatt tttcacactc acgataatga tcaatactca aaagataatc ctttacaaac
     2581 tcgcattcag gaatatacgc tattaagcta tgcgtttgct cctcaaaact atcaaagcca
     2641 aacgacatta gcttagctat tagaatttca gtatcaacgt aattttcagg tattggaact
     2701 tttgtttgga tgtaattcat ggt
//
LOCUS       DASCQP010000032         5044 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000081867, whole genome shotgun sequence.
ACCESSION   DASCQP010000032 DASCQP010000000
VERSION     DASCQP010000032.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 5044)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5044)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5044
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000081867"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..692
                     /locus_tag="QF480_00510"
     CDS             <1..692
                     /locus_tag="QF480_00510"
                     /inference="COORDINATES: protein motif:HMM:NF020130.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ketoacyl-ACP synthase III"
                     /protein_id="HJN05072.1"
                     /translation="FDYNQSCTGYIYGLSMADSIISAGNAKNILLITSEAITSTIHPK
                     DSSNRAIFGDAATASIITKNKDNSRFGKFIFGTDGSKYDRIIIKHGRERFPLPKYSEE
                     DKIDSYGNIRNNANFYMDGSEVFNFSVTKAPELVSQLLDDNGLKFNDIDFFVFHQANQ
                     IILETIGKKLKVPDNKLIIDIETTGNTVSSTIPIALKNSIDQGKIKRGSILLIAGFGV
                     GFSWGGTILKF"
     gene            complement(682..1560)
                     /locus_tag="QF480_00515"
     CDS             complement(682..1560)
                     /locus_tag="QF480_00515"
                     /inference="COORDINATES: protein motif:HMM:NF013232.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside phosphorylase"
                     /protein_id="HJN05073.1"
                     /translation="MTSIKETDLVLNGDGSIYHLNLFPGDVAETVLLVGDPGRVNLVA
                     SFFETIELEKQNREVNTVTGTYKGKRLSVMSTGMGPDNIEIVVNELDALFNIDLMLKI
                     EKSEKTVLNLIRIGTSGALQSDIHVVNSYIVSEYGLGFDGLAYFYEIGVDIIDHELTS
                     NFIKQLEWDSNLPTPYAVRGSEYLLKKVGYGWRKGITLTAPGFYAPQGRELRLKVQDN
                     TLIERARHFKHNGLEVTNFEMETSALYALSAMLGHNALTVCDIIANRISDDFNTDSKK
                     SMQELIEEILKRLVKI"
     gene            1689..2927
                     /locus_tag="QF480_00520"
     CDS             1689..2927
                     /locus_tag="QF480_00520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013444692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence/damage-inducible protein A"
                     /protein_id="HJN05074.1"
                     /translation="MKEIKAEIISIGDELLIGQVVNTNASWIASELVKNGIEVGRITA
                     IKDSKSEIFEALNSSIENIVLFTGGLGPTKDDITKGVLCNYFDSKLIFHTPTFDHIKS
                     LFGKRNYPVTEVNKNQALIPDKCIPLFNQYGTAPGMWFETDAKVVVSMPGVPFEMKSL
                     VTNELIPRLKQRFQAKNIIHRTIMTIGVGESMLAEKIADWENDLPNHIKLAYLPQPGI
                     VRLRLSTQSNNYDSSFSEIESQISKLQNIIPDKIFGFDDSSLEEVVGNLLAEKGRTLS
                     TAESCTGGYIAHLITSIAGSSNYFTGSVVSYANDVKVKQLNVEPSDIETYGAVSKEVV
                     EQMAIGGRKLLNTDYCLATSGIAGPDGGTEDKPVGSVWIALASPMEVKSRLFQFGEHR
                     GRNIHRSALAALNMLRKELS"
     gene            complement(2988..3875)
                     /gene="fabD"
                     /locus_tag="QF480_00525"
     CDS             complement(2988..3875)
                     /gene="fabD"
                     /locus_tag="QF480_00525"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010799941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004314 - [acyl-carrier-protein]
                     S-malonyltransferase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HJN05075.1"
                     /translation="MNAYVFPGQGAQYVGMGKDLFDNSPKAKELFNKANSILKFDITD
                     LMFLGTEDDLKQTNVTQPAIFIHSVILARILGDDFKPDMVAGHSLGEFSALVANGTIL
                     FEDGLKLVAKRADAMQKACEIEPSTMAAIIGLDDGVVERICESIDDIVVPANYNSPGQ
                     LVISGSVGGINEAIKRCNDAGARRALLLKVGGAFHSPLMEPARLELADAINSVKFNNG
                     VCPIYQNVTGQSVNDGEIIKKNLVAQLTAPVRWTKIMQNMIADGANNIIEVGPGKVLQ
                     SLFKKIDRQIQTRSATFGN"
     gene            complement(3909..4634)
                     /locus_tag="QF480_00530"
     CDS             complement(3909..4634)
                     /locus_tag="QF480_00530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007557722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HJN05076.1"
                     /translation="MNLTNNQINYAGREESIPVAKTFLSGVFMWMGLALSITALVSWL
                     FASNASLMNILFDPNTGSMNMVGWIVLLAPLGLVLWMSFGFQKLSASTLVLIFIAYSI
                     LMGMSLSFIFLIYTLPSIAKTFVITAAMFGFMGILGYTTKTDLTKFGSIMMMGLVGLI
                     IASVVNMFMQSATMEYVISFIGVLVFTGLTAYDVQKLKRIGNSISIDSEAARKLTIMG
                     ALTLYLDFINLFLFLLRFFGSRK"
     gene            complement(4751..>5044)
                     /locus_tag="QF480_00535"
     CDS             complement(4751..>5044)
                     /locus_tag="QF480_00535"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018338255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I"
                     /protein_id="HJN05077.1"
                     /translation="YIPNGYITGCSKIARDVEVYSRSLQVQKRLTTQIKDTIHNTLNP
                     LGVAVVIEARHLCMAMRGVQKQHSVTTTSDFTGAFERAGTRAEFISLVSSTLS"
BASE COUNT         1664 a          932 c          853 g         1595 t
ORIGIN      
        1 cttttgacta taatcaaagc tgtacgggat atatttatgg attaagtatg gccgacagca
       61 ttatttccgc tggtaatgca aaaaatatat tattgataac atccgaggct attaccagca
      121 ctattcatcc aaaagatagc agtaacagag caatatttgg tgatgcggca actgcttcaa
      181 taattactaa gaacaaggat aacagtagat ttggaaagtt tatttttgga accgacggca
      241 gcaaatacga cagaataatt attaaacacg gacgcgaacg atttccgctt cctaaatatt
      301 ccgaagaaga caaaatagat agctatggca atattagaaa taatgctaat ttctatatgg
      361 atggctctga agtctttaat ttttcagtta ctaaagcacc tgaacttgtt tcccaactgc
      421 ttgatgacaa cggtttaaag tttaatgata ttgacttctt tgtattccat caggcaaacc
      481 aaatcattct tgagaccatt ggaaaaaaat tgaaagttcc tgacaataaa ctaattattg
      541 atattgaaac caccggtaat acagtttcat caacaattcc tatcgcatta aaaaattcta
      601 tcgatcaggg aaaaattaag cgtggtagta tattactaat tgctggtttt ggagttggct
      661 tttcctgggg cggaactatt ctcaaatttt aacaagtctt tttaaaatct cttctataag
      721 ctcttgcata ctttttttag aatcagtgtt aaaatcgtca ctaattctgt tggctataat
      781 atcgcataca gttagtgcat tatgtcctag cattgcagaa agtgcatata gagcagaagt
      841 ttccatttca aagtttgtta cttccaatcc gttatgttta aaatgccggg ccctttcaat
      901 caaagtattg tcctgtacct taagtcttaa ttcacgtcct tgtggtgcat aaaatccagg
      961 tgcggttaaa gttatccctt tacgccatcc atatccaact tttttaagaa gatattcaga
     1021 acctcttact gcatatggcg ttggaagatt actgtcccat tcaagttgct taataaaatt
     1081 tgatgtaagt tcatggtcaa taatatcaac accaatttca taaaaatagg caagaccgtc
     1141 aaaaccaagt ccatattccg atacgatgta tgagttaaca acatgaatat cagattgtaa
     1201 agcaccagat gttccgattc taataaggtt caatacagtt ttttcgcttt tctcaatctt
     1261 caacatcaga tcaatattaa aaagtgcatc aagttcatta acaacaattt caatattatc
     1321 aggtcccatc cctgttgaca ttactgatag tctttttccc ttgtaggttc cggttactgt
     1381 gttaacctct ctattttgct tctctaattc tattgtctca aaaaaactag caactaagtt
     1441 aactctccca ggatcaccaa caagcaaaac tgtttcagct acatctccag ggaaaaggtt
     1501 taaatggtaa atagatccat ccccattcag tactaaatcc gtttctttaa tagaggtcat
     1561 atattttctg taaaaagaat aagtaatttt gcaaatataa tatttagcca aataatagca
     1621 ttatcacaaa aagcttagtt gtaagacccg aaaattgatt ttaatgaata gccaattttt
     1681 aaacttaaat gaaagaaatt aaagcagaga taattagtat tggtgatgag ttacttatcg
     1741 gccaggttgt aaatacaaac gcatcctgga tagcatccga attagttaag aacggaattg
     1801 aagtaggcag gataactgca attaaggatt caaaaagcga gatatttgaa gctcttaact
     1861 cgtcaataga aaatatcgtt ctatttactg gtggattggg tccaacaaaa gacgatatca
     1921 caaaaggtgt tctttgcaat tattttgatt ccaagctaat atttcatact ccaactttcg
     1981 atcatattaa gtctcttttt ggtaaaagaa actatcctgt aacagaagta aataaaaatc
     2041 aagctctaat tcctgataag tgcattcccc ttttcaatca atatggtact gcacctggaa
     2101 tgtggttcga aactgatgct aaagttgtgg tatcaatgcc aggagttcct ttcgaaatga
     2161 agtcattggt tactaacgaa ttaattccaa gattaaaaca aagatttcaa gctaaaaata
     2221 ttattcatcg tactataatg acgattggag tgggtgaatc catgcttgct gagaagatcg
     2281 cggattggga aaatgatcta ccaaaccaca tcaaacttgc atacctacca caacctggaa
     2341 ttgttagatt aaggctttct acccaaagta ataattatga tagttcattc tctgagatag
     2401 aaagtcagat tagtaaactt caaaatataa ttcctgataa aatttttgga tttgatgata
     2461 gtagtctgga agaagttgtt ggaaatctat tagctgaaaa aggcagaact ctttcaacgg
     2521 ctgaaagttg tactggagga tatattgctc atttgataac tagtatcgct ggaagttcaa
     2581 attacttcac aggttctgtt gtttcttatg caaatgatgt aaaggtcaag caactcaatg
     2641 ttgaaccatc tgacattgaa acatatgggg ctgtaagcaa ggaagttgta gagcagatgg
     2701 ctattggagg aagaaagctg ctcaacaccg attattgttt ggcaacatca ggtatcgctg
     2761 gaccagatgg tggaactgaa gacaaacctg taggatcggt ttggatagcg ttagcatctc
     2821 cgatggaagt taaatcaaga ctatttcaat ttggagaaca tcgtgggaga aatatacata
     2881 gatcagcact tgctgcatta aacatgttaa gaaaagagct ttcttagata tgtggctcta
     2941 caaaaaaagt attaacaagt acctcatcga ctagttatca catgcaacta attgccaaat
     3001 gtagcacttc gggtttgtat ttgtctgtca atctttttaa aaagactctg tagaacttta
     3061 cctggtccaa cttcaataat attattggca ccatcagcta tcatattctg cattatttta
     3121 gtccagcgta caggtgctgt taattgtgca acaagattct tctttatgat ctcaccatca
     3181 ttaactgact ggcctgttac gttttgataa atgggacaaa ctccattatt aaatttaact
     3241 gagttgatag catccgccaa ctccaacctg gcaggttcca ttagaggtga atgaaaagct
     3301 ccgccaactt ttagtaacaa tgctcttctt gcgccagcat cattacatct tttaatggct
     3361 tcattaatac ctccaactga tccggaaatc actaactgac caggactatt gtagtttgct
     3421 ggtacaacaa tatcgtcaat actttcacaa atgcgttcaa caacaccatc atctaaacca
     3481 attatggcag ccatagtaga tggttcgatt tcacatgcct tttgcattgc gtcggctcgt
     3541 tttgcaacaa gctttaaccc atcttcaaat aatattgttc cgtttgctac aagtgcagaa
     3601 aactcaccaa gtgagtggcc tgcaaccata tcaggtttaa agtcatctcc caatatccgg
     3661 gcaagaatta ccgaatgaat aaaaatagca ggttgtgtta catttgtttg ctttaggtca
     3721 tcctccgttc caagaaacat caaatcagta atatcaaatt ttaatatact gtttgctttg
     3781 ttaaataatt ccttggcttt tggggagtta tcaaataaat ccttacccat acctacatat
     3841 tgtgctccct gcccgggaaa aacatatgcg ttcatatatt tataattatt tggttaatag
     3901 ttcattactt atttcctgct tccaaaaaag cgcaacaaaa atagaaataa attgataaag
     3961 tctaaataaa gtgttaaagc tcccattatt gtcaacttac gggctgcttc agaatcaatg
     4021 gatatgctat taccgattct tttgagtttt tgcacatcat atgcggttaa tcctgtaaac
     4081 acaagaactc cgataaagct tattacatat tccatagtgg cactctgcat gaacatattt
     4141 acaacagatg caattataag tccaacaagt cccatcatca taatgcttcc aaatttggtt
     4201 aaatcagttt tagttgtata tcctaatata cccataaacc caaacatagc ggcagttata
     4261 acgaatgttt tcgctataga aggcaatgtg tatattaaaa agataaaact cagactcatt
     4321 cccatcaata ttgagtatgc tataaaaatc agaacaagtg ttgaagcact gagcttttga
     4381 aacccaaatg acatccaaag tactaggcct aaaggagcaa gaagtactat ccacccaacc
     4441 atattcatgc taccggtgtt agggtcgaaa agtatattca tcaatgatgc gttagatgca
     4501 aaaagccatg aaactaatgc tgtgattgac aaggccagcc ccatccacat aaatacacct
     4561 gaaagaaaag ttttagcaac agggatggat tcttccctgc ctgcataatt tatttgatta
     4621 tttgttaagt tcatttataa agttttctaa tctaacgatt acgttttatc aatattttat
     4681 caatgcaaaa ttaactagtg taatcgttgt tttgataatt ttaacaattt ttatataaga
     4741 gaaatccgaa ttatgaaaga gtcgacgaaa caaggctaat aaattcggcc ctggttccag
     4801 ccctttcaaa ggctcctgta aagtcagacg ttgttgttac tgagtgttgt ttctgtactc
     4861 cacgcatcgc catacacaaa tgtcttgcct ctattacaac agcaacacca agagggttta
     4921 atgtattgtg aattgtgtct tttatttgtg ttgtgagtcg tttctgcact tgcagacttc
     4981 ttgaataaac ctcaacatcc cgggcaattt tactacatcc tgttatatat ccgttaggaa
     5041 tata
//
LOCUS       DASCQP010000033         1599 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000085971, whole genome shotgun sequence.
ACCESSION   DASCQP010000033 DASCQP010000000
VERSION     DASCQP010000033.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1599)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1599)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1599
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000085971"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..287
                     /locus_tag="QF480_00540"
     CDS             <1..287
                     /locus_tag="QF480_00540"
                     /inference="COORDINATES: protein motif:HMM:NF019135.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="two-component regulator propeller
                     domain-containing protein"
                     /protein_id="HJN05078.1"
                     /translation="IWFSGQEGLYQLTSDRLKLVYKPKKDWSVTSIYESSIGEIWVGT
                     DKNGIFVIVGSENKHYTVDDGLGSNQIKEIFEDKQKNIWVVTKNGISKYD"
     gene            complement(306..1229)
                     /locus_tag="QF480_00545"
     CDS             complement(306..1229)
                     /locus_tag="QF480_00545"
                     /inference="COORDINATES: protein motif:HMM:NF012376.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HJN05079.1"
                     /translation="MRLQKLLFFIFSITVFLYSCSEYSKKEKVVYNPSTLKELHDGFF
                     DAEITPEIIETNNSEITIIVTGHIYPLLNYPHIYNTLIDSIMSQNPDYIFLLGDLVRD
                     NVDKEWDSIFMRFNKIDSKLFFAPGNHDLNYHYERWEGSREHQFEAEMNYVNEIGYRY
                     KLLKDNFANYVFINPNDSLDRVLTYLDIIKPELDTSKLLILLSGQSLWHNKHQKKDDN
                     RTWVSKAFTRDEILPEVEYFDYLIHGDWGGSFYQGFWKKSTGRFNVIGTGNRKPGDSL
                     FVTKMIISENGIKAGPVKIEIPPESKWFRNK"
BASE COUNT          540 a          254 c          259 g          546 t
ORIGIN      
        1 caatttggtt ttcaggacag gagggacttt atcaactaac ttccgataga ctaaaattgg
       61 tgtacaaacc caaaaaagat tggagtgtaa catcaatata tgaaagttcc attggagaga
      121 tttgggttgg taccgataaa aacggaattt ttgtgatagt tggttctgaa aacaaacatt
      181 atactgttga cgatggactt ggtagtaacc aaataaagga aatttttgag gataagcaaa
      241 agaatatttg ggttgtgaca aaaaatggaa tcagcaagta tgattagttg ctaataagtt
      301 aatggttact tatttctaaa ccatttgctt tctggaggta tctctatttt aacaggtccg
      361 gctttaattc cattttctga gataatcatc ttcgtaacaa ataatgagtc tccaggtttc
      421 ctgttacctg tgcctattac attaaatctt cctgtacttt tcttccaaaa cccctgatag
      481 aaactgcctc cccaatctcc atgtatcaaa taatcaaaat attcaacttc aggcagaatt
      541 tcatcacgag taaaggcttt actaacccaa gttctgttat catctttttt ttgatgcttg
      601 ttatgccata gagattggcc acttagtaat atcaatagtt ttgacgtatc cagctctggc
      661 ttaattatat ctaaatatgt cagtactcta tctaaagaat cgttagggtt aataaacaca
      721 taatttgcaa aattgtcctt caataattta tatctgtaac caatttcatt tacataattc
      781 atttcagctt cgaactgatg ctcacgactc ccttcccatc tttcataatg ataattcaaa
      841 tcatggttgc caggggcaaa aaataacttg ctatctatct tgttaaatct cataaaaata
      901 gaatcccatt ctttatcaac attatcacgc actaaatcac cgagtagaaa tatataatcc
      961 ggattctgac tcattatact gtcaatcaga gtgttataaa tatgtggata attgagtaaa
     1021 ggatagatgt gtcctgtaac aataatcgta atttccgaat tgttagtttc aataatttca
     1081 ggagtaattt cagcatcaaa aaacccatca tgcaattctt taagtgtaga agggttatag
     1141 actacttttt ctttttttga atattctgag caagagtaaa ggaaaacagt aattgagaaa
     1201 ataaaaaaca gtaatttttg taaacgcatg ataaatgaat tatagctatc gattatgcaa
     1261 tttaaagtta tgcaaagata gaaaaaggag tttaggagaa ttagtggaaa tttggtacaa
     1321 ggaaacaggg gtaaagggat atcggagcaa agtagatagt ggaataaagt tcattttcaa
     1381 ccataatttc acttttttgg gagtgttcaa aaaagtgtgt cattcttaat tttgtatggc
     1441 aaagcccttt cgcctatggc tacagaactt tgccatacaa aattaatgtt ttataagaat
     1501 ctttcatatc tatcttcaaa tttatcaatt aattctcttt ggattgataa ccagttaaat
     1561 gcttttcttt tccaactttt ttcattgtgc attaaagct
//
LOCUS       DASCQP010000034         2598 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000095087, whole genome shotgun sequence.
ACCESSION   DASCQP010000034 DASCQP010000000
VERSION     DASCQP010000034.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2598)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2598)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2598
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000095087"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2598)
                     /gene="sprA"
                     /locus_tag="QF480_00550"
     CDS             complement(<1..>2598)
                     /gene="sprA"
                     /locus_tag="QF480_00550"
                     /inference="COORDINATES: protein motif:HMM:TIGR04189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cell surface protein SprA"
                     /protein_id="HJN05080.1"
                     /translation="HVDHEISKEFHIGGTLLNLHERPLTQKVNYGDDPISNTMWGIDM
                     SYRTESRWLTKMIDKLPGISTKEISQINVDGEFAQFIPGHSKAIGKSGTSYIDDFEGA
                     SSSIDLKNISMWFMASTPQGQPNMFPEAQLIDTSFSNLYAYGKNRAKLAWYIIDPLFY
                     DIRGGFRPSNVDKNEISKNDVRQVLQREVFPNKDNYLNNIPTNIAVLNLAYYPDEKGS
                     YNFDVESNPYSDGINEEGDLVNPESRWGGIMREIETSDFEASNIEYIEFWMMDPFTED
                     QNNKGNLYINLGEISEDILKDGRKSYENGLPTSSFVENVDTTIWGRIPSLQALVESFS
                     SAGGSREFQDVGYDGLRSTDQDDDEQSFYKSTYLDVIRSEYGAQSNAFKNAEIDPSTD
                     DYHYFRGGDYDSEARYSSVTERYKKFNNSEGNSPTDAQNPEAYPTAATNYPNVEDINR
                     DNTLSESERYFQYKVELDPTKMEVGKNFITDVFEAKDIKLANGDITSVHWYQFKIPVQ
                     NPDDIIGNISDFRSIRFMRLFMRDFEREVVVRFATFELVRGEWRRYDHPLLEPGDYST
                     GDYGNETNFTVATVNIEENGSREPIPYVIPPGIERESNFGTTSYVLQNEQSVEMKVSE
                     LFDGDARGIFKTTDFDFRQYKRLKMFVHAEKMLENEELYYGDMTAFIRIGSDFTHNYY
                     EYEVPLEFTKWGTVASAPDSIWPEINNFDIDLQELVHIKQNRNIALRDPNSGLRLDQP
                     YVEYIGNNKVTILGSPSISDVKGILIGVRNPKQRIGFDDDGSPRSAIIWVDELRLTDF
                     NDHPGWAATGRVEADLADLGRVVVSGSHSSAGFASLEKKISQIPLEYVTNFMVATDIE
                     LGKFFGEKAG"
BASE COUNT          782 a          560 c          396 g          860 t
ORIGIN      
        1 cctgctttct caccaaaaaa tttacctaat tctatatctg tagcaaccat gaagttcgtt
       61 acatattcca gtgggatttg actaattttc ttttcaaggc ttgcaaaccc agctgaacta
      121 tgagaacccg aaacaacaac tctacctagg tctgccaggt cagcctcaac cctaccggta
      181 gcagcccagc ctggatgatc gttaaaatct gtaagtcgca attcatccac ccaaattatt
      241 gcacttcttg gactaccatc atcatcaaat ccaatgcgtt gttttgggtt acgaacacca
      301 ataagtattc cttttacatc gcttatgctc gggctaccta aaatagtcac tttgttatta
      361 ccaatgtatt caacatatgg ttgatccaaa cgaagtcccg agttaggatc tcgtaatgca
      421 atatttcgat tctgctttat atgaacgagt tcctgcagat caatatcaaa attattaatt
      481 tcaggccata ttgagtcagg agcagaggca accgttcccc atttggtaaa ttcgagggga
      541 acctcatatt cataataatt atgggtaaaa tcagatccaa tccttatgaa ggctgtcata
      601 tccccataat atagttcttc attttctaac attttctcag catgtacaaa catttttaac
      661 cgtttgtatt gtctgaaatc aaaatccgtg gttttaaaaa ttccccttgc gtcaccatca
      721 aataactcac ttactttcat ctcaactgac tgctcatttt ggagtacata acttgtggtt
      781 ccaaaatttg attcgcgctc aataccaggt ggaattacat aaggtatagg ttctctactt
      841 ccattttctt caatatttac agtggcgaca gtaaaatttg tttcgttacc ataatcgcct
      901 gttgaataat ctccaggttc tagcaaagga tggtcatatc tcctccactc acctcttaca
      961 agttcaaaag tggcaaaacg aacaactact tctcgctcaa aatcacgcat gaacaatctc
     1021 ataaacctaa ttgatctgaa atcactgata tttcctatta tatcatccgg gttttgaacc
     1081 ggaattttaa attgatacca atgtacactt gtaatatcac catttgcaag tttaatatcc
     1141 ttagcttcaa aaacatcagt tataaaattc tttccaactt ccatttttgt tggatcaagc
     1201 tcaactttat actgaaagta tctttcagat tcacttaggg tattatcacg gttaatatct
     1261 tcaacatttg gataatttgt tgctgctgtc gggtaagctt caggattttg tgcatcagta
     1321 ggtgaattgc cttcagaatt attgaatttc ttataacgtt ctgtcacact tgaatatcta
     1381 gcttcgctat cgtaatcacc acccctgaaa taatgatagt catctgtgga tgggtctatt
     1441 tcagcatttt tgaaagcatt tgactgggca ccatactctg acctgataac atcaagatag
     1501 gtagatttgt aaaatgattg ctcatcatca tcttggtctg tactcctaag accatcatat
     1561 ccaacatcct gaaattcccg agaaccacct gcactgctaa atgactcaac caacgcctgt
     1621 agagatggta tacgccccca aatagtagtg tcaacatttt caacgaagga agatgtaggc
     1681 aatccatttt cgtaactttt tctaccatct tttagaatat cctcagaaat ttctccaagg
     1741 ttgatatata ggttaccttt attattttgg tcttcagtga aaggatccat catccaaaat
     1801 tcgatgtatt caatattcga agcctcgaag tctgatgttt caatttcacg cattatacca
     1861 ccccatcgtg attccggatt aacaagatct ccttcctcgt taattccatc tgaatatgga
     1921 tttgactcaa catcgaaatt atacgatcct ttttcatcag gataataagc cagatttaat
     1981 acagcaatat tagtaggaat attatttaaa taattatctt tattaggaaa cacttccctc
     2041 tgcaacactt gtctcacatc atttttagat atctcattct tatcaacatt ggaaggtctg
     2101 aatccacctc gtatatcata aaacagtgga tcgataatat accaggctaa tttggcccta
     2161 ttttttccat atgcgtataa attagaaaat gaagtatcaa ttaattgggc ttcaggaaac
     2221 atgttgggtt gtccttgcgg tgtactagcc ataaaccaca tacttatatt tttcaaatca
     2281 attgatgacg acgccccttc aaaatcatca atgtaagagg ttccactttt tcctattgct
     2341 tttgaatgtc caggaataaa ctgtgcaaat tctccatcaa cattaatttg tgagatttct
     2401 ttagttgata tacccggcaa cttatcaatc atcttggtta gccatcgaga ttcagtacga
     2461 taactcatat caatacccca catcgtattc gaaataggat catcaccgta gtttactttt
     2521 tgagtaagcg gacgttcatg aagattaagc aatgtacccc cgatatgaaa ttctttgctt
     2581 atctcatggt caacatgt
//
LOCUS       DASCQP010000035         4522 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000096210, whole genome shotgun sequence.
ACCESSION   DASCQP010000035 DASCQP010000000
VERSION     DASCQP010000035.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4522)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4522)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4522
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000096210"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..292
                     /locus_tag="QF480_00555"
     CDS             <1..292
                     /locus_tag="QF480_00555"
                     /inference="COORDINATES: protein motif:HMM:NF014344.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="arginine deiminase family protein"
                     /protein_id="HJN05081.1"
                     /translation="VIKEGLAVACMDGFKEGIPRILKDWEFIEASPEECHAMGSNTLC
                     LEPGKVFMGSQYKRLINEIEKKGCEPIPVDYDAVEWNGGGIRCTTHPLVRKN"
     gene            complement(720..790)
                     /locus_tag="QF480_00560"
     tRNA            complement(720..790)
                     /locus_tag="QF480_00560"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(756..758),aa:Cys,seq:gca)
     gene            complement(1072..1422)
                     /gene="folB"
                     /locus_tag="QF480_00565"
     CDS             complement(1072..1422)
                     /gene="folB"
                     /locus_tag="QF480_00565"
                     /EC_number="4.1.2.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009137306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004150 - dihydroneopterin aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006760 - folic acid-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HJN05082.1"
                     /translation="MSVISIEGMEFFAYHGCFKEEQLIGTKFIIDLLLSVDTSKAEVS
                     DSLQDTVNYQEVFQVVKNEMKVTSKLLEHVGGRILKSVKENFPQIEKATLKIRKMNPP
                     LGGKMDFVSITLDY"
     gene            complement(1448..2974)
                     /gene="gltX"
                     /locus_tag="QF480_00570"
     CDS             complement(1448..2974)
                     /gene="gltX"
                     /locus_tag="QF480_00570"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018337921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009332 - glutamate-tRNA ligase complex
                     [Evidence IEA];
                     GO_function: GO:0004818 - glutamate-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HJN05083.1"
                     /translation="MSNSKIRVRFAPSPTGPLHIGGVRTALYNYLFAKKKGGKLILRI
                     EDTDQNRFVPGAEQYIIDSLSWCGIEFDEGVTTGGEYGPYKQSERKQIYRQYAEMLIS
                     SKHAYYAFDTADELNKIRSEYESQKLTFTYNATERKKLNNSLTLSQEDTDQIIANKEP
                     FVIRFKMPENKTVIMNDLIRGRVEVNTSELDDKVLFKSDGMPTYHLANIVDDHLMKIS
                     HVIRGEEWLPSLPLHVLLYEAFSWEKPEFAHLPLLLKPDGNGKLSKRDGDRLGFPVFP
                     LQWTDPKTGDISSGFREEGYFPEAMVNILAMLGWNPGDEREIFSMRELTEVFSLDRVG
                     KSGARFNPVKAIWYNHQYLIKKDNNELAELLMPITINNGVLVEKEQLGEAIALVKNRV
                     NFVEELWNQLDFFFKRPQEYDQKAVNKRWKPDSYNQMEELKNVLSEIEDFTAENTERI
                     VKLWIEEKEYGMGLIMNALRLLIVGALKGPHLFDIVALIGQEETLERIDQGLHEIGRK
                     "
     gene            3334..>4522
                     /locus_tag="QF480_00575"
     CDS             3334..>4522
                     /locus_tag="QF480_00575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HJN05084.1"
                     /translation="MTAKQIPLEDFFKNPEKTSYRISPDGNYYSYMAPYENRMNVFVQ
                     EKGSDEVIQLTAETDRSVSNYFWPNSERILYLKDTGGDENFKLYGINIDSTNPIAYTE
                     FDGVRTQIIDDLPDIPNEVIIGLNKRNPQVFDPYRLNLETGEMEILAENPGNIQGWMF
                     DHDGKLRVAFAIVDGINVSLLYRETEADEWKSVLTTSFKDNISPEFFTFDNKNVIATS
                     NLNRDKSAVVEFDIANGKEVKVLYENPDYDVSSVSYSRKRKVMTSANYTSSKRENHFF
                     DKEVEDLYKRLEKDLGDYEIAITGLNDNEDVFIIRTYSDRSLGSYYIYDKTTDKLDKI
                     VEVSPWIDEDNMANVYPVKYKSRDGLTIHAYLTLPLGYTPETAKDLPTIINPHGGPWA
                     RDGW"
BASE COUNT         1391 a          808 c          782 g         1541 t
ORIGIN      
        1 tgtaataaag gaaggtcttg cggtggcctg catggacggt tttaaagaag ggattccccg
       61 aattctcaaa gattgggaat ttatagaagc ttcaccagaa gagtgtcacg ctatgggtag
      121 taatacttta tgtcttgaac caggaaaagt ctttatgggt tctcaatata aacgcctgat
      181 taatgaaata gaaaaaaaag gatgtgaacc aatacctgtt gattatgatg ctgtcgaatg
      241 gaacggggga ggtattcgat gtacaaccca tcctcttgta agaaaaaatt aaagtaaaca
      301 ttatcattcc aataacagca ggtagaaaca tctcaatcaa atatcacata ctgaaatctt
      361 tagaagagga acgttctctt gctataattc attttgacgc caaatacact tttactgatt
      421 aacaatttag aaggtaaatt tgcagatata aaacttaaaa attttcaata ttttataaag
      481 aaccaatcgt tttatgaaac attggatttc tatatataaa tacaatatgt gtttatataa
      541 acggttaaaa tcgtttatta aattgcatat taggggaagt ctatgatggt acttatggat
      601 cgttactaat cttacgagtt acatgatcct catccgggag gttttaggtt gctgttaatg
      661 tgaactaaat tgaaacagaa aatatattgt tttctatttt gttggttcct tttattttga
      721 ggtaccggac ggattcgaac cgccgtgaat ggttttgcag accaccgcct agccactcgg
      781 ccacggtacc aaggctaaaa attggattgc aatattactt cttttttgag agatggatga
      841 tattatttta caaaatggtt aattaatatt acttgttcat ataactgtgg ttaacttttc
      901 tctgcaaaac tctggagaca caccggacac aagcatgagt tgtacttctt ttcaatttca
      961 tcaagtactg taggggatac tttgacttca aagcaccagc attttccaga cttactacac
     1021 tgaaacggga ttccgcattt tgggcatttt tcgtcttcag tcaatttcat gctagtaatc
     1081 taatgtaatg cttacaaaat ccattttccc gcctaatggc ggattcattt ttcgtatttt
     1141 aagagtggct ttttcaattt gtggaaaatt ttcttttacg gatttaagta tcctaccacc
     1201 aacatgttca agtaattttg acgttacctt catctcattt ttaacaactt gaaaaacttc
     1261 ctgataattt acagtatcct gtaggctgtc agatacttca gctttagagg tatcaacaga
     1321 taacaataag tcgataataa attttgtgcc aattaattgc tcttctttaa agcagccatg
     1381 ataggcaaaa aattccattc cttcaattga aatcacagac atgttctaac ttatatttaa
     1441 taaagtatta tttccttcca atttcatgca atccctggtc aattctctct agggtttctt
     1501 cttgtccaat aagggcaact atatcaaaaa gatgaggacc ttttaatgct ccgactatta
     1561 gtagtcttaa agcattcatt atcaatccca ttccatattc cttttcttct atccacaact
     1621 taacaattct ttcagtattt tctgctgtaa aatcctcgat ctctgaaagt acatttttca
     1681 attcctccat ttggttatat gagtcgggtt tccatctttt attaacagcc ttctggtcat
     1741 attcttgtgg tcttttgaaa aagaaatcaa gttggttcca taattcctca acaaaattga
     1801 ccctgttttt aactaaagca atagcttcgc caagttgttc cttttcaact agtacaccat
     1861 tattaatagt gattggcatt agtaattctg ctagttcatt attatctttt tttataagat
     1921 attggtgatt ataccatata gcctttacgg gattaaatct tgctccagat tttccaaccc
     1981 tgtccagtga gaaaacttct gttagctctc tcattgaaaa tatttctctt tcatcaccgg
     2041 gattccatcc taacatggcc aatatattaa ccatagcctc tggaaaatat ccttcttccc
     2101 tgaagccaga tgaaatatcg ccggtttttg ggtctgtcca ttgtagaggg aagacgggaa
     2161 atcctaaacg gtcaccatca cgcttgctta gttttccatt tccatcaggt tttagtagaa
     2221 gtggtaaatg tgcaaattcg ggtttttccc aactaaacgc ttcgtaaagt aatacatgta
     2281 gtgggagaga gggaagccat tcttcaccac gaattacatg gctgattttc atcagatggt
     2341 catctacaat gtttgccaga tgatatgttg gcattccgtc tgatttaaaa agaaccttat
     2401 cgtcaagctc cgaagtatta acctctaccc tgccgcgtat taaatcgttc attattacgg
     2461 ttttgttttc aggcatttta aaccggataa caaatggttc cttgtttgcg ataatctggt
     2521 ctgtatcttc ttggctcagg gttagggagt tgttcagctt ttttctttcg gttgcattgt
     2581 atgtaaatgt aagcttttgt gattcgtatt cagagcgtat tttgtttaac tcatcggccg
     2641 tatcaaaagc ataataagca tgtttactgc taatgagcat ctccgcatat tggcgataaa
     2701 tttgctttct ctccgactgc ttataaggcc catactcacc tcctgtggtt acaccttcat
     2761 cgaattctat tccacaccag ctaagtgaat caattatata ctgctcagct cccggcacaa
     2821 atctgttttg atcagtatcc tcaatgcgaa gtattaattt tcctcccttc ttctttgcaa
     2881 ataaataatt gtacaaagct gttcttactc ctcctatatg tagcggacca gttgggcttg
     2941 gtgcaaacct tactcttatt ttgctgttac tcattataat aaatttatcg ggcagcaaat
     3001 atagttaagt tgaaagttta atgttatgtc tttacttaaa aagttttttc tacaattttt
     3061 tgtgttcgtg tacgttttgc tattttttaa cgcttaatta caagccattt tttactcaat
     3121 aaaataaagg cactatatat aatttttgtc aaaaatgatc aggttttcgt ttaaaagacc
     3181 aaaattgtat agatttgccg tcagaatcgc aaaatcattt cttattagtc atacctaaaa
     3241 catattatca tgaacattag aaattcaatt attattacaa tagtcagtat atttttgctg
     3301 gcctcatgtt gtaaccacgc agataaaaat caaatgaccg ctaaacaaat tccattagaa
     3361 gattttttta agaatcccga aaaaaccagt tacagaattt cacctgacgg gaattactac
     3421 tcttatatgg ctccttacga aaaccgaatg aatgtttttg tacaggaaaa gggtagtgat
     3481 gaggtaattc agttaacagc cgaaaccgat agaagtgttt ctaattattt ctggccaaac
     3541 agtgaacgaa tcctttacct aaaagataca ggaggcgatg aaaacttcaa actttatggt
     3601 attaatattg atagtaccaa tcctattgca tacactgaat ttgatggtgt gcgcactcaa
     3661 attattgatg atttacctga tattccaaat gaggtaataa ttggattaaa caagcgtaat
     3721 cctcaggttt ttgatcctta tcgcctaaat cttgaaactg gcgaaatgga gatacttgca
     3781 gaaaatcctg gaaatattca gggttggatg tttgatcatg atggcaaatt aagggttgct
     3841 tttgcaatcg ttgatggcat aaatgttagc ttgttatatc gtgaaacaga agccgatgaa
     3901 tggaaaagtg tacttaccac cagttttaaa gataatatta gccctgagtt tttcactttt
     3961 gacaacaaaa atgttattgc aacatcaaat ttaaatcgcg acaagagtgc tgtagttgaa
     4021 tttgatattg ctaatggtaa agaagtgaaa gttctatacg aaaatccaga ttatgatgtc
     4081 tctagcgtta gctattcaag gaaaagaaag gtgatgacct cggcaaatta tacttcgtcc
     4141 aaaagagaaa accacttttt tgacaaagaa gtagaagatc tttataagcg tcttgaaaaa
     4201 gatttgggag attatgaaat tgctattacc ggtcttaatg ataacgaaga tgtttttatt
     4261 ataagaacat atagcgaccg ttctctggga tcatattata tttacgataa aacaactgac
     4321 aaacttgata aaattgttga agttagtcct tggattgatg aagataatat ggcaaatgtt
     4381 tatcccgtga agtataaatc acgtgatggc cttactatac atgcttatct cactttacct
     4441 ttggggtata cgccagaaac tgcaaaagat ctccctacga ttatcaaccc tcatggtgga
     4501 ccatgggctc gtgatgggtg gg
//
LOCUS       DASCQP010000036         2038 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000099251, whole genome shotgun sequence.
ACCESSION   DASCQP010000036 DASCQP010000000
VERSION     DASCQP010000036.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2038)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2038)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2038
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000099251"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..542
                     /locus_tag="QF480_00580"
     CDS             <1..542
                     /locus_tag="QF480_00580"
                     /EC_number="3.6.1.55"
                     /inference="COORDINATES: protein motif:HMM:NF012514.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005777 - peroxisome [Evidence IEA];
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003986 - acetyl-CoA hydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0008413 - 8-oxo-7,8-dihydroguanosine
                     triphosphate pyrophosphatase activity [Evidence IEA];
                     GO_function: GO:0010945 - CoA pyrophosphatase activity
                     [Evidence IEA];
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_function: GO:0035539 - 8-oxo-7,8-dihydrodeoxyguanosine
                     triphosphate pyrophosphatase activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0009132 - nucleoside diphosphate metabolic
                     process [Evidence IEA];
                     GO_process: GO:0015938 - coenzyme A catabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CoA pyrophosphatase"
                     /protein_id="HJN05085.1"
                     /translation="LILSPVLGKSPAPKTSSIYFNPDSVVISSPTTGSLMIVRAADKR
                     VHGGQVSFPGGMVEEIDDSLIHTALREANEEIGIIPESVKIIGLLTKLYIPPSNFDVY
                     PIVSYTDSTPIFKSNYEVQEVLEIDLETLLNPETRTHKKIQHRNGNEFEVPCYYIQGE
                     VIWGASAMIMSEMLEVVNG"
     gene            complement(873..1175)
                     /locus_tag="QF480_00585"
     CDS             complement(873..1175)
                     /locus_tag="QF480_00585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013618754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HJN05086.1"
                     /translation="MSISHNYFVYIMTNKNKTVLYTGVTNDIERRVYEHETNEFKGFT
                     KRYNCHYLVYYEHTTSIEEAIDREKEIKKWRREKKDRLIALFNPQWLFLNDQIENI"
     gene            complement(1385..1705)
                     /locus_tag="QF480_00590"
     CDS             complement(1385..1705)
                     /locus_tag="QF480_00590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008762031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3467 domain-containing protein"
                     /protein_id="HJN05087.1"
                     /translation="MDENKSKPQNKINIDLTEEVADGIYSNLAIITHSHAEFIVDFVK
                     MMPGIPKAKVKSRIILTPEHAKRLTKALTENIRKYEAMHGPIKESKDGGLPPFSFGAP
                     TAQA"
BASE COUNT          578 a          349 c          421 g          690 t
ORIGIN      
        1 ctttgatttt atctccagtt ttggggaaat caccagcacc taaaacatca tcaatatatt
       61 tcaatccgga ttcagtagtt atttcttctc ccactaccgg ttcactaatg attgtacgag
      121 cagctgataa aagggtgcac ggtggacaag tttcttttcc tggtgggatg gtagaggaga
      181 ttgatgattc attaatacat actgcattaa gagaagcgaa tgaagagata ggaattattc
      241 ctgaatctgt taaaattata ggtctactga ctaaacttta tattcctcca agtaattttg
      301 atgtttaccc aatcgtgagc tatactgact ccactcctat ctttaaatcc aattatgaag
      361 tccaagaagt acttgagatt gatttggaaa cacttttaaa tccagaaaca cgaactcata
      421 agaaaataca acatcgaaat gggaatgagt ttgaagttcc ttgttattat attcaggggg
      481 aagttatttg gggggctagt gctatgatta tgtcggagat gttggaagtg gtgaatggtt
      541 agtggttaat agtgaataga cggatttaaa gaacatactg tcatcccgaa tgcagcgaag
      601 cgaagaggga tccgttgaat gcggagtccg attcttggga tacctgcctg ccggcaggca
      661 ggtctcgtcg ctctgcttcc ctcgatatga caacttatga ttttaaaggg accagaataa
      721 cgtactgtca tcccgaatgc agcgaagcga agagggatcc gttgaaagcg gagtccaatt
      781 cttgggatac ctgcctgccg gcaggcaggt ctcgtcgctt tgcttccctc gatatgacag
      841 gtgcttgttt tgggatttat tgttgaacac ttttaaatat tctctatttg atcattaaga
      901 aatagccact ggggattaaa taaggctatt aatctgtcct tcttttctct cctccatttc
      961 tttatctcct tttcgcgatc aattgcttct tcaatactgg tagtatgttc ataatataca
     1021 agatagtgac aattgtatct ttttgtaaat cctttgaatt cattggtttc atgctcataa
     1081 actcttctct caatatcatt tgtaactcca gtatataata cagtcttatt cttgttagtc
     1141 ataatataaa cgaaatagtt gtgtgagata gacatattgc aaaaacagta aagaataaga
     1201 tcattttttt ataactaccg gacgtgaagt attgcaaata tgcttctaat aaaggatttc
     1261 tcgtcgtaca aaaattgctt aatgcaatat gtgtacttcc ctcgaaatga caagtagttt
     1321 gaaaaaaagt aaattatcag attgaactaa ttcaacattt aaaattcaac attcataatt
     1381 ccctctacgc ttgtgctgta ggtgctccga atgaaaatgg tggcagcccg ccatcttttg
     1441 attctttaat tgggccatgc attgcttcat acttacggat attctcagtt agggcttttg
     1501 taagtcgctt tgcatgttcg ggtgtgagga taatacgtga ttttactttt gcctttggaa
     1561 ttccaggcat catctttaca aaatccacaa taaactctgc atgagaatgg gtgatgatag
     1621 caaggtttga atagattcca tcggctactt cttctgtgag gtcgatgttt attttgtttt
     1681 ggggtttgct tttattttcg tccatggtct tttatttttg ataaagtatt gtttattcag
     1741 cacgcgatcc cgatagctat cgggacgtgc gctagttggt gtagcagtca gtattgttga
     1801 attacttaac cgatacaaaa gtaaagttaa tttagttagc atgaaaaaag attgttgaat
     1861 attagtagtt tggagattct tcgcgttgct actactacta atgacaaaga tgagcaggca
     1921 ggcttcgata tgagaagtgg ttcattttta ttttgttggc atgtgttatg ttagcacgcg
     1981 ctagttgggg agttgttatt aaaggatctc tgatggctat ttcaataaat cgtccgaa
//
LOCUS       DASCQP010000037         1649 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000106216, whole genome shotgun sequence.
ACCESSION   DASCQP010000037 DASCQP010000000
VERSION     DASCQP010000037.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1649)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1649)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1649
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000106216"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..518)
                     /locus_tag="QF480_00595"
     CDS             complement(<1..518)
                     /locus_tag="QF480_00595"
                     /inference="COORDINATES: protein motif:HMM:NF012509.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05088.1"
                     /translation="MITEKGPVFNSKILLFGEYSLMKGSMALCIPYAKFTGQLLIDNS
                     SEGRSKHPSVVYLSEYLDFLEKNNFDQIINTQEFRLDIERGLYFNLNIPISYGLGSSG
                     AIVAAIYNSYFLQESSNTLSELKTIFSRMESYYHGKSSGLDPLVSYLNKAVLLAENNK
                     LKTIELSKESNK"
     gene            complement(515..>1649)
                     /gene="mvaD"
                     /locus_tag="QF480_00600"
     CDS             complement(515..>1649)
                     /gene="mvaD"
                     /locus_tag="QF480_00600"
                     /EC_number="4.1.1.33"
                     /inference="COORDINATES: protein motif:HMM:TIGR01240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004163 - diphosphomevalonate
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0019287 - isopentenyl diphosphate
                     biosynthetic process, mevalonate pathway [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="diphosphomevalonate decarboxylase"
                     /protein_id="HJN05089.1"
                     /translation="RLQTIFLSLQKILLTEDLVNYLNSKLNFKEVPSGKVGWRSPSNI
                     ALLKYWGKKAVQLPSNASLSFTLQESLTETVVKFFPTSGKNFNLKFYLDGIHNDIFAE
                     KISTFFKALVDIFPFINQLGFKIHSKNTFPHSVGIASSASGMSAIALTLCEIERKYFN
                     TFSSNDEFFQKASYIARLGSGSACRSLYGGLVSWGEIEGIESSSNLYGSKLILNIKPV
                     FETYQDSILIVDSTQKKVSSRFGHELMNSNPLSNKRFEQANNNIQRLLSVISSGDLVE
                     FVKIVESEALTLHAMMMTSNPYFILMKPNTISIINSIWEFREETEIPVCFSLDAGPNI
                     HLLYPHENKDQVIAFINSELLKFTNNNTVIHDKVGSGPEKLEL"
BASE COUNT          533 a          281 c          267 g          568 t
ORIGIN      
        1 tttttattac tttctttgga cagttctatg gttttcagtt tgttattttc tgctaaaagc
       61 actgctttgt taagataaga aacaagggga tctaaacctg aactttttcc gtggtaatac
      121 gactccattc tggagaagat tgttttcaat tctgataaag tattactgct ttcttgtaga
      181 aaatacgaat tataaatcgc agctacaatt gctcctgaac tcccaagtcc atagcttatg
      241 ggtatattga ggttgaaata aagacctctt tctatatcta atctaaattc ctgagtatta
      301 attatttgat cgaaattatt tttttcaaga aaatccaggt attcagataa gtaaactact
      361 gaagggtgct tactccggcc ttctgatgaa ttgtcgatta gcaattgacc agtgaattta
      421 gcatacggaa tgcagagggc cattgagcct ttcataaggc tgtattctcc gaaaagtaaa
      481 attttggaat taaatacagg tcctttttct gttatcataa ctctaacttt tcaggcccac
      541 tgcccacttt gtcgtgaatg actgtattat tgttagtaaa tttaagaagt tcagaattaa
      601 taaatgctat cacttggtct ttgttctcat gaggataaag caggtgaatg ttaggtcctg
      661 catctaaact aaaacaaacc ggaatctctg tttcttctct aaattcccat atactattaa
      721 ttatcgaaat agtatttggt ttcattaaaa taaaatacgg gttggatgtc atcatcatag
      781 catgcaaagt aagagcttcc gattcaacta tttttacaaa ttctaccaaa tcacctgaac
      841 taataaccga cagtaatctt tgtatattat tgtttgcctg ttcgaacctt ttatttgata
      901 agggattaga attcataagc tcatgcccaa atctgcttga cactttcttt tgtgtagaat
      961 caacaataag gatcgaatct tggtaagttt caaaaacggg tttaatattt aatattaatt
     1021 tacttccata caagttagaa ctactttcaa ttccttcaat ttcaccccag cttaccaatc
     1081 ctccatatag agaacggcat gcactacccg aaccaagtct tgctatatat gacgcttttt
     1141 gaaaaaattc atcatttgaa gaaaaagtat taaaatattt tctttcaatc tcgcataaag
     1201 taagagcaat tgcactcatt cctgatgcag aagaggcaat gccaactgaa tgaggaaaag
     1261 tatttttcga atggatttta aaacctaact gattgataaa gggaaaaata tcaactaagg
     1321 ccttaaaaaa agttgatatt ttttcagcaa atatgtcgtt atgtattcca tcaagataaa
     1381 acttaagatt aaaattcttt cccgaggttg gaaaaaattt gacaacagtt tcggtaagtg
     1441 attcttgtag agtaaaactc agtgatgcat tactcggtaa ctgaactgcc tttttccccc
     1501 agtatttaag gagcgcaata tttgaagggc ttcgccatcc aacctttcct gaaggaactt
     1561 ctttaaagtt gagtttagaa tttaaatagt tcactaaatc ttctgttagt agaatttttt
     1621 gtaaagatag aaatatcgtt tgtaatctg
//
LOCUS       DASCQP010000038         5012 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000109637, whole genome shotgun sequence.
ACCESSION   DASCQP010000038 DASCQP010000000
VERSION     DASCQP010000038.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 5012)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5012)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5012
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000109637"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1545
                     /locus_tag="QF480_00605"
     CDS             <1..1545
                     /locus_tag="QF480_00605"
                     /inference="COORDINATES: protein motif:HMM:TIGR01701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FdhF/YdeP family oxidoreductase"
                     /protein_id="HJN05090.1"
                     /translation="KKNGGKVVIVNPIPEAGNNAFVNPQNPLSILKGGRQLSDLFLQV
                     KINGDIALLKAAMFLLLEEENKKPGSVFDLEFINNKTTGFDIFLEDLRKTNYKEAVTA
                     SGIPEAQVRAFANLLIQKKKIIFCWAMGLTQHENGVNNIREVVNLLLLKGSIGKPGAG
                     TCPVRGHSNVQGDRTMGILKAPSTALLDSIDKNFSITSPRKHGYDVVESIKAMDEGKI
                     KLLMAMGGNFVSAAPDSEFTGKAVQKCNLTVQVSTKLNRSHLITGKEALILPSISRSE
                     SDKQKSGTQFVTVENSMGIVHTSKGEFTPASHNLMSEPAIVARLAEILHGNTPINWNE
                     MTKNYDTIRNHIESTISGFNDYNKRVRKAAGFYLQNGAREAEFNTASKKAVFTINNIP
                     NRTVAANNFILMTIRSHDQYNTTIHGMDDRYRGIFNERRVLLMNKKDMLAQQLNHLDI
                     VNITSIYKGKERHANNFKVIEYDIAKGCVATYFPEANVLVPIDSVAKKSNTPTSKFVE
                     VKLQKV"
     gene            1592..1936
                     /locus_tag="QF480_00610"
     CDS             1592..1936
                     /locus_tag="QF480_00610"
                     /inference="COORDINATES: protein motif:HMM:NF013595.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05091.1"
                     /translation="MPWGIAVDGNDNVFVANFNGKRLSYIAGANTSSLPPGFNTGDPI
                     SPDGGYTFDGFERVTGVQVDPSGNVWCCNNWEMIPVQTNPGSHQLVVFIGLAAPVETP
                     LIGYPRSPHTEN"
     gene            complement(2012..2428)
                     /locus_tag="QF480_00615"
     CDS             complement(2012..2428)
                     /locus_tag="QF480_00615"
                     /inference="COORDINATES: protein motif:HMM:NF013629.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HJN05092.1"
                     /translation="MEENILLKQLLRERKLKATSTRLEVLSVISGYNKAIPFSEIQNA
                     LHDFDRVTLYRTINSLMKSGIIHKASVGEKETFYAVCSSKCSSDSHTHKHIHFKCSNC
                     KAVTCVQADSAINFAIPGHTINNFEIEATGICVACN"
     gene            complement(2442..4757)
                     /locus_tag="QF480_00620"
     CDS             complement(2442..4757)
                     /locus_tag="QF480_00620"
                     /inference="COORDINATES: protein motif:HMM:NF012801.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HJN05093.1"
                     /translation="MWKLSKYIAVIIILGLSVVTYAQNCNLTVSGFVKDLSTDTPIIY
                     ANIFVKELQSGYVTDSAGYFSTKTMCPGKYHVSISHIRCETQELYLHISGDTVLTIFL
                     DHNSHLLNEVSITGEGGEVTTEETQSLNSENITQNSNKNLASMLENISGVSTINNGSG
                     ISNPVVDGLYGNRISILNNGIVQSGQQWGVDHSPEIDPLAANRITVIKGVGALEYQGS
                     SLGSIILVEPEKIDIEPHLHGEARYFFETNGFGNGLNLELQQYSKVFGWRAIGTLKKS
                     GDNRTSKYFLRNTGNQEANIALQFEKLWNNKWYSDLYFSSFNADYGILRGSHIGNLTD
                     LEEAFERDVPFFTQDQFSYSISAPYQKVNHILLKFHTKYSVSEKQWFDITYAGQYNLR
                     KEFDVRRSGRSDIPALSLKQSSNYFEVKYKNYLKNNWELKSGIQLNRIDNTNLPETGI
                     LPLIPDYITYEFGVFGIISKTLEKTTFELGGRYDFENRKVATISSSIPREIIRFENDY
                     HNFSGMVGISYQLGDGWEVAYNFGSISRNPEVNELYSNGLHQGVAGIEEGDPNLGKEI
                     SFKNTLSIKGAVKDKLFFEGLFYFQQIDNFIFLNPQDEVRLTIRGAFPVFKYEQTDAR
                     LIGFDLTATYKLTERLNITGKYSYLNGHDLSNDIPLVYMPPNNLYADFSYYIPKFEKL
                     QNIEFQINSRLVFEQKNILPSQDFVAPPGSYYLIGLKASAEKQLSKLRLNMYVRVENL
                     LNETYRDYLNRQRYFADDLGFNLIVGINISF"
     gene            complement(4741..>5012)
                     /locus_tag="QF480_00625"
     CDS             complement(4741..>5012)
                     /locus_tag="QF480_00625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05094.1"
                     /translation="EEVEEEADEHQFFFQTSLSGVNFSYDDMDANGNPIGLLTTVTTE
                     GPGNGTITVILRHEPDKFALGVSNGDITNAGGETDIEVVFNVEVK"
BASE COUNT         1649 a          912 c          852 g         1599 t
ORIGIN      
        1 aaaaaaaatg gtggtaaagt agttattgtt aaccctattc ctgaagcagg aaacaatgca
       61 tttgttaatc ctcaaaaccc tttatcaata ttaaaaggag gaagacagct ttcggactta
      121 tttctacaag taaaaattaa tggagacata gcccttttaa aagctgcaat gtttttatta
      181 cttgaagaag aaaacaagaa acctggtagt gtatttgatt tagagtttat taacaataaa
      241 accactggtt ttgatatctt tttagaagat cttagaaaaa ctaactataa ggaagctgtt
      301 actgcaagtg gtattcctga agcacaagtt cgagcttttg caaacttatt aatacaaaag
      361 aagaaaataa ttttttgctg ggcaatggga cttactcaac atgaaaacgg tgtcaataat
      421 atcagagaag tagtaaacct attattacta aaagggagca taggcaaacc cggtgcagga
      481 acctgtcctg ttagaggaca cagtaatgta caaggtgatc gtacaatggg tattttgaaa
      541 gctccctcaa cagctctctt agatagtatt gataaaaact tctctattac ttctccaaga
      601 aaacacggat atgatgtagt agaatctatt aaagcaatgg atgaaggaaa aattaagtta
      661 ttaatggcaa tgggtggtaa ttttgtttct gctgcaccag atagtgaatt tacaggtaaa
      721 gctgtgcaaa agtgtaactt aacagtacaa gtttcaacca aattaaaccg atcgcactta
      781 attactggaa aagaggctct aattttacca tctatctctc gttccgaatc agataagcaa
      841 aaatcaggaa ctcaatttgt aaccgtagaa aattctatgg gcatagtaca cactagtaaa
      901 ggagaattta cccctgcttc tcataattta atgagcgaac cagctattgt tgcccgacta
      961 gcagagatac ttcatggtaa tactcccatt aactggaatg aaatgactaa aaattacgat
     1021 accataagaa accatataga atctacaata tccgggttta atgattataa caaacgtgtt
     1081 agaaaagctg ctggctttta tctgcaaaat ggagctagag aagcagaatt taacacggca
     1141 tctaaaaagg cagtttttac aataaacaat atccctaaca gaactgttgc agccaataat
     1201 tttattttaa tgaccattag atcacacgat caatacaata ctacaattca cggtatggac
     1261 gatcgttata gaggtatttt taatgaacga agagtgttgt taatgaacaa aaaagacatg
     1321 ctggcacagc aattaaacca tttagacatt gttaacatca caagtattta taaaggaaag
     1381 gaaagacatg ccaacaattt taaagtaatt gagtatgata ttgcaaaagg gtgtgtagca
     1441 acttattttc ctgaagctaa tgtattggtt ccaattgata gtgttgctaa aaaaagtaat
     1501 acgcctactt ctaagtttgt ggaagttaag ttacagaaag tataaattgt aatagctgtt
     1561 tacaaagtta ttatttagga gcagcttata tatgccatgg ggtattgcag tggatggcaa
     1621 cgacaacgtt tttgtagcca atttcaatgg taagagatta agctacatag ctggtgcaaa
     1681 cacatctagc ttacctccag gttttaatac tggtgatcca atttcacctg atggcggata
     1741 cactttcgac ggatttgaga gagttacggg agtgcaagtt gatccttcag gaaacgtttg
     1801 gtgttgtaat aactgggaaa tgattcctgt tcagactaac cctggcagtc atcagttggt
     1861 tgtatttatt gggctagcag cacctgttga aacaccttta ataggttatc caagaagtcc
     1921 tcacacagaa aattagtatt gtcatatgaa agcgtgctca gtgaaaatta taaatgtaat
     1981 aatgaaaaca agagcatcat tttagtgttt attaattgca tgctacacat atgccagtgg
     2041 cttcaatttc aaaattatta atggtatgac ctggtatggc aaagtttata gcgctatctg
     2101 cctgaacaca tgttaccgct ttacaatttg agcatttaaa atgaatgtgt ttgtgagtat
     2161 gagaatccga ggagcatttg ctgctgcata ccgcataaaa tgtttccttc tcccctactg
     2221 atgccttgtg gataatacca cttttcatta aagaattaat ggtacgatat aatgtaactc
     2281 tatcgaagtc atgaagagca ttttgaattt cagaaaatgg aatggctttg ttataacctg
     2341 agattactga tagcacctcc aatctggtgg atgtagcttt taattttcgt tctctcagaa
     2401 gctgttttaa aagaatattt tcttccatat aaaataattt attaaaatga aatatttata
     2461 cctacaatca aattgaatcc aaggtcatca gcaaaatagc gttgacgatt aagataatca
     2521 cggtatgttt cattgagtaa attttctact ctgacataca tgtttaacct cagtttactt
     2581 aattgcttct cagctgatgc cttgaggcca atcaagtaat atgacccggg tggtgcaaca
     2641 aaatcttgag aagggagtat gtttttttgt tcaaagacca gcctgctgtt aatttgaaat
     2701 tctatatttt gtaacttctc aaatttagga atataataac taaagtcggc ataaaggtta
     2761 tttggtggca tataaactaa cggtatatca ttgcttaggt catgcccatt taggtaacta
     2821 tattttcctg taatgtttag ccgttcagtt aatttgtagg ttgcagttaa atcaaatcca
     2881 atcagtctag cgtccgtttg ctcatattta aacacaggaa aagctccgcg tattgttaac
     2941 ctaacttcat cttgtggatt aagaaaaatg aaattatcaa tttgctgaaa ataaaataag
     3001 ccttcaaaaa acagtttatc cttgacagca ccttttattg ataatgtgtt tttaaatgaa
     3061 atttctttgc caagatttgg atcaccctct tcaattccag caaccccttg atgtaagcca
     3121 ttgctatata actcattcac ttctggattt ctagatatgg agccaaaatt ataggctacc
     3181 tcccatccat caccaagctg ataactaatt ccaaccatgc cactaaaatt atgataatcg
     3241 ttttcaaacc gaataatttc tcgtggaata ctggatgaaa ttgtagcaac ttttctattt
     3301 tcaaagtcat atctaccccc taattcaaag gtagtcttct caagggtttt agaaattata
     3361 ccaaacaccc caaactcata tgtaatataa tcaggaataa gaggcagtat gcctgtttcc
     3421 ggcaggttcg tattatctat cctattcaat tgaataccac tttttaattc ccaattattt
     3481 tttagatagt ttttatattt aacttcaaaa taatttgaag actgcttcaa actcaacgct
     3541 ggtatgtctg atcttccgct tctacgcaca tcaaattctt ttcgcaaatt atattgacca
     3601 gcataggtaa tatcaaacca ttgcttttcg ctaacactat attttgtatg aaactttagt
     3661 aaaatatgat ttactttctg gtaaggggca ctgatggaat aggagaattg gtcttgtgta
     3721 aaaaacggaa catcgcgctc aaaagcttcc tccaaatcag taaggttacc aatgtgcgaa
     3781 cctcttagaa ttccataatc agcattaaaa gagctaaagt ataaatcgct ataccactta
     3841 ttattccaca acttctcaaa ttgcaaagct atattggctt cttggttacc cgtatttcgt
     3901 agaaagtatt ttgaagttcg gttatcgcca ctttttttta gcgttcctat ggcacgccac
     3961 ccaaatactt tagagtattg ctgcaattcg agattaaggc cgtttccaaa tccatttgtc
     4021 tcaaaaaagt acctggcttc tccatgtaaa tgtggttcta tgtcaatttt ttcaggttca
     4081 accagtataa tacttcccaa agaactccct tggtactcca atgctccaac accttttata
     4141 acagtaatcc tattggcagc taaagggtca atttcaggac tatggtcaac accccattgc
     4201 tgtccacttt gtacaatccc attgtttaag atggaaattc tgtttccgta aagcccgtcc
     4261 acaactggat ttgaaattcc actaccgtta ttaatggtac ttacacctga aatattttca
     4321 agcatcgatg ctaaattctt attggaattt tgcgttatgt tttccgaatt taacgactga
     4381 gtttcttctg tggtaacttc tccaccctcc cctgttatgg acacttcgtt caaaagatgg
     4441 ctattatgat ctaaaaatat tgttaaaaca gtatcaccag agatatgtaa atataactcc
     4501 tgtgtttcgc atctaatgtg actgatggaa acatgatatt ttccaggaca catggtttta
     4561 gtactgaaat aacccgcact atcagtcaca tatccagact gcagttcttt tacaaagata
     4621 ttagcataaa taataggcgt atctgtactc aaatctttta caaaacccga aacagtcaag
     4681 ttacagttct gagcgtaagt gactacagat aagcctaaaa tgataataac ggctatatat
     4741 ttacttaact tccacattaa atacaacttc tatatctgtc tcacctccag cattagtgat
     4801 atcaccattt gaaacaccta aagcaaactt gtctggttca tggcgcaaaa ttacagtaat
     4861 tgttccattc cctggccctt ctgtggttac tgttgttaat aaaccaatgg gattgccgtt
     4921 tgcatccata tcatcataag aaaagttaac tccacttaga gaagtttgaa aaaagaactg
     4981 atgttcgtcc gcttcttctt ctacctcctc gg
//
LOCUS       DASCQP010000039         2216 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000122259, whole genome shotgun sequence.
ACCESSION   DASCQP010000039 DASCQP010000000
VERSION     DASCQP010000039.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2216)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2216)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2216
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000122259"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1246)
                     /locus_tag="QF480_00630"
     CDS             complement(<1..1246)
                     /locus_tag="QF480_00630"
                     /inference="COORDINATES: protein motif:HMM:NF012356.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HJN05095.1"
                     /translation="MNNRLLLYHYWKELYPHLSAEKLDSFISSLEPLKNNVKIVDWYK
                     DAIVYSLYVGLFNHDFNGLTQKLDYIQKLGVNCLWLLPILESPMRDAGFDISKYDKIR
                     PQLLGLNEDSTKEEQENVFGNFLNEAHTRGIRVIFDVAINHSSDQHPWFLESKKSENN
                     DFSNFYIWSDKPDKYLDARLLFKGIEDSNWEKLGDRYYFHRFFSFQPDLNYRNPDVLI
                     AMSRNLIYWQALGVDGFRADAIPYLWKEEGTNCENLGKTHTIVKFFRAVLDFIKPGTL
                     LLAEACQKPHEVVKYLGQGDECHAAYHFPLMPMMFKAIATENGNPIKQTLSNEITPSI
                     KPDNQWFTFLRVHDELSLEHVYVSEDDRSLIHSSYCHKPEWDFRVGEGISARLSELFE
                     RDVNKIALSYSLMLTLLGTPVIY"
     gene            1498..>2216
                     /locus_tag="QF480_00635"
     CDS             1498..>2216
                     /locus_tag="QF480_00635"
                     /inference="COORDINATES: protein motif:HMM:NF020653.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclomaltodextrinase N-terminal
                     domain-containing protein"
                     /protein_id="HJN05096.1"
                     /translation="MKYFFSSIFTLIILLLGAQNTYSQIRLERVDPPFWWTDMKNPHL
                     QLMVYGNNISETEPSINYDGVLLEEVIHVESPNYLFLNIVIAENVNPGTFNIEFQNDK
                     KVKTTYQYELKKRDANPKLHKGFDNSDVIYLLMPDRFSNGNSDNDNMPHMLEKAGREN
                     PNGRHGGDIKGISNQLSYLVDLGITAIWINPLLENNMPAYSYHGYAVTDLYKIDARFG
                     TNDDYINLVEDSHSKGIKVIM"
BASE COUNT          770 a          384 c          332 g          730 t
ORIGIN      
        1 aataaataac aggtgtgcct agcaaagtaa gcattagtga ataagataaa gcaattttat
       61 tcacatccct ttcaaacaac tctgataacc ttgcacttat gccctcacct accctaaaat
      121 cccattcagg tttatgacag taactgctat gaattaaact acgatcatct tctgaaacat
      181 aaacgtgctc aaggcttaac tcatcatgaa cacgcaaaaa tgtaaaccac tgattatctg
      241 gtttaatact gggagttatt tcgttgctta gtgtttgctt tattgggttt ccattttctg
      301 tagctatcgc tttaaacatc attggcatta gagggaaatg atacgcagca tgacactcat
      361 ctccttgtcc aaggtatttt acaacttcat gaggcttttg acaagcttct gccagaagta
      421 aagttccagg ttttataaaa tcaagtactg ccctaaaaaa cttaactatt gtgtgagttt
      481 tgccaaggtt ttcacaattt gttccttctt ctttccataa atatggaatt gcatcggctc
      541 tgaaaccatc aactcccaat gcctgccaat aaatcaaatt tcgcgacatt gcaattaata
      601 catctggatt gcgataattt aagtcgggtt gaaaactaaa aaatctatga aaataatatc
      661 tatccccaag tttttcccag tttgaatctt caattccttt gaataacaac cttgcatcaa
      721 gatatttatc aggcttatca ctccaaatat agaaattgct aaaatcatta ttttcagatt
      781 tcttggattc caaaaaccac ggatgctgat cggatgagtg attaatggca acatcgaaaa
      841 taactctaat gcctcttgtg tgagcttcat taagaaaatt accaaataca ttttcctgtt
      901 cttccttagt actatcctca tttagtccta atagttgtgg gcgtatttta tcatatttac
      961 ttatatcaaa tcctgcatcg cgcattggtg attcaagaat aggcagcaac cataaacaat
     1021 ttactcccaa tttttgaata taatcaagct tttgagtaag cccgttaaaa tcatgattaa
     1081 aaaggccaac ataaagggaa taaactattg catctttata ccaatcaaca attttaacat
     1141 tattctttaa cggctctaaa gaagatatga aagaatccag cttttcagca gataaatgag
     1201 gataaagttc cttccagtaa tgatataaca ataatctatt attcattgta ttacgcaatt
     1261 atcatccaca aatgtagcat aaaagtaaat ctactattag atatatttat tactaactat
     1321 aattgtaaat atctccaatt aatattttat ttgtaagtat tgtatcaatc gtttgcataa
     1381 gaatgttgag agattggttc ctttatagta ttatattaaa agcaatacta ttaatattaa
     1441 ttacaaatat ttctgcaagc ccctgaaata tcttaatttt gataaaaaat ctaaataatg
     1501 aagtatttct ttagttcgat tttcactctt ataattttac ttttaggagc acaaaatact
     1561 tattctcaaa ttagacttga gagggttgat cctccttttt ggtggactga catgaaaaat
     1621 ccacatcttc aattaatggt ttatggtaac aatatttcag aaacagagcc ttccattaat
     1681 tatgatggtg tattacttga agaagttatt catgttgaaa gccctaatta tttatttctg
     1741 aacattgtaa ttgctgaaaa tgtcaatcct ggaacattta atattgaatt tcaaaatgac
     1801 aaaaaagtaa aaaccactta ccaatatgag ctaaaaaagc gagacgcaaa ccccaaactc
     1861 cataaaggat ttgacaactc agacgttatt tatttactga tgcccgatcg attcagtaat
     1921 ggaaattccg ataatgataa catgccgcat atgttggaaa aagctggaag agaaaatcca
     1981 aatggcaggc atggaggaga tattaaagga attagtaacc aactgagtta tttagttgat
     2041 ttggggataa ccgcaatatg gataaatcct ttgcttgaaa acaatatgcc agcttattca
     2101 taccatgggt atgctgtaac cgatttatat aaaattgacg cacgatttgg cacaaacgat
     2161 gattatatta atcttgttga ggattcgcat tcaaaaggta taaaagtaat aatgga
//
LOCUS       DASCQP010000040         7476 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000132013, whole genome shotgun sequence.
ACCESSION   DASCQP010000040 DASCQP010000000
VERSION     DASCQP010000040.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 7476)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7476)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7476
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000132013"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            14..1093
                     /locus_tag="QF480_00640"
     CDS             14..1093
                     /locus_tag="QF480_00640"
                     /inference="COORDINATES: protein motif:HMM:NF019310.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJN05097.1"
                     /translation="MGPTIGGFIMERFSWPWIYYLNIPAGIVILLIVLFTIRKESQQL
                     SKSLDLLSSLYVGLFVLPLSYGINNISSWGILSYQTLIVVVMVVTSLILLHLHSKKAT
                     DPLIPKGTFSNKLYISTLIGFMFLSFIMGTVLVLVGLYMGNILGFTTFHNAMIFIGFA
                     AAFSIVSPIGGKLSEKMDARIPACIGLGISIVGIILALFYGLHTTTSYLVISLTLMGF
                     IGLSIAPYNATMLKAVNRLTVDTLSGLYNMCGCMGFSVGVVISTNVLSQVSKAHLKDM
                     LHKANIVISEEAQSKFEAMITSADQNYQELADMTHLSKEKILYFLNESFLSGFHASMY
                     TIIGAGIVAIILTLLWMKVPASQPK"
     gene            complement(1154..1894)
                     /locus_tag="QF480_00645"
     CDS             complement(1154..1894)
                     /locus_tag="QF480_00645"
                     /inference="COORDINATES: protein motif:HMM:NF024880.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HJN05098.1"
                     /translation="MSPFESKNNLIEKPMHDPFEKAFNDYVAGNDKANIIVHCNKGDD
                     EIIPVSYFFRKYEEMPELEKIALGLCSGKILDIGAGSGSHSLYLQDKDFDVTALDIRS
                     GFVDIMKKRGVKDVIHSDVFDYKGNKFDTLLMLMNGIGFTQNFYGLSAFLRFAKKLLK
                     PSGQIILDSSDLMYLYKEDDGSYVINLNEDYYGEVEYIIEYMGTKGEPFSWLYVDFDN
                     LSLYAEEAGFNCKKIFEDNHYNYLASLF"
     gene            complement(1881..2783)
                     /locus_tag="QF480_00650"
     CDS             complement(1881..2783)
                     /locus_tag="QF480_00650"
                     /inference="COORDINATES: protein motif:HMM:NF036772.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LD-carboxypeptidase"
                     /protein_id="HJN05099.1"
                     /translation="MISPPFLKKGDKIGIVASARKIGKAELEPSLEIIRSNGFDVVYS
                     SNIFSEDNQFAGSDKIRANELQQMLDNKEIKAIIFARGGYGSVRIIDTLDFSRFISNP
                     KWLIGYSDATVFHSHVLRNYDIQTLHASMPVNFQENTKLALESLFDFLYGRLLQYEFK
                     SHPINKTGIAEGILTGGNLSVLYSLLGSNSFPDTEGKILFLEDLDEYLYHIDRMMMGL
                     KRAGVLSNLAGLLIGGMTDMNDNTIPFGKTAEEIIRETVDKYNYPVYFGFPAGHMNDN
                     RALVMGREAKIIPKEKDTVSFVTL"
     gene            2867..4915
                     /gene="metG"
                     /locus_tag="QF480_00655"
     CDS             2867..4915
                     /gene="metG"
                     /locus_tag="QF480_00655"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008646565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004825 - methionine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HJN05100.1"
                     /translation="MMKEFKRYTITSALPYANGPIHIGHLAGVYIPADIYARYLRLND
                     KDVLFIGGSDEHGVPITIRAIQLEVAPQDIVDKYHGIIKKSFEDFGISFDVYSRTSDQ
                     IHHQTASDFFTELYQNDKFIEKTNKQYYDEENQQFLADRYITGTCPHCGFEKAYGDQC
                     ENCGTSLSPLELKNPKSALSGNVPILKETKHWYLPLDQYEEWLDEWIIKGHKDDWKPN
                     VYGQVKSWVDQGLKPRAVTRDLDWGVKVPIKDAQGKVLYVWFDAPIGYISAAKEWSEK
                     TGNDWKPYWKDKDTKLLHFIGKDNIVFHCIIFPAMLKAEGSFILPENVPANEFLNLEN
                     DKISTSRNWAVWLHEYLEEFPGKQDVLRYVLTANAPETKDNDFTWKDFQARNNNELLA
                     IFGNFVNRTLVLTQKYFDGIVPEISSFDKEFSSTLEELAKYPDIISSSIERYRFREAL
                     SELMNLARLGNKYLTDMEPWKIFKTDIEKVQQIINVSLQIVASLSILSEPFLPFSSTK
                     LQKMINLKGLKWKDAGKPYLLKAGHEINKPELLFERIEDTVIETQIKKLMDTKEENKE
                     STPAKLSKSTIEYDDFMKMDIRTGTILDAIKVPKTNKLLQLTIDTGIDKRVVVSGIAE
                     YYKPEDIIGKKVSVLVNLAPLKLRGIESQGMILMAEDNDGKLCFVSPTEDFNNGSEIK
                     "
     gene            5072..6148
                     /locus_tag="QF480_00660"
     CDS             5072..6148
                     /locus_tag="QF480_00660"
                     /inference="COORDINATES: protein motif:HMM:NF013740.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HJN05101.1"
                     /translation="MTNSGIQSHSNSSALTLAAYLIIIGIAMYASSIITPILLALFIT
                     IVCAQPIRWLEKRRVPNGIAVLIILLVILLFFFGMAELIGRSVSQFSKDVPLYEARLS
                     ELTTGLFNTLHSMGFEISIDKMENLINPSKIMNYTAGFISAIGSIMGNMILILFIIIF
                     MLLELNSFSVKVNAIIKTSVGSVSYFKRIDKSIRQYLGLMTIMSLLTGVLVWIALTII
                     GVKYAILWALLAFVLNFIPNIGSIIASIPAIIFALIQIGGGAALWTLGSYVAINMTIG
                     SIIQPQIMGKGLGLSTLVVFISLIFWGFVFGTIGMFLSVPLTMVVKIILEQKESTKWI
                     AIMLGTEKEAQVIVEHNKSQLDNS"
     gene            complement(6222..>7476)
                     /locus_tag="QF480_00665"
     CDS             complement(6222..>7476)
                     /locus_tag="QF480_00665"
                     /EC_number="3.4.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF015536.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016805 - dipeptidase activity [Evidence
                     IEA];
                     GO_function: GO:0070004 - cysteine-type exopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="C69 family dipeptidase"
                     /protein_id="HJN05102.1"
                     /translation="TAYPSLNDKQLGIGESTFGGRKELQSDEGIIDCQRICQLMLERE
                     STARGAIKTAGILLAKYGWNDYGEVLTIADKNEVWHLEIVGPGKGKIGAVWVAQRVPD
                     NHISVNANASTIKEIDLKDKDHFMASDNVFDVAKQNGWWNPDEEEFRFCYAYAPNSRT
                     SFASRRREWRVFNLLAPSLKLNPNDENYPFSVQPDSLVTLEDIINVFKDYYEGTPFDM
                     TKSLTVTDKDGKTVISPLASPHMPYDANKLHKINGGWGPLGERTIARWYTMYATIIQL
                     RNWLPDEIGGVEWLAMDNVATSIYVPIYGCVSDLPQPYKTPGRVNGYTLNSAWWIFNR
                     LGTLASQRWGDMRYDVDSVWVPMQLNLIKSQKAVDQEALELYHQNKKDAIEFLNSYSN
                     EQGEKVMKEAIKLGDFLWTKYDEKF"
BASE COUNT         2360 a         1393 c         1303 g         2420 t
ORIGIN      
        1 tgttggatta gctatcggac caaccatagg gggtttcata atggaacggt tctcatggcc
       61 ttggatatat tatttaaata tacctgcggg aatcgttatt ctgcttattg ttctgtttac
      121 aattcgaaag gagtcgcaac aattaagcaa atcactggat ctgctctcta gtctatacgt
      181 gggattattt gtactacctc tcagctatgg cattaacaat atctcctcat ggggtatact
      241 cagctatcaa acattgattg tggttgtgat ggttgtcacc agcctgatcc tgcttcatct
      301 tcattctaaa aaagctactg atcccttgat cccaaaagga acattttcta ataaattgta
      361 catctccaca ttgatcgggt ttatgtttct ctctttcatc atgggaaccg tattggtact
      421 tgtagggctc tacatgggga atatacttgg ttttactact tttcataatg cgatgatctt
      481 tatcggcttt gctgctgcat tttcaatcgt atcaccaatt ggcgggaagc tctccgaaaa
      541 gatggatgcc cgaatacctg cctgtatcgg actagggata agcatcgttg gtatcattct
      601 ggctttgttc tacggacttc atactactac ctcatacttg gtaatcagtc tgacactaat
      661 gggcttcata ggtctctcta ttgcaccgta taacgcaact atgttaaagg cagtgaacag
      721 actaacagtg gatacactct ccggtctcta taatatgtgt ggttgcatgg gattctctgt
      781 cggagtagtg atcagcacaa atgtactgtc tcaggtttct aaagctcatt tgaaagatat
      841 gttgcacaaa gcaaatattg tcatttcgga agaagcacaa tctaagttcg aagccatgat
      901 tacatcagct gaccaaaatt accaagagtt agctgatatg acacacctgt cgaaagagaa
      961 gatcctgtac tttttgaacg aatcattttt aagcggtttc catgcttcta tgtatacaat
     1021 tattggtgca ggaattgtag ctattatact aaccctgtta tggatgaaag ttcctgcttc
     1081 acaacccaaa tgatgatatt ccaggatttc ctttggctat tcaaataatt acagggacgg
     1141 aacaattgta ttctcagaac aaactcgcca aataattata gtgattatcc tcaaaaatct
     1201 tcttgcaatt aaaacctgcc tcttcagcat atagactcag gttgtcaaaa tcaacataca
     1261 gccagctaaa aggttctcct tttgttccca tatattcaat aatgtattca acttcaccat
     1321 aataatcttc gtttagattg atgacataag agccgtcatc ttctttatat aagtacatta
     1381 aatcggatga atccaaaatt atttgtccac ttggcttaag tagttttttt gcaaatctta
     1441 gaaaagcaga caacccatag aagttttgag taaaccctat tccgttcatc agcataagta
     1501 atgtatcaaa cttattgcct ttgtaatcaa aaacatcaga atgaataaca tctttaacac
     1561 ctctcttttt cataatatca acaaacccag atcttatatc taaagcagtt acatcaaaat
     1621 ctttatcctg aagatataaa gaatgactac cagatcctgc tccaatatct aatatctttc
     1681 ctgaacacaa tcctaaggct atcttttcca attctggcat ctcctcatac ttcctaaaaa
     1741 aatatgaaac cggaataatc tcatcatcgc ccttattaca atgaacaata atattagcct
     1801 tgtcgttgcc ggctacatag tcgttaaatg ctttttcgaa aggatcgtgc atgggttttt
     1861 caatgagatt atttttactt tcaaagggtg acaaaactta ccgtgtcttt ttctttcggt
     1921 ataatttttg cttctcttcc catcactaaa gccctgttat cattcatgtg gcctgccgga
     1981 aaaccaaaat aaacaggata gttatattta tcaacagtct cccggataat ttcctctgct
     2041 gtttttccga atggaatagt attgtcattc atatcagtca tacctccaat aagtaaacca
     2101 gcaagatttg ataatactcc tgctcttttt aatcccatca tcattctatc tatgtgatat
     2161 agatattcgt caagatcttc taaaaataat atcttaccct ccgtatctgg aaaagaatta
     2221 ctacctaata aactatatag cactgaaaga tttccaccag ttaatatacc ttctgcaatt
     2281 ccggttttgt ttattggatg tgatttaaac tcatattgta gcagtcgccc ataaagaaaa
     2341 tcaaacaaag attctaaagc aagttttgtg ttttcttgaa aattcactgg cattgaggca
     2401 tgcagagttt ggatatcata atttcgtaat acatgactgt gaaaaactgt tgcatcactg
     2461 tatccaatca accatttcgg attagaaatg aatcggctga agtccaatgt atctataatt
     2521 ctcacactcc cataacctcc tcgtgcaaaa ataatagcct taatttcttt attatctagc
     2581 atttgctgca attcatttgc tcttatttta tcgcttccag cgaattgatt atcttcagaa
     2641 aagatattgg atgaataaac aacatcaaag ccattacttc taataatttc aagagaaggt
     2701 tccaattctg ctttaccaat tttacgtgcc gatgcaacaa tacctatttt atcacctttt
     2761 ttaagaaacg gtggacttat cattttgaac atattggtta actttgccga aattacagaa
     2821 ttttactcta aatatttatt gatactgaat attgagaaaa ttttaaataa tgaaagaatt
     2881 taagagatat acaattactt cggcgcttcc ttacgctaac ggaccaattc acataggcca
     2941 ccttgcagga gtttatattc cagccgatat ttacgctcgt tatcttcgtc taaatgataa
     3001 ggatgtactt tttattggtg gatcagacga gcatggggta ccaataacca taagggccat
     3061 acagcttgaa gtggcacctc aggatattgt agataaatat cacggaatta taaaaaaatc
     3121 gtttgaggat tttgggattt cgtttgatgt ttattcgcgt acatctgacc aaatacacca
     3181 tcaaactgca tcagattttt ttacagaact ttatcaaaac gataagttca ttgaaaaaac
     3241 aaacaagcag tattatgacg aagaaaacca acagttttta gctgatagat atatcacagg
     3301 tacttgtcct cactgcggtt ttgaaaaagc ttatggagat caatgcgaga attgtggaac
     3361 ttcactcagc ccacttgagt taaaaaatcc aaaatcagcc ttaagtggga atgtaccaat
     3421 tttgaaagaa acaaagcact ggtatttacc tttagatcaa tacgaagagt ggcttgacga
     3481 atggattatt aagggacata aagatgactg gaaaccaaat gtttacggtc aagtgaaatc
     3541 atgggttgat cagggactta aacctcgtgc cgtaacccgt gatttggatt ggggagttaa
     3601 agtaccgatc aaagatgctc aaggaaaggt actgtatgtt tggtttgatg cacccattgg
     3661 atatatttca gctgcaaaag agtggtcaga aaaaacagga aatgactgga aaccatattg
     3721 gaaagataag gatacaaaat tacttcattt catcggtaag gataatatag tttttcattg
     3781 tattattttt cccgctatgc ttaaggctga gggtagtttt atacttcctg agaatgtacc
     3841 tgctaacgaa tttcttaacc tggaaaatga caaaatatct acttccagaa actgggctgt
     3901 ttggttgcat gaatatcttg aggagtttcc agggaaacaa gatgtactgc gttatgtact
     3961 aaccgctaat gcacctgaaa caaaagacaa tgattttacg tggaaagatt tccaagcaag
     4021 aaacaacaat gaattgctgg ctatttttgg aaattttgta aacaggacac ttgtactaac
     4081 acaaaaatat tttgacggca tagttcctga aatttcttca tttgacaaag aattttcctc
     4141 aacattagaa gaacttgcaa aatatcctga tattatttca agtagcattg aaagatatcg
     4201 attcagggag gctcttagtg aattgatgaa ccttgcaaga ttaggcaaca agtatctaac
     4261 agatatggaa ccctggaaaa ttttcaagac agatattgaa aaagtacaac aaataattaa
     4321 tgtttcgtta cagattgttg caagtctttc gatcctatca gaacctttcc tgcctttttc
     4381 ctcgactaag ttgcaaaaga tgatcaacct caaaggattg aaatggaaag atgctggaaa
     4441 accttacctt ctaaaagccg gccatgaaat taacaaacct gagcttctat ttgagaggat
     4501 tgaggatact gttattgaaa cacaaataaa aaagctgatg gacacaaaag aagaaaataa
     4561 agaatctact cccgctaaac tatcaaaatc aactattgaa tatgatgatt ttatgaagat
     4621 ggatataagg acaggtacaa tactagatgc tattaaagta ccaaaaacaa ataagcttct
     4681 tcagcttacc attgatacag gtattgacaa acgtgttgtt gtatctggta ttgcagagta
     4741 ttataaacct gaagatatta tcggtaaaaa agtgagtgtt ctggttaatc tggcacctct
     4801 caaactacgc ggaatcgagt cacagggcat gatcctaatg gcagaagaca acgatgggaa
     4861 actgtgtttt gtgtctccta ctgaggactt taacaatggc agtgaaataa aataatcagt
     4921 aaattttaga gtaaactaaa gttatcccaa tataaagttt gactaatagt atacaaagtt
     4981 ttatatttgt ttgatcacta acgtgttgct tgtttttgat tttgccaact aggacataat
     5041 tacaaactga taacaccaaa aacccagtaa tatgactaat tcaggtattc aatcacattc
     5101 taactcttct gcattgactt tggcagcata tcttataatt attggtatag caatgtatgc
     5161 ttcgtcaatt atcacaccta tattattagc actttttatc acaattgtat gtgctcaacc
     5221 gataagatgg ttagaaaaaa ggagagtgcc caatggtata gctgtattaa ttatattgct
     5281 tgttatactt cttttctttt ttggtatggc agagctaatt ggccgatctg tgtcacaatt
     5341 ctctaaagat gttccgctat atgaagctcg gttaagtgaa ttaaccactg gtctgtttaa
     5401 cacattacac agtatgggtt ttgaaatttc gattgataaa atggaaaatt tgataaaccc
     5461 aagtaagata atgaactaca ctgcaggttt tattagtgcg attggcagta ttatgggcaa
     5521 tatgatcctg atactcttta ttattatatt tatgttactt gagcttaata gtttctcagt
     5581 aaaagtaaac gcaattataa aaacctcagt tggttcggta agttatttta aaaggattga
     5641 caaaagtatc cgtcaatatt tgggcctaat gactattatg agtctgttaa ctggtgtatt
     5701 agtttggatt gctctgacta ttataggagt taaatatgcc atattgtggg cgttattagc
     5761 ttttgtttta aattttattc caaatatcgg atcgattata gcaagtattc ctgcaataat
     5821 atttgctctt atccagatag gaggaggagc agcattatgg acacttggtt cttatgttgc
     5881 tataaatatg acaattggta gcataatcca accacagatt atgggcaaag gattaggtct
     5941 ttcaacactg gtagttttta tctccttgat tttttggggt tttgtatttg gtactatagg
     6001 gatgtttctg tcagtgccat tgactatggt tgtaaagatc atacttgaac aaaaggaatc
     6061 gactaaatgg attgcaatta tgcttggaac cgaaaaagaa gctcaggtta ttgttgagca
     6121 taataaatca caacttgata atagctaatg aagtttgaca tcagaaggcg aaatttggaa
     6181 ggatatatct tctgtctccc ggcttccgac ttcactctca cctaaaactt ctcatcatat
     6241 ttcgtccaaa ggaaatcacc taacttaata gcttctttca ttactttttc tccttgttca
     6301 tttgaatagg aattcagaaa ttcgatggcg tctttcttat tttgatgata tagttccaga
     6361 gcttcctgat caactgcttt ttgagattta ataaggttta gttgcattgg tacccaaacg
     6421 gaatcaacgt cataacgcat atcaccccaa cgttgtgatg caagagttcc aagtctgtta
     6481 aaaatccacc atgctgaatt taaagtataa ccgttaacac gacctggcgt tttatatggt
     6541 tgaggcaaat cgcttacaca gccgtagata ggaacataaa tagacgttgc aacattatcc
     6601 atagctaacc attcaacacc tcctatttca tcaggtaacc aattccttaa ctgaataatt
     6661 gttgcataca ttgtatacca cctagctatg gtacgctcgc ctaaaggacc ccatccaccg
     6721 ttaatcttat gtagtttatt agcatcataa ggcatgtgtg gacttgcaag tggtgaaata
     6781 accgttttgc catctttgtc agtaactgta agtgatttag tcatatcgaa aggcgtgcct
     6841 tcataataat ctttaaatac attaataata tcttccagcg taactaatga atctggttgt
     6901 accgaaaatg gataattctc atcgttagga ttaagtttaa gtgaaggtgc aagaaggttg
     6961 aacactctcc actcacgcct acgagaggca aatgatgtcc ggctattcgg ggcataggca
     7021 taacaaaagc ggaactcttc ctcatcagga ttccaccatc cattttgttt ggcaacatca
     7081 aagacattat cggatgccat gaaatgatct ttatctttaa ggtcaatctc tttgattgta
     7141 cttgcattgg cattcactga tatgtgatta tcaggtactc tttgtgcaac ccaaacagct
     7201 ccaatttttc cttttcctgg tccaactatc tccaggtgcc agacttcatt tttatcagca
     7261 atagttaata cttcaccgta atcgttccag ccatatttcg ctaacaaaat acctgctgtt
     7321 tttattgctc cccgtgcagt tgattcgcgc tccaacataa gctggcaaat cctctgacaa
     7381 tcaataatgc cttcatcact ttggagttct ttccgtccac caaatgttga ctctccaatc
     7441 cctagttgtt tatcattgag gctaggataa gctgta
//
LOCUS       DASCQP010000041         6822 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000133428, whole genome shotgun sequence.
ACCESSION   DASCQP010000041 DASCQP010000000
VERSION     DASCQP010000041.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 6822)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6822)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6822
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000133428"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1547
                     /locus_tag="QF480_00670"
     CDS             <1..1547
                     /locus_tag="QF480_00670"
                     /inference="COORDINATES: protein motif:HMM:NF012861.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HJN05103.1"
                     /translation="TVIFATYIVRDDIGHGVSRILYAISRKQGRIESHNMYSSMIGST
                     LTVAFGGSVGLEAPIVLTGSSFGSSLGRLFKLNRKTVMVLIGAGATGAIAAIFKAPVA
                     AVIFSLEVLMIDLTMGALIPLLIASATGASVAYLLMGRGVLLSFNLVDGFYIEHLPYY
                     IGLGLLTGLVSLYFTRTTLFIEGLFQKIKLKFVKVIIGGISLGLLIFMLPSLYGEGYE
                     FLELLIDNKVDGVVNEDLFHLSSTSTHLIIFLGLILIFKVVAMAVTNGSGGVGGIFAP
                     SLFMGGVFGVFYARFINLLPSVNIPVKNMALVGMAGVMAGVMHAPLTGIFLIAEFTGG
                     YELFTPLIITATISYLTIMYFEPHSIYTKHLAERGELFTHHKDKSVLQMMNVKNHLET
                     NFKTINKESNLGELVKVIATSERNIIPVIDDENNFYGLVFVNDIRNIMFNHDLYENTN
                     VANLMYMPDPVVSLNESMEEVAHKFQETGHYNLAVINDGKYMGFVSRARIFSTYRKLL
                     KEFSEE"
     gene            complement(1561..2649)
                     /locus_tag="QF480_00675"
     CDS             complement(1561..2649)
                     /locus_tag="QF480_00675"
                     /inference="COORDINATES: protein motif:HMM:NF013740.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HJN05104.1"
                     /translation="MKDTKTTNILLLILVIPLIFYLLKILSFIFIPLILAMFIALLFL
                     PLMRWLNKKRIPKSVSVIIVILIIIGAFKIGGELIKLSSKEILASDVALFEKTESKLV
                     DLIVSIEDFFGIERVQGDNVLVYYFQKTNIIKNFGLTLGFIQKTLSMTLMTAFFIVLL
                     LAGSINFQKLLNSTIFKQKYSSVKTFMKIENDIIKFIKVKFVISLFTGIGFGLACLIF
                     GVSFPIFWGLFAFAINFIQMIGSIISVVVLSLFAFVELDPTGILLFFIIVITGVQVIM
                     GGVLEPVFMGKSFSINVITILIMLMFWGYIWGIPGLIMAIPITVFLKVVLEQSPKTKI
                     IAELMAGPGRAVSKSWKKKNKSQTQPSS"
     gene            complement(3002..4645)
                     /gene="groL"
                     /locus_tag="QF480_00680"
     CDS             complement(3002..4645)
                     /gene="groL"
                     /locus_tag="QF480_00680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007654643.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HJN05105.1"
                     /translation="MAKDILFGNEARDGIKKGIDALTDAVKITLGPKGRNVLIDKSFG
                     APQVTKDGVTVAKEIELTDTVENMGAQMVKEVASKTNDIAGDGTTTATILAQSIYATG
                     LKNVTAGANPMDLKRGIDKAVIAVVKSLNAQTEKVGDSNEKIEQIASISANNDLNIGK
                     LIAEAMGKVKKEGVITIEEAKGIDTYVDVVEGMQFDRGYISPYFVTDTEKMETVYESP
                     LILIYDKKVSVMKDLLPILEKAAQTGKALIIIAEDVESEALATLVVNRLRGSLKVAAV
                     KSPGFGDRRKEMMEDIAILTGGTVISEEKGYKLEDTTLEMLGDAEKITIDKENTTIVS
                     GKGDKANIEARIKQIRAQIETTTSDYDKEKLQERLAKLAGGVAVIYVGAASEVEMKEK
                     KDRFDDALAATRAAIEEGIVPGGGVAFIRTIPALEKLKSENEDEATGIAIIKRAVEEP
                     LRQIVENAGLEGSVVANKVKEGKDDFGFNARTEVFENLIQAGVVDPTKVTRVALENAA
                     SISGMMLTTECVLSEHKDENAAPMPAMPPMGGGGMPGMM"
     gene            complement(4679..4957)
                     /locus_tag="QF480_00685"
     CDS             complement(4679..4957)
                     /locus_tag="QF480_00685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005858788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HJN05106.1"
                     /translation="MGKLNIRPLGDRVVVEPAKAEETTSSGIIIPDTAKEKPNQGTAV
                     AVSKGDKDHQMTVKVGDTILYGKFAGTEIEIDGSDYLIMSEKDILAVI"
     gene            complement(5102..5446)
                     /gene="secG"
                     /locus_tag="QF480_00690"
     CDS             complement(5102..5446)
                     /gene="secG"
                     /locus_tag="QF480_00690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005646537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HJN05107.1"
                     /translation="MYIFISVLILAVSILLGLIVLVQNPKGGGLAANLSGAGSQFMGV
                     RQTADFLEKASWGLAIALLILSLTATMVIPRDYTVVGAQQSEIMDQVDDINNATPIDF
                     QTPPPQEELQQE"
     gene            complement(5458..6222)
                     /locus_tag="QF480_00695"
     CDS             complement(5458..6222)
                     /locus_tag="QF480_00695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05108.1"
                     /translation="MNKDEFTTYLQDSTKLNAESVINLNGLINEFPYCQSARILLILN
                     LFKEKNIRYDAELKTTAVYANNRGILRKHIDRFSIENTKVVLPDEEIVSQKKQKSESE
                     TKRKETHKVKQKDEESGETYKDEAVSIAEVKSIIERHIRELEDENKLKIQKEPISKDT
                     SIPIKAKSILIDEFIKNEPSISRPKAQFFDPVHRAKESVVDNENIVSETLASIFSDQG
                     YHQKAIKIYQKLSLKFPEKSSYFAALIKKAEKELES"
     gene            complement(6230..6775)
                     /locus_tag="QF480_00700"
     CDS             complement(6230..6775)
                     /locus_tag="QF480_00700"
                     /inference="COORDINATES: protein motif:HMM:NF016290.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LptE family protein"
                     /protein_id="HJN05109.1"
                     /translation="MALSWLTMNRLQKYNILYIFVAFVIIGTMFSACGIYSFTGASIP
                     PEAKTVSVQYFPNRALLIEPTLSSVFTDILRDMFTSQTNLEMVERNGDLAIEGEIVNY
                     KITPVAIQADQTAAQNRLTIVINARFTNKFEPDKDYETKFTQFYDYSSTEDLNSIKEQ
                     LIDELSTNLAQDIFDKAVINW"
BASE COUNT         2073 a         1257 c         1112 g         2380 t
ORIGIN      
        1 taaccgtaat ttttgctaca tacattgtgc gtgatgatat tggccatggt gtaagcagaa
       61 tattgtatgc aatatcgcga aagcagggaa gaatagaatc tcacaatatg tactcctcta
      121 tgataggaag tactcttaca gttgccttcg gtggttctgt tggattagaa gcccctattg
      181 tgcttaccgg tagctcattt ggttcttccc ttggaagatt gttcaagctt aatcgtaaga
      241 ctgtaatggt attgataggt gctggtgcaa caggtgctat tgctgcgatt tttaaggctc
      301 cggttgcagc cgtaattttc tcattagagg ttttgatgat cgacctaaca atgggtgcat
      361 taattccact attaattgct tcggctacgg gtgcatcggt tgcttattta ttaatgggcc
      421 gaggagtttt gttatcattc aaccttgttg atggttttta tattgagcac ctaccttatt
      481 acattggcct tggcctactt acgggattgg tatccttata ctttacacga acaacattgt
      541 ttatcgaagg acttttccaa aaaataaaat taaaatttgt aaaagtaatt atcggtggga
      601 tatctttagg tttattaatt tttatgctcc cctcgcttta tggagaagga tatgaatttt
      661 tagaacttct tattgataat aaagttgatg gcgtggtaaa tgaggatcta ttccacttgt
      721 catcaacctc aacacactta ataattttcc tagggttaat tttaatattt aaagttgttg
      781 caatggctgt tacaaatggc agtggtggtg ttggaggtat atttgccccg tcacttttta
      841 tgggaggtgt atttggtgtt ttctatgcaa ggtttattaa tttgttaccg agtgttaata
      901 ttcctgtaaa aaatatggca ttggttggga tggcaggtgt tatggcaggt gttatgcatg
      961 ctccgctaac cgggattttt ctaatagcgg aatttactgg tggatatgaa ctttttacac
     1021 ctttgataat tactgcaact atttcctatt taacaataat gtattttgag cctcattcaa
     1081 tctatacaaa acacctcgct gaaagagggg aactatttac tcaccacaaa gacaaatcgg
     1141 ttcttcaaat gatgaatgtc aaaaatcatc ttgaaaccaa ctttaaaact attaataaag
     1201 aaagtaatct gggtgaacta gttaaagtta ttgcaacatc agaaagaaat ataatacctg
     1261 taatagatga tgaaaataat ttttacggat tagtttttgt taacgatatc aggaatatta
     1321 tgttcaacca cgatctatat gagaacacaa atgttgccaa ccttatgtac atgcctgacc
     1381 cggttgtaag tcttaatgaa tcgatggaag aagtagccca caaattccag gaaaccggac
     1441 attacaattt agcagtaata aacgacggga aatatatggg gtttgtgtcg cgggctcgta
     1501 ttttttcaac gtatcgcaag ctacttaaag agttttcaga agagtaaaac tctgtaatta
     1561 ttaactactg ggttgagtct gcgacttatt ttttttcttc catgatttgc taacagccct
     1621 gccaggacca gccattaatt cggcaatgat tttagttttt ggagattgtt ctaaaacaac
     1681 ctttaggaat acggtaattg gaattgccat aattaacccg gggatccccc aaatataacc
     1741 ccagaacatt agcattatca aaatagttat tacatttatt gaaaaagatt tgcccataaa
     1801 aactggctct aaaacacctc ccattataac ctgaacacct gttattacaa taataaaaaa
     1861 caataatatg cctgttggat caagctcaac aaaggcaaat aatgatagta ctactacaga
     1921 aataattgaa ccaatcattt gaataaaatt aatggcaaaa gcaaacaatc cccaaaaaat
     1981 tggaaaactg acaccaaaaa ttaagcaggc aagtccaaaa ccaattccgg taaacaagct
     2041 tattacaaat tttactttaa taaacttaat tatatcattc tcgatcttca taaaggtttt
     2101 tacagaagaa tatttttgtt taaatattgt actattcaat agtttttgga agtttattga
     2161 ccctgcaagc agtaatacga tgaaaaatgc tgtcatcagg gtcattgaaa gagttttttg
     2221 tataaaaccc aatgttaaac caaaattctt aataatatta gttttctgaa agtaataaac
     2281 aagtacgtta tctccttgta cccgttcaat tccaaaaaaa tcttcaatcg agactatcaa
     2341 atcaacaagt tttgattccg tcttctcaaa caaagcaaca tcactagcta atatttcctt
     2401 acttgaaagt ttaattaatt cacctcctat tttaaatgca cctatgatta ttaatattac
     2461 gataataaca ctaaccgact taggaattct ttttttatta agccatctca ttaatggtaa
     2521 aaaaagtaga gcaatgaaca ttgcaagaat gagtggtata aaaataaagg atagtatttt
     2581 cagtaaataa aaaataagcg gtataacaag tatcaatagt agaatattag ttgtttttgt
     2641 gtctttcata tcgtattttt cataaatatt tataaagtta ctaagataca agtaagttta
     2701 tatggtacta cactaacagg taaaattctg ttagtgtaat ttagaatctt gatttacact
     2761 ttgtttacaa tgcggcagtg attgatgtga tagattgttg atcccgatag ttatcgggat
     2821 tgatgatggt aatgatggct ggtggaggtg gaagaatgta accaccatac aggttaccaa
     2881 accacaattg gaatgaaaca actataaaca taaagcgcgt ttactgccaa aaaaaaacta
     2941 cagtaaacaa aaaagccatc ctattactaa ggatggcttt tatctagaat taacatatat
     3001 gttacatcat tcctggcatt ccgccgccac ccattggagg cattgcaggc attggtgctg
     3061 cattttcatc tttatgctca gaaagtacac attcagtagt aagcatcatg cctgagatag
     3121 acgctgcatt ttcaagagca acacgtgtta ctttagtagg gtcaacaacg cctgcttgaa
     3181 taagattttc aaaaacctct gttcttgcat taaagccaaa gtcatcttta ccttctttca
     3241 ctttgtttgc aacaaccgaa ccttcaagtc cagcattttc aactatctga cgaagtggct
     3301 cctcaacagc tcttttaatt atggcaatac ctgttgcttc atcttcattc tcgctcttca
     3361 gtttttcaag tgctggaatg gtacgaataa aagcaacacc accaccagga acaatacctt
     3421 cttcgattgc tgcacgtgta gcagctaatg catcgtcaaa acgatctttc ttttctttca
     3481 tttcaacttc gctggctgct cctacataaa taacagcaac accacctgcc aatttagcaa
     3541 gtctttcctg tagtttttcc ttatcataat cagaagttgt ggtttcaatt tgtgctctta
     3601 tttgtttgat acgagcttca atatttgctt tatcaccttt accactaact attgttgtat
     3661 tctccttgtc gatagtaatt ttctctgcat caccaagcat ttcaagagta gtatcctcaa
     3721 gcttgtagcc tttctcttca gatataacag taccacctgt aagaattgca atgtcttcca
     3781 tcatttcttt tcttctgtcg ccaaaacctg gagatttaac agcagccact tttaaagaac
     3841 cacgtaaacg attcaccacc aaagtcgcaa gtgcttcgct ttctacatct tcagctatta
     3901 taatcaatgc tttaccagtt tgtgctgctt tttcaagtat cggaagtaga tctttcatta
     3961 ctgatacctt cttatcataa ataaggataa gcggactttc gtaaacagtt tccatctttt
     4021 cagtatctgt tacaaagtat ggtgagatat aaccacgatc gaattgcata ccttcaacaa
     4081 catctacgta agtatcaata ccttttgcct cttcaatagt aataacacct tcttttttga
     4141 ctttgcccat tgcttcagca ataagtttac caatatttaa atcgttattt gctgagatag
     4201 atgctatctg ttcaattttt tcattgctat cgccaacttt ctctgtttga gcatttaatg
     4261 attttacaac agctattaca gctttgtcaa tacctctttt caaatccatt ggatttgcac
     4321 ctgcagtaac attttttaaa cccgttgcat agatgctctg tgcaagaata gtagcagttg
     4381 tagtaccatc tccagcaata tcgtttgttt tagatgccac ttctttaacc atctgggcac
     4441 ccatattctc aactgtatca gttagttcta tttcttttgc tacagttact ccgtcttttg
     4501 ttacttgagg tgcaccaaaa gatttgtcaa tgagaacatt tctgccttta gggcctaatg
     4561 ttatcttaac tgcatctgtt aaagcatcaa tacctttctt aatgccatct ctggcttcgt
     4621 taccaaataa tatgtccttt gccattttat taaattttta attatttatt ctattttttt
     4681 aaattacagc aagtatatcc ttttcactca tgatgagata atcgctaccg tcaatttcaa
     4741 tttcagttcc ggcaaactta ccatacaaaa tagtgtcgcc aactttaact gtcatctggt
     4801 ggtctttatc acctttagat actgctactg cagttccctg atttggtttt tcttttgctg
     4861 tatcaggtat aataatacct gacgaagttg tttcttctgc cttagcaggt tcaaccacta
     4921 ctctgtcgcc tagtggtctg atgtttaatt ttcccatttc taatttataa tttattaact
     4981 tgaattgact tggtcataat tcgtgccaaa ctaaatatta aaaaaaatgt cagaatgtag
     5041 ctacttgctg aaagacaggt atgacattct gacatttgaa ctattaattt taaactattt
     5101 tctactcttg ctgaagttct tcttgaggag gaggtgtttg aaaatcgata ggagttgcat
     5161 tattgatatc atctacctgg tccataattt ctgattgttg agcaccaaca acagtgtagt
     5221 ctctaggaat aaccatagtg gcagtcaggc taagaattaa taaagctatg gcaagacccc
     5281 aagacgcctt ttcaagaaaa tcggcagttt gtcttacacc cataaattga gagcctgctc
     5341 cagataagtt tgcagcaaga ccacctccct ttgggttttg tactagcaca atcagtccta
     5401 acagtatgct tacagcaagt attagtacag aaataaaaat atacatcgtt ttattattta
     5461 agattcgagt tctttttcag cctttttaat aagggctgca aagtaactac ttttttccgg
     5521 aaatttcaag cttaattttt gataaatttt aattgctttc tgatggtagc cttgatcgct
     5581 gaatatactt gcaagcgtct cactaacaat gttttcatta tctaccacac tttccttagc
     5641 tctatgaaca ggatcaaaga actgtgcttt tggacggcta atggatggct cattcttaat
     5701 aaattcatca attaaaatac tttttgcctt aattggaata gatgtatctt tagagattgg
     5761 ttctttttga atttttagct tattttcatc ttcaagttca cgaatgtgac gctcgataat
     5821 acttttaacc tcagcaatag aaacagcttc atctttatat gtctctccag attcttcatc
     5881 cttttgttta accttatgtg tttccttcct tttagtttcg ctttcgcttt tctgtttctt
     5941 ttgactaaca atttcctcgt caggcaaaac aactttagta ttttctatgc taaacctgtc
     6001 gatatgcttt ctcaatatcc ctctgttatt tgcatatact gctgtagttt taagttcagc
     6061 atcgtatctt atgttctttt ccttaaacag atttagtatg agtaaaatac gcgccgattg
     6121 acaatagggg aattcgttta tcaatccgtt aagatttata actgattctg catttaactt
     6181 ggttgaatcc tgtaaatatg ttgtaaactc atccttattc ataagctatc taccaattta
     6241 ttactgcctt gtcaaaaata tcttgtgcca aatttgtact taattcatca attaattgct
     6301 cttttatcga atttagatct tcagtagatg agtaatcgta aaactgtgta aatttagttt
     6361 cataatcttt atctggttca aatttgttgg taaatcttgc attaataaca attgtaagcc
     6421 tattttgagc cgcagtttgg tccgcctgaa tagcaaccgg ggttatctta taattaacta
     6481 tctcaccctc aatagcaaga tcaccatttc gttcaaccat ttcgagattt gtttggcttg
     6541 taaacatatc tctgagaata tcagtaaaaa cagagcttag agtaggttct ataagtaaag
     6601 cacgatttgg aaaatattga actgaaacag ttttagcttc tggaggaatt gatgcgccgg
     6661 taaaggagta aataccacat gctgaaaaca ttgtgccgat aattacgaat gcaacaaata
     6721 tgtataaaat attatatttt tgaagcctat tcatggttaa ccaggataat gccattttta
     6781 ttgtagcgca attgattatc gaatctcatt ggtaatgtag ta
//
LOCUS       DASCQP010000042         1942 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000149703, whole genome shotgun sequence.
ACCESSION   DASCQP010000042 DASCQP010000000
VERSION     DASCQP010000042.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1942)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1942)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1942
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000149703"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1366
                     /locus_tag="QF480_00705"
     CDS             <1..1366
                     /locus_tag="QF480_00705"
                     /inference="COORDINATES: protein motif:HMM:TIGR03975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="RiPP maturation radical SAM C-methyltransferase"
                     /protein_id="HJN05110.1"
                     /translation="LLINGNHPNLENNLPYGVINKKMASKILLQPKSKRKIPRATITN
                     INDAPTPNFDGYFETINRSSFNSRMKSGMILATSRGCWWGEKNACTFCGLNGCETKYQ
                     SKDTEVILNEFAKVTKKYKTYQFALSDNTINKKYFNSLFPALAKLPRKYNMFFETNTG
                     LSKHEFQIIHNMGVRWLQAGIEGLHDDLLKLMSKGADTLTNVNFLKNASEFGIFVVWH
                     LLVCFPKENDNWYLETAEWLPQIYHLQPLKGIYPIRYDRFCSYQQNPEKYNLEITPFD
                     AYTNIYPISEEAINGIAYYFKDSNNTKPYNDGYVVPKGVAALNKCEDEWRGMYYSNNR
                     PVLKMTERGDDIVIFDTRKCRVENKIILKGIHADVYRLCSSPIHIKNLSYKFLKVFSY
                     TPNKQLIVDAISYLLAKKIMLKINNKILSIAIEGSNKIQQNRFSFPGGQVELPSINKM
                     LANG"
BASE COUNT          733 a          299 c          293 g          617 t
ORIGIN      
        1 attattaata aacggaaatc acccaaacct tgaaaataac ctaccttatg gagtgataaa
       61 taaaaaaatg gcatccaaaa ttttacttca gccaaaaagt aaaagaaaaa tacccagagc
      121 aacaattaca aatataaatg atgcacctac tccgaatttc gatggttatt ttgaaacaat
      181 taatagatca tcttttaatt cacgcatgaa gtcaggaatg atacttgcta catcaagggg
      241 ttgttggtgg ggagagaaaa atgcatgtac cttctgtggc ctaaatggtt gcgaaacaaa
      301 atatcaatca aaagatacag aagttatatt aaatgagttt gcaaaggtta ctaaaaaata
      361 taaaacttat cagtttgccc tctcagataa tacgataaat aaaaaatatt tcaattcact
      421 ttttcctgct ttagcaaagt tgccgagaaa gtataatatg ttttttgaga ccaacacagg
      481 gttatcaaaa catgagtttc aaattattca taacatgggt gttaggtggt tacaggctgg
      541 aatcgaaggt ctgcatgacg atctattaaa gctaatgagt aaaggtgctg ataccttaac
      601 aaatgtaaac tttttaaaaa atgctagtga atttggaatt tttgtagtct ggcatttact
      661 agtatgtttt ccaaaagaaa atgacaactg gtatctggaa accgcagagt ggcttccgca
      721 aatctatcat ctacagcccc ttaaaggtat ttatcccata aggtatgata gattttgttc
      781 gtatcaacaa aatccagaga aatataatct tgaaataact ccatttgatg catatacaaa
      841 tatttacccc atttcagaag aagcaattaa tggaatcgca tactatttta aagatagtaa
      901 taatacaaaa ccttataatg atggatatgt tgtaccaaaa ggtgttgctg ccctaaataa
      961 atgcgaagat gagtggcgcg gtatgtatta cagtaataac agacctgttt taaaaatgac
     1021 agaaagaggg gatgatattg tgatttttga tacacgtaaa tgtagagttg aaaacaaaat
     1081 tatactcaaa gggatacatg cagacgtata caggttatgc agttcaccaa tacatattaa
     1141 gaacctatct tataaattct taaaagtctt ctcttatact ccaaacaaac agttaatagt
     1201 agatgctata tcctatcttt tggccaagaa gattatgcta aaaatcaata acaaaatatt
     1261 aagcatcgct attgaagggt caaataaaat acaacaaaac cgattctcct ttccaggtgg
     1321 ccaggtagaa ttaccaagta ttaacaaaat gcttgctaat ggatagaaat atcaaaacaa
     1381 cttgggcatt cagtaattat taaagtatat atcaaaacaa accaatccta ctgttttaca
     1441 ttataaaaaa attagaatgg catattcttg agtaattaat cctttgtaac tcaattaaat
     1501 atatgtattt ttatcaaaac aaataacctt catcaaaaag gttaaccccc caaaaggaaa
     1561 actattagta ggaattagca tagaccgtaa tagtaaacat tttgcattat ccccatcctt
     1621 aatgcttatt accaaaaaag aaaaagcata ttccttttct tatgatttaa taaatcagga
     1681 tatatatttt acaatgtgtt gcaaattaag gtttagataa tttattgaga tttaaccttg
     1741 tctattctta atcaacaacg gtaacaatag tcttatccaa tcccattacc ctcgcttagc
     1801 aaaatgtatg tcttcaaaca aacttgaact tttagggtca aaaattaaga gagtgttaat
     1861 acaaaactaa ttgttttttt tgatattgtt tttttctttc atttagcgtt ttatttttga
     1921 ttcttttacg ttgttttaat tt
//
LOCUS       DASCQP010000043         2260 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000151949, whole genome shotgun sequence.
ACCESSION   DASCQP010000043 DASCQP010000000
VERSION     DASCQP010000043.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2260)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2260)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2260
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000151949"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1558)
                     /locus_tag="QF480_00710"
     CDS             complement(<1..1558)
                     /locus_tag="QF480_00710"
                     /inference="COORDINATES: protein motif:HMM:NF012656.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJN05111.1"
                     /translation="MNDKKVLKGGEFLIRETEAKDIFIPEEFDEEQRMMAQTCREFTE
                     TQVNPNMDQLEKHDRKLLRKLMQDAGDLGILGISVPEEYEGFGQNFVTSMLTTEEMGK
                     GYSFAVAYSAHVGIGTLPILYYGTEEQKQKYIPGLANGKLVGAYCLTEADAGSDPNSG
                     KAEAVLTKDGKFYNLNGVKIWITNGGVADLFIVFAKVKGDKNLSAFIIEKELKGLTIG
                     ADEVKMGIKGSTTVQLYMDDVKVPVENMLGEQNSGFKIALNILNLGRIKLSGATVGAC
                     KATIDNALNYANERKQFGSPISNFGAIKFKLSEMAILTFASESLTYRASQNIDDAIAG
                     YIADGMDKGKASLEGIRQYAIEASIAKVYGSEVLDYIVDEAVQIYGGMGYSAETLVER
                     AYRDSRINRIFEGTNEINRMVTVGELLKRGMKGELDLITPAKAVASELLAIPDFGAAS
                     PGYFEAKHTIITNLKKSILLVAGAALQKYMDKFADEQEIIMNLADMINYTYAAESMML
                     RVEKLNNLYDD"
     gene            complement(1595..>2260)
                     /locus_tag="QF480_00715"
     CDS             complement(1595..>2260)
                     /locus_tag="QF480_00715"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: protein motif:HMM:TIGR01930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003985 - acetyl-CoA C-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
                     /protein_id="HJN05112.1"
                     /translation="VKSVNKALAAIKAGKFKDEIVPITIKENYFDNGSMEKRERVFDT
                     DEGPRPGTTIEGLSKLKPAFAANGNSTAGNSSQMSDGAGFVLVVSEKALKQYDLTPIA
                     RLVDYQVAGVEPYKMGIGPVAAIPKVLEHSGLSLRDIDGIELNEAFASQAIAVMNELN
                     ITPDIVNVNGGAIALGHPLGATGAKLTVQLLHELKRTKGKYGMVTMCIGIGQGAAGIF
                     EIL"
BASE COUNT          643 a          521 c          342 g          754 t
ORIGIN      
        1 catcatcata caagttgtta agtttttcaa ctctaagcat catagactca gcagcatatg
       61 tataatttat catatccgcc aagttcatga taatttcctg ttcatcggca aatttatcca
      121 tgtatttttg taatgccgcc ccagctacca gcaatatcga tttttttaaa ttcgtaatta
      181 tcgtgtgttt agcctcaaaa taacctggac ttgcagcccc aaaatctggt attgccaaca
      241 gctcacttgc tacagctttt gcaggagtaa tgaggtcaag ttctcccttc atcccacgct
      301 tcaatagctc tccaacagtt accatacgat ttatttcgtt agttccttca aaaattcgat
      361 tgatcctcga atcacgatat gctctttcaa caagtgtttc tgcagaataa cccatgccac
      421 cgtatatctg aaccgcttcg tcaacaatat aatctagtac ttcggagcca taaacttttg
      481 cgattgaggc ttcgatagca tattgacgta taccttcaag gcttgcttta cctttatcca
      541 ttccatcagc aatatatcca gcaattgcat cgtcaatatt ttgacttgca cgatatgtaa
      601 gtgattcaga ggcaaaagtt agtattgcca tttctgacaa tttgaattta atagctccaa
      661 agttcgaaat cggagaacca aactgttttc tttcgtttgc ataattcaaa gcattatcaa
      721 tagttgcctt acaagcacca acagttgcac ctgataattt gattctaccc aaattcagaa
      781 tattaagggc tatcttaaat cccgaatttt gttctcccaa catgttttca accggtactt
      841 taacatcgtc catataaagc tgtactgtag ttgagccctt tatccccatc tttacttcat
      901 cagcgccaat agttaaacct ttcagctcct tctcaataat gaaagcacta agatttttat
      961 caccctttac tttagcaaat acaataaaca gatcggcaac tcctccgttt gtaatccata
     1021 ttttaacacc gtttagatta taaaactttc catccttggt aagcacggct tctgccttcc
     1081 cagagttcgg atcagaaccc gcatctgcct cagtaaggca ataggcgcca acaagtttcc
     1141 cattagctaa cccaggaata tacttttgtt tttgctcctc ggtaccataa tacaagatgg
     1201 ggagagttcc aataccaaca tgtgctgaat aggcaacagc aaaactatac cctttaccca
     1261 tttcttcagt agtaagcata gatgtaacaa agttttggcc aaatccttcg tattcttcag
     1321 gcactgaaat gcccaaaata cctagatcac cagcatcttg cataagcttc cttaacaact
     1381 tacgatcgtg tttttcaagt tggtccatat ttgggttaac ttgtgtttct gtgaattctc
     1441 tacatgtttg agccatcatg cgttgttctt cgtcaaactc ttcagggata aaaatatctt
     1501 ttgcttctgt ttcacgaata aggaattccc caccttttaa aactttttta tcattcataa
     1561 tcttttcctt tcaactattt tgttgtctgt tttcttacaa tatctcaaaa attccggctg
     1621 caccttgtcc aattccgata cacattgtta ccataccata tttaccctta gtacgcttga
     1681 gttcgtgtaa taattgcacc gttaattttg caccagttgc accaagtgga tgtccaagag
     1741 caattgcgcc accatttaca tttactatat caggagttat atttaattca ttcatcacag
     1801 caatggcttg tgatgcaaat gcttcattta gttcaatacc atctatatca cgtaagctaa
     1861 gacctgaatg ttcaagtact tttggaatag ctgctaccgg tcctattccc attttatatg
     1921 gctcaactcc tgcaacttga tagtcaacaa gtcgtgcaat tggagtaagg tcatattgtt
     1981 ttaacgcctt ttcagaaaca acaagaacaa aaccagctcc atcagacatt tgtgacgagt
     2041 ttccagctgt ggaattaccg ttggcagcaa atgcaggttt aagtttggac agtccttcaa
     2101 ttgttgtacc aggtcgcgga ccttcatctg tatcgaaaac tctttcgcgt ttttccatcg
     2161 agccgttatc aaaataattc tcttttatag taataggaac tatttcatct ttaaacttac
     2221 ctgccttaat tgcagctaat gctttattaa ctgacttaac
//
LOCUS       DASCQP010000044         4613 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000152554, whole genome shotgun sequence.
ACCESSION   DASCQP010000044 DASCQP010000000
VERSION     DASCQP010000044.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4613)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4613)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4613
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000152554"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            216..893
                     /locus_tag="QF480_00720"
     CDS             216..893
                     /locus_tag="QF480_00720"
                     /inference="COORDINATES: protein motif:HMM:NF024957.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HJN05113.1"
                     /translation="MENNKIILGIKPILLALVIIFISNNIFAQTDSLQVQNTEPKQKK
                     KDRKRRDEFKVFAGLSVNEISIASDKYESVVAPGFILGATYKRGRFFYWELGTRYNNP
                     VYNLHDLSNSSDPNNILDGAFSVRSVDVPITFGINVLSITSRIVGLRVFVSAVPTFAL
                     GVGSNDINITKDNINSFMMYGQGGIGVDAAFLFLEAGLNYGFTDLFKNDIQSKPYQIF
                     LNLGFRF"
     gene            1145..2638
                     /locus_tag="QF480_00725"
     CDS             1145..2638
                     /locus_tag="QF480_00725"
                     /inference="COORDINATES: protein motif:HMM:NF027798.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-1,3-glucanase family protein"
                     /protein_id="HJN05114.1"
                     /translation="MKQLSIILTILIFIDGSLLAQTIPVKIVNHSDIADDSIFVAIIG
                     KQQENHHLFLWVDKDGTQRIQDTLDNTVYHSPQAPGQDSMFANCFFPLSEITDNTILL
                     HPIIGGRVWISENSQLFMRFLNQPGDTVSGGFTQPNITNPTDPNLKIIYEYIEFTSNN
                     FANGGLFYGNNSRVDAYRRPVSLEVKTDTGNVTLGDSATHSDVIAGFKKLIINDTTYK
                     HCLDTSNGVILQFSKTEAFFYDSIGRHYFKSHVDAIWAKYKTDTLKFKDPNGNIWSGL
                     VDSYDTLTFTGNNGQVGQIASRPTTLDIWGGQGVLAQIIHNIPNDKNVQKWMCAAFHR
                     GVIDITNADVQDWNDTSKFYKTPPFNHYAGFWHQPGISIDRLAYGFSYDDVGGQSSSL
                     PASKPDSIIIHWGWNDLGSSSVSEAMLMQPIKVYPNITSSRCTVSGLDRSYLLNIIDL
                     NGQLLESIKLSPNLDKIDLDLSNYSNGLYFIQVHSKNGIGIAKVIRR"
     gene            complement(2902..2975)
                     /locus_tag="QF480_00730"
     tRNA            complement(2902..2975)
                     /locus_tag="QF480_00730"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2939..2941),aa:Asn,seq:gtt)
     gene            complement(3170..3643)
                     /locus_tag="QF480_00735"
     CDS             complement(3170..3643)
                     /locus_tag="QF480_00735"
                     /inference="COORDINATES: protein motif:HMM:NF024304.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HJN05115.1"
                     /translation="MKGDYTKEQTRSHIEVVMKNALFCHLGMASNNNPYVVTVNFGYD
                     DEYIYFHGAQKGKKVDMITDNPNVCFEINYVDSILSNKQACNWGTKYRSIIGYGKVEI
                     LLDEAEREKALLAIMYKYSGTKEHEFNEHDLAHMNVYRIKHDCVTTKHSHWKWDE"
     gene            3929..>4613
                     /locus_tag="QF480_00740"
     CDS             3929..>4613
                     /locus_tag="QF480_00740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004583905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufB"
                     /protein_id="HJN05116.1"
                     /translation="MSEEKKNGKILEEVTSGDYKYGFFTDIETETAPKGLNEDIIRLI
                     SNKKKEPDWLLEYRLKAYRYWLTIDEPDWALLNHPPINYQDIIYYAAPKPKKELASLD
                     EVDPELIDTFNKLGISLEEQKVMTGVAVDAVIDSVSVKTTFQDTLAKYGIIFCSFSDA
                     VQNHPELVKKYLGTVVPYTDNYFAALNSSVFSDGSFCYIPKGVRCPMELSTYFRINAA
                     NTGQFERKLL"
BASE COUNT         1546 a          758 c          793 g         1516 t
ORIGIN      
        1 aaattaaaac aacgtaaaag aatcaaaaat aaaacgctaa atgaaagaaa aaaacaatat
       61 caaaaaaaac aattagtttt gtattaacac tctcttaatt tttgacccta aaagttcaag
      121 tttgtttgaa gacatacaat aataagaaag tacaatttat acttatattt gtgctcaaca
      181 tataatctaa tgctgtaatt ttaaaaatat aactaatgga aaacaacaag attattttag
      241 gtattaaacc aattcttttg gcgttggtta ttatttttat ttctaataat atttttgctc
      301 aaactgacag tttacaggtt cagaatactg agcctaaaca gaaaaaaaag gatagaaaaa
      361 gacgtgatga gtttaaggta tttgctgggt tgagtgtaaa cgaaataagt atagcatctg
      421 ataaatatga gtctgtagtt gcaccaggat ttatattggg agcaacttac aaacgcggaa
      481 gattttttta ctgggagtta ggtaccagat acaataatcc tgtttataat ctacatgatt
      541 tgtctaattc atcagatcct aataatatat tggatggagc tttcagcgtt agaagtgttg
      601 atgtgccaat cacctttgga attaatgtat tgtctataac aagtaggatt gttgggttac
      661 gtgttttcgt tagtgccgta ccaacatttg ccttgggagt tggaagtaat gatattaaca
      721 ttacaaagga caacattaac tcttttatga tgtatggaca aggaggaata ggtgttgatg
      781 cagcattcct cttccttgaa gcaggattaa attatggatt tactgatctg tttaagaacg
      841 atattcaatc aaaaccctac cagatatttt taaatctcgg attccgattt tagttagtag
      901 tttaaatcaa aaaaggttac aacctttaaa gtcttaacct tctgattttt agcgcccctc
      961 ctccaataca ccctctcaaa gaatcagctg atccagagag gataatttgt ttccagtccg
     1021 agaaatgtca tattattttg caattataag cttcttcact agttgcaata tcaaaatata
     1081 aatagtacat ttgtatttaa tacttttaat acttaatttc ttattaaaga agaaagggct
     1141 ataaatgaaa cagttaagta taatactaac gattctgatc tttattgatg gaagtcttct
     1201 tgcacaaact attccggtta aaatagttaa tcattcggac atagcagatg acagtatttt
     1261 tgttgctatc atcggtaagc aacaagaaaa tcatcactta tttctttggg tcgacaagga
     1321 cggcactcaa cgaatacaag acactcttga taatacggtc tatcattcac ctcaagcccc
     1381 ggggcaagac tctatgtttg cgaattgctt tttcccatta tcagaaatta ctgataatac
     1441 aatactctta catccgataa taggcggtcg ggtttggatt tccgaaaata gtcagttgtt
     1501 tatgcgtttt ctaaatcagc caggagatac tgtgtcaggg ggctttaccc aaccgaacat
     1561 aacaaaccca actgacccaa acctaaaaat tatttatgag tatatcgaat ttacctctaa
     1621 taactttgct aatggtggat tattttatgg taataactcc cgagtagatg cttatcgcag
     1681 acctgttagt ttagaagtaa aaacagacac cggtaacgtt accctagggg attcagccac
     1741 acattcagat gtcattgccg gatttaagaa attaattata aatgatacta catataaaca
     1801 ttgtcttgac acctcgaatg gtgttattct acaattttcc aaaacagaag cattttttta
     1861 tgatagtata gggaggcatt attttaaaag ccatgttgat gcgatatggg ctaaatacaa
     1921 aacagacaca ctgaaattta aagatcctaa tggaaatata tggtcaggtc ttgtggatag
     1981 ctatgatacg cttacattta ctggtaataa tggtcaagta gggcagattg ccagtaggcc
     2041 tacaacatta gatatttggg gtggacaggg agttttagct cagataatcc ataatatacc
     2101 taacgataaa aatgtgcaga aatggatgtg tgctgcattc cacaggggtg ttattgatat
     2161 taccaatgca gatgtacagg actggaatga tacttctaaa ttctataaga caccaccatt
     2221 taaccattat gcaggatttt ggcatcaacc gggaatcagt attgataggt tagcttatgg
     2281 cttttcctat gacgatgttg gtggccaatc ttcatcttta cctgcatcta aaccagatag
     2341 tataataata cattgggggt ggaacgacct tgggagttct tcagtttctg aagcaatgct
     2401 gatgcagcct ataaaagttt atcctaatat tacgagttct agatgtactg tcagcggatt
     2461 ggatagaagc tacttgttaa acataataga tttgaatggc caattgttag agtcgataaa
     2521 actaagcccg aaccttgata aaatcgatct tgacctaagc aactattcga atggcttata
     2581 ctttatccag gtgcattcta aaaatggaat agggattgct aaagttattc ggagataaat
     2641 ttaaattagg ttattatttc tattaggcat aaaggaatta taataaaata attgatgcta
     2701 ggaaaatata aagatcatac cgtattaagt tgtaatgttg atagacaaaa tcatatttgg
     2761 attattattg tactgaaaaa ctcttctgaa acatagcttg tatgaccaac ataataacga
     2821 tcgctttttt ttgagtacag aatatatata cagtacatac ttattaaaac gtaaaaaggc
     2881 cgctaaattg cggccttttt gctcctcctc ttggactcga accaaggaca ccctgattaa
     2941 cagtcaggtg ctctaaccaa ctgagctaag gaggattatt tgttacctgt caaaagcagc
     3001 caggaaaaca gggcgcaaag ataattatta ttctaattac gcaaatattt tttaattttt
     3061 tttgaggagg ttttgtaatt agtgcttaag ccaaataatt atctgaagtg atttccaatt
     3121 ttgcctaaat cttaaaatta caaaaagtca cttttatact aatagtcaac tactcatccc
     3181 atttccaatg actatgcttg gttgtcacac aatcatgctt aattcggtat acattcatat
     3241 gtgccaaatc atgttcgtta aattcatgtt cttttgtacc cgaatactta tacataatag
     3301 ctaacaaagc tttctctctt tccgcttcat ccaatagtat ctctactttt ccatatccaa
     3361 ttattgatcg gtatttcgta ccccaattac atgcttgctt attggaaagt atactatcta
     3421 cataattaat ttcgaaacat acgttagggt tgtcggtaat catatcgacc tttttacctt
     3481 tttgtgcgcc atgaaaatag atatattcgt catcatatcc gaaattaaca gttactacat
     3541 acggattgtt attgctagcc attccaagat gacaaaaaag agcatttttc ataacaacct
     3601 caatgtgaga tctggtctgt tcttttgtat agtcaccttt catattagtt gtgtttgggt
     3661 tatactagtt caattctatt caagcttata tgctttactt cccacaaatg tagacaaaat
     3721 acaggaattt ttctcttgta ataatcaaac ttcaggttag tgttctatag aatctaacat
     3781 cactcattta tacttgttaa agtatagtaa gtcagcatcg catagtcaac tcaagcatat
     3841 gttaaaaata gcaaaattaa atctattcaa tgtgggtaaa tttactactt ttgtggtctt
     3901 atttaaattt attctaaata ggcatgtgat gagcgaagaa aagaaaaacg ggaaaatatt
     3961 agaagaggtt acatcaggtg attataaata tggtttcttt actgatattg aaactgaaac
     4021 agcccccaaa gggttaaatg aggatattat tagacttata tcaaataaga aaaaggagcc
     4081 agattggcta cttgaataca gattaaaagc atatcgttat tggctaacaa ttgatgaacc
     4141 ggattgggca ctgcttaacc atcccccaat taattatcag gatattattt attatgctgc
     4201 cccaaagcca aaaaaagaac ttgcaagcct tgatgaggtt gatcctgaat taattgatac
     4261 ctttaataag cttggaatat ctttagagga acaaaaagta atgaccggag tagccgttga
     4321 tgctgttatc gatagcgtat ctgtaaaaac tacatttcag gatactttag ctaaatatgg
     4381 tattattttt tgctccttca gtgatgccgt acagaatcat cccgaacttg ttaagaaata
     4441 ccttggaaca gttgttccgt atactgacaa ttatttcgct gctcttaatt cttctgtttt
     4501 cagtgatggt tcattttgtt atattccaaa aggcgtacga tgtccgatgg agttgagcac
     4561 ttattttcgt ataaatgctg caaacaccgg acaatttgag cgaaaattac tta
//
LOCUS       DASCQP010000045         3917 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000154458, whole genome shotgun sequence.
ACCESSION   DASCQP010000045 DASCQP010000000
VERSION     DASCQP010000045.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3917)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3917)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3917
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000154458"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            231..1673
                     /locus_tag="QF480_00745"
     CDS             231..1673
                     /locus_tag="QF480_00745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008861584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0051119 - sugar transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar porter family MFS transporter"
                     /protein_id="HJN05117.1"
                     /translation="MIKRNNKHVYFVATIAAFGGLLFGYDTGVISGALLLIKTQFAEP
                     GAHQMLPELQEWVVSVVLIGAMIGAIISGKLADKFGRKIIIIVTSIIFIIGSTISGLA
                     PDVTFIIIGRIIIGLAIGVASFTVPLYISEISPKKIRGALVSLNQLAITIGIFASYLV
                     DLGFAETHEGWRWMFIMGVLPAIVLGLGMLFLPDTPRWLMSHKKDEAARLALEKTTDP
                     DDIQNEIDSIKQILLTESKNKSSISELLQPWLRPALIIGIGIMLFQQFTGINTVIYYA
                     PTIFQIAGFHGDFAPIMATTMVGIVNILFTIVAIWLLDRWGRKPLLYLGLSGMVVALT
                     ILGIAFNQAEALGSSLKWISVGSVAIYIAFFAISLGPIAWLIISEIYPLRIRGIAMSI
                     ATFSNWLFNFIVAKTFLTLTRALTIPGTEITMADGVQSSNPAGAFWLFAIIGIGGLIF
                     TYYYMPETKGQTLEDIQEHWVKGKQPRMLK"
     gene            1754..3673
                     /gene="htpG"
                     /locus_tag="QF480_00750"
     CDS             1754..3673
                     /gene="htpG"
                     /locus_tag="QF480_00750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018336750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone HtpG"
                     /protein_id="HJN05118.1"
                     /translation="MTLHKGKIDIKTEDIFPIIKKFLYSDHEIFLRELISNATDATQK
                     LKTLASLGKFSGELGDLTIHVEVDKKKKTITVRDSGLGMTGDEVKKYINQIAFSSAEE
                     FVKKFKTKSEAEQNNIIGHFGLGFYSSFMVSDKVEIKTKTYKKGGQTKAVRWECDGSP
                     NYSLEEIDKADRGAEVILHIDDENKEFLEDYKINELLNKYCKFLPIPIQFGMEKIQEP
                     IEGKKDKDGNQETKEVERPKIINNTNPLWKKKPSDATDEDYKNFYRELYPYSFEEPLF
                     HIHLNVDYPFNLTGILYFPKVKKDYEMQRNKIQLYSNQVFVTDSVEGIVPDFLTLLHG
                     VIDSPDIPLNVSRSYLQSDGNVKKISSYIMRKVADKLNELFKKDRESFEKKWDDIKIF
                     IAYGMISEEKFYEKAEKFALLKNVEGKYFTFQEYKKHIEKTQKDKDKKLVYLYATNKD
                     EQYSYIESATERGYDVLLMDGVLDSHLINSLEQKFKDSTFARVDSNTIDKIITKEDDA
                     PSKLDDKEKEKLKEVIERSINKETYHVVFENLSETDTPVTITQNEFMRRMKDMEKLGG
                     GGGMMMGMGNLPETFEMIVNTNNPIITKVMNEKTAAKQDKIVKQLYDLARLAKNLLVG
                     KELNDFVKRNIGNIK"
BASE COUNT         1404 a          625 c          690 g         1198 t
ORIGIN      
        1 aaattaaaac aacgtaaaag aatcaaaaat aaaacgctaa atgaaagaaa aaaacaatat
       61 caaaaaaaac aattagtttt gtattaacac tctcttaatt tttgacccta aaagttcaag
      121 tttgtttgaa gacatacaaa tattatgagt acgtttatta ggcacagata accatacaat
      181 aaaacgaata gaattcaaat catttttttt atactctaaa cttattaatt atgataaaaa
      241 gaaacaacaa acatgtttat ttcgtagcaa caatagcagc gttcggtgga ttattatttg
      301 gatacgacac aggtgttata tcgggtgcat tgttacttat taaaactcaa tttgcagaac
      361 caggagcaca tcaaatgtta ccggaattac aggaatgggt tgtaagtgtt gtgcttattg
      421 gtgcaatgat tggagccatt attagcggta aacttgctga taaattcggt cgtaagatta
      481 tcattatagt tacatctata atatttatta ttggttctac tatttcaggt ttagctccag
      541 atgtaacttt cataatcata gggcggatta taatcggatt ggcaataggt gttgcatcct
      601 ttacagtgcc actgtatatt tctgagattt ctcctaaaaa gatacgaggg gctttagttt
      661 cattaaatca gttagcaata actatcggaa tttttgcttc ataccttgtt gatcttggtt
      721 ttgctgaaac ccatgaaggc tggcgttgga tgtttattat gggagtgcta cctgctattg
      781 tactaggttt gggaatgttg tttcttccag acacaccaag atggctgatg agccataaaa
      841 aagatgaagc agccagacta gcacttgaga aaactactga ccctgatgac attcaaaatg
      901 aaatcgattc aattaagcaa atattgttaa ctgaatcaaa aaataaatca tctatctcag
      961 aattacttca accctggctt cgacctgcat taataatcgg tataggtatt atgttatttc
     1021 aacagtttac aggtatcaac acagtaatat attatgctcc taccatcttt cagattgctg
     1081 gatttcatgg ggattttgca ccaattatgg caaccactat ggtaggtata gtaaatatac
     1141 tttttacaat tgttgcaatt tggcttcttg atcgttgggg aagaaaacca ctattatatc
     1201 taggattatc agggatggtt gttgcattga ctatattagg aatcgccttt aaccaagctg
     1261 aagcacttgg atcatcctta aaatggatat ctgttggtag cgtggcaatc tacattgcct
     1321 ttttcgctat tagtcttggt cctattgcct ggctgataat atcagaaata tatcccttaa
     1381 ggataagagg aattgcgatg agtatagcaa ccttcagcaa ttggttattt aacttcattg
     1441 ttgctaaaac attcttaact ttaacaagag cactcacaat acctggtacg gaaattacta
     1501 tggctgatgg agtacagagc tcgaacccag ctggtgcatt ttggctattt gccattattg
     1561 gaattggggg attgatattt acctattact atatgcccga aaccaaaggg caaacgctgg
     1621 aagatatcca agaacattgg gttaagggaa aacaaccacg tatgctgaaa tagagaatag
     1681 acattttgtc acttgcttgt cattggcaca tactttgata tttggcttaa tcaaataaca
     1741 aaataaaatt acaatgactt tacataaagg caaaatagac attaaaactg aggatatttt
     1801 tccaataata aaaaaattcc tctattcaga tcatgaaata tttttacgtg agcttatttc
     1861 aaacgctact gatgcaacac aaaaacttaa aacccttgcc tcactcggaa aattttcggg
     1921 tgaattaggt gatcttacca ttcacgttga agtagataaa aagaaaaaaa ctattacggt
     1981 tcgtgatagt ggattgggaa tgaccggtga tgaagttaaa aagtacatca accaaattgc
     2041 tttttcaagt gccgaagaat ttgtcaagaa atttaaaact aaaagtgaag ctgaacaaaa
     2101 caacattatt ggccactttg gtttaggatt ctactcttcc ttcatggttt cggataaggt
     2161 tgaaataaaa accaaaacct ataaaaaagg tggtcaaact aaagcagtca gatgggaatg
     2221 tgatggtagt ccaaactact cgttagaaga gattgacaaa gccgaccggg gtgctgaagt
     2281 tattcttcat attgatgatg aaaacaaaga atttctggaa gattataaaa ttaacgaatt
     2341 actcaacaaa tattgtaagt ttctgccaat ccctatccaa tttggaatgg aaaaaattca
     2401 ggaacccatt gaaggcaaaa aagataaaga cggcaaccag gaaactaaag aagttgaacg
     2461 tccaaaaatt atcaacaata caaatcctct ctggaagaaa aaaccaagcg atgcaaccga
     2521 cgaagactat aaaaacttct atcgagagct ttatccatat tctttcgagg aaccactgtt
     2581 tcacattcat ttaaatgttg attatccctt taatcttaca ggtatactct atttcccaaa
     2641 agttaagaag gattatgaaa tgcaacgcaa taaaattcaa ctatatagta atcaggtttt
     2701 tgttactgac tcagttgaag gtattgttcc agatttccta acattattgc acggagtaat
     2761 agactcgcca gatatacctc ttaacgttag tcgttcttat ctgcaaagtg acggtaacgt
     2821 taagaaaatt tcaagttata ttatgcgtaa agttgctgat aaacttaatg aactcttcaa
     2881 gaaagacaga gaatcctttg aaaagaaatg ggatgacatt aaaatattca ttgcatatgg
     2941 aatgatttct gaagaaaaat tctatgagaa agctgagaag tttgctttac ttaaaaatgt
     3001 agaaggaaaa tatttcacat ttcaagaata taaaaagcat attgagaaaa ctcagaaaga
     3061 taaagataag aaactggttt atctgtatgc tacaaacaaa gatgaacaat actcatatat
     3121 tgaaagtgct actgaaagag gttacgatgt tttgctaatg gatggtgtac ttgatagcca
     3181 tcttataaat agtcttgaac aaaaatttaa agattcaact tttgctcgtg tcgattcaaa
     3241 tacaatcgat aaaataataa caaaggaaga tgatgctcct tcaaaacttg atgataaaga
     3301 gaaagaaaag cttaaagaag ttattgaacg aagcataaac aaagaaactt atcacgtcgt
     3361 atttgaaaac cttagtgaaa ctgacactcc tgtaaccata actcaaaatg agtttatgcg
     3421 tcgcatgaag gatatggaaa aactcggagg tggaggcgga atgatgatgg gtatgggcaa
     3481 tcttccggaa acttttgaaa tgattgtaaa cactaacaat ccgattatca caaaggtaat
     3541 gaatgaaaaa actgctgcta aacaagataa aattgttaaa caactgtacg atttggctag
     3601 gcttgctaaa aacttattag ttgggaaaga actaaacgat tttgtaaaga gaaatattgg
     3661 taatattaaa taattctttt ttctggtata tataagggga ggtctaaatg ttagtcctcc
     3721 ctttttgttt atggcatatt cctaattgcc atttaatatc ccaatcaaac tatcaaccca
     3781 ttgattttta gcttcgtcac tcaaattcag ataaagatca ggttcaatta attatacttc
     3841 cataataaga aactttccat ccctccatag tccatcaacc ctttgatatc ataatctttt
     3901 accaaagtaa tttgata
//
LOCUS       DASCQP010000046         4709 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000155393, whole genome shotgun sequence.
ACCESSION   DASCQP010000046 DASCQP010000000
VERSION     DASCQP010000046.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4709)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4709)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4709
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000155393"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..305
                     /locus_tag="QF480_00755"
     CDS             <1..305
                     /locus_tag="QF480_00755"
                     /inference="COORDINATES: protein motif:HMM:NF016241.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF481 domain-containing protein"
                     /protein_id="HJN05119.1"
                     /translation="KKVKTQFGAKALMVLKYEIFKNVDFSTKLELFSNYLHNPQNIDV
                     NWQVNITMKVNSWLNVNINTELIYDDDVIFHDANGNPIGPRTQFNENMQIGLAITF"
     gene            308..799
                     /locus_tag="QF480_00760"
     CDS             308..799
                     /locus_tag="QF480_00760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008143398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase family protein"
                     /protein_id="HJN05120.1"
                     /translation="MKCIGLISDTHGYIHPRMFSFFSNCDEIWHAGDICNTETIDKLR
                     SFKPVRAVYGNIDDGKIRLEYNEYEVFTVDGLKVILIHIGGYPGRYTKLAWQLINKHK
                     PGLFISGHSHILKVIPDKKNNLLHINPGASGNSGQHNFITFIKFSINNSELTDLEIFE
                     AVR"
     gene            complement(859..1371)
                     /locus_tag="QF480_00765"
     CDS             complement(859..1371)
                     /locus_tag="QF480_00765"
                     /inference="COORDINATES: protein motif:HMM:NF025491.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4293 domain-containing protein"
                     /protein_id="HJN05121.1"
                     /translation="MIQRKQSIYLFFAAALLCITYFVPLSSFIGEKDSLVLYLYQVKT
                     LVPGFSSPFTPFFILPLLISVTLIVIISIVTIFLYKKRKLQLILVRFMLLLLLIYLGV
                     YFFYYIDILENQSGGYASYQYSVPILETGMEIPTVIFIIPLVSAMLLFMAARGITNDE
                     KLVRSTDRLR"
     gene            1536..3305
                     /gene="rho"
                     /locus_tag="QF480_00770"
     CDS             1536..3305
                     /gene="rho"
                     /locus_tag="QF480_00770"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018452787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008186 - ATP-dependent activity, acting
                     on RNA [Evidence IEA];
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HJN05122.1"
                     /translation="MYDIVELNGKLVADIRQIAKECNIPKAEKMLKKDLIYKILDHQA
                     LNPSKEVLDAEKKNFVRKTRKRIPNPKKKNEPITSKEKEGNKSSNKAEKLDKKDNTVN
                     KNRQRTELTPIADENISTQIQNRSNSVKTDVKHKEERKHHHKNELNPSRKRKRIVEHD
                     KPEKVIHSENTKTETTKDELVEKGAKKENNKLDQTTDTKAISTDQPEKKQRPRYSFEF
                     EGIVEAEGVLEIMPDGYGFLRSSDYNYLNSPDDIYVSLSQIKLFGLKTGDTIEGQVRP
                     PKESEKYFPLIKVTKINGMLPQDVRDRVPFDFLTPLFPNERFTLTGHKGESISTRIMD
                     MFTPIGKGQRGLLVSQPKTGKTVLLKEIANAIAANHSEVYLIILLIDERPEEVTDMAR
                     SVNAEVVASTFDEPAEKHVKIANLILEKAKRLTECGHDVVILLDSITRLARAYNTVSP
                     ASGKVLSGGVEANALQKPKRFFGAARQIEDGGSLTILATALTDTGSKMDEVIFEEFKG
                     TGNMELQLDRKLSNKRIYPAIDIVASSTRREDLLVDKDMLQRIWILRNHLADMNPTEA
                     MIFLKDKIKFTATNQEFLISMNS"
     gene            complement(3337..4161)
                     /locus_tag="QF480_00775"
     CDS             complement(3337..4161)
                     /locus_tag="QF480_00775"
                     /inference="COORDINATES: protein motif:HMM:NF019242.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1573 domain-containing protein"
                     /protein_id="HJN05123.1"
                     /translation="MIQFRYLILLILFVTVNVVISQNITQDSLLKKNFPLVIGNIGFA
                     TDSMDVVIGNIPRGEIITFEMEIYNFGRDPVKFINGKSNNFVTQKFEPEILLPQMSGK
                     MIVEFNADIELDLGEFHAEISIISSDKRNPYKFLNLLVNIEEGIAGSKNQKLFDSVPH
                     MVFDHYNYDYGHLVRGKNLYHTFLISNDGSLPLYITEIDPPKGIKVVDRPTQPILADE
                     KAILRIKINTHGRVGIQHQSVLVHSNDPASPLVILGIHGSVRIFPNHKKTSVQCNE"
     gene            complement(4181..>4709)
                     /locus_tag="QF480_00780"
     CDS             complement(4181..>4709)
                     /locus_tag="QF480_00780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="peptidoglycan synthetase"
                     /protein_id="HJN05124.1"
                     /translation="NGARLVCNQLGIDDKDFFAAVSSFEGTANRLELVMKNGSNRLYK
                     DFAHAPSKVHATVEAVREQFPLMNFVACLELHTFSSLNKKFIAEYNHTLDASNHACVY
                     FNEHTLAMKRLPNLDIIDVVEAFKRDDLKVFVNSKDMMAWLNMIKKPNTVYLMMSSGN
                     FDGINFDNRAMQLLS"
BASE COUNT         1740 a          799 c          781 g         1389 t
ORIGIN      
        1 ccaaaaaagt taaaacacaa tttggagcaa aggctcttat ggtattaaag tatgagatct
       61 tcaaaaatgt ggattttagc actaagctgg aactcttttc taattatctt cataatccac
      121 aaaatataga cgttaattgg caagttaaca taactatgaa agttaattca tggctgaacg
      181 taaatatcaa cactgaatta atttatgatg atgatgtgat tttccacgat gcaaatggaa
      241 atccaatcgg accacgaaca caatttaatg aaaatatgca gatcggatta gctataactt
      301 tctaataatg aaatgtattg gccttatttc tgatacgcat ggatacattc atccacgaat
      361 gttttcattt tttagtaatt gtgatgaaat atggcacgct ggtgatattt gtaacacaga
      421 aactattgat aaactcagat cgtttaaacc tgtacgggct gtttatggaa acattgatga
      481 cggaaaaata aggcttgagt ataatgaata tgaggttttt actgttgatg gattaaaagt
      541 aatcttaatt catattggag gttaccctgg ccgatataca aagttagcat ggcaacttat
      601 caacaaacat aaacctggat tgtttatttc aggacattca catatattaa aagttatacc
      661 tgataagaaa aacaatctgc ttcatataaa tccgggagct tcaggaaatt caggccaaca
      721 taactttata acctttatta aattcagtat taacaatagt gaattaactg atctggagat
      781 atttgaagcc gtcaggtaat tcagtaatct gttaatacat cgaaattatc ttacctgtaa
      841 cgaccacatt atatttgtct agcgtaatct gtcggttgag cgcactaatt tttcatcatt
      901 cgttatacct cttgcagcca taaacagtaa cattgccgaa actaatggaa ttataaatat
      961 aactgttggt atttccattc ctgtttccag tatcggaaca ctatactgat aagaagcata
     1021 acccccactt tgattttcaa ggatatcaat ataatagaag aaatatactc ccaagtaaat
     1081 taataataga agaagcataa accgcactaa aatcagctga agctttcttt ttttatataa
     1141 gaagatagta acaattgaaa taattactat taatgtaacc gaaataagta acggtaaaat
     1201 aaaaaatgga gtaaacggag aactaaaacc aggaacaaga gtcttcacct ggtagagata
     1261 taatactaaa gaatcctttt ctccgataaa agaagacaag ggcacaaaat atgtgatgca
     1321 taataatgct gcggcaaaga acagataaat tgattgttta cgttgaatca tattttattc
     1381 atttttttac aaaaatagtc aattacataa aaaaattaat acctttgcag cacttttaag
     1441 ataaagtcaa agaaaattcc aaaactagaa tcaaaacttt tataattttt aattattcaa
     1501 ttattgtagt tgaataaata acaaaatccc aatctatgta cgatattgtc gagctcaacg
     1561 gtaaactcgt tgcagatata agacagatag ctaaggagtg taatattcct aaagctgaaa
     1621 aaatgctcaa gaaggacttg atctacaaga ttcttgatca ccaggcgctt aatccttcaa
     1681 aagaagtgtt ggacgctgag aagaaaaatt ttgtcagaaa aacaagaaaa aggattccca
     1741 atcctaaaaa gaaaaatgag ccaataacat ctaaggagaa agagggtaac aaaagttcta
     1801 ataaggctga gaaactggat aaaaaagata atacagtgaa taaaaatagg caacgtacag
     1861 aacttactcc aattgcggac gaaaatatct ctactcagat tcagaataga tcaaattcgg
     1921 ttaaaacaga tgttaagcat aaagaagagc gaaaacatca ccataagaat gaattaaatc
     1981 cctcaagaaa gcgtaaacga attgttgaac atgataaacc tgaaaaagtt atccactcag
     2041 aaaatactaa aacagaaact accaaggatg aattagttga aaagggagcg aaaaaagaga
     2101 ataacaaact tgaccaaact accgacacca aagctatttc aacggaccaa ccagaaaaaa
     2161 aacagagacc aagatattca tttgaatttg agggaattgt tgaagcagaa ggagtccttg
     2221 agattatgcc tgacggttat ggatttttaa gatcgtcaga ttataattat cttaattcac
     2281 ctgatgacat atatgtttca ctttcacaaa ttaagctatt tggattaaaa acaggtgata
     2341 caatagaagg ccaggtacga ccaccaaaag aaagtgagaa atactttccg ttaattaaag
     2401 taacaaaaat aaatggaatg ttgcctcagg atgttcgcga tagagttcct tttgattttt
     2461 taactccttt atttcctaat gaacgattta cgctgacagg acataaaggt gaatcaatat
     2521 caaccaggat aatggacatg tttactccga ttggtaaagg acaacgtgga ctacttgttt
     2581 cacagccaaa aacaggtaag acagtattac tcaaagaaat agctaatgct atcgcagcta
     2641 atcactcaga agtttatctt attattttgt tgatcgacga acgtccagaa gaggttaccg
     2701 atatggcgcg tagtgtaaat gcagaagttg tagcttcaac atttgacgaa cctgctgaaa
     2761 agcacgtgaa aatagcaaat ctaattctag aaaaggccaa gagacttaca gaatgtggac
     2821 acgatgttgt aatattactg gattctataa caaggttagc tagggcttat aatacagtct
     2881 cacctgcctc aggcaaagta ttgtcaggtg gtgttgaagc taacgccctt caaaaaccta
     2941 aacgattctt tggcgctgca cgtcaaattg aagatggggg ttcacttaca atacttgcaa
     3001 ctgcccttac cgacacagga tctaagatgg atgaggtgat ttttgaagaa tttaaaggaa
     3061 ctggtaacat ggagcttcaa ttggacagga agctttctaa caaaagaatt tatccagcta
     3121 ttgacattgt tgcatcaagt acccgacgtg aggatcttct tgtagataag gatatgctac
     3181 aaagaatttg gatattgaga aaccatctcg ctgacatgaa tcctaccgaa gcaatgatat
     3241 tccttaaaga taaaataaaa ttcacggcta ctaatcagga atttttaata tcaatgaata
     3301 gctagtaaaa attaacgaaa tacaactaac ctctgtttat tcattgcatt gaacagaggt
     3361 ttttttatgg ttaggaaaaa ttcgaactga gccatgaata cctaaaatta ctaatggact
     3421 agcaggatca ttagaatgta ccaacacaga ttgatgttga attccaaccc tgccatgagt
     3481 attaatcttt atgcgcaata tagctttttc atcggcaagt ataggctgag taggcctatc
     3541 aactactttt attccctttg gtggatcaat ttcagtaata tataaaggta acgaaccatc
     3601 atttgaaatc agaaaagtat gataaagatt cttgcctcgt acaagatgac cataatcata
     3661 attataatga tcgaaaacca tatgcgggac actatcaaat aacttttgat tcttgcttcc
     3721 agcaatgcct tcttcaatat taaccaatag attcaagaat ttgtatggat ttcttttgtc
     3781 gctgctaatg atggatattt cagcatgaaa ctcaccaaga tctagctcaa tatctgcatt
     3841 gaattcaacg atcatcttac cactcatttg tggcaacagt atttctggtt caaatttttg
     3901 agttacaaag ttattagatt ttccatttat aaatttcact ggatctctac caaaattata
     3961 tatttccatt tcaaaagtaa ttatctcacc acgtggtata ttaccaataa caacatccat
     4021 actgtcggtg gcaaatccaa tgttaccaat taccaaagga aaattcttct ttagtaaaga
     4081 atcctgagtg atgttctgtg atattaccac attaacagtc acaaacaaaa tcaataatat
     4141 tagatatcta aactgtatca tcctattgtc atacggagtt tcaagacaat agttgcattg
     4201 ctcgattatc gaagttaatt ccgtcaaaat taccagaact catcattaaa tatactgtat
     4261 ttggtttttt aatcatatta agccaagcca tcatatcttt cgaattaaca aatactttca
     4321 aatcatctct cttgaaagct tctaccacat caatgatatc aaggttaggc aaacgtttca
     4381 tggctaaagt atgctcatta aaatatacac atgcatgatt agatgcatca agtgtatggt
     4441 tatactcagc aataaacttt ttgtttaagc tgctaaaagt gtgcaattca agacatgcaa
     4501 caaaattcat aagtggaaat tgttcccgta cagcttcaac cgtagcatga acttttgaag
     4561 gtgcatgagc aaaatcttta tataatcggt tagaaccatt tttcataacc aattcaaggc
     4621 gattggcagt accctcaaaa ctacttactg ctgcaaagaa atccttatca tcaattccca
     4681 gctgattaca tacaagtctg gctccatta
//
LOCUS       DASCQP010000047         1693 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000162627, whole genome shotgun sequence.
ACCESSION   DASCQP010000047 DASCQP010000000
VERSION     DASCQP010000047.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1693)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1693)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1693
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000162627"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1066
                     /locus_tag="QF480_00785"
     CDS             <1..1066
                     /locus_tag="QF480_00785"
                     /inference="COORDINATES: protein motif:HMM:NF019310.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJN05125.1"
                     /translation="VGLLYSLEFITAALSSFIVAPKIGKIKRKNLAFIGAFIVILGNI
                     ISVWWSNYEFLLVIRPLTGIGAGLALACGNATIANAKHPDKVAGMMNVLFAAMLLLLM
                     LLLPLLSVSLGMQGVFLGLAAVTLIFLIMLIQMPQRAITSDSAISSTKTNNTVVFSIA
                     GIAIFAVFFMFTLRDSMAWGFAERIGIAVGYTTTEVGGLLSLQAFLGLVGPIIAAIIG
                     FKFGAKFPLLFGLVFAGLTTYAIFLSVNAPYLFEVAVLLWTASYFFAISYMTAYAATL
                     DGEGRIVAASGSALVLGVAVGPALSGYIIYYGGYAMGAGVTLALVFAMIIAALVSLKW
                     SANLKGSGRTDSKSSTNNNS"
     gene            1119..>1693
                     /locus_tag="QF480_00790"
     CDS             1119..>1693
                     /locus_tag="QF480_00790"
                     /inference="COORDINATES: protein motif:HMM:NF014615.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homocysteine S-methyltransferase family protein"
                     /protein_id="HJN05126.1"
                     /translation="MAKYRTHLPQLTESTFMTDGGLETTLIFKQGIDLPHFAAFNIIK
                     DEKGKKILEKYYQDYLSIAKQKCSGFILEAVTWRANTDWALKMGYNMESLDLINREAI
                     QHLESIRDNHENEDFQISISGCVGPRGDGYSIENSMSIGEAEEYHSRQIKTLSLTNAD
                     FITAMTINYNKEAIGIVKAANKNNIPVVISYT"
BASE COUNT          511 a          284 c          354 g          544 t
ORIGIN      
        1 tgtaggtctt ctgtatagct tagaatttat aactgcagcc ctatcatcat ttatagttgc
       61 tccaaaaatt ggaaagataa agcggaagaa tcttgcattc attggggcat ttattgttat
      121 tctaggtaat attatttcag tttggtggag taactatgaa ttcttattag tgattagacc
      181 attgacagga attggggcag ggttagcttt agcttgtgga aatgcaacaa ttgcaaatgc
      241 gaaacatcct gataaagtag ctggaatgat gaatgttctg tttgcagcga tgttacttct
      301 actcatgttg ttattaccat tattaagtgt ctctttgggc atgcagggtg tttttctagg
      361 actggcagct gtgacattga tttttcttat catgttgata caaatgcctc aacgagcaat
      421 cacgagcgat tctgccatta gctctactaa aacaaataat acggtggtct tcagtatagc
      481 tgggatagcc atatttgcag ttttctttat gtttacactt agagattcta tggcctgggg
      541 ctttgcagag agaataggaa ttgctgttgg ttatactact actgaagttg gaggattact
      601 ttcactgcag gcgttcttgg gtcttgtggg ccccataata gctgccatta ttggttttaa
      661 gtttggagca aaatttcctt tgttatttgg cttagtattc gcaggactca caacctatgc
      721 gatatttttg tccgttaacg caccttatct atttgaggtt gctgtattat tgtggactgc
      781 tagctacttt tttgctattt cttatatgac tgcttatgct gctactttgg atggtgaagg
      841 ccgtattgtg gctgcatcag gaagcgcact ggtgctagga gttgctgttg gaccagcatt
      901 atccggctac attatctatt atggtggata tgccatgggt gcaggagtaa cacttgcatt
      961 agtttttgcg atgataatag cagcacttgt ttcacttaaa tggagtgcga acctcaaggg
     1021 gagtggacga actgattcta aatcatccac taataacaat agttaaaagt aacttacaac
     1081 tcatttcacc ggattgaata acttaattaa aaaatactat ggcaaaatac agaacacact
     1141 taccacaact cactgaatct acgtttatga ctgatggtgg attagaaaca accctcatct
     1201 ttaagcaagg tattgactta cctcatttcg ctgcattcaa tataataaag gatgagaagg
     1261 ggaaaaaaat actagaaaaa tactatcaag actatctttc cattgcaaaa caaaaatgta
     1321 gtggattcat acttgaagcc gttacatgga gagccaatac cgattgggct ttaaaaatgg
     1381 ggtataacat ggaatcatta gatttaataa acagagaagc tattcaacac cttgaaagta
     1441 taagagataa tcacgagaat gaggattttc aaatatctat cagtggttgt gtggggcctc
     1501 gcggagatgg ctattccata gaaaacagca tgagtatagg agaagctgaa gaatatcatt
     1561 ctcgtcagat taaaacatta tccctaacca atgctgactt tataactgcc atgacaatta
     1621 attacaataa agaagctatt ggtattgtca aggctgctaa taaaaataat ataccggtcg
     1681 tgatttcata tac
//
LOCUS       DASCQP010000048         3243 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000166191, whole genome shotgun sequence.
ACCESSION   DASCQP010000048 DASCQP010000000
VERSION     DASCQP010000048.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3243)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3243)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3243
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000166191"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1151
                     /locus_tag="QF480_00795"
     CDS             <1..1151
                     /locus_tag="QF480_00795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05127.1"
                     /translation="DKRMMMQSFERDLTDEETITEQDSAIVLVTNPRDHAFYLQHIPR
                     TPEQLAISDSIIIEAYNLLAYLYFEDLQDTALALDTYITFQEKYPNNKYRIESWYALY
                     KIYSGKGDNNKADHYSNLIISNFPESNYAKVILDPDYFIKLRAQQNEAGILYNKTFKA
                     FNREQYYRVINYADQAIELYPEDTALIPKFMYLRAISLGAVDIADTLYSAMFNLVQKY
                     PTSSVAPLAKSVIQTLQIDYGIGIPEGLAAQSAGDSTNVKSIYKFSPNEMHMVLVVVQ
                     SDDINISALKVRISDFDKKYFSLKRLRIKSLMLDDIQTIITIGNFDNKEEAGNYLLAL
                     RNDEYVVSGLQNKDFLIFSIAASNYPVFYRDKDVSSYLKFFEINYKSN"
     gene            1236..1607
                     /locus_tag="QF480_00800"
     CDS             1236..1607
                     /locus_tag="QF480_00800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006842244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HJN05128.1"
                     /translation="MKKHKNGINDKQVPNIIALGTNIVGDIESEGDFRIEGSVKGKII
                     AKGRIVVGTSGNVDGEIICSDADIFGSVKGKLEVLNLTVLKATAIFSGDVTTKKISIE
                     PGAVFTGTCQMKSDTSPKDRK"
     gene            1787..2011
                     /locus_tag="QF480_00805"
     CDS             1787..2011
                     /locus_tag="QF480_00805"
                     /inference="COORDINATES: protein motif:HMM:NF021073.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AtpZ/AtpI family protein"
                     /protein_id="HJN05129.1"
                     /translation="MKQDNKESPLKFYAKYSSLALQMIVIILAGAFGGKALDAWLNWS
                     FPVFTLVLTLLSVAGAVFYAMRGLFKNNNN"
     gene            2100..2483
                     /locus_tag="QF480_00810"
     CDS             2100..2483
                     /locus_tag="QF480_00810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05130.1"
                     /translation="MKSKIAPFVVGFSYYSGIIFFLSLAVQLWIPDIEISNTWPFILL
                     FIYGFTLFAFTMLVKYIDTKLSHFANAFMLVNFGKLILFSIIIIVYAWLVRDDAISFT
                     VTFFVYYLMLTTYEIIALLKIPKGS"
     gene            2639..3112
                     /locus_tag="QF480_00815"
     CDS             2639..3112
                     /locus_tag="QF480_00815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05131.1"
                     /translation="MIVQSSFEDFLYIILGLVWIIFSFYKAKKKKKEKEAPSQSGEKK
                     SLVESLLNEMGLQDEEEEPHYVEPYQDTKKIEPEPNQVIDEKLEEVFSYDDYYEESNY
                     NSKDDVIERKPVLPIKNIDKAYKISEKSSSTRKVGKNINLRKAVIYSEILKKVYF"
BASE COUNT         1137 a          487 c          550 g         1069 t
ORIGIN      
        1 ctgataaacg aatgatgatg cagtcgtttg agagagattt aactgatgag gaaacaatta
       61 cagaacagga cagtgcaatt gttcttgtta ccaacccacg tgaccatgca ttctatcttc
      121 aacatatccc gcgtacccct gaacaattgg ctatatctga tagtataata atcgaagcat
      181 ataacttact agcttattta tatttcgaag atttacaaga cacagctctt gctctcgaca
      241 cttatatcac ttttcaagaa aaatacccca ataataaata caggattgag tcgtggtatg
      301 ccttatacaa aatatattcg ggtaaaggtg ataacaataa agcagaccat tacagcaatc
      361 ttatcataag taattttccg gaaagcaatt atgcaaaagt tatcctcgac ccagattatt
      421 ttattaaact tagagcccag caaaatgaag ctggcattct gtacaataaa acgtttaaag
      481 cattcaatcg cgagcaatat tacagggtga taaattatgc agatcaggct atcgagcttt
      541 atcctgaaga tactgccctc atcccaaaat ttatgtatct gcgggctatt tcattagggg
      601 cagttgatat tgctgataca ttatattcag caatgtttaa cctagtacaa aaatatccga
      661 caagctcggt tgcccctctg gcaaagtcgg ttatacaaac tttgcagatt gattacggta
      721 ttggcattcc tgaaggatta gctgctcaat cagcaggaga ttcaactaat gtaaaatcta
      781 tatataagtt tagtcctaac gagatgcaca tggttttggt tgttgttcag tcagatgata
      841 ttaacattag tgcactaaaa gttaggattt ctgattttga taaaaaatat ttcagtttaa
      901 aaaggttaag aattaaaagc ctgatgctcg acgatataca aactataatt actataggta
      961 atttcgacaa taaagaagaa gctggtaatt atttattagc tcttcgaaac gatgagtatg
     1021 ttgtatctgg attacaaaat aaagattttc tgatattttc gatagcagct tcaaattacc
     1081 cggtatttta tagggataaa gatgtatctt cgtacctcaa atttttcgag atcaattata
     1141 aatcaaatta agtagtttgt tatttgtgaa tctgtgcagc ttatttacct tgactaaata
     1201 ctaaaataat caaaaattaa caagataaaa ctattgtgaa aaaacataaa aacgggatta
     1261 acgataagca ggtcccaaac ataattgccc taggcacaaa cattgttggt gatattgaat
     1321 cagaaggaga ttttcggatc gagggttccg ttaaaggtaa aataatagcc aaaggacgaa
     1381 ttgtggtggg tacaagtggg aatgtagatg gtgaaattat atgcagtgat gctgatattt
     1441 tcggatcagt aaaaggaaaa ctagaagttc ttaatcttac tgttcttaag gcgactgcta
     1501 tcttttcggg tgatgttaca accaaaaaaa tttcaataga gcctggagca gtttttaccg
     1561 gcacttgtca aatgaaatct gatacctcac caaaggacag aaagtaagcg atacgctggt
     1621 gattaaaaat cagcaggaca ctaaggaaaa taaataaaac cgatgaaacg aactgaataa
     1681 atttaatcaa ttaattagtt aaagttattg attaaatttt tcatgagagt tcctgaatgt
     1741 gcagcaattt ttttgtaata ttcagcaaac aaaaaaatta aaaccgatga aacaggataa
     1801 taaagagagt cctctgaagt tttacgcgaa atactcttct cttgctttac agatgatcgt
     1861 tataatttta gctggagcat ttggaggtaa agctctcgat gcttggttaa attggagttt
     1921 tcctgtattt acattagtat taactctcct ttcagttgcc ggtgctgttt tttatgccat
     1981 gaggggtctc tttaaaaata ataataacta gtttcgatat tacgttgtta aaaggtatac
     2041 atttaaaact ttaaatttta ccttataact gtttaatttg acaagacaat ctatacatta
     2101 tgaaaagtaa aattgcacca tttgttgtgg gttttagtta ttattcgggt attatttttt
     2161 tcttaagtct tgcggttcaa ttatggatac ctgatattga gataagcaat acatggccct
     2221 ttatactatt atttatatat ggttttacct tatttgcttt cacaatgtta gtcaaatata
     2281 tcgacactaa attatcacat tttgcaaatg cttttatgct ggtgaatttt ggcaaactaa
     2341 ttcttttctc aataataatt atagtttacg cctggttagt tcgagacgac gctatttcat
     2401 ttactgttac cttttttgtt tattatttga tgttaaccac ttatgaaatt attgcgttgc
     2461 tcaaaattcc aaaaggatcc taatcagcca tcttccggtt aagtaatttc gcatcttatg
     2521 taatcttcat ccactggatt ttaaatttca ttttattatt acaattgtat agaataaatt
     2581 tatactttta tcaatcataa taacatacca ctaactatca gcattaatct gatatactat
     2641 gatagtacaa tcatcattcg aggacttttt atacattatc ttaggattag tttggataat
     2701 tttttctttc tataaagcca aaaagaagaa aaaagaaaaa gaagcaccaa gtcaatcggg
     2761 tgaaaaaaaa tcattggttg aatctttgct caacgaaatg gggcttcagg atgaagagga
     2821 agagccgcat tatgtggaac catatcaaga tacaaaaaag attgaacctg agccgaatca
     2881 ggttatagac gagaagctcg aggaagtttt ttcatacgat gattattatg aagaaagcaa
     2941 ctataattca aaagatgatg tcattgaaag aaagcctgta ctgccaatca agaatattga
     3001 taaggcttat aaaatttccg aaaaatcttc ttcaacaagg aaggtcggaa aaaatatcaa
     3061 tttaagaaaa gctgttatct attctgagat tttgaaaaaa gtctattttt gaaatgttaa
     3121 gaaaagttaa aataattttg tttggtataa tcaaatattg ttaaatttac cgacttttaa
     3181 agtaaatagt caaagaataa agtttaatat aaatttgctg gtatgttaaa aaatttactc
     3241 ctt
//
LOCUS       DASCQP010000049         5600 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000170964, whole genome shotgun sequence.
ACCESSION   DASCQP010000049 DASCQP010000000
VERSION     DASCQP010000049.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 5600)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5600)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5600
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000170964"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..289)
                     /locus_tag="QF480_00820"
     CDS             complement(<1..289)
                     /locus_tag="QF480_00820"
                     /inference="COORDINATES: protein motif:HMM:NF015534.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Type 1 glutamine amidotransferase-like
                     domain-containing protein"
                     /protein_id="HJN05132.1"
                     /translation="MQTIILASSGEFIASTNIDNFLPKPLSESRILYITTASKKVNDN
                     SYVEKTRQKINALSFSYTELDIVGKAEEELKKALSLCDIVYVEGGNTFYLLK"
     gene            complement(385..783)
                     /locus_tag="QF480_00825"
     CDS             complement(385..783)
                     /locus_tag="QF480_00825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05133.1"
                     /translation="MTHELAHCLRFKDTEDEYSNDSQASAFEDIIKYEIIPRGELENE
                     LNQAEIYGASEEEIMSLKKLLESTDGDKIKKPIHYPNNRVEAFTFSQQFRYLKENGVA
                     RDDIKRMLSEHYDEEDFQFFDRLLDEIFKP"
     gene            complement(853..1254)
                     /locus_tag="QF480_00830"
     CDS             complement(853..1254)
                     /locus_tag="QF480_00830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05134.1"
                     /translation="MVNTSGKSPEAEIPEVQHAPTSSATNVDPATLKTEGVADRRAEQ
                     VARQDEMKNAARVRASLQRPMRIKNLKQHLIEYWGLEDVKEIERVQFVETCNLPPQHQ
                     KGYDFLNDNRLAGTMIAVVPDDMWIKGDQPS"
     gene            complement(1559..1717)
                     /locus_tag="QF480_00835"
     CDS             complement(1559..1717)
                     /locus_tag="QF480_00835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05135.1"
                     /translation="MALQFTDLGLIVQANELAIQYRNGQMTMRECARKIEELISGGTR
                     KEVLQTLK"
     gene            complement(1950..3281)
                     /locus_tag="QF480_00840"
     CDS             complement(1950..3281)
                     /locus_tag="QF480_00840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05136.1"
                     /translation="MLYRSARYPEERATYFFRDVDAGNYSVWVDYGKYTNITYIKTYL
                     ALGMPITVNDGSQDQIHHINLKQHWESHWGAPPNVKPFLTTDETQAWKDSWVRVGNGT
                     IAVSQGNTVTVSFSNTGNTGTSHPMLGHVKIVLEEGGGGEGGPCASNADCNFEECCNI
                     DSGQCGTCQEEVDHVLLYLDADGDGTVTGMEAYSRRHELMQNIGGNASVYDLNSDGVV
                     SQMDYNLTNTYINDDANLQKEVSILEYLDSNRDVVFDEVEGQARALIAAVSVGAQIPG
                     ADFNFDGISDQNDVRLAINYISEVDLLAHDYNHPFKMLDMDESNAVEIYEVIYGITAV
                     HSALQNGGYDSSADYDGNGVNTPLDINRVINYIGRPENAGLKRNMNTFIYLDTDRDMQ
                     ISTTEIRNGLANIMRALENGSNGPDPTGDGLTTPADVRAIATYLSAVGSNY"
     gene            3914..>5600
                     /locus_tag="QF480_00845"
     CDS             3914..>5600
                     /locus_tag="QF480_00845"
                     /inference="COORDINATES: protein motif:HMM:NF025432.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4256 domain-containing protein"
                     /protein_id="HJN05137.1"
                     /translation="MPNIIPDSQNITDDQPPLSPSPELESYAKEQEEGIKFLKGKYKD
                     LHNSPEAVSSAKRKELRTGEKVPQKPEAQIANYLSRFREILDRKDEGKRQRGIEALRK
                     IMHRQHVIKPENIPQGYWNSQAEIIINQGRKADLQEGGVHEKKYTDTKGNERINYIFP
                     EELRSQNIEVIIADQKSTMDNWLNYLSSHDAEAYPDWAKYWSFRSMLGLSTYDKEKKH
                     FAKRRKDTVAPFPDLNREALAYVVDIITKKAEGKQIDIAEDNTELQKLIQKENFAKLY
                     AHAIESVTPTEQTERGKIAGEWITYKQGSDHIPLVKSLQGHGTGWCTAGESTAKAQLE
                     NGDFHVYYSYDQDGKPSIPRIAIRMEKDQITEVRGVAAEQNLDPYVADVANKKLGEFP
                     DGDIYQKKAGDMKRLTELEKKHKARKDLAPEELRFLYELEDQIQGFGYKEDPRVAEIR
                     GGRDIEKDSKIIDVLDELKIRFNTQPEHYRRPKDIDFNKVKSALKVNPALMQKLALME
                     ITGGKPDIIGETEAEYIFGDCSLQSPSWRRNMNWLQSYEMSKRFGCQLMDKDTY"
BASE COUNT         1599 a         1173 c         1126 g         1702 t
ORIGIN      
        1 cctttagcag ataaaacgtg tttccgccct caacatatac tatatcgcac aaactaagtg
       61 ccttttttaa ttcttcctcg gctttgccta cgatatcaag ctcagtatag gagaagctca
      121 acgcattaat tttttgccgc gtcttttcga cgtagctatt atcgttcact ttttttgatg
      181 ctgtagtaat gtaaagaatc ctagactcgc ttaaaggttt aggcaaaaag ttatctatat
      241 tagtggaggc gatgaactct ccactggatg caaggataat tgtttgcata gtattagaat
      301 aaaatttatt tcacaaaacg tgttgtaggt tgtagaaata agttagtcct taatgtagag
      361 ctattttagg cagttcacaa caggttatgg tttaaatatt tcatccaaca gcctgtcaaa
      421 aaattgaaaa tcttcttcat cgtaatgttc actcagcatt cttttaatat catctctggc
      481 aacaccgttt tcctttaaat atctgaattg ttgcgaaaaa gtaaatgctt caactctgtt
      541 gtttggatag tgaatgggct ttttaatttt atctccatct gttgattcaa gtagtttttt
      601 caaactcata atttcttctt cactggctcc atatatttcg gcctggttaa gctcattttc
      661 taattctcca cgtggaatga tttcatattt tataatatcc tcaaatgcag atgcttgtga
      721 atcattagaa tattcatcct ctgtatcctt aaagcgtaaa caatgtgcaa gttcatgtgt
      781 catccagcct atgtcgtcag cgcccttgta attactttct ttaaatagta ttagatcatg
      841 tatagcattt gattaggaag gctggtcgcc tttgatccac atatcatcag gtacaactgc
      901 tatcatagtg ccagctaatc tattgtcatt taaaaaatca tacccttttt gatgctgtgg
      961 tggtaaatta catgtttcta caaattggac tctttcaatt tctttaacat cttccaagcc
     1021 ccagtattca attaaatgtt gttttagatt ttttatcctc ataggtcttt gtaggcttgc
     1081 acgcacccga gcagcatttt tcatttcatc ttgtcgagca acttgttcag ctcgccgatc
     1141 tgctacacct tcagttttta atgtagcagg atcaacgttt gttgcagatg atgttggggc
     1201 atgctgcact tcaggtattt cagcttccgg tgatttgcca gatgtattta ccatattttc
     1261 aatttcttaa tcttattatt atatcataaa attactcttt attcaatttt ttgactgccc
     1321 aaaatagctc atcaaataga tgcaaactta ttgctatttc ctacaacgtt tgcgtatatg
     1381 cgcctgtcgg ccgtagcccc gaaggggcgg aggctggaag ttgccgccgg aggtggcaat
     1441 ttgggagagg tggatttggc agtccgatat tcatcaaatt agccaagccc accgaaccgc
     1501 atataccgtg ttatgtgatg ctttcaaact tttgcaacca aagtgctgat tctctttctc
     1561 atttgagagt ttgaagaact tcttttctag taccgccaga aattaattct tcaatttttc
     1621 ttgcacattc tctcatggtc atttgtccat ttctatattg tattgccaat tcgttcgctt
     1681 gaactattaa tccgagatca gtaaattgaa gagccatgtg ttgaagtata ctaccttctt
     1741 catttcttgc taatgcaaaa gtttgaaaat ttcacataaa gtttcattct tgacaagaag
     1801 tccctaacaa ttttcaaatc tgcttgaatc tcgaagaaag ttggcattcc agagccatcc
     1861 aatcgcagat tattatctgt tcttccgatt ggtacttaca aaaagagcca gacgtatgcc
     1921 tgactctttt ttgcttgttt tgtgtgcttt caataattgc ttcctacagc gctcaaatag
     1981 gtggcaattg cccgcacatc tgcaggagtg gttaggccgt caccagttgg atcgggtcca
     2041 ttactaccat tttcgagtgc tctcataata ttcgcgagac cattgcgaat ttccgtagtg
     2101 gaaatctgca tgtcgcgatc agtatccagg tagatgaacg tattcatatt cctttttagc
     2161 cctgcgtttt cgggtcttcc tatgtaattt ataactctat tgatatcaag aggagtattt
     2221 actccattcc catcatagtc ggcacttgag tcatatcctc cgttctgcaa tgcagaatgg
     2281 acagcggtta tgccatatat gacttcataa atttccactg cattactttc atccatatcg
     2341 agcattttaa agggatgatt gtaatcgtgt gcaagcaagt ccacttctga gatgtagttg
     2401 atggcgaggc gaacatcatt ttgatcagag ataccatcaa aattaaagtc tgcccccgga
     2461 atctgagcgc ctacgctgac tgcagcaata agtgcccgtg cctgtccttc tacttcgtca
     2521 aataccacat cacgattcga atccaggtat tccagaatgc tcacttcctt ttggagattt
     2581 gcatcatcat taatgtaggt attggtcaga ttataatcca tctgacttac aactccatca
     2641 ctatttagat catatacaga cgcattcccg ccgatatttt gcatgagttc gtgtctgcga
     2701 ctgtaggctt ccattcccgt gactgtgcca tcaccatctg catcgaggta gagcaacaca
     2761 tgatctactt cttcctgaca agtaccacat tggccagagt cgatattaca gcactcttca
     2821 aagttacagt ctgcattgct ggcacatggt ccaccttccc cgccccctcc ctcttccaat
     2881 acaatcttca cgtgtccaag cataggatgt gatgttccag tatttcctgt gttggagaag
     2941 cttactgtta cggtgtttcc ctggcttacg gcaattgttc cgtttccaac acgtacccat
     3001 gagtctttcc atgcctgggt ttcgtctgtt gtgagaaatg gttttacatt aggaggggct
     3061 ccccagtgag attcccaatg ttgcttgaga ttaatatgat gtatctgatc ctgagatcca
     3121 tcgtttacgg tgatgggcat acccaatgcg agataggttt tgatgtatgt tatatttgta
     3181 tacttgccat agtctaccca tacgctgtaa ttgcctgcat caacatcgcg gaagaagtac
     3241 gtagctctct cttccggata tctagcggaa cgatagagca tgtcattcca gggcctaaat
     3301 gaataaccat tcgtttcgac gtagtgatcg tcagtgattg tgcgatctgt agtgtgcact
     3361 atgcgttcgt tggcatcgcc cggtgaactc tggctaccta tgctataaat tgatgcggag
     3421 agagggagtg atccttgtgt gcttacaaga atgagtaccg cacctatgat tgctccacca
     3481 atggcagcaa aaataagatt tttcggtgtt cccttgagga tgtttttcat atgtgtgttt
     3541 gttaaaaagg atgttgctac cattatagcg taatacgata tttttatcaa atgtaaatca
     3601 tacgttcctc aggtccaacg gcagagacta tgagaagttt tggcatgcta aaattagcac
     3661 gaagtgctta ccatgccaaa atttgggtga acgaacgaag caaagcggag tgagtgaacc
     3721 tcatagtctt tgttgtacgc aaaacaccac tttctcattt tatcccagga agaaaccttc
     3781 ttaattcttt gtatatcaac taaactaaat accatgtttt aaacaagata aactctctta
     3841 agattaattt tactaaaaac cccttaaatc aaatcttaat ctatgctata atataaagat
     3901 taaaaaacaa aatatgccga atattatacc tgatagtcaa aatattacag atgatcaacc
     3961 accacttagc ccatcgcctg agctggaaag ctatgcaaaa gagcaggagg aaggcataaa
     4021 gttcctcaag ggtaaatata aggatctcca taatagtccg gaggctgttt cctctgccaa
     4081 acgcaaggag ctcaggacag gagaaaaagt accccaaaaa cctgaggctc aaatagctaa
     4141 ctatctcagt cgtttccgtg aaatcctcga ccgcaaggat gaaggaaaac gtcagagagg
     4201 tattgaggca ctacgcaaga tcatgcaccg ccagcatgtc atcaaaccag aaaatattcc
     4261 gcagggttat tggaatagcc aggcagaaat catcatcaat cagggtcgta aagctgatct
     4321 acaggaaggt ggcgtgcatg agaaaaaata cacggacaca aagggtaacg aacgaattaa
     4381 ctatattttt cctgaagaat tgaggagtca aaatatagaa gttattatcg ccgaccaaaa
     4441 gtccaccatg gacaactggc tgaactattt gtcttcgcat gatgcagaag cttatcctga
     4501 ttgggccaaa tactggtcct tccgcagtat gctgggactt tctacttacg acaaggaaaa
     4561 gaagcatttt gccaaacgtc gtaaagacac cgtggctcct tttccggatc ttaaccgaga
     4621 ggcacttgct tatgtggtgg atatcatcac taagaaggcc gagggtaagc agatcgacat
     4681 agctgaggat aatactgagc tccagaagct catccagaag gaaaactttg ccaagctcta
     4741 cgcgcatgcc atagaaagcg ttacccctac ggaacaaacg gaacggggaa aaatcgctgg
     4801 tgagtggatt acttataaac aaggttcaga ccacattcca ctggttaaat cgctgcaagg
     4861 tcacggaacc ggttggtgca ccgccggtga atctaccgca aaagcccagc tagaaaacgg
     4921 tgattttcat gtttattact cttacgacca ggatgggaaa ccgtccattc cacgtatcgc
     4981 cattcgcatg gaaaaagatc agattactga agtccgtggg gtagctgcgg agcagaacct
     5041 tgatccttat gtggctgatg ttgccaataa aaaacttgga gaattccccg atggagatat
     5101 ctaccaaaag aaggccggtg acatgaagcg actgactgaa cttgagaaga aacataaggc
     5161 taggaaagac ttggcgcctg aggagctaag attcctttat gaactagaag atcagattca
     5221 gggctttggt tataaggagg acccacgggt ggctgaaata agaggtggaa gagatattga
     5281 aaaggattca aaaattattg atgtgctcga tgaactgaaa atacgattca atactcagcc
     5341 agagcattat cgaagaccaa aagacattga tttcaataaa gttaagtctg cccttaaggt
     5401 aaatccagca cttatgcaga agctcgctct gatggaaatt actggtggaa aacctgatat
     5461 tatcggggaa acagaagctg aatatatttt tggtgattgc tctttgcaat ctccatcgtg
     5521 gcgtcgaaat atgaattggt tacaatctta tgaaatgtcc aagcgctttg ggtgtcagtt
     5581 gatggataaa gatacttaca
//
LOCUS       DASCQP010000050         1512 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000188939, whole genome shotgun sequence.
ACCESSION   DASCQP010000050 DASCQP010000000
VERSION     DASCQP010000050.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1512)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1512)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1512
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000188939"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1124
                     /locus_tag="QF480_00850"
     CDS             <1..1124
                     /locus_tag="QF480_00850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009860126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PhoU domain-containing protein"
                     /protein_id="HJN05138.1"
                     /translation="TMALTLVMCYNGLIPFELAAAMVLGENIGTTITANIAAVVANVS
                     AKRTARAHLIFNMFGVLWMLAVFHYFLLGIDYFLQQRHGVSILKTNLSKSDFESVHSI
                     YPIGLAIFHTSFNVLNTLFLIGFAPLIAKVATKMVPDKGEDDEEFRLKFINTGLFSTS
                     ELAIIQALKEISDFGTRIEKMFTFIQSLMVEENSKKNYKLLARVEKYEEITDNIELEI
                     AIYLTKVSEGEISHESSKKIRAMLKIIDDMESVADAIYQLSKVIENLKQSNSNFTEHQ
                     NHAIMEMLGLVHEAFIEMNHNLNNNFSDMDIKNAYAIEKKINDRRNLLRQKHVEDLKE
                     KRYKHKTGAFYTDMISINERIGDYIINVSEAIKEYQEVN"
     gene            complement(1164..1415)
                     /locus_tag="QF480_00855"
     CDS             complement(1164..1415)
                     /locus_tag="QF480_00855"
                     /inference="COORDINATES: protein motif:HMM:NF012964.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004325 - ferrochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0006783 - heme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HJN05139.1"
                     /translation="MFEDIQITPFTDEVVMDLAKNGSKRLLVISPAFVADCLETNHEL
                     GKELKERFEQNGGEELTLVESLNDLPQWVEALAGMVREL"
BASE COUNT          509 a          243 c          265 g          495 t
ORIGIN      
        1 caactatggc cctaacgctt gttatgtgtt acaatggtct tattcctttt gagcttgccg
       61 ctgcaatggt actgggtgag aatattggaa ctactattac ggcaaatatt gcagctgttg
      121 tagctaatgt atcagcaaaa cgaactgctc gagctcattt aatttttaat atgttcgggg
      181 tattgtggat gctagcggtt tttcattatt ttttgttagg aattgattat tttctgcaac
      241 aacggcatgg cgtatccata ctaaaaacca atctttcaaa aagcgatttc gaaagtgttc
      301 atagcattta tcctatagga ttggcaattt ttcataccag ttttaatgtt cttaatactc
      361 tattcttaat aggattcgct cctttaattg ctaaagttgc aacaaaaatg gtacctgata
      421 aaggcgagga tgatgaagaa ttcagattaa aatttatcaa cacaggttta ttttccacga
      481 gcgaattagc aattattcag gctttgaaag agatttcaga cttcggaaca agaatagaaa
      541 agatgttcac attcatacag agtttgatgg ttgaagaaaa ctcaaagaaa aattataaat
      601 tactagctag agttgagaag tacgaagaaa ttacagataa cattgaattg gaaatcgcca
      661 tctaccttac gaaagtttct gaaggggaaa tcagccatga aagttcaaaa aagataaggg
      721 caatgcttaa aattattgat gatatggaaa gtgtggcgga tgctatttac caattatcaa
      781 aagttattga aaatttaaag caaagcaatt cgaatttcac tgaacaccag aatcacgcaa
      841 ttatggaaat gctaggttta gtgcatgagg catttattga aatgaaccat aaccttaata
      901 ataatttcag tgatatggat atcaagaatg cttatgctat tgagaaaaag attaatgacc
      961 gaagaaatct acttcgccaa aagcatgttg aggatttaaa agaaaaaaga tacaagcata
     1021 aaacaggtgc tttttatact gatatgatct ctataaatga aaggattggt gattatatta
     1081 tcaatgttag tgaggctatt aaagaatatc aggaagtaaa ttaagctgac aaaaaacctt
     1141 tcgccaagtt atctgcttta ttgtcacaac tctctcacca ttccagccaa agcctcaacc
     1201 cattgtggta ggtcattcag actttcaact aatgtaagtt cttctccacc attttgctca
     1261 aacctctctt ttaactcttt acctaattca tgattggttt ctaaacagtc agccacaaat
     1321 gccgggctaa taactagtaa tcgcttactg ccattttttg ccagatccat cactacttca
     1381 tcagtgaaag gtgttatctg tatgtcttca aacaaacttg aacttttagg gtcaaaaatt
     1441 aagagagtgt taatacaaaa ctaattgttt tttttgatat tgtttttttc tttcatttag
     1501 cgttttattt tt
//
LOCUS       DASCQP010000051         1768 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000196529, whole genome shotgun sequence.
ACCESSION   DASCQP010000051 DASCQP010000000
VERSION     DASCQP010000051.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1768)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1768)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1768
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000196529"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(132..473)
                     /locus_tag="QF480_00860"
     CDS             complement(132..473)
                     /locus_tag="QF480_00860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05140.1"
                     /translation="MRFIIILALVVSFNFSIKGQGCSDAGLCTISGLDSGFGISEKQT
                     TGSFTTIFGLGEQNVFHLTTQLELVIPTFRNQIVQIKMPYNFTFGNLGNISGLGDLSL
                     SLNQRIFSQDV"
     gene            563..1309
                     /gene="recO"
                     /locus_tag="QF480_00865"
     CDS             563..1309
                     /gene="recO"
                     /locus_tag="QF480_00865"
                     /inference="COORDINATES: protein motif:HMM:TIGR00613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HJN05141.1"
                     /translation="MLLKTKGIVIKQTKFSDSGVIVKIFTEELGIQSFFVRGLRSRKS
                     NRSTGGSKSKAAMYQPLTMLNLVVSYSENKSLHHINEVSIWYPYQSITENMIKRTLLI
                     FINELLHKSLKEETANKDLFNWIHQALLWLDLADDGFVNFHLVFMMQLSMFLGFYPKK
                     ELNENLSVLDMQEGRFSNKRPNHPYYVTGETAKILCQIRDTKFEDSFELKLNNKNRRV
                     VLETLISYYKLHLPSFGEFKSLEVLSVVLA"
     gene            complement(1344..>1768)
                     /locus_tag="QF480_00870"
     CDS             complement(1344..>1768)
                     /locus_tag="QF480_00870"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN05142.1"
                     /translation="PHSSSINYKTEDGIRKLTYSFGWGDCIAGCIHWKHWNIKVYNDC
                     SVELVGHDPDYTYVSDFNKIETINLSPNPFNDLIVIETKNNYNYDIISLTGITLIKGE
                     LFVGENIIETNDLPGGVYVIYIYDSKSYSTYVIIKRDF"
BASE COUNT          590 a          285 c          284 g          609 t
ORIGIN      
        1 ttccttttta aatcactaat tagtgaagtt gcacttttct tcctagccat tttctttact
       61 ttttaagatt aataaaatta taaaatatat atcttaaatt tgactcgtga aaagttcact
      121 ttttgctgaa actatacatc ttgtgaaaat attctttgat ttaacgacaa acttaaatca
      181 cctaaaccac taatattccc caggttgcca aatgtaaaat tgtaaggcat ctttatttga
      241 acaatttggt ttctaaaagt tggaataact aattcaagct gtgttgttaa gtgaaataca
      301 ttctgttcac caagcccaaa gatcgtagta aaactacctg ttgtttgttt ttctgatatg
      361 ccaaaacccg aatctaatcc tgaaattgtg caaagtccag catcactaca gccttgtcct
      421 ttaatggaga aattgaaact aacaacaagt gctaatatta ttatgaagcg catgaattgt
      481 ttttattatt tgtcgcaata aatgattatc cttacaatat ttggaccaag attaaatatc
      541 tttgtatttt acaattgtag ttatgctcct caaaacgaaa ggtattgtaa taaagcaaac
      601 taagttctcc gattcaggtg ttattgtaaa aatatttact gaagagcttg gtatacagtc
      661 tttttttgtg agaggattac ggagccgtaa atctaaccgt tctacaggtg gatcaaaaag
      721 taaggcagca atgtatcagc cactaactat gcttaatttg gttgtgtcat actccgaaaa
      781 caaatcgttg catcatatca atgaagtgtc gatatggtat ccctaccaat cgattactga
      841 gaatatgatt aagcgaacct tattaatttt tattaatgaa ctgttacaca agtcgttaaa
      901 agaagaaact gcgaacaaag accttttcaa ttggattcat caggccctat tatggcttga
      961 tcttgcggat gatggatttg ttaatttcca tttagttttt atgatgcagc tttcaatgtt
     1021 cttgggtttt tatccgaaaa aggaattgaa tgaaaaccta agtgtactgg atatgcagga
     1081 aggtcgtttt agtaataaaa ggccaaacca tccttattat gttaccggag aaacagctaa
     1141 aattctatgc cagattcgag acacaaaatt tgaggattcg tttgagctaa aactaaacaa
     1201 taaaaacagg agagtagtat tagaaacgct gatcagttat tacaaacttc atctgccttc
     1261 atttggtgag tttaagtcgt tggaggtatt gtcggttgta ttggcctgat gagtaacacg
     1321 ggataaatga agattattga tagctaaaaa tcccttttta ttataacgta agtgctatat
     1381 gattttgaat catatatgta aataacataa acacctcctg gcaggtcatt tgtctcaata
     1441 atattttctc ccacaaaaag ttctccttta attagggtta tacctgttaa actaattata
     1501 tcataattgt aattattttt tgtctcaata acaattaaat cattaaatgg atttggggat
     1561 aaattaatgg tttctatttt gttgaaatca gaaacataag tataatcagg atcatgacca
     1621 actaactcaa ctgaacaatc gttgtaaacc tttatattcc aatgtttcca atgtatacac
     1681 cctgctatac aatcacccca tccaaacgaa tacgtgagtt ttcgaatacc atcttcagtt
     1741 ttgtaattaa tgcttgatga atgtggtg
//
LOCUS       DASCQP010000052         1914 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000196531, whole genome shotgun sequence.
ACCESSION   DASCQP010000052 DASCQP010000000
VERSION     DASCQP010000052.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1914)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1914)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1914
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000196531"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            308..1414
                     /locus_tag="QF480_00875"
     CDS             308..1414
                     /locus_tag="QF480_00875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05143.1"
                     /translation="MKRINLLGIVILTLFVASCTNKGLNEKQVEDFVNVHFAERVNGA
                     EAVEPFINDFNDSIYVMFANYPPRYWDPKNIDSTSFVEDSAVSEVYSVDIYGNNASVF
                     GKASMYLDGVEIDDFQFHAIISKMKDKLYWKRFYWVNSNSMADNYMYPSTTSGDDSEG
                     YWKMRDAMLNMRINEGVRLSDSLVAADPNWASAHLGQLHAYIVNDNKEGLNNTLKVIE
                     SKLDGASTAEKLTISAYNPSLTSQERQNILSEALAYANDDMMLMFWYGFTISDPDTQI
                     EFYKKALKRYPISGPLNNIMGYAYMNNGNMDLAGKHFAIYLAFHSDEPNAYDSMGDYL
                     AKLGDKDNARDMYLTAAKMDAEFAKMSTAKAEAL"
     gene            1693..1821
                     /locus_tag="QF480_00880"
     CDS             1693..1821
                     /locus_tag="QF480_00880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05144.1"
                     /translation="MENIKLYIEYVSNVVEAVGVITIFVGIICIVSAKSELFTSQI"
BASE COUNT          718 a          266 c          312 g          618 t
ORIGIN      
        1 tatttatctg agcaaataca tacttacctt gattcataac cttagagata aaaacctcaa
       61 aggtcagtga attcaaatca aaaaatcaaa gaacgcttgt aattaattaa aacaaagtta
      121 tttatactaa atttgtaaat cttaacgcaa cactagtgat atctacttat aaaatactac
      181 aacctaataa ctagcaaatg ataaatcatc gataactata ttgtggagtg cagaaaccac
      241 tttaaaaaac gtcgcgatat ccgaaaagcg ttacgactag gaaaatagta ttaaaacacc
      301 aaaaaaaatg aaaagaatta acttattagg aattgtaatt ttaactttat ttgttgctag
      361 ctgcacaaac aaagggttaa acgaaaaaca agtggaagat tttgttaatg ttcactttgc
      421 agaacgagta aatggggcag aagccgttga accatttatt aatgatttta acgactcaat
      481 atatgtcatg tttgcaaatt atccacctag atattgggat cctaaaaata ttgatagcac
      541 tagctttgtg gaagattcag ctgtgtcaga ggtttactct gttgacatat atggtaataa
      601 tgcaagtgta tttggtaagg catcaatgta tttagatgga gttgaaatag atgactttca
      661 gtttcatgca attatttcaa aaatgaagga taaactttac tggaaaagat tttactgggt
      721 taactcgaat tcaatggcag ataattatat gtatccatct accacatctg gagatgattc
      781 ggaaggttac tggaaaatgc gtgatgcaat gctaaatatg cgtattaatg agggagttag
      841 gttgtccgat tctctagttg ctgctgaccc taattgggca tcagctcatc ttggacagtt
      901 acatgcttat atagtaaatg ataataaaga gggcttaaat aatactttga aagttattga
      961 aagtaaactt gatggtgctt caacagcaga aaaactcaca atatctgctt ataacccttc
     1021 tcttacttct caagaaaggc agaacatact ctcagaggct cttgcctatg caaatgatga
     1081 catgatgtta atgttttggt atggatttac catatcagat cctgatacac aaattgaatt
     1141 ctataaaaaa gctcttaaaa gatatcctat cagtgggccc ttaaataaca ttatgggtta
     1201 cgcatacatg aataacggta acatggatct agctggaaaa cattttgcaa tctatttagc
     1261 ttttcatagc gatgaaccta atgcttatga ttcaatgggt gattaccttg caaaattagg
     1321 cgataaagat aatgcaagag atatgtacct tactgcagca aaaatggatg cagaatttgc
     1381 aaaaatgtca acagccaagg ctgaagctct ttaagacaac cattttataa taaatttaca
     1441 tttaggtact acaatatttc ctatttacac ttataatatt aagtgtaaat aggtttttat
     1501 ctataatatg actaatctaa tggtatattg ctgtaaactt tttatatttt tacatatttt
     1561 acgttcctaa atataataaa acaaataaaa ttttaggtat aaaactgtta gaaatagcct
     1621 aacaaacaag atggtgattt tttaaaaata ttttatactc ggttttttta aattaaacac
     1681 aaaaaattaa ttatggagaa tatcaaactt tatattgaat atgtatcaaa tgtagtcgaa
     1741 gcagttggtg taataacaat attcgtaggt attatttgta tagtttcagc aaaaagtgaa
     1801 cttttcacga gtcaaattta agatatatat tttataattt tattaatctt aaaaagtaaa
     1861 gaaaatggct aggaagaaaa gtgcaacttc actaattagt gatttaaaaa ggaa
//
LOCUS       DASCQP010000053         2560 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000196650, whole genome shotgun sequence.
ACCESSION   DASCQP010000053 DASCQP010000000
VERSION     DASCQP010000053.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2560)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2560)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2560
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000196650"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..2244
                     /locus_tag="QF480_00885"
     CDS             <1..2244
                     /locus_tag="QF480_00885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009036958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HJN05145.1"
                     /translation="QLDAVLKTEGPVMVIAGAGSGKTRELTYRIAYLLSKGIDPFNIL
                     ALTFTNKAAREMKDRVIELIGDGDARNVWMGTFHSVFAKILRIDGHHLGYPSNYTIYD
                     STDSKRLIKNIIGEMKLDIKQYSPAYVANRISMAKSSLISTTDYSNDPDILAADESSR
                     KPLIKDIYSSYQARLRRADAMDFDDLLFNTYLLFSGFPKVLYKYQQKFKYILVDEYQD
                     TNHAQYIILKKLAANTEYICVVGDDAQSIYGFRGANISNILNFKSDYPDFQLFKLEQN
                     YRSTKTIVNAANKVITYNKDQIKKTVWTDNHSGDLIGFIKATSDNDEGNLVANSIFEK
                     KMNHQLTNNMFSVLYRTNAQSRSIEEALRQKNIPYRIYGGLSFYSRKEIKDLLAYFRL
                     VINQNDEGALQRIINMPARGIGKTTMEKMIVAADNHNINIWEVISNPNGYGIKINAGT
                     QTKLNNFSTMIKSFIVENKTKDAFEIAVHIANSSGLLKLHRDEDTPEGISRVENIEEL
                     LNGIKEFTEKAIEKSEGDLSIKKSLDEFMEDVALLTDADSDDDEDKDKVTLMTIHASK
                     GLEFPHVYIVGLEENLFPSIQSINTRSELEEERRLFYVALTRAMKTVTLSYAETRYRW
                     GNFTITEPSRFLDEVDENLIDKPSPFNFNTRKEVPSSSTNQGNRTTITKRKLKPITNS
                     GSSYSDNFAEANELEEGMNVEHANFGTGKVLAVEGNGPNKKATVYFKSVGNKNLLLRF
                     AKLKIIS"
BASE COUNT          933 a          402 c          456 g          769 t
ORIGIN      
        1 caacttgatg ccgttctaaa aactgaaggc cctgtaatgg taatagctgg agctggttca
       61 ggaaaaacca gagagctaac ttatcgtatt gcatatctcc tatctaaagg aattgaccca
      121 tttaatatac tcgcacttac ttttacaaat aaggctgctc gtgaaatgaa ggaccgagtt
      181 attgaattaa ttggtgatgg cgacgccaga aatgtttgga tgggaacttt tcattcagtt
      241 tttgccaaaa tccttcggat tgacggtcat catcttggtt atccttccaa ctacacaatt
      301 tacgatagta cagatagtaa acggctgata aaaaacatta tcggcgagat gaaattagac
      361 attaagcaat attcaccggc atatgttgct aatcgtatat caatggcaaa atcgtctctt
      421 atttccacaa cagattattc taatgatcct gatattctag ctgctgatga aagttcacgc
      481 aaacctttaa ttaaggatat ttactctagc tatcaagccc gacttaggcg tgctgatgca
      541 atggattttg acgatctgct ctttaatact tatctgcttt tttcaggatt tccaaaagtg
      601 ctttataagt accagcaaaa gtttaaatat atacttgttg atgagtatca agatactaat
      661 catgcacaat acatcatttt aaaaaaattg gcagcaaata ctgagtatat atgtgttgta
      721 ggtgatgatg ctcaaagtat ttatggtttt agaggagcaa acattagtaa tatattaaac
      781 tttaagagtg attatcctga tttccagctt tttaaacttg agcaaaatta tcgctcaaca
      841 aaaacaattg taaatgctgc caacaaagtt attacctata ataaggatca aatcaaaaaa
      901 actgtatgga cagataatca ttctggtgat ctgataggtt ttattaaagc cactagcgat
      961 aatgatgaag ggaatttagt agccaactct atttttgaaa aaaagatgaa tcaccagtta
     1021 acaaataata tgttttcggt gttatacaga acaaatgcac aatcaagatc aattgaggaa
     1081 gcacttcgtc aaaaaaatat tccatataga atttatggtg gactttcgtt ttatagcaga
     1141 aaagaaataa aagatcttct tgcatatttt cgacttgtaa ttaaccaaaa tgatgaggga
     1201 gctctacaac gtattattaa tatgcctgcc cgaggaattg gaaaaactac tatggaaaag
     1261 atgattgtgg cagccgacaa tcacaacatt aacatttggg aggttataag caaccccaac
     1321 ggatatggaa taaagataaa tgcaggaacc caaacaaagc tgaataattt cagcaccatg
     1381 ataaaaagtt ttattgtaga gaataaaaca aaagatgctt ttgagatcgc agttcatata
     1441 gctaactcat cgggattact taaattgcac agagatgaag atactcctga aggaattagc
     1501 cgtgtagaaa atatcgaaga acttcttaac ggcattaaag aatttaccga aaaggccatt
     1561 gagaaaagtg aaggtgattt atcgatcaag aaaagtctgg acgaatttat ggaagatgta
     1621 gcattactta ctgatgccga tagtgatgat gatgaggata aagataaagt tacacttatg
     1681 actatccatg cttctaaagg tcttgaattt ccgcatgttt atattgtagg cttggaagag
     1741 aacctatttc cctccattca atccattaac acacgtagtg agcttgagga agaaaggagg
     1801 cttttttatg tggccttaac acgcgctatg aaaactgtaa ccttgtcata tgctgaaacc
     1861 agataccgat ggggtaactt tactattacc gaaccaagta ggtttttaga tgaagttgat
     1921 gaaaatttaa ttgataaacc tagcccattt aatttcaata caagaaaaga agtaccttca
     1981 tcaagtacaa atcaaggcaa tcgaactact attacaaaaa gaaaactcaa accaattact
     2041 aatagtggta gcagttattc agacaatttt gctgaagcca atgaattaga ggaaggtatg
     2101 aatgttgaac atgctaattt tggcactgga aaagtactag cagtagaagg taacgggcct
     2161 aataaaaaag cgacggtata tttcaaaagt gtcggcaaca aaaatctatt acttcgtttt
     2221 gctaaactta aaatcatttc gtagtacctc aataattatt caataatttt tctagagagg
     2281 aattatattt gagttatagg tttatctgca attggttttc caaataatat cttttactac
     2341 ttttacacaa aattgaattc acagtagaga tcaatagaat aataaaatgt taatgacaaa
     2401 taaaaattct aacaaatgaa tgaatgcaat agtgcagtca atataataat tgtaacaaag
     2461 aaaggaaaac atcatgaaat ttaaaaagtt aaattggttt attgttattg gaatcttatc
     2521 cataggagcc atattctaca gtactacgtt aatcttcgca
//
LOCUS       DASCQP010000054         2425 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000201623, whole genome shotgun sequence.
ACCESSION   DASCQP010000054 DASCQP010000000
VERSION     DASCQP010000054.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2425)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2425)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2425
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000201623"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..315)
                     /locus_tag="QF480_00890"
     CDS             complement(<1..315)
                     /locus_tag="QF480_00890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HJN05146.1"
                     /translation="MKKTPIPSDIVKEKIKLSGLRSVGTASIRQIKILVDEIEKTTGE
                     KFIRMEMGIPGLPPVEVGIQGQIAALKDGVASIYPDIQGIPELKAEISRFVKLFMNID
                     VGV"
     gene            complement(369..1091)
                     /locus_tag="QF480_00895"
     CDS             complement(369..1091)
                     /locus_tag="QF480_00895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009120927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mpv17/PMP22 family protein"
                     /protein_id="HJN05147.1"
                     /translation="MKKIDIIFFAGVVLLFLPFVISKEVFDFYIQFNKDHELITAFIK
                     FAILATIGDVIGLRIKTGNYLRKGFGIIPRMIVWGFLGVTIKIAFVLFASGTPAFLES
                     IGLENAQLIMKDNFSPEKLLVAFCISFALNVIYAPVMMTFHAITDMHIVNNGGTLKGF
                     FTPIKFRKLFVDLDWDVQWNFVFKKTIPFFWIPAHTITFLLPAELRVLFAALLGIALG
                     TILAIADLMGKNAKSLNYKLKY"
     gene            complement(1128..>2425)
                     /locus_tag="QF480_00900"
     CDS             complement(1128..>2425)
                     /locus_tag="QF480_00900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013612657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="acetate--CoA ligase family protein"
                     /protein_id="HJN05148.1"
                     /translation="SSHTGALASSDVAVDALFRKAGIVRCYGREDLISVASVFMYPKL
                     SGKNIAVITHAGGPAVMLTDALSVGGLVVPHISGKDAESLKEKLFPGSSVSNPIDFLA
                     TGTTEQLGIIIDYVNEKFNNIDAMVVIFGTPGLVEIFDVYELLEKKISTSKKPIYPVM
                     PSVLTTKNEIGAFVAGGGVYFPDEVTLGNALVRINNTPKPSSISPIEIKIDHIKIRNI
                     IDNSDDGYLPPDLVQKLLVAAGIKRANELIVSSDDVVESAAEKIGFPLVMKVVGPVHK
                     SDIGGVSLNIKDISTVFSEMRRMLEIDGAKGVLLQPMLSGIELFAGVKKEDKFGHLIM
                     FGLGGIFIEVTKDVRAVLTPVSETEVLEEIKKLKGYSIIKGTRGMDPIDEEKFVDIIV
                     RLSSLVKVAPEIIEMDINPLLGNKNEVVAVDARIHISRS"
BASE COUNT          769 a          517 c          349 g          790 t
ORIGIN      
        1 cactccaaca tcaatattca taaagagttt aacaaatctg gatatttcgg cctttagctc
       61 cggaataccc tgtatatcag gatatatgga tgcaacacca tctttcagtg cagctatttg
      121 accctgtata ccaacttcaa caggtggcaa acccggaatt cccatttcca ttctgataaa
      181 cttttcacca gttgtttttt ctatttcatc aacaaggatt tttatttgac ggatcgacgc
      241 agttccaaca gatcgtagtc cacttaattt tatcttctcc ttaactatat cagaaggaat
      301 aggtgtcttt ttcatttttt gtatctatac tttattaaac ctttcagatc ggaatgaatc
      361 tgaaaagttt agtattttaa tttataattt aaactctttg cattctttcc catcaaatca
      421 gcaatggcaa gtattgttcc taaagctata ccaagtaatg ctgcaaataa tacccttaat
      481 tcggcaggca gcaaaaatgt tattgtgtgt gccggtatcc agaaaaacgg tattgttttt
      541 ttaaaaacaa aattccactg aacatcccag tccaaatcta caaataattt cctaaatttt
      601 attggagtga agaatccttt caaagtgccg ccgttgttaa caatatgcat atcagtaata
      661 gcatgaaaag tcatcataac cggagcataa atcacgttca aggcaaagct gatgcaaaat
      721 gcaactaaaa gtttttcagg actaaaattg tctttcatta tcaattgtgc attttccaaa
      781 ccaatagatt caagaaaagc cggtgtgcct gaagcaaata atacaaatgc tattttgatt
      841 gttactccaa gaaatcccca cactatcatt cggggtatta ttccaaaacc ttttcttagg
      901 tagttccctg tttttattct caaaccaatt acatcgccaa tggttgcaag tatggcaaac
      961 tttataaaag ccgtaattaa ttcgtgatct ttattaaact gaatgtagaa atcaaagacc
     1021 tccttactga taacaaacgg taggaacagg agtactactc ctgcaaaaaa tataatatca
     1081 atctttttta tcattcctag tggttagttt gctatttctt ataatcttta acttctcgaa
     1141 atatgtatcc ttgcgtctac ggcaacaact tcgtttttat tacccagcag aggatttatg
     1201 tccatctcaa ttatctcggg agccaccttc acgagagagg ataaacggac aattatatca
     1261 acaaacttct cttcgtctat cggatccatt cctcttgtac ctttaattat actataaccc
     1321 ttgagttttt taatttcttc caatacttca gtttcactaa ctggtgttag tactgcccta
     1381 acatctttag ttacttcaat aaatattccg ccaagtccga acatgatcaa atgcccaaat
     1441 ttatcttcct tttttactcc ggcaaatagc tcaatacctg ataacattgg ctgtaacaaa
     1501 actcctttag caccatcaat ttccagcata cgtctcattt cactaaatac tgttgagata
     1561 tcctttatat ttagagaaac acctccaata tctgatttat gaacaggtcc gacaactttc
     1621 attacaagtg gaaaaccaat cttttcagca gcactttcga caacatcatc agaagataca
     1681 atcagttcat ttgctctttt aatccctgca gcaaccaaaa gtttctgaac taggtctggt
     1741 ggcaggtaac catcatcaga gttatcaata atgtttctga tcttgatgtg atcaatctta
     1801 atttctatag gcgatattga cgatggtttc ggagtattat taatcctaac taatgcatta
     1861 ccaagtgtta cttcatcagg aaaataaaca ccgcctcctg ctacaaaagc accaatctcg
     1921 tttttagttg ttaacacgga tggcataacg ggataaattg gtttttttga tgtacttatc
     1981 tttttttcca gaagctcata aacatcaaaa atctcaacca atccaggtgt accgaatatc
     2041 actaccattg catcgatatt attgaatttt tcattaacat aatcaattat gatccctaat
     2101 tgctcagtag tgccagtagc taaaaaatct ataggattcg agactgaaga gccggggaac
     2161 agcttttcct ttaaactctc cgcatcttta ccactgatat gaggtacaac taatccccca
     2221 actgataacg catcagttag cataactgcc ggaccgcctg catgtgttat aacagcaata
     2281 ttttttcctg ataacttagg atacataaaa acagatgcca cacttattaa atcttcacgt
     2341 ccgtaacatc ttacaatacc agcctttcta aataaagcat caactgctac atcagaactt
     2401 gcaagtgctc ctgtatgtga tgaag
//
LOCUS       DASCQP010000055         2463 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000201847, whole genome shotgun sequence.
ACCESSION   DASCQP010000055 DASCQP010000000
VERSION     DASCQP010000055.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2463)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2463)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2463
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000201847"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(110..394)
                     /locus_tag="QF480_00905"
     CDS             complement(110..394)
                     /locus_tag="QF480_00905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05149.1"
                     /translation="MRTHIKFIKTALVIIAIGVWIIVLQNAGILPQISPQVVVADSAM
                     RVMGEVDVNNTVFVKGAVDVNIESINGYSKFYKDPRTGEYYVIPVTDTYE"
     gene            complement(705..2222)
                     /locus_tag="QF480_00910"
     CDS             complement(705..2222)
                     /locus_tag="QF480_00910"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014425.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HJN05150.1"
                     /translation="MKTIRNNLQYIFFALSTLLVYLFFDYHNILFFRPQSIHFIRQTD
                     CLSFVATYFNGEMHFFEPRILNLNSVDGKAVGEFPILYYLTALLYKIFGEHEFFLRLI
                     NLSIITTGLLFLYKLLIKLLDDIAYALIFTFLFFSSAILIYYTNNYLPDPAALGFTLI
                     AWYFYYEFLVKRNKTKAFIISLIFFTLASLIKVSYGLNPAAALLSLIIIKVIGNQKYS
                     IKKNYPYLLSFLFSFLIIIGWYLFIIKYNETNNGNYFLTHYQPIWSLKKVQIDEVWNY
                     MYYYWLPNYYYESTLHVFGWMIIIGLIFIKTSNKIILTIATSTFIGSSIYFVLFFLQF
                     KEHDYYFLALIPGIIFLVINAFISIRNRFPIIFGNLIFKLALLLLLILSLNYANKKVS
                     GRYSIKNDKFANIGTQLDNANEYIINIGISKDSKLIVVQDYTPNGSLYFLNRTGWTIS
                     DTAAIELIRIHTYIQKGASYLVLTDKNYLKNSTIRSLAKNVVGEYNGAVFYSLNK"
BASE COUNT          887 a          349 c          379 g          848 t
ORIGIN      
        1 cataaatagg tatttaacaa taattaagta gctatagtta attgagttaa aactggattt
       61 tgcgaacaag gttatatatg aatttatata cagaaaataa taacggaaat tattcgtaag
      121 tatcagtaac agggattaca taatattcac cagtgcgagg atctttataa aacttactgt
      181 aaccgtttat actttcaata ttaacatcaa cagctccttt aacaaataca gtgttgttaa
      241 catctacttc gcccataacc cgcatggctg agtcggccac aacaacctga ggtgatattt
      301 gtggtaggat accagcattt tggagtacta ttatccatac tcctatagca attatcacga
      361 gagcagtttt tataaatttt atatgagttc tcatttaata aatatttagc tccttgaatt
      421 cctgccccgt aaaagaccac tttgaaggtt caaaaaatca actgtttcgt aatattacaa
      481 aagtatcaat ttatttagta cgttcaaaaa tatttaattt gattggttca aacaactctt
      541 tcaattaaaa tgatagttga aaagtaattg ttatagatgt atgtatatgt agaaaagatc
      601 taatcaaagc cctatcaacc aaattcatta attttctctg gatgtcgcaa tgagatgatt
      661 catagcttat taaaaactga tatcatgaaa aactatgcgg caaattattt attcaaacta
      721 taaaaaacag ctccattata ttcaccaaca acattctttg ctaggcttct aattgtagag
      781 tttttaagat agtttttgtc ggtaagtact aaatatgaag ctcctttttg aatataagta
      841 tgtattctta ttagctcaat ggcagcagtg tcggatatag tccatcctgt tctgttgaga
      901 aaataaagac tgccatttgg tgtataatcc tgtactacaa ttaattttga atctttactt
      961 attccaatat ttataatgta ctcattggca ttgtctaatt gtgttccaat atttgcgaat
     1021 ttgtcattct taatactata tcgtccagat acttttttat ttgcataatt aagacttagt
     1081 attagaagta aaagtaatgc caatttaaaa atcaggtttc cgaaaataat tgggaaccgg
     1141 ttgcgaatag aaataaatgc gtttatcaca agaaaaataa ttccaggaat tagagcaaga
     1201 aaataatagt cgtgttcttt aaattgtaaa aagaaaagaa caaagtaaat tgagcttcct
     1261 ataaaagtac ttgtggcaat agttaagatt attttatttg atgtttttat aaatattaga
     1321 ccaatgataa tcatccatcc gaaaacatga agagtgcttt cataatagta attaggaagc
     1381 caatagtagt acatgtaatt ccaaacttca tcaatttgca ctttttttaa agaccagatt
     1441 ggttgataat gagtcagaaa ataatttcca ttgttggttt cattatactt aataatgaat
     1501 aaataccatc cgataattat tagaaatgaa aacaagaatg aaagtaaata agggtaattc
     1561 ttttttattg aatatttctg attaccaatt actttgataa taatgagcga caataaagca
     1621 gctgcaggat ttaatccata agatactttt atcaaagatg caagtgtaaa aaatattaaa
     1681 ctaataataa atgctttggt tttatttctc tttactaaaa actcataata aaagtaccat
     1741 gcaataagag taaagcctaa tgctgccgga tcaggaagat aattgtttgt ataataaatc
     1801 agaattgctg aagagaaaaa taaaaaagtg aagatcaagg cgtatgcaat atcgtcgagt
     1861 aattttatta ataatttata aagaaacagc agtcctgttg taataatgga aaggtttatg
     1921 agtcgtaaaa aaaactcgtg ttcgccaaat attttgtaaa gtaatgctgt taaataataa
     1981 agtatgggga attcaccaac tgcctttcca tcaacgctat ttaaatttaa aattcgaggt
     2041 tcgaaaaagt gcatttcccc attaaaataa gttgctacaa aggacaaaca atctgtttgt
     2101 cggatgaaat gaattgattg aggtctgaaa aacaggatgt tatggtaatc aaaaaataga
     2161 taaactagca aagtcgataa agcaaagaat atatattgca ggttgtttct aatcgttttc
     2221 aaaattattt tattgattcg tgatttgaat ggaaaccata cgagtttatg tagacattat
     2281 ctaatgatct attctgtttg gagttctttt atctgagcca aagtaggtga tatatctatt
     2341 tggttttctt cctcattttt acaacttcct tcacccttag atcttttaca tgtgcatcct
     2401 agtttatcac ccgtttttgg gtcgatagtt gcgcattgtt ttttaaattc accacctttc
     2461 ttg
//
LOCUS       DASCQP010000056         2117 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000208942, whole genome shotgun sequence.
ACCESSION   DASCQP010000056 DASCQP010000000
VERSION     DASCQP010000056.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2117)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2117)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2117
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000208942"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..214
                     /locus_tag="QF480_00915"
     CDS             <1..214
                     /locus_tag="QF480_00915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HJN05151.1"
                     /translation="TSLPDFLRWTSYKFHNKSFNQIPNGILYLKGGEIQKELNEIRKV
                     KKKIYNISDYFKDDYFETKKLVHIYR"
     gene            390..1829
                     /locus_tag="QF480_00920"
     CDS             390..1829
                     /locus_tag="QF480_00920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005838636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJN05152.1"
                     /translation="MTEEIKKSLRDNVGVRWFVLVLVSLCMLIAYTFMEVLSPLQTLI
                     QSTYGWSGSEWGIVTGAQGYLNVFAFMLIFAGIVLDKMGIRFTAVSSGIVMILGAIIK
                     YWAFAGNFAIGTEIIGIDSRVFVSAAGFAIFCVGAEGAGITVSRIIVKWFKGKEMALA
                     MGTEMALARFGSFIALFGAPRIANAIDIPTSVLVGTIALCIALILFIVYTIMDSRLDK
                     QLQDSAVEEDPFHLSDLKLIITSRGFWYIAILCLLFYSAVFPFYKFSSGLMVNKFGVD
                     PGTAGDIPSILPFGTMLLTPLFGYVYDKIGKGATIMIIGAVLLVVVHTIFYIPSLTET
                     WTAILAVVLLGIAFSLVPSAMWPSVPKIIPDKQLGSAYALIFYVQNIGLMLVPILLGV
                     VLDKTNPGINEKTDAAIQAFRDSGVPANEIADKVQELRTIGEIPMFDYANTWLIFVGL
                     TILAVVFGFLLKAEDKKKGYGLELPNIQK"
     gene            1849..>2117
                     /locus_tag="QF480_00925"
     CDS             1849..>2117
                     /locus_tag="QF480_00925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013445361.1"
                     /note="catalyzes the hydrolysis of Xaa-His dipeptides;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytosol nonspecific dipeptidase"
                     /protein_id="HJN05153.1"
                     /translation="MSKDILKLKPEAVWKSFYELTQIPRPSKKEEKVREFLKKFGENL
                     GLETIVDEIGNVIIKKPATEGMEDRKGIILQGHMDMVPQKNSDTD"
BASE COUNT          703 a          312 c          401 g          701 t
ORIGIN      
        1 aacatctctg cctgatttct tacgatggac ctcttataaa tttcacaaca aatcattcaa
       61 tcaaattcca aatggtattc tgtatttaaa gggtggagaa attcagaaag aattaaatga
      121 aataaggaag gttaagaaaa agatttataa tatttctgac tattttaaag acgattattt
      181 tgaaaccaag aaacttgttc atatttacag ataagatatt acggatacta ccaatagcac
      241 atctaactat ttacatttgg taaccatcaa aaaccgcagt cgcgaaatat ttaaaattaa
      301 ttcaagatcc atattctctt attaatttat ttataactct tcttaaacaa tttatcttaa
      361 tttcgcctgt tcatataaaa acttagaaaa tgacagaaga aattaaaaag tctttgagag
      421 ataatgtcgg agtaagatgg tttgttctgg tattagtttc cttatgtatg ttaatagcat
      481 atacatttat ggaagtacta tcacctcttc aaactttgat acaaagtact tatggttgga
      541 gtggttcaga atggggaatt gtaactggtg cccagggcta tttaaatgtt tttgcattta
      601 tgttaatttt tgcaggaatc gttttggata agatggggat aagattcaca gctgtaagtt
      661 caggaattgt gatgattctg ggcgctatta ttaaatactg ggcatttgct ggtaattttg
      721 caattggaac ggaaataatt ggtattgatt ccagagtttt tgtatcagca gcaggctttg
      781 caatattctg tgttggagca gaaggagctg ggataacggt ttcaagaatt attgtaaagt
      841 ggtttaaagg taaagaaatg gctcttgcca tgggtacaga aatggcgtta gcgcgttttg
      901 ggtcttttat tgctctcttt ggagcacctc gtattgcaaa tgcaattgat attccaacgt
      961 cagtattggt aggtacaatt gccctttgta tagcattaat tcttttcatc gtatacacaa
     1021 taatggattc taggctagac aagcagttac aagatagtgc agtcgaagaa gatccattcc
     1081 atttatccga ccttaaactt attatcacaa gtagaggatt ctggtatatt gcaattttat
     1141 gcttgctgtt ttactcagca gttttcccat tctataaatt ttcatctggg ttaatggtaa
     1201 ataaattcgg agttgaccct ggtacagctg gagatatacc atcaattcta ccttttggca
     1261 caatgttatt aacaccattg tttggttatg tatatgataa aattggaaaa ggtgcaacta
     1321 ttatgataat tggagctgta cttctggtag ttgtgcatac aatcttttat attccatcac
     1381 ttacagaaac atggacagca atcttagctg ttgttttgtt aggaattgca ttttctctgg
     1441 ttccatcagc aatgtggcct tcagttccta aaattatccc tgataaacaa ttgggttctg
     1501 cttatgcatt aattttctac gttcaaaata ttgggttgat gcttgttccg attctattag
     1561 gagttgtact tgataaaaca aatccgggaa ttaatgaaaa aactgatgca gcaattcaag
     1621 ctttcagaga tagtggagtt cctgcaaatg agattgcaga taaagtacaa gaattaagaa
     1681 ctatcggtga aattcccatg tttgattatg caaatacatg gttaatattt gtagggctta
     1741 caattttagc ggtagtattt ggatttttgc ttaaagctga agacaagaaa aaagggtatg
     1801 gacttgaact tcctaatatt cagaaataat caataaaaca aaaatataat gagtaaagac
     1861 atattaaaac ttaaaccgga agctgtttgg aaaagcttct atgaacttac acaaatacca
     1921 cgcccatcca aaaaagaaga aaaagttaga gaattcttga aaaaatttgg ggagaatctc
     1981 ggccttgaaa ctattgtcga tgaaattgga aatgtaatta tcaaaaagcc tgctactgaa
     2041 ggcatggaag atcgtaaagg tataatatta cagggccaca tggatatggt tccacagaaa
     2101 aattcagata ccgatca
//
LOCUS       DASCQP010000057         2893 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000215187, whole genome shotgun sequence.
ACCESSION   DASCQP010000057 DASCQP010000000
VERSION     DASCQP010000057.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2893)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2893)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2893
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000215187"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(130..2352)
                     /locus_tag="QF480_00930"
     CDS             complement(130..2352)
                     /locus_tag="QF480_00930"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN05154.1"
                     /translation="MIKNINQYMMFQGIRLLIILTFVPTFTFAQLHFVRYDSILVTDA
                     SLPLTNAWAGGFNSPQFSEIDLNGDGIKDLFAFERNWYGVVKTFINSGTTDQVDYKHD
                     ARYQHKFPVMHNWTLLADYNCDGKKDIFTSVPAGVALYRNESGPVPGLKFTLVSPLLL
                     SETSLGLTYLYVSPPDIPAITDVDGDGDMDILSFDVLGNAMMFHKNMSIEKYGNCNSL
                     EFELQSSCWGYFSESSMDNSITLFDTCSENSSREIKGNRHAGSASLALDLTGNGLLDL
                     LLGDISFNNLVRLNNEGTKNIASMTSQDTMFPSYSTPVNLTVFPAAFHLDVNNDNKQD
                     LIISPNNPNTSENFNNILYYKNAGTDLVPIFEFQDNDFLQGEMIDVGEGARPVFFDAN
                     SDGLLDIIIGNFGYFVSSGNFDSKLALLLNTGTLTDPSFDMVDRDYADLSSFNINSVY
                     PTFGDMDADGDKDMIIGNEDGQLHYFVNNADTGSPAEFSLSKPVYMNIDVGETAMPQI
                     VDVNRDGKLDMIVGERSGTIDYFENIGTPTEALFTSSPTNDFFGAVDVLLECCSGYSA
                     PFLTNDSVGNYVLYVGSEQGFLYQYNNIDGNLNGSFNIVDSLFLSGLNITISGADLNN
                     DGNTELIYGEYAGGITVLKKGIPSYIGIRETNTDNINVDVFPNPAKSVVYLQLRGKPY
                     YENVNVQILNFLGQVISTHQFTYSGSEMKIDLEGTSPGIYLTRIRTNGFVCTKKLIIK
                     "
     gene            complement(2349..>2893)
                     /locus_tag="QF480_00935"
     CDS             complement(2349..>2893)
                     /locus_tag="QF480_00935"
                     /EC_number="1.11.1.5"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome c peroxidase"
                     /protein_id="HJN05155.1"
                     /translation="HEIDSMLVVKAIAQFERTIISSNSKWDKYLRGEVSLSQTEAKGF
                     EIFFTEKGDCFHCHTTILFTDNLFHNNGLDSIFNDEGLSNITNNPNDQGKFKTPTLRN
                     IEFTAPYMHDGRFTTLEEVIDFYSEGIVWSSTIDPLMKKVSQGGVHLNEEEKNNLIAF
                     VKTLTDTTFVNNSDYSNPFK"
BASE COUNT          940 a          534 c          505 g          914 t
ORIGIN      
        1 gattgctatt actgagcaag aagcatcgat taaaatagga gagaatctta aagctggtgt
       61 ttattatgta agattagtga acggtacctc tgtaatcaag cctgttttaa tacaaaagtt
      121 gtagaagaat tacttgataa tcaatttctt tgtgcaaacg aagccgtttg ttcgaattcg
      181 tgtgaggtat attccaggtg aagtaccttc aagatcaatc ttcatttcgc tacctgaata
      241 agtaaattga tgtgttgaaa taacttgacc taaaaagttt aagatttgaa cgttaacatt
      301 ttcataatag ggtttaccac gtaattgaag ataaacgaca gacttggctg ggttagggaa
      361 gacgtctacg ttgatattat cagtgtttgt ttcccttatt ccaatataac taggaattcc
      421 tttctttaga actgtaattc ctccagcata ttcaccataa ataagttcgg tattaccatc
      481 gttattcagg tcggcacctg aaattgtaat atttaaacct gataagaaaa gagaatcgac
      541 tatattaaaa ctcccattaa gattaccatc aatattattg tactgataaa gaaacccttg
      601 ttctgaacca acatacagca cgtaatttcc tactgaatca tttgttaaaa agggtgcgct
      661 atatcccgag caacattcca gtaatacatc aactgcccca aagaaatcat tagtaggcga
      721 acttgtaaac aatgcttctg tgggtgttcc aatattctca aagtagtcaa ttgtaccact
      781 tctttctcca actatcatat ctagttttcc atcgcggtta acatcaacaa tttgaggcat
      841 agccgtttcg ccaacatcaa tattcatata aacaggctta cttaaagaaa attcagcagg
      901 tgatcctgta tcagcattat ttacaaagta gtgtagttga ccatcttcat taccaataat
      961 catatcctta tcaccatcag catccatatc gccgaaggtt gggtaaacac tgttaatatt
     1021 gaaagatgaa aggtctgcat agtcccggtc aaccatgtca aaagaaggat ctgttaaagt
     1081 accggtatta agaagtaggg ccagcttgct atcgaagtta ccggatgaca caaaataccc
     1141 gaagttacca attatgatat cgagtaagcc atctgaatta gcgtcaaaga aaacaggcct
     1201 ggcgccttct ccaacgtcta tcatttcgcc ttgtaaaaaa tcattatcct gaaactcaaa
     1261 aatcggaacc aaatccgttc ctgcattttt atagtacaat atattgttaa agttttcaga
     1321 tgtattagga ttgtttgggc tgatgatcaa atcttgttta ttgtcattat ttacatctaa
     1381 atgaaatgca gccggaaata cggtaaggtt tacaggtgtt gagtaagaag gaaacattgt
     1441 atcttgactt gtcatgcttg ctatattttt ggtgccttcg ttattgagtc ttaccagatt
     1501 attaaatgaa atatcaccaa gtaataaatc tagtagtcca tttccagtca gatcaagtgc
     1561 taaagaagct gaacctgcgt gccgattacc cttaatttct ctggaagaat tttcggagca
     1621 agtatcaaat agcgttatac tgttatccat tgaactttca gaaaaataac cccagcaact
     1681 agattgtagt tcgaactcaa ggctattgca attgccatat ttttcaattg acatattctt
     1741 atggaacatc atagcattac caagcacatc gaaagaaaga atatccatat ccccatcccc
     1801 atcaacatct gtaatggcag ggatatccgg aggactaaca tagaggtagg tcagaccaag
     1861 agaagtttcc gatagcaata atggcgaaac caatgtaaat tttaaacctg gaacgggacc
     1921 agattcattc ctgtacaagg ctactccagc aggtacactt gtaaaaatat cctttttccc
     1981 atcgcaatta tagtcggcca aaagtgtcca gttatgcatt acaggaaatt tgtgttgata
     2041 tctggcatcg tgcttataat caacctgatc agtagttcct gaattgataa aagtttttac
     2101 cactccatac caattacgtt caaatgcaaa tagatcttta atgccatctc cgttaagatc
     2161 gatttcagaa aactgcggac tattaaatcc tccggcccag gcatttgtta atgggaggct
     2221 tgcatctgtt acaagaatcg aatcgtagcg gacaaaatgc agttgtgcaa aagtaaatgt
     2281 tggtacgaac gtcagtataa ttaacaatct aataccctga aacatcatat attgatttat
     2341 gtttttaatc atttaaaagg attagagtaa tccgaattat ttacaaaagt agtatctgta
     2401 agcgttttaa cgaaggcaat caggttattt ttttcttctt catttagatg aacccctcct
     2461 tgacttactt ttttcatcag aggatcaata gtcgaagacc aaactattcc ttcactatag
     2521 aaatcaatta cctcttcaag agttgtaaac ctgccgtcgt gcatatatgg tgcggtgaat
     2581 tcaatgtttc gtagagtagg agttttgaat ttgccttgat cgtttggatt gtttgtgata
     2641 tttgaaagtc cttcatcatt aaaaatagaa tctaatccat tattatgaaa aaggttatca
     2701 gtaaacaaaa tggtagtatg gcaatgaaaa caatctcctt tttcagtgaa gaaaatctca
     2761 aatccttttg cttctgtttg cgaaagagaa acttctcctc ttaaatattt gtcccatttt
     2821 gaatttgaag agattatggt acgttcaaat tgtgcaatag ccttaactac tagcattgag
     2881 tctatttcat ggg
//
LOCUS       DASCQP010000058         1853 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000217065, whole genome shotgun sequence.
ACCESSION   DASCQP010000058 DASCQP010000000
VERSION     DASCQP010000058.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1853)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1853)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1853
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000217065"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1029
                     /locus_tag="QF480_00940"
     CDS             <1..1029
                     /locus_tag="QF480_00940"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HJN05156.1"
                     /translation="SFRLTITTTTVRRIHAGKIGFNTVVIGSNGNAVKVYNDITSQEL
                     SSGNKFIGFVNVHDHGYFKIEQYLPHLGAYKGLNKIIIDYQVEEVILAIERLEIDTIE
                     RIITELETTNVLIKVIPLMQDIIFGSVKVSGIFHTPLIEISPDLMPVWQQSIKRVIDI
                     IVSLFAMILLVPIYLLTAVGVKMSSKGSILFSQERIGKEGKPFMMHKFRSMYADAESR
                     GPQLSSDDDPRITKFGKFIRKVRLDEIPQFYTVLKGEMSIVGPRPERQFYINQIVKKA
                     PHYRLLMKIKPGITSWGQVKFGYASNIEEMIDRLRYDILYLENMSIAMDFKILIYTVL
                     IVLQGRGK"
     gene            complement(1096..>1853)
                     /locus_tag="QF480_00945"
     CDS             complement(1096..>1853)
                     /locus_tag="QF480_00945"
                     /inference="COORDINATES: protein motif:HMM:NF014567.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HJN05157.1"
                     /translation="NDHLEDLVKDRTKELEIANHQLSILDQAKSNFLLIISHEIRTPL
                     NGVIGLTELLDNTNIDKNQKEYLNYLKEVSSRLVKFSDTALLITSLKINDHIPEILSV
                     SINQVIADSIVDFQKNNSESSLQITNNMPSEDLLIKVDSNLMKTCFMSIIENSAKFAG
                     ETAHIDISANISDNSISLKFCDNGPGFSDDAFSHLFELFSAGDILHKEGTGLGLATAK
                     LILDAHDGTIDVKNVESGGGAEVNIKLKYSLSE"
BASE COUNT          620 a          305 c          320 g          608 t
ORIGIN      
        1 agttttcggt taacaattac aacaaccaca gttagacgga ttcatgccgg aaaaataggt
       61 tttaatactg ttgttattgg aagcaatggc aatgctgtta aagtttataa tgatataaca
      121 agtcaggaac tttcttccgg aaataaattt attggatttg ttaatgtcca cgatcatggt
      181 tactttaaga tagagcaata tttgcctcat cttggcgcat acaaaggttt aaataagatt
      241 attatagact atcaggtgga ggaagtaata ttggctattg aaaggcttga gattgataca
      301 attgaaagaa taattactga attggaaaca acaaacgtgc taattaaggt aataccttta
      361 atgcaggata ttatttttgg ttctgttaaa gtttctggta ttttccatac acctcttatt
      421 gaaatctcac cagatttaat gcctgtttgg caacaatcaa ttaaaagagt catagatatt
      481 attgtatcat tatttgcaat gattttactt gttcctattt atttgttgac agcagtaggc
      541 gtgaaaatgt cttcaaaggg gtcaattctt ttctcacaag agcgtattgg gaaagaaggc
      601 aaaccattca tgatgcacaa attcagatcg atgtatgctg atgctgaaag ccgaggacca
      661 caattaagct cagatgatga tccaagaata acgaaatttg gtaagtttat acgaaaggtg
      721 agacttgatg aaataccgca gttttacaca gttttaaagg gtgaaatgtc aatcgtagga
      781 ccaaggcctg aacgacaatt ctacattaat caaattgtga aaaaagctcc ccattaccgt
      841 ttattgatga aaataaaacc tggtattact tcttggggac aggttaagtt tggttatgca
      901 tcaaacattg aagaaatgat tgacaggctc cgatacgaca tattatatct ggagaacatg
      961 tcgattgcca tggacttcaa gatattgata tacactgtct taattgttct ccaaggcagg
     1021 ggtaagtaaa tccagatata gaatacgcca gcccatcttc ttgatcaaag cgctatgatt
     1081 ctttagaaat attatttatt cagaaaggct atacttaagt ttaatattca cttctgcacc
     1141 tcctccggat tcaacatttt taacatcaat agttccatcg tgtgcatcca gaattaattt
     1201 agcagttgca agacctaatc ctgtaccttc tttatgaagt atatcaccag ctgaaaaaag
     1261 ttcaaataaa tgactgaagg catcatcaga aaatccaggt ccattatcac aaaattttag
     1321 cgaaattgaa ttatccgaaa tatttgcaga tatatcgata tgcgctgtct caccggcaaa
     1381 ttttgctgaa ttttcaataa tgctcataaa acaggtcttc attaaattag aatcaacttt
     1441 tattaataag tcctctgacg gcatattgtt cgttatttgt aatgaagact cactattatt
     1501 tttctggaaa tcaactatag aatcggcaat aacttgatta atcgatacag acaaaatttc
     1561 aggaatgtga tcgtttatct ttaaagatgt tattaataat gcagtatcac taaattttac
     1621 cagtcgggat gagacctcct taagataatt aagatattcc ttttgatttt tatcaatatt
     1681 tgtattgtct aataactcag ttaaaccaat aacaccattt aagggtgtac gtatttcatg
     1741 gctgataatc aacaaaaaat tactctttgc ctgatccaga atacttagtt gatggtttgc
     1801 tatttccaac tccttggtac gatcctttac aagatcctcg agatgatcat tca
//
LOCUS       DASCQP010000059         4384 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000222368, whole genome shotgun sequence.
ACCESSION   DASCQP010000059 DASCQP010000000
VERSION     DASCQP010000059.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4384)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4384)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4384
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000222368"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(141..1367)
                     /locus_tag="QF480_00950"
     CDS             complement(141..1367)
                     /locus_tag="QF480_00950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018108788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2062 domain-containing protein"
                     /protein_id="HJN05158.1"
                     /translation="MSQILRESISAKGQNICVIIPTYNNASTIENVIDGVLKYTNNII
                     VVDDGSTDDTMTILEKFKTIDVITYEKNIGKGWAIRKGFEKALSQGFDYSITIDSDGQ
                     HFPDDIPLFINELDKNPDSLIIGSRNITADGMPSKNTFANKFSNFWYWAETNIKLPDT
                     QSGFRLYPIKLYKNTKFFTRKFEFEIEVLVRSAWSDISVIPIPIKVYYPPAEDRITHF
                     RPIPDFTRISILNTVLVLITFLYIIPIRATKYLINNKFARVIKEQIMLHNENPIKISA
                     GIGFGVFMGVAPIWGFQMIVAVMIAHFLKLNKIIVLAFSNISLPPLIPLIIYLSYAVG
                     GLVMDNPMEFTTETMYYLKDQIMQGEFYNTLNEFGYSILQYIIGSILFGLLLGGIAAA
                     ISYIIIKLSTIKQNKS"
     gene            complement(1408..2406)
                     /locus_tag="QF480_00955"
     CDS             complement(1408..2406)
                     /locus_tag="QF480_00955"
                     /inference="COORDINATES: protein motif:HMM:NF013292.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase"
                     /protein_id="HJN05159.1"
                     /translation="MINRRRFLEKVAAAGALSLVPNIIKSHEVSTFASNETSSLPVII
                     STWNHGIEANAAAMNVLNNNGSVVDAVEQGVWIPEADPKNRSVGLGGFPDREGHVTLD
                     ASIMGPDGNAGSVCFLEHIVHPISVARLVMDSTPHVILSGEGALQFALENGFEKQNLL
                     TPEAEKAWKKKLVTSGYNPQPNWENEPNKFHDTIGLLAIDSKGDIAGACTTSGLGFKI
                     RGRVGDSPIIGAGLFVDNEIGAATATGMGELVLKTLGSFLVVELMRNGRTPQQAVEEA
                     VLRIVKKVPEHKKYQVGYIAVNKQGETGAYCLQPGFNYALYQNGENLLIDSDSYFK"
     gene            complement(2396..3772)
                     /locus_tag="QF480_00960"
     CDS             complement(2396..3772)
                     /locus_tag="QF480_00960"
                     /inference="COORDINATES: protein motif:HMM:NF019310.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar MFS transporter"
                     /protein_id="HJN05160.1"
                     /translation="MNNPSRINNYSGAFVSLTFLFFMWGFMTVLNDILIPYLRQAFDL
                     NHTKAMLIQFAFFMSYFIGSIIYFTISVLKGDPISKIGYKKGIIIGLVISGIGALLFY
                     PAAQFQMYGFFLSALFVLGLGFTLLQIAANPYVAILGPEKSASSRLNLAQGFNSLGTT
                     IGPVLGGYLIFTFFKDSAGSDAVKIPYLVFALIFLLMAIAIKLTPLPRLTNPGEVVPG
                     FGALKYRQLVFGMIAIFMYVGGEVSIGSMLISYLNLPEIGGFDDADASLYVSIYWGGQ
                     MIGRFLGAVSLSTAKKSVKLIVMPSISALAFLIIGLSTSFESALIYLVFLIINLIAFY
                     FGKSLPHKTLFLFAIVNIIFLIIALTNTGEIALWTIIGIGLFNSIMWSNIFTLAISGL
                     GKHTSQGSSLLVMMILGGAILPLFMGLVADSFGVQMSFIVPVFSYIYLAYYGISGYKP
                     KTTITHDQ"
     gene            complement(3827..4282)
                     /locus_tag="QF480_00965"
     CDS             complement(3827..4282)
                     /locus_tag="QF480_00965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004369337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HJN05161.1"
                     /translation="MSLEITINDDIKQAMLARDKRKLNALRAIKAALLLEKTGTDVSG
                     SEVPESVELKLLQKLVKQRKESAILYKEQNRADLAEEEEFQSSIIEKYLPEQISENEI
                     LELVKKIISETGANTMKDMGRVMGMASKQLAGKADNKTVSGIVKDLLSK"
BASE COUNT         1420 a          829 c          719 g         1416 t
ORIGIN      
        1 tttaagccga ctggccatat atgcacttcc agatatgaat agtaccaaaa gaataagaga
       61 aataattctg tgattctcaa tccttttata tatggctaaa aacagtacgc tcataattgg
      121 tcacttattc attttaggac ttatgattta ttttgcttta ttgttgacag tttaataatt
      181 atatatgata ttgctgctgc tatgccgcca agcaataacc caaacaagat acttccaata
      241 atatattgca atatgctgta accgaattca ttaagcgtat tatagaattc accttgcatg
      301 atctggtctt ttaaatagta cattgtttcg gttgtaaact ccattggatt atccataact
      361 aacccaccaa cggcatagct caaataaata ataagcggga tcagcggagg taagctaata
      421 ttggagaaag ccagaacaat tattttgttg agttttagaa aatgtgctat cattacagcc
      481 acaatcattt gaaatcccca aataggtgcc acacccataa atactccaaa accaatacca
      541 gcagagattt ttatcggatt ttcattatgc aacattattt gttccttaat aactctggcg
      601 aacttgttat taatcagata tttagttgct ctaattggga taatgtacaa gaatgtaatt
      661 agcacaagaa cggtattaag tatgctaatt cttgtaaaat caggaattgg tctgaaatgt
      721 gttatgcgat cttcggcagg agggtagtaa acctttatag gaataggaat tacacttata
      781 tcactccatg ccgatctaac cagtacttct atttcaaact caaatttacg agtaaagaat
      841 tttgtgtttt tgtataattt aattggatac aacctaaatc ccgattgtgt atcaggaagc
      901 ttgatatttg tttcagccca gtaccagaag ttcgagaatt tgtttgcaaa tgtatttttt
      961 gaaggcatcc catcggcagt aatatttcgt gatccaataa ttaaagaatc tggattctta
     1021 tcaagttcat taataaaaag agggatatca tcagggaaat gctggccgtc agaatcgatg
     1081 gttattgaat aatcaaaacc ttgtgaaagt gctttctcaa atcccttccg gattgcccaa
     1141 cctttaccaa tatttttctc gtaagtaatt acatcaatgg tcttaaactt ctctaaaatt
     1201 gtcattgtat cgtctgtaga gccatcatct actacaatga tattatttgt gtatttgagc
     1261 actccatcaa taacattttc aatagttgat gcattattat aagtaggaat aataacacaa
     1321 atgttttgtc ctttagcaga aatactttca cgtagaattt gactcattta agagtgtttt
     1381 gcttagcaga caaaggtagt aaaataccta tttaaagtat gaatcactgt ctataagcaa
     1441 gttttcacca ttttggtaaa gggcataatt aaatccgggt tgcaagcaat aagcccctgt
     1501 ttcaccttgt ttgttgactg caatatatcc tacctgatat tttttgtgtt caggtacttt
     1561 tttcacgatc ctcaatactg cttcttcaac tgcttgctga ggagttcttc catttctcat
     1621 tagttctaca actaaaaacg atcctaatgt tttcaaaaca agttcgccca ttcctgtagc
     1681 tgtagctgct ccaatttcgt tgtcaacaaa cagtcctgca ccgatgattg gtgaatcacc
     1741 cactctgcct cgaattttaa atcccaaacc acttgtagtg catgcaccgg ctatatcgcc
     1801 tttggaatct atagctagca agccaatcgt atcatgaaat ttatttggtt cgttctccca
     1861 gtttggttgt gggttataac cagaagttac tagttttttc ttccaggctt tttcagcttc
     1921 aggagttagt aagttctgtt tctcaaatcc attctcaagt gcaaattgta gagctccttc
     1981 tcccgaaagg ataacatgag gagtgctatc cattaccaac ctcgctactg aaatcggatg
     2041 cacaatatgt tctaaaaaac aaaccgaacc ggcattacca tctggaccca taattgaagc
     2101 atcaagagta acatggcctt ctctatcagg gaacccacct aatccaacac tccggttttt
     2161 aggatcagct tcgggtatcc aaaccccctg ttctactgca tctacaacac tgccattatt
     2221 attgaggaca ttcatagcag cagcattagc ctcaatacca tgattccatg tagaaataat
     2281 tacagggagg ctactggttt cattacttgc aaacgttgat acctcatgtg atttaataat
     2341 atttggaact aaacttaagg cgccggccgc agcaactttt tcaagaaatc ttcttctatt
     2401 gatcatgtgt tattgtagtt tttggtttat aaccagagat accataatat gctaaataaa
     2461 tataactaaa aacagggact ataaacgaca tttgaacacc aaagctatca gcaaccagtc
     2521 ccataaataa tggtagtatg gcacctccta atatcatcat tacaagtaag gaagatccct
     2581 ggcttgtgtg tttccctaac cctgaaattg ccaatgtaaa tatatttgac cacataatgg
     2641 aattaaataa tcctatacca attattgtcc ataatgctat ttcccctgta tttgttaaag
     2701 cgatgatcag gaatatgatg ttgacaattg caaacaggaa taaggtttta tgtggtaatg
     2761 atttgccaaa ataaaaggcg ataagattta ttattaagaa aaccagataa atcagtgctg
     2821 attcaaagct tgtactcaga ccaattatta aaaatgctaa tgctgatata gaaggcatta
     2881 ctattaactt tacggatttc tttgctgtac ttaaagatac tgctccaaga aatcgtccga
     2941 tcatttgacc tccccaatat attgaaacat agagacttgc atcggcatca tcaaatccac
     3001 caatttcagg aaggtttaaa taacttatta gcatgctgcc aatacttact tctccgccta
     3061 cgtacataaa aattgctatc ataccaaata caagctgcct atattttagt gcgccaaaac
     3121 cgggtacaac ttcacccgga ttagttaatc tagggagtgg tgttaattta atagctatag
     3181 ccatcagtaa gaaaatcaga gcgaaaacaa gatatggtat tttaacagca tctgatcctg
     3241 ctgaatcctt gaagaaggtg aaaattaaat accctcctaa aaccggacca atggttgttc
     3301 caagtgagtt gaatccttga gcaagattta gtcgtgatga agctgatttc tccggtccaa
     3361 gaatagcaac ataaggattt gccgctattt gtaacaatgt gaatcccaat cccaaaacaa
     3421 acaatgcaga aagaaagaat ccatacatct gaaattgtgc tgcaggataa aaaaggagtg
     3481 ctccaattcc tgaaattact aatccaatta ttataccttt cttataacct attttgctaa
     3541 tcgggtctcc tttcaaaaca gaaatggtaa aataaataat ggaccctata aaatatgaca
     3601 taaaaaaagc aaactgtata agcattgctt ttgtgtgatt caaatcaaag gcctgtctta
     3661 gatagggtat gagaatgtca ttaagtactg tcataaaacc ccacataaaa aagaggaaag
     3721 taaggcttac gaaagcacct gaatagttat taatacgaga tggattgttc atagtttggt
     3781 ttaactaaat agttggtaat aataattaga atctgatgta aaaatgttat ttcgaaagta
     3841 ggtctttaac aatacctgaa actgttttat tatcagcttt tcctgcaagt tgttttgatg
     3901 ccatccccat tactcggccc atatctttca ttgtatttgc tccagtttca ctaattattt
     3961 ttttaacaag ctctaatatt tcattttcac taatttgttc aggcaagtat ttttctatta
     4021 tagaagactg aaactcttct tcctcagcaa ggtcagcacg attttgttct ttataaagaa
     4081 tagccgattc ttttctctgt tttacaagtt tttgcaaaag tttaagttct acactttcag
     4141 gtacttcaga accactgaca tcggtgccgg ttttctccaa taataaagca gcttttatag
     4201 ctcgtaaagc attgagtttg cgcttatcgc gagcaagcat tgcctgctta atgtcatcat
     4261 taatagttat ttcaagactc atattaccac agtttgtgtg caaatataat catattgagc
     4321 agaaggaaat ttgccctgaa taatgttgga atttgagaga aataccaaca cagaattttt
     4381 aatt
//
LOCUS       DASCQP010000060         1993 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000223648, whole genome shotgun sequence.
ACCESSION   DASCQP010000060 DASCQP010000000
VERSION     DASCQP010000060.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1993)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1993)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1993
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000223648"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..351
                     /gene="rplC"
                     /locus_tag="QF480_00970"
     CDS             <1..351
                     /gene="rplC"
                     /locus_tag="QF480_00970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016275270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HJN05162.1"
                     /translation="GDILTVDVFREGEFIDVVGTSKGKGFQGVVKRYNFKGVNDATHG
                     QHNRLRAPGSIGASSYPSRVFKGMRMAGRMGGDRVKLINLQVMKIYPEKNVVVVKGAV
                     PGPNNSLVILERWS"
     gene            342..974
                     /gene="rplD"
                     /locus_tag="QF480_00975"
     CDS             342..974
                     /gene="rplD"
                     /locus_tag="QF480_00975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007174504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HJN05163.1"
                     /translation="MELVVHKVSGEATKRKVKLDNTIFGIEPNDHAIYLDAKQYMANK
                     RQGTHDTKERSDIIGSTRKIKRQKGTGTARAGSIKNPIFRGGGRTFGPHPRDYSFKLN
                     KKVKRLARKSALSYKAKEDSILIVEDFKLENPKTRDFQEILKSFKIDNKKTLFVLNQS
                     DENIYLSARNIENVKVLRAEGINTYEVLHANKIVIVESSLETIVEVFANK"
     gene            987..1277
                     /gene="rplW"
                     /locus_tag="QF480_00980"
     CDS             987..1277
                     /gene="rplW"
                     /locus_tag="QF480_00980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005844851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HJN05164.1"
                     /translation="MGVILKPVITEKMTTKAEQLNQYGFIVDKRANKIQIKGEVEELY
                     GVEVLSVNTMNYSGKRKSRNTKSGVISGKTNAFKKAVVTIAEGESIDFFSNI"
     gene            1280..>1993
                     /gene="rplB"
                     /locus_tag="QF480_00985"
     CDS             1280..>1993
                     /gene="rplB"
                     /locus_tag="QF480_00985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005853970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HJN05165.1"
                     /translation="MALKKYKPTTPGQRFKIISAFDDITTNKPEKSLIVGKKSTGGRN
                     NEGRMTIRNVGGGHKQKYRIIDFKRDKENIPGIVKAIEYDPNRTARIALIYYVDGEKR
                     YIVAPHGLEVGQEIISGKGISPNVGNTMYLSEIPFGTVIHNIELRPGQGAKMSRSAGS
                     YAQLMTREGKFAIIKLPSGETRMILQTCKATVGMVSNIDHNLEKSGKAGRSRWLGRRP
                     RVRGVAMNPVDHPMGGGEGR"
BASE COUNT          726 a          296 c          428 g          543 t
ORIGIN      
        1 ggtgatattc taacagttga tgtttttaga gaaggtgaat ttattgatgt tgttggaaca
       61 tccaaaggaa agggatttca gggtgttgtt aagcggtata actttaaagg tgttaatgac
      121 gctactcatg gacaacataa cagattaaga gctccaggat caattggtgc atcttcatac
      181 ccatcccgag tttttaaagg tatgcgtatg gcaggccgta tgggtggaga tagagtgaaa
      241 ctcatcaacc tccaagtgat gaaaatttac ccagaaaaga atgtagtagt agtaaaaggg
      301 gctgttccag gtcctaataa ttcactagta atattagaaa gatggagtta gtagttcata
      361 aagttagcgg agaagctacc aaaagaaaag taaagctgga taataccatc tttgggattg
      421 aacccaacga ccatgccatt tatcttgatg cgaaacagta tatggcaaat aagcgtcagg
      481 gaacacatga taccaaagaa agaagtgata taattggaag cacacgtaaa atcaagcgcc
      541 aaaaaggcac aggtacagca cgtgcaggta gtataaagaa tcctatattt cgtggtggtg
      601 gtcgcacttt cggaccacat cctcgtgatt attcttttaa actaaataaa aaggttaaac
      661 gtctcgcacg taaatctgct ttatcatata aagccaaaga agatagtata ctaattgtag
      721 aagactttaa acttgagaat ccaaaaacta gggattttca agaaatttta aaaagcttca
      781 aaattgacaa caaaaaaact ttatttgttt tgaaccagtc tgatgaaaac atctatttat
      841 cagcaaggaa cattgaaaat gttaaagttt taagggctga aggaattaat acatatgaag
      901 ttcttcatgc caataagatt gttattgttg aaagctcgtt agaaaccatc gtagaagtat
      961 tcgcgaataa ataaaactga aaagagatgg gtgtaatatt aaaaccggta attacagaga
     1021 aaatgacaac caaagctgaa cagcttaacc agtatggttt tattgtcgat aaaagggcaa
     1081 ataaaattca gataaagggt gaagttgaag agctttatgg tgttgaagta ctttctgtaa
     1141 acactatgaa ttactcaggg aaaaggaaat cacgtaatac aaaatcaggc gtaatttctg
     1201 gtaagacaaa tgccttcaaa aaagctgttg ttacaatagc agaaggtgaa tcaattgatt
     1261 tctttagcaa catttagaaa tggctctcaa aaaatataaa ccaacaacac caggtcaacg
     1321 ctttaagatt ataagcgctt ttgacgatat tactaccaat aagcctgaaa aaagccttat
     1381 tgttggtaag aaaagtacag gtggtagaaa taatgaaggt agaatgacta ttcgcaatgt
     1441 aggcggaggt cataaacaga aatacagaat aattgacttc aaaagggata aggaaaatat
     1501 tcctggaata gttaaagcaa tagagtatga tccaaatcgt actgcacgta ttgctttaat
     1561 ttattacgta gatggagaga agaggtacat tgttgcccct catggacttg aagttggtca
     1621 ggaaattatt tctggtaaag gcatttctcc taatgtagga aatacaatgt atttaagcga
     1681 aatacctttt ggtacagtaa ttcacaacat tgaacttcgt cctggacaag gtgctaaaat
     1741 gtcacgtagt gcgggatcat atgctcaatt aatgacacgt gaaggcaaat ttgcaattat
     1801 taagttacca tcaggtgaaa caaggatgat attacaaact tgtaaagcta ctgtaggtat
     1861 ggtttcaaat attgatcata accttgaaaa gtctggtaaa gctggtcgta gccgctggtt
     1921 gggtcgtcgt ccaagagtac gtggtgtagc gatgaatcct gtagatcacc caatgggtgg
     1981 aggagaagga aga
//
LOCUS       DASCQP010000061         2090 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000223973, whole genome shotgun sequence.
ACCESSION   DASCQP010000061 DASCQP010000000
VERSION     DASCQP010000061.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2090)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2090)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2090
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000223973"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..139)
                     /locus_tag="QF480_00990"
     CDS             complement(<1..139)
                     /locus_tag="QF480_00990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008667458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0758 domain-containing protein"
                     /protein_id="HJN05166.1"
                     /translation="MKDKLPISQWSEDDRPREKLTIKGKGQLSRAELIAILIGSGNHE
                     ES"
     gene            complement(229..483)
                     /gene="rpsT"
                     /locus_tag="QF480_00995"
     CDS             complement(229..483)
                     /gene="rpsT"
                     /locus_tag="QF480_00995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010801858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HJN05167.1"
                     /translation="MANHPSAIKRIRQTETRTLHNRFYAKTMRNAVRKFRLLTDKKEA
                     ADSLPKLYEMIDRLSKKGIIHKNKAGNLKSRCTKYANTLS"
     gene            complement(568..1857)
                     /gene="mtaB"
                     /locus_tag="QF480_01000"
     CDS             complement(568..1857)
                     /gene="mtaB"
                     /locus_tag="QF480_01000"
                     /inference="COORDINATES: protein motif:HMM:TIGR00089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-
                     methylthiotransferase MtaB"
                     /protein_id="HJN05168.1"
                     /translation="MTKKIAFKTLGCRLNLFETDSLASEFTKKDYQTVDFAEKADIYV
                     INTCTVTSMSDQKSRRAISQAKRKNKNGITIVTGCMATNYKEQLEKNEKIDYVIDNDH
                     KTSVLSVAEAHFNGEIVSADNYEKNLFNYEPADQTFHTRSFIKIQDGCDNFCTFCIIP
                     KVRGRASSRPVADVLNNVRKVVEFGFKEVIITGVNIGRYNHNNTDFESLVEQMLDIPG
                     DFRIRISSIEPDGYTDSFFRLFKHPKLAPHMHICLQSGSEEILMKMRRMYTAKLFKEM
                     ASKLEELHPGFSLTTDIIVGFPGETEEQFQETVDLANTIGFGHIHTFKYSVRKGTRAE
                     RLPEQIDENEKNLRGEIIRKLSENTRSKYRNSFIGKQQKVLVQIIIENGFARGYGEHY
                     IPVIIEKTGLTKNTFYNVDINGIIEKDEPILVGTLSN"
     gene            complement(1850..>2090)
                     /locus_tag="QF480_01005"
     CDS             complement(1850..>2090)
                     /locus_tag="QF480_01005"
                     /inference="COORDINATES: protein motif:HMM:NF014047.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TRAM domain-containing protein"
                     /protein_id="HJN05169.1"
                     /translation="TTELTKYSHEYNSGLIGKTIKVLVRGNDRKSDYLSAYTEGRIVA
                     RFASNDSNLVGKFVNIMITSAAPLSIEGELVKHYD"
BASE COUNT          598 a          386 c          325 g          781 t
ORIGIN      
        1 ctgattcttc atggttacct gaaccgatca atattgcaat taactcagca cgactcaact
       61 ggcctttacc ttttattgtt agtttctctc gtggacgatc atcttccgac cattgactaa
      121 tgggtaattt atccttcata gcattttggg tttttggggc cataaaagta agcaaaaaaa
      181 aagtcccgat acaaatatac cgggacttaa attatttctt atttgactct atgacaaagt
      241 atttgcatat tttgtgcatc tcgattttag attaccggct ttgtttttat gaataattcc
      301 tttttttgaa agccggtcaa tcatttcgta aagttttggt aaagaatctg ctgcttcttt
      361 tttgtcagtt aatagcctga attttcttac tgcattacgc attgtttttg cataaaagcg
      421 attgtgaagc gttctggttt cggtttgtct gattctttta attgctgaag gatgattagc
      481 catatttctt ttccgttttt ataaaattaa tttcgggctg caaaaataga taaatattta
      541 atataaaaaa ataatcctct ttatttttta gtttgataat gttcccacta atataggctc
      601 atctttttca ataatgccat tgatatcaac attataaaaa gtatttttag taaggcctgt
      661 tttttcaata ataacaggta tataatgctc tccataccct ctcgcaaaac cattttcgat
      721 tattatttga acaagtactt tttgttgctt tccaataaat gagttacgat attttgatct
      781 tgtgttttct gaaagttttc gaattatttc tcctctgagg ttcttttcat tttcgtcaat
      841 ttgttcagga agtctttcag cgcgagttcc tttacgtacc gaatatttaa aagtatgaat
      901 atgaccaaat cctattgtgt tggcaaggtc aacggtctct tgaaattgct cttcagtttc
      961 accgggaaaa cccacaatta tatctgtagt aagactaaaa ccgggatgca attcttccag
     1021 tttggatgcc atttctttaa acaactttgc cgtatacatt cgcctcatct tcattaagat
     1081 ttcttctgaa ccactttgaa ggcagatatg catatgagga gcaagttttg gatgtttaaa
     1141 taatcgaaag aagctatcgg tgtaaccatc cggttcaatt gaagatattc gaattctgaa
     1201 atcacctgga atgtcaagca tttgctctac aagcgactca aaatcagtat tattgtgatt
     1261 atatctacca atatttacac cagtaattat aacttcttta aacccaaact caactacttt
     1321 tctaacatta ttgagaacat ctgcaaccgg ccgactactt gctcttccac gcaccttcgg
     1381 gattatacaa aaagtgcaga aattgtcgca accatcttgt atttttataa agcttctagt
     1441 atgaaaagtt tggtcggcag gttcataatt aaaaaggttt ttttcgtagt tgtcagcgct
     1501 aacaatttcg ccattaaaat gtgcctccgc aacagacaag acagatgttt tgtgatcatt
     1561 atcaatcaca taatcaatct tctcgttttt ttcaagctgt tctttgtaat ttgtggccat
     1621 acagccagtt actattgtaa ttccattttt attttttctc tttgcctgac ttattgctct
     1681 acgtgatttt tgatcgctca tacttgtaac cgtgcatgta ttgatcacat atatatccgc
     1741 tttttcagca aaatcaactg tttgatagtc ttttttagtg aattcagagg caagtgaatc
     1801 agtttcaaat agattaagcc tacacccaag agttttaaaa gcaatttttt tagtcataat
     1861 gttttactag ttctccttca attgaaagtg gcgcagccga tgtaatcatt atattcacaa
     1921 attttccaac tagattactg tcgtttgaag caaatctggc aactatcctg ccttcggtat
     1981 atgcagacaa ataatctgat ttgcgatcat ttcctctaac aagcactttt attgttttgc
     2041 caataagacc actattatat tcatgagaat attttgtcag ttcagtcgtg
//
LOCUS       DASCQP010000062         2521 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000230491, whole genome shotgun sequence.
ACCESSION   DASCQP010000062 DASCQP010000000
VERSION     DASCQP010000062.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2521)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2521)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2521
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000230491"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            270..2168
                     /locus_tag="QF480_01010"
     CDS             270..2168
                     /locus_tag="QF480_01010"
                     /inference="COORDINATES: protein motif:HMM:NF015557.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HJN05170.1"
                     /translation="MSTDQLAISLIIITTFGLFVWGRWRYDIVSIVALFALVLIDMIL
                     GGESSSLITDPSQAFMGFGHPAVVTVAAVLIISRALRNSGVVDLIVRHVKPFTNKQTV
                     HITSLSGVIAILSAFMNNIGALALMLPVTLKTAWDQKRSPSILLMPIAFASILGGMIT
                     MIGTPPNIIIANLRKEQQQQILSRALSDSSSQAAAYLDHVNILKESFEPAPFGLFDFT
                     PVGGIIAILGVLFVAAAGWRLVPKERQIKPSSGSLFSLDQYVTEIRFSEGSTLIGESA
                     EEINRITGDKLTLIRYIDGEGKVKPLNQDNRIKAGDQFLAMADPGDLKEIMDEYSLRL
                     TEEMRYRIDSLKDEDTTFIEVVVSPESPLVGRERTYLRRRSSNQLILMAVARQDKPIH
                     KRLGKIQFRIGDVLLLQGREEELKNNILSLDLLPLAEREIEVGEFSKVSYALLIFTVA
                     ILLSMLSIIPTTVSFTGAILVYVFSGILPVRDLYKNIDWPVIVLLGAMIPLSNALQST
                     GATTLIAGQVVSMTQGLPTWSIIALIMVITMCLSDIINNAATALIMAPISVGIAISMG
                     VNMDPFLMSVAVGASCAFLTPIGHQCNALILGPGGYRFSDYWRMGLPLEIIIVAAGTP
                     LILHFWPL"
BASE COUNT          755 a          428 c          554 g          784 t
ORIGIN      
        1 tatgattttg aaaaggctgt tgatgcgtat aaggatggga aagataagtt gttaagtgaa
       61 attataattc ctggagagat tgtttctgaa ttgcatcctg ttgttgaaat aaaaaaagat
      121 aggcttcaag agaaaataaa aggtctagaa ggagattaga tttagcgcaa ttggatagaa
      181 atcttcagaa gaaacaaaag gaagagacca gaaaggcaat gaaatgacca aaactgaatt
      241 aaacacattt gatttagata gtgatgttga tgtctactga ccaacttgcc atatctttaa
      301 tcattattac tacctttgga cttttcgtat ggggtcgctg gaggtatgat attgtttcta
      361 tagtagcact ttttgcgctt gtactaatag atatgattct tgggggtgaa agttcgtcac
      421 tgattacaga tccaagccaa gctttcatgg gatttggaca tccggcagtg gttacagttg
      481 cagcagtgct gattatcagc cgtgccttac ggaattctgg tgttgtagat ctgatagttc
      541 gacatgtaaa accatttacg aataaacaga ctgtgcatat taccagtcta agtggcgtca
      601 tagccatcct atcagcattt atgaataaca taggagcact ggctttgatg ctgccggtca
      661 cgctcaaaac agcctgggat cagaaacgtt cccccagtat tttattaatg cctattgcct
      721 ttgcttctat cctgggcggg atgatcacca tgattggtac accgccaaat attattattg
      781 ccaatctgag gaaggaacaa caacaacaaa tcctgtcaag agcactgtca gatagttcat
      841 ctcaagcggc ggcctattta gatcatgtaa atatcttgaa agaatcgttt gaaccagctc
      901 cgtttggcct ctttgatttc acaccagtgg ggggcattat agcaatttta ggtgtgcttt
      961 ttgttgcagc ggcaggctgg cgactggttc ctaaggaaag gcaaataaaa ccaagttccg
     1021 gctcactttt ttcattagac caatatgtca cagaaattcg tttttctgaa gggagcacct
     1081 taattggtga atctgcagaa gaaataaaca ggataacagg cgataagcta actctgattc
     1141 gttatattga tggggaagga aaggtgaaac ccttgaacca ggataataga ataaaagcag
     1201 gcgatcagtt tcttgccatg gccgatcccg gtgatttgaa ggaaataatg gatgaatata
     1261 gtttacgcct taccgaagaa atgcgctatc gtattgattc cttgaaagat gaggacacga
     1321 cttttattga agtagtagtt tcacccgaat ctccattagt aggacgggaa cgtacctatt
     1381 tgcgaaggcg gtcatctaac caactgatcc ttatggcggt tgcacgacaa gataaaccaa
     1441 tacataagcg tttgggcaag atacagtttc gtataggtga tgtacttttg ctacaaggtc
     1501 gcgaagaaga attgaagaat aatattttat ctcttgatct gttaccattg gctgaacggg
     1561 aaatagaggt tggtgagttt tcgaaggtca gctatgctct gttgatcttt actgttgcaa
     1621 ttcttctgag tatgctatcc atcataccca caactgtatc atttacaggt gcaattttag
     1681 tttatgtttt ttcgggtata ttaccagtac gtgatttgta taagaatatc gattggcctg
     1741 ttatcgtgtt attgggagcc atgattcctt tgagcaatgc tttgcaaagt acaggcgcca
     1801 caacattaat tgccggtcaa gtggtcagta tgacccaagg attgccaact tggtcaatta
     1861 ttgctctgat tatggtgatt acaatgtgct tgtcggatat tattaataat gcggccacag
     1921 cgctgattat ggcaccaata agtgtgggaa tcgcaatctc aatgggagta aatatggatc
     1981 cttttttaat gtcagtggct gtaggtgctt cttgtgcatt cctaacccct attggccatc
     2041 agtgtaatgc gcttatttta ggccctgggg gttaccgttt cagtgattat tggcgtatgg
     2101 gacttccttt agagataatt attgttgcag cagggacacc attgatctta catttttggc
     2161 cgttgtaggt aaatattaaa gagagaataa gggaatgtaa tatggaagtc aaaaaaatgg
     2221 gttaaagcct tggcaaggaa gagcaagaga gaatttttca agaaattaaa gacaattcaa
     2281 caaatgctga atcgttatat ttattctttt atccttcaaa gaactttcaa taatttttct
     2341 acgatatata gtttgacagt aacctaaaat acacactatg ataaggaaag gataactgat
     2401 tttaaggact ttctacgttc ttgaatttta gcgcatagtc tcctctaatt attggaatat
     2461 tagctaaaat ttaatgttgc aatttataat tcttttgata agctatctgt cgatcctgat
     2521 a
//
LOCUS       DASCQP010000063         3707 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000230544, whole genome shotgun sequence.
ACCESSION   DASCQP010000063 DASCQP010000000
VERSION     DASCQP010000063.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3707)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3707)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3707
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000230544"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            53..1573
                     /locus_tag="QF480_01015"
     CDS             53..1573
                     /locus_tag="QF480_01015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005854801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052855 - ADP-dependent NAD(P)H-hydrate
                     dehydratase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HJN05171.1"
                     /translation="MKIFSVDKIREADTSTINNEPISSIDLMERASTQLFNWIKEHVT
                     TEKKINIFCGLGNNGGDGLALGKMLANSNYQVIINIIRYSEKTSDDFQINYNRLTGIS
                     GITIVDIKETNELQNIEPEDVVIDAIFGSGLTKPVKGVIGEIVRFINETKSITIAIDM
                     PSGLFADKSSIIEKGEIIHADYTLSFQFPKLAFLLPENELYVGNWEVLDIGLSSDYIN
                     STGTKNHYIIDKDIYPILKGRAKFSHKGTYGHALLIAGSYGKMGAAILASRACLRSGV
                     GLLHTHVPKSGIQILQTASPETMISIDRYDNYFSEVPNIGQYNAIGIGPGLGMEHQSQ
                     MAMKLLIQNSTCPMVIDADALNILSENPIWLAFLPQGSILTPHPKEFERLAGKWRNDF
                     ERLDKQRNLAQKHGIYIVLKGANTSICFPDGQCYFNSTGNPGMATAGSGDVLTGIITG
                     LLASGYSSGIASILGVYVHGLSGDLTADELGYESLIADDIIDNLGKAFNRLGQKSS"
     gene            complement(1577..2104)
                     /locus_tag="QF480_01020"
     CDS             complement(1577..2104)
                     /locus_tag="QF480_01020"
                     /EC_number="2.1.1.100"
                     /EC_number="2.1.1.334"
                     /inference="COORDINATES: protein motif:HMM:NF016107.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HJN05172.1"
                     /translation="MSALDVALSLYLHINRIISRADIYLIKMMIKSRLYPYFLVTVQL
                     ACLFYILISGPIVSNSTAGLLIECAGIFLALLAIYVMKIKNFNLTPIVKQDSELITSG
                     PYRIIRHPMYIAQLLVVLPLVIDYFSWYRFSALVLLAIILLVKIDYEEKLLLGHFTEY
                     LEYKKKTKKLIPYVY"
     gene            2302..2685
                     /locus_tag="QF480_01025"
     CDS             2302..2685
                     /locus_tag="QF480_01025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05173.1"
                     /translation="MKQIALLLIIVFGIGILITSCKKPNVVNPNDGNEIEEVHFPNDF
                     KWNTYNDIPVVIYGQEDGMVTMMSLDGKTYHKAYLTANKELTFKLVVPTYEEKVLLLY
                     KDNNIEIELTGDPINYQFKKNRYEN"
     gene            2675..>3707
                     /locus_tag="QF480_01030"
     CDS             2675..>3707
                     /locus_tag="QF480_01030"
                     /inference="COORDINATES: protein motif:HMM:NF013508.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05174.1"
                     /translation="MKTNYKKSKLLILATGLCLLITGQLFATDYYTVQDGNWNNSNTW
                     QNGQKPPEKDIPSSANIYIRHTVNRNSNDDLKNDGLIHVEPITGTTAKLILKQVNVYN
                     QNNGIIKVIDGYWQNYRFNGGGDSGQSRNGNFYNSDDAYLEVINGVMETAQNWKNEKD
                     SKAYYENSCILMGENYQVDIDKITGSHFEIYKNSNISLGWHGSGNFQQDKGKIDYDGT
                     RIQLAGTSGNFQLSDGEVDGSITLITFKNHDNNNVGGGEIQTSSSISGTTDLDYYWAQ
                     NAGKLDDQGNVFTGNKTFQDITSQYFPNDCGPGSSPECDVAITKVASNSDLEPGDTFT
                     YTLTVTNNGP"
BASE COUNT         1331 a          572 c          692 g         1112 t
ORIGIN      
        1 ccttatttga tatttttgtc atatatttat atccacaaaa aagatcaata tcatgaagat
       61 tttttccgtt gataaaatta gagaagctga tacctctacc atcaataatg aacctatttc
      121 atcaattgat ctaatggaaa gagcttcaac tcaacttttc aattggataa aggaacatgt
      181 aacaactgaa aaaaagataa atatattctg tggtttagga aataatggag gtgatggcct
      241 tgctcttggc aagatgcttg caaatagtaa ttatcaggta ataatcaaca ttattagata
      301 ttctgaaaaa acttctgatg actttcaaat aaactataat agattaaccg gtatttcggg
      361 aattactata gtagatataa aagaaacaaa cgaattacaa aatattgaac ctgaagatgt
      421 agttatagat gcaatttttg gatcaggatt gacaaaacct gttaagggag ttattggaga
      481 aatagttcga tttattaatg aaacgaagtc aattacaata gccattgata tgccatcagg
      541 actctttgcc gacaaaagtt caattatcga aaaaggtgaa ataattcatg cggactacac
      601 actctccttt caatttccta agctggcatt tttgttacct gaaaacgagt tgtatgtcgg
      661 gaactgggaa gtgttggata ttggattaag tagtgattat attaactcaa caggcacaaa
      721 aaaccattac attattgata aagatatcta ccctattcta aaaggccgcg caaaattctc
      781 tcacaagggt acttacggac atgcgttact tattgccggc agttatggaa agatgggtgc
      841 agccatcctg gcatcgagag cttgcttaag gtcgggagta ggtttattgc acacacatgt
      901 acctaaatct ggaattcaga tacttcaaac agcatctccg gaaacgatga ttagcattga
      961 ccggtatgat aactattttt cagaagttcc caatattggg caatacaatg caattggaat
     1021 tggaccggga ctgggtatgg agcaccaatc acaaatggca atgaaattac tgattcaaaa
     1081 cagcacctgt cctatggtaa ttgatgctga cgctctgaat attctttctg aaaatccaat
     1141 atggctggca ttcttaccac aaggaagtat tctcacccct catccaaaag aatttgaacg
     1201 gttggcagga aaatggcgta acgattttga gcgactcgac aagcaacgaa accttgcaca
     1261 aaaacatgga atctatatcg tattgaaggg tgcaaatacg agcatttgtt ttcctgatgg
     1321 tcaatgctat tttaactcaa ctggaaatcc tggcatggct acggcgggta gtggtgatgt
     1381 gctaacagga attataactg gtttgttagc ctcagggtat tcatcaggta ttgcctctat
     1441 attaggagtt tatgttcatg gactttcggg tgacctaaca gctgatgagc tagggtatga
     1501 atcattgatt gctgatgata tcattgataa tttggggaaa gcatttaata gattgggaca
     1561 aaaaagtagc tagagctcag tacacatatg gaattaactt ttttgttttc ttcttgtatt
     1621 caagatattc agtaaaatga cctagtaata gtttttcctc ataatcaatt tttaccagca
     1681 agataatcgc taatagcacc aaagcagaaa atctatacca cgaaaaataa tcgatcacta
     1741 atggcaatac tactaataac tgtgcaatgt acataggatg cctaataatt cgatatggtc
     1801 ccgaagtaat taactcgcta tcttgtttta caatgggtgt aagattaaag tttttaattt
     1861 tcattacata aattgcaagt aacgcgagaa atatacctgc acattcgatc aacaagccag
     1921 ctgtgctatt tgatacaatt ggacccgaga tcagtatata aaataaacaa gctaattgga
     1981 cagttaccaa gaaatatgga tatagtctac tctttatcat cattttaata agataaatat
     2041 cggctctgga tataattcta tttatatgca agtaaagaga aagtgcaaca tccaaagccg
     2101 acatacaaaa ttaataatat tgtggttaac ttttggagtt tatagcaata acaatatgat
     2161 gaaaaaagtt tgattatagg aatatattcc cattgtggga aaaataattg aaaacaattc
     2221 cttagttagt tactatttat caaacaatta ggtatatttg catggttctt gatcttaata
     2281 actagaacga aaaatactgc tatgaaacaa attgcacttc tcttaataat agtttttggg
     2341 ataggtattc tgattacatc ttgtaagaaa ccaaatgtgg ttaatcccaa cgatggaaat
     2401 gagatcgaag aggtacattt tccaaatgat tttaaatgga atacatacaa tgacatacct
     2461 gttgtaatat acggacagga ggatggaatg gttactatga tgtctcttga tggtaaaaca
     2521 tatcataaag cgtatctaac agcgaataaa gagttaactt ttaagttagt agttcccact
     2581 tatgaagaaa aggttctgct tctttataaa gataataata ttgaaataga attaactgga
     2641 gatccgataa attatcaatt caaaaaaaac aggtatgaaa actaattata aaaaatcaaa
     2701 gcttctgata cttgcaactg gtttatgttt actaataaca ggacaacttt ttgctactga
     2761 ttattataca gttcaggatg gtaattggaa taactccaat acttggcaaa acgggcaaaa
     2821 accaccagaa aaagatattc cttccagtgc aaatatctat ataaggcata ctgtaaatcg
     2881 caacagtaat gatgacctga agaatgatgg attaattcat gttgaaccta ttaccggaac
     2941 aaccgcaaaa ctgattctta agcaagttaa cgtttataac caaaataatg gaataattaa
     3001 agttattgat ggttattggc aaaactacag atttaatgga ggaggagaca gtggccaatc
     3061 cagaaatggt aatttttaca attcggatga tgcatacctt gaggtaatta atggtgtaat
     3121 ggaaacagca caaaattgga aaaatgagaa agactcaaag gcatactatg aaaattcttg
     3181 cattttaatg ggagaaaatt accaagtgga tattgataag attactggaa gccactttga
     3241 aatatataaa aattcgaata tctcgctggg atggcacggt agtggaaatt ttcaacaaga
     3301 taaaggtaaa attgattatg atggaacaag aatccaatta gcaggaacat caggtaactt
     3361 tcagttaagt gatggtgaag ttgatggatc gattacatta attactttta agaatcatga
     3421 taataataat gttggaggag gagaaattca aacttcatca agtattagcg gcactactga
     3481 tctcgattat tactgggcac aaaatgcagg taaactcgac gatcagggaa atgtatttac
     3541 aggcaataaa acttttcagg atattaccag tcagtatttt cctaatgatt gcggaccggg
     3601 aagttctcct gagtgtgatg ttgcaattac taaagttgcc tctaacagtg atcttgaacc
     3661 aggtgatacg tttacctata cattaacagt aacaaataat ggaccat
//
LOCUS       DASCQP010000064         2572 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000238798, whole genome shotgun sequence.
ACCESSION   DASCQP010000064 DASCQP010000000
VERSION     DASCQP010000064.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2572)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2572)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2572
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000238798"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1304)
                     /locus_tag="QF480_01035"
     CDS             complement(<1..1304)
                     /locus_tag="QF480_01035"
                     /inference="COORDINATES: protein motif:HMM:NF013736.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HJN05175.1"
                     /translation="MSNIDISVLLVEDDKILRSVYTEIIGMHVSKLYTADNGNQGYDS
                     YLKNKPDLILTDIKMPVMNGIEMIAKIRENDKAIRIIIISAYSDSHFFLNAIETGVKG
                     FLIKPVVTADLLNIIRDQANDILLEKRLKEEATKRRAAEKELDKGESILRALSQATAI
                     FFSKGVNDQTVNNILKLIGEAADVSRGYIFKLHEKNENEYISQIYEWVAQGIVPQIHN
                     EDLQDIITDDPIFLPWKKKMSNRQNILGLINDFDEPTKTILMEQDICSLLAIPIYVKN
                     SWWGFIGFDDCVSNRIWSDSEINALEMLAFNLGGALYRREVEDKMTRLNASLEERVWE
                     RTKDLEQEVVERTIAENLLRDSEEKYRLIYENANDGILLIVNNIISLVNPKFIEIIGM
                     LPNKVIGTMFSSLVKTEFVEKVDKYFNPKDENDEVTSEMQVQ"
     gene            complement(1320..2546)
                     /locus_tag="QF480_01040"
     CDS             complement(1320..2546)
                     /locus_tag="QF480_01040"
                     /inference="COORDINATES: protein motif:HMM:NF019533.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1684 domain-containing protein"
                     /protein_id="HJN05176.1"
                     /translation="MSKKKFQLFRKRNCTRPTLLGWVIILLFLAVIFRLSLVAVYYFL
                     AVNNSVNSKTLVLEGFAPTYVVKDALKYYKENEFDRLIVTGIPIVNYEFIAPYKNTAL
                     ATMTAIRKFGFNDTVYIADIPTNILIDRTYNTAVATKMLFDENNWPKNFDIYSVGVHA
                     RRSRMMFRKVFGSDYDIGIISHQDRTFDPNHWWRNSKGFRNVSNEFVATLYVMMFFHP
                     DFDKSKANVELGNYIDSIQYSREDKYTEFTDSTSSRFNAKEREDFHELVYFKPDINYK
                     IEAQFVVDTTVPVFEMKTTTSRTPTYRTYGYLDFVINDTSYRLTAFQNMAYKDNPIYG
                     GSLFVPFKDLTNTISTYGGGRYIDIPIPISNHLVLDFNEAYNPYCAYFDRWSCPVVPF
                     ENHLDVEIQAGEKKYK"
BASE COUNT          810 a          500 c          366 g          896 t
ORIGIN      
        1 aattgaacct gcatttcact tgtcacctcg tcattttcat ctttagggtt aaaatactta
       61 tctactttct cgacaaattc agtttttaca agtgatgaaa acatagtacc aattacctta
      121 tttggcaaca ttccaataat ttcaataaac ttagggttaa ccagagaaat aatattattt
      181 acaatcaaga gtattccatc attagcgttt tcataaataa gtctgtattt ttcttcgcta
      241 tcacgaagga gattttcagc aattgtacgt tccacaacct cctgttcaag gtcttttgtt
      301 cgctcccaaa cccgttcttc tagtgaagca tttaatctgg tcatcttatc ctctacttcc
      361 cttctgtaaa gagcccctcc aaggttaaaa gcaagcatct cgagggcgtt aatctctgaa
      421 tctgaccaaa ttctattgct gacacaatca tcaaaaccaa taaaacccca ccaactattt
      481 ttcacatata ttggtattgc aagtagagag cagatgtcct gttccattag aatagttttg
      541 gtgggttcat caaaatcatt aatgagccct aatatgtttt gccggttact cattttcttt
      601 ttccatggta aaaaaattgg atcgtctgta atgatatctt gaaggtcttc attatgtatt
      661 tgcggaacta ttccctgtgc aacccactcg taaatttgac ttatatattc attctcattt
      721 ttttcatgta acttaaaaat atatcccctt gaaacatctg ccgcttctcc aattaatttt
      781 agtatattat ttacagtttg gtcattaaca cccttactaa aaaagattgc agtagcttgc
      841 gacaaagccc ttaatatact ctctccctta tcaagttctt tctcagctgc tcgtcttttg
      901 gtggcctctt ctttgagtcg tttttcaaga agaatatcat tagcctgatc tctaataata
      961 tttaacaagt cggcagttac aaccggtttt ataagaaaac ctttaacacc tgtttcaatt
     1021 gcatttaaaa agaaatgtga atcactatag gccgaaatta ttataatacg tatagctttg
     1081 tcattttccc tgatcttagc aatcatttca atgccattca tcaccggcat cttaatatct
     1141 gttaatatta ggtcgggttt attcttcaaa taactatcat atccttgatt cccattatca
     1201 gcagtatata attttgaaac atgcataccg atgatttcag tatagacact tcgaagaatc
     1261 ttatcatctt caactaataa taccgaaata tcaatatttg acattatttg atcttttaac
     1321 tatttatatt tcttttcacc agcttgtatt tcaacatcca aatgattctc aaatggtacc
     1381 accgggcaag accatctgtc aaaataagca caataaggat tgtaggcttc attaaagtcc
     1441 agaacaagat gatttgagat aggaatagga atatcgatgt atcttccacc accgtacgta
     1501 ctaatcgtat tggttaaatc cttaaaaggc acaaacaaac tacctccata tatcggatta
     1561 tctttataag ccatattctg gaaagctgtt agtcgataac ttgtatcatt aatcacgaag
     1621 tctaaataac cgtatgtacg ataagttggg gttcttgaag tagtagtttt catctcaaat
     1681 acaggtactg ttgtatcaac cacaaattga gcttcaattt tatagtttat atctggtttg
     1741 aaatatacta actcatgaaa atcctctctt tcctttgcat taaatcggga agatgttgaa
     1801 tctgtaaatt cagtatactt atcctctcgg ctatattgta tactatcgat ataattacct
     1861 aactcaacgt ttgcttttga tttatcaaaa tcaggatgaa aaaacatcat aacatataat
     1921 gttgcaacaa attcattgct aacatttcga aatcctttgc tattcctcca ccaatgatta
     1981 gggtcaaaag ttctgtcttg gtgggaaata atgccaatat cataatctga accaaaaacc
     2041 tttctaaaca tcatcctact tcggcgagca tgaaccccaa ccgaataaat gtcgaaattc
     2101 tttggccaat tgttctcatc gaatagcatt ttggtggcaa ctgctgtatt ataggttctg
     2161 tcaatcagaa tattcgttgg aatatcagca atgtaaacgg tatcattaaa accaaatttt
     2221 cttatagcag tcatggttgc caaagctgta tttttataag gtgctataaa ttcatagtta
     2281 acaattggaa tccctgttac aattaacctg tcaaattcat tttctttgta atacttaagt
     2341 gcatccttta ctacatatgt tggtgcaaat ccctcaagta caagtgtttt tgaattaacg
     2401 gagttattaa ctgccaaaaa gtaatataca gcaactaatg acaatctgaa tattactgct
     2461 aagaataata ggattattac ccaacctaat aacgttgggc gagtacaatt tctctttctg
     2521 aaaagttgga atttcttttt tgacatttat tcaatcgtgg gtaacgaatt ca
//
LOCUS       DASCQP010000065         2990 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000239186, whole genome shotgun sequence.
ACCESSION   DASCQP010000065 DASCQP010000000
VERSION     DASCQP010000065.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2990)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2990)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2990
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000239186"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..685)
                     /locus_tag="QF480_01045"
     CDS             complement(<1..685)
                     /locus_tag="QF480_01045"
                     /inference="COORDINATES: protein motif:HMM:NF001030.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HJN05177.1"
                     /translation="MSGHSKWSTIKRKKGALDAKRSKIFSKIIKEITVAVKEGGAEPD
                     ANPRLRVAISNAKGVSMPKDNIERAISKGKDKDSSAFTEPTFEGYLSHGIAVFIECTT
                     DNNQRTVSNIRSIFSRYGGSLGTNGSLSFMFDHKGVFVVPVADLDQDEFEMELIDAGA
                     EELELEDDGFFHITTSLEDFGAMAKKLEELNVEPESAELQRIPTDTKTLDTAEALKII
                     KVIDLFEDDD"
     gene            complement(863..2458)
                     /locus_tag="QF480_01050"
     CDS             complement(863..2458)
                     /locus_tag="QF480_01050"
                     /inference="COORDINATES: protein motif:HMM:NF022441.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head GIN domain-containing protein"
                     /protein_id="HJN05178.1"
                     /translation="MKKVSLRAVLILSAFLFIIPLNAQFIRGNGEVTKQMHNVENFDA
                     IKVGGARTVILTQGDSVSVVVETDSNLQEYITLEVKDGTLHFGFKSKKIMKYKVLKFY
                     ITAPDYKSIRVSGASKVVSTGTLNGDQLQLSTSGASDLKLDVDYKNIITRVSGASDVM
                     LSGTTTSNEVTCSGASEFHGKNLASDIVVAIVGGASNCFVDAKSNLTYDVSGSSEFQY
                     KSTPETVVVKKGKAGNDVIVLSNTNFISKHHAYPDTTDVSVGSLNFTVVDGDTTLVTV
                     GRHTLVVSDNGDVKWRKSNRDKFNGHWGGFELGLNGYLTPDFNMSFDTKDDYLSLQME
                     KSINVNLNIYEQNISLNKGKNIGLVTGIGVSWNNYRFSKPTYLTNDSSAIAGYYMNGV
                     SVRKTKLTAMYITVPLFFEIQTKNERRINQFHFAVGALINARISTHTKIYFNEANKAY
                     NLLDPVSGNIVANGLTPTGGSRNIVKDFNSFHLAPFKFDVSVRFGYGIINLYATYSLN
                     TMFQENRGPELYPFTAGITLVGW"
     gene            complement(2559..>2990)
                     /locus_tag="QF480_01055"
     CDS             complement(2559..>2990)
                     /locus_tag="QF480_01055"
                     /inference="COORDINATES: protein motif:HMM:NF014841.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HJN05179.1"
                     /translation="AYDKYKYNFTDEYVKEATMQELFERSDIVSLHIPLTDETEYLIN
                     NDFINRFRNNIYIINTSRGRVLNTNDLLKNMRTGKLLGACLDVLEYEDLSFENVNLHD
                     DFTSLVSMKNVILTPHVAGWTHESNFKMAVVIADKVRLLDL"
BASE COUNT          930 a          597 c          464 g          999 t
ORIGIN      
        1 cgtcgtcgtc ttcaaataga tcaataactt ttattatttt tagtgcttct gctgtatcga
       61 gtgtttttgt atctgtaggt attctttgta attcagccga ttcaggctct acatttaact
      121 cttcaagttt ctttgccatt gcaccaaaat cttctaatga tgttgtaata tgaaaaaagc
      181 catcatcttc taactcaagc tcttctgcgc cggcatcgat aagttccatt tcaaactcat
      241 cctgatcgag atcagcaaca ggaacaacaa atacgccttt atgatcgaac ataaagctca
      301 atgatccatt ggtacctaga ctgcccccat atctactaaa aattgaacga atattagaca
      361 cagtccgttg attattatca gttgtacact caatgaaaac agctattcca tgagataaat
      421 agccttcaaa tgtgggctca gtaaatgcag aactatcttt atcttttccc ttactaatgg
      481 ctctttcaat attatctttg ggcatactca cacccttggc atttgaaata gccaccctta
      541 accttggatt cgcatctggt tcagcaccgc cctccttaac cgcaaccgtt atttccttta
      601 tgatctttga aaatatttta gaccgttttg catctaaagc accttttttc ctcttaattg
      661 ttgaccactt actatgtcct gacattgttt ttgatgttta cattactaaa caatatgatg
      721 atagagtatt tctctgcaag caaaattaat aaattccatg ctatgtgaaa agcaacgatt
      781 caataaaaaa ccatctggat ataaaaacag tatccctgct gaaaaacaac agggatacgc
      841 agtagatatt ttaagaaagt tattaccagc caactaaagt tatcccagct gtgaatggat
      901 ataattcagg tccgcggttt tcttggaaca ttgtatttaa ggaataggtg gcatataaat
      961 taataattcc ataaccaaac cttactgata catcaaactt aaagggcgca agatgaaagc
     1021 tgttaaaatc ctttactata tttctggatc cacctgttgg agttaaacca tttgcaacaa
     1081 tatttcctga gacaggatca agcagattgt aagctttatt agcttcatta aaatagattt
     1141 ttgtatgtgt gcttattctt gcatttataa gggcacctac tgcaaagtga aactgattaa
     1201 tgcgtctctc attttttgtt tgtatttcaa aaaataatgg tacggtaata tacattgctg
     1261 ttagcttagt tttcctaaca gaaacaccat tcatgtaata acctgcaata gcagaactat
     1321 catttgttag ataagttggc ttgctaaatc tgtaattatt ccatgaaact ccaataccag
     1381 ttaccaaacc tatattttta cccttattca atgagatatt ttgttcataa atatttaggt
     1441 ttacatttat cgatttctcc atttgtaatg acaaataatc atcttttgtg tcaaaactca
     1501 tattaaaatc cggagttaaa tatccattaa gacctagttc aaatcctccc cagtgtccat
     1561 taaatttgtc tctatttgat tttctccatt tcacatcccc attatccgag accaccaaag
     1621 tgtgccttcc tactgtaacc agtgtagtat caccatcaac cactgtaaaa tttaatgaac
     1681 ccacgctaac atctgtagta tcaggataag catgatgttt tgaaataaag tttgtattag
     1741 aaagtacaat aacatcgtta cctgctttac cttttttaac aacaactgtt tcaggtgttg
     1801 atttatattg aaactccgag gatccggaaa catcataggt cagattggat tttgcatcta
     1861 caaaacagtt acttgctcca cctactatgg caacaacgat gtctgatgca agattcttgc
     1921 catgaaattc agaggctcca ctgcaggtga cctcattgct tgttgtcgta ccactcaaca
     1981 taacatcgga tgctcctgac acccttgtga taatattttt ataatctaca tcaagtttta
     2041 ggtcagaagc accactagta cttaattgaa gttgatcacc gtttaatgta cctgttgaga
     2101 caaccttcga agctcccgac actcggatgc tcttataatc cggtgcggtt atataaaact
     2161 tcagcacttt atacttcata atcttttttg atttaaaacc aaaatgcagg gtgccatctt
     2221 taacttctaa agtaatatac tcttgcaggt tcgagtctgt ctcaaccaca acagaaacgc
     2281 tatcaccttg agtaagaatt actgttctgg ctccaccaac tttaatggca tcaaaatttt
     2341 caacattatg catttgcttt gttacttcac cgttgccacg gataaactga gcgttaagtg
     2401 gtataatgaa tagaaatgcg gatagtatta atactgcgcg taaactaact tttttcatga
     2461 tttaaattat attagtgaat ttgctcgtat gacgggtaaa ggatcctgtt tgttacaggg
     2521 ataagaaaaa aagttcaggc aacaaattca ttggtcaact acaagtcgag taaccgaact
     2581 ttatcggcaa taactacagc cattttaaag ttggattcat gagtccagcc agctacatga
     2641 ggtgtcagga taacattttt catggaaaca agtgaggtaa aatcatcatg taggttcaca
     2701 ttttcaaatg aaagatcctc gtattcaaga acatcaaggc aggcccccag taacttacca
     2761 gtcctcatgt ttttcaatag atcgtttgta ttgagaactc tgccacgtga tgtgtttatt
     2821 atataaatat tattcctaaa tctattaatg aaatcattat ttatcaaata ttctgtttca
     2881 tccgtcaagg ggatgtgtaa actcacaata tcgcttcgct caaaaagttc ttgcattgtt
     2941 gcttctttaa catactcgtc agtaaaattg tatttgtatt tgtcataagc
//
LOCUS       DASCQP010000066         1667 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000246892, whole genome shotgun sequence.
ACCESSION   DASCQP010000066 DASCQP010000000
VERSION     DASCQP010000066.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1667)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1667)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1667
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000246892"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            599..>1667
                     /locus_tag="QF480_01060"
     CDS             599..>1667
                     /locus_tag="QF480_01060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008657267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HJN05180.1"
                     /translation="MLNKIIRFFLENKLVTILIILVFIAWGIVTSPFGWDTAFLPSDP
                     VPVDAIPDIGENQQIVYTEWPGRSPQDIEDQISYPLTTALLGMPGVKTIRSNSIFGVS
                     SIYIIFEDDIEFYWSRTRILEKLNSLPAGTLPDDVSPALGPDATALGQIYWYTLEGRD
                     KDGNPSGGWDPQDLRTIQDFHVRYALTAASGVAEVSSIGGFVKEYQIDIDPNAMKAHG
                     VNVAQIMAAVKNSNLDIGARTIEFNRVEYLVRALGYIENLEDLEKSVVAVRNNVPIRL
                     KDVAKINFGPATRRGGLDKGGSEAVGGVVVARYGTNPLEAIENVKAKIAEIAPGLPAK
                     TLKDGTISKVTIIPFYDRTGLI"
BASE COUNT          547 a          260 c          341 g          519 t
ORIGIN      
        1 gccattagtt tataatatag ttcatgtaac attttttaac aatttatgta gaatatagtc
       61 gatttaatat tgtttatttg tagaatatta aaatttaatg tttaggaaaa tatcacatat
      121 aatcttcgca atattgttgt taacaacaac gatgggattc tctgtatcta aacattactg
      181 tggtgcacgg ttaattgaag tatctataaa ttctacgatt gaaccatgtt gtgaagatgg
      241 tgggacatca ggctgttgcc acgatgaaac ggaatactat agatttgata aaaatttcgt
      301 aggcccaatt attattgagg ataataaaat taccgacatt gatattctgt ttccttctct
      361 attcatatgt ttattgaacg agccggtgat gattgaaagt gaaatattaa atttcgctga
      421 atcaccgcca ccgctcacct tacataccaa attatctttg tttcagacat atctgatttg
      481 atattctatt tattgattga tgaattgtaa tcgtcaatag cttttggcta tatgatgagt
      541 tacattctga atttattgtt tttaagcaat acgtacatca attataaatt gaatagatat
      601 gttaaacaaa ataattagat tctttttaga gaataaactg gtaaccatac taattattct
      661 tgtgtttatc gcatggggca tagtaacctc accatttggt tgggatactg cattcttacc
      721 gagtgatccg gtacctgtag atgcaatacc tgacatcggt gagaatcagc aaatagtata
      781 tactgaatgg ccaggcagat ctccgcaaga tatcgaagac cagatatcct atccattaac
      841 aacagcattg ctgggaatgc caggagtgaa aactattcgc agcaactcca tttttggtgt
      901 ttcaagtatt tacataattt ttgaagatga tatagagttc tactggagtc gtacccggat
      961 attagaaaag ctaaattcat taccggcagg aacacttcct gatgacgtta gtcctgcatt
     1021 ggggcctgat gcaacagctc ttggtcaaat atattggtac acacttgaag gaagagataa
     1081 agatggtaat ccttccggtg gatgggaccc acaagattta agaactattc aggattttca
     1141 cgttcgatat gcattaactg cagcatcggg agttgcagaa gtatcatcaa taggaggatt
     1201 tgttaaagaa tatcagattg atatagatcc caatgctatg aaggctcacg gtgtaaatgt
     1261 agctcaaata atggctgccg tgaagaatag taatctggat ataggtgcca gaaccattga
     1321 gtttaacagg gttgaatatc tggtaagggc attaggatat atcgagaatc ttgaggattt
     1381 agagaaaagt gtagttgctg tacgaaacaa tgtaccgatc agactgaaag atgttgccaa
     1441 aattaatttc gggcctgcaa cacgaagagg agggcttgac aaaggaggat cggaagcagt
     1501 aggaggagtt gtagtagcac gttatggtac caatccattg gaagctatcg aaaatgtaaa
     1561 ggctaaaatt gctgaaatag ccccaggttt acctgcaaag actttaaagg acggaacaat
     1621 ttctaaagtt acgattatac cattttatga tagaaccgga ttaataa
//
LOCUS       DASCQP010000067         1520 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000249494, whole genome shotgun sequence.
ACCESSION   DASCQP010000067 DASCQP010000000
VERSION     DASCQP010000067.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1520)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1520)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1520
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000249494"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..181)
                     /locus_tag="QF480_01065"
     CDS             complement(<1..181)
                     /locus_tag="QF480_01065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05181.1"
                     /translation="MNEEKKHTIDAVEEYSDELKLSHIENGIDLETFEYKESGDFKNF
                     PTNIFPEKIENLIDVL"
     gene            complement(174..536)
                     /locus_tag="QF480_01070"
     CDS             complement(174..536)
                     /locus_tag="QF480_01070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05182.1"
                     /translation="MANINNKPDIDIINRFTDKLFSLKKLSFLFPLYEDVLQTIKSIY
                     RYIEHLEGNNTKLTIELNQEREKREKLQVHIALMQVEMNKNLLFPSMPYFKDADISQY
                     FIKDESYHEQFKIAYNHE"
     gene            complement(649..981)
                     /locus_tag="QF480_01075"
     CDS             complement(649..981)
                     /locus_tag="QF480_01075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05183.1"
                     /translation="MEEEFDYAEARQLKRLRADVRRLFKEAEKNPNKEAVKLLGFSFG
                     TTESQLNKAFEQLEDITNTVYLIKNGIPGGAEKQTGEAEKQTGETHIEFTNRMQMQMS
                     NTSATVIE"
     gene            complement(983..1177)
                     /locus_tag="QF480_01080"
     CDS             complement(983..1177)
                     /locus_tag="QF480_01080"
                     /inference="COORDINATES: protein motif:HMM:NF024139.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HJN05184.1"
                     /translation="MSEPRQYLRADDVAKKLGVSTSTIRKYVLTKKIPYIKMEGSRGS
                     LLFDEMEIDTWLKSKRVDVQ"
BASE COUNT          405 a          293 c          205 g          617 t
ORIGIN      
        1 aaagtacatc tattaaattc tcaatctttt caggaaatat gtttgtagga aagtttttaa
       61 aatccccgct ttccttatac tcaaaagttt ctaaatcaat accgttctca atatgtgata
      121 actttaattc atctgagtat tcctctacgg catctatagt atgtttcttt tcttcattca
      181 tgattgtagg caattttaaa ttgttcatga taactttcat ccttaataaa gtactgtgaa
      241 atgtccgcgt ctttaaagta cggcatggaa ggaaacaata gatttttatt catttctacc
      301 tgcatcaatg caatatgtac ttgcagcttt tcacgttttt cacgctcctg gttaagttct
      361 attgttagtt tggtgttgtt accctccagg tgttcaatgt atctgtaaat cgattttatt
      421 gtttgcagta catcttcata taatgggaat aggaaactaa gttttttaag actgaataat
      481 ttatcggtaa acctatttat tatatctatg tccggtttat tgtttatatt tgccatatca
      541 tctggttata tcgttatatc atttggttat atcgttatat catttgttac acttgcatca
      601 aaaaatatta gcctggttcc tcccaaagtt gccaggcttt ttttatctct attctataac
      661 tgttgctgat gtgttactca tttgcatttg catcctattt gtaaattcaa tatgtgtttc
      721 tcctgtctgc ttctctgctt ctcctgtctg cttctctgca cctccaggaa taccgttctt
      781 tataagataa acagtattgg ttatatcttc caattgttca aatgctttgt ttagctgact
      841 ttctgttgtg ccaaaactaa atccaagcaa cttaactgct tccttatttg ggtttttctc
      901 tgcttcctta aatagcctac gaacatctgc ccttaatcgt tttagctgcc ttgcttcagc
      961 atagtcaaat tcttcttcca tattattgca cgtcaactct tttacttttt agccaggtgt
     1021 caatttccat ttcatcaaat agtaatgatc ccctgctacc ttccatttta atgtatggta
     1081 tctttttggt tagaacatac tttctaattg tggatgtgga aacgcctaat ttcttcgcca
     1141 cgtcatccgc tcttaaatat tgccttggtt cactcatgat gattgatttt tgtgtctgtc
     1201 aaaaatagcc acatattacc atattatatt tgcatccact cataattata aacagcgatt
     1261 agttaataac cttattaata ttatttttgt ttttatataa tactgaatta cagatgatta
     1321 aaatttgata agtattattt attcattaaa tttacacccc acctgtatga aagcattgta
     1381 aacactggaa tgtcactttc tacattagaa agtgattcct gacttaaata ttctcacacc
     1441 cattcttttt gcgttatcca atactcaggt ggtacattaa ctgcaccctc tatttcaata
     1501 ctctttttag ctttgcttac
//
LOCUS       DASCQP010000068         6348 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000250299, whole genome shotgun sequence.
ACCESSION   DASCQP010000068 DASCQP010000000
VERSION     DASCQP010000068.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 6348)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6348)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6348
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000250299"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1280)
                     /locus_tag="QF480_01085"
     CDS             complement(<1..1280)
                     /locus_tag="QF480_01085"
                     /inference="COORDINATES: protein motif:HMM:NF025910.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HJN05185.1"
                     /translation="MFGKIYSYLLLLILISGLAITDAIAQNNQQVNPVLTRKNQKERN
                     PKETLAINFYREKKYQKAAELFQQLYKTKQSNYYYNYLFNCLIATKNYKQAERVVKQQ
                     KKSNPGNYRYMIDEAYVAGLSGNKKKSNKILDKIINNLPTQRNQIIQITSSLQSKGFA
                     DMAIKVFQKAKLMPGSNYEYNFEMANAYLFSGDYDKMFDSYIRQLEKTPVDIQRIKNK
                     LQYVMRVDVNSNLSVMLKQKLLQSSQQNPDNLQLAEMLLWYSLQTKDFSMAFRQAKSI
                     DMRFGNRDKDMLELADIAFSNYDYDISTQAYEYVKNKKNNTPFFADSYVGYFLSHVKQ
                     VEENPNSNQKDFKELEKMGIAAINTLGINNITSDIIVNLAHITAFNLSKPNEAIEMIE
                     KALLNPAINKNKEAYLKLKLADILVTNGNIWDATL"
     gene            complement(1286..1849)
                     /locus_tag="QF480_01090"
     CDS             complement(1286..1849)
                     /locus_tag="QF480_01090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05186.1"
                     /translation="MTSLTNAEKVISLSMRSLIIYIAFLTTMLISCNYHSNQEYTTRI
                     DSLSSQLEKAVEGYSVIDSATIAEIRENVNSNCNSIDFEVDSNFNKLIIPYSQISKSI
                     KQILKMDFHIKKEIQNSRAQISNLLHDVKNNHIDTTLLIKYIEEEKKAVNIIINRMKF
                     NRLRVISETKRYDSLNPLIVERINKNN"
     gene            complement(1833..3106)
                     /gene="serS"
                     /locus_tag="QF480_01095"
                     /pseudo
     CDS             complement(1833..3106)
                     /gene="serS"
                     /locus_tag="QF480_01095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005874225.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004828 - serine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006434 - seryl-tRNA aminoacylation
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
     gene            complement(3223..3492)
                     /gene="rpmA"
                     /locus_tag="QF480_01100"
     CDS             complement(3223..3492)
                     /gene="rpmA"
                     /locus_tag="QF480_01100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013444797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HJN05187.1"
                     /translation="MAHKKGMGSSHNGRESASKRLGVKIYGGQAAIAGNIIVRQRGTV
                     HNPGLNVGMGKDHTLFALVDGVVEFRKKRDNRSYVSVSPIDADTN"
     gene            complement(3528..3839)
                     /gene="rplU"
                     /locus_tag="QF480_01105"
     CDS             complement(3528..3839)
                     /gene="rplU"
                     /locus_tag="QF480_01105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012573560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HJN05188.1"
                     /translation="MYVVVDIAGQQFKVEQGQEVFVNRLEGEEGEKVKFEKVLLVDND
                     GKIKVGKPLVKGAAIDAQIISHLRGDKVVVFKKKRRKGYQKSNGFRQDLSKVLIEKIT
                     V"
     gene            complement(3922..4860)
                     /locus_tag="QF480_01110"
     CDS             complement(3922..4860)
                     /locus_tag="QF480_01110"
                     /inference="COORDINATES: protein motif:HMM:NF013088.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HJN05189.1"
                     /translation="MSQNKNLISWSILVSLMLVWGSSFILIKKSLDYFSPTEVGILRI
                     TVTFISLVPIALIKLKKIDRKHRNYLIISGLIGSLIPSFMFAIAQTGISSSMAGILNS
                     LTTLFTLGLGLAFFKIKASWFNVLGVFIGLFGAVGLIYVSSGEQGFVFNIKYASLIII
                     ATICYAFNVNFIKRYLKEIDSLAITALTFFYIGIPSLAYVLIFSDIPNKLLHEKDSLT
                     GLGYISILSVAGTSIALIAFNKLIKTSTPVFASSVTYIIPLVAIAWGIIDGEVFKPIY
                     ILWFILILTGVLMVNTTSHNHVKSVLIRMFSRKQKN"
     gene            5146..5727
                     /locus_tag="QF480_01115"
     CDS             5146..5727
                     /locus_tag="QF480_01115"
                     /inference="COORDINATES: protein motif:HMM:TIGR02985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma-70 factor"
                     /protein_id="HJN05190.1"
                     /translation="MIDNNDRLIEGLKKGDKSIFEEVYREYYIPLCYYSLKYVEKIED
                     SEEIVQNLFLKLWEKHEELEINSSLKAYLYRAIQNYALNFLGKKKTIEKYVLHQEWQS
                     YDNSENGLQKLETEELSIILKHALLRLPEKRRRIFELSRFDGMKYGIIALQLSISVKT
                     VETQMTKALKYLRVILKEYVPLLAFFMLTNNIL"
     gene            5851..>6348
                     /locus_tag="QF480_01120"
     CDS             5851..>6348
                     /locus_tag="QF480_01120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05191.1"
                     /translation="MNRELSIQKLVSYLTGNSSVKDEKKVEEWLTMSNENMMLVDDFK
                     QVWDATTVKNDPCLIDIDSTWEDFIRRTNFSETQSIKIADNKKPSNTRVILNYSIRVA
                     AMIVIVFGFYFLINKEKSVDTIMHTAALAQLDSPTVLPDGSNVTMNKGANIDYPERFT
                     SDTRNI"
BASE COUNT         2033 a         1081 c         1004 g         2230 t
ORIGIN      
        1 agtgtggcat cccaaatatt accgttagta actaaaatat cagcaagttt tagctttaaa
       61 tatgcttctt tatttttgtt aattgcagga tttaacaatg ccttttcaat catctcaatt
      121 gcctcatttg gttttgaaag attgaaagca gtaatatgcg caaggtttac aattatatcg
      181 gaggtgatat tgttgattcc caatgtgttg atggcagcaa tacccatctt ttcaagttct
      241 ttaaaatctt tttggtttga atttgggttt tcttcaactt gttttacatg ggataaaaaa
      301 tacccaacat aactatcagc aaagaaaggt gtgttatttt ttttgttttt tacatattca
      361 tatgcttgag tgctgatatc ataatcataa ttagaaaaag ctatatcggc aagttcaagc
      421 atatctttat cccggtttcc aaacctcatg tcaatagatt ttgcctgtct gaacgccatt
      481 gaaaaatctt ttgtttgtag ggaataccat aataacattt cagccaactg taagttatcg
      541 ggattttgct gagaactttg aagcaacttt tgtttaagca tcactgataa attgctatta
      601 acatccaccc tcattacata ctgcaattta ttcttgatgc gctgaatatc aaccggagtt
      661 ttctctaatt gccttatgta actatcgaac attttgtcgt aatcgccact aaataaatat
      721 gcattcgcca tttcaaaatt atattcatag ttgctcccag gcatcaattt tgctttttga
      781 aaaactttaa tagccatatc agcaaagcct ttcgattgta aactcgatgt aatttgaata
      841 atttgatttc gttgcgttgg caggttatta ataattttgt ccagaatttt gttagatttt
      901 tttttatttc ctgataatcc tgcaacataa gcttcatcaa tcatgtacct gtaattacct
      961 gggtttgatt tcttctgttg tttaaccaca cgttcggctt gtttataatt ctttgtggcg
     1021 ataaggcaat taaacaaata attgtagtag taattacttt gcttggtttt gtataactgt
     1081 tgaaatagct cagcagcttt ctgatatttt ttttctctat agaagtttat ggctagtgtt
     1141 tctttaggat ttctctcttt ttgattcttc ctggttagca ccgggttaac ttgttgattg
     1201 ttttgcgcaa ttgcatcagt aatagctaat cctgaaatta aaatcagaag taataagtaa
     1261 ctataaatct tgccgaacac gctcctcaat tattcttatt tattcgttct acaataagtg
     1321 gatttagcga atcatatctt tttgtttcgg aaatcactct taaacggtta aacttcattc
     1381 tgttgattat tatattaacg gctttttttt cttcttcgat atattttatt aataaagttg
     1441 tgtcaatatg attgttttta acatcatgaa gtaagttact aatttgtgcc ctcgaatttt
     1501 ggatttcctt tttgatatga aaatccattt ttaatatctg ttttatcgat ttgctaatct
     1561 ggctgtaggg gataatgagt ttattaaaat tactgtcaac ctcaaaatca atactattac
     1621 aattcgaatt aacgttttct cggatttcag caattgtggc actatcaatt actgaatatc
     1681 cttctactgc cttttcgagt tgtgaactta agctgtcgat acgtgttgta tattcctgat
     1741 tgctgtggta attacacgaa atcagcatag tagttaagaa ggctatgtag ataattaatg
     1801 atctcatact tagtgaaatg actttttcag cgttagttaa tgatgtcaaa tttagtatag
     1861 cttctcaaca cctcaggaat tacaactccc tcaggagttt gattattttc caatagcgca
     1921 gccactattc gtggaagtgc taatgcacta ccattaaggg tatgtgcaag tcttgatttt
     1981 ccattttcat ctttaaacct aagttttaat ctatttgcct gaaaattttc aaaattagaa
     2041 actgagctca cttcaagcca ccgctcctga gctgctgaaa aaacttcaaa gtcgtatgta
     2101 agggccgaag taaaactaag atcgccacca caaagcctta caatcctgaa tggcaattcc
     2161 agcttcctga gtagtgcagc aatctgatct ttcatttcct caagggtatt atatgatttc
     2221 tcaggatgtt gaatttgaac gatttcgact ttgtcaaact gatgcaatcg gttaagtcct
     2281 ctaacatctt tgccatatga tcctgcctca cgacgaaaac aactcgaata tgctacattt
     2341 ttaattggga aatccgcctc ctttagaata acatcacgat aaatatttgt caatggaact
     2401 tcggctgtag ggataaggta caagttgtca tcattaataa tatacatctg gccttcttta
     2461 tcaggaagtt gcccggtacc aaatcccgaa tcggcattta taagcaatgg aggttggtac
     2521 tctaaataac cttgatttat agcttcctcc aaaaagaaat ttatcaaagc tctttgcagt
     2581 tgtgcaccct taccgatata aaatggaaat cctgccccgg tgactttgct acccagatcg
     2641 aaatcaataa tattatattt tgaagcaagt tcccaatgag gtaatgcatc ttcatccagt
     2701 tcaagcaacc taccttcctc caggtgtatt aattcattat ttgcatctga attgccggaa
     2761 gggactgatg tatgtggtat gtttggcagt tcaattaaac tactgttcag tttattgaca
     2821 gtattactta atatttgttc gagctctttg gctttagttt tcagatttat cgaattcgct
     2881 tttgctactt ctgcttcgtc tcgttgtccg gaactatata gtttgccaat ttcttttgcc
     2941 agtttattgc ttgtagctaa tgtgtcatct aattctttct gtgttttttc ctcaggtcat
     3001 ctagttcaat aacttcatca acaattactg tggcatcgaa attttttatt gcgagccttt
     3061 ttataatgtc ggctttattc tctcttatat aattaagctg aagcatatct aaaatttttg
     3121 caaagttagt ttttaaaaac gtatgaatag tttcagataa aaataaaaaa accccgccaa
     3181 acggcagggt tttgtaattt attataactg atgtaacctt tgttagttag tatcagcatc
     3241 tataggtgac acactcacgt atgacctgtt atcccttttt tttctgaact ctacaacacc
     3301 atcaactaat gcaaataatg tatgatcttt acccataccc acatttaaac ccgggttgtg
     3361 tactgttcct ctttgtcgta caataatgtt accggcaata gcagcttgtc cgccataaat
     3421 tttaacacct agccttttac tcgctgattc gcgtccgtta tgggaactac ccattccttt
     3481 tttatgagcc attttttagt attttgagtc tgcctcaggc agacagttta aacagtaatc
     3541 ttttcaatta atactttact tagatcctgg cggaaaccat tagatttttg ataacctttt
     3601 cttctctttt ttttgaaaac aacaacttta tcacctctaa ggtgagatat aatctgggca
     3661 tctatagcag ctcccttaac taaaggtttg ccaactttta ttttgccatc attatcaact
     3721 aaaagaacct tttcaaattt aactttctca ccttcttcac cttcaagtct gttaacaaaa
     3781 acttcttgtc cttgttcaac tttaaactgc tgtccggcta tgtcaacaac tacatacatg
     3841 tcaaataatc tttagtttag tttccttaaa aatttggagg tgcaaaatta taaaaaaaaa
     3901 ctaattaaca actaaatgct gttaattttt ttgctttctc gaaaacatcc ttattagaac
     3961 agattttaca tgattatggg aagttgtatt taccataagc acacctgtca aaatgagtat
     4021 aaaccagagg atataaatcg gcttaaatac ttcaccgtca attattcccc atgcaattgc
     4081 aaccagcgga attatatagg ttactgatga agcaaaaacc ggtgtgctag tttttataag
     4141 tttgttaaaa gcaattaatg caatacttgt acctgcaact gatagaatgc taatataccc
     4201 taatcctgtt aaagaatctt tttcatgcaa taatttatta ggaatatctg aaaaaattag
     4261 tacataagct agagaaggaa ttccaatata aaaaaatgtt agggcagtta ttgccagcga
     4321 gtcaatctcc tttaaatatc tcttaatgaa attaacatta aacgcatagc aaatagttgc
     4381 aataattatt aaggatgcgt atttgatgtt gaacacaaaa ccctgctcac cagaactcac
     4441 ataaattaat ccaactgcac caaataaacc aataaacaca cctaatacgt tgaaccacga
     4501 agccttgatc ttaaaaaatg ctagccccaa acccagggtg aaaagagttg ttaatgagtt
     4561 tagtatacca gccatagaac tgctaatacc agtttgagct atagcaaaca taaatgaagg
     4621 aattaagctt cctattaaac cagaaataat aagataattt ctgtgtttgc gatctatttt
     4681 ctttagcttt attaaagcaa ttggtactaa agaaataaat gtgacggtta ttcttagtat
     4741 tccaacttca gtgggagaga aataatccag cgatttctta ataagtatga atgaactacc
     4801 ccaaactagc atcaatgaga ctagtattga ccaagatatc agatttttat tttgtgacat
     4861 gcttattaga aatgttgcgc aaaactatta aaatattgat taaacgcgat ttttttgatg
     4921 ctaggaaaaa cttattatga gattgaaatt attaacataa gaattaagat catctaaaat
     4981 gatgctagct tccaagattc gtcctcggta atcttttact gaatatcatt caacaatatt
     5041 ggagtttatt aaaattattg tatacatttg tatattctaa gttttaatta aagttctgat
     5101 attaccaagt tttaacataa gggggtaatt agctttcact tatttatgat tgataacaac
     5161 gatagactaa tagaaggatt aaaaaagggc gataagtcaa tttttgagga agtatatcgt
     5221 gaatattata ttccattgtg ttattattct ttaaaatatg ttgaaaaaat tgaagattcg
     5281 gaagaaattg ttcagaatct ctttttaaaa ctatgggaaa aacatgagga acttgaaata
     5341 aatagttctt taaaagcata cttatacagg gctattcaaa attacgcact aaattttctg
     5401 ggcaagaaaa aaacaattga gaaatatgta ttgcatcagg aatggcaatc ttatgataac
     5461 tcagaaaacg gacttcagaa actcgaaaca gaagaactta gtattatttt aaaacatgct
     5521 ctgctaaggc tacctgaaaa acggagaaga atttttgaac ttagccgttt tgatggaatg
     5581 aaatacggta taatagcact ccagttatca atttctgtga aaacggttga aacacaaatg
     5641 acaaaagcac ttaagtactt aagagtaatc ttaaaagaat atgtgccatt attagccttc
     5701 tttatgctga ctaacaatat attataacca ctttttttaa ttaaattgta gataaaagaa
     5761 aataaagtta aaaaaaatcg aatgtgcagt aagggtaaat gaatagttta ctgtcttaac
     5821 ataaagcgta ttattcgact aactagttaa atgaatagag aattaagtat acaaaaactg
     5881 gtatcttatt taaccggcaa ctcttcagta aaggatgaga agaaggttga agagtggtta
     5941 actatgtcga atgagaacat gatgttggtt gatgatttta aacaagtttg ggatgctaca
     6001 actgttaaga atgatccttg tttaattgat attgatagta catgggagga ctttattaga
     6061 cgcacaaact ttagtgaaac acaatctatt aaaattgctg acaacaaaaa accatctaat
     6121 accagagtaa ttcttaatta ttctatccgg gtggctgcaa tgattgtaat tgtgtttggt
     6181 ttttactttt taattaacaa agaaaaatcg gttgatacaa ttatgcacac cgcagctctt
     6241 gcgcaattag attcaccaac tgtccttcct gatggttcta atgttactat gaataaagga
     6301 gctaacattg attatccgga gcgttttact tctgatactc gtaacatt
//
LOCUS       DASCQP010000069         6774 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000256875, whole genome shotgun sequence.
ACCESSION   DASCQP010000069 DASCQP010000000
VERSION     DASCQP010000069.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 6774)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6774)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6774
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000256875"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..637)
                     /locus_tag="QF480_01125"
     CDS             complement(<1..637)
                     /locus_tag="QF480_01125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005863429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase U32 family protein"
                     /protein_id="HJN05192.1"
                     /translation="MTANDIEIMAPVGSYESLMAAIQGGANSVYFGIGNLNMRSKSSK
                     NFTLDDLIKISSICKENNVRTYITLNAVIYDSEIDTMQEVVDAANQNDITAIIASDQS
                     VIQYAHSVGMEIHMSTQTNITNIEAVKYYSQFADVMVTARELEIKQVKAITTAISEQN
                     ITGPSGELVQIEVFAHGALCMAVSGKCYLSLDNLNSSANRGECLQQCRRKYT"
     gene            complement(692..1306)
                     /locus_tag="QF480_01130"
     CDS             complement(692..1306)
                     /locus_tag="QF480_01130"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006842932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein signal peptidase"
                     /protein_id="HJN05193.1"
                     /translation="MKKSLIVILFVLIADQSLKFWVKLSMTLGEEIPIIGQWFNLYFT
                     ENNGMAFGLQFGGEFGKLFLSIFRILAIIAIAIYLILIIKRKRSNGLVISISLIFAGA
                     FGNIIDSAFYGMIFTQSTYHTLGTFAADGQGYASFLHGRVVDMLYFPIIDFTQADSPS
                     WLPSWIFGYDGHFIFFRPIFNLADSAITIGVAWLLIFERKNLSL"
     gene            complement(1313..1729)
                     /locus_tag="QF480_01135"
     CDS             complement(1313..1729)
                     /locus_tag="QF480_01135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005846592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TraR/DksA C4-type zinc finger protein"
                     /protein_id="HJN05194.1"
                     /translation="MKENNNGDSKKTKYLDSELEEFKQIIFAKLKKANQDFELLTEAY
                     SNNSEHGTNDTSPTFKVLEEGQQVLSKEENSRLAARQQRFITNLENALIRIENKTYGI
                     CRVTGKLISKERLKAVPHATLSIDAKNQMAKPNPIN"
     gene            complement(1831..5262)
                     /gene="ileS"
                     /locus_tag="QF480_01140"
     CDS             complement(1831..5262)
                     /gene="ileS"
                     /locus_tag="QF480_01140"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009134149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004822 - isoleucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006428 - isoleucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HJN05195.1"
                     /translation="MGTKYTEYAQLNLPQLAEEVRATWEKNDVFAQSLENRKGNEPFV
                     FYEGPPSANGVPGIHHVMARTIKDLFCRYQTLKGKYVERKAGWDTHGLPVEISVEKTL
                     GITKEDIGKKISVEDYNNACRKEVLKYKDLWDELTRKIGYWVDLDHPYITFDNKYIES
                     VWYLLKMLNEKDLLYKGYSIQPYSPAAGTGLSTHEINQPGCYRDVTDTTAVAQFKVIK
                     QDASHSIFADVEGDLFILAWTTTPWTLPSNTALAVGDKIDYIKVVTFNQYTGIPITVI
                     IAKDRLNSYFNEKNKDLSFDDYNHGDKKIPFKVVGEFKGFELTGLCYEQLFPWIKPMG
                     NAFEVIPGDFVTTEEGTGIVHVAPTFGADDDRVAKLMGIVPLVLIDKNGERRPMVDFK
                     GRFFNIDDLDSDFVNDFVDVDKYGEFAGRYVKNEYDNSPENNNNTLDIDLAVSLKKDN
                     KAFKVEKHVHSYPHCWRTDKPILYYPLDNWFIKTTALKDRMIELNKTINWKPKATGEG
                     RFGNWLENLVDWNLSRSRFWGVPLPIWVTEDRLEQIAIGSAEELKAEVEKAIVAGFML
                     TNPLADFEPGNMSKENYETFDFHKPYVDEIILVSDSGKKMVREPGLIDVWFDSGSMPY
                     AQFHYPFENKEEFERNFPADFIAEGVDQTRGWFFTLHAIAAMLFDSVAYKTVVSNGLV
                     LDKTGNKMSKKLGNAADPFSTIDEYGPDATRWYMITNSQPWDNLRFDLSGIDEVRRKF
                     LGTLYNTYSFFALYANIDGFTNSEKEIPVVERAELDRWILSELNTLIKNVDTAFTNYE
                     PTKAGRAIQYFVNEHLSNWYVRLSRRRFWKGTYAKDKIEAYQTLYKVLEVVAQLSSPI
                     APFFSDRLFMDLNSVSGNYKVESVHLTDFPVANDQLIDKDLEERMELAQKISSMVLSL
                     RKKNFLRVRQPLAKIMIPVFSNHTLKQIKSVEDLIISEVNVKAIEYITDASGVLVKRI
                     KPNYKTLGPKFGKLMKQLAGAINNIDQEGIKKLEDEGNYSIKINDDIFEISLEDVEIS
                     TEDIPGWSVATDGLITVALDITVSPQLKEEGLAREFVNRVQNLRKEKGLEVTDRITLQ
                     IEKNSKSDDAIINFNDYICSETLTDLSLVEKLEQKEAEEIELLEGISIRLIINKQ"
     gene            complement(5355..5873)
                     /locus_tag="QF480_01145"
     CDS             complement(5355..5873)
                     /locus_tag="QF480_01145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05196.1"
                     /translation="MVKKEIDLLNNQIKKLDAPDFDFESWKKYSVIILARIFGSGDEK
                     IKQLKNIDFEFTSWSLRDASGNESYEEGSKKLATEVLKAAIDELNIYGIPKTYNVNTE
                     VATSELLNIILDEFKGSQVKELTRILSSKDSKSEKKRRVKELVEEIGEFGSYDIITNI
                     LTNPVIEGLVKN"
     gene            6102..>6774
                     /locus_tag="QF480_01150"
     CDS             6102..>6774
                     /locus_tag="QF480_01150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005777517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HJN05197.1"
                     /translation="MEKNNVGHIAQIIGPVIDVVFEKEENLPKIFDALEIHRDNGEKL
                     ILEAQQAIGENTIRTIAMDSSDGLHRGMEVISLGEPISMPTGDKIKGRLFNVIGDAID
                     GMDNVDSKKRYPIHRDPPKFEELTTTKEVLYTGIKVIDLIEPYSKGGKIGLFGGAGVG
                     KTVIIMELINNIAKSYAGLSVFGGVGERTREGNDLLREMIESGVIKYGKEFTESMEKG
                     GWDLSK"
BASE COUNT         2076 a         1304 c         1122 g         2272 t
ORIGIN      
        1 cagtatattt tcgtctgcat tgctgtaaac attctccacg attagctgat gagttaagat
       61 tgtcaagact taaataacat ttaccggata cagccataca aagagctccg tgtgcaaaca
      121 cttcaatctg cactagttca cccgatggtc ctgttatgtt ttgctcacta atagctgttg
      181 taattgcttt tacttgttta atttcaagtt ctcgagctgt gaccatcaca tcggcaaatt
      241 gcgaataata cttaaccgcc tcaatatttg taatattggt ttgtgttgac atatggattt
      301 ccatgccaac tgaatgcgca tattggatta cggattgatc ggaagctatt attgccgtta
      361 tatcattttg gttggctgca tcaacaacct cttgcattgt gtcaatctca ctatcgtaaa
      421 taactgcatt caatgtaata taggttcgaa cattgttttc tttacaaata cttgaaattt
      481 taattagatc atcaagagtg aaatttttag aagatttgga acgcatatta agattgccta
      541 tgccaaaata aactgaattg gctcctcctt gaattgcagc cattagcgat tcgtaggaac
      601 cgactggtgc cattatttca atgtcgtttg cggtcattgt aacagattag agtagctaaa
      661 atagcaaata tgaaaatagg attacgaaat tctacaagct caaattcttt ctttcgaaga
      721 taagcaacca ggctacacct atggttattg ctgaatcggc aaggttaaat ataggacgga
      781 agaaaataaa gtgaccatca taaccaaaga tccatgaagg aagccacgat gggctatctg
      841 cctgagtgaa atcgataatt ggaaaatata gcatatcaac cacacggcca tgcagaaaag
      901 acgcataccc ctgtccatct gcagcgaaag tgccaagtgt atgatatgta ctttgagtaa
      961 atatcatacc ataaaaagca ctgtcgataa tattcccaaa agcacctgcg aatatcaatg
     1021 atatgctgat gaccaagcca ttacttctct ttcttttaat aattaggatc aaataaatag
     1081 cgatggcaat tattgcgagt atcctgaaga tgctaaggaa aagcttcccg aactcacctc
     1141 caaactgcaa gccaaatgcc attccgttat tttcagtaaa atataggttg aaccattgcc
     1201 caattattgg aatctcttca ccaagagtca tgctgagttt aacccaaaac ttcaacgatt
     1261 gatctgcaat cagaacaaac agtattacaa taagggattt tttcaattca gtttaattaa
     1321 ttggattggg ttttgccatc tgattcttag catcaatgct taaggttgca tgaggcacag
     1381 ccttcagtct ttctttgctt attagctttc ctgtaacacg acagatacca tatgttttat
     1441 tttcaatgcg tataagtgca ttttcgaggt tagtaataaa acgttgttga cgggcagcta
     1501 gtctgctgtt ttcttctttt gaaagaacct gttgtccttc ttcaagcacc ttaaatgtcg
     1561 gggaagtgtc gtttgttccg tgttcgctat tattactata tgcttctgtt agcaattcaa
     1621 aatcctgatt tgcttttttc agtttagcaa agattatttg cttaaattct tcaagttctg
     1681 aatctaagta ttttgtcttt ttactgtctc cattattatt ctctttcata gccttctgtt
     1741 taaatatcat taataaatga ggtattttga ccgtataaat ataggtatta tttttaaaca
     1801 cttacaatca gaaactcaat tatggtaatg ttattgttta ttaattatta accttataga
     1861 aattccttcc agtaattcaa tttcttcggc ttccttttgt tcaagctttt caactaagct
     1921 taaatcagta agggtttccg agcaaatata atcattaaaa tttattatag catcgtctga
     1981 tttgctattc ttttcaattt gaagagttat tctgtctgtg acttccaaac ccttttcttt
     2041 tctgagattt tgaacacgat ttacaaattc ccttgccaaa ccttcttcct ttagctgagg
     2101 cgaaacggta atatcaagag caacggttat caaaccgtcg gttgcaacgc tccaaccagg
     2161 tatatcttca gtgctgatct ctacatcttc aaggcttatc tcaaaaatat catcattaat
     2221 ttttatagag taattacctt catcttccaa ttttttaatg ccttcctgat caatgttgtt
     2281 aatagcacca gcaagttgtt tcataagctt accgaattta ggcccaaggg tcttgtaatt
     2341 tggcttgatt ctttttacaa gtacgcccga tgcatctgtg atatactcaa ttgctttaac
     2401 attaacttct gaaataatga ggtcttcaac agatttaatc tgttttaaag tatgattaga
     2461 aaatacgggg atcataattt ttgccaaagg ttgtcgtaca cgtaggaagt ttttctttcg
     2521 caaagacaac accattgatg aaattttttg ggcaagttcc attcgttcct caagatcctt
     2581 atcaattaac tgatcattgg caacaggaaa gtcagtaaga tgcaccgatt ctactttata
     2641 atttccactt acactattca aatccataaa taaccgatca ctaaaaaaag gagcaattgg
     2701 tgagcttaac tgagcaacaa cctcaagtac cttgtatagt gtttgataag cttctatttt
     2761 atcttttgca taggttcctt tccagaatct tctacgtgat aatcgaacat accagttact
     2821 aagatgctcg tttacaaaat actgaattgc tctgccagcc tttgttggct cataatttgt
     2881 aaaagccgta tcaacatttt taataagagt gttgagctca gatagaatcc atctgtccag
     2941 ctcagctctt tcaactacag gaatttcctt ttcactgttt gtaaatccgt cgatatttgc
     3001 ataaagtgca aaaaatgaat atgtattata aagtgttcca aggaattttc ttcgtacctc
     3061 atcaatacct gataaatcaa aacgtagatt atcccatggc tgtgaattgg ttatcatata
     3121 ccaccttgta gcatcaggac catactcatc aatcgtacta aatggatctg cagcattacc
     3181 caacttcttc gacattttat tgccggtttt atctagcaca agtccattgg atacaactgt
     3241 tttataagca accgaatcaa acaacattgc tgcaatcgca tgtaaagtga aaaaccatcc
     3301 tcgtgtttgg tcaacacctt cggcaataaa atcggctgga aagtttcgtt caaactcttc
     3361 tttattttca aatggataat gaaattgtgc atatggcatt gaacctgagt caaaccaaac
     3421 atcaataagc ccgggttcac gaaccatttt tttgccacta tctgaaacga gaattatttc
     3481 atcaacataa ggtttatgaa aatcaaaagt ttcatagttt tccttgctca tattgccggg
     3541 ttcgaaatca gctagtgggt tagtcaacat aaagcctgca actatagctt tttcaacttc
     3601 tgcttttagt tcttcggcag aaccaatcgc aatttgttcg agcctgtctt ctgtaaccca
     3661 tattggcaac ggcacccccc aaaatcttga tcgtgataga ttccagtcaa caagattttc
     3721 caaccagttt ccaaatctac cttcaccggt tgctttaggt ttccagttga tcgtcttgtt
     3781 taactcaatc attctgtctt taagagcagt agttttaatg aaccagttgt cgagaggata
     3841 atagagtatt ggtttatcag tccgccagca atgcgggtaa ctatgtacat gcttttctac
     3901 tttaaaagct ttattatcct ttttaagact tacagcaagg tcgatatcca gcgtattatt
     3961 attgttttcc ggtgaattat catattcatt cttcacatat cttccggcaa actctccgta
     4021 cttatcaaca tcaacaaagt catttacaaa gtcgctatca agatcatcaa tattaaaaaa
     4081 tcgacctttg aaatcaacca ttggacgacg ttcaccattt ttatcaatta gcaccaacgg
     4141 aacaatgccc attaacttgg ctactctgtc atcgtcagca ccaaaagtag gtgcaacatg
     4201 tacaatacct gttccttctt ctgtagtaac aaaatcaccg ggaattactt caaaggcatt
     4261 acccatgggc tttatccagg ggaagagttg ctcgtaacat aatccagtta gctcaaatcc
     4321 cttgaattca ccaacaactt tgaaaggaat ttttttatca ccatgattat aatcgtcaaa
     4381 acttagatcc ttattctttt cattgaaata tgaattaagc ctgtctttgg cgatgataac
     4441 agttatagga attccagtat attgattgaa agtgactact ttaatataat ctattttatc
     4501 gccaacagca agagcagtat ttgaagggag tgtccatgga gttgtagtcc aggcgaggat
     4561 aaaaagatca ccttcaacat cagcaaatat actatgagaa gcatcctgtt taataacctt
     4621 aaactgtgca acagccgtag tatcagttac atcacggtag cagccaggct gattgatttc
     4681 atgggtgctg agaccagtac cagcagcagg tgagtatggt tgaatgctat aacctttata
     4741 aagaagatct ttttcattga gcatctttaa taagtaccac actgattcaa tatacttatt
     4801 gtcgaaagtt atataaggat gatcaagatc aacccagtaa ccaatttttc tggtgagctc
     4861 atcccaaagg tctttatatt taagtacctc ttttcggcaa gcattattat aatcctcaac
     4921 acttattttc ttaccaatat cttcctttgt gattccaagg gttttttcaa cactaatttc
     4981 aacaggtaat ccatgtgtat cccatcccgc tttgcgttca acatattttc cttttagggt
     5041 ttgataccga caaaataaat ctttaattgt ccgagccatt acatgatgaa tacccggtac
     5101 gccattagca gagggtggcc cttcataaaa aacaaaaggc tcattaccct ttcggttttc
     5161 aagactttga gcaaacacat catttttctc ccaagtagct ctaacctctt cggctagctg
     5221 tggaagatta agttgtgcgt attcagtata ttttgttccc atttaggaaa taattttgcg
     5281 cagttaaaaa ttagccagca aaactaataa aaaatagggt agttaacttg gttattttgg
     5341 gttaaaagtt cagctcaatt ttttaccaat ccttcaatca ccggattagt aagaatattt
     5401 gtgattatat catagcttcc aaactcacct atctcctcta ccaattcttt tactcttctt
     5461 ttcttttctg atttactatc tttcgaagaa agtatccttg taagttcttt tacctgtgaa
     5521 cctttaaatt catctaatat gatgttaagc agctcacttg tagctacttc agtattcaca
     5581 ttataagttt tgggtattcc ataaatattg agttcatcaa tagccgcttt taatacttct
     5641 gttgccagtt ttttcgatcc ttcctcatat gattcattac ctgaggcgtc tcgcaacgac
     5701 caggaagtaa attcaaaatc aatattttta agctgcttta ttttctcatc tccacttcca
     5761 aaaatgcgcg ctaatatgat aactgaatat ttcttccatg attcaaagtc aaaatcagga
     5821 gcgtctaact tttttatttg attgttaaga aggtcaatct ctttctttac cattgcaata
     5881 atcgtttttg taaaagtaca aaatatattt gggcaatata acaacgcgtt actacccgat
     5941 ttgatcagta atagtctaat tataaaattg attatttatc gattatcatt gactttatta
     6001 gcttttttat ttcattaacc atttaaaatc atttcgggct attttatttg agaaattatt
     6061 atatttgccg ccacattaaa atccttaaat aatagctttt tatggagaaa aataacgttg
     6121 gccatattgc acaaattatt ggccctgtaa tcgacgtagt tttcgaaaaa gaagaaaacc
     6181 ttccgaaaat atttgatgct cttgagatac atagagataa tggtgaaaaa ttgatacttg
     6241 aagcacaaca ggctattggc gaaaatacta ttcgtacaat tgctatggat tcttctgatg
     6301 ggcttcacag aggaatggaa gtaatttctc ttggagagcc aatttcaatg cctaccggag
     6361 acaaaatcaa gggacgctta tttaacgtaa ttggagatgc cattgatggc atggataacg
     6421 ttgactcaaa aaaaaggtat cctattcata gggatcctcc aaaatttgaa gaacttacca
     6481 ctactaaaga agtattgtac acaggcatca aagttatcga ccttatagaa ccttactcaa
     6541 agggtggtaa aattggatta tttggtggcg caggtgttgg taaaactgta atcattatgg
     6601 aacttatcaa caacattgct aaatcatatg ccggactttc ggtatttggt ggtgttggtg
     6661 aacgtactcg tgaaggaaat gatttgcttc gtgaaatgat tgagtcgggc gttattaaat
     6721 acggaaaaga attcacagag agcatggaaa aaggtggttg ggatttgtca aaag
//
LOCUS       DASCQP010000070         3908 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000261184, whole genome shotgun sequence.
ACCESSION   DASCQP010000070 DASCQP010000000
VERSION     DASCQP010000070.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3908)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3908)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3908
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000261184"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(330..713)
                     /locus_tag="QF480_01155"
     CDS             complement(330..713)
                     /locus_tag="QF480_01155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05198.1"
                     /translation="MLKRLKSIIFGAVLITMSTFAMAEQETSPLPEMPSEQGQLYWLQ
                     MPVICGTSESVLAYIEKNEMTLVNVSFGREKSKPDGTPVFVIQYFIDPSYTQSIVVMS
                     TMGGEESCILYKSFDLKFMPQKQSL"
     gene            complement(777..1457)
                     /locus_tag="QF480_01160"
     CDS             complement(777..1457)
                     /locus_tag="QF480_01160"
                     /inference="COORDINATES: protein motif:HMM:NF024117.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PD-(D/E)XK nuclease family protein"
                     /protein_id="HJN05199.1"
                     /translation="MTNFIKLDDSKWPTTKGRRIDGFRFYEIDGKNYPSITTVLGVQS
                     KPGLVKWRKDVGEEAAKWEMNRAARRGKATHTLVEQYLKEETPSIRDVLPLGLFRLLK
                     PYIDQIKNIHALEKIMYSKKLTVAGQVDCIGEYNGKLSVIDFKTANKERNDAWNLNYY
                     LQTTAYAMMYEELFGTPIEQIVILMASEDGGSRAFIKEKKDYLPELEKVIQYFYKYYQ
                     ELNKDKIT"
     gene            complement(1457..2149)
                     /locus_tag="QF480_01165"
     CDS             complement(1457..2149)
                     /locus_tag="QF480_01165"
                     /inference="COORDINATES: protein motif:HMM:NF025134.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative 2OG-Fe(II) oxygenase"
                     /protein_id="HJN05200.1"
                     /translation="MITKVDTLGSLNFGPYVAYFDVHTELLEGLLSRGKKLEPGSANR
                     DLAGVLKDQRNYTMEDKEWFIKQFQPYVDEYVEGQCRFVRQQYSEPNFTKKYHLLGLW
                     INYMKEREYNPEHVHRGAITWVIYLKTPDLQYEQNGYTGASVGPGRVAFHYGEQSNPK
                     WAEHTYSYEPVEGKMWMFPAQLRHEVIPYTTKGERISVSGNFYFIHPSQETSAEVLTS
                     QKELQDEIIGKK"
     gene            complement(2262..2732)
                     /locus_tag="QF480_01170"
     CDS             complement(2262..2732)
                     /locus_tag="QF480_01170"
                     /inference="COORDINATES: protein motif:HMM:NF019896.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-Ala-D-Ala carboxypeptidase family
                     metallohydrolase"
                     /protein_id="HJN05201.1"
                     /translation="MQLSPNFSLKEMTASQTAERKGIDNNPSEDHMDNLKAVCENVLQ
                     KVRDHYGKVVSVSSGYRSPQLCVAIGSSTNSQHAKGQASDFEIYGVPNAELCKWIADN
                     CEYDQLILEYHNLDEPNSGWIHCSYRSDGENRKQILRAYKKEGGGTAYTEYNPE"
     gene            complement(2878..3267)
                     /locus_tag="QF480_01175"
     CDS             complement(2878..3267)
                     /locus_tag="QF480_01175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05202.1"
                     /translation="MAKDIPDYMRGFDTTDDWGMTPVSSTPDKTPSVDPKVVEDSKLE
                     ISKVKSDVTDIKSMMSEIMQIVNDKETLTKEISDETVKARFKDIEKIVLPFLYNLQKS
                     DEPYIHWPNRSPIIKAQIEKLLKLTRG"
     gene            complement(3267..3587)
                     /locus_tag="QF480_01180"
     CDS             complement(3267..3587)
                     /locus_tag="QF480_01180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05203.1"
                     /translation="MGTRIMPTYTFENKKTGKQYTDIMTIAEMETYLKKNKHIKQCLN
                     KINIVSGVGGMKTDSGWKDNISRIAEAHPTSPLADQHRKKSIKEIKTQQVLQKHRTRR
                     KGIK"
     gene            complement(3715..>3908)
                     /locus_tag="QF480_01185"
     CDS             complement(3715..>3908)
                     /locus_tag="QF480_01185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05204.1"
                     /translation="SGEDYESAEYLIENRGAVVEYIVKKMNYQLPKKEICCLCNREVK
                     KENLKKYNKIVEKYGLYVE"
BASE COUNT         1045 a          786 c          523 g         1554 t
ORIGIN      
        1 ttttgctgtt cattaatatc ttattcatct tactatcata tcataataag gagtaaagtc
       61 aatcgttccc ataatatacg atagtttttc tgttgccacg atatactatc aaacgccgtt
      121 acctattaac taggcagcaa gagcataact ttcgttagct tttatgtgtt tgtcctttaa
      181 agtagcgacc tactatttaa ctccagatag ttttaatcgt gaatcgatcc taattccacc
      241 ccttatattg cattgtataa atggtggagt ggtcgggaat tgcacccgag tgttctccaa
      301 ctattatcta tccttcagcg tcaaattcat tataaacttt gtttttgtgg cataaatttt
      361 aaatcaaatg acttgtataa tatacaagat tcttcaccac ccattgttga cataactaca
      421 attgattgtg tgtagctagg gtcaataaaa tattgtatta caaagaccgg ggttccatct
      481 ggtttagatt tttctctacc aaaagaaaca ttaaccaatg tcatttcatt cttttctata
      541 tatgcaagta cactttcact agttccacat ataacaggca tttgtaacca atataattgc
      601 ccttgttcac ttggcatttc aggcaatggt gatgtttcct gctccgccat agcaaatgtg
      661 ctcatagtta tgagtactgc tccaaatatt attgatttta accttttcaa cataagtgac
      721 ctctcgtgga taatttctcg ccactttgtt aatgattttg cttgatttta tctttgttaa
      781 gttattttat ctttgttaag ttcttggtag tatttataaa agtattgtat caccttctct
      841 aattcgggta aataatcttt cttttctttt ataaatgctc gtgagccgcc atcttcggat
      901 gccataagga taacaatttg ttctatggga gtcccgaata gctcttcata catcattgca
      961 taggcagttg tctgtaaata gtagttcaaa ttccatgcgt catttcgttc cttgttcgct
     1021 gtcttaaaat ctattacgga aagtttgccg ttatactcac ctatacaatc aacttgacct
     1081 gcaacagtca gtttcttact gtacataatt ttttctaaag catgtatgtt tttaatttgg
     1141 tctatataag gttttaatag tctgaacaaa cctaaaggca acacatcacg aatacttggt
     1201 gtttcctctt ttaggtattg ttcaactaat gtatgggtag ccttacctct tcgtgccgct
     1261 ctattcattt cccatttagc cgcctcttca cctacatctt tacgccactt cactaaacct
     1321 ggttttgatt gtacacctaa taccgttgtg attgatggat aatttttgcc gtctatttca
     1381 taaaaacgga aaccatctat gcgtctgcct ttagtagtag gccacttgct atcatctaac
     1441 tttataaaat ttgtcattat tttttaccta taatttcatc ttgtaattct ttttgcgaag
     1501 ttagtacctc tgctgaagtt tcttgactag ggtgtataaa gtaaaaatta ccagatacac
     1561 ttattctttc acctttggtt gtataaggaa ttacttcatg tcttaactga gcagggaaca
     1621 tccacatttt accttctaca ggttcataac tgtatgtatg ctctgcccat tttggatttg
     1681 attgttcacc ataatgaaat gccactctac ctggaccaac acttgcacct gtatatccat
     1741 tttgttcata ctgtaaatca ggtgttttta aatatataac ccaagttatt gctccacggt
     1801 gtacatgttc aggattatat tctctttctt tcatatagtt aatccataaa cctaacaaat
     1861 gatatttctt tgtaaagttt ggttctgaat attgttgcct cacaaatcta cattgacctt
     1921 caacatattc atctacatat ggttgaaact gttttataaa ccattcttta tcttccatag
     1981 tataatttct ttggtctttc aatacacctg ctaaatctct attagcagaa cctggttcta
     2041 gttttttacc tcttgataaa agaccttcta acagttctgt atgtacatca aaataagcca
     2101 catatggacc gaagttcaaa cttcctaatg tatcaacttt tgtaatcata ttcttactat
     2161 accactttct gagcgttttg tcaagtctag tttgacctat ataacattaa atggtcattt
     2221 attaaaccag ggtcgctcct caacttctcc ctatcgtgct ttcattcagg attgtactcc
     2281 gtataagcag taccaccccc ttctttttta tatgctctta atatctgttt tcggttttca
     2341 ccatctgacc tataagaaca atgtatccat ccgctattcg gttcgtctaa attgtgatat
     2401 tccaatatta attggtcata ttcgcaatta tcagcgatcc acttacacaa ctcagcatta
     2461 ggtaccccat atatttcaaa atcggatgcc tgccccttag catgctgact attggttgat
     2521 gaaccaattg ccacacataa ttgaggacta cggtatccac ttgatactga aacaactttg
     2581 ccataatggt ctctaacttt ttgcaataca ttttcacata ctgcttttaa attatccata
     2641 tggtcttcac tagggttgtt atcaataccc ttacgctcag ccgtttgact ggcggtcatt
     2701 tcttttaaac taaaatttgg acttaattgc atttaattta tcctttgcta ttaacttcat
     2761 tttttttaga tttcttaaat cagcccaact ctttggacct cttcgtatct gtctttgtat
     2821 ctcaacttca tttacttgct ttttaagttc tttatgtttc gctttaagcg acataaatca
     2881 cccccttgta agttttaata atttttcaat ctgtgctttt atgataggcg acctattcgg
     2941 ccaatgtata taaggttcat cacttttttg taaattatat aaaaacggca atacaatctt
     3001 ttcaatatct ttaaatcttg cttttaccgt ttcatcacta atctctttag tcaatgtttc
     3061 tttatcattt acaatttgca taatttcgct catcatactt ttgatatcgg taacatctga
     3121 cttaactttg gatatttcta atttactatc ttcaactact ttaggatcaa cactaggtgt
     3181 tttatccgga gtagatgata caggtgtcat accccaatca tccgttgtat caaaaccacg
     3241 catgtaatct ggtatatctt ttgccattac tttatccctt ttcttctagt tctatgtttt
     3301 tgcaagactt gttgtgtctt tatttctttt atagattttt ttctatgttg gtctgctaat
     3361 ggactagttg ggtgtgcttc tgcaattctt gatatattgt ctttccaacc actatcagtt
     3421 ttcataccac caacaccact tactatattt atcttattaa ggcattgttt aatgtgttta
     3481 ttcttcttta aatatgtttc catttctgca atggtcataa tatctgtata ttgtttacct
     3541 gtttttttat tttcaaaagt atatgttggc attattcttg tacccaagga ttatatcctt
     3601 gttcttttgc tgttttgttc ttttcgtaaa agtttaactc ttttatgcca agcccacaca
     3661 cttgttccgc tggctatttt ttctatccaa tgatagatac agttatacat tattttattc
     3721 cacataaagg ccatattttt ctacaatctt attatatttt tttaaattct cttttttcac
     3781 ttctctatta cacaagcaac aaatttcttt ttttggtaat tgataattca ttttttttac
     3841 aatatactct accacagctc ctctattctc aattaaatat tctgctgatt cataatcttc
     3901 acctgatg
//
LOCUS       DASCQP010000071         2825 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000265297, whole genome shotgun sequence.
ACCESSION   DASCQP010000071 DASCQP010000000
VERSION     DASCQP010000071.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2825)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2825)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2825
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000265297"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..935)
                     /locus_tag="QF480_01190"
     CDS             complement(<1..935)
                     /locus_tag="QF480_01190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006843178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FeoB small GTPase domain-containing protein"
                     /protein_id="HJN05205.1"
                     /translation="MNLSELKSGEKAVILKVKGRGAFRKRIIEMGFVVGKQVIVVKNA
                     PLKDPIEYNIMGYEVSLRRSEAALIEVVTGEKSGVKSNNYSGVLQMEQSLNISPITSK
                     KKVINVALVGNPNCGKTTIFNFASHSREKVGNYGGITVEAKEAHFIHAGYTFNIVDLP
                     GTYSITSYTPEELFVRDHIVNELPDVVLNVIDTSNLERNLYLTTQLIDMDIKVVAALN
                     MWDEFLETGDTFDYSSLAKMIGIPMVPTVGSKGKGIEKLFDKIISAYNDNEPIIRHIH
                     INYGNIIEQSIKKLQRLIRIDDNKALTNKVSPRYLA"
     gene            complement(1132..1680)
                     /locus_tag="QF480_01195"
     CDS             complement(1132..1680)
                     /locus_tag="QF480_01195"
                     /inference="COORDINATES: protein motif:HMM:NF028012.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5063 domain-containing protein"
                     /protein_id="HJN05206.1"
                     /translation="MSDTPIDDITLSKPVIEMATIANEFCFFFETIDKKDKLTILEFI
                     QRILPLMYLKGSLLPNIAPQYPDANERFVTEEQWESIFTMLRHKFGKDDEYWIIDPQY
                     INETEPLKASLSENITDIYQDMKDFIMLMQKNNLAARENAISECSSLMANHWGYRIGN
                     IFTRIHHLIYNVEESDSKDNLE"
     gene            complement(1761..>2825)
                     /locus_tag="QF480_01200"
     CDS             complement(1761..>2825)
                     /locus_tag="QF480_01200"
                     /EC_number="5.4.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005819128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016868 - intramolecular
                     phosphotransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-sugar mutase"
                     /protein_id="HJN05207.1"
                     /translation="IMRQKDFKIVYTPIHGTGFPLVTRILSKYGFEQVYIVDEQASPD
                     GNFPTVKSPNPEEPVALELAIQKAKETNADLVMATDPDADRVGIAIRKGEEMILLNGN
                     QAASLLIYYLLTRWRETGKLTGNEYIIKTVVSTELMAKIAVKNKVSYFDTLTGFKFIA
                     DVIRKNEGNSTFIGGGEESYGYLVGDFVRDKDAVISCAMIAEIAAWAADKGMSLYDLL
                     LDIYIEFGLHKEKLISVVRKGKSGAEEIQTMMKEFRTNPPLSLNKSKVVLIKDYLSGI
                     SRNIETGLEESIGLPSSNVLQFFTADGGKVSVRPSGTEPKIKFYFGVVAPLANKSDYS
                     RVNSELDKTIANYVTELGLD"
BASE COUNT          875 a          562 c          413 g          975 t
ORIGIN      
        1 gccagatatc gtggtgatac tttatttgtt aatgctttgt tgtcatcgat cctaattaaa
       61 cgctgtagtt tctttatcga ttgttcaata atattaccgt aattgatgtg tatatgccta
      121 attatcggtt cattatcatt ataagcagag attatcttat caaacaattt ctcaataccc
      181 tttccttttg aaccaacagt tggtaccata ggaatcccaa tcatttttgc cagactggaa
      241 taatcaaaag tatcacctgt ttcaaggaac tcgtcccaca tattcaatgc agccacaacc
      301 ttgatatcca tatcaataag ctgtgtggtg agatataggt ttctctccaa attggaagta
      361 tcaattacat ttagaacaac atcgggtaac tcattcacaa tatggtcgcg aacaaacagc
      421 tcctcaggtg tgtaacttgt aatagaatag gttccgggta aatcaacgat attaaaagta
      481 taaccagcat gtataaagtg cgcttctttt gcttcaacag ttatgcctcc gtaattacca
      541 actttttctc tggaatgtga agcaaagtta aagatagttg ttttgccaca gtttggattt
      601 cctacaagcg caacgttaat gacctttttc tttgatgtta tcggagaaat atttagtgac
      661 tgttccatct gcagtacacc actataatta ttacttttta caccgctttt ttctccagta
      721 acaacttcaa ttaaggcagc ttcgcttcta cgtaacgaaa cttcataacc catgatatta
      781 tattcaatcg gatcttttag aggggcattc tttactacaa ttacctgttt accaacaaca
      841 aatcccattt caattattct ctttcggaat gctcctctac ccttaacctt caaaatgaca
      901 gctttttcac cgctttttag ttccgaaagg ttcataactt taatagtgcc aatttattga
      961 tgaataatat ttcgatggta atatttgtac tacaaagtaa tggattgaca tccaatattc
     1021 gtatacctat tattaggtat tttagcgcta aataagaggg ataaaggctt gagatcttag
     1081 ggtttattga cgatgtctaa taaattatta acacattaat ttaccttcaa atcattctaa
     1141 attatccttg ctatcagatt cttcaacatt atatatcaga tgatgaattc gagtgaagat
     1201 attgccaata cgataacccc aatgatttgc catcagtgaa ctacattcac taatcgcatt
     1261 ttctcgagca gcaagattgt ttttttgcat caacattata aaatccttca tatcctgata
     1321 aatatctgta atgttctctg aaagactagc ttttaaaggc tctgtttcat tgatgtactg
     1381 aggatcaata atccaatatt catcatcttt accaaacttg tgtcttaaca ttgtaaaaat
     1441 actttcccat tgttcttcag ttacaaatcg ctcgtttgca tcaggatact gtggtgctat
     1501 attcggtaac aacgatccct taagatacat taatggtagt atgcgctgta taaattctag
     1561 aatagtcagt ttatcttttt tatcaatcgt ttcgaaaaag aaacagaatt cattcgcaat
     1621 agttgccatt tcaataacgg gttttgataa agtaatatca tcgataggtg tatcgctcat
     1681 tgtgaatttt tttcgtaaga cagcaacaaa aaggtgtata ataatctctt tacaaccagg
     1741 taaaatacat acatctggtc ttaatctaat ccaagttcag ttacgtaatt tgctattgtt
     1801 ttatctaact cagaatttac ccttgaataa tcagatttat ttgctaaggg tgctactact
     1861 ccaaaataaa acttaatctt aggttcagtt cctgaaggcc ttacacttac cttgccacca
     1921 tctgctgtaa aaaattgcaa tacatttgaa gatggcaagc caattgattc ttccaaaccg
     1981 gtttcaatgt ttctggaaat gccgctcagg taatctttta ttaaaaccac ttttgactta
     2041 tttaggctta acggtggatt ggttctaaac tccttcatca ttgtctgaat ttcttcagca
     2101 cctgactttc cttttcttac aacagaaatc agtttttctt tatgaagacc aaattcaata
     2161 taaatatcca ataacagatc gtaaagactc atccctttgt cagcagccca tgctgctatt
     2221 tcagctatca tagcacaaga aataactgca tctttatctc ttacaaaatc acctaccaaa
     2281 tatccatagc tttcttcacc acctccaata aatgtactat ttccttcatt ttttctgatc
     2341 acgtcagcaa taaacttaaa tccggtaaga gtatcgaaat aactaacttt atttttaacg
     2401 gcaattttag ccattagctc agtggataca acagttttga taatatattc attacctgtt
     2461 agtttaccag tctcacgcca tctagtgaga agataataaa ttaacaatga agcagcctgg
     2521 ttaccgttta gaagtatcat ctcctcccct tttcggattg caataccaac acgatcagca
     2581 tcaggatcag tcgccattac aagatcggcg tttgtttcct ttgccttttg aatagcaagt
     2641 tcaagagcaa caggttcttc cggattcgga gatttaactg ttggaaagtt accatcagga
     2701 gaagcttgtt catctacaat atacacttgt tcaaaaccat atttacttaa tatcctagtc
     2761 acaagcggaa accctgtccc atgaataggt gtataaacta ttttaaaatc tttttgtctc
     2821 ataat
//
LOCUS       DASCQP010000072         3090 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000266766, whole genome shotgun sequence.
ACCESSION   DASCQP010000072 DASCQP010000000
VERSION     DASCQP010000072.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3090)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3090)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3090
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000266766"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..376
                     /locus_tag="QF480_01205"
     CDS             <1..376
                     /locus_tag="QF480_01205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018338003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HJN05208.1"
                     /translation="NEKIAKMFEKYFTSIAPKSVKVKVDSLHGGQAYVCPIDLPAYKA
                     AELAFEKVYGKTPVPMRSGGSIPIISTFEDKLGIKSVLMGFGLESDAIHSPNENYPVI
                     NFYNGIETLTWFYQYFAEEMKK"
     gene            complement(481..2070)
                     /locus_tag="QF480_01210"
     CDS             complement(481..2070)
                     /locus_tag="QF480_01210"
                     /inference="COORDINATES: protein motif:HMM:NF013347.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="THUMP domain-containing protein"
                     /protein_id="HJN05209.1"
                     /translation="MGAIKEYKEGLDFTAKTLAGLEEPLANELKELGADEVKIIKRGA
                     TFRGNEELLYKVNYMSRLAIRILKPIGVFNVKDDKQLYDKVRKINWMNVFNLNQTFSV
                     DANLFYSELDHSHYAALKTKDAIVDQFRESTGKRPWVSTENPDIYIDVHISHDVCTIS
                     LDSSGESLHKREYRIGADKAPINEVLAAGMINLAGWKGDCDFYDPMCGSGTIPMEAAM
                     LAMKIPAGYYRKMFAFMNWEGYNEDLWLKVKNEADKAIVEVDCNIYASDRSEKAIVLA
                     KRNLKHAGLHKDIDIRVSYFDSVVPEKGGMLIMNPPYGIRMEERGELRDLYKGIGNVL
                     KQNFTGFEAWVISPNIDTAKFIGLRPSKKIALYNGPIETRFLRFDVYEGTKRYGDKPQ
                     ERSNYAKNKDTYKKDDTRTSKDTRSEDRQRSSDLRKSSYQKSRDEGTENHNRDFERKN
                     ENYRRSNYPSSEKRKRDYGSETDESSSEERRKINQERSKNFDRHMESLRRFTNSDNKK
                     SESKKKGRKRISPKKPPEDDE"
     gene            2275..2559
                     /locus_tag="QF480_01215"
     CDS             2275..2559
                     /locus_tag="QF480_01215"
                     /inference="COORDINATES: protein motif:HMM:NF024143.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtxH domain-containing protein"
                     /protein_id="HJN05210.1"
                     /translation="MSKKKSCSGFPFLVGLAIGAIAGILFAPESGEDTRKKLGDKSKE
                     LADDLYDKFDDFKDSMTEVMEDIKQGTSETLETVKKSASDLIDEVKAKAK"
     gene            2581..>3090
                     /locus_tag="QF480_01220"
     CDS             2581..>3090
                     /locus_tag="QF480_01220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05211.1"
                     /translation="MDNDNLGTSLIETLEEFKAYIENQVTYNKLLLTKRVGEFSSYLI
                     LFILLLGFSGLVLLFLSFAFAGWFDDITDLGTGAGYLVVAGIYIVLGLIVYVFRYRLI
                     FNPTRKLFGEIFFGENESSDNSTIFASRQSLSDNIKEAHGALLKQQDILTQKFNDLGQ
                     IFTFSNIAHQ"
BASE COUNT          933 a          570 c          523 g         1064 t
ORIGIN      
        1 taatgaaaaa attgctaaga tgtttgaaaa atactttaca agcattgctc caaaatcggt
       61 aaaggtaaaa gtagattcgt tacacggagg gcaagcttat gtttgtccca tcgatcttcc
      121 agcttataaa gctgccgaac ttgcttttga aaaggtttat ggaaaaactc cagtacctat
      181 gcgtagtggt ggcagtatcc ctattatttc aacctttgaa gataagctag gtataaaatc
      241 tgttcttatg ggatttggtc tggaatcaga tgcaattcat tccccaaacg aaaactatcc
      301 ggtaattaat ttttataacg gcatcgaaac attaacttgg ttttatcaat atttcgctga
      361 ggaaatgaag aagtaaagaa gtcaggaaac ggaagttgga aatcacaagt taatactctt
      421 agtttccgac ttcgagtttc tttccgaaaa gtttacattg gacaaatgct ttctctataa
      481 tcattcatca tcctctggtg gcttttttgg agaaattctt tttctgcctt tctttttgct
      541 ctctgatttt ttattgtcgg aatttgtaaa ccttcgaagc gattccatat gtctgtcaaa
      601 attcttgctt ctttcctgat ttatttttct tctttcttca gaactcgatt catctgtttc
      661 tgatccataa tctcgtttac gtttttcgga acttggataa tttgatctcc tgtaattttc
      721 gttttttctt tcaaagtcgc gattatgatt ttctgtgccc tcgtctcttg atttttggta
      781 actgcttttt cttaaatcag aacttcgttg acgatcctct gacctagtat ccttggaagt
      841 tcttgtatcg tcttttttat aagtatcttt attcttagca taatttgatc tttcctgagg
      901 tttatcccca taccttttcg ttccctcata aacatcaaac ctcaagaaac gagtttcaat
      961 aggtccgtta tacaatgcaa ttttttttga tggccttaag ccaataaatt ttgctgtatc
     1021 aatattagga ctaataaccc aggcttcaaa cccggtgaaa ttttgtttaa gcacgtttcc
     1081 aataccttta tacaaatctc gtagctcacc ccgttcttcc attctaatcc catatggagg
     1141 attcattata agcattcctc ccttttcagg gacaacgcta tcgaaatagc taactctaat
     1201 atctatatcc ttatggagtc cggcatgttt taaattcctt tttgcaagaa ctatagcttt
     1261 ttcagaacga tctgaagcat agatattaca gtcaacttca acaattgctt tatcagcttc
     1321 gtttttaacc ttaagccaga gatcctcatt gtaaccttcc caattcataa aagcgaacat
     1381 tttgcgatag tagcctgccg gtatcttcat ggctaacatg gctgcttcca ttggaattgt
     1441 tcctgaacca cacataggat cataaaaatc gcaatcgcct ttccatcctg ccaggtttat
     1501 cataccggca gcaagtacct cgttaattgg agccttgtcg gcgcctatgc gatattcacg
     1561 tttatgtaac gattcgccgg aactatcgag cgaaatagta caaacatcat gacttatatg
     1621 tacatcaata taaatatcag gattctccgt agaaacccaa ggcctcttcc ctgtactttc
     1681 tcgaaattgg tcaacaatgg catctttggt ttttaatgct gcataatgtg aatggtccaa
     1741 ctctgaataa aacaaattgg cgtctacgga aaatgtttgg ttaaggttaa aaacattcat
     1801 ccaatttatc tttcgtactt tatcatacaa ttgtttgtcg tccttaacat taaaaacacc
     1861 aataggtttt aatattctaa tcgccaaacg cgacatataa ttaactttgt aaagtaattc
     1921 ttcgttacca cgaaaagtcg cacctcgttt tattatttta acctcatcag cacccagttc
     1981 tttaagctca tttgctagtg gttcttcaag tccggcaagg gttttggctg taaaatctag
     2041 tccttcttta tattctttga tagctcccat ttgatgggca aaattaatta atttaaacag
     2101 agtttaaggt agtagccaaa tttaacaaat aactgacgca attagtaaca aaatttatcg
     2161 tttgaattgc gtaactttgc tactgaaact agaaaataat tagtttagtg aatgtaactt
     2221 tttttaataa ttacactata atacaatacg tattacctta aacaagataa tgatatgagc
     2281 aaaaaaaaat catgtagtgg tttcccattt ttagtagggc ttgcaatagg agcaatagca
     2341 ggaatattat tcgcgcctga atcgggggag gacacaagga aaaaactagg tgataaatcg
     2401 aaagaattag ccgacgattt atacgacaaa tttgacgact ttaaggattc catgactgag
     2461 gttatggaag acattaaaca aggaacatct gaaacacttg aaactgttaa aaaaagtgca
     2521 agtgatttaa ttgatgaagt aaaagcaaaa gcaaaataag tgtaactaac ttattatttt
     2581 atggacaatg ataatctggg cacttcattg attgaaacac tggaggagtt taaagcctat
     2641 atagagaacc aggttacata taataaactt ctgttaacga agagggtagg agaattttcg
     2701 tcatatctaa ttctgtttat attgttgctg ggttttagcg gacttgtatt actttttttg
     2761 tcatttgcct ttgctggatg gtttgatgac ataacagatc tgggtaccgg ggcaggatat
     2821 ttggttgtag cagggattta tatagtgtta ggtctgattg tttacgtatt ccgttaccgt
     2881 ctaatattta atccaacacg taaattattc ggcgagatat tctttggaga aaatgaatct
     2941 tctgataatt ctaccatttt tgcatcaaga caatctcttt ctgacaatat taaggaggca
     3001 cacggcgcac ttttaaaaca acaggatata ctaacccaaa aatttaatga cttaggtcag
     3061 atatttactt tttcaaatat tgctcatcag
//
LOCUS       DASCQP010000073         3057 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000271425, whole genome shotgun sequence.
ACCESSION   DASCQP010000073 DASCQP010000000
VERSION     DASCQP010000073.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3057)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3057)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3057
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000271425"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..905)
                     /locus_tag="QF480_01225"
     CDS             complement(<1..905)
                     /locus_tag="QF480_01225"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005641366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HJN05212.1"
                     /translation="MGAFKISGGNSLSGEIVPQGAKNEALQIICATLLTEKEVVISNI
                     PDISDVNKLIKLMQGLGVIVNTIGDSQYSFKASNIDLNYLETEDFYKKATSIRGSVMI
                     LGPLLARFGMGYLPQPGGDKIGRRRLDTHFIGLQKLGVEFNYDTNKKSYHVVANNLKG
                     SYMLLEEASVTGTANILMAAVMATGTTTIFNAACEPYIVQLCKMLNSMGSKISGIGSN
                     LLTIEGVDILNGTTHTLLADMIEVGSFIGLAAMTQSKLRIKNVKLLDLGLIPEIFKHL
                     GIVVSKEGKEIIGPKYEKYSNEIFI"
     gene            complement(1067..1726)
                     /locus_tag="QF480_01230"
     CDS             complement(1067..1726)
                     /locus_tag="QF480_01230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007571263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4290 domain-containing protein"
                     /protein_id="HJN05213.1"
                     /translation="MEYNTARGHLIIPEYGRNIQKMVDYAITIEDREKRTKTAKSIIV
                     SMGQMNPSIKDTIDFNHVLWDHLYIISDFKLDVDGPFPQPSREELNHKPARLKYSNKN
                     FTLRHYGKHIVNIIKKAMEYEEGDEKQALILAIANQMKKSYLRWNRESVNDQTIGKHL
                     NELSGGKLILSEDVQLVAISEVIQRTKNKKRKSHHKSYQKGSKDNSGKRRKNNYGSKH
                     N"
     gene            complement(1885..2283)
                     /locus_tag="QF480_01235"
     CDS             complement(1885..2283)
                     /locus_tag="QF480_01235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05214.1"
                     /translation="MNKKNYYKIVLAFILVSIVGFYGFKQSGEQKNTSWLQITAVESV
                     VPAGIGRSRMISIDENGKMEEIKMKNFFSIAGINFSNIRANDLKITTKIQELTNEGWV
                     LDDVTSGVFSGNENNSNGIFITRYLFKKEN"
     gene            complement(2352..2798)
                     /locus_tag="QF480_01240"
     CDS             complement(2352..2798)
                     /locus_tag="QF480_01240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05215.1"
                     /translation="MLKLKLMIIAMFFLISFQINGQNNINQITLSSFMIEVNGKDIKT
                     DTTIVQRLIPDVPTDILLYENDYIKYYVVFTYRFKGRRAKLVRRTYAEMRDGKRNYSK
                     QQKEMQELKVSVPGLFKGKSSESILYDRKSMSSIFVSFNYKFVYKQ"
BASE COUNT          943 a          542 c          417 g         1155 t
ORIGIN      
        1 tatataaata tttcattaga atatttttca tatttgggac cgataatttc tttcccttcc
       61 ttagatacga ctatgcctaa gtgtttgaaa atctcaggga ttaatcctaa atctaataat
      121 tttacattct taattctcaa tttagattga gtcattgccg caagcccaat aaaactacca
      181 acttcaatca tgtcggcaag cagtgtatgt gttgttccgt tgagaatatc aacaccttca
      241 atagtaagta aattcgaccc gatgcctgaa attttggatc ccatactatt gagcatttta
      301 catagctgaa caatatatgg ttcacacgca gcattaaaaa tagttgtagt acctgtagcc
      361 ataactgctg ccatcaaaat atttgcagtt cctgttactg aagcttcctc caacagcata
      421 taacttcctt tcaggttatt agcaacaaca tggtaacttt ttttattagt atcatagtta
      481 aattcaacac caagtttttg taatcctata aaatgtgtat cgagtcttct tcgtccaatt
      541 ttatctccac ctggttgagg aaggtagccc attccaaatc ttgctaacaa tggtcccaat
      601 atcattacac ttccacgtat gctagttgcc ttcttataaa aatcctctgt ttcgagataa
      661 ttaaggtcga tattagaggc cttgaaggaa tattggctat caccgatagt attaacaata
      721 acccctaggc cttgcattaa cttaataagc ttgttaacat cacttatgtc aggaatatta
      781 cttattacaa cttctttttc cgttagtagg gtggcacaga ttatttgaag cgcttcattt
      841 ttagcccctt ggggtactat ttcgccacta agggaattcc ctcctgatat tttaaaagct
      901 cccatttgta aatatttacg tatagtaaat aaacgaaaaa acaaccaaat tatggttgtt
      961 ctttcaaaat atttttcaag aaatagttta cttaattaga taattcaaat agacaattaa
     1021 caagtttgtt ctcatacata cctataatta tcgattaatt atgaggctaa ttatgtttgg
     1081 atccataatt attttttctc cgtttcccag aattatcttt actgcccttc tgataagatt
     1141 tatgatggga ttttctcttc ttattttttg tcctttgtat tacttcacta attgctacta
     1201 attgaacgtc ttcagaaagt attaatttac cgccagataa ttcattaagg tgcttgccta
     1261 ttgtttgatc atttactgat tctctgttcc atctcagata cgactttttc atttggttcg
     1321 ctatagccag gattagagct tgcttttcat ctccttcctc gtattccata gctttcttaa
     1381 taatattgac aatatgtttg ccgtagtgcc taagagtaaa attcttattg ctatatttta
     1441 gtctggctgg cttatgattt agttcttctc gagaaggttg tggaaatgga ccatcaacat
     1501 cgagtttgaa atcagatata atatataggt gatcccaaag aacatgatta aaatcgattg
     1561 tgtctttaat agatggattc atctgtccca tcgatacaat tattgatttt gctgtttttg
     1621 ttcttttttc cctgtcctca attgtaatag cgtaatcaac cattttttga atattcctac
     1681 catattcagg tattatcaaa tgaccacgtg cagtattgta ttccattgtt agtattgtat
     1741 ttgagatctt gtttgatcag gatagttaaa tattctgcaa aagtagttaa atattcgatt
     1801 taattgtaca caaataaaat gaagtggaaa ttatcttgat ccaaatcaag aatatgctat
     1861 ctattcaatt aattcaaagc aatattaatt ctccttctta aacaaatatc tggtaataaa
     1921 aataccattt gaattgtttt catttcctga aaaaactcct gatgtaacat catctaacac
     1981 ccaaccttca tttgtgagtt cttgaatttt agtagttatt tttaaatcgt tcgctctaat
     2041 attgctaaaa ttgataccag caatactgaa aaagtttttc atttttatct cttccatttt
     2101 accattctcg tcgattgaga tcattctgga acgaccaatt cctgctggta caactgactc
     2161 taccgcggtt atctgtaacc aactggtatt cttttgttca ccactttgtt taaacccgta
     2221 aaatccaacg atacttacga gtataaatgc taatacgatt ttgtaataat tttttttgtt
     2281 catgtctaat tatttaaaaa ttaataattc gtttgctgag aatttatttt aatatttcac
     2341 aacttctcag attattgttt atatacaaat ttataattga agcttacaaa aatactgctc
     2401 attgatttcc tatcatacaa gatactttca gatgatttcc ctttaaataa tcctggaact
     2461 gataccttta gctcttgcat ctctttttgt tgtttactgt aattcctttt accatcacgc
     2521 atttcagcat atgttcgccg aacaagtttt gctcttcgtc ctttaaatct atacgtaaat
     2581 acaacataat actttatata atcattctca taaagtaaga tatccgtagg cacatcaggt
     2641 ataagccttt gtactatagt agtatcagtt tttatatctt ttccgttcac ctcaatcata
     2701 aacgagctta aggtaatttg atttatatta ttctggccat tgatctggaa actgatcagg
     2761 aaaaacatgg cgataatcat tagttttaat ttgagcataa catacttttt tatgaataaa
     2821 agattaacag gtcgcaaggt aaagtaaaaa atagttattc aatctatcca aattcacaat
     2881 taatatcaat tcggttgctt atatgcatca gtaatagtac aattaccatg ccattaacag
     2941 actggtaata actgttttaa tacatatttc tgtatatcat gagtaataaa tctcaataat
     3001 attattcatt aacactttat ttataattag ttgtttgcaa atttggttgt tcgagaa
//
LOCUS       DASCQP010000074         1723 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000274405, whole genome shotgun sequence.
ACCESSION   DASCQP010000074 DASCQP010000000
VERSION     DASCQP010000074.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1723)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1723)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1723
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000274405"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..817)
                     /locus_tag="QF480_01245"
     CDS             complement(<1..817)
                     /locus_tag="QF480_01245"
                     /inference="COORDINATES: protein motif:HMM:NF013088.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HJN05216.1"
                     /translation="MSKKIWFAHIAVLGANVIYSINYVVAKGIMPDFLEPRAIIFLRV
                     SSAAIIFWIVGKFFPKEKVIGKDLLKLVYISFFGIALNQVMFFEGLNLTTPINASIIM
                     VGVPIIVLVISHFIIGDRLTLNRVIGIILGFLGAAYLILQSGSISFSSNTFTGNIFIL
                     INATSYGLFLVLVKPLMSKYSPITIMKWVFLFGAIYVTPVSIDLVLDANYGIIPTNIW
                     FSIGFVILFTTVFAYLLNNYSLKTISPTINSAYIYLQPVLASIIAISFGKDSLS"
     gene            complement(961..1311)
                     /locus_tag="QF480_01250"
     CDS             complement(961..1311)
                     /locus_tag="QF480_01250"
                     /inference="COORDINATES: protein motif:HMM:NF022769.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3127 domain-containing protein"
                     /protein_id="HJN05217.1"
                     /translation="MSLQVKGKLIQKLAIESGEGRNGKWEKQQFIIETDEQFPKKICI
                     VLWGDKVSMLEKVTEGDILNVSINVESREYNSKWYTDIKAWRIDREADEGSPAPIPAE
                     PPADLGLPDDDLPF"
     gene            1473..>1723
                     /locus_tag="QF480_01255"
     CDS             1473..>1723
                     /locus_tag="QF480_01255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05218.1"
                     /translation="MDQKEFKIDIPQRFFSDVSDSPFENCNICDKYLLENDVPYVVEK
                     AVKNYEGHKFSSTIYEFAICQDCHVNMQKSMSEESLQNL"
BASE COUNT          609 a          289 c          253 g          572 t
ORIGIN      
        1 aagataaact atcttttcca aacgagatcg caattattga agctagtaca ggttgtagat
       61 aaatatatgc gctattgatt gttggactta tggtttttag cgaataatta tttaacagat
      121 aagcaaaaac tgttgtaaat agaattacaa aaccaataga aaaccaaata ttggttggga
      181 ttatcccata attagcatca agtacaaggt cgatagatac tggtgttaca taaatagctc
      241 caaataaaaa tacccatttc ataatagtta tcggactata ttttgacatc agaggtttta
      301 cgagtacaag aaatagtccg tatgaagttg cattaattaa gataaaaatg ttcccggtaa
      361 atgtattaga tgaaaatgaa atactcccgc tttgaaggat taaataagct gcacctaaaa
      421 acccaagaat aattccaata actctattta aagtcaacct gtctccaatt ataaagtgag
      481 aaattaccaa tacaattatt ggaactccca ccataataat tgatgcatta attggggttg
      541 ttaaattgag cccctcaaaa aacatgactt gatttaatgc aataccaaaa aaagatatat
      601 aaactaactt tagtaaatcc ttgcctatca ctttttcttt tggaaaaaat ttacctacta
      661 tccaaaatat aatagctgca ctagaaacac gtagaaatat tatggcccgt ggttcaagaa
      721 agtctggcat gatacctttt gccacaacat agttaatact ataaattacg tttgccccaa
      781 gtacggcaat atgtgcaaac catatttttt ttgacataat aaatcactaa acgaaaactt
      841 ccctgttagt aaaaaaatca ttagaaacct gcgagattaa catgtgaaag ttttccaaga
      901 agaatgaaga tattctaaaa tgtgtataac gcgagtgttg gtattttctt gtaacactga
      961 ctaaaacgga agatcatcat caggcaatcc aagatcagct ggaggttcag cagggatagg
     1021 agcaggactt ccctcatcgg cttcgcgatc aattctccag gcttttatat cagtatacca
     1081 ttttgaatta tattctctcg attcaacatt tattgatacg ttaagtatat caccttcagt
     1141 tactttttcc agcatcgaca ctttatcgcc ccaaagaact atgcaaatct ttttaggaaa
     1201 ttgttcatcc gtttcaataa taaattgttg tttttcccac ttaccatttc ttccttctcc
     1261 gctctcaata gctaattttt gaataagttt tccctttacc tgtagactca taattttaat
     1321 acttgttaaa aaaatcaaaa ttagtgtttt taaccaaact gatcagtatc ttttatttga
     1381 tatttattat tgaataatac tcatttactt tttattcatt gaaggtttta ttttaaataa
     1441 aactcctatt tttgtaatac agcttcaatg caatggacca aaaagagttt aaaatagata
     1501 ttcctcagcg tttcttttct gacgtaagtg attcaccatt tgagaattgt aatatttgtg
     1561 ataaatattt gctggaaaat gatgtgccat atgttgttga gaaagcagtc aaaaattatg
     1621 aagggcataa attttcatca actatttatg aatttgctat ttgtcaggat tgccatgtaa
     1681 acatgcaaaa atcgatgtca gaagagtcac ttcaaaacct tca
//
LOCUS       DASCQP010000075         6227 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000275943, whole genome shotgun sequence.
ACCESSION   DASCQP010000075 DASCQP010000000
VERSION     DASCQP010000075.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 6227)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6227)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6227
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000275943"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(63..401)
                     /locus_tag="QF480_01260"
     CDS             complement(63..401)
                     /locus_tag="QF480_01260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004305562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor"
                     /protein_id="HJN05219.1"
                     /translation="MSAKFRNTKFVYSTNPDFDQWDEQDDKVITLSAENQKLYVTLDM
                     KQRRGKKVTLVTGYVGRNEDLKELGKILKSKCGVGGSVKDNEILIQGDFKEKVKDLLV
                     NMGYSCKIKG"
     gene            complement(385..1278)
                     /locus_tag="QF480_01265"
     CDS             complement(385..1278)
                     /locus_tag="QF480_01265"
                     /inference="COORDINATES: protein motif:HMM:TIGR00147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HJN05220.1"
                     /translation="MKNILFIVNPNSAKGNEERISRAIESRIDHNIFNVSVTYTQSAD
                     HAINLSKKAVAEGIDIIVAVGGDGTVNEVASQLIKTSNTLGIVPLGSGNGLARHLGIP
                     RNIEKAIDLINKQQTSTIDTGSVNGNIFVSIAGVGFDALVAERFARGVRRGFLGYFQI
                     IANEYFNYKPQTYKLTFDNGKVITERALFVAFANSNQFGYNTTIAPNAKLRDGLLDVC
                     IVKKPQIYRIPLIASLLLLKRIDISPSATILKTKSLSVVRDHKGVVNIDGEAINFGKE
                     LEIKINPLSLKIIINPYVSKV"
     gene            complement(1327..1680)
                     /locus_tag="QF480_01270"
     CDS             complement(1327..1680)
                     /locus_tag="QF480_01270"
                     /inference="COORDINATES: protein motif:HMM:NF027718.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5011 domain-containing protein"
                     /protein_id="HJN05221.1"
                     /translation="MNRSFIYTIVLVILSLSFSSSCKKDDSGDGTVPVILVLGSNPTN
                     WALELPYVDAGAIAYDITIEGDTIDITNKITTTNNVNVSSVGDYEVKYNVTDESGVAA
                     EEKIRVVKVVVGKKN"
     gene            1818..3590
                     /locus_tag="QF480_01275"
     CDS             1818..3590
                     /locus_tag="QF480_01275"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HJN05222.1"
                     /translation="MAEKLRYWLFAFFIILYPSLCLSQSTEPSKSNHVSKEKINKLPF
                     GLPVDIPLYLSGTFGELRSDHFHSGIDIKTEGVEGKIIRAIDDGWVSRIKISTGGYGK
                     TLYITHPNGYVSVYAHLQNFNDSIQKFVVNEQYLKESFTIQIFPENGEINVKKGDIIA
                     YSGNTGSSDGPHLHFEIREELSQYPVNPLLFESIKIKDYYRPKIIKLAIYPVDDNSFI
                     NGLNDTVFYDVEGWGIDHRIKGNPFITLAGRISFGIGTYDLMNDAPNKNGVYSTKLYH
                     DTNLVYHLNMNKLSFNTSRYINSLIDYSFFIRTKKRIIRTEVDTNNMLNNYLTIQNNG
                     IIDFDDSLTHKMLFEVKDVYENVSKLTFNVVGSTILITDSSSHKNNSTGSFFDFAKKN
                     SIMADRINVNFPANSFYRSFYFDFTKLEKDSNSYSSTYKLHNQFVPVHKYFTISILTD
                     SVIPELRDNMYISFSPDNKEFFYINTKSDGEYLRGKSRVLGYYKILIDTTPPIIKEVN
                     FYNNKKLKGQNNLKIEIKDEETGILNYKATINDSWILMEYDPKKELLIYNFDQMLQKG
                     KNEFKLVITDMLDNESEYNCILIY"
     gene            complement(3648..4136)
                     /locus_tag="QF480_01280"
     CDS             complement(3648..4136)
                     /locus_tag="QF480_01280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05223.1"
                     /translation="MAKRKYKRRTGKKNNTLLVFLIIIIGITILSFVISYFVTQTESG
                     EENIANTEETKSNEISNSDKLTLEGTWASYNDGAMLTIKGQNFSIEQPSVESPFFVKG
                     KIVIKDSKVTFVYTTQDSECGIRPGIYEFKFKGNDEVTFKKVDDKCGNRSSQLGATWF
                     KV"
     gene            4211..5740
                     /gene="guaA"
                     /locus_tag="QF480_01285"
     CDS             4211..5740
                     /gene="guaA"
                     /locus_tag="QF480_01285"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015532441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003922 - GMP synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006177 - GMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HJN05224.1"
                     /translation="MKETILILDFGSQYTQLIARRIRELNVYCEIHPYNKIPESLLDV
                     AGVILSGSPFSVRDEEAPIPDLSKIKGKMPLLGVCYGAQLFAQSEGGEVLPSKIREYG
                     RANLCYIDRSCRLLADMTDGTQVWMSHGDTILGIPENFGLTASTENVKVAGFKIDNEQ
                     TFGIQFHPEVYHTKEGTQLLRNFLVDICHCTQSWTPDSFIESTIISLRKKIGNDKVVL
                     GLSGGVDSSVAAVLLNKAIGNNLYCIFVDNGLLRKNEFKDVLHSYRDMGLNVKGVDAT
                     EKFISALSGISEPEKKRKAIGNAFIEVFDHEAHLIENVTWLAQGTIYPDVIESISVKG
                     PSATIKSHHNVGGLPDFMKLKVVEPLNNLFKDEVRRIGRALKMPSIIIERHPFPGPGL
                     GIRILGEVTHNRIKILQEVDHIYIQNMRDFGLYDKVWQAAAILLPIQSVGVMGDERTY
                     ENVVALRAVESTDGMTADWSPLPYDYLSKVSSEIINKVSGVNRVVYDISSKPPATIEW
                     E"
     gene            5882..>6227
                     /locus_tag="QF480_01290"
     CDS             5882..>6227
                     /locus_tag="QF480_01290"
                     /inference="COORDINATES: protein motif:HMM:NF013630.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysM domain-containing protein"
                     /protein_id="HJN05225.1"
                     /translation="MEIKKIVLVAILSILILRVSSQSVYIPKSEIIESRNGKSYYVHT
                     VRKGQTVYSIAKVYNVTPNEIYFENPVAKKGLLINQNLFIPTVNKETELKNDVVTADF
                     DFFYHVASKNETF"
BASE COUNT         2099 a         1046 c          996 g         2086 t
ORIGIN      
        1 tgattgaaca aaacatacta ttgttacaat aattagaatt ttcttcataa aataaattta
       61 aattaacctt tgattttaca actataaccc atgtttacca gaagatcttt cactttctct
      121 ttgaaatcac cttgaatgag tatctcatta tcttttacag agcctccaac accacattta
      181 gattttaaga tttttcccag ctccttaaga tcttcattac gaccaacata cccagtaacc
      241 aatgttactt tttttcccct cctttgcttc atatctaaag taacataaag cttttgattc
      301 tcagctgata gggtaattac tttgtcatcc tgttcatccc attgatcaaa atcgggattt
      361 gttgaataaa caaattttgt gtttctaaac tttgctgaca tatggattta taatgatttt
      421 caaagatagt gggtttatct taatctccag ttctttccca aaatttattg cttcaccatc
      481 tatattcaca actcctttat gatcccgaac tacacttaaa ctttttgtct ttaatattgt
      541 tgcagagggt gaaatatcaa ttcgttttaa gagtaacaag cttgcaatta atggaatacg
      601 atagatttga ggtttcttta cgatacacac atccagtaat ccatccctta atttagcatt
      661 tggagcaatt gtggtattat aaccaaactg gtttgaatta gcaaaagcaa caaacaatgc
      721 tctttcagta atcacctttc cattatcaaa cgttaactta taagtttgtg gtttataatt
      781 aaaatattca tttgcaatta tttgaaaata ccctaaaaag ccacggcgaa ctcctctagc
      841 aaatcgctct gccacaagag cgtcaaaacc aactcctgca atactgacaa agatgtttcc
      901 attaacagat cctgtgtcga tagttgaagt ttgctgctta tttattagat ctattgcctt
      961 ctcaatattt cggggtattc ctaaatgtcg agcaagtcca tttccagatc ccaacggtac
     1021 aattcccaat gtattagaag tttttatcaa ttgtgaggca acttcgttta ctgtaccatc
     1081 tcccccaact gctacaataa tatctatccc ctctgcgaca gcttttttac ttaaattaat
     1141 tgcgtggtca gccgattgag tgtaagttac cgatacatta aaaatattat gatcaattct
     1201 actttcgatt gctcgagaaa ttcgttcctc gtttcccttt gcagaattgg gattaactat
     1261 aaaaagaata ttcttcatat aatacagtct ttgttgaacg gttgtatcat aatgaaatgc
     1321 ggaatactaa tttttctttc ctacaaccac ttttaccact ctaatttttt cctcggctgc
     1381 aacaccactt tcatcagtaa cattatattt aacttcataa tcaccgacag atgaaacatt
     1441 aacattatta gtagtagtta ttttgtttgt tatatctata gtatcacctt caattgtaat
     1501 atcgtaagca atagctccgg catcaacata aggtaattcg agtgcccagt ttgttggatt
     1561 tgaacctaat actaatataa caggtacggt accatcgccg gaatcatctt ttttacatga
     1621 tgatgaaaac gaaagagata aaattacaag aactattgtg taaatgaaac tacgattcat
     1681 gatatgtaga tttaagttat tatttattcc gcaaaattat acaatttagt ctgtttatta
     1741 tcaatttcac ttgaatataa actggtaaaa cactaggtaa ataaaaacaa actatttttg
     1801 cacccaacga tttaaatatg gctgaaaaac ttagatactg gctatttgcc ttttttatta
     1861 tactttatcc gagcttgtgt ttatcacaat caactgagcc ttcgaaaagt aatcatgtta
     1921 gtaaagaaaa gataaataaa cttccttttg gtctacctgt tgatatacca ttatatctct
     1981 ctggcacatt tggagaattg agatcagatc acttccactc aggaatagat attaaaactg
     2041 agggagttga gggtaaaata ataagggcaa tcgatgacgg ttgggtaagt agaattaaaa
     2101 tatctacagg tggatatggt aagacgctat atataacaca cccaaatggt tatgtgtcag
     2161 tttatgcgca tctccaaaat tttaatgata gcattcaaaa atttgttgtt aatgaacaat
     2221 atttaaagga aagttttacg attcaaatat tccccgaaaa cggtgaaatt aatgttaaaa
     2281 aaggggatat aattgcttac tctgggaaca ctggcagctc ggatggtcca catttgcatt
     2341 ttgaaataag ggaagaatta tcacaatatc ctgtcaaccc tctgcttttt gaaagcataa
     2401 aaataaaaga ttattaccga cctaaaatta ttaaactggc tatatatcct gttgatgata
     2461 actcatttat taatggattg aatgataccg ttttttacga tgtagagggt tggggtattg
     2521 accatcgaat taaaggaaac ccttttatta ctcttgccgg aagaatttca tttggtattg
     2581 gcacctacga tcttatgaat gacgcaccaa ataaaaatgg tgtttacagc acaaaacttt
     2641 accatgacac aaaccttgtt tatcatctta acatgaacaa gttatcattc aacacatcac
     2701 gttacattaa cagtcttata gattattcat tttttatcag aacgaaaaaa aggattatca
     2761 gaactgaagt tgatactaat aatatgctta acaattattt gacaatacaa aataatggaa
     2821 ttattgattt cgatgattca ttaacccaca aaatgttatt tgaagttaag gatgtttatg
     2881 aaaatgtatc taaacttaca tttaatgttg ttggttctac tattcttatt accgattctt
     2941 ctagtcataa aaataatagt acaggttcgt tttttgattt tgcaaaaaaa aacagcatta
     3001 tggctgacag aattaatgtg aatttcccgg caaatagttt ttacagatct ttctattttg
     3061 atttcacaaa attggaaaaa gacagcaact catattcttc aacttacaaa cttcacaacc
     3121 agtttgtacc ggttcataaa tattttacca taagcatatt aactgattca gtaattccag
     3181 aactccgtga caatatgtac atttcttttt ctcccgacaa caaagaattt ttttacatca
     3241 atactaaatc agatggagaa tatctaagag gtaaatcaag agtattagga tattataaaa
     3301 ttttaattga taccactcct ccaataatta aagaagttaa tttctataac aataaaaaat
     3361 tgaaaggcca aaacaatctt aaaattgaaa ttaaagatga agaaacaggt attctaaatt
     3421 acaaagccac aataaatgat agttggatat taatggagta tgatcccaaa aaggaacttc
     3481 ttatttacaa ttttgatcag atgctacaaa aaggaaaaaa tgaattcaag cttgttatta
     3541 ccgacatgct tgataatgaa agtgaatata attgtatttt gatttactag ctaaaatctt
     3601 gctaacagtc atttttcaaa ccaccagtca caactaacta tacaacatta aaccttaaac
     3661 caggtagcgc caagttgtga actcctattc ccacatttat catcaacctt cttgaatgtc
     3721 acctcatcat tacccttaaa tttaaactca taaatcccag gtctaattcc acattctgag
     3781 tcttgagttg tgtaaacaaa agtgacttta ctatccttga ttactatttt accctttacg
     3841 aaaaatggac tttcaaccga aggttgctct attgagaaat tttgtccttt aattgtgagc
     3901 atcgccccat cgttataact tgcccatgtt ccttccaaag taagtttatc ggagttactt
     3961 atttcattag atttagtttc ttctgtattt gcgatatttt cttcaccgga ttccgtttga
     4021 gttacaaaat agctgataac aaaggataaa atcgtaatac caattataat aattaaaaaa
     4081 actagtagcg tattattctt tttgccggtt cgccttttgt attttctttt tgccatgagt
     4141 cgtttggata tggtttaaat taaaattgta ttcaaagata ctaattataa atcttagtta
     4201 cctttgcaaa atgaaagaaa ccatcctgat tttagacttt ggctctcaat atacacagct
     4261 tatagcacga agaattagag agttaaacgt ttattgtgag atacatccat ataacaaaat
     4321 tcctgaatct ttattagatg ttgcaggtgt gattttatcg ggaagtccgt tttcggtacg
     4381 tgatgaggaa gccccaattc ccgatttatc taaaattaaa ggtaagatgc ctttattagg
     4441 tgtttgctat ggtgctcaat tatttgcaca atcagaagga ggtgaagtgc ttccatcaaa
     4501 aatcagggaa tacggaaggg ctaatctatg ttacatagat agatcgtgta gattactggc
     4561 tgacatgaca gatggtactc aggtttggat gtctcatgga gatactattc tggggattcc
     4621 tgaaaatttt ggtctcaccg ctagtaccga aaatgttaaa gttgcaggtt ttaaaattga
     4681 taatgaacaa accttcggaa ttcagtttca tcccgaagta tatcacacaa aagaaggaac
     4741 ccaattactc agaaactttt tggttgacat atgccattgt actcaaagct ggacaccaga
     4801 ttcgtttatt gaatcgacaa taatttctct cagaaaaaaa attggcaatg acaaagttgt
     4861 acttggatta tcaggtggtg ttgactcatc tgttgctgcg gtactactta ataaagctat
     4921 tggaaataat ctttattgca tttttgttga caacggtctg ttaaggaaga atgaatttaa
     4981 agatgttctg cattcgtata gagatatggg ccttaatgtt aagggagtag atgcaaccga
     5041 aaaatttatt agcgcattat ctgggatttc tgaacccgaa aaaaaaagaa aggcaattgg
     5101 aaatgcattt atagaagtat ttgatcatga agcacatctt atagaaaatg taacatggct
     5161 tgcacaagga acaatatatc ctgatgttat cgaatctatt tctgtaaaag gaccatccgc
     5221 cacaattaaa tcgcatcata atgttggtgg tttacctgat tttatgaaac taaaagttgt
     5281 tgaacctcta aacaaccttt ttaaagatga ggttcgacgt ataggacgtg ctttaaaaat
     5341 gccttcgata ataattgaaa ggcatccatt tccaggccct ggattaggca ttagaatatt
     5401 aggtgaagta acgcacaata ggattaaaat tctacaggag gttgatcaca tatacatcca
     5461 aaacatgaga gactttggct tgtatgataa agtttggcag gcagcagcga tactgctacc
     5521 tatacaatcg gttggcgtta tgggtgatga aagaacttat gaaaacgttg ttgctttgag
     5581 ggctgttgaa tcaacagacg gtatgactgc cgactggtca cctcttcctt atgattattt
     5641 gtcgaaagta tcaagtgaaa taattaataa agtttcagga gttaacagag tcgtttacga
     5701 cattagctct aaacctcctg ctactattga gtgggaataa tttagaattt attacagatt
     5761 aatgatcggt taggattaag cgtaaagaag acaatcggga ttataaatca taaatgtttt
     5821 cgttttgcgt tataggataa cttagttttt tatctttgag actggatacc cgaaatttat
     5881 aatggaaata aaaaaaatag ttttagttgc catactttca attttgatac ttagagtaag
     5941 ttcacagtca gtgtatattc ctaagtcgga aataattgaa tctcgaaatg gaaaatcata
     6001 ctatgtacac actgtaagaa aaggacaaac cgtttattcc attgctaagg tatacaatgt
     6061 tactcctaat gaaatatatt ttgagaatcc tgtagcaaaa aagggtttac tgattaatca
     6121 gaacttgttt attcctactg taaataaaga aactgagctt aaaaacgatg tggttacagc
     6181 agatttcgac tttttttatc acgtggcttc caagaatgaa acgtttg
//
LOCUS       DASCQP010000076         2018 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000278144, whole genome shotgun sequence.
ACCESSION   DASCQP010000076 DASCQP010000000
VERSION     DASCQP010000076.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2018)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2018)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2018
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000278144"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            40..>2018
                     /gene="pheT"
                     /locus_tag="QF480_01295"
     CDS             40..>2018
                     /gene="pheT"
                     /locus_tag="QF480_01295"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: protein motif:HMM:TIGR00472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009328 - phenylalanine-tRNA ligase
                     complex [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HJN05226.1"
                     /translation="MKISYNWLKQYINLDVEPDTLSTVLTDIGLEVEGLEKYQSIKGG
                     LEGIVIGEVITCEQHSNADKLSVTTVNIGSEGLLSIVCGAPNVAVGQKVVVAKVGTTL
                     YNGDESFKIKRAKIRGEVSEGMICAEDELGIGTSHEGIIVLPDNVEVGIKAADYFSVE
                     EDFILDIGLTPNRSDATSHIGTARDLVAGLNQFYNTRNYSLSLPRVDDFRVDNTNLNI
                     DVIVEDTVACPRYTGVSFTGIKVGESPNWLKIKLNSIGVRPINNIVDITNYILHETGQ
                     PLHAFDANKIKGNKVIVRKTEHNSFFITLDEVERKLDANDLMICNQEDSMCIAGVFGG
                     IGSGVTEDTVNIFLESAYFDSVHIRKTSKRHGLQTDASFRFERGTDPNITKYALKRAA
                     TLIKEIAGGIVSSEIKDVYPNPINPWFIDVDLASINRLIGTTIDRTIIKKILTDLEIE
                     VIKENGDQLRLLIPTFKVDVTREVDIVEEILRIYGYNNIEITGKLNSSLSAQPQPDLE
                     KIQNSVADYLTGQGVMEIINNSLTKAEYIERSNELSPSENVQLLNPLSKDLNILRQTL
                     LFGGLETISYNLNRKSLNLSLFEFGKIYKRNSNFKNDEGVKNFIEEKHLMIFATGKVS
                     KNLWNSSDVNSDFYFISGIVSSILVKLGLDQSRLS"
BASE COUNT          669 a          278 c          421 g          650 t
ORIGIN      
        1 atcattactt ttgttggtta ttggaaaaat tgcttgataa tgaagatttc gtataattgg
       61 cttaaacaat atattaacct tgacgttgaa cctgatactc tttctacagt gcttactgac
      121 ataggtttag aggttgaagg attagagaaa tatcaatcta ttaaaggtgg tttagaggga
      181 atagtaattg gtgaagtcat tacttgtgaa caacattcca atgctgataa attaagtgta
      241 actactgtta atattggcag tgaaggacta ctttcaattg tatgtggcgc acctaatgtt
      301 gctgtcgggc aaaaggttgt tgtggctaag gtaggaacta ctttgtataa tggcgatgag
      361 tcttttaaaa taaagagggc aaagattaga ggtgaagttt cggaaggaat gatttgtgca
      421 gaggacgaac ttggaattgg cacttcacat gagggtatta ttgtattacc cgataacgtt
      481 gaggttggta ttaaggcagc tgattatttc agtgtagagg aggattttat tttggatatt
      541 ggattgaccc ccaatcgtag tgatgccaca tctcatattg gaactgctcg tgatttagtt
      601 gcaggcctaa atcaattcta taatacaaga aattattcac tcagcttacc aagggtagat
      661 gactttagag tggacaacac aaatctgaat attgatgtta ttgttgaaga tactgtggct
      721 tgtccaagat atacaggggt tagttttacc ggaattaaag taggagagtc acccaattgg
      781 ttgaaaatca agctgaattc tatcggtgtc agaccaatta ataatattgt tgatataaca
      841 aactacatat tacatgaaac cggtcagccc cttcatgcat ttgatgctaa taaaataaag
      901 ggtaataagg taattgttcg taaaactgag cataattctt tttttataac attggatgag
      961 gtagaaagga aactcgatgc taatgacctt atgatctgca atcaagaaga tagtatgtgt
     1021 attgcaggcg tttttggcgg gattggctca ggtgttacag aagatacagt caatattttt
     1081 ctggaaagtg catatttcga ctcagtccat attcggaaaa cgtccaaaag acatggcctt
     1141 caaacagatg cttcttttag gttcgaaaga ggaaccgatc caaatattac taagtatgct
     1201 ttaaaaaggg ctgcaactct gattaaggaa attgcaggag gtattgtttc ttcagaaatt
     1261 aaagatgtat atcctaatcc aattaatcct tggtttattg atgttgacct ggcttctatt
     1321 aacaggttaa ttggcactac aattgacagg actataatta agaagatact cactgattta
     1381 gagatagaag ttataaagga aaacggagat caacttagat tattaattcc aacatttaag
     1441 gtagacgtta cgcgtgaagt ggatatagtt gaggaaattc ttcgtattta tgggtataac
     1501 aatattgaga ttaccggcaa actcaattct tctctaagcg cacaaccgca acctgattta
     1561 gaaaagatac aaaactctgt tgctgattat cttacaggac agggagtgat ggaaataatt
     1621 aataattcat taactaaagc cgagtatata gaaagaagta atgaattaag cccaagtgaa
     1681 aatgttcagt tgctaaatcc tctaagtaag gatttgaata ttttgcgtca aactttgttg
     1741 ttcggtggac ttgaaacaat ttcctataat cttaacagaa aatcgcttaa tcttagtttg
     1801 tttgaatttg gcaagattta taagcgaaat agtaatttca aaaatgatga aggagtaaaa
     1861 aactttattg aggaaaaaca tcttatgatt tttgcaactg gaaaagtttc gaaaaatctg
     1921 tggaattcat cggatgtaaa ttctgatttc tattttatct caggaattgt tagtagtatt
     1981 cttgtaaaac tgggtcttga tcaaagtagg ctttcttt
//
LOCUS       DASCQP010000077         2053 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000279062, whole genome shotgun sequence.
ACCESSION   DASCQP010000077 DASCQP010000000
VERSION     DASCQP010000077.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2053)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2053)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2053
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000279062"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..941
                     /gene="thrS"
                     /locus_tag="QF480_01300"
     CDS             <1..941
                     /gene="thrS"
                     /locus_tag="QF480_01300"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006744195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004829 - threonine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006435 - threonyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HJN05227.1"
                     /translation="MNCPHHCEIYNSKPHSYKELPIRYAEFGTVYRYEQSGELHGLTR
                     VRGFTQDDAHIFCTPDQIKEEFNNVIDIIERIFRALDFNDVLIQISLRDPDNHDKYIG
                     SDENWEKSEKAIIEVAEERGLNAVIEYGEAAFYGPKMDFIVRDAIGRKWQLGTIQVDY
                     NLPERFDLTYIGADNEKHRPVMIHRAPFGSMERFVAVLIEHCGGNFPLWLTPDQVIIL
                     PISEKYNDYGKKVLNSLDKHGVRGIIDTRSEKTGRKIRDAELKKIPYMIIVGEKEEND
                     GTVSVRKHGEGDLGTSSINEISNTINSEIERLMNIK"
     gene            970..1524
                     /gene="infC"
                     /locus_tag="QF480_01305"
     CDS             970..1524
                     /gene="infC"
                     /locus_tag="QF480_01305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009135891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HJN05228.1"
                     /translation="MAQFRGRRGPRRPFVKKEDPNKINEYITAPMVRLVGENVDTGIF
                     QLRDALTLAEEHGLDLVEISPSANPPVCKIMDYKKFLYEQKKKQKEIKSKSAKVVVKE
                     IRLGPNTDDHDFNFKLKHAIKFLTEGAKVKVDVFFKGRSIIYKDKGEYILLRFAQELE
                     EYGKVERMPKLEGKRMIMIVSPKK"
     gene            1557..1751
                     /gene="rpmI"
                     /locus_tag="QF480_01310"
     CDS             1557..1751
                     /gene="rpmI"
                     /locus_tag="QF480_01310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004584226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HJN05229.1"
                     /translation="MPKMKTKSSAKKRFILTGTGKIKRKHAYKSHILTKKSKKRKRNL
                     TYFTIIDKADEKNIRMLIRS"
     gene            1829..>2053
                     /gene="rplT"
                     /locus_tag="QF480_01315"
     CDS             1829..>2053
                     /gene="rplT"
                     /locus_tag="QF480_01315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005786577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HJN05230.1"
                     /translation="MPKSNNVVASKARRKKIMKETKGQFGRRKNVWTVAKNAYEKGQV
                     YAYRDRRVKKRNFRALWIQRINAAARLYDMS"
BASE COUNT          775 a          308 c          422 g          548 t
ORIGIN      
        1 ctatgaactg ccctcatcac tgtgaaatat ataattcaaa acctcactca tataaggaat
       61 tgccaatcag gtacgctgag tttggaacag tatacaggta tgagcagagt ggtgaattgc
      121 atggcctaac aagagtacga ggctttacac aggatgatgc gcatattttt tgtacacccg
      181 accagataaa agaagaattc aataatgtaa tcgacataat tgaacgaatt ttcagagctc
      241 tggatttcaa tgatgtgcta atccagattt cattaagaga tccagataat cacgataaat
      301 atatcggaag cgatgaaaac tgggaaaaat cggagaaagc tataattgag gttgctgaag
      361 agcgaggatt aaacgccgtt attgagtacg gtgaagcagc tttttatggt cctaaaatgg
      421 atttcatagt tagagatgca attggaagaa aatggcagct tggtactatt caggttgatt
      481 ataacctacc tgaacgtttc gacctgactt atattggtgc tgataacgag aaacacaggc
      541 ctgttatgat tcaccgtgcc ccatttggct cgatggaaag atttgttgcc gtgcttattg
      601 aacattgtgg tggtaatttc ccgttatggc ttactcccga ccaggtaatt atacttccta
      661 tcagcgaaaa atataacgat tacggaaaaa aagttttaaa ttcgcttgac aaacatggag
      721 ttcgtggaat tatcgataca cgcagtgaaa aaacaggacg aaagataaga gacgcagaat
      781 taaaaaagat tccctatatg attattgtag gggaaaagga agaaaatgat ggaactgtat
      841 cagtaaggaa acatggagag ggtgatttag gaacaagtag cataaatgag atctctaaca
      901 ctataaactc agaaattgag agattgatga atataaaatg attattaact aatataggag
      961 ggtaatacaa tagcacaatt tagaggtaga agagggccac gcagaccttt tgttaaaaag
     1021 gaagatccaa acaagattaa cgagtatatt acagctccga tggttaggtt ggttggtgaa
     1081 aatgttgaca ctggaatatt ccaattaaga gatgctttaa ctcttgctga agagcatggg
     1141 cttgacctag ttgaaatatc accgtcagca aaccctccgg tttgtaaaat aatggactac
     1201 aaaaagtttc tttatgagca aaaaaagaaa caaaaagaga taaaatctaa atctgccaaa
     1261 gttgttgtaa aggagataag attaggacct aatacagatg accatgattt taactttaaa
     1321 ttaaaacatg ctattaaatt tctaactgaa ggagctaaag ttaaggttga cgtatttttc
     1381 aaaggacgtt caataattta caaggacaaa ggagagtaca tcctattgag atttgcccag
     1441 gaacttgaag agtatggtaa ggttgaacga atgccaaaac ttgaaggaaa aagaatgata
     1501 atgattgttt ctccaaaaaa ataatatttc taactaataa atttaaattt taagtaatgc
     1561 caaaaatgaa aacgaaatcc agtgccaaga aaagatttat tcttacaggc actggtaaga
     1621 ttaaaagaaa gcatgcttac aaaagtcaca ttctgacgaa aaaatcgaaa aagcgtaaac
     1681 gtaatttaac ttactttaca attatcgata aagcagatga aaagaatatc agaatgttga
     1741 ttcgtagcta aacctatttg tttaacgttt gtcatagctt taagatcccg aataacggga
     1801 cgctatgatg ataaaagatt aattaaaaat gcctaaatca aataacgtcg ttgcttcaaa
     1861 agcgcgcaga aaaaagatca tgaaagagac caaaggtcag tttggtcgta gaaaaaatgt
     1921 ttggacggtt gctaaaaatg catacgaaaa aggccaggta tatgcttacc gtgacagacg
     1981 agttaaaaaa cgtaacttca gagcattatg gatacaaaga attaatgctg ctgccagact
     2041 ttacgatatg tcc
//
LOCUS       DASCQP010000078         1560 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000282713, whole genome shotgun sequence.
ACCESSION   DASCQP010000078 DASCQP010000000
VERSION     DASCQP010000078.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1560)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1560)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1560
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000282713"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(419..1078)
                     /locus_tag="QF480_01320"
     CDS             complement(419..1078)
                     /locus_tag="QF480_01320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05231.1"
                     /translation="MKIKAIITGSTGMVGEGVLHECLNHPDVESILVINRRKCRVTNS
                     KLEEIIHKDFSDFGNIEDKLSGYNAAFLCMGVSSVGMNEEKFTHLTYDLIMALARPLS
                     KLNSDMTLCYVSGIGTDSSEKGRIMWARVKGKTENDLLKLPFKQAYMIRAGIISPTKG
                     LKHTYKSYKIINPILPTIRMIFPSYISSLKEVGLAMINSVDKGYNKQILSVKDIVKLA
                     N"
     gene            1272..>1560
                     /locus_tag="QF480_01325"
     CDS             1272..>1560
                     /locus_tag="QF480_01325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05232.1"
                     /translation="MRQVLICDIILLFLIVSLGKVSGQQSDSLMILIPSGEFIMGNDI
                     QPDSLLPHLFKKVELKATINNKYFREDGTKIYLCESPTEYYRDNYKSDIKNF"
BASE COUNT          514 a          256 c          238 g          552 t
ORIGIN      
        1 tgacacttta taatcactta ttattcacgc acatagctta cattgtccgc taatgtcaac
       61 caggataata aatatgggct ttacacccat ctgatcattg taattcattt ttctaaatta
      121 catttttttt tataagtgac tcagatatga ttgcctttag cctacaataa tgaatgattt
      181 agttggtttg atacgtaaaa cttcctcaag atgtatacat actctgttac aaaatgaatc
      241 ttaatagaat tgtatctttt aataaaaata aacagtgaat gtagctcatc gtcatcgctg
      301 taaggaattt tgaaatcttc gctacaatag cttcgtgaga aactcaatcg ttacaaactc
      361 tattttatac caaacatggc cgaatatggc aacgcattga ggttaaagca tatatcaatt
      421 aattggctag tttaacaata tcttttacgc taagtatttg tttgttataa cctttgtcta
      481 cactattaat cattgctaat ccaacttcct ttagtgatga aatgtagctc ggaaatatca
      541 ttctgattgt tggtaatatt ggattaatta ttttgtaaga cttgtaagta tgctttagtc
      601 cttttgtggg acttataatt cctgcacgaa tcatataagc ttgcttgaaa ggtaatttca
      661 atagatcatt ttcggttttt ccttttactc ttgcccacat aatacgtcct ttttcagatg
      721 aatctgttcc aatcccagat acatagcaaa gcgtcatgtc agagttcaat tttgagagcg
      781 gacgagctaa ggccattatt agatcataag taagatgagt gaatttttcc tcattcatgc
      841 caacggagga aacacccatg caaagaaaag ctgcattata tccagataac ttgtcttcta
      901 tatttccaaa atctgaaaaa tccttgtgaa ttatctcttc taatttagaa tttgttactc
      961 tgcatttccg acggttaatt accaaaatag attctacatc aggatggtta aggcattcat
     1021 gaagaacacc ttctcccacc attcctgttg atcctgtgat tattgcttta atcttcatat
     1081 gattatgtgt aaaggtctgt ctataaatat gttgtgcttg ctatttgttt tacaaattaa
     1141 gaatacttac atgtattttt tgaacattat atgcaaaacg aaaaattgta tctttgaaat
     1201 tcgccacaaa ctatataata atcgtaggcg tgaaattatg ccaaatatac caaaactaaa
     1261 agttaagagg aatgagacag gttttaattt gtgatataat tttattgttt ctaatagtta
     1321 gtttaggaaa agtttccggc caacaatcag attcacttat gattttaatt ccatcgggtg
     1381 aattcattat gggaaatgat attcagccag atagtctgct gcctcacttg tttaaaaagg
     1441 tagaacttaa agcaacaatt aataataaat attttagaga ggatggaaca aaaatttatc
     1501 tctgtgaatc tccaacggag tattatagag acaactataa atcagatatc aaaaacttta
//
LOCUS       DASCQP010000079         5333 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000282746, whole genome shotgun sequence.
ACCESSION   DASCQP010000079 DASCQP010000000
VERSION     DASCQP010000079.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 5333)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5333)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5333
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000282746"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..330)
                     /locus_tag="QF480_01330"
     CDS             complement(<1..330)
                     /locus_tag="QF480_01330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05233.1"
                     /translation="MAIIKNTFICLGFLFSIMIILSFTTLPFWMYYQLGVSHKIIKSN
                     PNYIIVLGGGGIPSESGLMRTYKASNISKKYPDAEIIIALPGDITDTSSSVNLMRDEI
                     ISRGIDSS"
     gene            553..1362
                     /locus_tag="QF480_01335"
     CDS             553..1362
                     /locus_tag="QF480_01335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05234.1"
                     /translation="MNKLRFLILLLLIHGSTFAGWVINEESTDLHGNKLIQTIYIQDN
                     LIRYETPSSIAIIDLNNNFITIVFSQYKVFWTGTIDELKASSLETYKKQMEEILAVLP
                     PSERNELDSIYLEIEKQMLDTTNHVQSNNYELVETNDKLEILGYNTTKYNILTDSIVI
                     ESIWHTTEIQPYNDVNLHRMMVFMKQLNSTSSSGIITQIDEYFNLLKSGILLKSVEFL
                     PDGNRYEANVTNIREVNIVSDFFLPPRNYRKTALSDILDLMPEISEYGPDW"
     gene            complement(1393..2004)
                     /locus_tag="QF480_01340"
     CDS             complement(1393..2004)
                     /locus_tag="QF480_01340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005861219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HJN05235.1"
                     /translation="MKIICIGRNYVDHAKELDNPVPKKPIFFLKPDTALVKNNEPFYY
                     PEHSSDVQYEVEIVLKISKTGKNISEENAHTYYQEIGIGIDFTARDVQSQCKNKGLPW
                     EISKAFDQSAPIGKFIKRNTLDNQESINFSLTINGEEKQKGNSSDMIFSFENIIAYIS
                     KFITLVDGDLIFTGTPSGVGPIAINDHFEAYLEGNKLLEFVVK"
     gene            complement(2007..2807)
                     /locus_tag="QF480_01345"
     CDS             complement(2007..2807)
                     /locus_tag="QF480_01345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014225676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HJN05236.1"
                     /translation="MKLNLKKPIAFFDIEATGLNVTKDRIVEISILKLNTNSTREIRT
                     WLLNPEYPICKEASMIHGYSNDDLTDKPTFKQVAKDISRFLTSCDLAGYNALKFDIPM
                     LVEEFLRANVDFEIKKRRLVDVQNIFMKMEQRSLNAAYRFYLGKELKNAHNAEADTLA
                     TFEILEAQLDRYADVEYKDKEGNTSIPVINDIQSLNDFSSHHKNADLMGQIIFNKEGK
                     ETINFGKYKGKTVEEIFSKDPSYYSWIMKADFPQYTKNLMTKIKLNLK"
     gene            complement(2809..4107)
                     /locus_tag="QF480_01350"
     CDS             complement(2809..4107)
                     /locus_tag="QF480_01350"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006842295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoamide acetyltransferase family
                     protein"
                     /protein_id="HJN05237.1"
                     /translation="MAKFEIIMPKLGESIIEATITKWVKNVGDQLEEDDSIVEIATDK
                     VDSEIPSPVEGQLSELLFKEGDVVAVGTVIAIVDIDGDEAESEITSTKDSDKDVITKV
                     NYKNNVNSKDEKKIDKKSIKSDYSNSSRFYSPLVKSIAAAEKIDISELDNIKGSGKEG
                     RVTKKDVQEYLNSKGSSSRSDSTTVGKGPSTPISSMVGDKVVEMDRMRRLIADHMVMS
                     KQVSPHVTSFIDVDVTNIVEWRNKVKDSFQKREGEKITFTPIFLSASSQALRDYPQIN
                     VSLDGYNIVYRKEINVGMATALPNGNLIVPVVKNADQKSLLGIVKSVNDLASRARANK
                     LQPDEIQGGTFTITNFGSFDSLTGTPIINQPQVAILGIGAIRKQPAVIETNKGDFIGI
                     KHIMILSLAYDHRIVDGALAGMYLKRLKELLENFSLDTII"
     gene            4736..5191
                     /locus_tag="QF480_01355"
     CDS             4736..5191
                     /locus_tag="QF480_01355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HJN05238.1"
                     /translation="MIDRIRKLIASEQMNPSKFADEIKFQRSSLSHVLSGRNKPSLDF
                     VMKIKQRFSEVNLEWLIFGDGDMLLTKQDESVHKSDNDSTFNESDETRHLINIESKSQ
                     TEYSSKSKEPELSTQNMENFELNTSSGMVERVIIFFNNGTFKEYVKSTT"
BASE COUNT         1813 a          855 c          794 g         1871 t
ORIGIN      
        1 tgatgaatct atccctctgg aaattatttc gtccctcatc aagttaacac tgcttgatgt
       61 gtcagttata tcgccaggta aagcaattat tatctctgca tctggatact tttttgaaat
      121 attagatgct ttatatgtac gcattaaacc tgattcactg ggtattcctc ctcctcctag
      181 gacaattata tagttagggt tacttttaat aattttgtga gacacaccaa gttgataata
      241 catccaaaat ggtaaagttg taaaacttaa aatgatcata atagaaaaaa gaaatcctaa
      301 acaaatgaat gtattcttta tgattgccat tattattttc ttaaatctta aaatcatagt
      361 ataacaacta attttcttat aatttaatag tacttatttt tctacttaaa aatggaatta
      421 atttgactat ttatgtgtaa aagtaatttt ttcttcttaa tcatgaaaac acatactata
      481 ttttttactt ttgtattaca cagattatta aagatgtata aatgagtatt aagtttcgct
      541 aataagctat aaatgaataa actacgattt ttgatattgt tattgttaat tcacggaagt
      601 acattcgcag gttgggtgat aaatgaagaa agtacggatc tacatggaaa caagttaata
      661 caaacaattt atattcagga taatctaatt aggtatgaaa ctccatcttc aattgcaata
      721 attgatttaa ataataattt tattacaata gtcttttctc agtataaagt gttctggaca
      781 gggaccatag atgaacttaa agcaagtagt ttagaaactt ataaaaagca aatggaagaa
      841 atacttgccg tattaccccc aagtgaaaga aatgaattag atagtattta tctagagatt
      901 gaaaagcaaa tgctggatac aacaaaccat gtccaaagca ataactatga actcgttgaa
      961 acgaatgaca aactggagat actcggatat aacacaacta aatataatat actaacagat
     1021 agcattgtga ttgaatcaat atggcatact actgagattc agccttataa tgacgtaaat
     1081 ctacatcgta tgatggtgtt tatgaagcaa ctaaattcta cttcaagtag tggaataata
     1141 actcaaatag atgaatattt caaccttcta aaaagtggta tattattaaa gtctgttgag
     1201 tttttgcctg atggtaaccg atacgaagca aatgttacaa atattcgtga ggttaatatt
     1261 gtgtctgact tttttttacc accaagaaac tatcgtaaaa ctgcattatc ggatatactt
     1321 gatttaatgc ctgagatatc agaatatggc ccagattggt aatcacataa tactacgata
     1381 tcttccggca actcatttaa caacaaattc aagtaatttg ttgccttcta gataagcttc
     1441 aaaatgatca tttattgcaa ttggaccaac tcctgaagga gtacctgtaa aaataaggtc
     1501 accatctacc agggtaataa attttgatat gtaagcaata atattttcaa aagaaaaaat
     1561 catatcgctt gaattacctt tttgtttttc ttcaccgtta attgtaagcg aaaagtttat
     1621 actttcttga ttatcaagtg tatttctttt aataaactta ccaattggcg cagattgatc
     1681 aaacgctttt gaaatttccc aaggtaatcc tttatttttg cattgagatt gcacatctct
     1741 agctgtaaaa tcaatgccaa tgcctatttc ctgataataa gtatgtgcat tttcttcaga
     1801 aatgtttttt ccagttttac tgatcttcaa tacaatttcc acttcatatt gcacatcact
     1861 ggaatgctca ggataataaa atggttcatt gtttttaacc agagctgtgt ctggtttcaa
     1921 gaaaaagatt ggtttttttg gaacgggatt atcaagttcc tttgcatgat caacataatt
     1981 acgcccaata catattatct tcatagttat ttcaaattaa gcttaatctt agtcattaag
     2041 tttttagtgt attgaggaaa atcagctttc attatccaag aataatagga gggatccttt
     2101 gaaaatattt cttcaaccgt ttttccctta tattttccaa agttaatagt ttccttgcct
     2161 tctttattga aaattatctg tcccattaaa tcagcattct tatgatggct cgaaaagtcg
     2221 ttaagagact gaatatcatt aataaccgga atagatgtat taccttcctt atctttatat
     2281 tcaacatcag catatctatc tagctgagct tccagtattt caaacgttgc taatgtatca
     2341 gcctcagcat tgtgagcatt ttttagttct ttgcccagat agaatcgata agcggcattc
     2401 aatgatcgtt gttccatttt cataaaaata ttttgcacat caacaagtcg tctttttttt
     2461 atctcaaaat caacatttgc tcttaaaaat tcttctacca gcatagggat atcaaatttt
     2521 aaagcattgt aacctgctag atcacagctt gtaagaaatc tacttatatc tttggctacc
     2581 tgtttaaaag ttggtttatc agtcaagtca tcatttgaat agccatgaat cattgaggct
     2641 tctttacata ttggatattc agggtttaga agccaggtgc gtatctctct ggtactattg
     2701 gtatttagtt tgagaatact tatttcaaca atacgatcct ttgtaacatt aagccctgtt
     2761 gcttctatat caaaaaaagc aataggtttt ttaaggttaa gtttcatact aaataattgt
     2821 gtctaggcta aagttttcta gaagttcttt caatctctta aggtacatcc ctgcaagcgc
     2881 cccatctaca attcgatggt catatgcaag agataatatc ataatgtgct taatgccaat
     2941 aaaatcacct ttatttgttt caataaccgc tggttgtttc ctgattgcac ctattcccag
     3001 aatggcaacc tgaggttgat taattatagg tgttcctgtg aggctatcaa aagatccaaa
     3061 attagtaata gtgaatgtac ctccctgaat ttcatcaggt tgaagtttat tagccctagc
     3121 tctactggcc agatcattga cagattttac aattcccaac aaacttttct gatcggcatt
     3181 ctttacaaca ggtactatta aattaccgtt tggaagagct gtagccattc ctacattaat
     3241 ttccttgcga tatacgatat tatatccgtc aagtgaaaca ttaatttgtg gataatccct
     3301 caatgcctga gatgatgcac tgagaaatat aggagtgaat gtaatttttt cgccttctct
     3361 cttttgaaag ctatctttaa ctttatttct ccattctaca atgttcgtaa catcaacatc
     3421 tataaatgat gtaacatgag gtgaaacctg cttcgacata accatatgat cggcaattaa
     3481 tcttctcata cgatccattt caacaacttt gtcgccaacc attgatgata ttggcgtaga
     3541 aggacctttt cctacagtag tagaatcaga tcgactacta cttcctttac tattgagata
     3601 ttcttgaaca tctttttttg ttactctgcc ttctttacca ctccctttaa tattatcgag
     3661 ttcactaatg tcaatttttt cagcagcagc aatacttttt acaaggggtg agtaaaatct
     3721 tgatgaattt gaataatcac ttttaattga tttcttatca atttttttct catctttact
     3781 attgacatta ttcttgtaat taactttcgt aattacgtct ttatcagagt ctttcgttga
     3841 agtaatttct gattctgctt catcaccatc gatgtctaca attgctatta cggtacccac
     3901 agcaaccacg tctccttcct taaataaaag ttcagaaagt tgtccttcaa cgggactagg
     3961 gatctccgaa tcaaccttat ctgtggcaat ttcaacaatt gaatcgtcct cctcaagttg
     4021 atcaccaaca tttttaaccc atttggtaat tgtagcttct attatgcttt caccaagttt
     4081 gggcataata atctcaaatt ttgccattat ctatttatta taacattcca ttactaaaat
     4141 attttcatgt atggaaaata gggtagaggc tatatccatg aatctgcaaa aataatatta
     4201 ttatttgtaa tgattataaa gaacgaaaac tattaaggac aaataccaat ttgtgcgaat
     4261 aattaagagt aattgggcta aaaagaaact gtaattttat atatgatata ttaaatgtac
     4321 atatgtgaac aatacacaaa tgtaaattgt aaatattagg cttaagttat atataataga
     4381 taaacagaca gttatcagcg ttatgtaaaa tagagaaaga ttaaattatg ttactaggac
     4441 aaattataat acaggttaaa ttaataattt gcattataga ctttaataga cgtataacca
     4501 gatatataga tgttgttaac agtaagatac tttaacatat tactattatt gagtattctg
     4561 tagttattaa agtataggga atataataga ttgataaaca agtataaaga ttactatatc
     4621 tataatggac tttatatatg ttcatatttc acaaatgtaa ttttgataat tattatgttt
     4681 cagataacat atgtaaatta cagtaaacta ttgttatatt tgtaaacaaa aaattatgat
     4741 agatcgaatt cgtaaattaa tagcttcgga gcaaatgaat ccttctaaat tcgctgatga
     4801 aatcaagttt cagaggtcat cattatcaca tgtgctgtca ggacggaata aaccaagcct
     4861 tgattttgtg atgaaaatta agcaaagatt ctctgaagta aatcttgaat ggctaatatt
     4921 tggagatggt gatatgttat taactaagca agatgaatca gttcataagt cagataatga
     4981 tagcacattt aacgaaagtg acgaaactag acatctgatt aatatagaat caaaatcaca
     5041 gaccgagtat tctagtaagt caaaggaacc tgaattaagt actcagaata tggaaaattt
     5101 tgaactaaac acaagttcag gcatggttga aagggtgata attttcttta ataacggtac
     5161 ttttaaagaa tatgtgaaaa gtacaacata aatggttttt caaacaaatg ttggtgattg
     5221 caaaacgata acctaatatc tctcaaattc tgaaaagaag aaattacctt ctattacagc
     5281 attttcatca ctatcagaac catgtactgc gtttgcctca attgaagtag cat
//
LOCUS       DASCQP010000080         2159 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000287584, whole genome shotgun sequence.
ACCESSION   DASCQP010000080 DASCQP010000000
VERSION     DASCQP010000080.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2159)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2159)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2159
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000287584"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            52..1041
                     /locus_tag="QF480_01360"
     CDS             52..1041
                     /locus_tag="QF480_01360"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018339247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004073 - aspartate-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HJN05239.1"
                     /translation="MKIAVVGATGLVGKEILQVLEERNVPVTEFLPVASSNSVGKKVI
                     FSSEEYEVISIENAIAKKPDIAIFSAGGETSLKWAPSFADLGTKIIDNSSAWRMNDNV
                     PLIVPEINGVILKNDDSIIANPNCSTIQLVMALSPLHKKYNIKRLVISTYQSVSGSGV
                     LAVNQLMEERAGKEANMAYPHKIDLNIIPHAGNFDVDGYTTEETKLVNETNKILQSNI
                     KVTATVVRVPVVSGHSEAVNIEFENDFVVEEVKRLLGNMPGVVVFDFPEANLYPMPIL
                     AQGKDEVFVGRLRRDFSQPNCINLWIVSDNLRKGAATNAVQIAQYLITNNLTK"
     gene            1042..1965
                     /locus_tag="QF480_01365"
     CDS             1042..1965
                     /locus_tag="QF480_01365"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003919 - FMN adenylyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HJN05240.1"
                     /translation="MKIYNSIKDFQPVINPVVTIGTFDGVHLGHQKIFKRMKAEAKRI
                     KGETVVITFHPHPRIVLGLDSANLKFVKTEKKKIEHIAKAGIDNLIIIEFTKEFASTS
                     SKQFIKDLLVDYIHPAVLIIGYDHQFGNNRKGSIELLTSMGNQYGFIVEKVESQDIGE
                     ITISSTKIRNFLNQGDITGANKLLGHEYSITGKVVKGRSIGHNLGFPTANIEVGDEYK
                     LIAAIGVYACRVQFQGITYKGMSNIGFRPTFDKGDLTIEVNIFDFEKNIYGKEITISF
                     VARIRDEHKFRNTEALKVQLAKDKISTLKIL"
BASE COUNT          770 a          323 c          398 g          668 t
ORIGIN      
        1 tttaaaacat ttaataaatc acttttttct cataattaaa atgcttagca aatgaaaatt
       61 gcagttgttg gtgccacagg attggtaggg aaggaaattc tacaagtact ggaagaaaga
      121 aatgttccag taacagaatt cttgccagtt gcttcgtcaa attctgtggg aaaaaaggtt
      181 attttctcaa gtgaagaata tgaggtaata tccattgaga atgctattgc caaaaaacct
      241 gatattgcaa tattttcagc aggaggggaa acatcactaa aatgggcacc cagttttgca
      301 gatcttggaa ccaaaataat tgataattcg tcagcttggc gaatgaatga caatgtacct
      361 cttattgttc ctgaaataaa tggggtaata ctgaaaaatg atgattcaat tattgcaaac
      421 ccaaactgtt caacaattca gttggttatg gccttatcgc cattgcacaa aaaatacaat
      481 ataaaaaggc ttgtgatatc aacataccag tcagtttctg gaagtggtgt actagctgta
      541 aatcaattga tggaagaaag agcaggtaaa gaagccaaca tggcttatcc ccacaaaata
      601 gatcttaata taataccgca tgcaggaaat tttgatgttg atggttatac aactgaggaa
      661 acaaaacttg tcaacgaaac caataagata ctccagtcta acataaaagt aactgctact
      721 gttgttaggg tgcctgtagt atctggtcat tctgaagctg ttaatattga gtttgaaaat
      781 gatttcgtag ttgaagaagt aaaaagactt ttgggaaaca tgcccggagt tgttgtattt
      841 gattttccgg aagcaaacct gtatccaatg ccaatattag ctcagggaaa ggatgaggtt
      901 tttgttgggc gtcttcgtag agatttttca caacctaact gcattaattt atggattgtt
      961 tctgataacc tccgcaaagg tgctgcaacc aatgctgttc aaatagcaca atatttaatc
     1021 acgaacaatc tgacgaaata ggtgaaaata tataatagta taaaggattt ccaacctgtt
     1081 attaatcccg ttgttaccat tggcactttt gatggtgttc atttagggca tcagaaaatt
     1141 tttaaacgaa tgaaagctga agcaaaaagg attaagggtg aaacagtagt gataaccttt
     1201 catcctcatc caagaattgt tcttggtttg gattctgcaa atctgaaatt tgtaaaaacc
     1261 gagaaaaaga aaattgaaca cattgcaaaa gccggtattg ataaccttat tattattgaa
     1321 tttacaaaag aatttgcctc tacttcttcc aaacaattta taaaagattt acttgttgat
     1381 tatattcatc ctgcagtatt aataattggt tacgatcatc aattcggtaa caatagaaaa
     1441 ggtagtattg agcttctcac gtcaatgggt aatcaatatg gttttattgt tgaaaaagtt
     1501 gaatctcaag atattggaga gataactatt agctctacta aaatcagaaa cttccttaat
     1561 caaggtgaca tcactggagc aaataagtta ttaggtcatg agtattcaat aactggtaag
     1621 gttgttaaag gtagatcaat tggacacaat cttggttttc caacagcaaa tattgaagtt
     1681 ggagatgaat acaaattaat tgcagctatt ggtgtatatg cttgtagagt tcaattccaa
     1741 ggcatcacat ataaaggaat gagtaacatt ggttttcggc caactttcga taaaggtgat
     1801 ctaacaattg aagtaaatat ttttgacttt gaaaagaata tttatggtaa agaaattact
     1861 atatcgtttg ttgcccgaat acgtgatgaa cataagtttc gtaacactga agctctaaag
     1921 gtgcaattag caaaggataa gatcagcaca cttaaaattc tataaattaa acatttctat
     1981 tacatttgtg ccccactata atattaaaaa aaataatttt aaaataattg atatgaaaat
     2041 taaaataacc ggtctgattt tggccataac atttttgtgg acaagtagtt caattgcctg
     2101 cacaaattat ctaattacaa aaggagcatc tgtagatgga tcaacaatga tctcatatg
//
LOCUS       DASCQP010000081         6410 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000325571, whole genome shotgun sequence.
ACCESSION   DASCQP010000081 DASCQP010000000
VERSION     DASCQP010000081.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 6410)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6410)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6410
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000325571"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..331
                     /locus_tag="QF480_01370"
     CDS             <1..331
                     /locus_tag="QF480_01370"
                     /inference="COORDINATES: protein motif:HMM:NF014696.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004609 - phosphatidylserine decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HJN05241.1"
                     /translation="DVFANVLRDNKGDLGATDFTDYQFNQERGMLVMDTPVGLVACLP
                     IGMDVISSINFSVDEGDYLNKGDEFGNFLFGGSDMIMLFERDDIDIKVTEVGKLYKLG
                     QVFGVVK"
     gene            complement(944..1246)
                     /locus_tag="QF480_01375"
     CDS             complement(944..1246)
                     /locus_tag="QF480_01375"
                     /inference="COORDINATES: protein motif:HMM:NF013691.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HJN05242.1"
                     /translation="MERGGFAYITSTKMNTVLYTGSTSDLVARIDQHKSKEYPNSFTA
                     KYNVDKLVYYEYFQFIEEAILREKQIKSWKRNKKEKLIGDFNPGWKELYFELDDWD"
     gene            complement(1345..2343)
                     /locus_tag="QF480_01380"
     CDS             complement(1345..2343)
                     /locus_tag="QF480_01380"
                     /inference="COORDINATES: protein motif:HMM:NF033542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HJN05243.1"
                     /translation="MKFTSFIGIDISKLDYDVAHLDVNGTVVDTKKFSNNSSGFRSML
                     SWIKKSSATEQLLFCLEHTGVYCLGICVFFEEYGLNYSLQSGLQIKRSMGIQRGKNDK
                     ADACVIGKYAYLNRNEIDCYRLPSRIILKLKQLVSYRERLVKSNVALKIAAKELKAFT
                     DKDMHGYIVSDSQEHIKHITKSIIEIDHSLKQIVAEDPALNRMFKLITSVKGVGLHIA
                     INMIVVTHGFTRFKNWRKFSCYCGLAPFEHRSGSSIRGKTKVSHLGNKKIKAIIGNGI
                     ASAIQHDPEIASYYKRKLEEGKHKMVVMNAIKNKLISRVFAVVKRGTPFVPLYQHI"
     gene            2781..5828
                     /locus_tag="QF480_01385"
     CDS             2781..5828
                     /locus_tag="QF480_01385"
                     /inference="COORDINATES: protein motif:HMM:NF024915.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HJN05244.1"
                     /translation="MRKSFATSGIILAFLFLSINLISQQTVFNDPSNITYREAIRLFD
                     QQNYGSAISVFDKYMVEDQDKKDVFYENAAYYSTVCAVKLRTKDAVNRVQRFAADYPA
                     SVWIPAVNFELGNIYYKDKKYTMALDIYNKISPAKLDGVQRAEYYYKKGYCQMKQSQF
                     DQALTSYSKVMDTKSSYSKPANYYFAHIQYQKGNNDQALAAFKAIENDRKFRKYVPLY
                     LIKIYYQQGEYQTVIDEGIRYLVTSAKKEQGNISRLIANSYYNLGDYTKASEYFARYE
                     SSGKHNDDPDEQYRIGYSKFIAGKYKDAIHNFQAATKAGGFVEQNAWYYLGYCYLNSN
                     QPKFAQSAFLKAYKQNSNKDIASDALFSYVKITIEIGPDSYNDPVTVIEEFIDNNPNS
                     SHATTAYDLLSQLYLTSNNYSGALASIEKVGNPNKRLKGVYQQLAFAQGVAYFNRQAY
                     TDAGSYFKKSLLYPIDSKLEAEALYWQADALYRQKKFREAANIFYRFRTSKGAKLTDL
                     STIALYNSAYCAFNTKQYRNAIDLFQKFLNQKSSKINLINDAYLRLADSYLITKDYNK
                     AIRWYDKVISNRSDDADYALFQKAICYGSQGDFRNKLSTLNKLTTNYKRSQYYDDALY
                     DIASTNLIQNDQRHAIVYFDKLVKEKPKSSYAEKALVKMGFVYYSNNQYEQAVKALRK
                     VIDKYPASIEAKEALVTLQNVYMDMGQVDKYIEYANTLDFVQVSTSEEDSLKFTTGEN
                     HYMNNDCNNAITALEKYINQFPTGGFVLTANHYLSQCMEKKGDDEKAITYYEKIIEYP
                     ENQYTVKALLKVARVMYTRNEFEKALNYYDRLAQLAENKLMILEANDGVMKSAWKTGN
                     IPKVKEAARNLLKTEKVSEGQLVYAHYLLGMVAMDEKRYTEAEREFTITTNLSTGEPG
                     AEALFNKALIVYRQNRLEEAENLIYELPEKYPSFDYWIAKGFILLADIYIGRDNIFQA
                     EQTLVSVIENYKGEDLKKIAEGKLERLRASQIEVPEEEENDNQ"
     gene            5840..>6410
                     /locus_tag="QF480_01390"
     CDS             5840..>6410
                     /locus_tag="QF480_01390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05245.1"
                     /translation="MHKQNIIRFSLMLMALLLVRIVLAQTQSGTSEGHNEQVTIISSF
                     DPSINQAFKLNTSPEALIFNITKPEFTYQAFNIDQPTEITLNPIKPVVINADKRVSVT
                     KNSLKAGVGSLFSPYLDFFHSSGQKSSYRFDAHLYHLSTFRNIEHYSPSPESNTSASL
                     HYKKFFGSHIFDVGFDYSLKTNRYYGFKPD"
BASE COUNT         2103 a         1146 c         1111 g         2050 t
ORIGIN      
        1 agacgttttt gccaatgtac ttagagacaa caaaggtgat ctgggtgcaa ctgactttac
       61 tgattatcag tttaatcagg agcgaggtat gttagtcatg gatacaccag ttggcttggt
      121 tgcttgttta ccaattggaa tggatgttat ttcctctatt aatttcagtg ttgacgaggg
      181 tgactatctt aacaagggcg atgaatttgg taatttctta tttggtggct ctgatatgat
      241 aatgcttttc gagagggatg atattgacat aaaagtaacc gaagttggca aattgtataa
      301 acttggacag gtatttggcg tagttaaata aatcaaatcc tcctctttcc aatttcgtta
      361 aatttttaat tatttttaga ctctcacggt cgttcctccc tcacctgcct gccggctagg
      421 cagggagtta aacgttctgt tttttttagt tgtgtactac cccaccctac acagaatcgt
      481 ttaattctga ggcattttta ggtaagcctg tgcgtaagca tgccgtaaga atccggaact
      541 tatttatacg atggttgttg ggttttcatg tttgttcaat tgagactctc gcggtcgtac
      601 ctccctcaga gttaaacgtt ttgtttttga gttgtacact gccctacgcc acccagagtc
      661 gtttaattct gaggcatttt caggttggct tgtgcgtatg caggccgtga gaatctcaca
      721 atgaagtaag gagctcattc tactcaatta atttctatct caactttgtt gttcaattga
      781 gactctcacg gtcgttcctc cctcagagtt aaacgttttg tttttgagtt atacactgcc
      841 ctactccacc tagcttcgtt taattctgag gcattttgag gttggcttgt gtgtgggcat
      901 gccgcgagaa tctataatta gttaatgtca tctttgatca atattaatcc caatcatcaa
      961 gttcaaaata gagttctttc caccctgggt taaaatcacc tatcaatttc tcttttttat
     1021 ttcgtttcca agacttgatt tgcttttctc tcaaaattgc ttcttcgata aattgaaaat
     1081 attcataata taccagttta tctacgttat actttgctgt aaatgagttt ggatattctt
     1141 ttgatttatg ttgatctatt cttgcaacca aatcagatgt tgaaccagta tataaaactg
     1201 tattcatttt tgttgatgtg atatatgcaa accctcctct ttccattttt actaaagtac
     1261 tacttatttt tagactctca cagtcgttcc tccctcacct gcctgccgaa ttctaagata
     1321 aaaacaaata ttctatagat ttttttatat gtgctggtat aatggaacaa atggagttcc
     1381 tctttttact actgcaaaga ctctacttat aagtttattt tttattgcat tcattacaac
     1441 cattttgtgt tttccctcct cgagcttcct tttgtaataa cttgctatct ctgggtcatg
     1501 ttggattgca gaggcaatgc cattaccaat aatcgctttt atttttttat ttcccaaatg
     1561 actcactttt gttttgcctc taatagaact tcctgatcta tgttcaaatg gagcaagacc
     1621 acaataacaa gaaaattttc tccaattctt gaaccttgtg aagccatgcg ttacaactat
     1681 catattaatg gctatatgca gcccaacccc ctttacagat gtaattaact taaacatcct
     1741 gtttagggct ggatcttctg caacgatttg ttttagtgaa tgatcaattt caatgatact
     1801 tttagtgata tgctttatat gctcctggga gtcagaaaca atatatccgt gcatatcctt
     1861 atcagtgaat gctttgagtt cttttgctgc aatttttaaa gcaacattgg atttaacaag
     1921 cctttctctg tatgaaacaa gctgctttag tttcaaaatg attctagagg ggagccgata
     1981 acaatcaatt tcatttctgt ttaagtatgc atattttcct attacacatg catcggcctt
     2041 atcattcttt cccctttgga tacccatgga tctctttatt tgtaatccag attgaagact
     2101 ataatttagc ccatattctt caaaaaatac acaaataccc agacaataaa ctcctgtatg
     2161 ctctaagcag aataataatt gttctgttgc actggacttc ttgatccagc tcaacatgga
     2221 tctaaatccg gaactattat tagaaaactt ctttgtgtct acaactgtac cgttaacatc
     2281 tagatgagct acatcataat ctaattttga aatgtcaatt ccaataaatg aagtaaattt
     2341 cataccttta tcttttattt gaataactaa aacctttact aggcctaaaa gcctataatt
     2401 ctaaatggtg cttattcaaa aagaaggcag aggactaatt cggcagttag gaatgtgatc
     2461 ctagcaggca ggccagttca cctctgcttt catttttaat gaacaactaa atttaagaaa
     2521 ataaataaga tcgctaatct aaaggcaggt aggcttcact tcgtaaactc cgttcagaat
     2581 gacaacaatg ttcaagtatt cataactctc actaactcct cacaactcac caattcctga
     2641 agaattatat tatttcctgc tttttttcgt ttaatcaaca tataatttgt taataatttt
     2701 ctgcaaaccc taagtgtggt gacaattatt atagaatttt gttaactgat aaatttaccg
     2761 gccaaaacat aattattgaa atgagaaaat ccttcgcaac ttcaggtatt atacttgctt
     2821 ttttattctt atccataaac cttatttccc aacaaacagt tttcaacgat ccctcaaaca
     2881 ttacatacag ggaagcgatc aggttatttg atcaacaaaa ttatggatcg gcaatctcgg
     2941 tttttgataa gtacatggtt gaagatcagg ataagaaaga tgttttttac gaaaatgctg
     3001 cttattacag taccgtttgt gctgtaaaac tgaggacaaa agatgcggtt aaccgagttc
     3061 aaagatttgc tgccgattat ccagcaagtg tttggattcc cgccgttaac ttcgaacttg
     3121 gcaacatcta ttacaaggac aaaaaatata caatggcttt ggatatatac aacaagatat
     3181 cgccggcaaa acttgatgga gttcagagag ctgaatatta ttataaaaaa gggtattgcc
     3241 aaatgaagca aagtcaattt gatcaggcct taacttcata cagtaaggtt atggacacaa
     3301 aaagcagcta ctcaaaacct gccaactatt attttgctca tatacaatat caaaaaggaa
     3361 acaacgacca agcattggca gcctttaaag ctattgaaaa tgatagaaaa ttcaggaaat
     3421 atgtaccctt atatctaatt aagatttact accaacaagg tgaatatcaa actgttattg
     3481 atgagggaat tcgttatcta gttacgtctg caaaaaagga acaaggaaat atatcaaggc
     3541 ttattgctaa ttcatattat aatttaggag attatacaaa ggcatcagag tattttgcga
     3601 gatatgagtc aagtggtaag cataatgatg atcctgatga gcaataccgt attggctatt
     3661 caaagtttat tgccggaaaa tacaaggatg caatacacaa ttttcaagct gccacaaaag
     3721 caggtggttt tgttgaacaa aacgcatggt attatcttgg ttattgctat ctgaactcaa
     3781 accaaccgaa atttgctcag agtgcctttt taaaagcata taagcaaaac agcaataagg
     3841 atattgcttc tgacgcctta ttcagctatg ttaaaattac tatcgaaatt ggccctgata
     3901 gttataatga tcccgtaaca gtaattgaag agtttatcga taataatccc aactcatcgc
     3961 atgcaactac tgcctacgat cttctttcgc aattatattt aacatccaat aattattcag
     4021 gagcattagc atcaatagaa aaagttggaa atccgaacaa gcgtttaaag ggtgtatatc
     4081 aacaacttgc atttgcccaa ggtgtagcgt atttcaatcg tcaggcttat acagacgcag
     4141 gaagttattt caaaaaatcg ttgctctacc ctattgatag caaattagaa gctgaagcat
     4201 tgtattggca ggcggatgct ttatatcgac aaaaaaagtt tagagaagca gcaaatatat
     4261 tctatcgttt ccgcacttca aaaggagcaa aactaactga cctaagcact attgctttat
     4321 ataattcggc ctattgtgca ttcaacacaa agcaatacag aaatgccatt gatctatttc
     4381 aaaaattctt aaatcaaaaa agcagcaaga taaatttgat aaatgatgct tacttacgtt
     4441 tggcggatag ctatttgatt acaaaggatt ataacaaagc aatcagatgg tacgataaag
     4501 taataagcaa tcgttcggat gatgctgatt atgcactctt tcagaaagct atttgttatg
     4561 gatcgcaagg tgatttcagg aataagctaa gtacacttaa taagctcaca actaattaca
     4621 aaagatcgca atattacgat gatgccctgt atgatattgc ttctaccaat ctgatacaga
     4681 acgatcaacg acacgcaata gtttatttcg ataaattagt aaaggagaaa ccaaagagca
     4741 gttatgcgga aaaagctctg gtgaaaatgg gatttgtata ttacagcaac aaccaatatg
     4801 aacaagcggt taaagcgtta agaaaggtaa ttgacaagta tcctgcatcc atagaagcta
     4861 aagaagctct tgttacgctt caaaatgtgt acatggatat gggtcaggta gataagtata
     4921 tagaatatgc caacacactt gattttgtcc aggtatctac aagtgaagaa gattctttaa
     4981 aattcactac aggtgaaaat cattacatga acaatgattg taataatgct ataacagccc
     5041 ttgaaaaata tatcaatcag tttccaacag gaggatttgt gctaactgcc aatcattatc
     5101 tatcacaatg tatggaaaag aagggtgacg atgaaaaagc tattacgtat tacgaaaaaa
     5161 taattgaata tcctgagaat caatacactg tgaaggcttt acttaaagta gctagggtaa
     5221 tgtatactag aaatgaattt gaaaaggcat taaattatta tgatagacta gcgcaattag
     5281 ctgagaataa attaatgata ctcgaagcaa atgatggtgt aatgaaaagt gcctggaaaa
     5341 caggaaatat tccaaaggta aaagaagctg cccgaaatct attaaaaact gaaaaggtaa
     5401 gtgagggcca attagtttat gctcattatt tattggggat ggtagcaatg gatgagaaac
     5461 gatataccga agcggagagg gaatttacca tcacaaccaa tctatcaacg ggagagccag
     5521 gtgctgaagc tctttttaat aaagcattaa ttgtttatcg tcaaaaccgc cttgaagaag
     5581 ctgaaaatct gatctatgaa ttgccggaaa aatatccttc atttgattat tggatagcaa
     5641 aaggatttat actacttgcc gatatttata ttggacgaga caatatattt caagctgaac
     5701 aaacattagt tagtgttatc gaaaactata aaggagagga cttaaaaaag attgctgaag
     5761 gtaagcttga acgattacga gcttcccaga ttgaagtccc ggaagaagaa gagaatgata
     5821 atcaataaaa atgagaaaga tgcataaaca aaatataata cgcttttcct taatgttaat
     5881 ggcattgtta ctggtaagaa tagtactggc acaaacccaa tccggcacct ctgaaggaca
     5941 caatgaacaa gtaacaatta taagttcatt tgatccttcg attaatcagg cattcaagtt
     6001 aaatacttca cctgaagcat tgatcttcaa tattactaaa cctgaattta cctaccaggc
     6061 ttttaatatc gatcaaccta ccgagattac attaaaccca attaaaccag ttgttataaa
     6121 tgcagataag cgagtttctg ttactaaaaa ttcgcttaaa gccggagttg gtagcttgtt
     6181 tagtccatat ctcgactttt ttcactctag cggacaaaaa agcagctatc gcttcgatgc
     6241 tcatctgtat catctttcta cctttagaaa tatagaacat tattcgccaa gtcctgagtc
     6301 aaatacaagt gccagtcttc attacaagaa attctttgga tctcacattt ttgatgttgg
     6361 gtttgattat tcactaaaaa ctaacaggta ctatggcttt aaacctgatg
//
LOCUS       DASCQP010000082         4894 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000368072, whole genome shotgun sequence.
ACCESSION   DASCQP010000082 DASCQP010000000
VERSION     DASCQP010000082.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4894)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4894)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4894
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000368072"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..238)
                     /locus_tag="QF480_01395"
     CDS             complement(<1..238)
                     /locus_tag="QF480_01395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05246.1"
                     /translation="MKKRQNPVLFWTPRILVIIFAAFISLFALDVFSENKGFLETFIA
                     LLMHLIPTAIIIISLVVAWRWELFGAVFYFALGIF"
     gene            complement(344..619)
                     /locus_tag="QF480_01400"
     CDS             complement(344..619)
                     /locus_tag="QF480_01400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05247.1"
                     /translation="MFFLLAFCDPEGGNNNAYHMYVSNVHKQTERYQLNYKFNDLLIK
                     KVPNWGKTDRGYRTSNGFKTKTEAEASRKQVIESYSSTNFKIHELNW"
     gene            complement(579..1847)
                     /locus_tag="QF480_01405"
     CDS             complement(579..1847)
                     /locus_tag="QF480_01405"
                     /inference="COORDINATES: protein motif:HMM:NF024907.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VCBS repeat-containing protein"
                     /protein_id="HJN05248.1"
                     /translation="MWKNYLLLLLFLFIKSNIGAQIFEKAKTDFSGVMQPVTSWIDFG
                     DKKDLKAYLAGDYFKDDKHIVVSQVNTHFSKNKFKRVTTNLPALYRGDAAVSDYDNDG
                     DEDIIVTGLTADNQMLMQLYQNNGENRFTPIREIFTPLIDGSVEWGDFDNDNDIDILI
                     TGKQANNNLSTNIYRNDKGYFTKLDVGIPGVYNGNATWSDYDNDNDLDILITGNVGGN
                     PYTAIYKNTSNKYSMLSQRFIPLMNSAAAWGDFDNDGLVDFIISGADNDGYPLCLIYK
                     NQSGSLFEEVYISCRPLMGCSIDLGDYDNDGDLDIIMTGESLERSYTIVYKNKLKFDF
                     ENIVAGLPGVADGNALWGDFDKDGDLDILMAGLTICYEFIGDIYINTSNPPKIVTSNN
                     IFIDSPNPDTKIGPFYYYVFSSCFLRSRRR"
     gene            complement(1903..2310)
                     /locus_tag="QF480_01410"
     CDS             complement(1903..2310)
                     /locus_tag="QF480_01410"
                     /inference="COORDINATES: protein motif:HMM:NF012301.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HJN05249.1"
                     /translation="MEMLTNTQEINELNTDYSSKSILVVDDVQINYLLVKALLKQTGA
                     KVIWADDGFKAIDIVNSKRKIDLVLMDYNMPGMDGSTTTKIIKRKKKDLPVVLHSTYS
                     NGLKLDNSVGVYNDILVKPVTSLMLLSIMKKYI"
     gene            complement(2494..3195)
                     /locus_tag="QF480_01415"
     CDS             complement(2494..3195)
                     /locus_tag="QF480_01415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05250.1"
                     /translation="MRTVIVRFHLLTFVLLFCFVSTSFLYEKNEQRQDYVITLDNDTL
                     HGYIDYKNYKQTPVHILFKESLGGSGFFYTPKTISGFYTAGKLYRSAIVKIDQSALKT
                     IELTLFPESQFIIDTVFLQAIILGERELYYLKDSTGNESFYIKQDSKYDWLIYKKYQK
                     KQKDKKLVVANNNYIGQLLLYLQNCPSINSVLSEATYDMKSLSKVYYYYYDCTNSKLI
                     YREKEKKLKLFFWLK"
     gene            complement(3192..>4894)
                     /locus_tag="QF480_01420"
     CDS             complement(3192..>4894)
                     /locus_tag="QF480_01420"
                     /inference="COORDINATES: protein motif:HMM:NF013123.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DPP IV N-terminal domain-containing protein"
                     /protein_id="HJN05251.1"
                     /translation="FIAYTAGNNIFISIDGNVHQVTFDEDKEIVNGQAVHRVEFGITK
                     GIFWSPDSKNLAFYRKDETMVTNYPLVDISSRIAKIENTKYPMAGMNSHQVTLGVYNL
                     ETEKTVFIKTGEPANQYLTSITWGPEGEYIFIGLLNREQDHLRLNKYNASNGELVSNI
                     LEEQNPKYIEPENPMYFLPDRKDHFIWQSEQDGWNHLYLYNTKGELIKQLTKGNWVVT
                     DLLGYYGDNKIWFRGTKDSPLENNIYSLDIGSDKITRISPYQGSHTAYVNNSGKYIID
                     IFSNTKISREYILLNNKGKKLRVIKEDKQPLADYKLGEMTIFTLKSNAGDDLYCRLIK
                     PIDFDSTKKYPVIIYVYGGPHSQLITNSWLGGAGLFLNYLAEQGYVIFTLDNRGTANR
                     GREFEQIIHRNLGLYEAEDQMVGVDYLKSLPYVDSTRMGVDGWSYGGFMTIDLMLTYP
                     GVFKVGVAGGPVIDWSYYEIMYGERYMDTPEENPEGYKNSNLLNKVDKLEGKLLIIHG
                     TKDPTVVWQNSLQFLKHAIDNDKDIDYFVYPGHGHNMRGKNRVHLYKKITTFFNDYLK
                     "
BASE COUNT         1579 a          905 c          692 g         1718 t
ORIGIN      
        1 agaaaatacc tagggcaaaa taaaatactg caccaaataa ctcccatcgc caagccacaa
       61 ctagtgagat aataattatt gcggttggaa taagatgcat tagtaatgca ataaatgttt
      121 ctaagaagcc tttattttca ctaaaaacat ctaaagcgaa taaacttata aatgcagcaa
      181 atattattac caaaattctt ggagtccaaa ataaaacagg attttgacgt tttttcatct
      241 gtttaatata ttgttatcac taatttgtaa agatactcca atgcaaaaaa attgtcaagt
      301 aaattttcgt caataatttg ttgtctttta attaaattag ttactaccaa tttaattcat
      361 gaattttaaa gtttgtggaa ctataagatt caatcacttg ttttctagaa gcttcggctt
      421 ctgtctttgt tttaaatccg tttgatgtac gataaccgcg atcagtttta ccccagtttg
      481 gtactttttt tataagcagg tcgttaaact tataatttaa ctgatatctt tcagtttgtt
      541 tgtgtacgtt acttacatac atgtgataag cattgttatt acctccttcg ggatcgcaaa
      601 aagcaagaag aaaaaacata atagtaaaaa ggtcctattt tagtatcagg atttggtgaa
      661 tcgatgaaga tattattgct tgtgactatt ttagggggat tagaggtgtt aatataaata
      721 tccccaataa attcataaca aattgttaaa cctgccatta atatatctag atcaccatct
      781 ttatcaaagt ctccccataa agcattacca tcagccactc ctggcaaacc cgcaacaata
      841 ttttcaaaat cgaacttaag tttgttttta taaacaatag tatatgatcg ttctaacgac
      901 tcaccggtca ttataatatc cagatcgccg tcattatcat aatcccctaa atcgatgcta
      961 caacccatta agggcctaca cgaaatgtac acttcttcaa ataatgatcc agattggttt
     1021 ttatagatta aacataatgg atagccatcg ttatctgccc cactgatgat aaaatctaca
     1081 agcccatcat tatcaaaatc gccccaggca gcagcactat tcataagtgg aataaatcgc
     1141 tgagacaaca tactatactt gttgctagta tttttataaa ttgctgtata tggatttcca
     1201 ccaacgtttc ctgttattaa tatgtccaga tcattatcgt tatcgtaatc actccaggta
     1261 gcatttccgt tgtaaacgcc tggtattcca acatctagtt tagtaaaata tcccttgtcg
     1321 ttacggtaaa tgtttgttga gagattgttg tttgcctgtt tgccggttat aagtatatca
     1381 atatcattat cattatcaaa atcaccccat tcaacagaac catctattag tggagtaaaa
     1441 atttccctaa taggagtaaa tcggttttct ccattatttt gatagagttg cattaacatt
     1501 tggttatcag cggtgagacc tgtaacgata atatcttcat caccatcatt atcataatcg
     1561 cttactgcag catcacctct gtatagtgca ggaaggtttg ttgtaacacg cttaaattta
     1621 tttttgctaa aatgggtatt aacctgagaa acaactatat gtttgtcatc tttgaaatag
     1681 tcgcctgcta aataggcttt caaatctttt ttatcaccaa aatctatcca agatgtaact
     1741 ggttgcatca ctccagaaaa atcagttttt gctttctcga atatctgcgc ccctatgtta
     1801 cttttaataa aaagaaatag taataacagc aaataatttt tccacatagc ttagttgaaa
     1861 attaatgcct aaaaatagta acaatttatt aaaacagtga acttatatat actttttcat
     1921 aatgctgagc aacattagtg aagtaactgg cttcacaagt atatcattgt aaactccaac
     1981 ggaattatcc aacttaagtc catttgaata agttgaatgt agtactacag gaagatcctt
     2041 tttctttcgt ttaataatct ttgtagtggt gctgccatcc atccctggca tattgtaatc
     2101 cattaatacc aagtcaattt ttcttttaga attaactata tcgattgctt taaaaccgtc
     2161 atcagcccaa attacctttg cgccagtttg ttttaaaaga gccttaacca ataagtagtt
     2221 aatttgtaca tcatcaacaa ctaaaattga cttactacta taatcggtgt ttagttcatt
     2281 tatttcctgg gtatttgtta gcatctccat tcctttagtt tttaatatga aatggaattg
     2341 tccatattca tgccaaacaa agtaacatct tgttaattag gaatatacta actatctgga
     2401 aataaactaa tatcctttaa ataaacgcat ttccaatatt gggaattttt tacggagaaa
     2461 atgaaacgta tatactttag aaaaaacagt ttcttattta agccaaaaaa ataatttcag
     2521 ttttttttct ttttccctat atattaattt tgagttagta caatcatagt aatagtaata
     2581 aactttggat aagcttttca tgtcatacgt tgcttctgaa agaacagaat ttattgaagg
     2641 gcagttttgt aaataaagta atagctgacc aatataatta ttgttagcta ctaccaattt
     2701 tttatccttt tgtttctttt gatacttttt gtatatcagc cagtcatatt tcgaatcttg
     2761 cttaatgtag aaactttcat tgccagtaga gtctttcaaa tagtacaatt ccctttcacc
     2821 aagaattatt gcttgcagaa aaaccgtatc aataataaat tgagattctg gaaacaatgt
     2881 taactctatc gtttttaatg cgctttgatc aatttttaca attgcgcttc tgtatagttt
     2941 acctgcagtg taaaaccccg aaatagtctt tggcgtataa aaaaaaccac tacctcccaa
     3001 tgattcttta aatagtatat gtaccggagt ttgcttatag ttcttgtaat caatatatcc
     3061 atgcaaagta tcattgtcta aagtaattac ataatcctgt ctttgttcat ttttttcata
     3121 taaaaagcta gttgaaacaa agcagaatag taatacaaaa gttaacagat gaaatctcac
     3181 tataacagtt ctcattttaa ataatcatta aaaaacgtag ttattttttt atagagatgt
     3241 accctgtttt tacctcgcat attgtgtccg tgtccgggat aaacaaagta atcgatatcc
     3301 ttgtcgttat ctattgcatg ttttagaaac tggagactgt tttgccaaac cactgttgga
     3361 tctttagtgc catgaataat tagaagcttc ccctccagct tatcaacttt attcaacaaa
     3421 ttcgaattct tgtatccctc tggattttcc tcaggtgtat ccatatatcg ttctccgtac
     3481 ataatttcat agtaactcca gtcaattaca ggtcctccag caacaccaac tttaaaaact
     3541 cccggataag taagcataag atcaattgtc ataaaaccgc cataactcca tccatcaacg
     3601 cccattcttg tagaatcaac atacggtagc gacttcagat aatctactcc aaccatctga
     3661 tcttccgcct catagagtcc aagatttcta tggattattt gctcaaattc acggccgcgg
     3721 tttgctgttc ctctattgtc aagtgtaaaa ataacgtatc cctgctcagc taaataattc
     3781 aaaaacaggc cagctcctcc taaccacgaa ttagttataa gctgagagtg aggacctcca
     3841 taaacatata taataacagg gtattttttt gtgctatcaa aatcaattgg tttaatcaat
     3901 ctacaatata gatcatctcc agcgtttgac tttaaagtga aaattgtcat ttcacccagt
     3961 ttatagtcag ccaatggctg cttatcctct ttaattactc ttagtttttt acctttatta
     4021 ttaagcagaa tatactcacg gctaatctta gtgttactaa aaatatcaat gatatatttt
     4081 cctgaattgt ttacatatgc agtatgactc ccctgatatg gtgatattct tgttatttta
     4141 tcagatccga tatccaatga ataaatatta ttttcaagcg gactatcctt tgtccctcta
     4201 aaccagatct tattatctcc ataataaccg agcaaatcag taacaaccca attacccttg
     4261 gttaactgtt tgatcagttc accctttgta ttgtataaat aaagatgatt ccatccatct
     4321 tgttcacttt gccagataaa atggtctttt ctgtcaggta aaaaatacat tggattttca
     4381 ggctctatat atttaggatt ttgctcttcc agaatattgg ataccagctc accatttgag
     4441 gcattatact tgtttagcct cagatgatct tgttcacgat ttaataaacc aataaaaatg
     4501 tattcacctt ctggtcccca tgttatagat gttaaatatt gattagcagg ttcaccagtt
     4561 ttaataaaaa cggttttctc agtttcaaga ttataaacgc caagagtcac ttgatggcta
     4621 ttcattcctg ccattggata ttttgtgttt tcaatttttg ctattcgtga agaaatgtca
     4681 accaaggggt aattcgttac cattgtttca tctttacgat agaaagctag attttttgag
     4741 tcaggtgacc aaaatatacc tttagttatt ccaaactcta cacggtgaac agcttgtccg
     4801 ttaacaatct ctttatcctc atcaaaagta acttgatgta catttccatc tatactgatg
     4861 aatatattat tgccagctgt ataagcaata aacc
//
LOCUS       DASCQP010000083         1545 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000370802, whole genome shotgun sequence.
ACCESSION   DASCQP010000083 DASCQP010000000
VERSION     DASCQP010000083.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1545)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1545)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1545
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000370802"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            170..>1545
                     /locus_tag="QF480_01425"
     CDS             170..>1545
                     /locus_tag="QF480_01425"
                     /inference="COORDINATES: protein motif:HMM:NF013100.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /protein_id="HJN05252.1"
                     /translation="MTELKKDILWRVYIVYFVILVFGIAVIGKVIYIQVKEGVQLKAK
                     AQTQELKVFDLDANRGNILDNKGSLLATSVPIFEVRFDVSSPYISDELFKNKIDSIAI
                     GLSNILNLPPAKFRRSLITARNKGNRYLLLARRVSYNQLKQIRELPILRNGKYAGGLI
                     VIQKTKRAKPYNELAARTIGWVNEKEKLFVGLEGAYTDVLSGKNGKMVMRRINQGDWI
                     PIHDENEIEPRDGLDIVSTIDIHIQDVTEHALLKQLLAHKAFQGCAVVMEVNTGHIIS
                     IANLRYDSSDSKYKETYNYAIGESIEPGSTFKLASILAALEDDKIKLTDSLFTGEGYT
                     RYYNREMKDVHKIGNGRITVRDAFEYSSNVGISRMIYESYKEHPEKFINRLYSMSLNQ
                     PIGMKIIGEGIPKIKHPSKKQTWYGTSLPWMSIGYELTITPLQTLTYYNAIANNGVMV
                     KPTFVSEI"
BASE COUNT          586 a          253 c          288 g          418 t
ORIGIN      
        1 acataaggca aattaataga ctcaggaaag agctcaaaga gttgcgctat gaatacataa
       61 atgtaaaaac aatgttaatg gagatcgaaa agcaatcaca aattgctaaa aaactcgaaa
      121 aaaaaggcat taaaaaaaac aatcaacctg ttaaaatatt agaagtaaag tgaccgaact
      181 taagaaagac atattgtgga gagtttatat cgtgtatttc gtaatacttg ttttcgggat
      241 agctgtaatt gggaaggtaa tttacattca ggttaaagaa ggtgttcagt taaaagctaa
      301 agctcaaact caagaactca aagtatttga cctggacgcc aatcgtggta atattctcga
      361 taacaaaggt agtcttctgg caacgtctgt tccaatattc gaagttcgtt ttgacgtctc
      421 atcaccttat ataagtgatg aactattcaa aaataaaatt gattcaattg ccattggatt
      481 atccaacatt ttaaaccttc ctccagcaaa gtttaggagg tcacttatta ctgcacgtaa
      541 taaaggaaat cggtatttat tattggccag aagggtttcc tacaatcaat taaaacaaat
      601 cagggaacta cctatactac gaaatggaaa gtacgcaggg ggtttaatcg ttattcaaaa
      661 aactaaaagg gctaaaccat ataacgagct ggctgccagg actatcggat gggtaaatga
      721 aaaagaaaaa ctttttgtcg ggctcgaagg tgcatatact gatgtgctaa gcggtaaaaa
      781 cgggaaaatg gttatgcgta gaataaacca aggagattgg ataccaattc acgatgaaaa
      841 tgaaattgaa ccaagagacg gattagacat agtatcaacc attgacattc atatacagga
      901 tgtaacagaa catgcacttt tgaaacaatt gttagcacat aaagctttcc agggatgtgc
      961 agttgtaatg gaagttaata caggtcatat tatctctatt gcaaacctga gatatgatag
     1021 tagtgactcc aaatacaagg aaacttataa ctacgctatc ggcgaaagta ttgaacccgg
     1081 atctacattc aaattagctt caatacttgc tgctttggaa gatgacaaaa taaagcttac
     1141 cgacagtctt ttcactggtg aaggatatac acgatattat aacagagaaa tgaaggatgt
     1201 tcataaaatt ggtaatggta gaataacggt aagagatgct ttcgaatact cttcaaacgt
     1261 tggcatatca cgtatgattt acgaatccta caaagaacat cctgaaaaat tcattaacag
     1321 attatattca atgtcattaa accagcctat cggaatgaag ataataggcg aaggtatccc
     1381 taaaataaag catccatcta aaaaacaaac atggtatggt acttctttac catggatgtc
     1441 gattggctat gaacttacaa taactccttt acaaacactc acttactaca atgcaattgc
     1501 aaacaatgga gtaatggtaa aacccacttt tgtatcagag ataaa
//
LOCUS       DASCQP010000084         4825 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000371137, whole genome shotgun sequence.
ACCESSION   DASCQP010000084 DASCQP010000000
VERSION     DASCQP010000084.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4825)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4825)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4825
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000371137"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..471)
                     /locus_tag="QF480_01430"
     CDS             complement(<1..471)
                     /locus_tag="QF480_01430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05253.1"
                     /translation="MNSSLRILLAFALIAGNLLLVAQDKMLTLKDATYMNRELYPASV
                     SQLQWIGQSSYYAYAKDNSIYKVGAKNGTETLLLDIDMLNSSLNEHNYDSLKRLPRLK
                     FFSDDACRFKSKNNYFVYNYNVHELHWINSVPDTAENINFEKDTRFIAYTAGNNI"
     gene            complement(516..1097)
                     /locus_tag="QF480_01435"
     CDS             complement(516..1097)
                     /locus_tag="QF480_01435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05254.1"
                     /translation="MKTINHFLLFVMLGVLAPHAIISQEINPILYENTWQDNEIRSMN
                     GYNITKIFGQLPNDDATYNYSPITAVGYKNLSTLESNFKKVAEVQKWEPKVLEENLVS
                     LQKNAVGGQIQIYLTRYTEERANFQWFFVIIRGIDDKGKIWEYDLPYQAPQNPVNSGW
                     WNYTTIEVPVDLPDKFYIYLDDKKVNFYQTSNS"
     gene            complement(1156..1884)
                     /locus_tag="QF480_01440"
     CDS             complement(1156..1884)
                     /locus_tag="QF480_01440"
                     /inference="COORDINATES: protein motif:HMM:NF003198.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047294 - phosphoglycerol
                     geranylgeranyltransferase activity [Evidence IEA];
                     GO_process: GO:0006650 - glycerophospholipid metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="geranylgeranylglyceryl/heptaprenylglyceryl
                     phosphate synthase"
                     /protein_id="HJN05255.1"
                     /translation="MNAIELFNKQKKQLAVLIDPDKLSPDQLANTSDIAQKAGVDFLF
                     VGGSLMTSDTLFHCIRTLKENSNIPVILFPGNSYQISRNADAMLFLSLISGRNPDMLI
                     GMHVLSAPYIKLSGLETIPTGYMLIDSGKPTSVTYMSNSFPIPNNKKDIAACTAMAGE
                     MLGLRTIFMDAGSGALQTVPEEMISFVKGSIEIPLIIGGGIRTAEKAKSVIEAGADII
                     VVGNHFEENPELIYDFAETIATFN"
     gene            complement(2158..3303)
                     /locus_tag="QF480_01445"
     CDS             complement(2158..3303)
                     /locus_tag="QF480_01445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05256.1"
                     /translation="MRNHNNTTSNFRSYWQLNANAGSSLFFGDIKQYQIWPVSNNENE
                     WRYAGGFQLIKQISPIFGLRGQVLFGQLSGTRRSLNKYFETDYIEFNLNTTVSLRNIV
                     SKYRSNQFWNIYFSIGVGITNYNTEVKDLTTKQVIQRVGYGNGSSFGGRTLQGILTGG
                     LGIDLRLSNKWSLNLESANRIMNSDDMDGKISGFKYDVYNYTSVGFSFKFGKSNRVKT
                     DDNYSYFKQKEKSKDEDEGDYHYNKPLEPPQIDLLNVAPVTVSKLISPPIEEKVIKEP
                     VEIVVVEQQPEVIQIEPISGLEYRVQISAKYDRAISIQHLSNLYNIPASEIRENTYNG
                     FYIYTVGSFQSYEQARERRNQLRSYNKIYDAFVVAFSNGQRLNKLPQ"
     gene            complement(3488..>4825)
                     /gene="lysS"
                     /locus_tag="QF480_01450"
     CDS             complement(3488..>4825)
                     /gene="lysS"
                     /locus_tag="QF480_01450"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005933487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004824 - lysine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006430 - lysyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HJN05257.1"
                     /translation="HVKEFTILSKSLRPLPIVKEKDGEVYDAFTDPDQRYRQRYVDLI
                     VNDGVKDTFVKRAKVIRSMRDFLNSFGYLEVETPILQAIPGGAAAKPFKTHHNALNIP
                     LYLRIANELYLKRLIVGGYDGVYEFAKDFRNEGMSRFHNPEFTQMEIYVAYKDYFWMM
                     EMTEQMVEKIALDLHGTTKVQVGDNILDFKTPFKRLSILDAIKEYTGYDVSSMDVEQL
                     VDVCNKLGVGTDPSMGKGKLIDEIFGEKCESSFIQPTFITDYPVEMSPLCKRHRGNPE
                     LTERFELMVNGKELANAYTELNDPIDQRKRFEEQMELAAIGDDEAMVIDQDFLRAIEY
                     GMPPTSGMGIGIDRLVMLMTNQPSIQEVLFFPQMRPEAVKKIFTAEDYVNLGISPDWA
                     QYLIPAGFVNPETLKKSKPTVIQQKLNGYRKKNKLDIPSIQIEDINNWLAIIN"
BASE COUNT         1496 a          886 c          745 g         1698 t
ORIGIN      
        1 tatattattg ccagctgtat aagcaataaa ccgagtatct ttttcaaaat taatattctc
       61 agctgtgtca ggaacactat ttatccaatg caattcatgc acattataat tgtaaacaaa
      121 ataattattc ttgctcttaa atctgcaggc atcatcacta aaaaacttta atcgtggtaa
      181 tcttttcaat gaatcataat tatgttcatt caagctgctg tttaacatgt cgatatctaa
      241 caacaaagtt tctgttccgt tctttgcacc aaccttgtaa atagaattat cttttgcata
      301 tgcataatag cttgattgtc caatccattg taattgcgat acagaagcag gataaagctc
      361 acgattcata taagtagcat ctttaagagt aagcatctta tcttgagcta ctaataataa
      421 gttcccggcg attaaagcaa aagccagtaa aattcttaat gaactgttca ttgtgaatta
      481 attaatttgt tatggttggg agcttgattt ttcaactaag aatttgaagt ctgataaaaa
      541 ttcacttttt tatcatcaag atagatataa aatttatcgg gtaaatcaac gggtacctca
      601 atagtcgtat agttccacca accactgttt acaggatttt gtggtgcttg atatgggaga
      661 tcgtactccc atattttacc cttgtcatca ataccacgaa tgataacaaa gaaccattga
      721 aaatttgccc tttcttcagt atatcttgtt aggtaaattt gaatttgacc tccaacagcg
      781 ttcttttgaa gacttactaa gttttcctcc aatacttttg gttcccattt ttgaacttct
      841 gcaaccttct taaaattact ttcaagagtg cttaaatttt tatatccaac tgctgtaata
      901 ggtgaataat tgtaagtagc atcatcatta ggtaattggc caaaaatctt tgtaatatta
      961 tatccgttca ttgatcttat ttcgttatcc tgccatgtat tctcataaag aattggatta
     1021 atttcttgag aaataatggc atgcggagca agtactccaa gcataacaaa cagcaaaaag
     1081 tggtttattg tcttcatttt tttaaagttt aaattgaact taaaaaatta ttttatatga
     1141 attgtaatgt tgtttttagt taaatgtagc aatggtttca gcgaaatcat aaatcaattc
     1201 agggttttct tcaaaatgat tacccacaac aataatatcg gccccagctt caattacact
     1261 ttttgctttt tctgctgtac gtatacctcc tccgataatc aaaggtattt ctattgatcc
     1321 tttaacaaaa cttatcattt cttcaggaac agtttgtaaa gccccactac ccgcatccat
     1381 aaaaatagta cgcaggccaa gcatttcacc tgccatagcg gtacatgctg caatatcctt
     1441 tttgttgttg ggtataggaa acgaattact catatatgtt actgatgtag gcttgccgct
     1501 atcaattaac atataacctg tagggatagt ttcaagtccg cttagtttta tatatggtgc
     1561 tgacaacaca tgcataccta taagcatatc agggtttctc ccagatatta gtgataagaa
     1621 taacatggca tcagcatttc ggcttatttg ataagaatta cctgggaata atataacagg
     1681 gatattactg ttttctttca aagtacgtat gcaatgaaac aaggtatcgc ttgtcatcag
     1741 actacctcca acaaataaaa aatcaactcc tgctttttgc gctatatcag atgtatttgc
     1801 taattgatcc ggtgacaatt tatccggatc aattagtact gccagttgct ttttttgttt
     1861 attgaaaagt tcaattgcat tcatatactt gcttttcaac aaaaatagta aattattagt
     1921 gaatgcctat ttgatattcc ttgtgatttg cttattgatt gttaacaata tagcaattta
     1981 aaaacgaaga ggaactaaca gcctattagt aggttcaacg attacaaaaa tcacactaat
     2041 atcattgaca aatagattgc cataccaact gatgcaacta taatccaaaa tgttacaact
     2101 ttcggaagct tatctttttt tgggtcataa tcaaagtcac tttcaggcat agtaaactta
     2161 ttgtggtagt ttattcagtc gttgtccgtt actaaaagca acaacaaaag catcatatat
     2221 tttattgtag cttcttagtt ggtttcttct ttcacgcgct tgttcgtaag attggaaaga
     2281 gccaactgta tagatgtaga aaccattata agtattttct cgaatctctg aagcagggat
     2341 gttatataaa ttactaaggt gttgtatcga aatcgctcta tcatatttag cacttatttg
     2401 aactctgtat tctagtccag aaatgggttc aatttgaata acttcaggtt gttgttcaac
     2461 tacaactatc tcaactggtt cctttattac tttttcttca atcgggggtg aaattaactt
     2521 ggatacagtt actggtgcaa cgttaagtaa atcaatttga ggtggctcaa gaggtttgtt
     2581 gtaatgataa tcgccctcat cttcatcttt tgatttctct ttttgcttaa aatagctgta
     2641 attatcatca gttttaactc gattactttt tccaaattta aaggagaatc caactgaagt
     2701 ataattataa acatcatatt taaatccgct gatttttcca tccatatcat cggaattcat
     2761 aattctgttt gccgactcta agtttaaact ccacttgtta cttagtctca gatctatacc
     2821 tagtcctccg gtaagtatcc cttgtaaagt tctcccacca aaactacttc cgtttccata
     2881 acccactctt tgaatcactt gttttgtcgt cagatctttc acttccgtat tgtaatttgt
     2941 aatacctact ccaattgaga aataaatatt ccagaattga tttgatcggt atttgctaac
     3001 tatatttcga aggctaacag ttgtgttgag gttaaattca atataatctg tttcgaaata
     3061 tttgttcaga cttcttctgg ttcctgacag ttgaccaaat agtacctgtc ctcttaatcc
     3121 aaaaattggt gatatttgct taattagctg aaatcctcca gcgtaccgcc actcattttc
     3181 attgttagaa acaggccaaa tttggtattg cttaatatca ccaaaaaaaa gacttgaacc
     3241 agcatttgcg tttagttgcc aatacgatct gaaattactt gttgtattat tatgattgcg
     3301 caataatccc agtaggtatg agaattaaga aaacgagaag tattaaaaaa tttctcaaga
     3361 tagctggttg ttagcaaaac atgatacaaa tataggtttg cataacagat tttatcggta
     3421 aattttcgca aacccaaaat gacgacccta aaaatataaa attaatctat gtttttgaga
     3481 atgtgaatta attaattatc gccagccaat tgttaatatc ttcaatctgg attgacggaa
     3541 tgtctaattt gtttttcttt ctatatccgt ttaatttttg ttgtattacc gttggttttg
     3601 atttcttcaa ggtttcagga tttacaaagc ctgcaggaat taaatattgg gcccaatcag
     3661 gtgaaattcc aagatttaca taatcttcag ctgtaaagat ctttttaaca gcttcagggc
     3721 gcatttgggg gaaaaataat acttcttgta tggatggttg attagtcatt agcattacaa
     3781 gcctgtcgat tccaataccc attcctgatg tgggcggcat accatattca atagcacgaa
     3841 gaaaatcctg atcaattacc atagcttcgt catcaccaat tgcagcaagt tccatttgtt
     3901 cttcaaatct ttttcgctga tcaataggat catttaactc cgtgtatgca ttggctagct
     3961 ctttgccgtt aaccatgagc tcaaaacgtt cagttagttc agggttaccc cgatgtcttt
     4021 tacacaaagg agacatttca acaggataat cagttataaa tgtaggttgt ataaatgagc
     4081 tttcacattt ttctccaaat atttcgtcaa ttagctttcc tttgcccatc gacggatcag
     4141 ttccaacacc tagtttatta catacatcaa ctaattgttc aacatccata ctacttacat
     4201 cgtagcctgt atattcttta attgcatcaa gaatgcttaa tcgcttgaac ggagttttaa
     4261 aatccaaaat attgtcccca acctgaactt tagtggtacc gtgcagatcc agagcaattt
     4321 tttcaaccat ctgctctgtc atttccatca tccagaaata atctttgtaa gctacataaa
     4381 tttccatttg tgtaaattca ggattatgaa aacggctcat accttcattt ctaaaatctt
     4441 tagcgaattc ataaactcca tcatatcctc caacaataag tcttttaaga taaagttcat
     4501 ttgcaattct caagtaaagt ggaatattga gtgcattatg atgtgtttta aatggctttg
     4561 cggctgcacc ccctggaatt gcttgaagaa taggtgtttc gacttccaga tatccgaatg
     4621 aatttagaaa atctcgcatt gaacggataa cctttgccct ttttacaaat gtatctttta
     4681 caccatcatt tacaatcaaa tcaacatatc gctgacgata tctttgatcg gggtcagtaa
     4741 aggcatcgta aacttcgcca tctttttctt tcacaattgg taatggccgt aatgattttg
     4801 acaggatagt aaattcctta acatg
//
LOCUS       DASCQP010000085         6351 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000377832, whole genome shotgun sequence.
ACCESSION   DASCQP010000085 DASCQP010000000
VERSION     DASCQP010000085.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 6351)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6351)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6351
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000377832"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..859
                     /locus_tag="QF480_01455"
     CDS             <1..859
                     /locus_tag="QF480_01455"
                     /inference="COORDINATES: protein motif:HMM:NF014774.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HJN05258.1"
                     /translation="TGLNTVFSNIENNGAPWQFSPEDRMLWAEGLEIPLMSDGMSPEY
                     LFWVSSAGAFDDRYKKVTREFVKVLNHLKVDYAVLGVEEADSGDVARRAGNEMLYQMQ
                     AMMNIEVLNGYEVKNIITCDPHDFNTLKNEYPDFGGKYNVIHYTQFMQQQISSGNLKI
                     DSDMFAGKKITFHDPCYLGRCNNEYDAPRSVLGLLPAVNVEMERTKSFALCCGAGGGQ
                     MFKEAENGNKEVFIERTEEALETGCDIIATACPFCMVMMTDGLKYKNKEEEIKNLDIA
                     ELISMSLSL"
     gene            904..2274
                     /locus_tag="QF480_01460"
     CDS             904..2274
                     /locus_tag="QF480_01460"
                     /inference="COORDINATES: protein motif:HMM:NF024877.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reductive dehalogenase domain-containing
                     protein"
                     /protein_id="HJN05259.1"
                     /translation="MSISNFELLDLLLILSGIAIFVFFIYAAIVSLIEKEKKAASNFI
                     LIGLIAPVPFLLTGFYVFQYQPLVSIVLLSSIFILLMIYFLPIRFTSKVRDISPEGRI
                     DERDIMFSRRKLEEDTENFKDYYSKNPDKLKIDSKINRNPGLLKPASGNYDPFMGSSA
                     DASFDTVDLLSPHVDGKISSRKISSNPNSITKYIKNWSKKLGALDVGITELKEYHKYS
                     NRGRENNYGDKVVLDHKFAIAFTVEMNHMAIRSGPYYPTVMESAQQYLAAGAIAVQLA
                     KFIRQLGFPARAHIDGNYELICPLVAKDAGLGEIGRMGILMTPKYGPRVRLAVVTTDI
                     PLIVDSRSFAPDVIDFCDNCNKCAVNCPANAISYSNRKNINGVTRWQINQESCYDFWT
                     KCGTDCGRCLSDCPYSHPNNLLHSIVRFGIRNSTIFSRIAMVLDDIIYGKKPAIQSPP
                     DWMKVN"
     gene            complement(2317..2682)
                     /locus_tag="QF480_01465"
     CDS             complement(2317..2682)
                     /locus_tag="QF480_01465"
                     /inference="COORDINATES: protein motif:HMM:NF012621.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HJN05260.1"
                     /translation="MKTKLFLTTIIITLSIIGLQAQDKKPKNEKKLETVEIQTSAVCG
                     MCKEKLEHDLAFEKGVRFVELDNKTKVLTIKFKKGKTTKENLKKAVTKVGYDADELQA
                     EQKAYDALPACCKKDVAPH"
     gene            complement(2694..4913)
                     /locus_tag="QF480_01470"
     CDS             complement(2694..4913)
                     /locus_tag="QF480_01470"
                     /inference="COORDINATES: protein motif:HMM:NF019335.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HJN05261.1"
                     /translation="MKKCLLIALIITMQGLNLFAQQANGQVFEVINDKEIPLIGATIV
                     QLNTQNGVITDANGFFQIDLESAFPKVLVVSFVSYQNDTIFLERVGFDNIHVVLNETK
                     DLNEIEIKARQKGSFLERNQVMAIVNLNENELQKAACCNLSESFENSATIDVSYSDAV
                     TGAKQIQMLGLAGIYTQLLTENVPNMEGLATPWGLSYIPGSWMKSIQVSKGTSSVING
                     YSSMTGQINIEYKKPDEGEKLFLNGYGNQKGKNEGNIVSRFQINDKLSTAIFVHGESM
                     TVKHDLNDDSFLDQPLVKQINLFNRWRYYNKQFRTNFGIKYLTENRQGGQVKFDPDKD
                     HNIENGYGIGVRTNRYEGFLKMAYIFKHRASTNFGFQNQLVVHHQNSYFGLTTYDAKQ
                     LSYYGNLMFQSWIVNQRHQFTTGLSYKFDKYNEDLNDSTFIRTEKVPGSFIQYTFSNN
                     KNLNIIAGIRVDNHNLYGVLFTPRIHARINLNEQNVLRLSAGKGYRTPNVIAENTSLL
                     ATSKKLVLTEELKIESSWNFGLSYTIYINVMARELIITTDYFRTQFENQIIIDREKKP
                     NFIYVDNLNGRSFSNSFQIESDYELFKNFNIKLAFRYNDVKTTISEKLQEKPLVSKFK
                     GLLALSYQTSLKTWQFDINIQAIGNQRLPYTGFYPEEYQQPAYSPDYTLVNAQITRYF
                     NKFEVYIGGENLGNFRQMNPIIAANDPFSEYFDSSIVWGPITGIKIFAGFRFKLEPK"
     gene            complement(5114..>6351)
                     /locus_tag="QF480_01475"
     CDS             complement(5114..>6351)
                     /locus_tag="QF480_01475"
                     /inference="COORDINATES: protein motif:HMM:NF012711.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AMP-dependent synthetase/ligase"
                     /protein_id="HJN05262.1"
                     /translation="SGTTGLSKGVMLTHNNVVSNFLLAHQYVTYVGPNDRALSFLPLS
                     HVLERVGNYLWQSQGLIIYYAENIETIGDNMREIKVNAFITVPRVFEKVYDKIINKGR
                     QLSGIKKALFFWAVKIGDKFDPNPAKRSAVYNRKLAIANKLIFSKWRDALGGELKGVI
                     CGGAALQPRLARIFWAAQIIVQEGYGLTETSPLISANRPSYPGVRFGSVGIVPDVLEV
                     MIAEDGEILERGPNLMKGYYKDPDKTKEAIDKDGWFHTGDIGTLDENKMLTITDRKKE
                     IFKLSGGKYVAPQPVENHFKESQFIEQIMVVGENEKFTAALIIPNYEYLHNWCSLHDV
                     TFQDNHDLIKKQKIIDRYQTEVDKYNIEFDHVAQIKVFRLIADLWTADNGMLSPTQKL
                     KRKVVIKEYSKVLDEIYEK"
BASE COUNT         1987 a         1112 c         1093 g         2159 t
ORIGIN      
        1 cactggatta aacaccgtat tttctaacat tgaaaacaat ggtgctccat ggcagttctc
       61 acctgaggac agaatgcttt gggcagaagg acttgaaata cctttaatgt cggatggtat
      121 gagtcctgaa tacctcttct gggtgagctc agcaggtgct tttgatgaca ggtacaaaaa
      181 agtaactcga gagtttgtga aggttcttaa tcacttgaag gttgattatg ctgtacttgg
      241 agttgaagaa gctgatagtg gtgatgttgc tcgcagggca ggaaatgaaa tgctttacca
      301 gatgcaggca atgatgaata ttgaagtgct aaatggttat gaagtgaaaa atataatcac
      361 atgtgaccct catgatttca acactcttaa aaatgaatat cctgattttg gaggaaaata
      421 taatgttatt cattatactc aatttatgca gcagcaaatt tcaagcggca acttaaaaat
      481 agatagtgat atgtttgctg gaaaaaagat cacattccac gacccatgtt atcttggtag
      541 atgcaacaat gaatatgatg caccgagatc tgtactcgga ctccttcctg cagttaatgt
      601 tgaaatggaa cgtactaaaa gttttgcatt gtgttgtgga gccggtggag gacaaatgtt
      661 taaagaagct gaaaacggca acaaagaagt ttttattgag agaactgaag aagcacttga
      721 aacaggctgc gatattattg ctacagcatg tcctttctgc atggtaatga tgaccgacgg
      781 cctaaaatat aaaaacaagg aagaagaaat taaaaacctt gatattgctg agttaattag
      841 tatgagttta agtttatagg ttaacatatt tgggtttagc ttgataaaaa ttgtaatata
      901 tatatgagca tctccaactt cgaactgctt gatttacttt tgattttgag tggcatagca
      961 attttcgtgt tttttatcta tgctgcaata gtctcactta ttgagaaaga aaaaaaagca
     1021 gcttcaaatt ttatattaat tggacttatt gctccagtcc cttttctgct aacaggtttc
     1081 tatgtcttcc agtatcaacc tttagtttcg atagttttat tgtcatcgat atttatccta
     1141 ttgatgatct attttctgcc tattcgtttt acatcaaaag ttagggacat tagtccggag
     1201 ggaagaatag atgaaagaga tataatgttc tcacgaagaa aattagagga ggatactgaa
     1261 aacttcaaag attattatag taagaacccg gataaactaa aaatcgatag taagattaat
     1321 aggaatccgg gtctgctaaa accggcatct ggaaattatg atccatttat gggttcatca
     1381 gcagatgcaa gtttcgatac ggtggatcta cttagtccac atgttgatgg aaaaatttct
     1441 tcaagaaaaa ttagttcaaa tcctaatagc atcacaaagt atattaaaaa ctggagtaaa
     1501 aagcttgggg ctctggatgt tggaataact gaactgaaag aatatcataa gtatagtaat
     1561 cgagggaggg aaaataatta tggtgataaa gtagtacttg atcacaaatt tgcgattgct
     1621 tttactgttg aaatgaatca tatggcaata agatctggtc cttactatcc aaccgttatg
     1681 gaatcagctc agcaatatct ggctgctggg gcaattgctg ttcagttagc taaatttata
     1741 cgccagcttg gatttcctgc tagagcacat atcgatggta actatgaact tatctgtcct
     1801 cttgttgcaa aagatgccgg gcttggtgaa attggcagaa tgggaatatt gatgacacct
     1861 aaatatggac ccagagttag gcttgctgtt gtaaccactg atatccccct tattgttgat
     1921 agcagatctt ttgccccaga tgtaatagat ttttgtgata actgtaataa atgtgctgta
     1981 aactgtccgg caaatgcaat ttcatacagc aacagaaaga atataaatgg ggttacacga
     2041 tggcagataa atcaagaatc ttgttacgat ttctggacca agtgtggaac agattgcggc
     2101 agatgtttaa gcgattgtcc atattcacat ccaaataatt tactgcatag catcgtgagg
     2161 tttggaataa gaaactcaac tatatttagc aggattgcaa tggttcttga tgatattatt
     2221 tatggcaaaa aacctgccat tcaatcacca cctgattgga tgaaagtgaa ttgatttatt
     2281 tttatatgat aataaaacct gaagcgatgg cagcatttag tgtggtgcaa catctttttt
     2341 gcaacaagca ggaagggcat catatgcctt ttgttccgct tgtaactcat ccgcatcata
     2401 cccaacttta gtaacagctt ttttaaggtt ttccttagtg gtttttccct ttttgaattt
     2461 gattgttaac actttagtct tattatcaag ttcaacaaac ctaacgcctt tttcaaaagc
     2521 taagtcgtgc tccaactttt ctttacacat tccacaaacg gcagatgttt ggatttcaac
     2581 agtctcaagt ttcttttcgt ttttaggttt tttatcctgt gcctgcaatc caattattga
     2641 aagtgtaatt ataattgtgg ttagaaataa ttttgttttc atattattat gttttattta
     2701 ggttctaatt taaatctaaa accagcaaat attttaatcc cagtaatagg tccccatact
     2761 attgaagagt caaaatactc actgaaagga tcattggctg caattattgg gttcatttga
     2821 cgaaagttgc ctaaattttc gccaccaata tatacttcaa atttattaaa gtatctagtg
     2881 atttgagcgt tgaccaatgt ataatcgggc gaatacgccg gctgttgata ctcctctgga
     2941 taaaaacccg tatatggtaa tcgttgatta ccaatagctt gaatattaat atcaaattgc
     3001 catgttttta gcgaagtttg atatgaaaga gcaagcaatc ctttaaactt actgactaaa
     3061 ggtttctctt gtagcttttc actaatcgtt gttttgacat cgttgtaccg gaaagccagt
     3121 tttatattaa aatttttaaa aagttcgtag tcggattcaa tttgaaaact atttgaaaac
     3181 gatcgcccgt taaggttatc tacatagata aaattcggtt tcttttctct gtctataatt
     3241 atctggtttt caaattgtgt acggaaataa tcagtggtta tgataagttc tctcgccatc
     3301 acattaatgt aaattgtata gctaagtcca aaattccacg atgattcaat ttttaactct
     3361 tccgtaagaa ctaacttttt tgatgtggca agcaaagaag tattttcagc aataacattt
     3421 ggtgtccgat atccctttcc tgcgcttagt cggagtacat tctgttcatt cagattaatt
     3481 cttgcatgaa tgcgaggtgt aaatagtacc ccgtataaat tatgattatc aacccttatg
     3541 ccggcaataa tgtttagatt tttattgttc gaaaaagtgt actgtataaa tgaaccaggc
     3601 actttttctg ttctgataaa ggtgctgtcg ttcaagtcct cattatattt atcaaactta
     3661 taactaagtc ctgttgtaaa ctgatgtctt tgatttacga tccatgattg aaacatcagg
     3721 ttgccataat aagataattg ttttgcatcg taagtggtta aaccaaaata tgaattttgg
     3781 tggtggacaa ctaactgatt ttgaaaccca aaatttgttg atgctctatg tttaaaaatg
     3841 taagccattt taagaaaacc ttcataacga ttagttctaa cgccaatacc ataaccattt
     3901 tcaatattgt gatctttatc aggatcgaat ttaacttgac ctccctgcct attttctgtt
     3961 agatatttaa tcccgaaatt tgtgcgaaat tgcttattat aatatctcca cctgttaaat
     4021 aagtttattt gtttaacaag aggttgatca agaaaagagt catcattaag gtcatgtttt
     4081 acagtcatac tttcgccatg aacgaaaata gctgtactta atttatcgtt tatttggaag
     4141 cgtgaaacta tatttccttc atttttccct ttttggtttc cataaccatt cagaaataac
     4201 ttctcgccct cgtccggctt tttatattca atattaattt gcccggtcat cgatgagtaa
     4261 ccatttatga cagaagaggt tccttttgaa acttgaatag atttcatcca gctaccggga
     4321 atataactca atccccaggg tgtggctaaa ccttccatat ttggtacatt ttcggttaac
     4381 aattgtgtat aaattcctgc caaccctaac atttgtattt gcttagcccc ggtaaccgca
     4441 tcgctataac taacatcaat tgttgcacta ttttcaaaac tctccgacag attacaacaa
     4501 gctgcttttt gtaattcgtt ttcatttaga tttacaattg ccataacttg atttctttca
     4561 agaaagctgc ctttttgcct tgcttttatt tctatctcat taaggtcctt tgtctcattt
     4621 aaaactacat gaatattatc aaatcctaca cgttctaaaa atattgtatc gttttgataa
     4681 cttacaaagc taacaactaa cacttttgga aatgcagatt caaggtcaat ttgaaaaaat
     4741 ccattagcat ctgttataac accgttttga gtgtttagct gaacaattgt tgctccaatt
     4801 agtggaatct ctttatcgtt tataacttca aaaacttgtc cattagcttg ttgcgcaaaa
     4861 agatttaatc cctgcatggt tattatcagt gctattaaga ggcatttttt cattctaaac
     4921 aataattcta taaaagcatt tataatatga atatttaata ttacatgtta tattcatacc
     4981 aaaaaagtcc gtatgcatga aataactaga ctgtgttagt agaataaata tttagagcaa
     5041 aaatacaaca gtagatgata agttatcaaa agatagtatt atcatttcaa cttattttca
     5101 caaactttaa agattatttc tcataaatct catcaagtac ttttgaatac tcctttatta
     5161 caactttgcg tttaagcttt tgggtaggtg ataacattcc attgtcggct gtccacagat
     5221 cagcaataag cctgaagact tttatttgag ccacatgatc gaattcaatg ttgtatttat
     5281 caacttctgt ctgataacgg tctattattt tttgcttctt aatcaaatcg tgattatctt
     5341 gaaacgttac atcgtgtaga gaacaccagt tgtgtaaata ctcgtaatta ggaatgatta
     5401 gtgctgcagt aaatttttca ttttcaccca caaccattat ctgttcaata aattgagatt
     5461 ccttaaaatg gttttcaact ggttgtggtg caacatattt acctcccgac agtttgaaaa
     5521 tttctttttt acgatcggtg atagttaaca tcttattttc atcaagcgtt ccaatgtcgc
     5581 cagtatgaaa ccatccatct ttatcaatgg cttcttttgt cttgtcaggg tctttataat
     5641 aacctttcat caggttcgga cctctttcaa gaatctctcc atcttcggcg atcattactt
     5701 caagtacatc tggcacaata cctacactgc caaacctaac accgggataa gagggtctat
     5761 ttgcagaaat aagaggagat gtttcagtta atccataacc ttcctgaaca ataatttgtg
     5821 cagcccaaaa aattctagcg aggcgaggtt gcagtgcagc acctccacaa ataactcctt
     5881 tcagttcacc gcccaaggca tcgcgccatt tactgaaaat aagcttatta gcaatagcga
     5941 gtttcctatt ataaacagca cttcgttttg caggatttgg atcaaattta tcaccaattt
     6001 taactgccca aaagaacaaa gcctttttta tgccgctaag ttgccttcct ttattaatta
     6061 ttttatcata tactttctca aaaacccttg gaacagtaat aaatgcattc acttttattt
     6121 ccctcatatt atctccaatg gtttctatat tttcggcata gtaaataata agtccttgcg
     6181 attgccacaa ataattacca acacgctcta gtacatgtga caagggcaga aaacttagag
     6241 ctctatcatt aggaccaaca taggtaacat actgatgtgc taaaagaaaa ttacttacaa
     6301 cattattatg agtaagcatt actcctttcg aaagtcccgt tgttccagaa g
//
LOCUS       DASCQP010000086         3880 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000380348, whole genome shotgun sequence.
ACCESSION   DASCQP010000086 DASCQP010000000
VERSION     DASCQP010000086.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3880)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3880)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3880
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000380348"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..2210
                     /locus_tag="QF480_01480"
     CDS             <1..2210
                     /locus_tag="QF480_01480"
                     /inference="COORDINATES: protein motif:HMM:NF024491.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phospholipase D-like domain-containing protein"
                     /protein_id="HJN05263.1"
                     /translation="PDPILLTPIQLSEPYEAQLVKINDVIFNDGGQDFTGNNLYTFTA
                     NGETGYIYVKNGQDLVGTIIPSTPIELTAICSQFDFSNPNEGYQVLPRDLNDIFIPSS
                     IYFIDALSNTNFTHNTLDFEWITNIDGTTEMYYGPTEESVTSNLISLPGTPSAHHIGI
                     TGLNAGEITWVQAFSISGSDTAKSAIVPFATISNSSGDMKAYFNSPVDVSYSTGVDAI
                     YLPETMDDTLISYINRAKYTIDFTIYNFNNSGISNISDALKAAANRGVRVRVIGCGTT
                     ANLGIDELIGSAVNVLIGPDDSQRTGIMHNKFIVFDAQSEDPDEPLVWTGSTNFTNGQ
                     INLDANNVIIVQDQSLARSYQIEFEEMWGSHGEEPNAANARFGSTKRNNTPHEFIIDG
                     KRVECYFSPTGGVNGKIVQVINSSDNDLSIATMLITRIVIADDIVDRKSAGVAVNMIT
                     NAEGNNNSTVNEMLEASLTTHYTFDDVSPGIMHHKYMIIDQGAPSSDPMIFTGSHNWS
                     AAADNDNDENTLIIHDATMANIYYQQFVKRFVDNHGVLDELTDPPSAVNDNAETMINQ
                     LVTVEVLNNDAFIAPVSLSIETHATNGVSFIPYASPNVIRYQPSEGFYGTDSVTYKIA
                     YQAEPTLFATAKVYFTVIDNSTVDDLFVVGKINIYPNPADNQINISFSTMKNTNLDLT
                     LADISGRIILQERYFTTLGVNKHQINLDGISDGIYLLNITENSNSFRYKVVVK"
     gene            complement(2338..>3880)
                     /locus_tag="QF480_01485"
     CDS             complement(2338..>3880)
                     /locus_tag="QF480_01485"
                     /inference="COORDINATES: protein motif:HMM:NF021942.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008239 - dipeptidyl-peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0070009 - serine-type aminopeptidase
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="S46 family peptidase"
                     /protein_id="HJN05264.1"
                     /translation="SEENIPLVPKHFLPISLDPVKMDDFAMIWGFPGGTERNLTSSGI
                     DFKVENFYPPIIEVFGKKLEVWKEHMSKDQEVRIKYASDYASIANMWKYFIGQNKGIK
                     DLDVGGSKKAYEKEFMAWVEQDSERKEKYGEVLSIIDNANTEKANGYSTLIYASISGV
                     SGADIIGYASDFSALQSFMEQYKEEKDKKKKEKKQKQIDNEIEKLKNNVSEQFKNYDM
                     ATDEDVFAAMMDMYYNNIPEAMQPELLNKLVSKYKGDFKQIAEYVYSKSNFSSAEKVM
                     AFLDNPSLKALDKDPAFKLSSEFMASLMEASSNIKRGGDELRVANTLLIEGKREMQPN
                     KSFYPDANSTLRFSYGKVMDYYPADAIHFDYITHLSGVIEKEDPDNDEFIVHEKLIEL
                     YEAKDYGQYGQDGKMIVCFLTNNDMTGGNSGSPVVNGKGELLGLAFDGNWEAMSSDIA
                     FAPNLQRTIVVDIHYVLFIIDKFAGAKNIIDELTIVKTSPPSPAPQPIEPPVPVAVEV
                     EVTTN"
BASE COUNT         1209 a          710 c          675 g         1286 t
ORIGIN      
        1 tgccggatcc aattttattg acaccaatac aactttcaga accttatgaa gctcagttgg
       61 ttaaaattaa cgatgtcatt tttaatgatg gtggacaaga ttttacagga aataatttat
      121 acacatttac tgctaacggt gaaacgggct atatttatgt taaaaacgga caggatcttg
      181 ttggaacgat tataccgagt acaccgattg aattaacagc catctgctct caatttgatt
      241 ttagcaatcc caacgaaggc tatcaggtat tgccccgcga tttgaatgac atattcatac
      301 caagttctat ctattttatt gatgctttat caaatactaa ttttacacac aacacgcttg
      361 attttgaatg gattacaaat attgatggaa caacggaaat gtattatggt ccaacagaag
      421 aatccgtaac atccaacctt atttctttac ctggcactcc aagtgctcat catattggca
      481 taacaggttt aaatgctggt gaaattacat gggtacaggc tttttcgatt agtggttctg
      541 atactgctaa atcggcaata gttcccttcg ccactatttc aaattcatca ggcgatatga
      601 aagcatattt taatagccct gttgatgttt cttattctac cggagttgat gcaatatatc
      661 ttccagaaac catggacgac actttgataa gttatattaa tcgtgcaaag tacaccatcg
      721 attttactat ttacaatttt aataatagcg gtatcagtaa cattagtgat gcattaaaag
      781 ctgctgctaa taggggtgtt cgtgttcggg tgattggttg tggaactacc gcaaatttag
      841 ggattgacga gctaattggc tcagctgtta atgtacttat tggtccggat gattctcaac
      901 gcactggtat tatgcataat aaatttattg tttttgatgc acaatcagaa gatcctgacg
      961 aaccacttgt atggactggc tcaaccaact tcaccaacgg tcaaattaat cttgacgcta
     1021 acaatgtaat cattgtacag gatcaaagtt tggcacgttc ataccaaatt gaatttgagg
     1081 aaatgtgggg ttctcatggt gaggaaccca atgctgcaaa tgctcgcttt ggatcgacaa
     1141 aaagaaacaa tacaccacac gaattcatta tagatggcaa acgtgttgaa tgttacttta
     1201 gtccgactgg tggcgtaaat ggcaagattg tgcaagtaat caattcttca gataacgatt
     1261 taagcattgc aactatgctc ataacacgaa ttgtaattgc agatgacata gttgaccgca
     1321 agtcagcagg tgttgcagta aatatgataa cgaatgctga aggaaataac aactcaaccg
     1381 taaatgagat gctagaagct tctttgacaa cacattatac atttgatgat gtttcaccgg
     1441 ggataatgca tcataaatat atgattatag atcaaggtgc accttcttcc gatcctatga
     1501 tttttacagg ttctcacaat tggagtgctg ccgcagataa tgataatgat gaaaatacgt
     1561 tgattatcca tgatgcaaca atggctaata tttattacca gcaatttgtt aagcgttttg
     1621 ttgataatca tggagttctg gacgaactaa cggatcctcc atcagctgtt aacgacaatg
     1681 ctgaaaccat gattaaccaa ttggttacag ttgaggtgtt gaataatgac gcgtttattg
     1741 ctcctgtttc attaagtatt gaaacacatg ccacaaatgg agtctctttt atcccttacg
     1801 ccagtccgaa tgtaattagg tatcaaccaa gtgaaggatt ctatggtaca gattctgtta
     1861 catacaagat tgcataccag gcagaaccaa cactttttgc gactgcaaaa gtatatttca
     1921 cggtaattga taatagtact gttgatgatt tatttgtagt tggtaaaatc aacatatatc
     1981 ctaatcctgc agataatcaa ataaacatat cttttagtac aatgaaaaat actaatcttg
     2041 atttaacact tgcagatata tcaggtagaa taatattgca agaaagatat tttacaacgc
     2101 tgggagttaa taaacatcag attaatctgg atggtatttc ggatggtatt tacttattaa
     2161 atatcacaga aaattctaat agttttagat ataaggtggt tgtgaaataa ttaatattac
     2221 aagaataaaa aacgggatta gttggattaa ctgatcccgt tttttatttc agatggctct
     2281 ataattctat ttcaagcatt catacttgaa tggctcagca ttctagaaaa tataaactta
     2341 attcgtagtc acttcaactt ctactgctac cggaaccggg ggttcaatag gttgtggagc
     2401 tggcgaagga ggagaagttt taacaattgt aagctcatca ataatgtttt tagcaccggc
     2461 gaatttatca ataatgaaaa gtacgtaatg tatatcaaca acaattgttc tctgcaagtt
     2521 tggggcaaaa gcaatatcgc tgctcatagc ttcccaattg ccatcaaatg caagacctaa
     2581 tagctcacct ttaccattca caaccggcga acctgaattt ccgcccgtca tatcgttatt
     2641 agttaaaaag catacgatca tcttaccatc ttgtccatat tgtccgtaat cttttgcttc
     2701 gtacaattca attagttttt catgaacaat aaattcgtcg ttgtcaggat cttctttttc
     2761 aattacaccg ctaaggtgtg ttatatagtc aaaatgaata gcatcagcgg gataataatc
     2821 cattactttt ccatatgaaa acctaagggt tgaatttgca tcagggtaga aacttttgtt
     2881 aggttgcatt tctcgtttac cttcaattaa aagagtattg gcaactctca actcgtctcc
     2941 gcctcttttt atatttgatg aagcttccat aagtgaagcc ataaattcgg acgatagttt
     3001 gaaagcggga tctttatcaa gggcttttag tgaaggatta tcaaggaatg ccataacttt
     3061 ttctgcactt gaaaagttcg atttagagta tacatattct gcaatttgtt taaaatctcc
     3121 cttatactta cttacaagtt tgttaagcaa ttcaggttgc atagcttcag gaatattatt
     3181 gtaatacata tccatcatag cagcgaaaac atcttcgtca gttgccatgt cgtaattttt
     3241 aaattgctca gaaacattgt ttttgagttt ttcaatttca ttatcgattt gcttttgttt
     3301 tttctctttt ttcttcttgt ccttttcctc tttatattgt tccataaatg actggagagc
     3361 tgaaaaatcg cttgcatacc caattatatc agcgccacta accccactta tactcgcata
     3421 aataagggta gaatatccat ttgctttttc cgtattagca ttatcgataa tagataatac
     3481 ctcaccatat ttttcttttc tttcagaatc ttgttcaacc catgccataa attctttttc
     3541 atatgctttt ttagaaccac caacatcaag atctttaata cctttgtttt gtccgataaa
     3601 atatttccac atattagcaa tactggcata atcggatgca tatttaatcc taacttcctg
     3661 atccttactc atgtgttctt tccatacttc cagttttttg ccaaaaactt caataatagg
     3721 agggtagaag ttttcaacct taaaatcaat accggatgac gttaggttcc gctcggtacc
     3781 tccaggaaat ccccatatca ttgcaaaatc atccatctta acagggtcga gagatatagg
     3841 caggaagtgt tttggtacaa gcggtatatt ttcttcactg
//
LOCUS       DASCQP010000087         6375 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000386552, whole genome shotgun sequence.
ACCESSION   DASCQP010000087 DASCQP010000000
VERSION     DASCQP010000087.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 6375)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6375)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6375
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000386552"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..594)
                     /locus_tag="QF480_01490"
     CDS             complement(<1..594)
                     /locus_tag="QF480_01490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006798561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homocysteine S-methyltransferase family protein"
                     /protein_id="HJN05265.1"
                     /translation="MKSEIEKELKQRILVLDGAMGTMIQRFGLVEEDYRGEKFKNIHS
                     LQKGNNELLNLTQPKIITDIHEEFLSAGADIIGTNTFNGTRISQGDYGLEELVYDINF
                     KSAKIAKQAADKFTNLTPGKPRYVAGAMGPTNKTASMSPKVDDPGFRNVTFDELRDNY
                     FEQASALIDGGIDILLVETIFDTLNAKAALFGINKLME"
     regulatory      complement(680..793)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00162"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="SAM riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00162"
     gene            925..1800
                     /locus_tag="QF480_01495"
     CDS             925..1800
                     /locus_tag="QF480_01495"
                     /inference="COORDINATES: protein motif:HMM:NF012376.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HJN05266.1"
                     /translation="MKKLVFVISFAAIISASIFVSQSCKKYNSNPPVAVHDLTFKLPG
                     LEYKHNTYYSIEDNAGHIDFVFNKEIDVNSVAGNITFSDMSGVLNDSIFIEVAGQKMY
                     VRFDSDFHLNSGWRYLLKISQGFKSTQDDDFPKDTIIEFRTKSKHLSDLILEGKTTSQ
                     RKLIACISDLHMGQQKAIDSGYCWFSDNKVAMEQFLDMIIEKPLFKELVIMGDLFDEW
                     IIPYSISPFDSAYGVTNTREYFESIANAEDNTLIIDKLKTIALNPDILLAYIPGNHDM
                     QLTEEIFTSIIPGSQ"
     gene            1879..2589
                     /locus_tag="QF480_01500"
     CDS             1879..2589
                     /locus_tag="QF480_01500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05267.1"
                     /translation="MNCPEPFVNDGHILPPGFFISRLYAQGYMTQGPPNKSSSQTKTS
                     IEFDLAWDIALYELDNKYFSMKTDLSADIILMGGIDNYTETFSYNGVKKMFGKNIEDS
                     WDSTQVQNQVPVNLSVSEALEASISLHDLYTVAAKEYMEESSPIQYKIVAFGHTHQAT
                     LEVYPKGSNFNSIYGNSGTWINDACTGAYPSRTFLIIYPGDWSTSELDIVTYYQFNFN
                     STQGKYVPIRIKEENILN"
     gene            2753..>6375
                     /locus_tag="QF480_01505"
     CDS             2753..>6375
                     /locus_tag="QF480_01505"
                     /inference="COORDINATES: protein motif:HMM:NF019323.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004866 - endopeptidase inhibitor activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MG2 domain-containing protein"
                     /protein_id="HJN05268.1"
                     /translation="MSIFKDITTYLLLITTILIISSFQITTDDESHYEKWRKVDSLTK
                     SGQPKSAIKIIDHIYKTSKENDNTPQIIKSLIYRISLQSSYEEDHLLKSIAVFENELS
                     NAAVPEKQILQSLIAELYFAYYNANRWKINKRQALSEDDNEDINTWDAIRINKIIKKY
                     YKASLEDETILAEIDLDKYEIILLQGDSSNFTLWPSLFDMLANRALQYFISTDAEFTQ
                     IVSTFKTSYNGYFQLSAEFVSLYINPNESSQTEVLILFQRLLALQIKQNNTEALVDLD
                     LKRLKYVYENSLQDENSEATYLRSLTLLADKYIKHSVYASIAFQLANQYFITGKSYVP
                     GFNENNRYDLVKADSICKVAISEFPNVNGSNNCRNLVEIINQISFGFDIPVAEMPDKP
                     ILSLVQFKNINKLYFKIVIGDPKADANKNNRKKQILKELEQKALMSWEQKLPITKDHR
                     MHRVEVQIPELTPGYYVIFASNDSLFRTTENIKFKPIWITNISYITSANKSGGYTDMY
                     TLNRETGISIGKVNITIYKRQYDNRSRTYAVKEASKLTSDKNGYAKIESITGNNFGTY
                     LFMFEKDGNQLFSENYINFYRPKENSKPKIKTYLFTDRAVYRPGQTIYFKGIVIEELG
                     NDVKLLTDYTTDLKFINASRKNIQTTSFTTNNNGSFNGEFIIPTGGLNGQMTIKSKTG
                     RVSFIVENYKLPTFEVNFDSIVSQIKLNETITITGKAMSYSGSSVDGAAVRYRVTRKA
                     VFPRPYFRDKHLYPINLGREVEITHGDLITSSNGTFELQFDAIPDYRIPRKAEPVFTY
                     KINVEVTDITNEVQTAQTTVNIGQKAVVLTFDLPEVVDRDNIQNPGIEAANLNGSLIS
                     FDVSLSLYKLTPPSRLLNKRQWAHPDFYIIPETEFKKNFPHAIYKNEDDRSMWKKEKI
                     SHQQITIKGKSQFPENYLNELAPGEYMIVASGEDNDGETVENTHFFTLFSSLGKKLPG
                     NMIYWSALSSKEAEPGETIKLVVGSAARKSRILYEIVNDNNIVERKWINLNRGQKTIS
                     IPVTEAYRGNFSVNLTMVRFNSLYSNNLKVIVPYSNKKLDIKLSTFRNHLIPGINEEW
                     SVTISGNKGQKFAAELLAGMYDASLDIFRPNSWQMKLYYDKRQSSKWESNQFVSSLSS
                     TLVAKKLKYFKVHRIEYPAVNWFGYQFIGNRYGIQSTMDGVFLETSAVRKSVNQDTFG
                     EVDG"
BASE COUNT         2224 a         1037 c         1117 g         1997 t
ORIGIN      
        1 ttccattagc ttgtttatgc cgaacaaagc tgctttagca ttaagtgtat caaagatcgt
       61 ttcaaccaaa agtatatcta tacctccgtc aatcagggct gatgcttgtt caaaataatt
      121 atctctaagc tcatcaaatg taacatttcg aaaaccaggg tcatcaactt taggggacat
      181 ggacgcagtt ttatttgttg ggcccatggc tccggccaca tatcttggtt tacctggagt
      241 aaggtttgta aacttatcag cagcttgttt ggctatttta gccgacttga agttaatatc
      301 ataaaccaat tcctccaaac cgtaatcgcc ttgcgatatt cgagttccat taaaagtatt
      361 tgttccgata atatctgcac cagcacttaa aaattcctca tgaatatcag taataatttt
      421 aggttgggta agatttaata gttcgttatt acctttttgg agggaatgaa tatttttaaa
      481 tttctctcca cgataatcct cttcaactaa tccaaatcgc tggatcatag tacccattgc
      541 accatccagc acaagaattc tttgctttag ttctttttct atttcagact tcataattat
      601 gtagcattaa ttgtacatgt tgaatgtcaa aaaaaaatac aggtatttaa aataatgaat
      661 ctaattgaca ttgcacttta atttatcatt tcccccgcta tagcggaagt taggtattgg
      721 caccttttcc acctcatgcg gaaggttgcc agggtttcat agagcctaat ctctccaccc
      781 ttctttataa atcaagaagc ctcaggtatg ctttaacaat gcagttataa cagtgagagg
      841 aactgaatta cttggcaaat atagaataaa attgtatatt tgacatgtac agccttctca
      901 attttattca aaatctcatt tattatgaaa aaattagtat ttgtaatttc gtttgcagca
      961 attatttcag ccagtatttt cgtttcacaa tcgtgtaaaa agtataattc gaatcctccg
     1021 gttgcagttc atgatttaac ttttaaatta ccaggtctcg agtacaagca taacacttat
     1081 tatagtattg aggataatgc gggtcatatt gattttgtat ttaataaaga aattgatgtt
     1141 aattccgttg ctggaaacat tacattctct gatatgtcag gagtacttaa tgattctatt
     1201 tttattgaag tggcgggaca aaaaatgtac gttcggtttg attctgattt tcatctaaat
     1261 tctggatgga ggtatttgct taagatatct caagggttta aatcaacaca ggatgatgat
     1321 tttccgaaag atactattat tgaattcagg acaaaatcaa aacatctatc tgatttgatt
     1381 ttagaaggga aaactacatc gcaacgaaaa ttaatagcat gtataagcga cttgcatatg
     1441 ggtcagcaaa aagctattga cagcggttat tgttggttta gtgataataa agtggcgatg
     1501 gaacagtttc tggatatgat tatcgaaaaa cctttgttta aggagcttgt aattatgggt
     1561 gatctatttg atgaatggat tattccatat tcaatttcgc cttttgattc agcatatgga
     1621 gttacaaata cacgtgaata ttttgagtcg attgctaatg ctgaagacaa tactttaatt
     1681 attgataagc tgaaaacaat tgctttaaat cctgacatac tattagcata tataccggga
     1741 aatcatgata tgcaactaac tgaagaaata tttacatcaa ttataccagg aagccagtag
     1801 aagggtgatg ttgttggact tggtaaatat tccccaacag atgagataat actagagcat
     1861 ggccataggt atgattttat gaattgcccg gaacctttcg ttaatgacgg tcatattctt
     1921 cctcctggtt tttttatcag ccgcctatat gcacaaggtt atatgacaca gggaccacct
     1981 aataaaagta gttcacaaac aaaaacaagt atagaatttg atctagcctg ggatattgca
     2041 ctatatgaat tagataacaa atatttttcg atgaaaactg atttaagtgc agacatcatc
     2101 cttatgggtg gcattgataa ttatacagaa actttttcat ataacggcgt aaaaaaaatg
     2161 tttggtaaaa acattgagga tagttgggat agcacacaag tacaaaatca agtaccagtg
     2221 aatttgtctg tttctgaggc tcttgaagca tcaattagtt tacatgacct ttatactgtt
     2281 gcggcgaaag agtatatgga agaaagtagc cctatccagt ataaaatagt agcttttgga
     2341 catacccatc aagcaaccct cgaagtttat cctaaaggat ccaattttaa ttcgatttat
     2401 ggaaactcag gtacatggat taatgatgcc tgtactggcg cttatccatc aagaacattt
     2461 ttgataatat atcccggaga ttggtcaact tctgaactcg atattgttac ctactaccaa
     2521 ttcaatttta atagtacaca aggtaaatat gtacccatac gaattaagga ggagaatata
     2581 cttaattagt agtagttggt tcaatcattg ttatttggat attgaaaaat tgaccttata
     2641 gagattcaaa attcctgata aatttcaggt gagctaatga ttttattgca ccccccgaat
     2701 atggcattat atttgcaaat tcagcatcta gatataaaca aatgaatctc aaatgagcat
     2761 atttaaagat ataacaacct atttgttatt aattactact attcttatca tcagtagttt
     2821 tcaaataaca actgacgatg aaagtcatta tgagaaatgg cgaaaagtag attctcttac
     2881 taaaagtggg caacccaaat cggctataaa gattattgac cacatatata aaacttctaa
     2941 agagaatgat aatacacctc agataattaa atctttaatt taccgcataa gcctacaaag
     3001 cagctatgaa gaagaccatt tgctaaaatc gatcgctgtt tttgaaaatg aactttcaaa
     3061 tgcagcggtt cctgaaaaac agattttgca atcgctgatc gccgaacttt atttcgccta
     3121 ttacaacgca aacagatgga aaataaataa acgtcaagct ttatcagagg acgataatga
     3181 ggatataaac acctgggacg caattaggat aaataaaata attaaaaaat attataaagc
     3241 atctcttgaa gatgaaacca ttcttgcaga aattgatctt gataaatacg aaattatact
     3301 tctgcaggga gattcttcaa atttcacttt gtggccttca ctatttgaca tgcttgccaa
     3361 ccgagcatta cagtacttta tatctactga tgcagagttt acacagattg tctccacatt
     3421 caaaacaagt tataatggtt attttcaact ttcggcagaa tttgtctctc tgtatataaa
     3481 ccctaatgaa tcatcacaaa cagaagtatt aattctattt caaagattat tagccttaca
     3541 gataaagcaa aacaatactg aagcactagt tgatcttgat ttaaaacgac ttaaatacgt
     3601 gtatgagaac tctctacagg acgaaaatag tgaggctact tatctgaggt cattgacgtt
     3661 gctagcagat aaatatatta aacactccgt atatgcttcg atcgcgtttc aacttgcaaa
     3721 tcaatacttt atcacaggca aaagttatgt tccagggttt aatgaaaata acagatatga
     3781 tttggtaaaa gctgacagca tttgtaaggt tgcgatcagc gaatttccta acgtaaacgg
     3841 atcaaacaat tgccgcaact tggttgaaat aattaaccag attagctttg gatttgatat
     3901 acctgtcgca gaaatgccag ataaaccaat attgtcacta gttcagttta aaaatattaa
     3961 caagctttat tttaaaattg taataggtga tccgaaagca gatgcaaata agaacaatcg
     4021 aaaaaagcag attcttaagg aattagaaca gaaggcgtta atgtcatggg aacaaaagct
     4081 tccaataact aaggatcaca ggatgcatag agttgaggtt caaattccag aacttacgcc
     4141 cggatactac gtaatatttg cgtctaacga ctcgttattt cgcacaactg aaaatataaa
     4201 gtttaaacct atttggataa ccaacataag ttatataaca agtgctaata aatcaggtgg
     4261 ttataccgat atgtatactt tgaatcgtga aacgggtatt agtataggaa aagtgaacat
     4321 cactatttat aagcgtcaat atgataatcg tagtagaacc tatgcagtta aagaagcaag
     4381 taaacttact tccgataaaa atggctatgc aaaaattgag tcaattacag gaaacaattt
     4441 cggaacatat ttgtttatgt ttgaaaaaga cgggaatcaa cttttctctg aaaactacat
     4501 caatttttat cggccaaaag aaaattcaaa gcctaaaatt aagacttatt tgtttaccga
     4561 cagggctgtt taccgtccgg ggcaaacgat ttattttaaa ggaattgtaa tagaagaatt
     4621 agggaacgat gtaaaacttt taacagatta tactaccgat ctaaagttta ttaatgcaag
     4681 tagaaaaaat atacaaacta ctagttttac cactaacaat aatggttcgt ttaacggaga
     4741 atttatcata cctacaggtg ggcttaatgg tcaaatgaca attaaaagta aaacaggaag
     4801 ggtttcattt attgttgaaa attataaact gccaactttt gaagtgaatt ttgacagcat
     4861 tgtaagtcaa attaagctaa acgaaacaat tacaataaca ggtaaagcga tgagttattc
     4921 cggtagttca gttgatgggg cagctgtacg ttatagagtt acgcgtaaag ccgttttccc
     4981 cagaccatat ttcagggata agcatttata cccaattaat ttaggccggg aagttgaaat
     5041 tacgcatggc gatcttataa cttcctcaaa tggtactttt gaactacaat ttgatgctat
     5101 tccagattat cgtatcccaa gaaaagcaga acctgttttt acatataaaa ttaacgttga
     5161 ggtaaccgat attacaaacg aagtccaaac tgcacaaaca actgttaata ttggtcaaaa
     5221 agcagtagta cttacatttg atcttcctga agttgttgat cgagataata ttcagaatcc
     5281 tggaatagaa gctgcaaatt taaatggatc attaatttca tttgatgtat cactctccct
     5341 ctataaactt actcctcctt cacgattatt gaataaaaga caatgggcac atccagattt
     5401 ttatataatt cctgaaacag aatttaagaa gaacttccca catgctatct ataaaaatga
     5461 agatgatcgt agtatgtgga agaaagagaa aatatcccat caacaaatta ctataaaagg
     5521 aaagtcacag tttcccgaaa actacctaaa cgaattagca ccaggagaat atatgattgt
     5581 tgcaagtggt gaagacaatg atggtgaaac ggttgagaat actcatttct ttactttgtt
     5641 ttcttcttta ggaaaaaagc tacctggaaa tatgatttat tggtcagccc tttcatcaaa
     5701 agaagcagaa ccaggagaaa ctataaagct cgttgttggt tctgcagctc gaaaatcacg
     5761 aattttatat gaaattgtta acgacaacaa tattgttgaa agaaaatgga ttaatttaaa
     5821 taggggtcag aaaacaatta gtattccggt tactgaagca tatcggggaa atttttctgt
     5881 taatctaact atggtacgat tcaacagttt atattctaac aatctcaagg ttatcgtacc
     5941 ttattcgaat aaaaaactgg atataaaact tagcacgttc cgcaatcatc taatcccggg
     6001 aattaatgaa gaatggagtg ttacaatcag tggcaataaa ggacaaaagt ttgctgctga
     6061 attgttagca gggatgtatg atgcatcact agatattttt aggccaaata gctggcaaat
     6121 gaaactatat tatgataaaa ggcagtcatc aaaatgggaa tcaaatcagt ttgtcagttc
     6181 gttatcgtca acattagttg ctaaaaagct aaaatatttt aaagttcatc gcattgaata
     6241 tccagcagtt aattggtttg gctatcaatt tataggaaac aggtatggta tacaaagcac
     6301 aatggatggt gtttttctag agacctcggc agttcgtaag tcggttaatc aggatacttt
     6361 tggtgaggtt gatgg
//
LOCUS       DASCQP010000088         2233 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000403328, whole genome shotgun sequence.
ACCESSION   DASCQP010000088 DASCQP010000000
VERSION     DASCQP010000088.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2233)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2233)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2233
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000403328"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(13..112)
                     /gene="ffs"
                     /locus_tag="QF480_01510"
     ncRNA           complement(13..112)
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="QF480_01510"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            199..720
                     /locus_tag="QF480_01515"
     CDS             199..720
                     /locus_tag="QF480_01515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05269.1"
                     /translation="MLQKPLTLLILMGAAIGLFIGILDSIFHFINFEQFRILNIIVFL
                     VFFISVYRSVIFYRDKMHQGIITYGCTFRNMLFIGIVAALIIAAIRFLFLEYVINIDI
                     NSILDNTRISINEQSSLYSDDQIQNRLSFIEFSYNPIVSSILYFGYYFLYVIVFTFFA
                     SFLIRRIDRNISL"
     gene            799..1344
                     /locus_tag="QF480_01520"
     CDS             799..1344
                     /locus_tag="QF480_01520"
                     /inference="COORDINATES: protein motif:HMM:NF025227.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4199 domain-containing protein"
                     /protein_id="HJN05270.1"
                     /translation="MNKSNAIFRVSLMNGLITGIIFCLITAFIYLLDINMFSSLVVPI
                     GIWILNLCIVIVAMILSIKKVRETVIDQSLNYGNRFLTGLIVGIIAAWVSGIFSYLLF
                     QVIDPEWMLLQIEGMADMLINMGLSEDDAYAQVDDAKEGLEPAKQFLSGFVYAPAFYI
                     VVSLIVSAFVKEKKAAEIETN"
     gene            1350..2233
                     /locus_tag="QF480_01525"
                     /pseudo
     CDS             1350..2233
                     /locus_tag="QF480_01525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005677545.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
BASE COUNT          708 a          323 c          405 g          797 t
ORIGIN      
        1 aataacacaa aaaaagggta agctactcac atcgcaccgc tacaaccacc tacccttgct
       61 accttccagt cctgggggaa ttcagtggga gctggtcgta tgagacttac ccgtggcaaa
      121 aataagtatt gtattgacac aaatagataa tttgaaaaat atatttagtt ttacataaat
      181 tttagatttc tggaaataat gcttcaaaaa cctttaacac tactaatctt aatgggtgcc
      241 gcaataggtt tgtttattgg catactcgat tccatttttc attttattaa ttttgaacag
      301 tttagaatat taaatataat agtattcctt gtgtttttta taagcgttta cagatcggta
      361 attttttatc gggataaaat gcatcaagga attattacgt atggctgtac atttagaaac
      421 atgttattta ttggcattgt tgctgccttg ataatagccg cgatcaggtt cttattttta
      481 gaatatgtta ttaatattga tataaactcg atacttgata atactagaat ttctataaat
      541 gaacaatcca gcttgtattc tgatgatcaa atccaaaata ggctatcttt tatcgaattc
      601 tcttataatc caatcgtttc atcaatactt tattttggat attatttttt gtacgtaatt
      661 gttttcacat tttttgcttc ttttttaatt aggaggatcg acagaaatat atcactttaa
      721 atttaaaaag tatttaatta ttctattata cttgacgcat tttattaatt ttgttgaaca
      781 ttttaaaacc tatgagttat gaataaaagt aatgcaattt ttcgggtctc gttgatgaat
      841 ggactaatca cgggaattat tttttgctta attacagcat ttatttacct gcttgacata
      901 aacatgttta gtagtctggt tgtcccaata ggcatatgga ttttaaattt gtgtattgtg
      961 atagttgcaa tgattttatc aattaaaaaa gtaagagaaa ctgttataga ccaaagcctt
     1021 aactatggca acaggttttt aaccggccta attgttggta ttattgcagc atgggtatcc
     1081 gggatatttt cgtacttatt atttcaggta attgatcctg aatggatgtt gctgcagatt
     1141 gaaggtatgg ctgacatgtt aattaacatg ggactatcag aagatgacgc atatgcgcaa
     1201 gttgatgatg ccaaagaagg tcttgaacca gctaaacaat ttttatctgg ttttgtatat
     1261 gcacctgcgt tttatattgt tgtttcgttg atagtttctg catttgtgaa agagaaaaaa
     1321 gcagctgaaa tagaaaccaa ctaattaata tggacatatc agtagttatt cctttatata
     1381 atgaagaagg atctcttatt gagttaaatg attggatact taaagtgatg agatccaatc
     1441 atttttcgtt tgaaattatc tatattgacg acggctcatc tgataattcg tggcagttta
     1501 tccagaattt ctcagaggag aatacttcaa taaagggtat tcgtttccgc aagaattacg
     1561 gtaaatcagc cgctttaaac gaagggttta aagttgcctg tggcgaagtc gtaattacta
     1621 tggattctga tttacaggac agccctgacg agatacccgg attgttcaag atgattactg
     1681 aagaaaatct cgacattgtt tcaggttgga agaagaaacg ctatgattct acgtttggaa
     1741 agaatgttcc atctaaaata tttaactgga catcaagacg gctctttagt tcaaaattac
     1801 atgatatgaa ttgtggatta aaagcctata aacttgaagt tgtaaaaaac attgatgtgt
     1861 atggtgaaat gcacagatat ataccaatta ttgctaggtc agcaggtttc tcaaaaatag
     1921 gtgagaaaat tgtagtgcat caaaaacgta aatacggaac aacaaaattt ggaattgaca
     1981 ggtttatgaa gggttatctc gatttactgt tgataaactt tgtatcacgt ttcgctcaaa
     2041 ggccaatgca tttctttggt tccatgggtt cgttgatttt ctttatttga tttgtaattg
     2101 cctcatatct cgcatatgca aaatttttca tggaaggcta caaaatgaca gaacgtccac
     2161 tattttattt tggacttctc gcaatggtaa taggtacaca attattttta acaggttttc
     2221 tggctgagat gat
//
LOCUS       DASCQP010000089         1535 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000408456, whole genome shotgun sequence.
ACCESSION   DASCQP010000089 DASCQP010000000
VERSION     DASCQP010000089.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1535)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1535)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1535
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000408456"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1535)
                     /locus_tag="QF480_01530"
     CDS             complement(<1..>1535)
                     /locus_tag="QF480_01530"
                     /inference="COORDINATES: protein motif:HMM:TIGR00225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HJN05271.1"
                     /translation="TLFILLTASIGYSQNHPNNIDADKTVKKFSTLLYLIDNFYVDTL
                     DVPALTETAIVQTLKELDPHSAYIPKKNVEKSNETLEGSFEGVGLTFQLFKDTILVVA
                     PIPGGPSDKVGIMAGDKIVTVDGEDAFGEDITNTWVMDHLRGKKGTHVVVGIYRRGNE
                     ALIEYEIIRDKIPINSLDAAFMLNSTTGYIKLNRFAKQSLTEFTEAANDLKEQGMQNL
                     VFDLRGNSGGYLGTAMSITDEFLPDDKLIVYTQGTHQARQELRATKKGEFENGKLVVL
                     INEGSASASEIVSGAIQDWDRGVIIGRRSFGKGLVQRPFKLPDGSIVRLTVARYYTPS
                     GRCIQKPYDDGVDEYYRDFVNRINNGETLHADSIHFPDSLKYKTKSGRTVYGGGGVMS
                     DIFIPLDTARYNTLYSSLIRKGVINGYVNEYLDNNRNLLKAKYPNLDAFINGFNISDI
                     EFSEFLANAKDKDIETTEEEIAPNAEFIKLQLVALIARNLFEPGDYFEVIAPLDHEIN
                     KAL"
BASE COUNT          457 a          318 c          249 g          511 t
ORIGIN      
        1 cgagtgcttt gtttatttca tgatcaagcg gggcaattac ttcaaaataa tcaccgggtt
       61 caaacaaatt ccgggcaata agagctacta attgaagctt aataaattca gcatttggtg
      121 caatttcttc ttcggtagtt tcaatgtcct tatccttggc atttgcaagg aattcagaaa
      181 actcaatatc actaatattg aatccgttaa taaaagcatc caggtttgga tattttgctt
      241 taagcaaatt acggttattg tcaagatatt cgtttacata accatttatt acgcccttcc
      301 tgattaatga tgaataaagc gtattatatc tggctgtgtc gagcggaata aaaatatccg
      361 acataacacc tcctccacca taaacagttc tccctgattt ggttttatat tttaacgaat
      421 caggaaaatg aatactatca gcatgcaaag tttcaccatt atttattctg tttacaaaat
      481 ccctataata ttcgtcaaca ccatcatcat aaggtttttg aatgcatctt ccggaaggtg
      541 tataatatcg ggcaacagtt aaccgtacaa ttgagccatc gggtaattta aatggtcttt
      601 gaaccaatcc tttaccaaac gatctgcgac caataattac tccacgatcc caatcctgta
      661 tagcgcctga tacgatctca cttgccgatg cagatccttc attaataaga accacaagtt
      721 ttccgttttc gaactcacct tttttggttg cccttaattc ttgtcttgcc tgatgtgttc
      781 cctgtgtgta gacaattaac ttatcatcag gaaggaactc atcagttatg ctcattgcag
      841 tacctaaata accacctgag ttaccacgga gatcaaatac caggttttgc atgccttgtt
      901 ctttaagatc atttgctgct tctgtaaatt cggtcagaga ctgttttgca aatcggttta
      961 atttaatata acccgtagta ctattaagca taaaagctgc atccaaacta ttaattggaa
     1021 tcttatcacg aataatttca tattctatca acgcctcatt tcccctacga tagataccta
     1081 caacaacatg tgttcccttt tttcccctca ggtggtccat tacccaagta tttgttatat
     1141 cctcaccgaa agcatcttcg ccatcaactg taactatttt gtctccggcc ataataccaa
     1201 ccttatctga gggacctccc ggaattggtg ccactacaag tattgtatct ttaaaaagct
     1261 ggaatgttaa tccaacacct tcaaaactcc cttcaagggt ttcattcgat ttttcaacat
     1321 tctttttagg gatataagct gaatgagggt caagctcttt gagtgtttgc actatagccg
     1381 tttctgttaa ggcaggaaca tcaagtgtat caacataaaa gttatcaatt agatatagta
     1441 gtgtagagaa tttctttaca gttttatctg catcgatatt gtttgggtga ttttggctat
     1501 atccaattga ggcagttaaa agtataaaaa gagtt
//
LOCUS       DASCQP010000090         2903 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000409411, whole genome shotgun sequence.
ACCESSION   DASCQP010000090 DASCQP010000000
VERSION     DASCQP010000090.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2903)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2903)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2903
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000409411"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            131..1210
                     /locus_tag="QF480_01535"
     CDS             131..1210
                     /locus_tag="QF480_01535"
                     /inference="COORDINATES: protein motif:HMM:NF014345.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="choloylglycine hydrolase family protein"
                     /protein_id="HJN05272.1"
                     /translation="MIKKLQLIIIISALLLPFNSSRACTEILIKAKDSSVVTVRSMEF
                     GVELNSDLNIQPRGEIFTSITPDSTPGMQWTNKYGYVYMSAMGYPVAIDGLNEAGLSF
                     GGLYLPGYTVYQDVPKGEESKALWNLDFGLWVLGNFSTVEEVRTAVQSVYVCFLESFP
                     IPSPLHFNVTDATGKSIIIEYTAEGLNIYDNVVGVLTNSPPYDWQTTNITNYLNLTPN
                     NPEPTSFNGKTFIPVGQGAGFVGIPGDWTPPSRFIKSTLMSHNAIQPTDITEAVNLAL
                     HFINVVDIPLGVSRMITDGKKDYDYTQWATIRDLTNRRYMFRTYDNLQVRSVDLNKLD
                     FKDGANKRVIKITGGDGIVDITPNQ"
     gene            1278..2756
                     /locus_tag="QF480_01540"
     CDS             1278..2756
                     /locus_tag="QF480_01540"
                     /inference="COORDINATES: protein motif:HMM:NF022525.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2779 domain-containing protein"
                     /protein_id="HJN05273.1"
                     /translation="MANSRLSKSTFIRGLQCDKSLYLYKHHYKLKDPTPASLQAVFDR
                     GTNVGLLAQKLFPFGVDASPENHFKMVESVNKTSKFIDQGETIIYEATFMYNNVLAAM
                     DILVKDAEGWKAYEVKSSTKVSDTYVKDAAIQYYTIVNSGIDLKDISIVHINKQYTRD
                     GELDIQQLFSTESVKDKVLEFLPQIPNEVNRLKNVISNSKAPNIKIGPHCFEPYACDF
                     KGTCWEHVPDYSVFDISNLSMKKKFELYNQETITLDQIDLDDVSLTPNQALQVQSEVE
                     ETSFVDIDQIRNFISNLNYPLYYLDFETISPAVPIYNNSRPYQQLVFQYSLHIQSSPG
                     SEITHKEYLADPKQDPRIGFVEQLITECGTYGDIIVYNIGFEKGKLKDLIELFPQYST
                     QLTDIINRLKDLMIPFQQKWYYTPKMKGSYSIKYVLPALVPELSYNNLEIKEGETASN
                     TFLSMANGTFKGNQEETRKQLLEYCKLDTLAMVKIIERLKSV"
BASE COUNT         1019 a          514 c          529 g          841 t
ORIGIN      
        1 cacaaaaaat aaaacaccct atttataggc tgttcagagt aataaaagtg tttttataaa
       61 aaagtggcga aaacaggaaa tgtttatgaa aaatatataa attagcattc taattattaa
      121 aataatacca atgataaaaa aacttcaact tataataatt attagtgcat tgctacttcc
      181 ttttaattca tcaagagcat gcacagaaat actaattaaa gcaaaggact catcagtagt
      241 aactgtaagg agcatggaat ttggggtaga actcaactca gaccttaaca tacagccaag
      301 aggagaaatt tttacaagta ttacaccaga tagcacacct ggtatgcaat ggacaaacaa
      361 atatggttat gtatacatga gtgccatggg ataccctgtg gcaattgatg gattaaacga
      421 agctgggttg tcctttggag ggctttatct acctggctac actgtttatc aagatgttcc
      481 aaagggagaa gaatcaaaag cactttggaa cttggatttt ggattatggg tactgggaaa
      541 tttcagcact gttgaagaag taagaaccgc agtacaatca gtgtacgttt gctttttaga
      601 atcatttcca attcctagcc cattgcactt taatgttaca gatgccacgg gtaaatccat
      661 aataattgaa tacacagctg aaggattaaa tatttatgat aatgtggtgg gagtgttaac
      721 aaactcgcct ccttatgact ggcaaacaac taatataaca aactacctta acctaacacc
      781 aaataatcct gaacccacat catttaacgg taaaacattt atacccgttg ggcaaggtgc
      841 tggctttgtt gggataccag gtgactggac acctccatca cgtttcataa agtcaacatt
      901 aatgtcgcac aatgcaatac aacccactga tattacagaa gcagtaaacc ttgcattgca
      961 ttttattaac gtggttgaca ttccacttgg agtatcacga atgataaccg atgggaaaaa
     1021 agattatgac tatactcaat gggcaaccat aagagactta acaaaccgta ggtatatgtt
     1081 tagaacctac gacaatttac aagttcgttc cgtagaccta aacaaattag actttaagga
     1141 tggtgccaac aaacgtgtaa ttaaaatcac gggaggtgat ggtattgtag atataacacc
     1201 aaaccaatag ttacatagtt ttgtttggtt taggataatt atttggttag ttttacagtg
     1261 taattatctg gcagttaatg gcaaatagca gactttctaa atcaactttt ataaggggac
     1321 ttcaatgtga taagtctctt tacttatata agcaccatta caaattaaaa gatccaacac
     1381 ctgcatcact acaggccgtt tttgataggg gaaccaatgt tggtttatta gcacaaaaac
     1441 ttttcccatt tggtgttgac gcttcccccg aaaaccattt caagatggta gaatcggtta
     1501 ataaaacatc aaagttcata gatcaaggag agactattat ctatgaggct actttcatgt
     1561 acaacaatgt gctggcagcc atggatatcc tagtgaagga tgccgagggt tggaaagcct
     1621 atgaagttaa gagctcaacc aaggtatcag atacttatgt taaggatgct gctattcagt
     1681 attacaccat tgttaattct ggtattgatc ttaaggacat atcaattgta catattaaca
     1741 aacaatacac cagagacgga gagctggata tacagcaact cttcagcact gaatccgtta
     1801 aagataaagt attggagttc cttcctcaaa taccaaatga ggtaaatcga ctaaagaatg
     1861 taataagcaa ctctaaggct cctaacatta agattggacc tcattgtttc gaaccttatg
     1921 catgtgactt caaaggaaca tgctgggagc atgtacctga ttattctgtg tttgatatat
     1981 caaacttaag tatgaagaag aaatttgaac tgtataacca ggaaacaatt accttggatc
     2041 aaatcgacct tgatgatgtt tcattaactc ctaatcaagc gctccaagta caatcagaag
     2101 ttgaagaaac ctcttttgtt gatattgacc agatcaggaa ttttatatct aacttgaatt
     2161 accctctgta ttatctcgac tttgaaacga ttagtcctgc tgtgccaata tataacaaca
     2221 gtaggccata ccaacaattg gtatttcagt attctctaca tattcaaagc tccccaggtt
     2281 ctgaaataac ccacaaagaa tatctggcag acccaaaaca agatccgaga attggatttg
     2341 ttgaacagct tattaccgag tgcggaacct atggagacat tattgtttac aatataggct
     2401 ttgaaaaggg taagctaaag gatctaattg agctttttcc acagtactca acacaactaa
     2461 cagacattat taatagactc aaggacttaa tgattccctt tcagcagaag tggtattata
     2521 cccctaaaat gaaggggagt tattcaataa agtatgttct gcccgctctg gtgcccgagc
     2581 tatcttataa caaccttgaa ataaaggaag gtgaaaccgc atcaaacact tttctatcca
     2641 tggccaatgg aacctttaaa ggaaaccaag aagaaacaag gaaacaactt ttggagtatt
     2701 gcaaattgga taccctggca atggttaaga ttattgaacg attaaagtca gtttagccaa
     2761 accgttggac atcatttatg aaaagtaaag gatgcagtaa tttaacacat atctaattgt
     2821 atttggaaat ttatgtaact ttcagaaaat tatatggata ttataattga attgctgacg
     2881 tatacagatg tataacatta aat
//
LOCUS       DASCQP010000091         2432 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000410024, whole genome shotgun sequence.
ACCESSION   DASCQP010000091 DASCQP010000000
VERSION     DASCQP010000091.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2432)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2432)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2432
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000410024"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..445
                     /locus_tag="QF480_01545"
     CDS             <1..445
                     /locus_tag="QF480_01545"
                     /inference="COORDINATES: protein motif:HMM:NF012235.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJN05274.1"
                     /translation="FTGKLTAVENKKIINALNVVGANELIYRYFHSLSDGEKQKVLIA
                     RAIAQDTPIILLDEPNAFIDSPGRVIIMNLLNELILKHNKTILLTTHDTELALRYATS
                     LWLLGKENYFKVGTPDKMAESGLINQLFDREGVVFNKVSKRFETN"
     gene            528..965
                     /locus_tag="QF480_01550"
     CDS             528..965
                     /locus_tag="QF480_01550"
                     /inference="COORDINATES: protein motif:HMM:NF016370.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease domain-containing protein"
                     /protein_id="HJN05275.1"
                     /translation="MKRKILPYNRKLKPLAKALRKNMTFAEVLLWSELKHKGMCGYDF
                     DRQRPIYNYIVDFYCKDLMLAIEIDGISHYSEEAFKSDEIRQREIEALGVSFLRFDDE
                     EVRNDMLNVLRSIEGWILDWEDVNKDRNYPGREPTPNPSKEGS"
     gene            complement(1036..1965)
                     /locus_tag="QF480_01555"
     CDS             complement(1036..1965)
                     /locus_tag="QF480_01555"
                     /inference="COORDINATES: protein motif:HMM:NF033516.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HJN05276.1"
                     /translation="MEEIKENYPRIGLAKLCGWFGITRQAYYQNSWRASDVSIEESLV
                     LNEVRKIRKLHKRMGTRKLYDKLQPFILEHQIKMGRDALFNLLSANYLLVRKRKRRIK
                     TTQSFHWLRKYPNLIREFIPSAINQLWVSDITYWNIEKGFVYISLITDAYSRKIVGYH
                     VASSLESIETMQALKMALTSLNGELKNHVQLVHHSDRGLQYCSHTYVKLLKDNNIRIS
                     MTENGDPLENVIAERVNGILKDEYLSDYSIETINEAKEVLDFAVKLYNQDRPHNSISN
                     FYPDQVHKLNLKAERLWKNYYKKNSTIVNQLQD"
     gene            complement(1953..>2432)
                     /locus_tag="QF480_01560"
     CDS             complement(1953..>2432)
                     /locus_tag="QF480_01560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05277.1"
                     /translation="IGLHKNKIMTDKSKLFSGFTKSSYHRSPSIRFTTELKHKMILDY
                     LNSDLTKRDIWEKYTGRQTEHGKILSWMRELGYDDSVPQRITSFVSNPLLMKKKELAP
                     DEDSFETIQLKKRIAELEQQVSDSEMRAAAFSTMVDLAEKEFNISIRKKYNTKPLKK"
BASE COUNT          751 a          417 c          421 g          843 t
ORIGIN      
        1 ctttaccggc aagttaactg cagttgaaaa taaaaagata atcaatgcgc tcaatgttgt
       61 tggagctaac gaattaatat accgttattt ccatagttta agtgatggag aaaagcaaaa
      121 agttctcata gcaagggcta ttgctcagga tacaccaata atattacttg atgaacctaa
      181 tgcatttatt gactcacccg gcagggttat aattatgaat ctcctgaatg aacttatttt
      241 aaagcataat aaaacaatat tattaacaac gcatgatact gaacttgcac ttagatatgc
      301 aaccagctta tggctcctcg gtaaagaaaa ttattttaaa gtgggtacac ccgataaaat
      361 ggctgagtct ggtttgatta atcaactctt tgacagagaa ggagtcgtct ttaataaagt
      421 gagtaaacga tttgaaacta attgatgagt gagaaattac atgtaattat tacgttcccc
      481 tcctcggagg ggcaaggggt gagtctttat actacttata ttaataaatg aaaagaaaaa
      541 tattgccata caatcgcaaa cttaaaccat tagcaaaggc tctacgaaaa aacatgacct
      601 ttgcagaggt tctgctttgg agtgagctta aacataaagg aatgtgtggc tatgattttg
      661 atcgtcagcg accaatatat aattacattg ttgattttta ttgcaaggat ttaatgctgg
      721 cgatagagat agatggaatt agtcattatt cagaagaggc ttttaagtcg gatgaaatta
      781 gacaacgcga aattgaggct ttgggggtga gttttctgcg ctttgacgat gaagaagtaa
      841 gaaatgacat gttgaatgta ttacgtagta ttgaaggttg gattctggat tgggaagatg
      901 ttaataaaga taggaattat ccaggtagag aacccacccc caacccctcc aaagagggga
      961 gttagacata tgactcgtcc taaaataagt ttacatgttt ataattaaat cctattatta
     1021 atttacacat acattttagt cctgtaactg gtttacaata gtactatttt tcttgtaata
     1081 atttttccaa agccgttctg ctttgagatt gagtttgtgt acctgatctg gatagaagtt
     1141 actaatgcta ttatgaggtc tgtcctgatt ataaagttta accgcaaaat caaggacttc
     1201 ttttgcttca ttaatcgttt ctatagaata atcagataag tattcatcct ttagaattcc
     1261 atttactcgt tcagcaatta cattttctaa aggatctcca ttctcagtca tactgattct
     1321 gatattattg tccttcaaaa gtttcacata agtatgagaa caatattgta ggccacgatc
     1381 agagtgatga accagttgaa cgtggttctt cagctcgcca tttaggcttg taagagccat
     1441 cttcagtgcc tgcatggtct caatactctc taacgatgat gcaacatgat aaccgacaat
     1501 tttgcgagaa tatgcatccg ttataagact gatatataca aagccttttt ctatattcca
     1561 ataagtaata tcactaaccc atagctggtt aatggcactt ggaataaatt ctcttattag
     1621 gttaggatac tttcttaacc aatggaaaga ttgggttgtt tttattctcc gttttcgttt
     1681 tcttactaat aaataattag cagaaagcag gttaaataaa gcatcccttc ccatttttat
     1741 ttgatgttct agtataaatg gttgcaattt atcataaagt tttctggttc ccattctctt
     1801 atgaagctta cgtattttac ggacttcatt cagaactaaa ctttcttcaa tacttacatc
     1861 agaagctctc cagctattct gatagtaagc ttgcctggta ataccaaacc atccacataa
     1921 tttggcaagt cctatgcgtg gataattctc ttttatttct tcaatggctt ggtattgtac
     1981 ttttttctga ttgaaatatt aaactccttt tccgctaaat caaccatagt tgaaaaagca
     2041 gctgctctca tttctgaatc actaacttgc tgctctaact ccgcaattct tttttttaat
     2101 tgtattgtct caaatgagtc ttcatcaggt gcaagttctt tctttttcat tagtaatgga
     2161 tttgatacaa agctagttat tctttgtgga acactatcat cataacctaa ttctcgcatc
     2221 caacttagta tcttaccatg ctctgtttgt cttccagtat acttttccca tatatctctt
     2281 tttgtaagat cagaattgag ataatcaagt atcattttgt gttttagctc agtggtaaaa
     2341 cgaatacttg gcgatctgtg atatgagctc ttcgtaaatc ctgagaatag tttactttta
     2401 tctgtcataa tcttgttttt gtgtaaacct at
//
LOCUS       DASCQP010000092         3116 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000413193, whole genome shotgun sequence.
ACCESSION   DASCQP010000092 DASCQP010000000
VERSION     DASCQP010000092.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3116)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3116)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3116
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000413193"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1352)
                     /locus_tag="QF480_01565"
     CDS             complement(<1..1352)
                     /locus_tag="QF480_01565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05278.1"
                     /translation="MKKLLLTVLAFGIGFSSFSQTKHVARSTKAPNSKVLMEKAPQQS
                     ARTIMASEKPAPKTETLNGVAATFIPLGQAGNTYGIYGNPRTYLWADPNINSVVFTHR
                     MIGGTEVEGNSRIAYDVSTDGGTTWTNNVHVYSPLGPGPQYPDAAGRYPQGAIINPAG
                     NTDPANAFYSYFIATLDMTNGNWGGYGYGSNVLTETDPPNPSQVNLTTGDGYYRLIPD
                     AYTVTQDAVAWYFDGSFDNPETYDYTGELIVGRGEIEDGELVIEESLMEALGALDGIN
                     DCKIAFAPDAQTGYMLIMSDSESDPQPYTNYHPILFKTTDAGDTWGDAVHILLGGEDG
                     NETIKNYWSDETMEEVYGAGYNRDEINYNMGYSVDLIVDSKGNPHVTGIIALATDAGT
                     WYPNEGTMATWHLYSDDGGSTWVADPLYDNIFFDGDIGGLGQWNRPYAASTIDGHYLF
                     "
     gene            complement(1579..>3116)
                     /locus_tag="QF480_01570"
     CDS             complement(1579..>3116)
                     /locus_tag="QF480_01570"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN05279.1"
                     /translation="PTGPGPTYPMDAGRYPQGGIINPEGNTDPANAYYAFYICTLDDS
                     QGSNWGGAAVGSNALTETDPPNASQINLTSSGDYYRYVPDAYTITQQGKAWNLQPSMD
                     VSSGSPIYMGDLIIGPGEILDGEITYDGDLMSFLAPNDGINDSKIAFAPDGQTGYILV
                     MSDSESDPQPYTSYHPILLKTTDGGDTWSDPNHVILGSEDGISTVKNYWSDETMEEVY
                     GAGFNRDEIYYNMGYQTDLIIDSKGNPHITGIIALGTEDGWYPNEGTMATWHVYSDDG
                     GSTWVADALYDNIWLRGEPAGLVMYNRPYAASTMDGHYLFFSWIDTDLEGAEANLNPN
                     IFVTGYDSEDHTYNQSGVQNVTALSLYWFAAFYGSMSQYVFAEENGDVWDCEIPFVFT
                     EYTDPADPAAEMNFYYIKGFNLPMPVGIDSHEGLANFSVSQNSPNPAVNNTSILVTSE
                     TAGVINLRVNNILGQVVHKESVNNSALAHTFNINVSNLESGIYFYTVEIGKSSITKKM
                     LVK"
BASE COUNT          960 a          648 c          548 g          960 t
ORIGIN      
        1 aagaatagat aatgtccatc aattgttgaa gcagcataag gacgattcca ctgacctaac
       61 ccaccaatat cgccatcaaa gaatatatta tcgtataatg gatcagcaac ccatgtgcta
      121 ccaccatcat ctgaataaag atgccaagta gccatagtac cttcattagg ataccaagta
      181 cctgcatcag tagcaagagc aattatacct gtaacatgtg ggttaccttt tgagtctaca
      241 ataagatcaa cagaataacc catgttataa tttatctcat ccctgttata tccggctcca
      301 taaacctctt ccatagtttc atcagaccaa taattcttta tagtttcatt cccatcttca
      361 cctccaagca atatgtgaac agcatcgccc catgtatcac cggcatcagt agttttgaaa
      421 aggattgggt gataattagt ataaggttgc ggatcacttt ccgaatcact cataataagc
      481 atatatccgg tttgggcatc aggggcaaat gcaattttac agtcgttaat accgtcaaga
      541 gctccaagag cttccattaa actttcttca ataactaatt caccatcctc tatctcacct
      601 cttccgacta ttagttctcc ggtgtagtcg taggtttcag gattatcaaa gctaccatca
      661 aaataccagg caacagcatc ctgagttaca gtataagcat caggtataag tcgataataa
      721 ccatctccgg tagttaggtt aacctgtgat ggattaggag gatcggtttc tgttagtacg
      781 tttgagccat atccataacc accccagtta ccatttgtca tatcaagtgt agcaataaaa
      841 taagaataga atgcattagc aggatctgta tttcctgccg ggttgattat tgcaccttga
      901 ggatatctac ctgcagcatc aggatactgc ggaccaggtc ctaaaggtga atatacatgt
      961 acattgtttg tccaggtagt gccaccatca gttgatacat cataagcaat acgactgtta
     1021 ccttcaacct ctgtaccgcc tatcatacga tgtgtaaaaa caacactgtt aatattcgga
     1081 tcggcccaga gataagttct tggatttccg taaataccat aagtattacc agcttgtcct
     1141 agcggaataa aggtagcagc aactccgttc agagtttcag tttttggggc aggcttttcg
     1201 cttgccataa tggttcgagc actctgctgt ggtgcctttt ccatcaatac tttcgaattt
     1261 ggagctttgg tacttcttgc cacatgctta gtttgtgaga aagaagaaaa accaattcca
     1321 aaagctaata cagtaagtaa taattttttc atgattttag ttttaattta acatctcttt
     1381 aactatcttc tcatttcgaa gtatcaaata tagtataata ttatcataat tgaattaata
     1441 gttatttaat attaatgttt acttaagatt gaattcctga acttattaac gtcaaagtta
     1501 taataaatta actaaaaagc caataaaaaa aggctgcctg tttaggcagc ctttttttta
     1561 aagaataact aaaaatgctt attttacaag cattttcttg gttattgaac tttttccaat
     1621 ttctacagtg tagaaataaa ttcctgattc caagttgctt acatttatat tgaaagtatg
     1681 tgcaagagca ctgttattaa cactttcctt atgaacaacc tgtccaagta tattgttaac
     1741 tcttaagttt ataacacctg ctgtttctga tgttacaagt atactagtat tgttaaccgc
     1801 agggttagga ctattttgtg atacagagaa gttagctaat ccttcatgac tatcaatgcc
     1861 aactggcata ggcagattga accctttaat gtagtagaaa ttcatttctg cagcaggatc
     1921 agcaggatca gtgtactctg taaatacaaa tggaatttca caatcccaaa catcgccatt
     1981 ttcttcagca aaaacatatt gtgacataga gccataaaat gcggcaaacc agtaaaggct
     2041 taatgctgtt acgttttgaa ctccactttg gttataagtg tgatcttcag aatcataacc
     2101 tgttacaaaa atatttggat taaggttagc ttcggcaccc tcaaggtctg tatcaatcca
     2161 ggaaaagaac aaatagtgcc catccatagt tgatgcagcg taaggtcggt tatacattac
     2221 taaacctgct ggttcgcctc gaagccaaat attgtcgtac aatgcgtcgg caacccaagt
     2281 actaccacca tcatctgaat aaacatgcca ggtagccatt gtaccttcat taggatacca
     2341 gccatcttct gtaccaagag caattatccc ggttatatgt ggattacctt tactatcaat
     2401 tataagatcg gtctggtaac ccatgttata ataaatttca tccctgttaa atccggcacc
     2461 ataaacctct tccatagttt catcagacca ataattcttt acagtcgaga taccatcttc
     2521 acttccaaga attacgtgat taggatcgct ccaagtgtca ccgccatcag tagttttgag
     2581 aaggattggg tgataactag tataaggttg cggatcactt tccgaatcac tcataacaag
     2641 aatatatccg gtttgtccat caggtgcgaa tgcaatttta gaatcgttta tgccatcatt
     2701 tggagcaaga aagctcatta aatcaccatc ataggttatt tctccatcaa gtatttcacc
     2761 aggtccaatt attaaatcac ccatatatat aggagaacca ctgctcacat ccatgctagg
     2821 ttgaagattc caggctttgc cctgctgagt aattgtatat gcatctggta catagcgata
     2881 gtaatcacca gaggaggtta agttaatctg tgatgcgttt ggaggatcag tttcggtaag
     2941 agcgtttgaa ccgactgcag caccacccca attactacct tggctgtcat cgagagtaca
     3001 aatataaaat gcgtaatatg cattagcagg atcagtattt ccttcaggat tgattattcc
     3061 tccctgagga tatctacccg catccatagg gtaagttggc ccgggtcctg ttggag
//
LOCUS       DASCQP010000093         1884 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000425761, whole genome shotgun sequence.
ACCESSION   DASCQP010000093 DASCQP010000000
VERSION     DASCQP010000093.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1884)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1884)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1884
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000425761"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..171)
                     /locus_tag="QF480_01575"
     CDS             complement(<1..171)
                     /locus_tag="QF480_01575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005778195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HJN05280.1"
                     /translation="MKILVTGGTGYIGSHTVVELQNKGHEVIIVDNLSNSSAEIVDKI
                     TLITGIKPDFEIF"
     gene            complement(227..805)
                     /locus_tag="QF480_01580"
     CDS             complement(227..805)
                     /locus_tag="QF480_01580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005831263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DapH/DapD/GlmU-related protein"
                     /protein_id="HJN05281.1"
                     /translation="MEDNYFAHETAVVDEGCNIASGTKIWHFSHLMTGCVIGENCNIG
                     QNVVVSPDVVLGKNVKVQNNVSIYTGVICEDDVFLGPSMVFTNITNPRSGVIRRGQYT
                     RTLVKKGASIGANATIVCGYDIGEYAFIGAGAVVTKEVPPYALVVGNPAHHVGWMSEF
                     GHRLNFDDKGFAVCSESNEKYQLKDNSVRKID"
     gene            complement(817..>1884)
                     /locus_tag="QF480_01585"
     CDS             complement(817..>1884)
                     /locus_tag="QF480_01585"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010801365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HJN05282.1"
                     /translation="AVLDIMSEASFINGPAVKEFQKSFEEYLGIKHVIPCANGTDALQ
                     VALMALNLKPGDEVITTSFTFIATAEVIALLKLKPVLVDVLPDTFNIDPVAVENAITS
                     KTKAIIPVHLFGQSADIHSLIKIAQKHNLYIIEDTAQAIGADFTCPESGKTKKIGTFG
                     HIGCTSFFPSKNLGAFGDGGAIFTNDDELADKMRMIVNHGMKRRYYHDEIGVNSRLDS
                     MQAAILNIKLRHLDEYSTARQLAAAYYNEAFAGNKKIKTPITADSTTHVFHQYTLVLV
                     DVDREGLMKHLASKGIASAVYYPVPLHLQKAYLDPRYNEGDFPITEMLCNSVISLPIH
                     TELTPEIQKEITDAVLEFVNK"
BASE COUNT          588 a          375 c          297 g          624 t
ORIGIN      
        1 gaatatctca aagtcaggtt taatgcctgt aatcaaggta attttatcta caatttcagc
       61 acttgaatta ctaagattgt caacaataat aacttcatgc cctttatttt gtagttctac
      121 aacagtatga gaaccaatat atcctgtacc accagtaaca agtattttca tagtagtcta
      181 tatctttatt gagaactgta aaacgaataa tttaatttcc aatcggttaa tcaatttttc
      241 taacggaatt atcttttaat tgatattttt cattgctttc ggaacatacg gcaaatcctt
      301 tatcatcaaa attaagccga tgcccaaact cactcatcca acctacgtga tgggcaggat
      361 ttcctactac caaggcatat ggtggaactt cttttgtaac tactgcacca gctccaataa
      421 atgcatattc tcctatatca tatccacaaa caattgttgc attagcccca atacttgctc
      481 ctttttttac taatgtacga gtatattgcc ctctgcgaat aactccacta cgcgggtttg
      541 tgatattagt aaataccatc gatggtccta aaaatacatc atcttcgcaa ataacacctg
      601 tgtaaataga cacgttgttt tgcactttta cgtttttacc aagaacaaca tccggtgata
      661 ctactacgtt ctggccgata ttacaatttt cacctataac acaacctgtc attaaatgtg
      721 aaaaatgcca aatctttgtt ccagatgcaa tattacatcc ttcatcaaca actgcagttt
      781 catgagcaaa atagttatct tccattttaa taggccttat ttattaacaa attccagcac
      841 agcgtcagtt atctctttct gaatttcagg tgtaagttcg gtatgtatcg gcaacgagat
      901 taccgaatta caaagcatct ctgttatcgg aaagtcaccc tcattgtaac gtggatcaag
      961 ataagctttt tggagatgta atggaacggg ataatatact gcagaagcaa ttcccttact
     1021 tgcaagatgc ttcattaatc cttccctgtc aacatcaacg agtactaacg tatattgatg
     1081 aaaaacatga gttgtggaat ctgcagttat tggtgtttta atttttttat taccggcaaa
     1141 tgcttcattg taataagcag ctgccagttg tcttgccgtt gaatattcat caagatgacg
     1201 gagtttaata tttaagatgg ctgcttgcat actatcaaga cgagagttaa cacctatttc
     1261 atcgtgatag tacctgcgtt tcattccatg gttaactatc attctcatct tgtctgcaag
     1321 ttcatcatca tttgtaaaaa tagcaccacc gtcaccaaat gctcccagat tcttagatgg
     1381 aaagaaagat gtgcatccta tatggccaaa tgtgccgatt ttttttgttt tcccactttc
     1441 tggacaggta aaatcagcac caatagcttg agccgtatct tcgataatat aaagattatg
     1501 cttttgtgcg atttttatta atgaatgaat atcagcactt tgtccgaata aatgaactgg
     1561 tataattgcc ttggtttttg aagttattgc attctcaaca gcaacaggat caatgttaaa
     1621 agtgtcaggc agtacgtcaa ccaatacagg ctttaacttg agtaatgcaa ttacctctgc
     1681 tgtggcaata aaagtaaaag aagttgttat tacttcatca ccaggcttaa gattcagagc
     1741 cattaatgca acttgaagag catcagtgcc atttgcacaa ggtattacat gttttatgcc
     1801 caaatattct tcaaaacttt tttgaaattc cttaacagca ggaccattta taaatgaagc
     1861 ttcagacatt atgtctaaaa cagc
//
LOCUS       DASCQP010000094         3562 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000434026, whole genome shotgun sequence.
ACCESSION   DASCQP010000094 DASCQP010000000
VERSION     DASCQP010000094.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3562)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3562)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3562
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000434026"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..783
                     /locus_tag="QF480_01590"
     CDS             <1..783
                     /locus_tag="QF480_01590"
                     /inference="COORDINATES: protein motif:HMM:TIGR01494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HJN05283.1"
                     /translation="EKNLSLVNMKKFESVTGKGVRATYNDKLIGLGNQRLADDLKASI
                     NEKMRKDVEQRQMLGQTVMFLIIDKVVEGIVVVSDSIKETSASAIKNLQKMGIKVLML
                     TGDNKFTAKAVADELKLDGFLSDCLPADKFNKVKELQETGHIVAMAGDGINDAPALEL
                     ANVGIAMGTGTDIAMQSAEVTLVKGDLTGIVRARELSIKVMRNIKQNLFFAFVYNGLG
                     VPIAAGVLFPFFGILLNPMIAAAAMSFSSVSVITNALRLKNQ"
     gene            968..2221
                     /locus_tag="QF480_01595"
     CDS             968..2221
                     /locus_tag="QF480_01595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05284.1"
                     /translation="MDRIIKKKRWTIKKIVTIITIAAFSFLLIYLIFIRDNTSRLYVD
                     RNQLTISTVIVDKFQEFIPIDGIVFPKTTFYIDAIQGGVVEAIYEEDGDLVKKGDTLI
                     KLLNTAMELNYMEQETRMLAEINNLQNTKLSLEQNKFLRQKEIVQLQYSIDLAERDFE
                     RKVTLHKQKVIADKDFEDAEREFKFTRKQLEISLELQKLDSISRQAQKRDIETSLGRM
                     LENMKLLRKNMENAYVKSPANGKLSSFNLEIGETKSIGEHLGQVDLLDGYRLEARIDE
                     RYVSRVFSGQEARLNYAGETYELYIDKIYTDVTNGSFKVDLFFVDNRIPSGIKRGQTV
                     QVRLTFSGETDALIIKRGGFFQETGGSWIFVLDPSDDFAYKRPIKINRQNTGYYEISE
                     GLKEGEKVIVSTYDSFGNKDKLIFK"
     gene            2239..2925
                     /locus_tag="QF480_01600"
     CDS             2239..2925
                     /locus_tag="QF480_01600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005675863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJN05285.1"
                     /translation="MIKTNELTRIFRTDEIETTALSKVNLRIEKGEFVALMGPSGCGK
                     STLLNILGLLDNPTTGEFIFLGNNVAGYSERQRAKLRKENIGFVFQNFNLIDQLTVFE
                     NVELPLIYHGLTAKERKKRVVAALEQMKIRHRIKHFPNQLSGGQQQRVAVARAIVSNP
                     KFILADEPTGNLDSVHGDEVMNLLSNLNQNGTTIIMVTHSQRDAEYAQRVIMLFDGQV
                     INEKFTPTDK"
     gene            2931..>3562
                     /locus_tag="QF480_01605"
     CDS             2931..>3562
                     /locus_tag="QF480_01605"
                     /inference="COORDINATES: protein motif:HMM:NF024116.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJN05286.1"
                     /translation="MIWSYIKIAFRNLLRYKSFSLINILGLSIGLSASLLIALWVFDE
                     LSYDKFNDNSEQLYRIERHINFDGKIFDVPVTSAIYAPTIKKDVPQVVDYSRIYPIEV
                     SLKNHMNDNQEERVFFCDKGFFNLFTFPLERGDPETALVEPYSVVITKKAALAYFGEE
                     YPLDSMLEMEWGDEIKMFRVTGILDELPTQSHFQFDVLASFETLEELMPE"
BASE COUNT         1241 a          537 c          701 g         1083 t
ORIGIN      
        1 gaaaaaaacc tttcacttgt aaatatgaag aaatttgaat cggttaccgg gaaaggtgta
       61 cgtgcaactt ataacgataa gcttataggt ttgggaaacc aacggcttgc tgacgacctt
      121 aaagcatcta ttaacgaaaa aatgcgtaaa gatgttgaac aacgtcaaat gctgggacaa
      181 acagtcatgt ttttaattat cgataaggtt gttgaaggca ttgttgttgt atcagatagt
      241 attaaagaaa catcagcatc agcaattaaa aatcttcaaa aaatgggaat aaaagttctt
      301 atgcttacag gcgataacaa gtttacagca aaggctgttg ctgatgaatt gaaactggat
      361 ggatttttaa gcgactgcct tcctgcagat aagtttaata aagttaagga actacaagaa
      421 acgggacaca ttgttgctat ggctggtgac ggtataaacg atgctcctgc cctcgaactt
      481 gcaaatgttg gaatcgcgat gggaactggt accgacatag caatgcaaag cgcagaagta
      541 acgcttgtaa aaggcgattt aactggtatt gttagagcaa gagaattaag tattaaagtt
      601 atgcgtaata tcaagcaaaa cttgttcttt gctttcgtgt acaacggttt aggagtacct
      661 atagcagccg gggtattatt tccgttcttc ggcattctac taaatcctat gattgcagca
      721 gcagcaatga gctttagttc agtatctgtt ataacaaatg cattaaggct taagaatcaa
      781 taatataaga gcttattttt cagcctttga atgagtaatt tatctgtaca tatttgtaca
      841 aaaaagcgtg cgttatcgta catattattg gtagagtaaa caatgtaatt gcgtaacact
      901 caggtattca acacttatgt attgatggca taatattagc aatagtgcaa caaccaaatt
      961 aggctatatg gataggatta tcaagaagaa gagatggact ataaaaaaaa ttgtgacaat
     1021 tatcacaatt gcagctttta gttttttact tatttatcta atttttattc gcgataatac
     1081 atcaagatta tatgttgatc gcaaccaact aacaatttcc acggttattg tcgacaaatt
     1141 tcaggagttt atcccaatcg atggtattgt atttccaaaa acaacatttt acattgatgc
     1201 tattcaagga ggtgttgttg aggctattta tgaggaagat ggtgatttgg taaaaaaggg
     1261 agatacttta attaagttac tgaatactgc tatggaactt aattatatgg aacaggaaac
     1321 cagaatgctt gcagaaataa acaatcttca aaatacaaaa ttatcacttg aacaaaacaa
     1381 atttttgcga cagaaggaaa tagttcagct tcaatattct attgatttag ctgaacgtga
     1441 ttttgagcgt aaggtaacgc ttcataaaca aaaagttatt gctgataaag attttgaaga
     1501 tgctgaacgt gaattcaaat ttacacgtaa acaattagaa atttcacttg aacttcaaaa
     1561 gttagactcg atatcaagac aagcacaaaa aagggatata gaaacttctt taggcagaat
     1621 gcttgaaaat atgaagctac tacgtaagaa tatggaaaat gcttatgtaa agtcacctgc
     1681 aaacggcaaa ctatcatctt ttaaccttga gataggtgag actaaatcaa ttggcgaaca
     1741 tctgggtcag gtagatctat tagatggtta caggcttgaa gcccgtattg atgaacggta
     1801 tgtatcaaga gtgtttagcg ggcaggaagc gagattgaac tatgcaggtg aaacatatga
     1861 actttacatt gataaaatct atactgatgt aacaaacgga tcattcaaag tagacttatt
     1921 ttttgttgac aatcgtattc catctggtat aaagcgtggt caaaccgttc aggtacgatt
     1981 aacttttagt ggagagactg atgcacttat tattaaaaga ggcggattct tccaggaaac
     2041 tggtggcagt tggatctttg tgctggatcc ttctgacgac tttgcataca aacgcccaat
     2101 taagatcaat cgccaaaata caggttacta cgaaatttca gaaggattaa aagagggcga
     2161 aaaagttatt gtgtcaacat atgacagctt tggaaacaaa gacaagttaa tttttaaata
     2221 aataatataa gtcgaatcat gataaaaact aacgagttaa cacgaatatt tagaaccgac
     2281 gagattgaga caacagcatt aagtaaagtc aatctacgta ttgaaaaggg tgaatttgta
     2341 gcattgatgg gaccatcagg ttgtggtaag tcaactttgt taaacattct tggtttattg
     2401 gacaatccta ctaccggaga atttatattt ctgggcaata atgttgcagg ttatagcgaa
     2461 agacaacgag cgaagttaag aaaagaaaat attggttttg tatttcaaaa tttcaatctc
     2521 atagatcaac ttactgtttt tgagaatgtt gaattaccac ttatatatca cggtcttact
     2581 gcaaaagaaa gaaagaaaag agtagtagct gctctggaac aaatgaagat tagacatcga
     2641 attaagcatt tcccaaatca gttatctgga ggccagcaac aacgcgttgc tgtagcacgg
     2701 gcaatagtct ctaaccctaa gtttattcta gctgatgagc caaccggaaa cttggattct
     2761 gtgcatggag atgaagttat gaacttactt tccaatctta accaaaatgg cacaactatt
     2821 attatggtaa cacattctca aagagatgct gaatatgccc aacgtgttat tatgctattt
     2881 gacggacagg taattaatga aaaatttacg ccaactgata aatagcagat atgatttgga
     2941 gttatataaa aattgctttt agaaatttac tcaggtacaa gtcattttca ttaataaata
     3001 tacttggtct atctattgga ttgtcagctt ctttactaat agctttatgg gtttttgatg
     3061 aattaagcta tgataaattt aatgataatt cagagcaatt ataccgtata gaacgccata
     3121 tcaactttga tggaaaaatt ttcgatgtac ctgtaaccag tgctatatat gcaccaacca
     3181 tcaaaaagga tgttccacaa gtagttgatt actcacgtat ttatccgatt gaagtgtcat
     3241 taaaaaatca catgaatgac aatcaggagg agcgtgtttt tttctgtgat aaaggctttt
     3301 ttaatttatt tacttttcct ttagagcgag gagatccaga aacagcatta gtagagcctt
     3361 attcagttgt cattactaaa aaagctgctt tagcatattt tggagaggaa tatccgttgg
     3421 atagtatgct tgaaatggaa tggggagatg agataaaaat gtttagggta acaggtattc
     3481 ttgatgaact tccaactcaa agtcactttc agttcgatgt actagcttcc tttgaaactc
     3541 ttgaagaatt gatgcctgaa ag
//
LOCUS       DASCQP010000095         6759 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000436850, whole genome shotgun sequence.
ACCESSION   DASCQP010000095 DASCQP010000000
VERSION     DASCQP010000095.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 6759)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6759)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6759
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000436850"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            283..1335
                     /locus_tag="QF480_01610"
     CDS             283..1335
                     /locus_tag="QF480_01610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05287.1"
                     /translation="MTDRARVISLILFFIIISINSFSQVSDSLFDLSCEHEDLIILSE
                     DLEINITGRKTYLMIASITNNLTIVIKTPNGLSEFQPLTLPKKVDELYIYHAPSVRNI
                     DWDYEKSSVQYFNANIISGHPNSNDVRITRHVKRKRVIDLKGFFGYIDQFEYFLENLQ
                     VGDTLQLSYQIEIPFKDNWIRLLSNRIFFHGKYPKKSYSLSWCHNQDLEVDSLFVNHD
                     IPEVSLEGNKFCYHWSFNNLPGCLDEPGSKPYKTLPHFVFVPQSYDFEYTHFNSYKQE
                     FVPPYFLQASKRQDELWAENWDNVIGNKNKNNRGYQNVADKIVALAPDDKLGTGQMRY
                     FQQYMIDSVKYDPAIN"
     gene            1393..2397
                     /locus_tag="QF480_01615"
     CDS             1393..2397
                     /locus_tag="QF480_01615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05288.1"
                     /translation="MLKVNNLERIYGNIVPKLGLDIFTAYPIDKRVGEISPQYTPTVK
                     ENDLLFAIALKDKTLGFVIPKSDKNNYYFEEVPFYYEDIPVLLLHYTDYPNKLEKRNF
                     NTDFRQYKTPTSNWKDNYRKIQSKVTIDLENNIGEFKTRVILSGQYSTLTRSIYCSGP
                     VDSTIDAKYLVPIWKISDNVEIKNIKPQHPMIYYPFKITITAEYIANELFTVENKQYV
                     LKPGNWFKIIYSQGICDEPRFLDYYPDFVGSDSYSYMLEFKNPINIISTLDTVTITNK
                     YGHFSFLIKQIGENKVLLNCNTNIRAKKISKDSIEFVKEINHAISLLEQKEIIFELVE
                     "
     gene            complement(2410..5415)
                     /locus_tag="QF480_01620"
     CDS             complement(2410..5415)
                     /locus_tag="QF480_01620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="right-handed parallel beta-helix
                     repeat-containing protein"
                     /protein_id="HJN05289.1"
                     /translation="MKYQVKITVTLLIIATIALISSCFRNYKHSKERNIYSSLETLSK
                     DKKHFVADSNSKYIFKGGNFQSGIQKRSGNFSVITTPKNAFSLSIGLPRIKQDSYVEA
                     SVWRKGEFGHLVAVTSGPTAYISTSDAVEIDNNGWSKLSLQFYMPPVKDFQELKVYVW
                     NSGKDTVFFDDISINVIDKKIFPAFREDALHIEMDTSEYLKLMDVRKRAFNAGILQTT
                     DDDWIKGMVFADGGLMKSSLRLKGDWLDHLHGNKWSFRVKLKKGNSWNNMRVFSVQNP
                     MARLGVNEWFFHKFLITEGLLTTRYGFIPTTINGDNLGLYAWEEHFTKQLVESQGRRE
                     GPIVRFQEDALWDTRVFDKNGKRNNLKTPNFETSIIKPFSGSKIIADSILFKQFLIAQ
                     NLMYQYKHRLMPASKIFNIEMLAKYFASADVFLTRHSTKMHNQRFYYNPVLCKLEPIA
                     YDCYSDIERYIKSTNPIYGYLHYDAIGSLDDEYLMARELFNDTLFTPLYINYLKKYSS
                     EKFLDSLFDHYKNQIYFYDSLISIEFPEQYFFQYEILENATNIRNELPAFKKQFVTMK
                     KENRHWKNTSKTIINYDTILKDFMAPNLITCYRQKDYGDSSYYKIYNFYPDDIIVLGL
                     GTGDKRIKEVIVPVPIVKGFADGKSGTVMFSAENANLNYLFFSIKDHNEIMTTEIMLW
                     PEPTAEQTPLQQMLTAYPFPDTNIIEKVENDKVWIKPGNVTMSNTVIIPMGYRVYFHE
                     GTTLNMINKAGFISYSPININGTKQKPVTITSTDFSANGFTVLQANGMSQIKNTSFNN
                     LNTLNYRGWTLTGAVNFYESDVTIINTTFYRNQCEDALNIIRSNFTLENSVFDYIQSD
                     AFDSDFSEGKVLETKFTNIGNDAIDFSGSQIVIKDVEINNANDKGISGGENSTLLVEN
                     TTIKAAGIGLASKDLSIIEVNNCIITDCNYGIVLLQKKPEYGPSTLILNNTLLRNSKT
                     RSLIELGSIVIENSDTIRGTQKNCAELFY"
     gene            5646..6626
                     /locus_tag="QF480_01625"
     CDS             5646..6626
                     /locus_tag="QF480_01625"
                     /inference="COORDINATES: protein motif:HMM:NF013125.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lamin tail domain-containing protein"
                     /protein_id="HJN05290.1"
                     /translation="MKKSLLFILALIMGAGLLAQECTDLFITEYVEGSGNNKAIEIYN
                     PTNEAIDLSLYQLVRYSNGSPQPNPVNLTGNIEPKSTFVVVLDKRDPDGTGLEQPVDS
                     ALQEKADIFLCPVYNINKMMYFNGNDAVTLETIAGQIIDLFAKIGPPDTDNGWTNITD
                     TTITWNNQGIPEDYTIVDYGVGPLFWLSWTRNHTLIRKPDISFGVTENPDPFMVFQQW
                     DSIPINTFDSLGFHNCNCTTFGIKENQAIVNVEIYPNPALDNSFTVEASEPIVSIEMF
                     DLSGRVTERIASDPNTYSKKITLDNKITGLLFVTVKFETGRAQTKKLLLK"
BASE COUNT         2242 a         1072 c         1123 g         2322 t
ORIGIN      
        1 atcaaacttt tgcagggatc ttgcttgatt ttcaatcctg aagaaggtgt tgtttcttgt
       61 tttaaataat agaacaaccc tgcaaagttt ttttgtatta cttttcttgt atactttgtt
      121 attattaaaa ttttacaaca ctataattgc aatctatagc attacaatta ttagtttgta
      181 caattaaata aatctttgac tgaaagtccg atgttgcggt ttcattattt ataggatatt
      241 ttgttaattt tatcgactta ttaaccaaat aacctaaata aaatgacaga tagagcccgg
      301 gtcattagtc ttatactttt ttttatcata attagtatca actcattttc tcaagtatca
      361 gacagcctgt ttgatttatc ttgtgagcac gaggatctta ttattcttag tgaagatttg
      421 gagataaata ttacaggtag aaaaacatac ctgatgattg caagtataac gaataattta
      481 actattgtta taaaaactcc caatggatta agtgaatttc agcctcttac actaccaaag
      541 aaggttgatg aattatacat ttatcacgct ccatcagtaa ggaatattga ttgggattac
      601 gaaaaaagta gtgttcaata ctttaatgcc aatataataa gtggccatcc caattctaat
      661 gatgttagga taactcgaca cgtaaaaaga aaaagagtaa ttgatttgaa gggctttttt
      721 ggttacatag atcagtttga atactttctt gaaaatttac aagtaggaga tactttacag
      781 ttatcctatc agatcgaaat accatttaag gacaattgga ttagattatt gtcaaacaga
      841 atctttttcc atggaaaata cccaaaaaaa tcatatagtt tatcttggtg ccataatcaa
      901 gaccttgagg tagattccct ttttgttaat catgatattc ctgaagtgag tttggaaggt
      961 aacaaattct gttatcattg gagttttaat aaccttccag gttgtcttga tgaacctgga
     1021 agcaaacctt ataagacgtt accacatttt gtttttgttc ctcaatctta tgattttgag
     1081 tatactcatt ttaattcata taaacaggaa tttgttcccc catattttct tcaggcgagt
     1141 aaaagacaag atgaactttg ggccgaaaat tgggataatg ttataggaaa caagaataaa
     1201 aacaataggg gttaccagaa tgttgcagat aaaatcgttg cattagctcc agatgataag
     1261 ttaggtacag ggcaaatgag atactttcaa caatatatga tagatagtgt taaatatgat
     1321 ccagctatta attagtacaa ccatgatgaa gatcagaaaa aacaaagggc cgggtttgaa
     1381 ctttgggcag gtttgttgaa agtcaataat cttgaacgta tttatgggaa tatagttcct
     1441 aagctaggat tagacatatt cactgcttat cctattgata agagggtagg agaaataagc
     1501 cctcaatata ctccaacagt aaaggaaaac gacctactgt ttgctattgc gcttaaagac
     1561 aaaacactgg gctttgttat tccaaaatct gataaaaata attattattt cgaggaagtc
     1621 cctttctatt atgaggatat cccggtgttg ttattacatt atacagatta tccgaataaa
     1681 ttagagaaaa gaaattttaa tactgatttt agacaatata aaacacctac aagtaattgg
     1741 aaagacaatt atcgcaagat acaaagtaaa gtgaccatcg atctggaaaa taacattggt
     1801 gaattcaaaa caagggtaat actatctggg caatattcaa ctctcacacg gagtatatat
     1861 tgttctggtc ctgttgattc aaccatagat gcaaaatacc ttgtgccaat ttggaaaata
     1921 tctgataatg tggaaataaa gaatataaaa ccacaacatc ctatgattta ttatccattt
     1981 aaaatcacaa ttacagcaga atatatagca aatgaactat ttacagtaga aaataaacaa
     2041 tatgtcttga aacctggaaa ttggtttaaa ataatttatt cacagggaat ttgcgatgaa
     2101 cccaggtttc ttgattatta tccggatttt gttggctctg atagctattc ttatatgctc
     2161 gaatttaaaa accccattaa tataatctcc actctagaca cagttactat cacaaataag
     2221 tatggtcact ttagcttttt gattaaacaa attggtgaga ataaagtatt actgaattgt
     2281 aacactaata ttcgagcaaa gaagataagc aaggattcta tcgaatttgt gaaagagatt
     2341 aaccatgcaa tttctttgct cgagcaaaaa gagattatat ttgaattggt tgagtaactg
     2401 agtttacaat taataaaata attcagcaca atttttttgt gttcctcgaa tggtatcgct
     2461 attctcgatt actatggaac caagttcgat aagtgaacgg gtttttgagt tacgaagcag
     2521 cgtattatta agtattaatg ttgatgggcc gtactcaggt tttttttgaa gtaaaacaat
     2581 accataatta caatctgtta tgatacagtt attaacttct atgattgata aatctttgga
     2641 tgcaagtcca atgcctgctg ctttgatagt tgtgttttca actaatagtg ttgagttttc
     2701 gcctccgctg attcctttgt catttgcatt atttatctca acatctttaa taactatttg
     2761 acttcctgag aaatcgattg catcatttcc aatatttgta aattttgttt caagtacttt
     2821 tccttcgcta aagtctgaat cgaaagcgtc gctttgtata taatcaaaca ctgaattttc
     2881 taatgtaaaa ttactccgta ttatgttaag tgcatcctcg cactgattcc tgtagaatgt
     2941 agtgtttata atagttacat ccgattcgta aaaattaaca gctcctgtaa gagtccaccc
     3001 tctatagttg agtgtgttaa gattattaaa tgacgtattt tttatttgcg acatcccatt
     3061 agcttgtagc acggtgaaac cattggcgga aaagtctgtg gatgtaatag ttactggttt
     3121 ctgttttgtg ccgtttatat taatcggtga atatgaaata aagccagctt tgtttatcat
     3181 gttgagtgtt gtgccttcat gaaaatacac ccgatatccc atcggaataa taactgtgtt
     3241 actcattgtt acatttccag gcttaatcca cactttgtca ttttctactt tttctatgat
     3301 gtttgtatca ggaaaaggat atgctgtaag catttgttga agaggtgttt gctcggcagt
     3361 aggctctggc caaagcatta tttcagtggt cataatttca ttatggtctt taatgctaaa
     3421 aaacaaataa ttcaaatttg cgttttcggc agaaaacatt acagttcctg attttccatc
     3481 ggcaaatccc tttactattg gtacaggtac aataacttct ttgattcttt tatctcctgt
     3541 gcccaaacca agaacaataa tgtcatcagg ataaaaatta tagattttat agtatgaaga
     3601 gtctccgtaa tctttttgcc tatagcatgt aataaggtta ggagccataa aatcttttag
     3661 gattgtatcg taattaatga ttgtttttga tgtatttttc caatgccggt tttccttttt
     3721 catagtaacg aactgctttt taaatgcagg aagttcattt cttatattag ttgcattttc
     3781 aagtatttca tattgaaaaa aatattgttc agggaattca atactaatca atgaatcgta
     3841 aaaataaatc tgatttttgt aatgatcaaa taatgaatcc aagaattttt ctgatgaata
     3901 ttttttcaaa taattgatat acaaaggagt aaataaagta tcattaaata attcccttgc
     3961 cataaggtat tcatcatcaa ggcttccaat ggcatcataa tgtaagtaac cataaatcgg
     4021 atttgtgctt ttaatatagc gttctatatc cgaatagcaa tcatacgcaa taggttcaag
     4081 cttacagagt acaggattat aataaaaacg ctggttatgc attttggtac tatgtctggt
     4141 aagaaacaca tcagccgagg caaaatattt ggcaagcatt tcgatattaa atatcttgga
     4201 tgctggcatg aggcggtgtt tgtattggta cattaaattc tgtgcaatta aaaactgctt
     4261 aaataatatg ctgtcagcga ttatcttcga gccagaaaag ggtttgataa tagatgtttc
     4321 aaaatttgga gttttcaaat tgtttctttt tccatttttg tcaaaaacgc gtgtgtccca
     4381 aagtgcgtct tcctgaaatc ttacaattgg gccttctctg cggccttgtg attctaccaa
     4441 ttgttttgta aaatgttctt cccaggcata tagaccaaga ttatctccgt ttattgttgt
     4501 tgggataaaa ccatacctcg tggttagcaa tccttctgtt attaagaatt tatggaagaa
     4561 ccattcgtta actccaaggc gcgccattgg gttttggact gagaatacac gcatgttatt
     4621 ccatgaattt ccttttttta gtttaactct aaacgaccat ttgttgccgt gaagatgatc
     4681 taaccaatcg cctttaagac gtaagctcga tttcataaga ccaccatctg caaaaaccat
     4741 cccttttatc cagtcgtcat cagtagtttg aagtatacca gcattaaatg ctcgttttct
     4801 cacatccata agtttaagat attctgatgt gtccatctca atatgaagtg catcttctct
     4861 aaacgcagga aatatttttt tatctataac attaatacta atatcatcaa aaaatacagt
     4921 atcctttcct gaattccaca catatacctt tagctcctgg aaatctttaa ctggtggcat
     4981 ataaaactgt aaacttagtt tgctccatcc attattatca atttcaacag catcactggt
     5041 ggaaatataa gctgtgggtc cagaggttac agctacaaga tggccgaatt caccttttcg
     5101 ccatacagaa gcttcaacat aactgtcttg ttttattctg ggtagtccaa tagataatga
     5161 aaaagcgttt tttggagttg ttatcaccga aaaattaccg cttctttttt gaatcccgga
     5221 ttgaaaattt ccgcctttaa aaatatattt actattgcta tcagctacaa agtgtttttt
     5281 atcttttgaa agagtttcaa gcgaagaata tatgttacgt tctttggaat gtttgtagtt
     5341 acgaaaacat gatgaaatca atgcaattgt ggctataatc aataatgtta ccgttatttt
     5401 aacttgatac ttcattagta gtttgtgtgt cgcaaatata acttaaacta cccaaacatt
     5461 gatatgttaa ttggtaacaa ctcttacgaa agtgactaac cttagattat tattacagta
     5521 attgagttgg atgacttaat cgattttttg tgaattaatt aactgatttg tcaaatttca
     5581 gatcagtaat taatattaca tttgctacaa taaatcatgt attaataata aaaaatacta
     5641 aacagatgaa aaaatcatta ctattcattc ttgcgttaat tatgggagca ggattgttag
     5701 ctcaagaatg cacagactta tttatcacag aatatgttga aggttcagga aacaataaag
     5761 ccatagagat ttacaatccg acaaatgaag caattgattt aagtttatac cagttagtta
     5821 gatattctaa tggcagtcca caacctaacc cagttaacct aacaggaaac atagaaccaa
     5881 aaagtacatt tgtggtagtt ttagacaaac gcgaccctga tggtactggt cttgaacaac
     5941 ctgtagattc tgcgttacaa gaaaaggctg atattttttt atgtcctgtt tataatatta
     6001 acaaaatgat gtattttaat ggaaacgatg ctgttacact tgaaacaata gcaggtcaaa
     6061 tcattgatct ttttgctaaa attggaccac cagataccga taatggatgg actaatatta
     6121 cagatacaac tattacatgg aataatcagg gaatccctga agattatact atagtggatt
     6181 atggagttgg gccactcttt tggttgtcat ggacaagaaa ccacacttta atcagaaaac
     6241 ctgatatttc ttttggggtt actgaaaacc cggacccttt tatggttttt cagcaatggg
     6301 attcaatacc cataaatact ttcgattctc taggatttca taactgtaat tgtacaacat
     6361 ttggcattaa agaaaatcaa gctattgtta atgtagaaat ttacccaaat ccagcgctgg
     6421 ataatagctt taccgtcgag gccagtgaac caatagtatc tattgaaatg tttgatcttt
     6481 ctggaagagt tactgaaaga attgcaagtg acccaaatac atactctaag aaaattactt
     6541 tagataataa aatcactgga ttactttttg taactgttaa atttgagaca ggaagagccc
     6601 aaaccaaaaa actattactt aaataagaca aaagaggtta ctatccactt gaaggattta
     6661 gatgacaata tttatggcct tagtggattt tttagtttgt ccaaaatcca ctttaatgag
     6721 caaaaaaata tttgtattac tggcattaat tactttttc
//
LOCUS       DASCQP010000096         2552 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000436941, whole genome shotgun sequence.
ACCESSION   DASCQP010000096 DASCQP010000000
VERSION     DASCQP010000096.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2552)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2552)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2552
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000436941"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..280)
                     /locus_tag="QF480_01630"
     CDS             complement(<1..280)
                     /locus_tag="QF480_01630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006841456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HJN05291.1"
                     /translation="MFYYLFKYLDQAFNLPGAGVFEYLSFRAALAIITSLIISLVFGK
                     RWISFLNRKQVGETIRDLGLEGQLEKQGTPTMGGLIILTSILVPVLLFA"
     gene            complement(285..1742)
                     /locus_tag="QF480_01635"
     CDS             complement(285..1742)
                     /locus_tag="QF480_01635"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018711894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HJN05292.1"
                     /translation="MKLLQDILYRSRTKEISGSLNIEITSVAFDSRKVMAGSLFVAIV
                     GTQVDGHDFIQKSIDKGAVAIVCNAMPSEVNPKITYVVVSNTSEALGYIASNYYDDPS
                     SKLKVIGVTGTNGKTTIVTLLYNLFTELGYSVGMLSTIQNKVNKQNIETTHTTPDALK
                     INDLLSSMVDDGCEYVFMEVSSHAIVQHRVTGIQFLGGVFTNITHDHLDYHVTFREYI
                     NAKKKFFDQLPANAFALTNIDDKNGNVIIQNTSAKKFTYGIKNIASFKGKVIENDLEG
                     MTLKVDGNELSSLLSGDFNAYNILAVYSIAILLEQNKEEILVCISKLSGVEGRFDIIR
                     STHGITAIIDYAHTPDALKNILETINSIRTHNEQLITVVGAGGNRDTSKRPLMAKLAS
                     LLSNRVILTSDNPRYEDANKILEDMRKGIDPAKKKVLMVIPDRNEAITTAFNIAQPGD
                     MILIAGKGHEKYQEIKGIKYPFDDKRIIAELMDTN"
     gene            complement(1752..>2552)
                     /locus_tag="QF480_01640"
     CDS             complement(1752..>2552)
                     /locus_tag="QF480_01640"
                     /inference="COORDINATES: protein motif:HMM:NF013100.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /protein_id="HJN05293.1"
                     /translation="YYNAIANNGVMVKPTFVSEIKEGGAVIEKFSTDIINSRIVSQTT
                     VDSAKSLLEGVVERGTGKYAFRNSPYKVAGKTGTAQIASKGGYNKTNYNASFVGYFPA
                     DNPRYSAIVVINNPSAGKYYGSSVAVPVFKEIADNLYSTSLVVEENKISHDNQNIPIP
                     KKVIWTNDVKSIYANLEIGDTIRFPVIGDWVKATNDKSKINFEEVAFSQNLVPNVIGM
                     KAKDAVFLMQNTGLKTIISGRGKVKHQSIKAGKRASSYSSIKLQLATY"
BASE COUNT          739 a          492 c          421 g          900 t
ORIGIN      
        1 ttgcaaaaag aagcacaggt acaaggatag atgtgagtat tatcaatcct cccatagttg
       61 gtgttccttg tttttccagt tgtccttcta atcccagatc acgaatagtt tcgcccacct
      121 gttttctatt caagaatgag atccagcgtt tgccaaaaac caggctgata ataagtgaag
      181 taataattgc cagggcagct ctaaatgaca gatattcgaa aacacctgcg ccaggtaaat
      241 taaaagcttg atctaaatat ttaaataagt agtaaaacat attattagtt tgtgtccatt
      301 agttctgcta ttattctttt gtcatcaaag gggtatttaa taccctttat ctcctgatat
      361 ttttcatggc ctttacctgc gattagaatc atatcaccag gttgcgctat attaaaggcg
      421 gtggttatgg cttcatttct gtcaggaata accataagca ccttcttttt tgccggatca
      481 attccttttc gcatatcctc taaaattttg tttgcatcct cataccttgg attgtcagag
      541 gtgagaatca ccctattgct taaaagagag gctagttttg ccattaaagg gcgcttactt
      601 gtatcacgat tacctccggc tccaacaact gtaattaatt gttcgttgtg tgttcgtata
      661 gagttgattg tttccagaat gttctttagg gcatcaggag tatgggcata atcaataatt
      721 gcagttatac catgtgttga tctgataata tcgaatcttc cttcaacgcc actgagcttg
      781 ctgatgcaaa caagaatttc ttccttgttt tgttcaagta gtatagctat ggaataaact
      841 gcaagtatgt tgtacgcgtt aaaatcacca gataggagag aggataattc atttccatct
      901 actttcaaag tcatgccttc cagatcattc tctatcacct ttcccttaaa ggaagcaatg
      961 ttttttattc catatgtgaa tttctttgca ctcgtatttt gaatgataac atttccattc
     1021 ttgtcatcaa tgtttgtcag tgcaaacgca ttagcaggta attgatcgaa gaatttcttc
     1081 ttcgcattta tatattccct gaaagtaaca tgataatcaa gatgatcatg tgtgatattt
     1141 gtgaaaactc cacctaaaaa ttgtattcca gtaaccctgt gctgaacaat agcatgtgag
     1201 cttacttcca tgaaaacata ctcacaccca tcatcaacca tcgaactcaa taaatcattg
     1261 atttttaagg catctggggt tgtatgtgta gtttcaatat tttgtttgtt aaccttattc
     1321 tgaatcgtgg acagcatccc gacactatat ccaagctcag taaacagatt gtaaagtaaa
     1381 gttacaatag tcgtttttcc attagtgcct gttaccccaa taactttgag tttactagat
     1441 gggtcatcat aataatttga agcaatataa cctaatgctt ctgaggtgtt acttacaaca
     1501 acatatgtta ttttcggatt tacttcgctt ggcattgcat tacaaacaat tgctacggca
     1561 cctttatcaa tagatttttg aataaaatca tgtccgtcaa cctgagtacc aactattgca
     1621 acaaataatg atcctgccat aactttacga gaatcaaaag caactgatgt tatctctata
     1681 tttagcgatc cactgatttc ttttgttcgt gaacgatata atatgtcttg gagtagtttc
     1741 aaactttttc tttaataagt agctaattgc agttttattg aactataact agaagcacgt
     1801 tttccggcct taattgattg atgttttact ttccctcttc ctgaaattat tgtttttaga
     1861 cctgtgtttt gcattaagaa aactgcatct tttgctttca ttccaataac atttggtacc
     1921 agattctggc taaaggcaac ttcctcaaaa tttattttac ttttatcatt agttgcttta
     1981 acccaatcgc ctatcactgg aaaccgaatt gtgtcaccta tttccagatt tgcataaata
     2041 gattttacat catttgtcca gattaccttt ttaggaatgg gaatgttttg gttatcatgt
     2101 gatattttat tctcttctac aacaagggat gtagaatata aattatcagc aatttcttta
     2161 aataccggta cagcaacact actcccataa tatttcccag cactagggtt gttaattaca
     2221 acgattgcag aataacgagg attgtcagca ggaaagtaac ctacaaatga cgcattatag
     2281 tttgtcttat tataaccacc ttttgaagct atttgagcgg ttcccgtttt gccggctact
     2341 ttatatggac tattgcgaaa tgcgtatttg ccggttccgc gttccactac accttctagt
     2401 agtgattttg cagagtcaac agttgtttgc gaaacaattc tgctattaat aatgtccgta
     2461 ctaaattttt caataacggc accaccctct tttatctctg atacaaaagt gggttttacc
     2521 attactccat tgtttgcaat tgcattgtag ta
//
LOCUS       DASCQP010000097         5412 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000436974, whole genome shotgun sequence.
ACCESSION   DASCQP010000097 DASCQP010000000
VERSION     DASCQP010000097.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 5412)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5412)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5412
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000436974"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            23..409
                     /gene="rpsI"
                     /locus_tag="QF480_01645"
     CDS             23..409
                     /gene="rpsI"
                     /locus_tag="QF480_01645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014708903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HJN05294.1"
                     /translation="MEVVNALGRRKTAIARVYLQDGNGKITINDRDFKEYFPTAILHY
                     VVEQPLQLTDNMGKYNIKVNLNGGGYTGQAEALRLGIARALVKIDPEFRPILKEKGLM
                     KRDPRMVERKKPGQPKARKKFQFSKR"
     gene            518..1396
                     /gene="rpsB"
                     /locus_tag="QF480_01650"
     CDS             518..1396
                     /gene="rpsB"
                     /locus_tag="QF480_01650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009135015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HJN05295.1"
                     /translation="MAKLSFDELLDAGVHFGHLRRKWNPNMAPYIFMERNGIHIIDLY
                     KTQAKLEDAQNAIKQIAKSGRRILFVATKKQAKSLVADLVKKINMPYVTERWPGGMLT
                     NFATIRKAVRKMANIDKMATTSSWTNLSKRERLQITRERAKLEKNLGSISDMSRLPAA
                     LFVVDINKERIAVAEARKLNIPIFAMVDTNTDPTLIDFAIPANDDASKSIYLIVNAAV
                     QAIAEGLNERKMAKEKQDVKEETTTDIDEVDIKSTSEALVKAEEDADKSAEKGAPAAP
                     VEGKPKRKRKTISKKN"
     gene            1427..2254
                     /gene="tsf"
                     /locus_tag="QF480_01655"
     CDS             1427..2254
                     /gene="tsf"
                     /locus_tag="QF480_01655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005469351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor Ts"
                     /protein_id="HJN05296.1"
                     /translation="MKITAQQVNELRKRTGAGMMDCKNALVETEGDMEKAIDVLRKKG
                     QKVAAKRAGRDAAEGVVLSKVSKDKKYAVAVMINCETDFVAKNADFIAYAESIIDVAI
                     ANYAKNIDELKALPLAGRTVDESITDQTGVIGEKIQLGRFDKVEAESTYAYIHPGNRL
                     ATIAGFNKSGDSLADAGKDVVMQIAAMDPVALDKDSVSDETVKREIEIGMDQARQEGK
                     PEAMLEKIAMGKLNKFYKENTLVNQAFIKDGKKNVSQYLQDVENGLTVTDFKRLALV"
     gene            2405..3124
                     /locus_tag="QF480_01660"
     CDS             2405..3124
                     /locus_tag="QF480_01660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05297.1"
                     /translation="MKTIIALILALIISVSAFSQVSESGDLNKKFYIRGGLSYPTWTY
                     YGYKNANALKDSLGAESRIGGIFEIGAIFMLNGINVGDNMRFGINVDFVSFKTQIFNL
                     SGSKNLYNFFVGSKIGPSFTYAPTKALAFDVFVKLNPVWVGATYLNHQDFDNGLDVYY
                     GYAQLMYSVGINVDLAVMYLGFEYDFGGLKLKNNDGMYFDPLRPDLESWEDPLNPEIN
                     PQMNATKVPMHGFNVTFGFNF"
     gene            3235..4044
                     /locus_tag="QF480_01665"
     CDS             3235..4044
                     /locus_tag="QF480_01665"
                     /EC_number="1.18.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF012402.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004324 - ferredoxin-NADP+ reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP reductase"
                     /protein_id="HJN05298.1"
                     /translation="MTLEDQLNSVVTQSVQVSPIMKIIKVKPEGWKFPEFEAGQFVAL
                     GLPPYASRCAEATDEFEPPKSDKLIRRAYSIASSSTEDSIEFYITLVNSGQLTPRIFE
                     LYIGDKIWLGKEAVGMFTLDQIDNDKNVILIATGTGVAPYMSMLRSNALKRTGKILVI
                     HGAANSWDLGYSSELKLLASIFNSFHYHPTITESNKEPVGWNGDTRFIDEIWKSGIAE
                     NTLGVKPTPKNTEVFLCGNPKMVEGMKELLYKDGFKDHKKKSPGEIHAEEF"
     gene            4104..4283
                     /locus_tag="QF480_01670"
     CDS             4104..4283
                     /locus_tag="QF480_01670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004585614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HJN05299.1"
                     /translation="MDNNEIICNCMQITKGEIVAAIKSGGLLTIDEVGDETEAGTVCG
                     SCHDDIEEILKEVNG"
     gene            4390..>5412
                     /locus_tag="QF480_01675"
     CDS             4390..>5412
                     /locus_tag="QF480_01675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease MutS2"
                     /protein_id="HJN05300.1"
                     /translation="MIYPASYEQKIGFGQIKKHISQLCISTIGQHFVEKIHFSSNIVA
                     IKKLLDQSSEFVDLLAIGKAFPTNDFIDLREDIQQLKTPGSFIEQEVLFNLVASLFTL
                     QEILNYFNETDKEAFPELKKLVDLVYLPEELLHEAQKIIDKKGEIRDSASDKLKTIRQ
                     SITSKQRKAFRETKKAFEKAKKSGWIPDNTEITIRNGRSVIPLKAANKRSIGGIIHDE
                     SSTGQTVFVEASMSFEINNEIKELESEERREITKILLSFTDNLRPNISDLIDAYRFLG
                     LIDFIRAKALFSIKIAAKQPIITNNKPVGIREAFHPLLFLSHKEKKKTVIPLDLALTD
                     ENRILII"
BASE COUNT         1937 a          858 c         1036 g         1581 t
ORIGIN      
        1 aaatcaatca gataaaacac ctatggaagt agttaatgca ctaggtagaa gaaaaactgc
       61 aatagccagg gtttatcttc aggatggaaa tggaaaaatc actattaacg atcgtgattt
      121 taaagagtat tttccaactg caatccttca ttatgttgtt gaacagccat tacagcttac
      181 cgacaatatg ggcaaataca acataaaagt taatctgaat ggtggaggtt atacaggtca
      241 ggcagaagca ttgcgactag gcattgcccg tgcgcttgtt aaaatagacc ctgagttccg
      301 tcccattcta aaagaaaaag gtttgatgaa gagagatcca cgtatggttg aacgtaaaaa
      361 accaggacaa cctaaggctc gcaaaaaatt ccagttcagt aaacgttaat tttcacatac
      421 attggaatga gtttagtatc caaattgctg taacctttta taaaaagcta tacagtaatt
      481 gcaaaagaga atgtaaacaa attaaaaaaa aattaaaatg gcaaaactta gttttgatga
      541 attgcttgat gcaggtgtac attttggtca cttgcgtaga aaatggaatc caaatatggc
      601 tccttatatt tttatggagc gtaatggtat tcacattatt gacctgtata aaacacaggc
      661 taaacttgaa gatgcacaaa atgctattaa acaaatagca aaatcaggta gaagaatatt
      721 atttgtagct actaaaaaac aggcaaaatc gttggtagct gatttggtaa aaaagataaa
      781 tatgccgtat gttactgagc gctggcccgg tggtatgctt acaaattttg caacaatccg
      841 caaagcagtt cgtaaaatgg ctaacatcga caaaatggct acaactagct catggacaaa
      901 cctatctaag agagaaagac ttcaaattac ccgtgaacgt gccaaacttg aaaagaacct
      961 tggtagtatt tctgatatga gtcgacttcc agctgcttta tttgttgttg atatcaataa
     1021 agaaagaatt gccgtggctg aagcaagaaa acttaacatc cctatttttg ctatggttga
     1081 tacaaacact gatcctactt tgatcgattt tgcgatacct gcaaatgatg atgcttcaaa
     1141 atcaatttat ttaattgtta atgcagcggt tcaggctatt gctgaaggat taaacgaacg
     1201 caaaatggcc aaagaaaagc aggatgttaa agaagaaacc acaacagata ttgatgaggt
     1261 agatattaaa tctacgtccg aagcactggt taaagcagaa gaggatgctg ataaatcagc
     1321 ggaaaaagga gctccggcag caccagttga aggaaaacct aaacgcaaaa gaaaaactat
     1381 ttccaaaaag aattaattgg ttataactta aaaataaagt aataaaatga agataactgc
     1441 ccaacaggta aacgaactga gaaaaagaac aggagcaggt atgatggact gcaagaatgc
     1501 cctcgttgaa actgaaggcg atatggagaa agccattgac gtactcagaa aaaaaggtca
     1561 aaaagttgct gcaaaacgtg caggtcgaga tgctgctgaa ggtgttgtac tttcaaaagt
     1621 tagtaaagat aaaaaatatg ctgtagcagt gatgataaat tgtgaaactg attttgttgc
     1681 aaaaaatgct gactttattg cgtatgccga aagtattata gatgttgcta ttgctaatta
     1741 cgcaaaaaat atcgatgagc ttaaggcttt accattagct ggtcgtacag ttgatgaatc
     1801 tataacagat cagactggag ttattggcga gaaaatccag ctgggccgtt ttgataaagt
     1861 tgaagctgaa agcacatatg catatattca tcccggtaac cggttagcta ctatcgctgg
     1921 gtttaataaa tcaggtgatt cacttgctga tgcaggaaaa gatgttgtta tgcaaattgc
     1981 tgcaatggat ccggtagctc ttgataaaga tagtgtttct gatgaaacag ttaaacggga
     2041 aatagagata ggcatggatc aagctcgtca ggaaggtaaa cctgaagcta tgcttgaaaa
     2101 aattgctatg ggaaaattga ataaatttta caaagaaaac actttggtaa accaagcatt
     2161 tattaaagat ggcaaaaaga atgttagtca atatttacaa gatgtagaga acggattaac
     2221 cgttactgat tttaagcgtc tggcacttgt ttaaaaatat tatttcttgt aaaaaggccg
     2281 attcaaatga gtcggccttt ttttatttca tttttttcat aatttagcac gaacaagatg
     2341 aaaatagttg gatatctttt taatcctcct atcttactca ctacgtaagc tcaaaattaa
     2401 ttaaatgaaa acaataatcg cccttatctt agcattaatt atctctgtgt ctgctttctc
     2461 ccaagtatcc gaatcaggtg atttaaataa aaaattctat atcagaggag gtctgtctta
     2521 cccaacttgg acatattacg gatataaaaa tgcaaacgca ttaaaagatt cattaggagc
     2581 ggaatccagg attggtggta tttttgaaat tggtgcaata tttatgctaa atggaatcaa
     2641 tgttggagat aacatgagat ttggtataaa cgttgatttc gtctctttta aaactcagat
     2701 atttaatttg tcgggaagta aaaaccttta caactttttt gtaggatcaa aaattggacc
     2761 ttcttttaca tatgccccta ctaaagcact tgcctttgat gtatttgtaa agttaaaccc
     2821 agtatgggta ggtgcaactt atttaaacca tcaggatttt gataatgggc ttgatgtata
     2881 ttatggttat gcccagctta tgtattctgt tgggataaat gtagatttag ctgttatgta
     2941 tctgggattt gaatatgatt ttggtgggtt aaaattgaaa aacaatgatg gcatgtactt
     3001 tgacccattg agacctgact tggaatcctg ggaagatcct ttgaatcctg aaataaaccc
     3061 tcaaatgaac gctactaaag tcccaatgca cggttttaac gtaacttttg gattcaattt
     3121 ttaaccgtta aactatacct tgaaaaccaa ttcaggttta tattaaataa tatctatttc
     3181 atctttatca ttatcaatat tcgtattttt acatcttaaa aatattgatg taatatgacc
     3241 ctcgaagatc aattaaattc tgttgttaca caatcggtac aagtatcgcc gattatgaaa
     3301 ataattaaag ttaaacccga aggatggaaa tttccggaat ttgaggccgg tcaatttgtt
     3361 gcacttggtt tacctcctta tgcatctcgt tgtgccgaag ctaccgacga atttgaacca
     3421 ccaaaatccg acaaactaat tagacgtgct tattcaattg cgtcttcatc aactgaagat
     3481 tcaatagagt tttatataac tttagttaat tccgggcaat taacacctag aatttttgag
     3541 ttgtacattg gtgataagat atggttgggt aaagaagctg tgggtatgtt tactcttgat
     3601 caaatagata atgacaaaaa cgtaatatta atagccaccg gtacaggagt ggctccttat
     3661 atgagcatgt tgcgttcgaa tgctttgaaa cgaactggta agatattggt cattcatggt
     3721 gcagctaata gttgggacct tggctattcg tcagaattaa aattactagc aagcatattt
     3781 aacagttttc attatcatcc aacaatcact gaatccaata aagaaccagt gggatggaat
     3841 ggagacacac gttttattga tgaaatatgg aaatcgggca tagctgaaaa tactctaggt
     3901 gttaaaccca caccaaaaaa taccgaagtg ttcttgtgcg gtaatccgaa aatggtagaa
     3961 ggaatgaaag agttgcttta taaagacgga tttaaagacc ataaaaagaa aagcccagga
     4021 gaaatacatg ctgaggaatt ttgattacca attaacttat tcttatttag cttagacagc
     4081 acaattcctt tctacaacac aatatggata acaatgaaat aatttgcaac tgcatgcaaa
     4141 taacaaaagg agagatagtt gcagctatca aatctggtgg tttattaact atcgatgaag
     4201 ttggagatga aacagaagca gggactgttt gtggtagctg tcatgatgat attgaagaaa
     4261 tacttaaaga agttaatgga tagaatattt gaatattgcg tattaatata cttcagagat
     4321 aattacacaa taatttaacc tgaaacccac tttgccgaac caaaccttcc tttccctacc
     4381 tttgtcagca tgatctaccc tgctagctat gagcaaaaaa ttggtttcgg acagataaag
     4441 aaacatatta gtcagttatg tataagtaca attggacaac attttgttga gaagattcat
     4501 ttttcatcca atattgtagc aattaaaaaa ttactggatc aatccagtga gtttgtggat
     4561 ttacttgcaa ttggcaaggc attcccaaca aatgatttta tagatttacg ggaggatatt
     4621 caacaattaa aaacccctgg aagctttatt gagcaggaag tactttttaa cttagttgca
     4681 tcgctattta cactacaaga aatacttaac tactttaatg aaacggataa agaagcattc
     4741 cctgaattaa agaaacttgt tgatctggtt tatttgccag aagaattgct acatgaagcg
     4801 caaaaaataa ttgacaagaa aggtgaaata agagatagcg catctgacaa attgaaaaca
     4861 ataagacaaa gtattaccag taaacaacgg aaagcattta gagaaacaaa gaaggctttt
     4921 gagaaggcaa aaaaatcggg atggataccc gacaatacag agataacaat tcgcaacgga
     4981 cgatctgtaa tccctttgaa agcggccaat aaaagatcaa ttggaggcat tatccatgat
     5041 gagtcatcaa cgggtcaaac tgtttttgtt gaagcttcta tgtcattcga aattaacaat
     5101 gaaattaagg aactggaaag tgaagaacgc agagagatca caaaaatatt gttaagcttc
     5161 actgataatc taaggccaaa catctctgat cttattgatg cctaccgttt ccttggatta
     5221 attgatttta ttcgtgcaaa agcattgttt tcgataaaaa tagcagcaaa acaaccaatt
     5281 attactaaca acaaacctgt aggtattagg gaagcatttc acccactatt gtttctttca
     5341 cataaggaaa aaaagaaaac ggttattcca ctagaccttg cacttactga tgaaaacagg
     5401 atattaataa ta
//
LOCUS       DASCQP010000098         2676 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000439053, whole genome shotgun sequence.
ACCESSION   DASCQP010000098 DASCQP010000000
VERSION     DASCQP010000098.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2676)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2676)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2676
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000439053"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..236)
                     /locus_tag="QF480_01680"
     CDS             complement(<1..236)
                     /locus_tag="QF480_01680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05301.1"
                     /translation="MAYSFLKNNDDPLVNQCSTYIDVIKNRAASNPGHIVFRFLSDGV
                     NKSESLTFLELETRSKALGAAMQNHGSKGDSVLL"
     gene            354..2438
                     /locus_tag="QF480_01685"
     CDS             354..2438
                     /locus_tag="QF480_01685"
                     /inference="COORDINATES: protein motif:HMM:NF019339.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HJN05302.1"
                     /translation="MRKKSRNKNTSALNENKLILIFKIILIALTFTFYYNTIFNHFSL
                     DDHHINSNNPQTVKGIAGIPEIFTTLYNDNDGQTFGYRPIVSTSFALEYQFTANLDSN
                     PYISHFINILLYILAVLVLFKVLRRLFAGYNLWFPFLITVMFLAHPTHTEVVASLKNR
                     DVLFNFIFSFIAIWYFLKWIDKDKVVYLFFGMVSFILALLSKETAIVQLAVFPLVIYF
                     FTDVKLKKLSIFTLAIIGIVILVFITRLMILPDAVRDIRLWENPLIGTDNFMLHISTA
                     FYVLGFYLKMLFIPYPLLYYYGYNMIPIVGWSNPWVLISLIICLALLLFALAKIKEKK
                     ILSFAILYFFINISMYANIVAPVPGIVADRFVFFATISFAIFIVWLFFKVFRIPLLRS
                     EKNKTRMIWVVLSMLLIIVPYGYYVHARNIQWGTQYSLYKADMPKLWNSVKANNLFAH
                     ELMKKANHELSKPVNPYKFIIGLIDNAEKHYKQALNLDSTHASSWNNLGIIYSKIHGN
                     QAKLRVQSHIKFNKPEKAESEKINSQNYFNTAIGYFHKAIYFKPKYGSALFNLANAYE
                     LQNQYDSSIVYFQKAIEADGGKLVSMSRLANAYYLNDQRENAVNQNKKIITAYPKSDM
                     PYINLGNYAYNDKDTVNVLLNYKEAVRLGTNPKVGELLSKYYLSIGDEQNARYYYRKS
                     QEAEQLLKKKKK"
     gene            2443..>2676
                     /locus_tag="QF480_01690"
     CDS             2443..>2676
                     /locus_tag="QF480_01690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP synthase"
                     /protein_id="HJN05303.1"
                     /translation="MQNTIKDISCYFPDKILTNEDLQKEFPGLKLPELTRLTGVTQRH
                     ICAKNKTSVDMSVAAAEKLFRESNIKKSDIDFII"
BASE COUNT          895 a          432 c          433 g          916 t
ORIGIN      
        1 aataataaca cactatcacc tttagaccca tgattctgca ttgcggctcc aagtgccttt
       61 gaccgtgttt cgagttctag aaatgtaagc gattcacttt tattaactcc atctgaaaga
      121 aagcgaaata caatatgacc agggtttgat gctgctctgt tttttataac atcgatatat
      181 gtagaacatt ggtttacaag aggatcatca ttgtttttca aaaaggagta agccataaat
      241 taacttttga agtgcaaaaa tagttttttg gtacaacttc atcatctcgt aattcatttt
      301 atctttgcga aacattaaaa gtgaagaaac acttatactc attttgataa gttatgagaa
      361 aaaaaagtag aaataaaaat acctcagctt taaacgaaaa taagctaata ctcattttta
      421 aaattatttt aatagcgcta acatttacat tctattataa tactattttc aaccatttct
      481 ctctggacga tcatcatatt aatagtaata atccccaaac tgtaaaaggg atagcgggta
      541 tccctgagat ttttactact ttatataatg ataatgatgg tcaaacgttt ggttatcgcc
      601 ctatagttag cacaagcttt gcccttgaat atcagtttac tgccaaccta gattcaaatc
      661 cttacattag tcattttatc aacattctgc tatatatatt agccgtcttg gtacttttca
      721 aagtgttaag gaggttgttt gccggatata atctttggtt tcctttttta attacagtaa
      781 tgtttttggc tcatcctact catactgagg ttgtagctag tctgaaaaac agagacgtgc
      841 tgttcaattt tattttctca ttcattgcca tatggtactt tctgaaatgg atcgataaag
      901 acaaagttgt gtatctcttt ttcggaatgg ttagttttat tttagcatta ctgtcaaaag
      961 aaactgcaat tgtacaactg gctgtttttc cacttgttat ttattttttt actgatgtga
     1021 aattaaagaa acttagcatc ttcactctgg caattattgg gatagtaata ttggttttta
     1081 ttaccagatt aatgattctt cctgatgctg ttagagatat tagattatgg gaaaatccac
     1141 tcataggaac cgacaatttt atgcttcata ttagtactgc attttatgta cttggttttt
     1201 atttaaagat gctttttata ccatatcctt tgctttatta ctatggttac aatatgatac
     1261 caattgttgg gtggagcaat ccttgggttc ttatttctct aattatatgc ttggccttgt
     1321 tgttatttgc attagctaaa attaaagaaa agaagatatt atcatttgcc attctttact
     1381 ttttcattaa catatctatg tatgccaata ttgttgctcc tgtacctggc attgtcgccg
     1441 atagatttgt tttttttgca accatctcat ttgcaatatt tattgtatgg ctattcttta
     1501 aagtctttag gattcctctt ttgaggtcag aaaagaataa aacaagaatg atttgggttg
     1561 ttttatcaat gctattaatt attgtaccgt acggttatta tgttcatgcc cgtaatatac
     1621 agtggggtac acaatacagt ttgtataaag cagatatgcc caaactatgg aattcagtaa
     1681 aagctaataa cctttttgct catgagttga tgaaaaaagc taaccatgaa ctttcaaaac
     1741 ctgttaatcc atataaattt ataattggct tgattgataa tgctgagaaa cattacaaac
     1801 aagcattgaa tctcgactca acacatgctt catcatggaa taacttaggt attatttatt
     1861 caaaaataca tggcaatcag gcaaaactca gagtccaaag tcatattaaa ttcaacaaac
     1921 cggaaaaagc ggaaagtgaa aaaataaact cacaaaatta ttttaatact gccattggtt
     1981 attttcacaa agctatatac tttaagccaa aatatggcag tgcacttttt aacctggcaa
     2041 atgcttatga gttgcaaaac cagtacgatt cttcaatcgt ctattttcaa aaggcaattg
     2101 aagccgatgg tggaaaatta gttagtatgt cacgacttgc caatgcttac tatttaaatg
     2161 accagcgtga gaacgcagtt aaccagaaca aaaagataat tactgcctat cccaaaagcg
     2221 atatgcccta tattaattta ggtaattatg cctataatga taaagatact gtcaatgtac
     2281 tattaaatta caaagaggca gttagattag gaacaaatcc taaagtaggc gaattgttga
     2341 gtaaatatta cttgtcgatt ggtgatgaac aaaatgccag atactactac agaaaatcgc
     2401 aagaggctga acagttgctt aagaaaaaga agaaatgata ttatgcaaaa tacaataaag
     2461 gacataagct gctattttcc agataaaatt cttacgaatg aggatctaca gaaggagttt
     2521 cctggattaa aactaccgga actaaccaga ctaacaggtg ttacgcaacg acatatatgc
     2581 gctaaaaata aaacttctgt tgatatgtct gttgcggcgg ccgaaaaact ttttcgtgaa
     2641 agcaatataa agaaatcaga tattgacttc attata
//
LOCUS       DASCQP010000099         1928 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000444683, whole genome shotgun sequence.
ACCESSION   DASCQP010000099 DASCQP010000000
VERSION     DASCQP010000099.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1928)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1928)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1928
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000444683"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            181..405
                     /locus_tag="QF480_01695"
     CDS             181..405
                     /locus_tag="QF480_01695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05304.1"
                     /translation="MASGALVAGMVAIFTYGLKIAEENFNNKNCDLIALSDYNTMINI
                     AINENYVSQEDELSLLEWRKDPKKWSDKNE"
     gene            499..897
                     /locus_tag="QF480_01700"
     CDS             499..897
                     /locus_tag="QF480_01700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05305.1"
                     /translation="MIIEGKPATINKDIVSVYNFLTDFNNFENLMPDQITNWQSDKNS
                     CSFTIQGMASVKLTFSEKVPHTLIKLVPEGKVPFSFGLIIRLSEQENNTIAKVEVDAQ
                     LNPMMAMMAKRPLENLVNVMAGNINEAIGR"
     gene            complement(918..1661)
                     /locus_tag="QF480_01705"
     CDS             complement(918..1661)
                     /locus_tag="QF480_01705"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR00121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004077 - biotin-[acetyl-CoA-carboxylase]
                     ligase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HJN05306.1"
                     /translation="MQFNIINIPKLKSTNSYAQELIESGDLHEGDVISTQYQKNGRGQ
                     GDNFWESEHGSNLLVSIILEPSMVPAQRQFVLTQIVSLALVDLIKEYILTEEVKIKWP
                     NDIYVNKNKIAGILFQNFVKGNHIEFSIAGIGINVNQKKYYSEVPNPISIIHHSNSPT
                     NLKVLLDKLLDKIGFNYETYRLKENFEELKSKYVINLYRYNEWATYSDGNNPFQGKIF
                     DIDEFGRLEVMMKSGEEKKFMFKEIEFVE"
     gene            1745..>1928
                     /locus_tag="QF480_01710"
     CDS             1745..>1928
                     /locus_tag="QF480_01710"
                     /inference="COORDINATES: protein motif:HMM:NF014464.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0017148 - negative regulation of
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RsfS/YbeB/iojap family protein"
                     /protein_id="HJN05307.1"
                     /translation="MQGKAGKDDAKNILKQVVAAMQDKKAKNIISLDLRNIVDSVSQY
                     FVLCDAQSSTQVDAIYD"
BASE COUNT          667 a          315 c          323 g          623 t
ORIGIN      
        1 ccccaagggg ctttggttgc tgatgagtta ggtttaccgt ttgtttatgt gaggtcgtct
       61 gctaaggctg acggcatgac aaataaaact taaggcaaaa ttgaaaaagt acaaactgta
      121 gttgtagttg aagatcttat ctcaacaggt aagagtagcc tcaatgcggt tgatgcttta
      181 atggcttcag gcgcattagt tgccggaatg gttgcaatct ttacttatgg tcttaaaatt
      241 gcagaagaaa atttcaataa taaaaactgt gatttaatag ctttgtcgga ttataataca
      301 atgattaata tagcgataaa tgagaattat gtttctcaag aagatgagtt gtcgcttttg
      361 gaatggagaa aagatccgaa aaaatggagt gataaaaatg agtaaattat aaaataagaa
      421 atcaccttat ggaaataata aacatttaag cattttcgca ttaagcaatt aaacattaac
      481 tcattaaagc ataacaaaat gataattgaa ggaaaacctg ccaccataaa taaagacatc
      541 gttagtgttt acaatttctt aaccgatttc aataactttg aaaacctgat gcctgatcaa
      601 attaccaatt ggcaatctga taagaactca tgctcgttta ctatacaggg aatggccagt
      661 gttaagttaa cgttttctga aaaagtaccc catactctta taaagttagt accggaagga
      721 aaagtacctt tcagttttgg acttattatc agattatctg aacaagagaa taacacaata
      781 gccaaagttg aagttgatgc tcaactaaac ccaatgatgg caatgatggc aaaacgtcct
      841 cttgagaatc ttgttaatgt aatggctgga aatataaatg aagcgattgg caggtaataa
      901 caacgttatg acataaatta ttcaacaaac tcaatttcct taaacataaa tttcttttcc
      961 tcgccacttt tcatcattac ttcaagtctg ccaaattcat caatatcaaa aatttttccc
     1021 tgaaaagggt tgttgccatc tgagtaagtt gcccactcat tatatctata tagattaata
     1081 acgtactttg atttgagctc ttcaaaattt tcctttaacc tgtatgtttc atagttaaaa
     1141 ccaattttat caagaagctt gtccaacaag acttttaaat tagttggact atttgaatga
     1201 tggataattg aaataggatt tggcacctct gaatagtact tcttctgatt aacatttatc
     1261 ccgataccag caattgaaaa ctcaatatga tttcccttta cgaagttttg gaatagtatt
     1321 ccggcaatct tattcttgtt tacataaata tcatttggcc attttatttt aacttcctca
     1381 gttaagatat attctttgat taaatcaacc aaggcaaggg aaacaatttg agtaagcaca
     1441 aattgtcgct gagcaggaac catactaggc tcaagtataa tactcaccaa gaggttgcta
     1501 ccatgctcgc tttcccaaaa attatctcct tgtcctctgc catttttttg gtactgagta
     1561 gaaataacat caccttcatg caaatcacca ctttcaatca actcttgagc ataactgtta
     1621 gttgatttaa gcttagggat attaataata ttaaattgca ttagttgtat tggtagatat
     1681 gcaaaaatag cacattaaac caactactat tttagtactt ttgtaactta attgtaattg
     1741 atacatgcag ggtaaagctg gtaaagatga cgccaaaaat attctaaagc aggttgttgc
     1801 tgcaatgcag gataaaaagg caaagaatat tatcagtctt gatttacgaa atattgttga
     1861 ctcagtttca caatattttg tgttatgtga tgcacaatca agcacacaag ttgatgccat
     1921 ttatgata
//
LOCUS       DASCQP010000100         2671 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000445494, whole genome shotgun sequence.
ACCESSION   DASCQP010000100 DASCQP010000000
VERSION     DASCQP010000100.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2671)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2671)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2671
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000445494"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(102..233)
                     /locus_tag="QF480_01715"
     CDS             complement(102..233)
                     /locus_tag="QF480_01715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05308.1"
                     /translation="MIKSKKELLDMLQRREITLAEFKDRMMVYTDTLQYFVKLKTWT"
     gene            complement(226..447)
                     /locus_tag="QF480_01720"
     CDS             complement(226..447)
                     /locus_tag="QF480_01720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05309.1"
                     /translation="MKRQLLNELVNNNITVDDFRHSLKDKVGLMAIDIGAGKVSVKGG
                     SQKLNEVMTMEEFYKLSSQHQISILITND"
     gene            complement(428..736)
                     /locus_tag="QF480_01725"
     CDS             complement(428..736)
                     /locus_tag="QF480_01725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05310.1"
                     /translation="MFKPGESGNKEGRKKGSLNKKTILWNSLSTKFVDVHSNRIDEHL
                     DELWATNKTKFVELYVSLIGYHRPKLKATELKTNIDSLSDQQVDTIVNKILDNEKTAT
                     "
     gene            complement(729..911)
                     /locus_tag="QF480_01730"
     CDS             complement(729..911)
                     /locus_tag="QF480_01730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05311.1"
                     /translation="MKHKSSKYFRNNKLINRKLQEHPAKAVDEKQAYMEFLDSVYATT
                     NKNVEEIVKQQIKNNV"
     gene            complement(901..1551)
                     /locus_tag="QF480_01735"
     CDS             complement(901..1551)
                     /locus_tag="QF480_01735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05312.1"
                     /translation="MSKKLRIRVGIDEPILRKLKSELPKQLAPFNKLRGVLKSAMQTD
                     KINGDYKIAYREFCDQLLDGFPADCSLNFCSQAKGKHDEFKRSVDLYEQCKELDQEYI
                     KYLRLKDGNYIFDTDIDKYLESLSELTIEGNTAIKLYSKVCELLNVFIFLDTLADNRV
                     LKQPADLQKASGLVYHAPDMTLKPNHISIQAVADQLDNGRLNDEEQKAYKELLNEA"
     gene            complement(1544..1762)
                     /locus_tag="QF480_01740"
     CDS             complement(1544..1762)
                     /locus_tag="QF480_01740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05313.1"
                     /translation="MKKKKLISLDDYLSNISRMASELKCEVQYLRRYKDIIRNYKPEQ
                     FESRLHLKLSLEGLQKSIINTLTDLNNE"
     gene            complement(1762..2025)
                     /locus_tag="QF480_01745"
     CDS             complement(1762..2025)
                     /locus_tag="QF480_01745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05314.1"
                     /translation="MKSNAEVLRSLIRKRYGEVADKSKMKLAKDERITPGKSMLFKLV
                     QMRQIAKVNSGGKLTRLMKFRRLTKDHSIKGTYILADGSKVVI"
BASE COUNT          747 a          473 c          393 g         1058 t
ORIGIN      
        1 catgctttta tacttctgtc tttccgttat ttacaaaact attattactg tctgtataat
       61 ggtatatact attaaaacta ttgcaactac tctaaataat ttcatgtcca ggtctttagt
      121 tttacgaaat actgtaacgt gtcggtatat accatcatcc tatctttaaa ttctgctaac
      181 gtgatctccc tgcgctgtag catatccaat aattcttttt tgcttttaat catttgtgat
      241 caatattgag atttggtgtt ggctgcttag tttgtaaaac tcttccattg tcataacttc
      301 attcagcttt tgtgatccac ccttaacaga tacttttcct gcacctatgt cgatagccat
      361 taaaccgact ttatctttaa gactatgccg aaaatcatca acggtaatat tgttatttac
      421 aagttcatta agtagctgtc ttttcattat ctaatatctt gtttacaatg gtatcgactt
      481 gttgatcgga taaactgtca atattagttt tcaattctgt agcttttaac tttggtctgt
      541 gataaccaat taatgacacg tacaattcta caaactttgt cttattggtt gcccaaagtt
      601 cgtccaggtg ttcatctatt ctattgctgt gaacatcaac aaactttgta gataaactat
      661 tccaaaggat tgtcttttta tttagtgatc ctttttttct tccttcctta tttccacttt
      721 ctccaggttt aaacattgtt ttttatttgt tgttttacaa tttcttctac attcttatta
      781 gtggttgcat atacactatc taaaaattcc atgtatgctt gtttttcatc aactgcctta
      841 gctggatgtt cctggagctt cctattgatt agcttgttat tcctaaaata cttacttgat
      901 ttatgcttca tttaacagtt ctttatatgc tttctgttct tcatcattta acctgccatt
      961 gtccaactga tctgctaccg cttgtatgct aatatggtta ggttttaaag tcatatcagg
     1021 tgcatggtac actaatcctg atgctttttg caggtctgct ggttgtttca aaactctgtt
     1081 atctgctaac gtgtccagga atataaatac attaagtaat tcacatacct ttgagtaaag
     1141 cttaatagcc gtattacctt caatagtcag ctctgacaga ctttctaagt acttgtctat
     1201 gtcagtatca aaaatgtaat taccatcctt taaacgcaag tattttatgt attcctggtc
     1261 aagttctttg cattgttcgt acaggtcaac tgacctttta aattcatcat gcttgccctt
     1321 cgcctgacta cagaaattca aactgcagtc agcaggaaaa ccgtctaaca actgatcgca
     1381 aaattctcga tatgctattt tgtaatcacc attgatttta tcggtttgca ttgcactctt
     1441 aagcactcca cgcaatttat tgaatggtgc taactgcttt ggcagttcag actttaactt
     1501 tcttaaaata ggttcgtcta tgcctactct aatccgtagt ttcttactca ttgtttaaat
     1561 ctgttaaagt gttaatgatt gatttctgta atccctctaa tgatagttta agatgcaatc
     1621 tggattcaaa ttgctcaggt ttataattcc tgataatgtc tttataacgt cttagatatt
     1681 gaacttcaca ttttagttct gatgccattc ttgaaatatt actaaggtag tcatcaagtg
     1741 aaatgagttt ttttttcttc atcagataac aactttggag ccatcagcta agatgtaagt
     1801 acctttgata ctgtgatctt ttgttaacct tctaaacttc attaagcgag taagtttgcc
     1861 ccctgaattt acctttgcta tctgacgcat ttgcaccaat ttaaataaca tagattttcc
     1921 tggtgtgata cgttcatcct ttgccaactt catttttgat ttgtcagcta cttcgccata
     1981 tcttttgcga attaatgagc gtagtacttc agcgtttgac ttcattccag atttgagttt
     2041 aatcgcttct aataaattgc gatcggtctg gcttaactgt agactggttt gttttaccat
     2101 gatataaata tttgtttcta tactaatata acgctttagg tacaatagtg tttttgcttt
     2161 ttgtacatct acaataaaaa aaacctctgt agtgtactat ttacaaaggt ttaacaataa
     2221 aataaattat tcattttttt aggtttggtt tgtacattcg ttaacaaatg ttaaccaatg
     2281 tttaccaacg tggctcgaat ggtgtaaatc tgttggttgg tcattatgtt aaatagcaat
     2341 ttcctgcaac cagatgctaa atatcatact gttttggtta acaaatggct taacaaatga
     2401 aatactgcaa cttgcttgta ttgttctgtt atctatttta tttacagtat gttatgatcg
     2461 taattctcat atgctaattt catatgttag gttaacaaat ggattggttt gttagttaaa
     2521 aaatgagtta acaaatgaat tgaaagttat tggaaatttg gacaattgtc ccaaattcca
     2581 aaaagattta gcaaacttcg aggactcaaa ttttgagaag cctattttat tatattagaa
     2641 tttattatta tatttacgaa ataatttaaa a
//
LOCUS       DASCQP010000101         2169 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000452289, whole genome shotgun sequence.
ACCESSION   DASCQP010000101 DASCQP010000000
VERSION     DASCQP010000101.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2169)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2169)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2169
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000452289"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            230..367
                     /locus_tag="QF480_01750"
     CDS             230..367
                     /locus_tag="QF480_01750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05315.1"
                     /translation="MDEAIINKYNVQQRKSEEEKKTDDVDKSNMKKRRGRKENRKVSK
                     Q"
     gene            414..1769
                     /locus_tag="QF480_01755"
     CDS             414..1769
                     /locus_tag="QF480_01755"
                     /inference="COORDINATES: protein motif:HMM:NF024116.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJN05316.1"
                     /translation="MERYFLILSISLEAVFTNKVRSVLTALGIIFGVAAVIAMLAIGN
                     GAQQEILEQIKLVGLNNIIITPKDTSTGEDEAAEEEDETKALSKKFSPGLTLKDAENI
                     MATLPTVEKVSPEIVYSTPSMREGKYLKVNLSGVTSDYFTLFNQELKKGTVFNAKQME
                     LGAPVCVIGTEVVAKLFPKEDPIGKQLKCGTIWLKVIGVLKGVTVSEKAEEIGVSGYS
                     RNVYVPIKTILLRYKDRSLIAQSGLAGGSAIFFSGNNVMITSSVGDAGKGENQLNKIV
                     VQVKKSSQLSSTTSAIEQILKRRHHDVDDFEITIPELLLKQEQKTKDIFNIVLGAIAG
                     ISLIVGGIGIMNIMLASVMERIREIGVRRAIGATKKDIVFQFLSEATLISITGGLIGI
                     LVGVIMAKIITATTDILTIVSFASIMLSFGVAASVGIMFGWLPAKKAAEQDPVESLRH
                     D"
     gene            complement(1796..>2169)
                     /locus_tag="QF480_01760"
     CDS             complement(1796..>2169)
                     /locus_tag="QF480_01760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05317.1"
                     /translation="STISTISYIATNMIEEKIQYDRIFVQSNIVDYTYNSSTEKYRIT
                     VFNNFSSDIEIFEGNFTDSTFVVENTFISYGDSTQNNNPFQVVFSDIEKDSFIVGVNY
                     SRDKGATWNPRDKFTYTRGKD"
BASE COUNT          753 a          313 c          439 g          664 t
ORIGIN      
        1 cacaaaaaac agtattatta ctgcggtaat tgattctgta ctttttgtgc caattgagag
       61 tgttaatgtt ctcgatacaa taaattttgt gtatacttca tagcagagga agcaagtaat
      121 acctggtaaa acaaacgaaa caagtattat tatacacgta ggattagaag aaggtgatga
      181 ggtttatatc attccacctg aaggagcaga tgaatggagt cttgagctat tggatgaagc
      241 aattattaat aagtataatg ttcagcagag aaaaagcgaa gaagagaaaa agactgatga
      301 tgttgacaaa tcaaatatga agaaaagaag aggtcgcaaa gaaaatcgta aggtgtctaa
      361 acaataatta attctaacaa gcaaatataa attattcaat ttaatcaaac actttggaac
      421 gatatttctt aatactatct atttctctcg aagctgtatt tactaataaa gtcagatcag
      481 tattaactgc ccttggaatt atttttggag ttgcagctgt tatagcgatg ctggctattg
      541 gaaatggtgc ccagcaggaa atccttgaac agataaagct tgtaggtcta aacaatataa
      601 taatcacacc gaaagataca agtacagggg aagatgaagc cgctgaggaa gaggatgaaa
      661 ctaaagcctt gagcaaaaaa ttctccccag gacttacttt aaaagatgcc gagaatatta
      721 tggcaacatt accaactgtt gaaaaggtaa gccccgagat agtttattca acaccatcaa
      781 tgcgtgaggg aaaatattta aaagtaaacc ttagcggtgt cacttctgat tattttacat
      841 tgtttaatca ggagttgaaa aagggaacag ttttcaatgc aaagcagatg gaactaggcg
      901 cacctgtttg tgtaattggt actgaagtgg tggcaaagct ttttccaaag gaagatccaa
      961 taggaaagca attgaagtgt ggtacaattt ggttaaaggt gattggcgta ttaaaggggg
     1021 ttacagttag tgaaaaagca gaagaaatag gggtaagtgg atatagtaga aatgtttacg
     1081 tgcctattaa aacaatctta ctcagatata aggatcgctc tctgatagct caatcaggat
     1141 tagcaggtgg ttctgcaata ttcttttctg gaaacaatgt tatgattact tcatcagtag
     1201 gtgatgctgg taagggagaa aaccagttaa ataaaattgt tgtacaggtt aaaaaaagta
     1261 gtcagttatc atcaacaact tcagctattg agcaaatact aaaacgtaga caccatgatg
     1321 ttgatgattt tgagattact atacctgagt tattgctaaa gcaagaacaa aaaactaaag
     1381 atattttcaa tatagttcta ggagcaatag ctggtatttc cttaattgtt ggtggcattg
     1441 ggataatgaa tattatgttg gcatctgtta tggaaaggat tcgtgagatt ggagtgagaa
     1501 gggctatcgg tgcaacaaaa aaagatattg tctttcaatt tctgtccgag gcaactttga
     1561 taagtattac aggaggatta attggaatat tggttggagt gatcatggcg aaaatcatta
     1621 cggccactac agatattctt acaatagtgt catttgcctc tataatgtta tcctttggtg
     1681 tagcagcatc agtagggatt atgtttggct ggctgcctgc aaaaaaagct gctgaacaag
     1741 atcctgtaga atcactaagg cacgattaaa tttttaacga aactaaattt gatctttaat
     1801 cttttcctcg ggtatatgta aatttatccc ttggattcca ggttgctcct ttgtcgcggg
     1861 aataatttac cccaacaata aaactgtctt tttcaatatc gctaaatacg acctgaaaag
     1921 gattattatt ttgcgttgaa tctccgtaac taatgaaagt attttccacg acaaatgtgc
     1981 tgtcagtaaa gttaccttca aaaatttcta tatctgatga aaaattatta aacacagtta
     2041 tcctatattt ttctgtcgaa gagttatatg tgtaatctac aatatttgac tgaacaaaaa
     2101 ttctatcgta ctgtattttt tcttctatca tattagttgc tatgtagcta atagtagaga
     2161 tagtactat
//
LOCUS       DASCQP010000102         1844 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000453918, whole genome shotgun sequence.
ACCESSION   DASCQP010000102 DASCQP010000000
VERSION     DASCQP010000102.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1844)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1844)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1844
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000453918"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(133..399)
                     /locus_tag="QF480_01765"
     CDS             complement(133..399)
                     /locus_tag="QF480_01765"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HJN05318.1"
                     /translation="MQLNQIEHSHTLSEWVQQYNQEMCNWATHKVSDSELAKDLVQDT
                     FLAASEKISSFKGESSPKTWLFSILKYKIIDHYRAKVKQPISYV"
     gene            complement(564..>1844)
                     /locus_tag="QF480_01770"
     CDS             complement(564..>1844)
                     /locus_tag="QF480_01770"
                     /inference="COORDINATES: protein motif:HMM:NF021942.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008239 - dipeptidyl-peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0070009 - serine-type aminopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S46 family peptidase"
                     /protein_id="HJN05319.1"
                     /translation="RLQYASKFAGTANYWKYFIGQTKGLKRLKVKEKKQKEEDEFQNW
                     IDQNPKAKMKYGEALVLIGDAYDVKGQYDIANVYFREAVYRGAEILGYAYRFSSLSKL
                     LNDKESTDSAINIAINRLKARVDGQFKNYNEAIDRNLFASMMEMYHKNVPLDQQPPYL
                     LKMVKKFKGNYNKYADYMYGKSIFASKEKVEAFLNAPNKKKLSKDPAMIAVKAFSVSY
                     RAMQSNLKEANEKLAKGHRLYIAGVREMNPDNNYAPDANFTMRLSYGSVQDYYPADAI
                     HYEYFTTMDGIMQKEDPDNWEFIVPAKLKELYQEKDFGQYGKEGVMNVCFLTNHDITG
                     GNSGSPVINANGELIGLAFDGNWEAMSGDIAFEPELQRTINVDIRYVMFIIDKFAGAN
                     NLIEEMTIVTEKPVEEPVTEVETVEAPASVEVVE"
BASE COUNT          548 a          361 c          281 g          654 t
ORIGIN      
        1 acgcttaatc tctcttactt ttgatttgac actttgtttt ttagttgcca taacttgaat
       61 ttttattggt tataaattta tgaattctgt ccataaagat ttaaaccaat ctgtccaaat
      121 tagggtgaag acttacacat agctgattgg ttgtttcacc ttagcacgat aatgatcaat
      181 aattttatac ttaaggattg agaacaacca tgttttagga gaactttctc ctttaaagga
      241 tgaaattttc tcggatgctg ccaaaaaagt atcctgcact aaatcttttg ccaattcgga
      301 atcagatact ttgtgggttg cccagttaca catttcctga ttgtattgct gaacccattc
      361 tgaaagtgta tgtgaatgct ctatttgatt tagctgcaaa ttgttccttt gtgtaaaagt
      421 aagaataaat attataaagc ttatagtgat attattaata tagtaacgag aagtcaaaaa
      481 aataccccaa ggaatttcct cagggtatta ttatattctc aaattattcc caacaatgaa
      541 tgtttggaaa ttaatttgtt ctattattca acaacttcaa cacttgcagg agcttcaaca
      601 gtttcaactt cagtaacagg ttcttcaaca ggcttttcag ttacaattgt catttcttca
      661 attaagttgt ttgctccggc aaacttatca ataataaaca tcacatagcg aatatctaca
      721 ttgatagtac gttgtagttc cggctcaaag gcaatatcgc cactcatggc ttcccagttg
      781 ccgtcgaatg caagtccaat tagttcccca tttgcattta taaccgggct acctgaatta
      841 cctccggtaa tatcatgatt cgtaaggaag caaacattca taactccttc cttaccatac
      901 tggccaaaat ctttttcctg atataattcc ttaagctttg ccggaacaat aaactcccaa
      961 ttatcaggat cttctttttg cattatacca tccatagttg taaaatattc ataatgaata
     1021 gcatccgcag gataataatc ctgcaccgag ccataggata atcgcattgt aaagtttgca
     1081 tcgggtgcat agttattatc aggattcatt tcacgtacac cagcaatgta taaacggtgt
     1141 cctttggcaa gcttttcgtt agcctctttc aaattactct gcatcgcacg atatgacacg
     1201 gaaaatgctt taacagctat cattgcagga tcctttgaaa gtttcttttt atttggagca
     1261 ttcagaaatg cttcaacttt ctctttactt gcaaatattg atttgccata catatagtca
     1321 gcatatttat tatagttacc cttaaatttc ttgaccattt ttaataaata tggaggttgc
     1381 tgatcaaggg gaacattttt gtgatacatt tccatcatag aagcaaaaag gtttctatcg
     1441 attgcctcgt tgtaattttt aaactggcca tcaactctgg cttttagtcg gttaatagca
     1501 atatttattg ctgaatccgt tgattcttta tcgttcaata atttgcttaa actactgaac
     1561 ctataagcat agcccaatat ttcagcacca cggtaaacag cttcacgaaa ataaacatta
     1621 gctatatcgt attgcccttt tacgtcataa gcatcaccaa ttagtacaag agcttctcca
     1681 tatttcattt tggctttagg gttttgatca atccaattct ggaattcatc ctcttctttt
     1741 tgttttttct ccttcacttt caatcgcttt aacccttttg tttgccctat gaaatatttc
     1801 cagtaattag cagtacctgc aaacttggaa gcgtattgaa gacg
//
LOCUS       DASCQP010000103         1511 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000453946, whole genome shotgun sequence.
ACCESSION   DASCQP010000103 DASCQP010000000
VERSION     DASCQP010000103.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1511)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1511)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1511
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000453946"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..251
                     /gene="rsfS"
                     /locus_tag="QF480_01775"
     CDS             <1..251
                     /gene="rsfS"
                     /locus_tag="QF480_01775"
                     /inference="COORDINATES: protein motif:HMM:TIGR00090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0017148 - negative regulation of
                     translation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HJN05320.1"
                     /translation="YFVLCDAQSSTQVDAIYDNVLEIVQKNCYIKPSHREGYENSEWI
                     LIDYFDVVVHVFREDIRNFYKLEELWGDAVLKRYESDD"
     gene            402..1511
                     /locus_tag="QF480_01780"
                     /pseudo
     CDS             402..1511
                     /locus_tag="QF480_01780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018336842.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
BASE COUNT          520 a          226 c          331 g          434 t
ORIGIN      
        1 aatattttgt gttatgtgat gcacaatcaa gcacacaagt tgatgccatt tatgataacg
       61 tgttggaaat tgtgcaaaaa aactgttata tcaaaccgtc tcatcgagaa ggttatgaaa
      121 attcggaatg gattttgata gactatttcg atgttgtagt acatgtgttt cgcgaggaca
      181 tcagaaactt ttataagtta gaagaactct ggggtgacgc tgtattgaag agatatgaga
      241 gtgatgacta agtccttaca aatttaattt acgacagaat ggcagagaaa gataataaag
      301 atataaaaaa gaaacaaagt tccggaacaa atccttttag caaattaaca ggtcctggaa
      361 aggatgggaa atcaaagttt aatttttatt ggatttatgg tattcttata gtaatcctac
      421 taggagttca gtttattgga tttaatgacg atggtgaaca aaccaattgg cgcgatttaa
      481 agcttatgct cgaaaatgat gatgtgtcga aaataatatt ggtaaacaag gaaaccgctg
      541 aaatatatat taagcccgac aagttatcta aagaaataca taaagatgtt gagggaaaat
      601 cgggccttaa caaaaacaat ccacattatt attatccagt tggatcggtg gataaatttt
      661 atgacaatgt tgaggccgtt caaaaagata caactgatcc tgtttacgtt gaaaacgaga
      721 ccaggcacaa ttggggtggt gaaataataa gctggatttt tcctattgct ttacttgttg
      781 gcgtttggtt cttttttatg agaatgatga gtaaaggtgg tggcggtgcc ggtggtcaga
      841 tatttaatat cggtaaatcc aaagcccaga tttatgataa aaaaacaagc gtgaacatct
      901 catttaagga tgttgcagga cttgaagaag caaaggttga agttactgaa atagtagact
      961 tcctgaaaaa gcctgagaaa tacacaaaac taggtggcaa aattcctagg ggtgtgttac
     1021 tagttggtcc tcctggaaca ggcaaaacgc ttttagcgaa atctgtagct ggagaagcag
     1081 atgttccatt tttctcaatc tcaggttctg attttgtgga aatgttcgta ggtgtgggag
     1141 cctctcgtgt acgcgattta tttaaacaag caaaggaaaa agcacccagt attattttta
     1201 ttgatgaaat tgatgccatc ggtcgagcca gaggtaaaaa ccaaattaca ggagctaatg
     1261 acgaacgcga aaacacactt aatcagctgc ttactgaaat ggatggattc tctccaaact
     1321 cgggagtaat tatacttgca gccacaaaca gagcagatat acttgataaa gcactcatga
     1381 gagctggtag gtttgataga caaatacatg ttgaacttcc tgaccttgaa gaaagaaagc
     1441 aaattttcga tgtgcatatg aaaccactaa agcttttcac gaaatgttga taatggtttc
     1501 cttgcaagac a
//
LOCUS       DASCQP010000104         2959 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000455397, whole genome shotgun sequence.
ACCESSION   DASCQP010000104 DASCQP010000000
VERSION     DASCQP010000104.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2959)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2959)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2959
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000455397"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            24..122
                     /locus_tag="QF480_01785"
                     /pseudo
     CDS             24..122
                     /locus_tag="QF480_01785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013444224.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
     gene            complement(200..553)
                     /gene="rplS"
                     /locus_tag="QF480_01790"
     CDS             complement(200..553)
                     /gene="rplS"
                     /locus_tag="QF480_01790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009597593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HJN05321.1"
                     /translation="MSKNELIEFVDDTVKVNKFPKFKAGDTITITYKIKEGNKERLQK
                     YQGVVLQRVGSGPSATFTVRKISGNIGVERIFPVASPFIEEIVVNKVGVVRRARIFYF
                     RNLRGKKARIKEARR"
     gene            819..1112
                     /locus_tag="QF480_01795"
     CDS             819..1112
                     /locus_tag="QF480_01795"
                     /inference="COORDINATES: protein motif:HMM:NF019491.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Dabb family protein"
                     /protein_id="HJN05322.1"
                     /translation="MLRHIVMIKLKDHVDVRLVSDEFKVLLEALEQSIDSLLKIEVGL
                     NISTKASAQDIVLIADFDNVDGLNMYRVHPEHVVVLDYLKEVMEKAAVVDYII"
     gene            complement(1105..1899)
                     /gene="cdaA"
                     /locus_tag="QF480_01800"
     CDS             complement(1105..1899)
                     /gene="cdaA"
                     /locus_tag="QF480_01800"
                     /EC_number="2.7.7.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013445431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004016 - adenylate cyclase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diadenylate cyclase CdaA"
                     /protein_id="HJN05323.1"
                     /translation="MNLLFIDIRFLDLVDVLLVAVLLYTLFKMLKGTVAINIFFGIVA
                     LFLIWKLVAALQMELLSEILGAFISVGLVALIIIFQPEIRQFLLALGTPNFLKKYGKK
                     FKILNTVFRDVFDFDIFPVVVACQHMAEQKTGALLVITRQNELNQYVKTGQLIDAGIS
                     SQLIENIFFKNSPLHDGAMIITGNKIRAAGCILPVTKKQITARTGLRHRAAIGISEVS
                     DCIAIVVSEETGKISYSIKGQIKYRISPQRLQSMLSEELGLDVETK"
     gene            2098..2499
                     /locus_tag="QF480_01805"
     CDS             2098..2499
                     /locus_tag="QF480_01805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05324.1"
                     /translation="MKNQISLNVQCPHCLSSLMDTENEIQGYPSIKLNINTLEDKGII
                     RICSVYECFDHEANIDIRDKTIVDFYCPSCNKELLVKEECKICGGPMVSFDMLVGGRV
                     NICSRKGCSNHYVAFSDLSDELARFYDEYGD"
     gene            complement(2532..2819)
                     /locus_tag="QF480_01810"
     CDS             complement(2532..2819)
                     /locus_tag="QF480_01810"
                     /inference="COORDINATES: protein motif:HMM:NF014788.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AIR synthase-related protein"
                     /protein_id="HJN05325.1"
                     /translation="MDEDKLVIHENVRGLCELLGFDPLYVANEGKVVMVVGHEDAQSI
                     LDKMKENPLGKEASIIGEISEDHKGMAWLNTAVGGKRVIEMLSGQQLPRIC"
BASE COUNT          974 a          486 c          492 g         1007 t
ORIGIN      
        1 atttaaagcg ctctgatatg taaattatga ttcctatgct tggtaataca gcttcgttaa
       61 atgtgtcagt agcagcaggt gtactacttt atgaggctgt aaaacaaaga agtttatcgt
      121 aggatagtta tttagaacat aaaaaaaact ccgataatta ttgtcggagt tttttgttat
      181 ggcttctatt tgatataaac tatcttctag cttctttaat tctggctttt ttaccacgga
      241 gattacggaa ataaaaaatt ctggctctgc gaacaacgcc aactttattc acaacaattt
      301 cttcaataaa tggtgatgca acagggaaaa tcctttctac acctatgttg ccagaaatct
      361 ttcttactgt aaatgtggca cttgggccac taccaacacg ctgaagtaca acaccttgat
      421 acttctgtaa acgttcttta tttccttctt ttatcttata agttatagtt attgtatccc
      481 cagctttaaa ctttggaaac ttatttactt taactgtgtc gtctacaaat tctattaatt
      541 cgttcttgct catcgattta agtttttatg agtggttttc tcaaaaaagt gtgcaaatat
      601 acagcaattt attcaacgac aatttttttc tgaataataa tttcttcttt tattaaatct
      661 attttgttag taaatataag agctgttaat tatttactta attttttatt gtgcaataaa
      721 tagtgccgaa tgtttgtaat tattagtgac ttaattagtt gatggttgtt gactaacttt
      781 aattcatgta attttacatt ttcacaaata aaattgcgat gttacgacat atagtaatga
      841 taaaacttaa agatcatgtt gatgtcaggt tagtttctga tgaatttaag gtgttattag
      901 aagccctgga acaatctata gattcgctac taaagataga ggttgggctc aatataagta
      961 caaaagcgtc ggcccaggat attgtgttaa ttgccgattt tgacaatgtt gacggtctta
     1021 acatgtatcg tgtacaccct gaacatgttg ttgtgcttga ttatttaaag gaagtaatgg
     1081 aaaaagctgc tgtagttgat tatattattt agtctctacg tcaagtccta attcttcgct
     1141 aagcatcgac tgaagtcttt gaggcgaaat ccggtattta atctgcccct taatgctgta
     1201 tgaaatttta ccagtttctt ccgaaactac aatagcaatg caatcagaaa cttcactaat
     1261 gccaatagca gccctgtgtc gtaaaccagt gcgagcagta atttgttttt tagttacagg
     1321 taatatgcat ccggctgccc ttattttatt gcccgtaata atcatcgctc catcatggag
     1381 agggctattt ttaaagaaga tattttctat tagctgcgaa gaaatgcctg catcaattag
     1441 ttgacctgtt ttaacatatt gattaagttc attttggcgg gtaataacca agagtgcacc
     1501 agttttctgt tcagccatat gctgacaagc tactacgact gggaaaatgt caaaatcaaa
     1561 cacgtctctg aaaactgtat ttaatatttt aaattttttc ccatattttt ttaaaaagtt
     1621 aggtgtccct aaagccaata gaaattgtcg tatctcgggc tgaaaaatga ttattagtgc
     1681 aactaaacca acgcttataa aagcacctaa aatctcagac aaaagttcca tttgaagtgc
     1741 agcaactagt ttccaaataa ggaatagagc aacaatcccg aaaaagatat taattgcgac
     1801 tgtacctttc agcattttga agagtgtgta aagaagtact gctactaata atacatctac
     1861 aaggtctaag aaacgaatat caataaatag aaggttcaat ggtattgatt ttgttcaaaa
     1921 ataaacaata taccaaaaca ggtgaaaact caattaaatt attatttaaa aatcaaaact
     1981 tttaaaatga atattaataa taatcgacta ttcgaataga taataagtac cgtattgatg
     2041 tagacaaaat atttttccta atttagcact aactataact caagaaactg taagaaaatg
     2101 aagaaccaaa tttcccttaa tgttcaatgt ccacattgtt tgtcttcttt aatggacacg
     2161 gaaaatgaaa tacagggata cccttctatt aagctaaata taaatacact tgaggataaa
     2221 gggataattc gcatatgctc ggtttatgag tgctttgacc atgaagcaaa tattgatatt
     2281 agggacaaaa ctatcgtgga tttttattgt ccaagttgta ataaagaact actggtaaaa
     2341 gaagagtgta aaatttgtgg cggtccaatg gtgtcatttg atatgctagt aggaggaagg
     2401 gtaaacattt gttccagaaa aggttgttca aaccattatg ttgcattcag tgatctgtca
     2461 gatgaacttg ccagatttta tgacgaatat ggagactagt gtagcataat taaggtacat
     2521 ctaattttcc cttagcaaat tctgggtaat tgctgaccag agagcatttc aattactctt
     2581 ttaccaccta cagctgtgtt taaccaagcc attcctttat ggtcttcact gatctcacca
     2641 ataatagaag cctcttttcc aaggggattt tctttcattt tatcgagaat actttgtgca
     2701 tcttcatggc ccactaccat aactacttta ccttcgttgg caacatataa tggatcgaat
     2761 ccaagtaatt cacataaccc tctgacgttt tcgtgtatta caagtttgtc ctcatctatt
     2821 tgtgtaagtc ttcaccctaa tttggacaga ttggtttaaa tctttatgga cagaattcat
     2881 aaatttataa ccaataaaaa ttcaagttat ggcaactaaa aaacaaagtg tcaaatcaaa
     2941 agtaagagag attaagcgt
//
LOCUS       DASCQP010000105         1704 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000462668, whole genome shotgun sequence.
ACCESSION   DASCQP010000105 DASCQP010000000
VERSION     DASCQP010000105.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1704)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1704)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1704
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000462668"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..471)
                     /locus_tag="QF480_01815"
     CDS             complement(<1..471)
                     /locus_tag="QF480_01815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05326.1"
                     /translation="MKNRFLLLVLLILVHAFAISQISTKGIPDSFHSSLNGEIPSIEI
                     PNILPQVLLNENKTPARAGYTLPFPYNLSNKGNWLEADNGYVWQLEIVVPHAVAVNLY
                     FNNINLGDGEKLYLYNPKKELVLGAFTKNNNNLYMCTDFIPRDTIIIELNAQKRH"
     gene            complement(505..>1704)
                     /locus_tag="QF480_01820"
     CDS             complement(505..>1704)
                     /locus_tag="QF480_01820"
                     /inference="COORDINATES: protein motif:HMM:NF040138.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PKD domain-containing protein"
                     /protein_id="HJN05327.1"
                     /translation="TSNSCTNPSPAYYGKIWYSWDHNGNTAATRLQDWLDPGNTGMEK
                     LPGVSWQIIPPIADYIADNTEITQGDTVFFTDLSEPGVYEWDWTFESGNPGTSTEENP
                     WVVYPDTGYMDVSLTVTNADGTDTEIKPDYIHVNAMALPTADFEADATHVLPGTSVHF
                     TDLSTGDPYEWAWTFEEGSPGTSSQQNPTIRFNNEGVFTVTLIATNLGGSDTLVKEDY
                     IIVGGSAPVADFTADNTHIMQDETVNFSDLSTGNPIEWAWEFEGGTPGISTEQNPENI
                     LYTVGGAYNVSLNVTNAVGSDLKLMEDYILVDWVGIEDFDGPDDFRIYPNPGTGIFIL
                     QFASTDNKEVKINVSDVEGNIISNKKLIRDKNTYVLDLKLQPDGLYLVNIINGDNHVV
                     KTLSIIR"
BASE COUNT          536 a          323 c          275 g          570 t
ORIGIN      
        1 gtgtcgtttt tgagcattta actcaattat tattgtatct ctcggaatga aatctgtaca
       61 catatacaaa ttgttgttgt tttttgtaaa tgcacctagt actaattctt tttttgggtt
      121 gtacagataa agcttttcac catcacccaa atttatatta ttaaaatata agttcacagc
      181 aacagcatga ggaacaacaa tctcaagttg ccatacatag ccgttgtcag cttctaacca
      241 attaccttta tttgataaat tataaggaaa aggcagtgtg tatccagcac gggcaggagt
      301 tttattttcg tttaatagaa cctgaggtaa tatatttggt atttcaatag aagggatctc
      361 accgtttaat gaactatgga aactatcagg tataccttta gttgatattt gagatattgc
      421 aaaagcatga actaaaatta gtagtactag aagtaaaaac cgattcttca tatataatta
      481 catcctaaaa gaaataacaa aattctatct aataatcgat agcgttttta caacatgatt
      541 gtcaccatta ataatattaa ccaaatataa tccatcaggt tgcaatttaa ggtcaagtac
      601 atatgtattt ttatctctta ttaatttctt attactaata atattacctt caacatctga
      661 cacattgatc ttaacttctt tattatcggt gcttgcaaat tgaaggatga atattcctgt
      721 tcctggattt ggataaattc taaaatcatc aggtccatca aaatcttcaa tcccaaccca
      781 gtcaaccagg atgtagtctt ccattaattt caaatcgctg cctacagcat ttgttacgtt
      841 taagcttacg ttatatgcac caccaacagt atataatata ttttcgggat tttgttccgt
      901 tgatatacct ggagtacctc cttcaaattc ccatgcccac tcgattgggt taccagttga
      961 taagtcacta aaattaacag tttcatcctg cattatatgt gtattgtctg cagtaaaatc
     1021 agctacaggt gcagaaccac ctactattat ataatcttct ttcactaatg tatcagaacc
     1081 acctagattt gtggctatta acgtaactgt aaaaacacct tcattattaa aacgaatagt
     1141 tgggttttgt tgggatgatg ttcctggcga tccttcttca aatgtccatg cccactcata
     1201 tggatctcca gtagataaat cagtgaaatg taccgatgtg cctggtagca catgagtagc
     1261 atcagcttca aaatcggcag ttggaagtgc cattgcattt acatgaatat aatctggttt
     1321 tatttcagta tcagtaccat cggcatttgt aacggttaaa ctaacatcca tatatccagt
     1381 gtcgggataa acaacccatg gattttcttc tgttgaagtt ccaggattac cgctttcaaa
     1441 tgtccaatcc cattcataaa caccaggctc agacaggtct gtaaaaaata ctgtatcgcc
     1501 ctgagttatt tcagtattat cagcaatata atcagcaata ggagggataa tttgccatga
     1561 aacaccaggt aatttctcca ttccagtgtt accaggatca agccagtctt gaagtcgggt
     1621 agctgctgta ttcccattat gatcccatga ataccaaatc ttcccataat aggcaggtga
     1681 tgggtttgtg catgaatttg atgt
//
LOCUS       DASCQP010000106         2996 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000469311, whole genome shotgun sequence.
ACCESSION   DASCQP010000106 DASCQP010000000
VERSION     DASCQP010000106.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2996)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2996)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2996
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000469311"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1139)
                     /locus_tag="QF480_01825"
     CDS             complement(<1..1139)
                     /locus_tag="QF480_01825"
                     /inference="COORDINATES: protein motif:HMM:NF017044.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HJN05328.1"
                     /translation="MEDLLNATVEDVKEFHQKFYGPNNATLVLAGDFDVDEAKILIQK
                     YFGEIKKGNDIVDPLPMPVTLTETKKVYHEDNFARASQLRMIWPTVEQYNDDSFPLDY
                     LGEVLSSGKKAPFYKILEKEKQLTSSQYAYNSSQEIAGTFNVVVTSNQGVSLKEVEEN
                     IFDGFALFEKEGITDEDVERIKASLETNFYNGISSILGKSYQLANYNEYTGDPAYFST
                     YIEKLKAVTKEDIMRVYDKYVKGKPYLATSFVPKGKLDMIAEGSIMAEIVEEDITNAA
                     EVGTGEDEVEEEIVITPTTLDRSIMPEDGPDPLLNLPIVWTEELDNNMGVYGIEHNEL
                     PLVRFNIVLRGGHYLDQLEKAGVANLVAQLMMKGTENKTPLELEE"
     gene            complement(1196..1939)
                     /locus_tag="QF480_01830"
     CDS             complement(1196..1939)
                     /locus_tag="QF480_01830"
                     /inference="COORDINATES: protein motif:HMM:NF025092.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HJN05329.1"
                     /translation="MKNIIIICLFLYSTVAIAQQSSLSGDLYDESGNPLIYATAVLLH
                     PDDSTMAYYGITNTEGHFVIKNIKAGNYILQTAYVGFQSLYKTLSLPLTEGNTLGALI
                     MSEIAMNLSEVQIKGERIPFVIKKDTIEYGAGAYKVKPDAAAEELLKKLPGVQVDRAG
                     NIKAQGEDVQNVLVDGKEFFGSDPQVATKNLPADAIKKVQVYNKKSDETELTGIEDGT
                     YAKTINLILKDDMKSTKLLITGLMGIHTV"
     gene            complement(1958..2725)
                     /locus_tag="QF480_01835"
     CDS             complement(1958..2725)
                     /locus_tag="QF480_01835"
                     /inference="COORDINATES: protein motif:HMM:TIGR01200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GLPGLI family protein"
                     /protein_id="HJN05330.1"
                     /translation="MKKTVLTIISLAILGFAFSQSDNDQVNNEGSVVYEAVQKLDIHL
                     DNMSPEIQAMLPKENRSSKRLYFNQYASRYQNIKETEESSMDHESGGGMVRIMVSHAD
                     DIVYRDLKDNEIIEQKEFMSRVFLIESDAPEVQWKFTGNQKMILNYPCQEATMEGEEG
                     LVKVWFTPAIPISSGPGEYGNLPGLILYVETNEGDNTIIAKSIELGEVDAKYLEKPKK
                     GKKVSREKYLAIVDEKNKEMGHDHGGNTKTVTMTIQR"
BASE COUNT          833 a          631 c          464 g         1068 t
ORIGIN      
        1 tcttcctcta attcaagtgg tgttttgttt tctgttcctt tcatcataag ctgtgcaaca
       61 agatttgcta ctcctgcttt ttccagttgg tcgaggtaat gtccacctct taatacaata
      121 ttaaaccgaa ccaaaggaag ttcattatgt tcaataccat aaacacccat attattgtca
      181 agctcttcag tccatacaat cggtaggtta agcaatggat cagggccgtc ttcaggcata
      241 atcgaacgat ccagggtagt tggcgtaata actatctctt cttctacttc atcttcacct
      301 gttccaacct ccgcagcgtt tgtaatatct tcttccacaa tttcggccat tattgatcct
      361 tcggcaatca tatcaagttt tcctttaggt acaaagcttg tcgcgagata gggcttgccc
      421 ttaacatatt tgtcataaac cctcataatg tcttctttag ttaccgcttt taacttttca
      481 atataggtac taaaatatgc cgggtcgccc gtatactcat tgtagtttgc taattgatag
      541 gattttccaa gaatactgct tataccgtta taaaaattgg tttccaaact tgctttaatt
      601 ctttcaacgt cctcatcggt tataccttct ttttcaaaaa gagcgaatcc gtcaaaaata
      661 ttctcctcca cttcttttaa gctaactccc tggtttgaag tcactacaac attaaaagta
      721 cctgcaatct cctgactgct attataggca tactgacttg aggtgagctg tttttctttt
      781 tcaagaattt tataaaatgg tgctttttta ccactcgata gcacttcacc caaataatcc
      841 agcggaaagg aatcatcgtt atactgctca acagtaggcc aaatcatacg caattgcgat
      901 gcgcgtgcaa aattatcttc atgataaacc tttttagttt ctgtaagagt gaccggcatt
      961 ggcaacggat caacaatatc attgcccttt ttaatttctc caaaatattt ctgaattagt
     1021 atttttgcct catccacatc aaaatcacct gccaatacta aagtggcatt attagggcca
     1081 taaaactttt ggtgaaactc tttcacatct tcaacagtgg catttaacaa atcttccatc
     1141 tcaccaatta cagtccagct atacggatgt cctttggggt agagattctt agctattaca
     1201 ccgtatgtat gcccataagg cctgttatca gtagtttggt gcttttcata tcatctttca
     1261 atattaaatt aattgttttt gcataggttc cgtcttcaat cccggtcaat tctgtttcat
     1321 cagatttttt attgtaaacc tgtactttct tgatagcatc ggccggtaga tttttggttg
     1381 ctacttgtgg gtcgctgcca aaaaattctt tcccgtcaac caatacattc tgcacatctt
     1441 caccttgagc ttttatatta ccagctctat caacctgaac gccagggagt ttctttagta
     1501 gttcttcagc tgctgcatct ggtttaacct tataagctcc ggcaccatat tctatcgtat
     1561 cctttttaat aacaaatgga atacgctcgc ctttaatctg tacttctgag agattcatag
     1621 caatctcact cataattaaa gcaccaagcg tatttccttc cgttagcggc aggcttaagg
     1681 ttttatatag tgattggaat ccaacatatg ccgtttgcag aatataattc cctgccttga
     1741 tgtttttgat cacaaaatga ccttcagtat tggttattcc gtaataagcc atggttgaat
     1801 catcgggatg tagtaatact gcagttgcat atataagtgg gttacccgat tcgtcgtaca
     1861 aatcaccgct caatgaagat tgttgagcaa ttgcaactgt actatacagg aacaagcaaa
     1921 ttattataat gttcttcata gcttattagt tttaaaatta gcgttgtatt gtcatggtta
     1981 cagtttttgt attcccacca tgatcatgcc ccatttcctt gttcttctca tcaacaattg
     2041 caagatattt ttcgcgactt accttttttc cttttttagg tttctccaaa tatttagcat
     2101 caacctctcc tagttcaatc gattttgcta ttattgtatt gtcgccttca tttgtttcta
     2161 catacaagat caaaccgggt aaatttccat actcacctgg tcctgatgaa attgggatag
     2221 caggagtaaa ccaaactttt accaagcctt cttcaccctc catggtagct tcctgacagg
     2281 gataattcaa tatcattttt tggtttcctg taaatttcca ctgtacttcc ggagcatctg
     2341 attctatcag aaacactctc gacataaatt ctttttgctc tataatttca ttatccttta
     2401 agtctctata tacaatatca tctgcatgac taaccattat tcttaccatt ccaccacctg
     2461 attcatgatc cattgatgac tcttcagtct cctttatatt ttgatatctg gaggcatatt
     2521 gattaaaata aagccttttg ctggagcgat tttcttttgg aagcatcgct tgaatttcag
     2581 gactcatatt atcaagatgt atatcgagtt tctgaacggc ttcatatact accgaaccct
     2641 cattattaac ctgatcgtta tctgactgtg aaaaagcaaa acctaagatt gctaaactga
     2701 taattgttaa aactgttttc ttcatttgag taatatttaa ttaataatta gaataattta
     2761 tttgctgcca aaactagttt tagagatgct acaataaggt taatccatgg ccaattaagg
     2821 ttaattgatt gataattaat gctttttaga ttatgtttgc caaggcaatc atgaagaaga
     2881 aaacacatag gaaaatttct acaattggaa tactgatgat aataagtcag attctactta
     2941 ccctgtttct tggttattgg gtatatgctc agttccttaa tcaaaagcgg ttactt
//
LOCUS       DASCQP010000107         3067 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000475110, whole genome shotgun sequence.
ACCESSION   DASCQP010000107 DASCQP010000000
VERSION     DASCQP010000107.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3067)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3067)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3067
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000475110"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..230
                     /locus_tag="QF480_01840"
     CDS             <1..230
                     /locus_tag="QF480_01840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006254027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="SufD family Fe-S cluster assembly protein"
                     /protein_id="HJN05331.1"
                     /translation="YIKTNNNTAIVEHEATTSKISEDQLFYCQQRGIDSEQAISLIVN
                     GYAKEVLNKLPMEFAVEAQKLLAITLEGSVG"
     gene            271..1032
                     /gene="sufC"
                     /locus_tag="QF480_01845"
     CDS             271..1032
                     /gene="sufC"
                     /locus_tag="QF480_01845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017141797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly ATPase SufC"
                     /protein_id="HJN05332.1"
                     /translation="MNIKENMLLDIKDLHVSIGGNEILKGIDLSINYGEVHAIMGPNG
                     TGKSTLAAAITGRNGYEITSGEIIYKSNNINEVPADIRAKEGIFLSFQYPVEIPGVSI
                     TNFMRTALNAKREFEGLPAIKANEFLKKMEAMKKLIDIQSKLTNRSVNEGFSGGEKKK
                     NEIFQMAMLEPTLAILDETDSGLDIDALKVVAKGVNAFRSSENAFLVITHYQRLLDFI
                     VPDFVHVMFDGRIVKSGRKELALELEEKGYDWIKK"
     gene            1055..2476
                     /gene="sufD"
                     /locus_tag="QF480_01850"
     CDS             1055..2476
                     /gene="sufD"
                     /locus_tag="QF480_01850"
                     /inference="COORDINATES: protein motif:HMM:TIGR01981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufD"
                     /protein_id="HJN05333.1"
                     /translation="MIKLSENNYKPLELSLLSHYQDNKDNKYKLCHPKVKQAREDGIS
                     QFEDIRLPLTSNEKWHQTNIQHLYDMDFDIGDNKPEFNKRINEIFHCYVHGFDTNVFA
                     LLNGWYYNSNDKLLETLDDGIIVGSIIAAQEAYPELIDSYFNEIAKESQHGLGAVNAA
                     VFTDGIFVYVPDNVESKKALQLIKMVNRDKNVMINSRNLIIVGKNSSLTFLHCDDSIN
                     QHSGFLVTNTEVFLDKNAKLDLYKLQNLNNQTTLVNSTSVHQESNSDLKVNVLTFNGG
                     SIRNEINVDLQGEHAAADISGIYLIDNKQHVDNQVVIKHSVENCTSNEMFKGVLDDSA
                     SAVFNGHIYVARDAQRTKAFQKNANILMTPNATIDTMPFLEIYADDVVCSHGATVGQI
                     DDNALFYLMQRGISESDAKLLLMYAFITEVTSKISINALRLSIDDMVKKRLRGDLSIC
                     DKCVLHCSTPDIPIEFEIDLSKI"
     gene            2481..>3067
                     /locus_tag="QF480_01855"
     CDS             2481..>3067
                     /locus_tag="QF480_01855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009228157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HJN05334.1"
                     /translation="MDFPIVQIRSDFPILSQKINNKPLVYFDNAATTQKPLDVIKRIS
                     DYYKKENGNVHRGMHYLSNIASEHFENARRYVAKFINAKSEKEIIFTKGTTDSINLVA
                     SVMTDFIKPNDEVIITAMEHHSNLVPWQQLCIKQKAKLKVIPIDSDGNLDLDAFKKMI
                     NTSTKLLSITHISNVLGTINPIKEIVKMAHEHNVPV"
BASE COUNT         1113 a          493 c          561 g          900 t
ORIGIN      
        1 catacataaa aactaacaac aacacagcga ttgttgaaca tgaagctaca acctcaaaaa
       61 tctctgagga tcaactgttt tattgtcagc aacgaggaat tgatagcgaa caagctataa
      121 gcttaatcgt aaatggttat gctaaagaag ttttaaataa actgccaatg gaatttgccg
      181 tagaggcgca aaaactactg gcaataacac tcgaaggaag tgtgggatag actagttgaa
      241 taacaaacaa atattaagtg tatttgtaaa atgaacataa aagaaaatat gctattagat
      301 ataaaagatc ttcatgtttc tattggtgga aatgaaatac tcaagggtat tgacctttct
      361 attaattatg gtgaggttca tgcaataatg gggccaaacg gtactggcaa aagtacttta
      421 gctgcagcaa ttacaggacg taatggatac gaaattacct ctggagaaat aatctataaa
      481 agcaataaca taaacgaggt tccagccgac attagagcaa aagaaggaat atttcttagt
      541 tttcaatatc ctgttgaaat accaggtgtt agcattacaa attttatgcg tactgcttta
      601 aatgcaaaac gcgaattcga aggattgcca gcaatcaaag caaatgaatt cctgaagaaa
      661 atggaggcta tgaagaagct cattgatatt cagtcgaagt taacaaatcg ttctgttaac
      721 gagggctttt caggtggaga gaagaagaaa aatgagattt tccagatggc aatgcttgag
      781 ccgactcttg ctatactaga cgaaactgac tcaggacttg atattgatgc actaaaggtt
      841 gtggcaaaag gagttaatgc ctttcgctca agcgaaaatg cttttcttgt aataactcat
      901 tatcagcgcc tccttgattt tatagttcct gattttgtgc atgttatgtt tgacggaaga
      961 attgttaaat caggcagaaa agaattggct ctagaacttg aagagaaagg ttacgactgg
     1021 ataaagaagt aggtgtaaaa cgattaccat tataatgatt aaactatcag aaaataatta
     1081 taaacccttg gaattatcct tgctctctca ttatcaagat aacaaagata ataagtacaa
     1141 actatgtcat ccaaaagtta agcaagcaag agaggatggg ataagtcagt ttgaagatat
     1201 cagacttcct ttaacaagta atgaaaaatg gcaccaaaca aatatccagc atctttatga
     1261 tatggacttt gatatcggtg ataataaacc agagtttaat aaacgaataa atgaaatttt
     1321 tcattgttat gttcatggat ttgacacaaa cgtttttgct ttactcaacg gctggtatta
     1381 taactcaaat gacaaactac ttgaaaccct tgatgatggc attatcgtag gtagtatcat
     1441 agctgcacaa gaagcttatc cggaacttat tgatagttat tttaatgaaa tagctaaaga
     1501 gtcacaacat ggattaggtg ctgtaaatgc agccgttttc acggatggaa tttttgttta
     1561 tgtaccagat aacgtagaat ctaaaaaagc tcttcagctt attaaaatgg taaatcgtga
     1621 taaaaatgta atgattaatt cacgaaacct tatcatagtt ggcaaaaaca gtagtttgac
     1681 atttttacac tgtgatgatt ctattaatca acattctgga tttttagtta caaatactga
     1741 agtgttcctc gacaaaaatg caaaacttga cctttacaaa ttacaaaact taaacaacca
     1801 aactactctt gtgaattcta cttctgtaca tcaggaaagt aatagcgatc taaaagtaaa
     1861 cgtgttaacc ttcaatggag gatctattag aaatgaaatt aatgttgatt tacaaggtga
     1921 acatgctgct gctgacataa gcggaattta tttaattgat aataaacaac atgttgacaa
     1981 ccaggtagta ataaagcact cagttgaaaa ttgtaccagc aatgagatgt tcaaaggagt
     2041 gcttgatgat agtgcatcag ctgtttttaa cggacatata tatgttgcca gagatgctca
     2101 aagaactaaa gctttccaaa agaatgctaa catacttatg actcccaacg caacaattga
     2161 cactatgcct tttcttgaaa tttatgctga cgatgtagtt tgtagtcatg gtgcaactgt
     2221 tggtcaaatt gacgataatg cgttgtttta tttaatgcaa cgtggaattt cagaaagcga
     2281 tgcaaagttg ctactcatgt atgcgtttat tactgaagta acaagtaaga ttagcatcaa
     2341 cgccctcaga ctaagtattg atgatatggt taaaaaaaga cttcggggcg atctatcaat
     2401 ttgtgacaaa tgcgtattac attgctctac gccagacatt ccaatcgaat ttgaaataga
     2461 tttgagtaaa atataataac atggatttcc caatcgtaca aatcagatct gacttcccca
     2521 ttttatctca aaagataaac aataaaccac ttgtttattt tgataatgcc gccacaactc
     2581 aaaaacctct ggatgtcata aagagaatat ctgattatta caaaaaggag aatggcaatg
     2641 tacatcgtgg gatgcattat ttaagcaata ttgcgtctga gcatttcgaa aatgcacgaa
     2701 ggtatgtcgc aaagtttatt aatgccaaaa gcgaaaaaga aattattttc acaaaaggca
     2761 caactgattc aattaatctg gtcgcatcag tgatgactga tttcattaaa ccaaatgatg
     2821 aggtaattat cactgcaatg gagcatcatt ccaacctggt tccctggcaa caattatgca
     2881 ttaagcaaaa ggcaaaatta aaagttattc caattgattc agatggcaat cttgatctgg
     2941 atgcttttaa gaagatgatc aacacatcta caaaattact ttccattaca catatctcta
     3001 atgttcttgg tacgattaac ccgataaaag aaattgtaaa aatggctcat gagcataacg
     3061 ttccagt
//
LOCUS       DASCQP010000108         2642 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000483272, whole genome shotgun sequence.
ACCESSION   DASCQP010000108 DASCQP010000000
VERSION     DASCQP010000108.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2642)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2642)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2642
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000483272"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..212)
                     /locus_tag="QF480_01860"
     CDS             complement(<1..212)
                     /locus_tag="QF480_01860"
                     /inference="COORDINATES: protein motif:HMM:NF015048.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hotdog domain-containing protein"
                     /protein_id="HJN05335.1"
                     /translation="MKLISTNICKTSDIGVNDNLFGGTMLAWLDVAGGILASSACKSN
                     NVITLKMDEVLFKKPVKVKDLVRIYGR"
     gene            complement(357..2240)
                     /locus_tag="QF480_01865"
     CDS             complement(357..2240)
                     /locus_tag="QF480_01865"
                     /inference="COORDINATES: protein motif:HMM:NF024371.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3857 domain-containing protein"
                     /protein_id="HJN05336.1"
                     /translation="MININPAFATKEPRFKVSDIPKELTKGANAVVRYNDVVYERKTS
                     SDAVYFEAGAITILTKKGLRYSKFKEYYGKFSDVRRIRLKVYDANGNLVKKKGYDDIM
                     DISAIDGGTLYSDARVKVIDPEYQTLPFTVEYSYEVVYSGTLGTPRWFFHPGYNVAVE
                     ESSFMVITQGQIPLRFLAQNTDIVPEKTIENDKVTYFWQIENQPAVKPEAFSPSFEKV
                     MPVVYSAPSYFKIDKYPGNASEWESFGQWVNKLNDGRKDLPEETIVEIRSMLNDSLNE
                     LETIRMLYSWMQDKTRYVSIQIGIGGWQPISAKQVDNCSYGDCKALSNYMHSILSVAN
                     IDSYYVLVRAGSNAPKLNIEFPSQQFNHAILCVPIENDTIWLECTSQTVPCGFIGGFT
                     DDRDVLLISDRGGEIVTTKTYGKSDNYSSTNTIVKLNKYGDGEANIKSTASGLYYNKR
                     RSVVYSTIKNRKEFIINNIDIPSFELVNFSFDETKSLVPKIEEEINLTLKSYATKLGK
                     RLLFEVNLLNKHDYKFKRSGKRKNNILIRREFKETDTVVYNLPKNYIIESLPKGTEIN
                     SEFGNYSTQIDVDSSQITYIRNFEMNKGSYPNSRFADFKQFSTDIRKADNQKVVLINN
                     GSD"
     gene            complement(2351..>2642)
                     /locus_tag="QF480_01870"
     CDS             complement(2351..>2642)
                     /locus_tag="QF480_01870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05337.1"
                     /translation="IDFVYPRERSGMINISLPPGVEVLETPEPLMLKMPNKSIDYVYS
                     ISQLGNKLVLNYRLRINNFVISMMDYPNLRNIYEQIIEKESEPVILKLTNLN"
BASE COUNT          817 a          486 c          357 g          982 t
ORIGIN      
        1 cgtccgtata ttctaaccaa atccttaact ttaactggtt ttttaaatag cacttcatcc
       61 attttaagag tgattacatt attagattta catgcggaag atgctaaaat tcctccggct
      121 acatcaagcc atgctaacat tgtaccacca aaaagattat catttactcc tatatcactt
      181 gttttacaaa tatttgtaga gatgagtttc attgtttctt taattattac ttttcaaaag
      241 taacaaatta tggggtagta atattgatag attgattggg tttaattatt ccagatatat
      301 atccttatca atcaatggag ttgctttggc aaatctacta gtatgtaatc aactcattaa
      361 tcagaaccat tatttatgag cacaactttt tgattatcgg cttttctgat atcagtagaa
      421 aattgtttaa agtcagcaaa tctactattt ggataactac ctttattcat ttcaaaattt
      481 ctgatataag taatctggga actatcaaca tcaatttgtg ttgaataatt cccaaattct
      541 gaattgattt cagttccttt tggcagagat tcaatgatat aattcttcgg aagattgtaa
      601 acaactgtat cggtttcttt aaattctctt ctaattaata tattattttt ccgttttcct
      661 gatcgtttga atttatagtc gtgtttattc aataaattca cttcgaatag taaccgcttc
      721 cctagctttg tggcgtagct ttttaatgtt agattaattt cttcttcaat tttaggcact
      781 agactctttg tttcatcaaa tgaaaaattc acaagttcaa aagatggaat atcaatatta
      841 ttgattataa actctttacg gttctttatc gtagaatata caactgaacg acgtttatta
      901 tagtataatc cactagctgt actttttata ttggcctcac catcaccgta tttatttagt
      961 tttacaatag tatttgtact actataatta tcgcttttac catatgtttt cgttgttact
     1021 atttctcccc ccctatcaga aatcaataat acatccctat catcagtaaa acctccaata
     1081 aatccacacg gaactgtttg acttgtacac tcaagccata ttgtatcgtt ttctattgga
     1141 acacagagta ttgcatgatt aaactgctga cttggaaatt caatatttaa ttttggagcg
     1201 ttactaccgg ctctgactag tacataatat gaatcaatat ttgcgacact taaaattgaa
     1261 tgcatataat tcgagagagc cttacaatca ccatatgaac aattatctac ttgttttgca
     1321 gatattggtt gccagccacc aattccaatt tgaatgctaa cgtatcttgt tttatcctgc
     1381 atccaactgt acaacattct aatcgtctca agttcattca atgagtcatt taacattgat
     1441 ctaatctcaa caatggtttc ctcaggcaaa tctttccttc catcgtttaa cttattaacc
     1501 cattgtccaa aactttccca ttcacttgcg tttcccggat acttgtcaat cttaaagtat
     1561 gatggtgctg aatatacaac tggcattact ttttcaaacg aaggagaaaa ggcctccggc
     1621 ttgacagctg gctggttttc tatttgccag aaataagtta ccttatcatt ttcaatggtt
     1681 ttttcaggga ctatatccgt gttctgagct aaaaacctga gtggtatttg cccctgggtt
     1741 attaccatga acgatgattc ttccacagca acattataac cgggatggaa aaaccaccta
     1801 ggagttccta atgttcctga atatacaacc tcgtaactat actcaactgt gaatggaaga
     1861 gtttgatatt caggatcaat tactttaact cgcgcatcag aatacaaagt gccaccatca
     1921 attgcactta tatccataat atcgtcatag cctttcttct tgacaagatt tccatttgca
     1981 tcatatacct ttaatctaat tcttctcaca tcagaaaact tgccataata ttctttgaat
     2041 tttgaatatc ggagtccttt tttggttaga atagtaatgg ctccagcttc gaagtaaact
     2101 gcatccgaac ttgtttttcg ctcatatact acgtcattat atctaactac cgcatttgct
     2161 ccttttgtca attctttagg aatatcactt actttgaacc taggctcttt cgttgcaaat
     2221 gctgggttta tattaatcaa ttgtattaca attaaaagaa tatatatttg agaaaattta
     2281 tttttataaa ctgtattgct tttcatagta ataaataatt caagttttct aacatttaac
     2341 tatttaccgt ttaattgaga ttcgttaact taagtattac aggttctgat tccttctcaa
     2401 ttatttgctc ataaatattt cttaggttag gataatccat catacttatt acaaaattat
     2461 ttattcttaa tcgataatta agaaccagtt tattacccaa ttgagatata ctatatacat
     2521 aatcaattga tttattaggc atctttaaca ttaaaggttc aggagtttca agtacttcta
     2581 ctccaggagg taaagatata tttatcatac ctgatcgctc acgaggataa acaaaatcaa
     2641 ta
//
LOCUS       DASCQP010000109         3585 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000488314, whole genome shotgun sequence.
ACCESSION   DASCQP010000109 DASCQP010000000
VERSION     DASCQP010000109.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3585)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3585)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3585
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000488314"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1016
                     /locus_tag="QF480_01875"
     CDS             <1..1016
                     /locus_tag="QF480_01875"
                     /inference="COORDINATES: protein motif:HMM:NF013080.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="LTA synthase family protein"
                     /protein_id="HJN05338.1"
                     /translation="QSLDGKEGITPQFRKLENEGILFTDFYASGNRSQQAMSAILAGF
                     PSTPITAITHNLDKITQLPSLTKTLEKEGYSSSFYFGGQLMYGGINSFITVNGFDIIK
                     DVSDFDDDLPRGKLGIFDEYILNEQIVELNNEKQPFFSVLFTVSTHSPYDQPMDDVIN
                     WASNDNQNGYLNSAYYTDKCLGEYFENARKQTWYNNTLFILVADHSHNTYKNWPVDSK
                     EYRKIPLLLYGDVIKDEYRGKKINRIGSQTDIASTLLSQFNVEAKDFFWSRNLFNPTT
                     NEFAYYEATDGVGWITPNGYFVYKKTTDNYPELQINPQLKDSIIMDGKSYLQVVFKQF
                     IEY"
     gene            1218..1397
                     /locus_tag="QF480_01880"
     CDS             1218..1397
                     /locus_tag="QF480_01880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05339.1"
                     /translation="MNFYSRISKYYNEIFPLNKTQISFVRSYLDGGSKDKKMLDIGCG
                     TGGLPIGLYDDFDSI"
     gene            1401..2000
                     /locus_tag="QF480_01885"
     CDS             1401..2000
                     /locus_tag="QF480_01885"
                     /inference="COORDINATES: protein motif:HMM:NF013382.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HJN05340.1"
                     /translation="MDTNEKLLKIAKQHTEKIDLDFIKLNMLDIDTQFPERSFDLALC
                     FGNTIVHLQNIEDVELFFKKVRLVLKPGGMFLFQIINYDFVLDSNLKGLPTIENEKIK
                     FERHYSLDKNEMIDFSTVLTIKETGEILNNSVKLFPVRKKQAERALKNAGFEHIKSYS
                     SFTKNEYNPRSLPLVFECQEKPKKVRLRNFILRNLTNRL"
     gene            complement(2099..3064)
                     /locus_tag="QF480_01890"
     CDS             complement(2099..3064)
                     /locus_tag="QF480_01890"
                     /inference="COORDINATES: protein motif:HMM:NF024832.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis C-terminal
                     domain-containing protein"
                     /protein_id="HJN05341.1"
                     /translation="MVKWINGYSLRLAIGEKRIKTYNILFTIQISVMLAVFIYQLFAL
                     KNTNVDAYIIGLYFGYGTAAVIGFIAVIYRADSFSLAGWKTITRRVLNYGMVILLANL
                     LNIGNNRVSFYIIRYYLGISTLGVYNAGIQLTEGLRVIGQSIAVVQFSTISNSNQPEY
                     ARVLTIRLMKLSIILTCMALLLLIVIPENIYSMLLTKDFSGVKPIVIVLSPGVIALAI
                     NNVFSHYFSGMGNPKINLHAKITGLVFTFLLIFILIPAFGYIGAAITASVSYTATIIH
                     QYIIFKKQTKTRFAEWIPVRKDLTEFRSLIKVALKKSQKEKAANL"
     gene            complement(2968..3420)
                     /locus_tag="QF480_01895"
     CDS             complement(2968..3420)
                     /locus_tag="QF480_01895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05342.1"
                     /translation="MLKKIIGTTSTRILNAIFALIVLYLIANYIGAKGMGVIGLIILD
                     ITIIQLVIDLVAGNALIFFASRTNLGKLLIPAYLWIGIVIVFFTSLFLFANSVLPSSV
                     IDIVVPKGYATHILLLALLSGLMVTHYDLLLGKSASKHTIYCSQFKLV"
BASE COUNT         1290 a          590 c          597 g         1108 t
ORIGIN      
        1 tccaatctct cgacggaaag gagggtatca ctccacaatt tcgaaaattg gaaaacgaag
       61 gaattctatt cactgatttt tatgccagtg gcaacagatc gcaacaggca atgtcagcaa
      121 ttttagctgg ctttccttca acacctatca cagcaattac tcataatctt gataaaatta
      181 cccagctgcc aagtctgaca aagacattag aaaaagaggg atattcttct tcattttatt
      241 ttggtggcca attgatgtac ggcggtataa attcatttat caccgttaac ggatttgata
      301 ttattaagga tgtgagtgat tttgacgacg atctaccaag aggcaaattg gggatttttg
      361 atgagtatat cctgaatgaa cagatagtag aattgaataa tgaaaaacag ccgttctttt
      421 cagttttgtt tactgttagc acacattcac catatgatca gcctatggat gatgtaataa
      481 actgggcttc aaatgataac caaaatggct acttaaactc agcttactat actgacaaat
      541 gtttgggaga atatttcgaa aatgccagaa aacaaacttg gtataacaat acccttttta
      601 tacttgttgc tgatcatagt cataatactt acaaaaactg gcctgttgat tctaaagagt
      661 accgtaaaat accattattg ctgtacggtg atgtaataaa ggatgaatac cgaggaaaaa
      721 aaataaacag aataggatca caaacagaca ttgcatcaac cttactttca cagttcaatg
      781 tagaagcaaa agattttttc tggagccgta atttatttaa cccaacaaca aatgaatttg
      841 catattatga ggcaactgac ggtgtaggat ggataacacc aaacggatat tttgtttata
      901 aaaaaacgac ggataattat ccagaacttc aaatcaatcc ccaattaaag gattcaataa
      961 ttatggatgg aaaatcctat ttacaggtag ttttcaagca gtttattgag tactagataa
     1021 ttatatttga cacaactttg tgcgccttag tgtgcactta gtggcccttt gtggttggtt
     1081 ctttaaattt ttaaccacaa agtacccaaa ggtagtcaca aaggatcaca aagccttttg
     1141 tatgacccag gcaagataaa tccacatacc ctaagtttgt attcagttat atttgcaatt
     1201 ctcaaaagtg ataaacaatg aacttttatt ctcgtatttc gaaatactat aatgaaatct
     1261 tcccactaaa taaaactcaa atatcttttg tgagaagtta tttggatggc ggatctaaag
     1321 acaaaaaaat gcttgatata ggatgtggaa ctggtggttt acccattggt ctttatgatg
     1381 attttgattc gatataggcc atagacacaa atgagaaatt acttaaaata gcaaaacaac
     1441 acacggaaaa aatagactta gactttatta aattgaatat gctggatata gacacccagt
     1501 ttcctgaaag gagttttgac ttagccctat gctttggcaa tacaattgtg caccttcaaa
     1561 atatagaaga tgttgaattg tttttcaaga aagttagatt ggtgttaaag ccaggcggaa
     1621 tgtttttatt tcaaataatt aattacgatt ttgtgctgga tagtaatttg aaaggtttgc
     1681 ctacaattga aaatgaaaaa attaaatttg aacgacatta tagtcttgat aaaaatgaaa
     1741 tgatagattt ttctacggtt cttaccataa aagaaacagg agaaatttta aataatagtg
     1801 taaaactttt tccagtaaga aaaaaacagg ctgaaagagc tttaaaaaat gccggattcg
     1861 aacatataaa atcgtatagt tcatttacaa agaatgaata caaccccagg agtttaccat
     1921 tagtttttga atgccaagag aaaccgaaga aggtgagatt acggaatttt atactaagaa
     1981 acttgacaaa cagattatag caaaaacctc aactatggct ttggtcgcat aagcgcccgg
     2041 caaatacacc tgacagattt atttcgacac gatatccggg taaatagaaa acaaaaaatt
     2101 ataaattggc ggctttttct ttctgggatt ttttcaatgc tactttaatc aatgaacgaa
     2161 attctgttaa atcttttcta actggaatcc attcagcaaa acgtgttttt gtttgtttct
     2221 taaaaataat atattgatga ataatagtag cggtgtaact aacggaagct gtgatagctg
     2281 ccccgatgta tccaaatgcc ggaattaaaa taaatataag aaggaaagta aaaacaagtc
     2341 cggttatctt ggcatggaga ttaatttttg gatttcccat tcctgagaaa taatggctga
     2401 atacgttatt tatggctaat gcaattacgc cggggcttaa aacaataact ataggtttta
     2461 ctcctgaaaa gtctttagtt aataacattg aataaatatt ttcgggaatt acaatgagca
     2521 acagcaaagc catacaggtc agtattatag aaagtttcat caatcttatt gtaagtaccc
     2581 gggcatattc gggttgattg ctatttgaaa tagtagaaaa ttgtactaca gcaatacttt
     2641 gccctataac ccgtaaacct tcggtaagtt gaataccggc attatacaca ccaagtgtgg
     2701 aaatccctaa ataatatcga ataatataaa aacttacacg gttattgcca atattaagga
     2761 ggttagccaa tagtatcacc attccataat tcagaactct tcttgttatt gttttccatc
     2821 ctgctaaact gaaactatcg gctctgtaaa taactgcaat aaaacctata actgcagctg
     2881 ttccataacc aaaatacaag ccaataatgt atgcgtcaac attagtgttt tttaaagcaa
     2941 atagctggta aataaataca gccagcatta cactaatttg aattgtgaac aatatattgt
     3001 atgttttgat gcgcttttcc ccaatagcaa gtcgtaatga gtaaccatta atccacttaa
     3061 caatgctaac agtaaaatgt gtgtggcata gccttttggt acaacaatat caataactga
     3121 tgaaggtaaa actgaatttg caaaaaggaa aagtgaagta aaaaacacta ttacaatgcc
     3181 aatccataag taagcaggaa taagcaattt tccgagatta gtccgtgaag caaagaaaat
     3241 gagtgcatta cctgctacca aatcaatcac aagttgaata atagtaatat ccagaataat
     3301 caatccgatt acacccatgc ctttggcccc aatatagttg gcaattaggt acaaaactat
     3361 taatgcgaaa atggcattaa gaattctggt acttgttgtt ccgataattt tctttaacat
     3421 attactatcg ttattgcaaa gttaaaaaac tcaacgatta tccttacagc tttaacttta
     3481 actaaaaatc cgttaaacaa ttgctctatt ttcaaatctc ttccttaata ttgattacag
     3541 tatttctcta aaacttctat ttttgttatt taatatcttc atata
//
LOCUS       DASCQP010000110         2614 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000490553, whole genome shotgun sequence.
ACCESSION   DASCQP010000110 DASCQP010000000
VERSION     DASCQP010000110.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2614)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2614)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2614
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000490553"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1480
                     /gene="polA"
                     /locus_tag="QF480_01900"
     CDS             <1..1480
                     /gene="polA"
                     /locus_tag="QF480_01900"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011967084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006261 - DNA-templated DNA replication
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HJN05343.1"
                     /translation="PFFDTMIAHYLLQPDMRHNMDILSETYLNYEPVSIEKLIGKKGK
                     NQLNMREVDIELVKEYASEDADVTLQLKNVFEPKLEETGTSNLFDKTEMPLVPVLASM
                     ESEGIKLDVPALNEFSIQLKNEIIKIEAKIYELADTEFNIASPKQLGEVLFEKLAITS
                     KPKKTKTGQYKTGEDILIKLIYKHPIVEEILEYRSLAKLKSTYVDALPALVNPRDGRI
                     HTSFNQAVAATGRLSSNNPNLQNIPIRSEKGREIRKAFIPRNDNFVLLAADYSQIELR
                     IIAHLSKDKALIEAFNEGRDIHTATAARVYGVEYHEVTTDMRRNAKTVNFGIIYGISA
                     FGLSERLGIPRREAADIINSYFEKYPEVKKYMNDTIIFAKEHGYVETILGRRRYLKDI
                     NSANSVVRGFAERNAINAPIQGSSADMIKVAMIKIYNEFLNKRLKTKMILQVHDELVF
                     DLLKEEEKVVCQIVEKSMINAINLDVPVVIDMNTGNNWLEAH"
     gene            1525..>2614
                     /locus_tag="QF480_01905"
     CDS             1525..>2614
                     /locus_tag="QF480_01905"
                     /inference="COORDINATES: protein motif:HMM:NF012692.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HJN05344.1"
                     /translation="MTQPINNTILTLDAGGTNLVFNAVDPNNKLTATTILTASSNNLD
                     EFFKKLVSGFNTINQKTGNKAKAISFCFPGPADYDKGIIGDLENLPFFRGGVALKDIL
                     ENEFKIPVYINNDGDLFTLGEAINGLLPQINSALEENGNTKQYRNLFGVTLGTGTGGG
                     IVINGELLIGDNTAGGEINRSNNVLNSEMSIEETLSIRGINNLYSEASGISQDLCPDP
                     DEIFEIGKGIKQGNQAAAVQAWETFGLVLGQTLANAITLIDGLIVIGGGLSGAHSLFL
                     PKAIETMNGKFNTITGQTIDRLETQAYNFENEISMNEFLYKDEINIEVPYSKQSVMYL
                     PHKKIGVGISRLGTSKAVAIGAAAYANRK"
BASE COUNT          950 a          418 c          501 g          745 t
ORIGIN      
        1 accatttttc gacacgatga ttgcccatta tttgcttcag ccagatatgc gtcataatat
       61 ggacatatta tctgaaactt atcttaatta cgagccggtc tcaatagaaa aactaattgg
      121 caaaaaaggt aaaaatcaac taaacatgcg tgaagttgat atagaactag ttaaagaata
      181 tgcttctgaa gatgctgatg ttacccttca gctaaaaaat gtgtttgaac ctaaattaga
      241 ggaaaccgga acttctaacc tttttgataa aacagaaatg cctctcgttc ctgtattggc
      301 atccatggaa tcagaaggga ttaaactaga tgttccagct ctaaacgaat ttagcataca
      361 acttaaaaac gaaataatta agattgaggc aaaaatttat gaacttgccg atactgaatt
      421 taacattgcg tcgccaaagc aattaggaga agtacttttt gaaaaactcg ctataactag
      481 caagcccaaa aaaacaaaaa ccgggcagta taaaacaggc gaagatattt tgattaagct
      541 gatttacaag catcctattg ttgaagaaat acttgagtat aggtcattag caaagctcaa
      601 atcaacatat gttgatgcac tacctgcctt ggtgaaccca agagatggcc gaatacacac
      661 atctttcaat caggcagttg ccgcaaccgg tagattgagc tcaaacaatc ctaatttaca
      721 aaacatacca attagatcag aaaagggtag ggaaattcga aaagcgttca ttccaagaaa
      781 tgataatttt gtactacttg ctgctgatta ttctcaaatt gagctacgaa ttatagccca
      841 tctcagcaaa gataaagcac tgatagaagc atttaacgaa ggccgtgata ttcataccgc
      901 tactgcagcc agagtatatg gagtagaata tcatgaagta acaacagata tgcgccgcaa
      961 tgctaaaact gtaaattttg gtataattta tggaatttct gcatttggat taagcgaacg
     1021 attagggata ccacgtcgtg aagcagcaga tataataaac agctattttg aaaagtatcc
     1081 tgaagttaaa aagtacatga acgataccat tatatttgca aaggagcatg gttatgtaga
     1141 aacaattttg ggtcgcagac gatatcttaa ggacattaat tctgctaatt ctgtggtaag
     1201 gggatttgct gaacgaaatg ctattaatgc gccaatacaa ggctcatcag ctgacatgat
     1261 aaaggttgct atgattaaga tttacaatga gtttttaaat aaaagactta aaactaagat
     1321 gattcttcag gtgcatgatg aacttgtttt tgatttactt aaagaggaag aaaaagtagt
     1381 ttgtcaaatt gtagaaaaga gtatgattaa tgctattaat cttgatgttc cggtcgttat
     1441 cgatatgaat actggtaata actggttgga agcgcattaa tatttacagc caaattaatt
     1501 aaaacttaat tgaactatca gcaaatgaca caacctataa ataatacaat acttacgtta
     1561 gatgctggag gaacaaacct ggtttttaat gcggttgatc caaacaacaa attaacagct
     1621 acaactatat taactgcttc atcaaataat cttgatgaat ttttcaagaa attagtgtca
     1681 ggattcaata ccataaacca aaaaacaggt aataaagcaa aagctattag tttctgtttt
     1741 ccaggcccag ccgattacga taagggcata attggtgatc ttgaaaatct tccttttttc
     1801 agaggaggtg ttgcattaaa agatatactc gaaaacgaat tcaaaattcc ggtatatata
     1861 aataatgatg gagatctttt tacccttggt gaagcgataa acgggttatt gccacaaata
     1921 aatagtgcgt tagaagaaaa tggcaatacc aaacaatatc gtaatctgtt cggtgttact
     1981 ttaggcacag gtaccggagg tggaattgta attaatggag aacttttaat tggtgataac
     2041 actgctggag gtgaaataaa cagatcaaat aacgtactaa acagtgaaat gagtattgaa
     2101 gaaactctca gtattcgtgg cattaataac ctttatagtg aagcctcagg gattagtcaa
     2161 gatttgtgcc ctgatcctga tgaaatattc gaaattggta aaggaattaa acaaggaaac
     2221 caagctgctg ccgtgcaagc atgggaaaca tttgggttgg ttttaggaca aactcttgca
     2281 aatgcaatca ccctaattga tgggcttatc gtgattggag gaggtctatc aggtgctcat
     2341 tcactttttc tgccaaaggc aatagaaacc atgaatggaa aatttaatac tattactgga
     2401 cagacaattg accgactaga aacccaagca tataattttg aaaatgaaat tagcatgaat
     2461 gagtttttat acaaagatga aattaatata gaagttccat attcaaaaca atctgtaatg
     2521 tatttgcctc ataaaaagat tggcgttggg ataagtagac ttggaacttc taaggcagtt
     2581 gctattggtg ctgcagcata tgcgaacaga aaaa
//
LOCUS       DASCQP010000111         2944 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000490728, whole genome shotgun sequence.
ACCESSION   DASCQP010000111 DASCQP010000000
VERSION     DASCQP010000111.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2944)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2944)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2944
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000490728"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(7..933)
                     /gene="deoC"
                     /locus_tag="QF480_01910"
     CDS             complement(7..933)
                     /gene="deoC"
                     /locus_tag="QF480_01910"
                     /EC_number="4.1.2.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR00126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004139 - deoxyribose-phosphate aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0009264 - deoxyribonucleotide catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribose-phosphate aldolase"
                     /protein_id="HJN05345.1"
                     /translation="MTTIKNNNEIIIPDFRNTPLIDQVGTEERVSRFTKRSIKNEAKE
                     AGLKMVLSMIDLTTLEGEDTEGKVKQMCYKAWHLHDSVPDLPTVAAVCVYPSLVSVAK
                     KELTGTGIKVASVATAFPAGQTPLKVKIADTQFAIDQGADEVDMVISRGRFHSGDYNY
                     VFDEIATIKNICQDIRLKVILETGELGALDKVRRASDIAMFAGADFIKTSTGKIKPAA
                     TMSVTLIMLEAIRDYHEKTGIMVGMKPAGGISNSKLALHYLIMVKEVLGDTWLTNQWF
                     RFGASSLANDVLKQIVKLRTGRYQSNDYFSKD"
     gene            1224..2807
                     /locus_tag="QF480_01915"
     CDS             1224..2807
                     /locus_tag="QF480_01915"
                     /EC_number="3.5.1.4"
                     /inference="COORDINATES: protein motif:HMM:NF006006.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HJN05346.1"
                     /translation="MNYIKIILIIVLFLQISCYAPMSESQNTGSDNFRFLEQDIGQIQ
                     QGYKDGNYTVKELIQAYLDRIEAIDKSGPAINSIIQVNPDAIKIAEELDKEINDGKIR
                     GPLHGIPIMLKDNIDTHDGMATTAGSRALMNSYPLKDSYIAKLLREAGAVIIGKANLS
                     EWANFRGELSSSGWSGVGGQTKNPYDLSRNPCGSSSGSAVAVSANLTVLAIGTETNGS
                     IVCPSSSNGIVGIKPTVGLLSRSGIIPISFTQDTPGPMARTLKDAVICLGALVGIDSA
                     DEKTWDSHGKYYKDYTQFLREDGLEGKRIGLYKAPFGINYKVDSLMYQAVNFLKNKGV
                     EIIEIDKIYDDEVDNYSFEIMLFEYKDGLNNYFRSLGPDAPIKSLEELIAFNKSDSIE
                     LEYYNQKYLEMAQQKGDLSSKEYQSALADMLVGSREEGLDRVMDKHNLDAIIAPTGSP
                     AWKTDWVNGDSYVLGSSSPAAQSGYPNITIPMGYVDELPVGLSFFGRAWSEPVLIEIT
                     SAYEFGTKHRKVPKFLISN"
BASE COUNT          964 a          511 c          546 g          923 t
ORIGIN      
        1 ccttttttaa tcttttgaaa aataatcatt cgactggtat cttcctgtcc tcaatttcac
       61 aatttgtttc aacacatcgt tggctaagct gcttgctcca aatctgaacc attgattggt
      121 taaccaagta tctcccaaaa cttcttttac cattatcaaa tagtgcaagg ccagttttga
      181 gttagatatt cctccggctg gtttcatgcc aaccataatt ccggtttttt catgataatc
      241 ccgaattgct tcaagcatta taagagtaac agacattgtt gcagctggtt taatctttcc
      301 tgtagaagtt ttaatgaaat cagctcctgc aaacatagca atatcactgg ctcttcgtac
      361 tttgtcgagt gctcctaatt caccggtttc cagtattact tttagtctaa tatcctgaca
      421 aatattctta atcgtagcaa tctcatcaaa aacatagttg taatcacctg aatggaatct
      481 gcctctggag ataaccatgt caacttcgtc agctccctga tcaatagcaa attgtgtgtc
      541 agctattttt actttcaagg gtgtttgtcc ggctgggaaa gcagtagcta ctgatgccac
      601 ttttattccg gtgccggtca attccttttt tgccacactt accagcgatg ggtaaacaca
      661 cacagctgcg acagttggaa gatcggggac agaatcatgt aagtgccatg ctttgtagca
      721 catctgcttt actttacctt ccgtatcttc accctccaaa gtggtaaggt caatcatact
      781 gagaaccatt ttcaatccag cttcttttgc ttcattttta atacttcgct tggtgaatct
      841 actaacacgc tcctccgttc cgacttgatc gataagtggc gtatttctaa aatcaggaat
      901 tattatctcg ttattatttt ttattgttgt caattgcttt agccttatta agaaacaaat
      961 tcagtaagta ataaacttgc tatttagtga tcaacattaa gctacaaatc tcagcataaa
     1021 aaacgtataa tgcaaggaaa aacattaatg acctcaatat cctcacttag taaaatatgt
     1081 ctaaattttt aaaaactcat gaggataata gcttaaagat tttaggaaaa ataggtctta
     1141 gtgagtatat ttgcaaggca aggcataaat acaaaagttc aaagatggaa attcgaagga
     1201 aagtcacaca aaaaaattac ttattgaatt atattaagat tattctgata atagtcctat
     1261 ttcttcaaat ttcttgttat gctcccatga gtgaatctca gaatacagga tcggataatt
     1321 ttagatttct agagcaggat ataggtcaaa ttcaacaagg atataaagac ggtaactaca
     1381 ctgttaaaga gttaatccaa gcctatttag acagaattga ggcaattgac aaaagtggtc
     1441 ctgcaattaa ttcaattatt caagtaaatc ctgatgccat aaaaattgca gaagagttag
     1501 acaaagaaat taatgacgga aaaatacgag gacctcttca tggcattcca ataatgctaa
     1561 aagataatat agacacacat gatggcatgg caacaacagc tggttccagg gcattgatga
     1621 attcttatcc tttaaaggat agctatattg ctaaactcct aagagaagcc ggtgctgtga
     1681 taattggaaa ggcgaattta agtgagtggg ctaattttcg tggtgaatta tcttcaagtg
     1741 gttggagcgg tgttggtggt caaacaaaaa atccatatga tttgagtcgt aacccttgtg
     1801 gatcaagttc aggatcagca gttgcagtat ctgctaatct cacggtactt gcaattggta
     1861 ccgaaaccaa tggttccatt gtttgtcctt catccagcaa tggcatagtt ggaatcaaac
     1921 caactgttgg actcctaagt cgatccggta ttattccaat ttcctttact caagatactc
     1981 ctggcccaat ggcacgaaca ttaaaagacg cagtaatttg tttgggagca ttagttggta
     2041 tagactctgc agatgaaaaa acctgggata gccatgggaa atactataag gattacacac
     2101 aattcttaag ggaagatgga ttagaaggca agagaattgg attatacaaa gctccttttg
     2161 ggataaatta taaggttgat agtttaatgt atcaggcagt gaattttcta aaaaacaaag
     2221 gagtagaaat tatcgagata gataaaattt acgatgatga agtcgataat tattcattcg
     2281 aaatcatgtt atttgaatat aaagatgggt tgaataatta ttttagatct ttaggacctg
     2341 atgctccaat aaaaagttta gaggaactta tagcttttaa caagtctgat tcgatagaat
     2401 tagaatatta caatcagaaa tatttggaga tggctcagca aaaaggtgat ctgtcctcta
     2461 aggagtatca gagtgcacta gctgacatgc ttgtaggaag tagagaagaa ggattagaca
     2521 gggtaatgga taaacataat ctagatgcaa taattgcccc aacaggaagt cctgcctgga
     2581 aaacagattg ggttaatggc gatagttatg ttttgggaag ttcatctcct gctgcccagt
     2641 ccggatatcc aaatattaca atacccatgg gttatgtaga tgagttaccg gttggattat
     2701 ctttttttgg tagagcctgg agtgaacctg tattaattga gataaccagt gcatatgagt
     2761 ttggaaccaa gcatcgcaaa gtcccaaaat ttctgatatc taattaactt gatatttatt
     2821 gaacaaaaac taattattat aaaatcagaa ggacgcctat tatgtctttt cctttgtcac
     2881 ataattatat ttggcttgaa attaacaatc aaaaaattaa acaaatgaaa aaaatttctt
     2941 tact
//
LOCUS       DASCQP010000112         6147 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000494568, whole genome shotgun sequence.
ACCESSION   DASCQP010000112 DASCQP010000000
VERSION     DASCQP010000112.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 6147)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6147)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6147
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000494568"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..3184)
                     /locus_tag="QF480_01920"
     CDS             complement(<1..3184)
                     /locus_tag="QF480_01920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05347.1"
                     /translation="MKKILRACMIVFVSVVFLNQLTAEKYIGDKTKQGSNLKETTAGC
                     SPASAYDWLDINNARARINAGGDMWWDLDGLGKYFIPNEGTATSMFASALWIGGLDIN
                     NQLKLAAQRYRQVGIDYWTGPLTIDGTASIDETVCAQYDEFFKITRAQVDEFLSHTDP
                     IDGHFIPSADYNIPPAILDWPAHGDVSQGQSYYLAPFYDVLGDGEYDPYAGDYPYYDI
                     TNELCHTETPTMEQEFEGTVTGSILADQIIKGDQTLWWVFNDKGNIHTETSGSAIGME
                     IRAQAFAFATNDVINNMTFYSYEIINRSTFELTQTYFCPWMDPDLGYAYDDFVGCDVG
                     RGLGYCYNGVAIDGSGTPETYGAQPPAIGVDFFQGPYMDPDGYDNPSFAGDSTAGPSF
                     GGSCDIVTQNGGLRNMVYLPDGIPQSIPTIVRSAAINGVNFGNGIVDDERYGMRRFVF
                     HNNSSGNMGDPQNAPQYYNYLKGIWKDNTIMEYGGTGHVSGAGTVGPPCDFMFPGDSD
                     PCNWGTQGTPPNGGFNQNGFYWTEETGDNGAPNPPADRRFMQSAGPFTLKPGAVNYIT
                     VGIPWARAQVGGPWASVELLRVVDDKCQALFDNCFKVIDGPTAPDLTLIELDRKLIVY
                     ITNSATSNNYLEKYREFDPNIIQPLPGSDPPVPSDAWYRFEGYQIFQLKGPTVSVDNI
                     HDPDLARLVAQFDLQNGITKIVNYEYNDYIGANVPIVEVDGGDNGISHSFELSQDAFA
                     TGDVRLVNNKQYYYLALAYAYNNYLPFGMDFPNSSGQTHAYLSGRKNISMYTGMPHFT
                     VNGTVLNSEYGNSPQITRIAGNGNGGMNLDFTQETIDEILSKPPADSINIFGSPDYPI
                     AYNPVYKINSGPLNVEIIDPLSVVNADYRWWMDTLIRVQVTHVTDDPLVEGDTTSKLV
                     GNWKLENLTTGEIHKSDTTIMDEYEQLFIDLGFSINIEQPFIPGPIGIGEIDSDPYLE
                     ILAPNNGMIESNITYADSSHRWLSGVSDVDLPGYPLDWIRSGTYQSGAFPGTNDWNMS
                     ASPFNPWDPNSAYANILTGTWAPYCMTASGN"
     gene            complement(3236..>6147)
                     /locus_tag="QF480_01925"
     CDS             complement(3236..>6147)
                     /locus_tag="QF480_01925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05348.1"
                     /translation="FFIAGDINLNQDGRPSATGFYSLTPENLQLLEDNPVRPSGTGAG
                     TFINGAFLRNSDLQHVKTAPNTARQSYNFIGNINIRTTETINLTVGGSYNYYNGRDYN
                     YSATLANWDKNILRKTTTYRGYVRFTQRFPTAVESTSVFKNFYYSLQFDYTKYKGETG
                     DANHWNNLFKYGYIGKFTTYKTPTFELDTAYVNGHHYENVWVLNSWDFDTLVDWSARD
                     INPLLAKYTTDYYSIYEGMPEGHYQNIDDILLGQGLINGSTPQNIYTLYQSPGTNQSG
                     YNKYNNDQYNMRMDASLDIGNHGIKIGFQYEQRTNRFINYAPTGFWNLVRDGRGLTNF
                     HLRELDTEHPELISHNGYPDTVIYRRKYDANSQRTFDKNLREAMGLPVDGLDYIVMDS
                     YDYDDGSIDYYDKNGNMHSVNLAPDALNVSLFSPDELWNDGLSAINYAGYDYQGNVLT
                     TQPAYADFFNKTDANGEYTRDIGAFQPIYMAGYIQDQFAFKDLIFNVGVRIDRFDANQ
                     KVLEDPFVLYPTHDVSNINTVPGFENVTHPSSMGDDFVVYVNKVKDPEYVVGYRHEYT
                     WYNADGIEILDPTILDVGNGIAPALLDQDQSQVTISSFKDYDPQINVMPRISFSFPIS
                     DEALFFAHYDVLTQRPTSNVFSNPSSYYFFNNIGGRLNNPSLEPTKTIDYELGFTQKV
                     SNTSSVTFTTFYREMRSMIQIYRFNGAYPKDYTSYNNLDFGTVKGLTAEYDLRRTGNV
                     RVRAYYTLQFADATGASTTTAASLVAAGLPNLRSTFPLPWDRRHAFNIVIDYRYGSGS
                     NYNGPRINRNKSGKAPIEPLSNLGFSLTINGGSGTPYTASREVNSRLSGGTRLLKGTY
                     GGSRLPWQFRLDLRVDKDFYFKLKKDAGDNAKGAYLNVYLQVLNLLNTKNIINVYPYT
                     GNPDDDGYLTAPEWQRQINNQLDPMSFRDLYGNFIDNPANYSSPRQIRLGLTFNF"
BASE COUNT         1898 a         1232 c         1100 g         1917 t
ORIGIN      
        1 tgttaccgga agctgtcata caatatggag cccaggttcc agtaagaatg tttgcatacg
       61 ctgaattagg atcccatggg ttaaatggtg aagctgacat attccaatcg ttcgttccag
      121 gaaacgcacc gctctgatat gtgcctgatc ttatccagtc aagtggatat cctggcaaat
      181 caacatcact aacaccgctt agccacctgt gtgaactatc tgcatatgta atattagatt
      241 ctatcattcc gttatttgga gcaagtattt ctaaatatgg gtcactatct atttctccaa
      301 tccctattgg gcctgggata aaaggttgtt caatatttat tgagaatcca agatcgataa
      361 acagttgttc gtattcatcc attatagttg tgtcgctctt gtgaatttca ccagttgtca
      421 aattttctaa tttccagtta cccacaagtt tacttgttgt atcaccctca acaagagggt
      481 cgtcagtcac gtgtgtaact tgaactcgga ttagtgtatc catccaccat ctataatcag
      541 cattaacaac acttaatggg tcaataattt caacatttaa tggccctgag tttattttgt
      601 aaaccgggtt atacgcaata ggataatcag gtgaaccaaa tatattaatt gaatctgctg
      661 gaggttttga taatatttca tcaatggttt cctgggtgaa atcaagattc atacctccat
      721 taccgttacc tgcaattcta gtaatttgcg gactatttcc atattcagaa ttaagcactg
      781 taccattaac agtaaagtgt ggcatgcctg tgtacatact aatatttttt cttcctgata
      841 aatacgcgtg tgtctgtcca ctactatttg gaaagtccat tccgaaagga agataattat
      901 tatacgcata tgcaagagcc agataataat attgtttatt atttaccagt cgaacatcac
      961 ctgttgcaaa agcatcctgt gataactcaa atgagtgact aataccattg tcaccaccat
     1021 caacctctac tatcggtaca tttgcaccaa tatagtcgtt atattcgtag ttaactattt
     1081 ttgtaatacc attctgtaag tcaaactgtg ctactaagcg agcgaggtcc ggatcgtgaa
     1141 tattatcaac actaaccgta ggtcctttta actggaaaat ttgatatcct tcaaaccgat
     1201 accatgcatc gcttggaaca ggtgggtcac ttccgggcag tggttgtata atatttgggt
     1261 caaactctct atatttctca agatagttat tcgatgttgc agagttagta atatatacaa
     1321 ttaatttcct gtcaagttcg atcaaagtta aatcaggtgc agtaggtccg tcaattacct
     1381 taaaacagtt atcaaataat gcctgacatt tgtcatcaac tactctaagc agttcaacag
     1441 aagcccaggg gcctcctacc tgagctcttg cccatggaat accaacggta atatagttaa
     1501 cagcaccagg cttaagagta aatggtccag ctgattgcat aaaacgcctg tccgcaggtg
     1561 gatttggcgc tccattatca ccagtttcct cagtccagta aaatccgttt tgattaaatc
     1621 caccattagg cggggtacct tgtgttcccc agttacatgg gtcactatct cccgggaaca
     1681 tgaagtcaca tggaggccca acagttcctg ctccagaaac atgccctgtt ccaccatatt
     1741 ccattatagt attatctttc caaattcctt ttaaataatt ataatattgg ggtgcatttt
     1801 gaggatcgcc catgtttcct gagctattat tatggaacac aaacctccgc ataccataac
     1861 gttcgtcatc tactatacca ttaccaaagt taacaccatt aatagcagcc gaccgtacaa
     1921 tggttggaat agattgtgga ataccgtcag gtagataaac catattacga aggccaccat
     1981 tttgcgttac tatgtcgcaa ctaccaccaa aggatggccc tgcagtactg tcaccagcaa
     2041 atgaaggatt gtcgtaacca tcaggatcca tatatggccc ttggaagaag tcaacaccaa
     2101 ttgcgggtgg ctgagcacca tacgtttcag gtgtaccact accatcaata gcaacaccat
     2161 tgtaacaata acccaaaccg cgaccaacat cacatccaac aaagtcatca taagcatatc
     2221 caaggtcagg atccatccat gggcaaaaat atgtttgggt aagctcaaat gttgaccggt
     2281 tgattatttc ataactgtaa aaagtcatgt tattaataac atcgtttgta gcaaaagcaa
     2341 atgcttgagc tcttatttcc ataccaatag ccgagcctga tgtttcagta tggatatttc
     2401 ctttatcatt aaatacccac caaagagtct ggtccccttt aataatctgg tcagcaagta
     2461 tactaccagt tacagtacct tcaaattctt gctccatagt tggagtttca gtatggcaaa
     2521 gctcgtttgt aatatcataa tatggataat cacctgcata tggatcgtat tcaccatctc
     2581 caagcacatc ataaaacgga gccaaataat aactttgtcc ttgtgataca tcaccatgag
     2641 caggccaatc aagtattgca ggtggaatat tataatctgc acttggtata aaatggccat
     2701 caataggatc ggtgtgtgat aagaattcat ctacctgagc cctagtaatc ttgaaaaatt
     2761 catcatattg ggcacaaaca gtttcatcta tagaagcagt tccatcaatc gtaagaggtc
     2821 cggtccaata atcaattcct acttgacgat atcgctgagc agcaagttta agctggttgt
     2881 taatgtcgag gccacctatc cataatgcac ttgcgaacat tgaggtggca gtcccttcat
     2941 tcgggataaa atatttgcca aggccatcaa gatcccacca catgtctcca ccagcgttta
     3001 tacgtgctct tgcattgttt atgtcaagcc aatcgtaagc tgaagccggt gaacaaccgg
     3061 ccgtagtttc tttcaggttg cttccctgct tcgttttatc accaatatat ttttcggcag
     3121 taagctgatt caaaaacaca actgaaacaa aaacgatcat acaggctcgt agtattttct
     3181 tcatgatgct tatatttttt actttctaaa tttaatttat cagtattgtt taatcttaaa
     3241 agttaaatgt tagtccaaga cgtatttgac gaggtgaact ataattagct ggattatcaa
     3301 tgaaattgcc atataaatcc ctaaatgaca ttggatcaag ttgattgttg atttggcgtt
     3361 gccattcagg ggctgttaga taaccatcat catccggatt accggtatat ggataaacat
     3421 ttataatatt ttttgtgtta agcaggttta gtacctgtaa ataaacattt aaatatgcac
     3481 ctttggcatt gtctccagca tcttttttca gcttaaaata gaaatcttta tcaactctca
     3541 ggtctaatct gaattgccat ggcagtcttg aaccaccata agtacctttc agaagtcgag
     3601 tgccgccaga taaacgagaa ttgacttccc tggaggctgt atatggtgtt cctgaaccac
     3661 cattaattgt caaactaaat cctaaattgc ttaaaggttc tataggtgct ttgcctgatt
     3721 tgttacgatt aatcctggga ccattataat ttgaacctga gccataacga taatcaataa
     3781 caatattaaa cgcatgtctt ctatcccatg gcaatgggaa agtagatcgt aggttaggta
     3841 atcctgctgc aactagagaa gctgctgtag ttgtcgaagc accagttgca tcagcaaatt
     3901 gtaatgtata atacgctctt acacgcacat ttccggtacg acgaaggtcg tattcagcag
     3961 taagaccttt aactgttcca aagtcaagat tattatatga agtatagtcc tttggatatg
     4021 ctccattaaa acggtatatt tggatcatac ttctcatttc acgataaaat gttgtaaatg
     4081 tgacagaaga agtatttgac accttttgag taaatcctaa ctcataatca atagtttttg
     4141 taggttctag agatggatta ttcaatctcc caccaatgtt attaaagaaa taataagaag
     4201 agggattaga aaagacatta cttgttggtc tttgtgttag aacatcataa tgtgcaaaga
     4261 ataacgcttc atcagaaatt gggaatgaaa acgaaattcg tggcatcaca ttaatctgtg
     4321 gatcataatc tttaaaagag cttattgtta cctgcgattg atcctgatca agtaatgctg
     4381 gtgcaattcc gttaccaaca tctaagatag taggatcaag aatttcaata ccatcggcat
     4441 tataccaagt atactcatgt cgataaccaa caacatattc tggatcttta accttattaa
     4501 cataaactac aaaatcatcg cccatacttg aagggtgcgt tacattttca aatcctggga
     4561 cagtattaat attagaaaca tcatgcgtag gatacagcac gaatggatct tccaatacct
     4621 tttggttagc atcaaatcta tcaatacgaa cacctacatt aaaaataagg tctttaaatg
     4681 caaactgatc ctggatataa ccagccatat aaattggttg aaaggcacca atatctcgag
     4741 tatattctcc gtttgcatca gttttgttaa aaaagtcggc gtaagcaggt tgggttgtta
     4801 atacatttcc ctgataatca taacctgcat aattaattgc agaaagccca tcattccaaa
     4861 gttcatcagg tgaaaagagg ctaacgttta atgcatcagg agcaaggtta acagagtgca
     4921 tattaccatt tttatcataa taatcgattg agccatcatc ataatcgtat gaatccatca
     4981 caatgtaatc gagtccatca acaggtaaac ccattgcttc ccttaaattt ttgtcgaaag
     5041 tgcgttgtga attggcatca tactttcttc tatagataac agtatcaggg taaccattgt
     5101 gtgaaataag ctcaggatgt tctgtatcaa gttcccgcaa atgaaagttt gtaagtcctc
     5161 taccgtcacg tacaaggttc caaaaaccgg taggggcata gttgataaat ctgttagtgc
     5221 gttgctcata ttgaaaacct attttaatac catgatttcc aatatcgagt gacgcatcca
     5281 ttctcatgtt gtactgatcg ttgttatatt tattataacc tgactgatta gttcctggtg
     5341 attgatacaa cgtataaata ttctgaggag tactcccatt tattagaccc tgaccaagaa
     5401 gtatatcatc aatattttga taatggcctt caggcatgcc ttcatatata ctataataat
     5461 cagtagtgta ttttgccaag agaggattta tatctcgtgc actccaatca acgagtgtgt
     5521 caaaatccca tgaattaagc acccaaacat tttcataatg gtgaccatta acataagcag
     5581 tatctaattc aaaagtaggg gttttatatg ttgtgaactt tccaatatat ccatatttaa
     5641 aaaggttatt ccaatgattt gcatcaccgg tttcaccctt gtattttgta taatcaaact
     5701 gtaaagaata ataaaagttc ttgaaaaccg aagtgctttc aactgccgtt ggaaaacgtt
     5761 gtgtaaatct aacataacca cggtatgtag tggtttttct gagtatgttt ttatcccagt
     5821 ttgcaagtgt tgcgctgtag ttataatctc gcccattata ataattatag cttccgccta
     5881 cagtaagatt tatagtttcg gttgtgcgta tgtttatatt accaataaag ttataactct
     5941 ggcgagctgt atttggagcc gttttaacgt gttgcaggtc gctatttctt aaaaatgctc
     6001 cattgataaa ggtaccagca cctgtacctg agggtctgac tggattgtct tctagaagct
     6061 gcaagttttc aggggtaagg gaataaaaac cagtagcaga aggtcttcca tcttggttta
     6121 aattaatatc accagcgata aaaaatc
//
LOCUS       DASCQP010000113         3872 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000496465, whole genome shotgun sequence.
ACCESSION   DASCQP010000113 DASCQP010000000
VERSION     DASCQP010000113.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3872)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3872)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3872
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000496465"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1284
                     /locus_tag="QF480_01930"
     CDS             <1..1284
                     /locus_tag="QF480_01930"
                     /EC_number="3.4.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF015536.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016805 - dipeptidase activity [Evidence
                     IEA];
                     GO_function: GO:0070004 - cysteine-type exopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C69 family dipeptidase"
                     /protein_id="HJN05349.1"
                     /translation="QSYALKCTREYGNQIMTIKQTQIFVLPRYKTAREAVQFIGDLMI
                     KYGFLPSSGDGSETLVIADTEEIWVFEVFGVGPGWTPESGKPGAIWAAQRLPEDEATM
                     IPNWSIIKEINEKDIENFMVSKNYKSEAIDRGWYNPSSGMPFIWQEAYTPIPVEYATS
                     RFWLFHQTFAPNYREWPDRFPNGDPYKGISPYFQLVEPLSIYPFSVKPEELISVRDVI
                     AFQRSTYEGTIYDMTSGPEWLVPDNKGGYVKSPLATPFPSRDLRKLMKITYRRPVARH
                     RGHYGMVIQLRDWLPDDIGGVYWVYLDNPYFSPYVPIYAGNLSIHDTYKTYDPNKYDE
                     NSARWVIDFVDNLANLKFQKIAEDVKTVRTPFEDEIFKNQKAVEDEALKLYKKSPKDA
                     QEYLTDYSNGLMYDVTTMFINLRNEIITNYTNNHE"
     gene            complement(1301..3376)
                     /locus_tag="QF480_01935"
     CDS             complement(1301..3376)
                     /locus_tag="QF480_01935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05350.1"
                     /translation="MRKSTIETLGLGTVLEIFKKHQLPVTTSKLVEQVFGPENNRGSL
                     VISGANGIVGAGKAMQLGSRLEAFGVPIVGLDFPGSPDGIGMQYPGLVNAFGQENAQK
                     IMANIIRLNYDGKSLPKELRELKPKFLLEAIPEILEVKKDHYKLFRDNYPGVEIRSVT
                     SGFPSSELGVGIAHPAFPHEINKVWEIVENEPSDITKLLWSIGLIPIQVSDNWSFVLD
                     VLFCGVTLAGLRYHQATNMPYWKIDKFIRKFIGPNPLRAHDVIGAKGANFLTWSCLHH
                     LGNFYGDLFFPTPDLTERKDSGQNWYPPDHFRPIVNWKIDDNESADFLSWTLGALFQM
                     TSIMLHEKRGSLANINAIGELCAQFRNGIIATIRGAGTENALKIVEAYHKLYPEADNS
                     PWYPEEFEKMGEPEWQQLYVNAEHDGKTGVITISRESYNSDVDIELNRAIDWLKNEGI
                     QGVIVTGDFHLATQMVGADTNEFFPALENADEGDRIASTWSKTARRLHTEFKVSVGYI
                     NGKRCMGGFLELLMHCHYLVATNGVKLGMPEVTLPVVPGMEGCHWPFRKAKPEDWPKL
                     FKLLLIGNQVKAEDTIGWLCDFTGTQEEALEMAWNLANEDNHGLTLRTVDDKAITGIP
                     SDVQLPAPDNAGMKAARKAIMDTIQDSCDVPIGEALSIQSRHSANFMITNHCKKGAIG
                     AAFNQVMNV"
     gene            complement(3388..>3872)
                     /locus_tag="QF480_01940"
     CDS             complement(3388..>3872)
                     /locus_tag="QF480_01940"
                     /inference="COORDINATES: protein motif:HMM:NF014820.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05351.1"
                     /translation="CITPGTQTHAADGMATLLVTGKEKAKQLSSRPEIDIQFVGKTEL
                     RVAPSYMPEAPALAVKKLLDRTGLTMDDMAVVKNHNPFAVNDVIFAKVMNYDWHKMNN
                     TGCSLVFGHPQGPTLTRLVIEALEEAVNLGGGYVLVFGCAAGDVGIASIFKVTEGGKK
                     "
BASE COUNT         1144 a          815 c          710 g         1203 t
ORIGIN      
        1 caaagttatg cgcttaaatg tacccgggag tatggaaacc aaattatgac aattaaacag
       61 acacagatat ttgtcttgcc acgttataaa actgccagag aagctgttca atttattgga
      121 gatttaatga taaaatacgg ttttttaccg tcaagcggag atggctccga aacgcttgtt
      181 atagctgata cggaagaaat atgggttttt gaggtttttg gtgttggtcc tggttggact
      241 ccggaaagtg gaaaacctgg tgcgatttgg gcggctcaaa ggctaccgga agatgaagct
      301 acaatgattc caaactggag tattataaag gaaatcaacg aaaaagatat tgaaaatttt
      361 atggtatcca aaaactataa atcagaagca attgatcgtg ggtggtataa tccttcttca
      421 ggaatgccat ttatatggca agaagcctat actccaatac cagttgaata tgcaaccagc
      481 agattttggc ttttccatca aacttttgct cccaattata gagaatggcc agatcgcttt
      541 ccaaatggag atccatataa aggaattagt ccgtatttcc agcttgttga gcctttgtca
      601 atctatccat tttcagttaa acctgaagaa cttatatcgg tacgcgatgt aattgcattt
      661 cagcgttcaa cttacgaagg tactatttac gatatgactt ccggtcctga atggctagtt
      721 cctgacaata agggtggtta cgttaagagc ccactagcta ctccttttcc gagtagagat
      781 ttacgcaaac tgatgaaaat aacttatcgt cgtcctgttg cccggcatcg tggacattac
      841 ggaatggtga ttcagctccg agattggtta cctgatgaca tcggaggagt ttactgggta
      901 tatcttgata atccatattt tagtccttat gttccaattt atgcgggaaa tttgtcaatt
      961 catgatacat acaaaactta tgacccaaat aaatatgacg agaattctgc tcggtgggta
     1021 atagattttg tggataatct tgctaatcta aaattccaaa agattgcaga agatgtaaaa
     1081 acagtaagaa ctccttttga agatgagatt tttaagaatc aaaaagctgt tgaagatgag
     1141 gccttgaaat tatataaaaa aagtcccaaa gatgctcagg aatatttaac agattactcc
     1201 aacggattaa tgtatgatgt tactacaatg tttattaacc ttaggaatga gattattaca
     1261 aactacacta ataatcacga ataagttata atcattctag ctacacattc attacctgat
     1321 tgaaagcggc tcctatcgct ccttttttac agtgattcgt aatcatgaag ttagctgaat
     1381 gcctactttg tattgacaat gcttctccga ttggtacatc acatgaatct tgaatagtat
     1441 ccatgatcgc tttccttgct gctttcatac ctgcattatc gggagccggt agttgtacat
     1501 ctgaaggaat tccggttatc gctttatcat ctacagtacg tagcgtcaat ccatggttat
     1561 cttcatttgc aaggttccag gccatttcaa gagcttcttc ctgagtacct gtaaaatcac
     1621 atagccagcc aatagtatcc tctgctttta cttggtttcc aattagcaat aacttaaata
     1681 gtttaggcca gtcttcaggc tttgctttcc ggaatggcca atgacaccct tccatacctg
     1741 gaactacagg cagagttact tcaggcatac caagtttcac cccattagtt gcaactaaat
     1801 agtggcaatg cattagtagc tctaaaaatc cacccatgca acgctttcca ttaatataac
     1861 caacagaaac cttaaactca gtgtgcaatc tacgtgctgt ttttgaccat gtgctagcaa
     1921 ttctatctcc ttcatcagca ttctccaaag cagggaagaa ctcgttggta tcagcaccaa
     1981 ccatctgagt cgcaagatgg aaatcaccgg ttacaattac tccttgaata ccctcattct
     2041 taagccagtc gatagctcta ttaagttcaa tatctacatc gctgttatag ctttcacgac
     2101 ttattgtgat aacgccagtt ttaccatcat gctcagcatt aacgtaaagt tgttgccatt
     2161 caggctctcc cattttttca aactcttcag ggtaccaagg tgagttatca gcttcaggat
     2221 ataatttgtg ataagcctct actattttta atgcattttc ggttccggca cccctaattg
     2281 tagcaataat accgttacgg aattgggcac acagttctcc aatagcatta atattggcga
     2341 gactacctct cttttcatgt aacatgatac ttgtcatctg aaaaagagct cctaaggtcc
     2401 agcttaagaa atcggctgat tcgttatcgt caatcttcca gttaactatt ggcctgaaat
     2461 gatctggtgg ataccagttc tgcccactat ctttgcgctc tgtaagatcc ggagtaggga
     2521 aaaacaaatc accataaaaa ttaccaagat gatgtaaaca agaccacgta aggaagtttg
     2581 cgcctttcgc acctattaca tcgtgagctc gtaaaggatt tggacctata aatttcctaa
     2641 tgaatttatc gatcttccag taaggcatat tagttgcctg gtgatatctt agaccagcaa
     2701 gtgttactcc acaaaaaaga acatctaaca caaatgacca gttatcactt acctgaatag
     2761 gaataagtcc gattgaccat agaagttttg taatgtcaga tggttcattt tctactattt
     2821 cccatacttt gtttatctca tgtggaaaag caggatgggc aattcctact ccaagctccg
     2881 agctaggaaa tcctgatgtg accgaacgga tttcaacgcc tggataatta tcccgaaaga
     2941 gcttgtaatg atcctttttt acttcaagaa tttcaggaat tgcttccaat aggaattttg
     3001 gtttcaattc ccttagttct tttggaagac tcttgccgtc ataatttagt cggataatat
     3061 tagccattat cttttgagca ttctcttgcc caaatgcgtt aaccaaccca ggatattgca
     3121 tgccaatgcc atcagggctg ccaggaaaat ccagaccgac tattggtaca ccaaaagctt
     3181 ctaatcttga gccaagctgc atcgctttgc cagcacctac aataccattt gctcctgata
     3241 taacaagtga gccccgatta ttttctgggc caaatacttg ctcaacaagc ttacttgtcg
     3301 tgacaggcaa ttggtgtttt ttaaaaatct caaggactgt tcccaatcct aatgtttcta
     3361 tagttgattt cctcatagat tttatcatca ctttttccct ccctctgtta ctttaaaaat
     3421 gcttgctata ccaacatcac cagcagcaca accaaagact aaaacatagc ctcctccaag
     3481 attaacagct tcttctaaag cttcgatcac taatcgtgtt agtgtaggtc cctgtgggtg
     3541 tccaaatact aatgagcatc cggtattatt cattttgtgc caatcataat tcattacttt
     3601 agcaaaaata acatcgttaa ctgcaaaggg gttatggttt ttcactactg ccatatcatc
     3661 cattgttaaa ccagtacggt cgagaagctt cttaacagca agagccggag cttcaggcat
     3721 atagctagga gctactctta gttctgtctt tcctacaaat tggatatcta tctccggtct
     3781 gctactaagc tgcttagctt tttcttttcc ggtgacaagt aatgttgcca ttccatcagc
     3841 agcatgagtt tgtgtaccag gtgtaataca tg
//
LOCUS       DASCQP010000114         1578 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000506324, whole genome shotgun sequence.
ACCESSION   DASCQP010000114 DASCQP010000000
VERSION     DASCQP010000114.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1578)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1578)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1578
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000506324"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1474)
                     /locus_tag="QF480_01945"
     CDS             complement(<1..1474)
                     /locus_tag="QF480_01945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018965208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide MFS transporter"
                     /protein_id="HJN05352.1"
                     /translation="MFKGHPKGLIPASLANMGERFGFYTMMAILVLFLQAKFGLSGTN
                     AGYIYAAFYFSIYILSLVGGIIADRIKNYKGTILVGLVLMAFGYVIMAIPTPTPVSNV
                     PLFLSISIVGLFVIAFGNGLFKGNLQALVGQMYDNEKFGAKRDSGFSLFYAFINVGAI
                     FAPFTAVGIRNWWLKSHGYTYDASLPEQCHTYLGGSMTADNATKFDEYAAAASDIPVT
                     DLTAFSNDYLNVFNTGFHYAFGIAIIAMIISTVIYLMNRKKFPDPQGVKTATGEITKE
                     VKMEAKEVAQRMYALLAVFGVVIFFWFSFHQNGLTLTFFARDYTVLQFGSWNFAAEIF
                     QSMNPFFVVFLTPIIVALFGWLHARGIEPSTPKKIAIGMGIASSAFVLMMIGSFGLPL
                     LAEISPRLGGTPLVDSEKVTPFLLLGTYFILTVAELFISPMGISFVSKVSPPQYQGLM
                     QGGWLGATALGNGLLFIGAILYDSIPIWMTWGIFVIATAIS"
BASE COUNT          560 a          296 c          261 g          461 t
ORIGIN      
        1 tagaaatagc agtagctata acaaaaatac cccaagtcat ccaaattgga attgaatcat
       61 aaagtatagc accaataaat aaaagtccgt ttcctagtgc tgttgcgcca agccatccac
      121 cttgcattaa tccttggtat tgtggaggac ttacttttga gacaaatgaa atacccattg
      181 gactgataaa taactcagca acagttaaga tgaaatatgt tcctaataat aggaaaggag
      241 ttactttttc tgaatcaact aatggagttc caccaagtct tggactaatt tctgccaata
      301 acggaagacc aaatgaaccg atcatcatca gcacgaacgc tgaacttgca atacccatgc
      361 ctatagcaat tttcttaggt gttgatggtt caatacctct tgcatgtaac cacccaaaaa
      421 gagcaacaat aataggggtt agaaatacca caaagaaagg attcatagat tggaatattt
      481 cagcagcgaa gttccaagat ccaaattgta gcactgtgta atctcttgca aagaacgtaa
      541 gtgttaatcc attttggtgg aatgaaaacc agaagaaaat aacgactcca aaaactgcaa
      601 gtaaagcata cattcgttga gcaacttctt ttgcttccat tttaacttcc ttagtaattt
      661 caccagtagc tgttttaaca ccttgtggat caggaaattt ctttctattc atcaaatata
      721 taactgttga tattatcatt gcaatgatag caattccgaa ggcataatgg aatcctgtat
      781 taaatacatt taggtaatcg ttagaaaatg cagttaagtc agtaaccggt atatctgaag
      841 cagcagcagc atattcatca aatttggttg cattatcagc tgtcatacta cctccaagat
      901 aagtatgaca ttgttccggt aaacttgcat catatgtgta tccatgtgat ttcagccacc
      961 agtttcttat tccgaccgca gtaaagggag caaaaatggc acctacatta ataaaagcat
     1021 agaataatga aaatccagaa tctctctttg ctccaaactt ttcattatca tacatctgtc
     1081 caactaatgc ttgaaggttt cctttaaata aaccgttacc aaaagcgatt acgaagagtc
     1141 caacgattga aatgcttagg aataaaggaa catttgagac aggggttggt gttggaattg
     1201 ccattataac atacccaaat gccattaata ctaatccgac tagaattgtt cctttataat
     1261 ttttaattct atctgcgata ataccaccaa ctaaagaaag tatataaatt gaaaagtaaa
     1321 atgcagcata gatatacccg gcatttgtac cgcttaagcc aaacttagct tgtaaaaaca
     1381 atacgagtat cgccatcatt gtataaaatc caaaacgttc ccccatattg gcgagcgacg
     1441 ctggaataag tcccttaggg tgacctttaa acataattat tgattttggt taaacataaa
     1501 ttttcagtaa gccgacaaaa atagtgaaat ttgtttgcga aacaagtttt aagattttat
     1561 tgataataac aattaaca
//
LOCUS       DASCQP010000115         1996 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000509571, whole genome shotgun sequence.
ACCESSION   DASCQP010000115 DASCQP010000000
VERSION     DASCQP010000115.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1996)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1996)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1996
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000509571"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            257..1486
                     /locus_tag="QF480_01950"
     CDS             257..1486
                     /locus_tag="QF480_01950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005679952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HJN05353.1"
                     /translation="MLNKRKIFNDPVYGFVTVPNELIFDIIEHQYFQRLRRIKQLGLT
                     HLVYPGALHTRFQHSIGAMHLMIKAINELKFKGHDISDEESLGVYIAILLHDIGHGPY
                     SHSLEHSIVVGINHEQISRIFMDRLNCSFNGKLDIALSIFKGEYKKKFLHKLVSGQFD
                     MDRLDYLKRDSFFTGVSEGIVNYERLLNMLNVVDDELVIEAKGIYSVEKFIAARRLMY
                     WQVYLHKTVLVAEFTIMKVLKRAKQLRLNGIELFATPAFDFFLRNKITINEFENNREV
                     LENFTRLDDYDIFTSMKVWTTHSDPILSRLSSSIINRRLPKVEIQNEPFDNEFVENIK
                     KETMLELKLEEDEIDYFVINDKTSNFTYKIGTDKIGILNKNGMVMDIAEASDQLNISL
                     LSKPTTKYFLCYPKEIN"
     gene            1663..>1996
                     /locus_tag="QF480_01955"
     CDS             1663..>1996
                     /locus_tag="QF480_01955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05354.1"
                     /translation="MLRNKFLFIVIIVLLVFAAVIWYLYNNFGKVDGNPWDMIPDNAG
                     LIIEIDKPSDIYNKLENNPIWQRLLEVQDIENFNGEISWIDSLISNKTDYSKLFWNSP
                     LIFTFYSDS"
BASE COUNT          689 a          280 c          332 g          695 t
ORIGIN      
        1 ttcagcattt ctatttcatc gtcagcccat agtattctaa tactactcat atttatgttt
       61 ttactttaat tcaattaaat ttgtaactgt ttttatgtgt ttttgatttt tagtccacct
      121 ttcgcatact ctttagctat agtggaggcg caagttggat taatttagct ttaataatat
      181 aatgataaaa tgatataatt attgttcaaa ttaacatcat aatattacaa aattaacaat
      241 ttttatgagg ggtaaaatat taaacaaacg gaagatattc aacgatccgg tatacggttt
      301 tgttactgta cctaacgaat tgatatttga tataattgaa catcagtact ttcagcggtt
      361 gaggcgaatt aaacagttag gattaacaca tcttgtttac ccgggtgcac tacatactag
      421 atttcagcat tcgataggag caatgcacct tatgattaaa gctataaatg aactcaaatt
      481 taagggacat gatatttctg atgaagaatc tttaggtgta tatattgcaa ttttattaca
      541 tgatattggg catggcccat attcccactc actcgagcac tcaattgttg ttggtatcaa
      601 tcacgagcaa atctcaagaa tatttatgga tcgattaaat tgtagtttta atgggaaact
      661 tgatattgcc cttagtatat tcaaaggtga gtacaaaaaa aagtttttac ataaactagt
      721 ttctggacag tttgatatgg acagactcga ctatctaaaa cgcgacagtt tttttactgg
      781 cgtttcagag gggatcgtta attatgaacg actattaaat atgttaaatg tggtagatga
      841 tgaattggta attgaagcaa agggaattta ttcggttgaa aagttcattg ctgcccgtcg
      901 gttaatgtat tggcaagtat atcttcacaa aacggtactt gttgccgaat ttacaatcat
      961 gaaggtgtta aaaagagcaa aacaattgag gttaaatgga atagaattat ttgctactcc
     1021 tgcattcgac ttttttctaa gaaataaaat tacaatcaat gaatttgaaa ataatagaga
     1081 agtacttgaa aactttacaa gacttgatga ttatgacata tttacatcaa tgaaggtttg
     1141 gacaacacat tcggatccaa tcctatctcg attgagtagc agtattatta atcgtcgttt
     1201 accaaaggtt gaaattcaga acgaaccatt tgataacgaa tttgttgaaa acattaagaa
     1261 ggagacaatg cttgaactta aactagagga agacgaaatt gactattttg ttattaatga
     1321 taaaacatca aactttactt ataagatcgg tacagataaa attggaattc ttaacaaaaa
     1381 tggtatggtt atggatattg ctgaagcttc tgatcaatta aatatatcct tgttatccaa
     1441 acccactaca aaatattttt tatgctaccc caaagaaatt aattagaggt aatcccattc
     1501 attataatga agctaatgca ttttctaatc ctggcctttt ttcggttttt gaaacccata
     1561 tagcaataac attaattaac atgtaagtgt tagctttaca tattcctgta gaataataac
     1621 ttagtgtttt aacataactt tgttacataa aatgttgagt tgatgttgag aaacaagttt
     1681 ctttttattg taataattgt attattagta tttgctgctg ttatttggta tttatacaac
     1741 aactttggaa aagttgatgg taatccatgg gatatgattc ctgataatgc aggactaatc
     1801 atcgagatcg acaaaccatc agatatttat aacaaactag aaaacaatcc aatttggcaa
     1861 agattgttag aggttcagga tattgagaat tttaatggag aaatttcatg gatcgactct
     1921 ttgatcagta ataaaactga ttactcaaag ttgttttgga acagtccatt aatatttaca
     1981 ttttattccg actcaa
//
LOCUS       DASCQP010000116         3091 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000515144, whole genome shotgun sequence.
ACCESSION   DASCQP010000116 DASCQP010000000
VERSION     DASCQP010000116.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3091)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3091)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3091
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000515144"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..395)
                     /locus_tag="QF480_01960"
     CDS             complement(<1..395)
                     /locus_tag="QF480_01960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018452611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HJN05355.1"
                     /translation="MTKQSRYMQRGVSASKEDVHAAVRNLDKGIFPNAFCKVIPDIIG
                     SDDNYCNVMHADGAGTKSSFAYIYWKETGDISVWKGIAQDAIVMNIDDLLCVGVTDDI
                     LISSTIGRNKNLIPGSVIAAIINGTEEFL"
     gene            complement(445..2898)
                     /locus_tag="QF480_01965"
     CDS             complement(445..2898)
                     /locus_tag="QF480_01965"
                     /inference="COORDINATES: protein motif:HMM:NF012894.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HJN05356.1"
                     /translation="MNKLFSGILLLGFLVLLPSLMHAQRNPAKSADEAFSKQQYSLAI
                     DKYKKAYSKVKKNKEEKNRITAQLAECYRLTGNYKRASASYKRLIKNDWDKRNPEIRL
                     HYANMLKIIGDYAAAIEQYNSYAERVPDDPRGRKGAETTALIEEWIENPSKYEITNIK
                     KINSREADFAPAYTTDNYNEIVFTSTREGATGKETDNWTAQNFSDLFVAKIDRKGEWS
                     EPVLFDATKKINTEANEGAAVFNSKFNTIYYTKCPNDQQKESGCQIYKARRTGRSWGE
                     PDMVDIASIDSMSTIGQPTVSEGELVIYFSANRRSGMGGKDIWVAYRDSKSEGFGRPM
                     NLGEVINTPGDEMFPFLRNDTTLFFASDGHGGMGGLDIFVTTIDTAGNWGKPRNLKYP
                     MNSTFDDFGIVFHPNDEYGFFSSNRKGTRGQEDIWYFIEPPLEFTISGTIKDDRTLMY
                     MSDVNVQLVGSSGLSVTTRTNDEGFYSFGKSQLEPNTMYEILVAKPNYFNKKGTFTTV
                     GVEFSKDFVKDFNLIPIPTEPIALPEILYDLAKWDLKPQYQDSLQDLIQTLRDNPNIV
                     VELASHTDLRDSHERNDILSQRRAQSVVNYLIIRGIEPARLVAKGYGERAPLPLKKDV
                     IRDGFLFSEGTILDEAYIESLLSNNEKEAAHQLNRRTEFRVLRKDYIPQSTNIDLATI
                     NIAINPEDNAIVFTEAPKSGTYVSSCIINGYNEEFAFDRTADAMISLDQAMNLLKWGA
                     ISKEDFEGDPERVLADNTIADRAIINIKEINIANKKVENVKVKVTYKLNYGLVFGDRL
                     MKQFGKYSYNTKTHKLTIE"
BASE COUNT          870 a          607 c          523 g         1091 t
ORIGIN      
        1 tctagaaact cttctgtgcc attgataata gcagcaatta cacttccggg aattaaattt
       61 ttatttctcc caattgttga agaaataagt atgtcatcag ttacaccaac acataacaag
      121 tcatcaatat tcattacgat ggcatcttgt gctatacctt tccaaacact aatatcaccg
      181 gtttctttcc agtagatgta tgcgaacgac gattttgttc cagcgccatc agcatgcata
      241 acattgcagt agttatcgtc actaccaata atatcaggta tcactttaca aaaggcattg
      301 ggaaatattc ctttgtccaa attgcgaacg gctgcatgaa catcttcttt cgatgccgac
      361 acacctctct gcatatatcg tgattgtttg gtcatcggtt aatggctaca ggtcgtttag
      421 tcactattta ctccttctta tctattactc aatagtaagt ttatgcgttt ttgtattata
      481 ggaatatttc ccaaattgtt tcattagtct gtcaccaaac acgagtccgt agtttaattt
      541 gtaagttact tttactttta cgttttcaac cttcttattg gcaatattta tttcttttat
      601 attgatgatt gccctgtctg ctattgtgtt atcagccaga actcgttcag gatcaccttc
      661 aaaatcttct ttgctaattg ctccccactt taggagattc atggcttgat ccaatgatat
      721 catagcatca gcagttctgt caaatgcaaa ctcttcatta taaccattaa taatacatga
      781 tgaaacgtaa gtgccagatt ttggagcttc ggtaaatact atcgcattat cctcaggatt
      841 gatagcaata ttaatagttg ccagatcaat atttgtagat tgtggtatat agtccttccg
      901 cagcactcta aactcagtac gtctgttaag ttggtgggca gcttctttct cattattact
      961 taataaagat tcaatataag cttcatcaag tattgtacct tcagaaaaaa gaaaaccatc
     1021 tcgaataaca tcttttttaa gtggaagcgg agccctttca ccataacctt ttgccacaag
     1081 tcttgcaggt tcaatacctc ttattatcag atagttaaca actgattgtg cacggcgttg
     1141 tgaaagtata tcgtttctct catggctatc acgtaaatct gtatgagaag ccagttctac
     1201 aacaatattt gggttatcac gtaatgtttg gatcaagtcc tgaagtgaat cctgatattg
     1261 aggttttaaa tcccattttg ctaagtcgta aagaatttca ggtagagcaa ttggttcggt
     1321 tggtataggt atgagattaa aatctttaac aaaatctttg ctaaactcaa caccaacagt
     1381 tgtaaaggtt ccttttttgt tgaaatagtt aggcttggca accagtattt cgtacattgt
     1441 gttaggttca agttggcttt tgccaaaact gtagaaaccc tcatcgttag tacgtgttgt
     1501 aactgaaagt ccactggaac caactagttg aacattaacg tcactcatat acattaatgt
     1561 gcggtcgtct ttaattgttc cgcttatagt aaactcaaga ggtggttcaa taaaatacca
     1621 gatatcctcc tgtccacgtg tacctttcct gttagagcta aagaaaccat attcatcatt
     1681 tgggtgaaat actataccaa aatcatcgaa tgttgagttc atgggatatt taaggtttcg
     1741 tggtttaccc cagtttccag cagtatcaat agtagtaaca aaaatatcaa gtcctcccat
     1801 tccaccatga ccatcagaag caaaaaataa tgttgtatcg tttcttagaa acgggaacat
     1861 ctcatcacca ggagtgttaa tgacttctcc aaggttcata ggtctgccga aaccttctga
     1921 tttagaatcc cggtatgcta cccaaatatc tttaccaccc attccacttc gtcggttggc
     1981 tgagaaatat ataacgagtt caccttcgct tactgtaggt tgaccaattg tggacatcga
     2041 atcgatacta gcaatatcaa ccatatcggg ttctccccaa gaacgacctg tccgtcttgc
     2101 tttgtatatc tggcagcccg attctttttg ttgatcgttt gggcattttg tataataaat
     2161 agtgttaaat tttgaattaa acactgctgc tccttcattg gcctcagtat ttattttctt
     2221 agtagcatca aaaagaactg gctctgacca ctctcctttt ctgtcaatct tagctacgaa
     2281 taagtcgctg aaattttgag ctgtccagtt atcagtttct ttaccggttg ctccttcacg
     2341 cgttgaggta aaaactatct cattatagtt atcagttgtg tatgcaggtg caaaatcagc
     2401 ttcacgagaa tttattttct taatattggt aatctcatat ttcgaaggat tttcaatcca
     2461 ctcttctata agggctgttg tttcagcccc tttgcgtcct cttgggtcat caggaacacg
     2521 ctcagcatag gaattatatt gctcaattgc cgcagcataa tcaccaatta tttttagcat
     2581 attagcataa tgaagtcgta tctcaggatt tcgtttgtcc caatcgtttt taataagtct
     2641 tttatatgat gcggatgctc ttttgtagtt tccggtaagc cgataacatt cggcaagttg
     2701 cgctgtaatt ctgttcttct cttctttgtt cttctttact ttagaataag cctttttata
     2761 tttatcgata gctaatgaat attgttgttt tgagaatgct tcatcggcac ttttagctgg
     2821 atttcgttga gcatgcatta atgagggtaa taaaaccaaa aaaccaagta gcaatatgcc
     2881 ggaaaataac ttgttcatat tagtatctat gtattgatag ttcattaacg tagttgtaat
     2941 agatttattg atgacgtgaa aaaataattt gttaattcgt tattcttaag tattatcttt
     3001 ttcttttttc agtacgaacc ttagattcac ctgatggttc tacatctttt tcatccatag
     3061 aagctttata ttcatctagt cttttatcac g
//
LOCUS       DASCQP010000117         4305 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000515694, whole genome shotgun sequence.
ACCESSION   DASCQP010000117 DASCQP010000000
VERSION     DASCQP010000117.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4305)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4305)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4305
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000515694"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1247
                     /locus_tag="QF480_01970"
     CDS             <1..1247
                     /locus_tag="QF480_01970"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013547887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HJN05357.1"
                     /translation="LGLNDSMLEAISFMGFEKATPVQELAVPEILLGNDLIACAQTGT
                     GKTAAFVLPILDKLTADHKHETSVLFIVPTRELAIQIDQHIQGFTYFTPVESIPVYGG
                     GGGSDWDSEKRALTSGADIIVATPGRLISHLNMGYVKFDSIKHLILDEADRMLDIGFY
                     DDIIKIIKYLPKKRQTLMFSATMPPKIRQLASKILTNPKEVSIEISKPADGVLQAAYL
                     VYDTQKTPLISSLIKNKPEITSVLIFSSTKLKVNDIVRDLRKTEKAIHGISSAFDQSK
                     REEVLMNFRAKKIRILVATDVLSRGIDIKDIDLVINYDVPNDAEDYVHRVGRTARAKA
                     TGVALTLVNEDDMYMFKRIEDFIENEVMKIPLPSELGMGPMWNPTKPLIDGKKFTNTG
                     KRKFTRKNPNHKRSNQRSKKNR"
     gene            complement(1244..2314)
                     /locus_tag="QF480_01975"
     CDS             complement(1244..2314)
                     /locus_tag="QF480_01975"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF013345.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HJN05358.1"
                     /translation="MEIKVPTLIIDQKKAGSNIDRMLKKAKNGGAIFRPHFKTHQLGD
                     IGKLFKQRNVKKITVSSVSMASYFVEHGWNNITIAFPINLREIEDINQLASKVKLNVL
                     VESLDSASIMSIKTTQTMGIFIKIDSGYHRTGLLPGDPEIDKILQLLDSNKLLIFRGF
                     LSHAGNTYTAESKSEIRSIMEDNKTCLNKLKQKYIDHYPEIIISYGDTPSCSLADDCT
                     GFDEIRPGNFVYYDVMQYHIGSCSINDIAVAVACPVVAVHASRNELVIYGGAIHLSKE
                     FIAPEKSPRFFGYIVNLTDEGWSNPIQGAYVSALSQEHGVIKMKHKDLMQYKPGAIIG
                     VLPIHSCLAANLLRTNYQLINN"
     gene            complement(2318..4120)
                     /locus_tag="QF480_01980"
     CDS             complement(2318..4120)
                     /locus_tag="QF480_01980"
                     /inference="COORDINATES: protein motif:HMM:NF024120.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl hydrolase family 28-related protein"
                     /protein_id="HJN05359.1"
                     /translation="MKKLLLITVLVFLILNLIGQVIPEDRRVDWESAIQNITYFQPDV
                     QLNVMDFGATGNGVTNDQPAIMSAIESLNNHPGYVYFPEGDYLIEEPIILKDSCILKG
                     SGSEFSTLIFDMGETSTNCISISKVQTSDFVAITGGYNKGNNLITISDISQFSVSDYI
                     EIRQENGAWDVVPISWADYSVGQITRVIAIVGNKLLLESDLRIDYSEDLNPEVRPIDP
                     ISNAGIQCMKIKRIDQPVEGAGANIYTNMAANCIISGVESDTSVGAHVSINTSLNILV
                     DGCYFHDAFTYDGVGMRGYGVALSHHTSECLITNNIFKHLRHAMMIKTGSNGNVFSYN
                     YSIEPYRTEPIPDASGDISFHGHYAFSNLFEGNIAQNIVIDHFWGPSGPFNTIFRNRA
                     ELYGIIMTTSDLLETNNQNFVGSEVTNFTFLHGLYVLTGADQFQYGNNIKGDIIPPGT
                     NTLSDSSYYLSEQPYFWNDNLDWPSVGIPNTLDVGTIPAKIRYEIGGVNTICPDSVIT
                     DVHQELSSNIPKIKVWPNPSSSFIKVKMLGNYTGKIGVSLLNTFGKVVLSANVEIDNS
                     QSFRISTQHIKPGIYLLSIYTAHQVLTKKVVISR"
BASE COUNT         1408 a          797 c          709 g         1391 t
ORIGIN      
        1 aattaggact taacgatagt atgcttgaag caatatcgtt tatgggtttc gaaaaagcta
       61 cacctgtgca ggagttggct gtacccgaaa tattattagg taatgaccta attgcttgtg
      121 cacaaactgg tacgggaaaa actgctgctt ttgttttgcc tatactagat aaactcacag
      181 ccgaccataa acacgaaaca agtgttttat ttattgtacc aacacgtgaa ctcgctattc
      241 agattgatca gcatatacaa ggattcacat atttcacacc tgttgaatca ataccggtat
      301 atggcggtgg cggtggctct gactgggata gtgaaaaacg agccctaact tcaggggccg
      361 atattattgt tgccacacct ggaagactta tttctcattt aaatatgggt tacgtgaaat
      421 tcgatagtat taaacactta atactcgatg aagcagacag aatgttggat ataggatttt
      481 atgatgatat tatcaaaata ataaaatacc ttccaaaaaa gagacaaacg ctcatgttta
      541 gtgcaactat gccccctaag atacgacaac ttgcatctaa aatattaacg aaccctaaag
      601 aagtaagtat tgaaatttca aaaccagcag atggagtatt acaagctgct tatctagttt
      661 atgatacaca aaaaacgcca cttattagta gcttgattaa aaacaaaccc gagattacca
      721 gcgtgttgat ctttagctca accaagttaa aggtaaacga tattgtcaga gatctgcgaa
      781 aaacagaaaa agctatacat ggcatctcat cagcttttga tcaaagtaag cgtgaagagg
      841 tcttaatgaa tttcagagca aaaaaaataa ggatacttgt cgcaactgat gtactaagcc
      901 gtggtataga tattaaggac attgatttag tgattaatta tgatgtgcca aatgatgcag
      961 aagactatgt tcacagggtt ggacgtactg cgcgcgccaa ggcaacaggt gttgccttaa
     1021 cacttgttaa tgaagatgat atgtacatgt ttaaacgtat tgaagacttt attgaaaacg
     1081 aagtgatgaa aattccatta ccatcggaat taggtatggg cccaatgtgg aaccccacaa
     1141 aacctcttat tgatggaaag aagtttacaa ataccggaaa aagaaaattt accagaaaaa
     1201 atcctaatca caaaagaagc aatcaaagat caaaaaagaa tcgttaatta ttaattagtt
     1261 ggtaattcgt ccgcaacaaa tttgctgcta aacatgagtg tataggtaat acgccaataa
     1321 tagctccagg tttatattgc atgagatctt tatgtttcat tttaataact ccatgttctt
     1381 gagacaatgc tgacacatat gctccttgta ttggattact ccaaccttcg tccgtaagat
     1441 taacaatata tccaaaaaac cttggacttt tttcaggtgc gataaactcc tttgataaat
     1501 gtattgctcc accgtatata actagttcgt ttctggaggc atgtacggca acaacaggac
     1561 aagcaacagc tacagctata tcattaatac tacatgagcc aatatgatat tgcattacat
     1621 cataatagac gaaatttcct ggacgaattt catcaaagcc tgtacaatca tctgctagac
     1681 tgcatgatgg agtatcgcca tatgaaataa tgatctcagg ataatgatca atatattttt
     1741 gcttcaattt gtttagacaa gttttgttat cctccattat tgatctaatt tcacttttag
     1801 attctgccgt gtatgtgttg cctgcatgac ttagaaaccc tctgaaaatt agtagcttat
     1861 ttgaatccag aagttgcaat attttatcaa tctcaggatc accaggtaac aatccggtac
     1921 gatgataccc agaatctatc tttataaata tacccattgt ttgagtagtt tttatactca
     1981 ttattgatgc agaatctaga gactccacta gtacatttaa cttcacttta cttgcaagtt
     2041 gattaatatc ctcaatctca cggaggttta ttgggaaagc aatcgtaata ttattccatc
     2101 catgttcaac gaaatatgag gccatcgaaa ctgatgaaac tgtaatcttt tttacatttc
     2161 tttgtttaaa aagttttccg atatctccta gttgatgcgt tttgaaatga ggcctgaaga
     2221 tcgcacctcc attttttgcc ttctttaaca tccgatcgat attgctacca gcctttttct
     2281 gatctattat taatgttgga acttttattt ccattggtta cctagagatt actactttct
     2341 tagtaagtac ttgatgtgcc gtatagattg acagcagata aatacccggt ttaatatgtt
     2401 gagtagagat cctaaacgat tgggaattat ctatttcaac attcgcagac agcacaactt
     2461 ttccgaaagt atttaataaa cttactccaa tttttccagt ataatttccc aacattttaa
     2521 ctttaataaa gctactagat gggttaggcc aaacttttat tttcggtatg ttactactca
     2581 attcttgatg tacatctgta ataacactat caggacatat agtatttaca ccaccaattt
     2641 cataccgtat ctttgctgga attgttccaa catccagcgt gttaggaata cccacagatg
     2701 gccaatctaa gttatcattc caaaaatatg gttgttctga taaataataa cttgaatcac
     2761 ttagcgtatt tgttcccggt ggaataatgt ctcctttaat attattacca tattgaaatt
     2821 gatctgcacc agtcagaaca tacaaaccgt gcaggaaagt aaaattcgtt acctcgcttc
     2881 caacaaaatt ctgattatta gtttcaagta aatcgcttgt agtcattatt attccatata
     2941 attcagcgcg atttctaaat atggtgttaa atggtcctga tggcccccag aaatgatcaa
     3001 ttacaatatt ttgtgctatg tttccttcaa agaggtttga aaaggcataa tggccatgaa
     3061 aagaaatatc acccgaagca tcaggtattg gttcggttcg ataaggttct attgaataat
     3121 tatatgaaaa aacattgcca ttcgaacctg tttttatcat catagcgtgc cgcaaatgct
     3181 tgaatatatt attggttatc aaacattcgc ttgtgtgatg gctaagagca accccatatc
     3241 ctcgcatacc aacaccatca tacgtaaatg catcatggaa atagcaacca tcaacgagta
     3301 tatttagact tgtatttatc gagacatgtg caccaacact tgtatcactt tctactccac
     3361 ttattataca atttgctgcc atatttgtat agatgttcgc tcctgctcct tccactggct
     3421 gatctatacg cttaattttc atgcattgaa tacctgcatt tgagataggg tctattggcc
     3481 tgacttcggg gttgagatct tcggaataat ctattcttag atcactctca agcaataatt
     3541 tatttcctac aattgctata actcttgtta tctgtcctac tgaataatca gcccatgaaa
     3601 taggcacaac atcccaagca ccattctctt gtcttatttc gatataatca ctaacactaa
     3661 actggcttat atcagaaata gttatcaaat tgttaccttt attataacct ccagttatag
     3721 ccacaaaatc agatgtttgt acttttgaaa tagatataca atttgtagaa gtttctccca
     3781 tatcaaatat caaggtcgag aattcggaac cagatccttt tagtatacaa ctgtccttta
     3841 agataattgg ttcctcaata aggtaatcac cttcaggaaa atagacataa ccgggatggt
     3901 tatttaacga ttcaattgca ctcataatag ctggttgatc attagtgaca ccatttccag
     3961 tagcaccaaa atccatgaca tttaattgaa catcaggctg gaaataggtt atgttttgaa
     4021 ttgctgattc ccaatcaaca cgcctgtctt ctggtataac ctgtccaatt aaatttagaa
     4081 tcaaaaaaac caggactgtt attaataaca attttttcat ttatgcgttg aaattagagt
     4141 ataaaggtaa cattttttaa ttttgagtta aattgtacaa ctatgaaata tggattttac
     4201 attctaatta ttcttttcgt acctaccttc tttgcctgtc aacatgataa gaacgaggtt
     4261 attactgaaa aaattcaata tgatgttaat attaaaagtc cagat
//
LOCUS       DASCQP010000118         3918 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000516846, whole genome shotgun sequence.
ACCESSION   DASCQP010000118 DASCQP010000000
VERSION     DASCQP010000118.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3918)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3918)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3918
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000516846"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..720)
                     /gene="ubiE"
                     /locus_tag="QF480_01985"
     CDS             complement(<1..720)
                     /gene="ubiE"
                     /locus_tag="QF480_01985"
                     /EC_number="2.1.1.163"
                     /EC_number="2.1.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009136439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052624 - 2-phytyl-1,4-naphthoquinone
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0042372 - phylloquinone biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HJN05360.1"
                     /translation="MNNKSDNKNSTSQPTHSADKENVRTMFNDIAPNYDFLNHFLSAG
                     IDIQWRKKVRRILAHTNPKKILDVATGTGDLAIELSKLNADQIVGIDIANEMINIGRK
                     KIVSKGLEKVIELQEGDAENLKFPDNSFDAITVAFGVRNFENLNSGLKEMCRVLRPGG
                     IVAVLEFSKPKAFPIKQLYNFYFRNILPIMGRTVSKSNAAYTYLPDSVRSFAEDDVFL
                     AELGQAGFKETKQNRLTMGIAT"
     gene            complement(756..1772)
                     /locus_tag="QF480_01990"
     CDS             complement(756..1772)
                     /locus_tag="QF480_01990"
                     /inference="COORDINATES: protein motif:HMM:NF012515.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional ADP-heptose synthase"
                     /protein_id="HJN05361.1"
                     /translation="MISSESISQLFSEFSGLTALVIGDVMVDSYIWGNVSRVSPEAPV
                     PIVEVEKRENRLGGAANVGLNLRALGATPILCSVIGTDQRGDDFTGLLKKEGLPLEGI
                     IYCDDRITTTKFRVIGNNTQLLRVDEETTSPLTKKQDQQLWQQIEMLINEKSIDVVVF
                     QDYDKGIISQKLIKQVVKLSRTKNIPVVVDPKKSNFLSYNNVTLFKPNLKEIKEGLNL
                     EVTDDNDVDIELAVAKLQDKLNAHIILNTLSDKGVFISWKIKEGYESRSIPAHIRNIA
                     DVSGAGDTVISVAGLCVAQNIDPPIMAAIANLAGGIVCEEVGVVSINKEKLHNEVSRL
                     LSRS"
     gene            2000..2887
                     /locus_tag="QF480_01995"
     CDS             2000..2887
                     /locus_tag="QF480_01995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05362.1"
                     /translation="MRSIANWRLIISLILYSCSVYGQPLSIVDGNNITKMQGDELFAE
                     WSYDGKNLLFQSVINDESRIYVYRLDDDNAVCLSKLKYNFRNPVWHPDGDKIVFDSDK
                     DGIDYLYKLDLNTLEVRPLFHRNIKSRNASFSTSSRQVYFNGYDELTNRWEIYSYDFV
                     YNNLNRLTEYRFGSCNPDIYNNGKQIVYCKINPADNKKNLEVINWYGEPKIEFDKFPA
                     YHPSWGPSGFKIFFISTMDNEISELYSIWKDGSHLERHTHDSIWVANPVISPDGTKMA
                     MSVLTDEDWDIFIFNFAEK"
     gene            2935..3771
                     /locus_tag="QF480_02000"
     CDS             2935..3771
                     /locus_tag="QF480_02000"
                     /inference="COORDINATES: protein motif:HMM:NF013324.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005743 - mitochondrial inner membrane
                     [Evidence IEA];
                     GO_component: GO:0035632 - mitochondrial prohibitin
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prohibitin family protein"
                     /protein_id="HJN05363.1"
                     /translation="MAQQQEFDLRKALPIGIVVIVIIFIIIFWSRMTTTIEAGHAGVL
                     FKTFGGGIDTTQTFGEGFHFLAPWNEMIVYETRQQEIAEDMNVLSSNGLEIKADVSAW
                     YRPEYNKLGMLHANIGTDYLRRVVIPALRSSARSVIGRYTPEQIYSTKRDAIQDEIFE
                     EAKKLLDQKYVDLTQILIRSIVLPPTIKSAIEGKLKQEQESLEYEFKLQKAQKEAQRQ
                     IIDAEGKAEANRILNASLTSNILREKGISATLKLAESNNTKVVVIGSGKDGLPLILGD
                     MK"
BASE COUNT         1243 a          670 c          691 g         1314 t
ORIGIN      
        1 tgttgctata cccatcgtca gtctattttg cttcgtttct ttaaatcctg cttgtccaag
       61 ttcggctaag aaaacatcgt cttcagcaaa acttctaacc gaatccggta gatatgtata
      121 tgctgcatta ctttttgaaa ctgttcttcc cattattggc aatatgttcc taaaataaaa
      181 attatataat tgtttgatag ggaatgcttt aggtttagag aattccagaa cagctacaat
      241 tccgccaggc cgaagaaccc tacacatttc ttttaaacca gagtttaggt tttcaaaatt
      301 tctaacacca aatgcaacag taattgcatc aaaactatta tcagggaatt ttaggttttc
      361 ggcatcacct tcctgaagtt caataacttt ttctaatccc ttggaaacta tcttttttct
      421 tccgatatta atcatttcat ttgcaatatc aatgcctaca atctgatcag cattcagctt
      481 tgaaagttca attgccaaat caccagtacc tgttgcaaca tccaatattt tttttgggtt
      541 agtatgagct aatatccttc taaccttctt tctccattgt atgtcgatac ctgctgacaa
      601 aaaatgattt aaaaagtcat agttaggggc tatgtcgttg aacatagttc taacattctc
      661 tttatcagcc gaatgggttg gttgtgaagt gctgttctta ttatccgact tgttattcat
      721 ttttaatcta gtagcctagg atttgttgaa gaatattagg atcttgagag taatctgctt
      781 acttcattgt gaagtttctc tttattaata gaaacaacac caacttcttc acaaactatt
      841 ccacccgcaa ggtttgcaat tgccgccatt attggaggat caatattttg tgcaacacat
      901 agtccagcaa cactaattac tgtatcacca gctccactta catctgctat atttcgtata
      961 tgagccggta tcgacctaga ctcgtaacct tcttttattt tccaactaat aaatacacct
     1021 ttgtcagata gagtattcaa aataatatgg gcgtttaatt tgtcctgtaa cttagcaacc
     1081 gcaagctcaa tatctacatc attgtcatct gtgacctcta aattaaggcc ttcttttatt
     1141 tcttttaagt tgggtttaaa caatgttaca ttattgtaac tcagaaaatt tgatttctta
     1201 gggtctacaa caacaggtat gtttttagtt cttgataatt ttacaacctg cttaataagc
     1261 ttttgtgaga taattccttt atcgtaatcc tggaatacca caacgtcaat acttttttca
     1321 ttaatcagca tctctatttg ttgccacagt tgctggtctt gttttttagt tagtggtgaa
     1381 gtagtttctt catcaactcg caacaactgc gtattatttc cgatcactct gaatttagtg
     1441 gtcgtaattc tatcatcgca atatattatg ccttccaatg gtagtccctc ctttttaagc
     1501 aatccggtaa aatcatcacc tctttggtcg gttccaataa ctgagcacaa tattggtgtc
     1561 gcgcctaaag ctcttaaatt taaacctaca ttagcggctc cacctaacct gttttcgcgt
     1621 ttttcaactt ccactattgg aacaggagct tccggagaaa cacgacttac atttccccat
     1681 atatacgagt caaccattac atcaccaata acaagtgcag ttagaccact aaattctgaa
     1741 aaaagttgcg aaatagattc tgaagatatc atatctgaaa aaaatttaga tatgcaaaaa
     1801 taacgatttg ttaaatacag gggttatcag aaatattggt atgaggattt aagatactta
     1861 ggaattgtag agaggcatgt acatcgtaaa caataaacaa tacaattact ctgaacatat
     1921 cctaataatc caatcatcct ctttacatca atttcatatt tttgacaaga ttttttcata
     1981 ctttaaacct gagaatagaa tgcggtcaat cgctaattgg cgacttataa ttagcttaat
     2041 actctatagt tgtagtgttt acggacaacc tcttagtatt gttgatggta ataacatcac
     2101 aaagatgcaa ggtgatgaat tatttgctga atggtcttac gatggtaaga acctcttatt
     2161 tcaatcggtg attaatgatg aaagcagaat atatgtttat cggttagatg atgataatgc
     2221 agtatgttta agtaaactga aatataattt cagaaatcct gtttggcatc ccgatggtga
     2281 caaaatagta tttgattctg acaaggatgg tattgattat ctttacaaat tagatttgaa
     2341 tactctggaa gtcaggccat tgtttcatcg caatattaag agccgcaacg cttctttttc
     2401 aacttcatca cgtcaagttt attttaacgg ttatgatgag ttaacaaatc gctgggagat
     2461 ttatagttat gactttgttt acaataacct aaacaggtta acagaatata gatttggtag
     2521 ttgtaatccg gatatatata acaatggcaa gcagatcgta tattgtaaga ttaatccagc
     2581 tgataataaa aagaatcttg aagtaattaa ttggtatggc gaacctaaaa ttgagtttga
     2641 taagtttcct gcttatcatc catcatgggg gccatcagga tttaagattt tcttcatctc
     2701 aacaatggat aatgaaataa gtgaacttta ttctatatgg aaagatggca gtcatctgga
     2761 gagacatacg cacgattcaa tttgggtggc aaatccggtt atatcacctg atggaactaa
     2821 aatggcaatg tctgttttaa cagatgagga ttgggatatt tttatattta attttgcgga
     2881 gaagtaatga cgattattat taattttgct attcattaat taaaaatctt aactatggca
     2941 cagcaacagg aatttgattt aagaaaagca ttaccaatag gtatagtggt aattgtaata
     3001 atatttataa taatattttg gagtaggatg actacaacca ttgaagcagg tcatgccggt
     3061 gttcttttta aaactttcgg tggaggtata gatacaacac aaacatttgg tgaaggattt
     3121 cattttttag ctccatggaa tgaaatgata gtctatgaaa ctcgccagca ggaaattgca
     3181 gaagacatga acgtcctttc ttcaaatggg ttagagatta aagcagatgt atcagcttgg
     3241 tacagacctg aatacaataa acttggaatg ctgcatgcaa atattggaac ggattatttg
     3301 cggagagttg tgattccagc gctgcgatca tctgcccgaa gtgtgattgg tagatatact
     3361 cctgaacaaa tttactcaac aaagagagat gctattcagg atgagatatt tgaagaagct
     3421 aagaaacttc ttgatcaaaa atatgtggac ctaactcaaa tattgataag gtcaattgta
     3481 ttgcctccaa caattaagtc ggctattgaa ggaaaactaa agcaagaaca agaatcgctc
     3541 gagtatgagt ttaaattaca gaaagctcaa aaagaggccc agcgtcaaat tattgatgct
     3601 gaaggtaagg ccgaagctaa caggattctt aatgccagtc ttacaagtaa tatattgcgc
     3661 gaaaaaggaa ttagtgcaac tcttaagcta gctgaatcta ataatacaaa agttgttgtt
     3721 attggcagcg gtaaagatgg tttgccattg atactgggtg atatgaagta gatgtgaatc
     3781 tagggttttt cgtcaatttg catgttgtca attatttcaa tattacgcag tgacttttta
     3841 tccagaaagc aatatattgt aagcccagag attaaatttg cagtgaagtt ttctatgctt
     3901 cagtgcctga tgtgttcg
//
LOCUS       DASCQP010000119         2150 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000518140, whole genome shotgun sequence.
ACCESSION   DASCQP010000119 DASCQP010000000
VERSION     DASCQP010000119.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2150)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2150)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2150
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000518140"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            118..>2150
                     /locus_tag="QF480_02005"
     CDS             118..>2150
                     /locus_tag="QF480_02005"
                     /inference="COORDINATES: protein motif:HMM:NF039587.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HJN05364.1"
                     /translation="MLSLVKSSSWLKVVFLIVLVINASGLISQDRIYTTSRITTDPPV
                     IDGIIDEKVWDIVSWSGDFTQYEPYEYASPSQLTKFKVVYDNNNLYVAIRAFDSIPGQ
                     IERRLGRRDSFEGDWVGIGIDSYNDKLTGFAFSVNAAGVKGDGIFTNDSDFDDTWDPV
                     WYVKVSIDDLGWVAEMKIPYNQLRFAKETNHIWGFDVLRQIFIKEELDLWKMIPVDAG
                     GWVSNWGELRGINNIVPKKEVEILPYGMIKFETEEKEEGNPFITGDKFGFNAGIDGKI
                     AITNDFTLNFTANPDFGQVEADPSEVNLSAFETFFEEKRPFFVEGSNIYNYPLTSGDG
                     PFSRDNLFYSRRIGRQPHYEPELIDGEFMSAPEFTTILGAVKLSGKTKNGWSVGVLES
                     VTREEKATIDYEGNRRDVVIEPTTNFFNTRVQKDLNNSNTQIGGMVTATNRFINDTSV
                     NFLPNSAYTSGFDFANFWDDKSYYVSARATFSLVEGSTEAITELQESSQHYFQRSDAS
                     HLKVDTTLTSLSGSGGSIEGGKVGGGHWRMGGWTTWRSPGLELNDMGYLRIADFVNQI
                     LWGGYRIWEPFGIFRSLNINAATWSGWDFSGKHLYMGGNLNLNTKFKNYWEFGTGVNR
                     EGFDINRHELRGGPALRAPGSWSNWWHVGIDDRKKAELTVWVTNSRGDNKNKRS"
BASE COUNT          707 a          293 c          506 g          644 t
ORIGIN      
        1 gttagaataa aaatcaataa attattaaaa tattgttact caaacattaa gtgcttttgg
       61 catgataaat gatcttagaa cgcttaattt gatatagtta gagaattaag agtttagatg
      121 ttaagtttag taaagagtag tagttggtta aaagttgtat tccttattgt gttagtaata
      181 aacgcatctg gattaatttc tcaagatagg atatacacta cgagtagaat aactactgat
      241 cctccagtaa tagatggaat aatagatgaa aaagtatggg acattgtgtc ttggtcaggc
      301 gattttaccc aatacgaacc gtacgagtat gcatccccat cacagctaac aaagtttaag
      361 gtggtctatg ataataacaa cctctatgtt gcgattcgag ctttcgatag catccccggt
      421 caaattgagc ggaggttagg aaggcgagat agttttgaag gagattgggt aggtatagga
      481 atagatagtt ataatgataa actaaccggc tttgcttttt cggttaatgc tgctggagta
      541 aaaggcgatg gaatatttac taatgattct gactttgacg atacttggga tcctgtttgg
      601 tatgtcaaag ttagtattga tgatcttgga tgggttgctg aaatgaagat tccctataat
      661 caattaaggt ttgcaaaaga aacaaaccat atttggggat ttgacgtact ccgtcagata
      721 tttataaagg aagaacttga tttatggaaa atgatacctg tagatgctgg tggatgggta
      781 agtaattggg gcgaattacg aggtataaat aacatagttc caaaaaagga agttgagata
      841 cttccatatg ggatgattaa atttgagact gaagaaaagg aggagggaaa tccatttatt
      901 actggtgaca aatttggatt taatgcaggt attgatggaa aaattgcaat cacaaatgac
      961 ttcacattaa actttacggc caaccctgat tttggtcagg tggaagcaga cccttcggag
     1021 gtaaatcttt ctgcttttga gacattcttt gaagaaaaga gaccattttt tgtagaaggt
     1081 agtaatattt ataactatcc tcttaccagt ggtgatggtc cctttagtcg ggataattta
     1141 ttttattcaa gacgaattgg aagacaacct cattatgaac ctgaactcat tgatggtgag
     1201 tttatgagtg ctcctgaatt taccacaata ttaggagctg ttaaattgtc tggtaaaaca
     1261 aaaaatggat ggtcggttgg cgtattggag agtgttacaa gagaagaaaa agcaacgata
     1321 gattatgaag gaaatcgtag agatgtagta attgagccaa ctacaaactt ctttaataca
     1381 agggtacaaa aagatcttaa taatagcaat actcagatag gaggaatggt tactgcaacc
     1441 aacaggttta ttaatgatac ctcagtaaat ttcttaccaa actcagctta tacgtccggt
     1501 ttcgattttg caaatttttg ggatgataaa tcatattatg tgagcgcacg agctaccttt
     1561 agtttggttg aggggagtac tgaagcaatt acagaattgc aagaatcttc acagcattat
     1621 tttcagagat cggacgcatc gcatttaaaa gtagatacaa cgttaaccag tttatccggt
     1681 agcggaggtt caattgaagg cggaaaagtg ggcggtggcc attggaggat gggtggatgg
     1741 actacatgga ggtctcctgg gttagaactt aatgatatgg gatatctacg tattgcggac
     1801 tttgtaaacc agattctttg gggaggttac aggatttggg aaccgttcgg tatattccga
     1861 agtttaaata ttaatgcagc tacttggtcc ggatgggact tttcaggtaa gcatctttat
     1921 atgggaggaa atttaaattt gaatactaaa ttcaaaaatt attgggaatt tggcacagga
     1981 gttaacagag aagggtttga tataaatcga cacgaactca gaggagggcc agccttgaga
     2041 gcaccaggct cttggagtaa ttggtggcat gttggtatag atgatagaaa aaaagctgaa
     2101 cttactgtgt gggttaccaa tagcaggggc gataataaga ataagagatc
//
LOCUS       DASCQP010000120         3200 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000519437, whole genome shotgun sequence.
ACCESSION   DASCQP010000120 DASCQP010000000
VERSION     DASCQP010000120.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3200)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3200)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3200
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000519437"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            85..216
                     /locus_tag="QF480_02010"
     CDS             85..216
                     /locus_tag="QF480_02010"
                     /inference="COORDINATES: protein motif:HMM:NF013440.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GreA/GreB family elongation factor"
                     /protein_id="HJN05365.1"
                     /translation="MKQGKISVESPIAKGLLGKEVGNTAEISVPAGKLNFEIIEIIR"
     gene            227..628
                     /locus_tag="QF480_02015"
     CDS             227..628
                     /locus_tag="QF480_02015"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005928862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HJN05366.1"
                     /translation="MASIFTKIVSGEIPSYCIAETDKYYAFLDINPLAEGHTLVIPKL
                     ETDYILDIEDAELGGLFTFAKKVGKAIEQVVECKRIGITVIGLEVPHAHVHLIPINSL
                     YDMDFKQPKLSFKHDEFSELASKIQSAFNTL"
     gene            complement(676..2577)
                     /locus_tag="QF480_02020"
     CDS             complement(676..2577)
                     /locus_tag="QF480_02020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009134040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HJN05367.1"
                     /translation="MSDLINHECGIALIRLRKPLEYYISKYGTSVYGLQKLHLLMQKQ
                     HNRGQDGAGIAEVKLDLEPGKKYISRLRSNSTTPIKDIFNDAYDAIQNVAKGDKQRLD
                     DVNWLKLNAEFTGELFLGHLRYGTFGENNISTLHPFVRSNNWKTRNLVLAGNFNMTNT
                     AELFDELVKLGQYPVETSDTITVLEKIGHFLDEENQKLYKQFKKSGFKKKEITNQIID
                     SIDILNILNESAKRWDGGYVIGGLVGHGDAFIMRDPNGIRPAFYYIDDEVIVAASERP
                     VIQTAFNLSEEEVKELKPGHALIIKKDASVKISRFVDKKPVKSCSFERIYFSRGTDKD
                     IYQERKSLGKLLTPAILEEIDYDLKNTVFSFIPNTASVAFQGMMDQIHEFSTDRIKEK
                     ILNSKDPLSRDRLDVIFSNTPRVESIAVKDAKLRTFITQDTQRDDLVGHVYDITYGIV
                     KKDVDSLVVLDDSIVRGTTLKNSIIQILDRLHPKRIIIASSAPQIRYPDCYGIDMAKL
                     SDFVAFNATIALIKETKQDHIINDVYNKSKAQQNLPKEDIVNFVKEIYKPFTAQQISD
                     KVAEIVKVKGVKADLKVIYQSIEDLHKAIPNHTGDWYFTGNYPTPGGNKVVNQSFINY
                     IEGVNIRAY"
     gene            2624..3076
                     /locus_tag="QF480_02025"
     CDS             2624..3076
                     /locus_tag="QF480_02025"
                     /inference="COORDINATES: protein motif:HMM:NF012792.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HJN05368.1"
                     /translation="MIHTRLSNEHDAPVIAEFQIEMAKETEDLDLERTTVADGVFSVF
                     RDPQKGKYYVATEKDEIVASMLITQEWSDWRNSWVYWLQSVYVIPEKRGLGIFKQMYE
                     YIRKQVVESNEVAGIRLYVDMKNSGARKVYTKLGMNGDHYQVFEWMKE"
BASE COUNT         1048 a          541 c          541 g         1070 t
ORIGIN      
        1 tatttattat caaccgtgac tatcagaaat attaaatata attctacgat gagatacaca
       61 ctggtacttt aggaagcaac agacattaaa caaggtaaga tatcagtgga atctcctatt
      121 gcaaagggtt tgctaggaaa ggaagttggc aatacagctg aaattagtgt tcctgctggc
      181 aaactaaatt tcgaaattat tgaaattata agataaatat tactcgatgg cctcaatttt
      241 tactaaaatt gtcagcggag aaataccctc ttattgtata gcagaaactg acaagtatta
      301 tgctttttta gatattaatc ccttagcaga aggtcatact cttgttatac caaaactaga
      361 aactgactac atcttagaca ttgaagatgc tgaattaggg ggacttttta cttttgcaaa
      421 aaaagtgggc aaagctattg aacaagtagt tgagtgtaaa aggattggga ttactgttat
      481 cggattagaa gttcctcatg ctcatgttca tcttattcct attaactctc tttatgacat
      541 ggatttcaaa caacctaaac ttagtttcaa acatgacgag tttagtgaat tagcaagcaa
      601 aatacaatct gcctttaaca cactgtaata ttatatagag atcgaggaat aaaattaaag
      661 ggtaataaat aattattaat aagccctaat attcacacct tcaatataat taatgaaaga
      721 ctggttaact actttgttac caccaggtgt tggataattg cctgtaaagt accaatctcc
      781 cgtatgatta ggtattgcct tatgcaggtc ttcaatactt tgatatatta ctttaagatc
      841 agctttaacg ccttttactt taacaatctc ggcaacttta tctgagattt gctgggctgt
      901 aaaaggttta tatatttctt ttacaaaatt cactatgtct tctttaggca aattttgttg
      961 agctttcgat ttattgtaaa catcgtttat tatatgatcc tgttttgtct ctttgataag
     1021 agcaatggta gcattaaaag caacaaagtc gctaagcttg gccatatcaa ttccgtaaca
     1081 atcaggatat ctgatttgag gagcagaaga agcaataatt atcctcttgg gatgaagcct
     1141 gtctaatatt tgaataatac tatttttcaa tgttgtgcct ctgacaattg agtcatccag
     1201 aacaacaaga gaatcaacat cttttttcac aataccataa gtaatgtcat acacatggcc
     1261 aaccagatca tcacgttgag tatcctgtgt tataaaagta cgaagttttg catccttaac
     1321 agctattgat tcaactcgcg gagtattgct gaaaataaca tcaagtctat cacgcgacag
     1381 gggatcttta ctattaagaa ttttctcttt tatcctatct gtagaaaact catgaatctg
     1441 atccatcata ccctgaaaag cgactgaggc tgtatttgga ataaatgaga ataccgtatt
     1501 cttaagatcg taatcaattt cttcaaggat tgctggagtt aacagctttc ctaagctttt
     1561 gcgttcctga taaatatcct tatcagtacc tctggaaaaa taaattcttt caaacgaaca
     1621 tgacttaaca ggttttttat cgacaaatct gcttatttta acactggcat ctttttttat
     1681 tattaacgca tgaccaggtt taagttcctt tacttcttct tcactcagat taaatgctgt
     1741 ttgaataaca ggtcgttctg aagctgcaac aataacttca tcgtcaatat agtaaaatgc
     1801 aggtcgtatt ccatttggat cacgcattat aaaagcatct ccatggccta ctaagcctcc
     1861 aatcacataa cccccatccc atctttttgc agattcgttt aatatattta gaatatcaat
     1921 agaatcaata atttggtttg taatctcctt tttcttaaaa ccactttttt taaactgctt
     1981 gtataacttt tgattttcct catctaggaa atgtccaatt ttttccagta cggtaatagt
     2041 atcagatgtt tcaacaggat attgccccaa tttaacaagc tcatcaaata actcagcagt
     2101 atttgtcata ttaaaattac ctgccaatac aaggtttctc gttttccagt tatttgatct
     2161 cacaaatgga tgaagggttg agatattgtt ttcgccaaat gtaccatatc gcaaatggcc
     2221 taaaaataat tctccagtaa attcagcatt taattttaac caatttacat catcaagtcg
     2281 ttgtttatct ccttttgcta cattttgaat agcatcgtaa gcatcattaa atatgtcttt
     2341 aataggagtt gtagaattcg atcttaagcg actaatatat tttttacctg gttcgaggtc
     2401 gagttttact tcagctattc cagcaccgtc ctgccctctg ttgtgttgtt tttgcattag
     2461 gagatggagt ttctgtaacc cgtaaacaga agttccatac ttagatatat aatattcaag
     2521 aggctttcgt aatcttatta aggcaatgcc acattcgtga tttataaggt cgctcatttg
     2581 ttaaacagaa tatttatatt tttgtggcaa aagtaagaaa aagatgattc atacacggtt
     2641 atccaatgaa catgatgctc ctgtaattgc agaattccaa atcgaaatgg cgaaagaaac
     2701 tgaggatctg gatcttgaaa gaactactgt agctgatggc gttttctcag tttttagaga
     2761 tcctcagaag gggaaatatt atgttgctac tgaaaaggat gaaatcgttg catctatgct
     2821 tataactcag gaatggagtg actggaggaa tagctgggta tattggttac aatcagtata
     2881 tgttattcca gaaaaaagag gacttggcat tttcaagcaa atgtatgagt acatacgtaa
     2941 acaggttgtt gaaagtaatg aagttgcagg tataaggctt tacgtagata tgaaaaactc
     3001 aggtgcacgt aaagtgtata ccaaacttgg catgaatggc gatcattatc aagtttttga
     3061 atggatgaaa gaataattat aaatacatac ttaaatgaaa aatattgtaa aatcaatgat
     3121 agttgtgata atcggtttat tactatcaac tacagtaata tcacaaacag ctgacaaaag
     3181 cgactggaaa ggcggttatc
//
LOCUS       DASCQP010000121         3797 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000520070, whole genome shotgun sequence.
ACCESSION   DASCQP010000121 DASCQP010000000
VERSION     DASCQP010000121.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3797)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3797)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3797
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000520070"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..526
                     /locus_tag="QF480_02030"
     CDS             <1..526
                     /locus_tag="QF480_02030"
                     /inference="COORDINATES: protein motif:HMM:TIGR02087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aconitate hydratase"
                     /protein_id="HJN05369.1"
                     /translation="SIDDSDDRRTNGSWNYKDVDNLNTDQMFAGNLTYSVLSSEAEKI
                     MPHLFKGFDVNFTDNVKTGDIIIAGSNFGCGSSREHPAVGLAHAGVKAVICGSVNRIF
                     YRSSVNQGLPIIILPEAVEAYSPGDSVDINFKEGLVSIGNRAFSFAPPPDKIISVFEA
                     NGLVNYIKNIPEKD"
     gene            662..1939
                     /locus_tag="QF480_02035"
     CDS             662..1939
                     /locus_tag="QF480_02035"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN05370.1"
                     /translation="MKNKILCTLIFILSISVSNSFAQNKDYNTFEYLEMGAGYANDIF
                     YSVADGEVLNIPRAGWDIAFYTSASRTGIIINEGSGADLYTYPHGDIDDWDDVDTSGM
                     SAWDWSYNSPLDWENGAFNRNSTGYPDCGWGVYDEDIYSFEGDSIYVIRTSTGAYKKI
                     WIVDKNTEDNIYNIKYADLDGWDEQTVEIDVNPYTTKNFVYYSLITNTLFDREPSAEW
                     DILFTKYIDITYDVYGDPYEYLVTGATSNVNREANKFHPVTDDYVDYAALPFETLKNV
                     IGFNWKNFDFGSMSWECEDSTVFFVRKPDWHVYRIRFTYWQGSASGYFEFYNDAINIT
                     DIENKFDKHHTMSVYPNPATEYVDVRINNEKLIVGNIVISDLSGRNVYSSSISNLSGN
                     KTVSIRTNDFETGLYFITLISDDFKEIQKLVIR"
     gene            2419..3795
                     /locus_tag="QF480_02040"
     CDS             2419..3795
                     /locus_tag="QF480_02040"
                     /inference="COORDINATES: protein motif:HMM:NF012376.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HJN05371.1"
                     /translation="MKFKLNYILIPLLLVVGYFLLLYSMPKYTGQYLFMVILILADFY
                     LWSSVKKQVFNYKNWLRVLTITIYWLPLLLLVILLVGSVIIPVIHWNDSIRTYMVGVI
                     LVFYTAKILPITFLILADVVRVIQKIFIIVKKDNRQQIIEKNAALATSVTDEGVQEGI
                     SRNKFLQYIGFISGGLVLGTMFTGMLKWVYEFKIIQEKIVFPHLPRNFNGFKIVQISD
                     LHLGSWTSKKPLQRAVNMINDLQPDLILFTGDLVNYATNEAIKFEDILSQLKAKDGVF
                     AILGNHDYGNYVTWPSAEAKRENMKQLINFFDKIGWKLLNNENEILSKESGKLAIIGV
                     ENWGANMRFPKYGDIDKAIQGSEQADIKILMTHDPSHWEKVVIPGNYDIDLALSGHTH
                     GFQFGIETKDLKWSPAKYMYKHWAGLYQDRKKSGKYIYVNRGLGSIGYPGRIGILPEI
                     TVIELMSS"
BASE COUNT         1268 a          550 c          729 g         1250 t
ORIGIN      
        1 cagtattgat gattcggatg ataggagaac caacggtagc tggaattata aggatgtcga
       61 taatctcaat actgatcaaa tgtttgctgg taacctcact tatagtgtgt taagttccga
      121 agccgaaaaa attatgccac acttgtttaa aggtttcgat gttaatttta cagataatgt
      181 taagacaggc gatataataa ttgccggatc aaattttggg tgcggcagct cacgtgagca
      241 ccctgcagtt ggattggctc atgcaggtgt taaggctgtt atttgtggtt cggttaatcg
      301 tattttttat cgttcttctg ttaatcaagg attaccaatt ataatacttc cggaagctgt
      361 agaagcttat agtccaggtg attctgttga tatcaatttt aaagaaggac ttgtttctat
      421 tggtaacaga gcatttagct ttgctccacc tcctgacaaa ataatatcag tctttgaagc
      481 aaatggactt gtgaattata taaaaaatat tcctgaaaaa gattgattat taggttatcg
      541 gcaataaaca aacatgtaaa ttgttcgaac tttacgaccg atagttggta gtactacata
      601 attatgttaa atttggagtc ttagatagaa atttcaaatt aataactaaa aaatcgcaac
      661 aatgaaaaat aaaattttat gcacacttat ctttatttta tctattagtg tatctaatag
      721 ttttgctcag aataaagatt ataatacttt cgaatactta gaaatgggag ctggttatgc
      781 gaatgatatc ttctatagtg tagccgacgg agaagtttta aacatcccca gagcgggatg
      841 ggatatagca ttttatactt ctgcttctcg tacaggaata ataataaatg agggcagtgg
      901 cgctgacctt tatacttacc cacatggtga tatagatgac tgggacgatg ttgatacatc
      961 agggatgtca gcgtgggatt ggtcatataa tagtcctcta gattgggaaa atggagcttt
     1021 taatcgaaac tcaacaggat atcccgattg tggatgggga gtatatgatg aggatatata
     1081 ttcttttgaa ggtgattcga tttatgtaat aagaacctct acaggtgctt ataaaaaaat
     1141 atggatagtt gataaaaaca ctgaagataa tatttacaat ataaaatacg ctgatcttga
     1201 tggatgggat gaacaaaccg ttgaaattga tgttaatcca tatacaacta agaactttgt
     1261 gtattattct ttaattacaa atacgctttt cgatagggaa ccaagtgctg aatgggatat
     1321 tctttttact aaatacatcg acatcactta tgatgtatat ggtgatcctt atgaatatct
     1381 tgttactgga gctaccagca atgtgaaccg cgaagccaat aaatttcatc ctgtaaccga
     1441 tgattatgtg gactatgctg cactaccttt tgagactcta aaaaatgtta tcggatttaa
     1501 ttggaaaaat ttcgattttg gctctatgtc atgggaatgt gaggattcaa cagtgttttt
     1561 tgttcgaaaa ccagattggc atgtttatag aataagattt acatactggc agggttcagc
     1621 ctctggttat tttgaatttt acaatgacgc tattaatata actgatatag aaaataagtt
     1681 cgataagcat catactatgt ctgtttatcc aaatccagca actgaatatg tggatgtaag
     1741 aatcaataat gaaaaactca ttgttggtaa tattgtaatc agtgatctat caggcagaaa
     1801 tgtttatagc tcctcgatca gtaatttatc cggaaataaa actgttagca taaggacaaa
     1861 tgactttgaa acaggactct attttatcac tctgatcagt gatgatttta aggaaatcca
     1921 aaaacttgtt attcgatagc attacaactc tctcaataac aatttacccg ggtttcttgt
     1981 tgatattgca ttttattgcg attagcaaga gaccctgata tacttgagtt ccaaagactt
     2041 taatcataca aagaattaag ataaagaggt gaagataggt ttatctgaac tcatactttt
     2101 gtcataattc ctcgataaca attattaatt agaatttatt ttgtaaacaa gaatttagca
     2161 ccagaatttg aattgatgta aatatttgtt aaccgaaatg gtttaattaa aaaaaacaat
     2221 tacttttgcc gcgttttctg agaagctact aatattttac tttaaggaag cttgctaatt
     2281 tcgaaaaaaa aagttagcta tttgaggtat cttaaagtta atagttgtta aactttctca
     2341 catgagaatt taataataat aatacaatta caatttcgtt tgtacacaga actaaaaatc
     2401 acaaagcatt gctaattgat gaagtttaaa ttaaactaca ttctaatacc acttcttctt
     2461 gttgttggtt attttctctt gttgtacagt atgccaaaat atactggtca gtatttattt
     2521 atggttatac taattcttgc cgatttttat ttatggtcat cggtaaaaaa acaagttttc
     2581 aattataaga attggctccg tgtccttaca ataactattt attggcttcc acttttatta
     2641 cttgtgatct tgcttgttgg gtctgttata atacccgtta ttcattggaa tgatagtatc
     2701 agaacgtata tggttggtgt aattttagtt ttttataccg ctaagatcct gccaataaca
     2761 tttttaattt tggctgatgt tgtacgtgta atacaaaaga ttttcatcat agtgaagaaa
     2821 gataacagac agcaaattat cgaaaagaat gccgctctgg caacatccgt tacagatgag
     2881 ggggttcagg aaggaatatc acgtaataaa tttctacaat atattggatt tatctcagga
     2941 ggacttgttt taggaacaat gtttacagga atgttgaagt gggtatatga gtttaaaatt
     3001 attcaggaga agattgtatt tccacatctg ccaagaaatt ttaatggatt caaaattgtt
     3061 cagatatcag acctgcatct gggaagttgg acatcaaaga aacctttgca gagagctgta
     3121 aacatgataa atgatttaca acctgacctt attttgttta ccggcgacct tgtaaattat
     3181 gcaacaaacg aagcaatcaa gtttgaggat atcctttcgc aacttaaagc aaaagatggt
     3241 gtatttgcga ttctgggtaa tcacgattat ggaaattacg ttacatggcc atctgcggag
     3301 gctaaacgtg aaaatatgaa acagttgatt aactttttcg ataaaattgg ttggaagctg
     3361 ctgaataacg aaaatgagat acttagtaaa gagagtggta aacttgccat tattggtgtt
     3421 gaaaactggg gggcaaacat gcggtttcca aaatatggcg atatcgataa agcaattcaa
     3481 ggaagtgaac aagcagatat taagatacta atgacacacg acccgtctca ttgggagaag
     3541 gttgtgatac caggtaatta tgatatagac ctggctctat ccggccatac acatggattt
     3601 cagtttggta ttgaaacgaa agatttaaaa tggagcccag caaaatacat gtacaaacat
     3661 tgggcagggt tatatcagga tcgtaaaaaa tcaggaaagt acatttatgt gaaccgggga
     3721 ttaggttcaa ttgggtatcc aggaagaatt ggtatactac cggaaattac ggttatagaa
     3781 ttaatgtcgt cctaatt
//
LOCUS       DASCQP010000122         1647 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000521161, whole genome shotgun sequence.
ACCESSION   DASCQP010000122 DASCQP010000000
VERSION     DASCQP010000122.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1647)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1647)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1647
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000521161"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..765
                     /gene="mtnA"
                     /locus_tag="QF480_02045"
     CDS             <1..765
                     /gene="mtnA"
                     /locus_tag="QF480_02045"
                     /EC_number="5.3.1.23"
                     /inference="COORDINATES: protein motif:HMM:TIGR00524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046523 -
                     S-methyl-5-thioribose-1-phosphate isomerase activity
                     [Evidence IEA];
                     GO_process: GO:0019509 - L-methionine salvage from
                     methylthioadenosine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-methyl-5-thioribose-1-phosphate isomerase"
                     /protein_id="HJN05372.1"
                     /translation="ARNLFYAVDRVYRAGLISAENAMVEAQKVAQQDAADSKRIGELG
                     SELIKKKANILTHCNAGWLAFVDYGTALAPIYLAKKQGKEVFVYVDETRPRNQGGKLT
                     AWELFNNDVPHIIIPDNAAATLMAQGKIDMVIVGADRIAANGDVANKIGTLDRAIIAN
                     EFNIPFYVAAPTSTIDGDCATGKEIPIEERRQDEVLFQTGIDANNNSIQVMVCSPGSK
                     ALNLAFDVTPAKYITGIITEKGIVKAHHQSIKKLLE"
     gene            777..1205
                     /locus_tag="QF480_02050"
     CDS             777..1205
                     /locus_tag="QF480_02050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013065575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HJN05373.1"
                     /translation="MTQYTYKYPRPALTVDMMVTRNVSSGIEILLIQRLNPPFQNQWA
                     LPGGFVDMEETLEHAASRELAEETGLTDIVLSQFKAFSTLGRDPRGHTISVIFTGLAS
                     KDSIVRAGDDAKNVSWFSVDKLPSLAFDHAEIIQEVLAST"
     gene            1308..>1647
                     /locus_tag="QF480_02055"
     CDS             1308..>1647
                     /locus_tag="QF480_02055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005939806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HJN05374.1"
                     /translation="MDYKDYYSILGVAKSATKDEIKKSYRKLAKKYHPDKTKGDKALE
                     EKFKEVSEAYEVLSHDENRKKYDELGANWKNQQQAGGPGGFDYSQYYANTGGQGSHQT
                     FEGDPEMFSEF"
BASE COUNT          563 a          267 c          359 g          458 t
ORIGIN      
        1 gctagaaacc ttttttacgc agttgatagg gtttaccgtg caggtttgat atcggctgaa
       61 aatgccatgg ttgaggctca aaaggttgct caacaagatg ctgcagattc aaagagaata
      121 ggtgagttgg gaagcgaact tataaaaaag aaggcaaata ttctaacaca ttgcaatgca
      181 ggttggcttg cttttgttga ttatggaaca gcattagccc caatttatct tgcgaaaaag
      241 caaggaaaag aagtgtttgt ttatgttgat gagacccgtc cacgtaatca gggaggaaaa
      301 ctaacggctt gggaattatt taataatgat gtacctcata taataatacc tgataatgct
      361 gcagccacac ttatggcaca aggaaaaatt gatatggtaa ttgttggtgc tgacaggatt
      421 gctgcaaatg gtgatgttgc taacaaaata ggaactcttg atagagcaat aattgccaat
      481 gagttcaata ttccgtttta tgtggccgct ccaacatcta cgattgatgg tgattgtgcg
      541 acaggtaaag aaatcccgat cgaagaacgc agacaagatg aagtattatt tcaaactggt
      601 attgatgcca acaataactc tatacaggtt atggtgtgtt ctcccggatc aaaagcacta
      661 aacctggcgt ttgatgtaac acctgctaag tatatcacag gcataattac agaaaaaggt
      721 attgtaaaag cacatcatca atcaattaaa aagctattgg agtaatagtt tcgaaaatga
      781 cacaatatac ttacaaatat ccccgacctg cattaactgt cgatatgatg gtaaccagaa
      841 atgttagctc aggaatagag atattattaa ttcagaggtt aaatccaccg tttcaaaatc
      901 aatgggcttt gcccggaggt tttgtcgata tggaggaaac tttagaacat gctgcatctc
      961 gtgaattagc tgaagaaaca gggcttacag atattgttct tagccaattc aaggcgttta
     1021 gtacacttgg ccgagatccg agaggacata ctatttcggt aatttttacc ggtttggctt
     1081 caaaggattc aatcgtaaga gcaggtgatg atgctaaaaa cgtcagttgg tttagcgtgg
     1141 ataagctccc ttccctcgcc tttgatcatg ctgaaataat tcaagaggtt ttagctagca
     1201 cttagtgtta gcaaatcaca taagctgaaa aacattccaa catcaatggg ttaaagtaat
     1261 attagctgca atgaaatttt tgtattttta ttggctcata aaaagtaatg gattacaaag
     1321 attattatag cattttgggg gttgctaagt cggcaacaaa agatgaaata aaaaaatctt
     1381 atcgtaagct tgccaaaaaa tatcaccccg ataaaacaaa aggtgataaa gcattagaag
     1441 aaaaatttaa ggaagtttca gaagcttatg aggtgttgag tcatgatgaa aacagaaaga
     1501 aatacgatga actaggagcc aattggaaaa atcaacaaca ggcaggaggt cccggtggat
     1561 ttgattattc gcaatattat gcaaataccg gagggcaggg tagccatcaa acctttgaag
     1621 gtgacccaga aatgttttca gagtttt
//
LOCUS       DASCQP010000123         3087 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000523836, whole genome shotgun sequence.
ACCESSION   DASCQP010000123 DASCQP010000000
VERSION     DASCQP010000123.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3087)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3087)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3087
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000523836"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(186..929)
                     /locus_tag="QF480_02060"
     CDS             complement(186..929)
                     /locus_tag="QF480_02060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05375.1"
                     /translation="MKKITLLLLVMGLAIISQAQTMFDKGVSGFSINAGIQESYWEDG
                     FYAGLQYTYKGALDLSFEYGNFTYDRDKLEGHVNKYGATFPNVPKESVLAFGAEYWVL
                     RTDPGSDRGVNVGIWAGYEMENYTDSKLLIPGEPGTEDMVEEWISGSAFAFGIDFSID
                     FAVKDGWRLQPYTWLGRVFATEKDKVDGADKTENFQGTGAGLGVILQKMLNNGSSVWL
                     GTEWDMDNLENANDTAFEVTLGFNLGFAK"
     gene            1151..1888
                     /locus_tag="QF480_02065"
     CDS             1151..1888
                     /locus_tag="QF480_02065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05376.1"
                     /translation="MKSIILVFILVTLSFGEKAIAQEYFPFPDSNAAWNTVGHNIFSG
                     FQWNFRYAVYGDTTINSVEYHKVYKMFDSTFLNPNSTYFAAIRENQNRQVFCVIPGFE
                     ETILYDFNLEIGDTIWYNIGGALCENEVVFENQTHLKVVSSIDSILLENNQYRKSWTF
                     QEESVMWDTWIEGIGSIEFYGLFFPLLSDMTLCGDFYQFACFKHNDTTLYLDNPNCER
                     CFYNLCKGCTFTNIYIKVYKNRISYQN"
     gene            complement(2359..>3087)
                     /locus_tag="QF480_02070"
     CDS             complement(2359..>3087)
                     /locus_tag="QF480_02070"
                     /inference="COORDINATES: protein motif:HMM:NF012264.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HJN05377.1"
                     /translation="GIMYDKFWTPESGFDQSHEYMDVFTSSSNFFRCKQCHAWDGLGN
                     AGSYISRAPKTTRPNVASLNLYEWAQSKTAQELFDGMKTTDNRRDITYDLASYNPATN
                     FTEGDKMPNLNQIFTDDEIWNMVKFMKDGMFDVSELYVGTYTGTYPTGSATFTDIGLD
                     GDAAAGNTYYAAKCAACHGDDGTTLIMEDKTLGKFLRSKPNEVQHKVKYGQPGSGIVA
                     QFEATVSEVRDLYKAVSDTVAYPN"
BASE COUNT         1019 a          559 c          508 g         1001 t
ORIGIN      
        1 tgctgttaac gttaaattgt atgaatagcg gcagattacg tgctttattt ctaccaaatt
       61 taattatagt ttgagaaatt taaaattaaa tcaactatta ttcataaaaa aaagatacac
      121 aaaaaaagag ggttaaagct catgttttct gagccttaac ccccttgtta atcaggtaat
      181 taatattatt ttgcaaaacc taggttgaaa cctaatgtaa cttcgaatgc agtatcgtta
      241 gcattttcta ggttatccat atcccactca gttcccaacc aaacagaact tccgttgttg
      301 agcatttttt gtaagataac acctagccct gctccggtac cttgaaaatt ctcagttttg
      361 tcagcgccat cgaccttgtc tttttctgtt gcaaacactc ttcctaacca tgtgtatggt
      421 tgaagacgcc atccatcttt aacagcgaag tcgattgaaa aatcaatacc aaatgcaaaa
      481 gcactcccag atatccactc ctctaccata tcctctgtgc ctggttcacc tggaattaag
      541 agtttggaat ctgtgtaatt ttccatttca taccctgccc aaataccaac atttacacca
      601 cgatcactac cagggtctgt tcttagtacc caatattctg cgccaaatgc tagtacagac
      661 tcttttggta cattaggaaa tgttgcacca tatttattga catgaccttc taatttgtct
      721 ctgtcatagg taaaattacc atattcgaaa gataagtcta atgctccttt gtaggtatac
      781 tgtaaaccag cataaaatcc gtcttcccaa tagctttctt gtattcctgc attaattgag
      841 aatccactta cgcctttgtc aaacatggtc tgagcctgag atattatggc tagtcccatt
      901 actagtaata aaagagtaat ttttttcatc ttattaatta ttaagagttt gggccctgtt
      961 tatttccttt ttctaatatt tttctcaaac acaaattaga accctttaga atttgcgtga
     1021 agaatttaat gcaatatacc gtttatgaaa taaaatagtt atagcatatt ctatactttt
     1081 caatagtgga atgtgaataa cttttattta aacattgtgt gtaatgccct agaaaccaaa
     1141 ctacaagaat atgaaatcaa taatattagt attcattctc gtcacattat cctttggtga
     1201 gaaagcaatt gcacaagaat attttccatt tccagactct aatgcagcgt ggaatacagt
     1261 tggacataat atattttcgg gattccaatg gaattttaga tacgctgttt acggtgacac
     1321 tacaattaac tcagtagaat accataaagt atataaaatg tttgattcaa catttttaaa
     1381 ccctaactca acatattttg cagcaattag agagaatcag aacagacaag tattttgtgt
     1441 aattcctgga tttgaagaaa caattttata tgattttaac cttgaaattg gagatacaat
     1501 atggtataat attggagggg cattatgtga aaatgaagta gtctttgaaa atcaaacaca
     1561 tttgaaagtg gtcagttcta ttgattcaat ccttcttgaa aataatcaat atagaaaaag
     1621 ttggacattt caagaagaat cagtaatgtg ggacacatgg attgaaggta ttggtagcat
     1681 agagttttat ggactgtttt ttccattgct ctcagacatg acattatgtg gtgactttta
     1741 tcaatttgca tgctttaaac acaatgacac cacattatat ttagacaatc ctaattgtga
     1801 aagatgtttc tataacttgt gtaaaggatg tacctttacg aacatttata taaaggttta
     1861 taagaataga atttcgtatc agaattaatg ggcatgtatt taaaatagag aaactaaaaa
     1921 caaatattta aaagaaaata tcatgacaaa aggtaaagac tcaaagaaga acgttaaaaa
     1981 agctcccgct aaaactccaa aagaaaaaaa agtagaaaag agactaaaga aatctaaata
     2041 agattacttg tattatcttt tactacaact gcgctcaccc tttttttgcg aattgaacga
     2101 gaaagctggg tgcagcgatt atcaggaaag cagcaagttg tttggaatgc cgaggggcta
     2161 ccataaggta tttactttta ccgaattcaa actggccaac aagtggcctc cgggaagatg
     2221 gtgctgctga agtgatggtg ccataatttg ggtactaaac aaaaaaacct ctctgctaat
     2281 ggaattgcag agaggttttt aagtgaacca tttcaaagta gatgaaatag tttttttgga
     2341 aatgtactaa tcattaatct aattagggta agccactgta tccgaaacag ctttataaag
     2401 gtctcttact tcactaactg tggcctcaaa ttgtgctact attccagaac ctggctgacc
     2461 atacttaact ttatgctgta cttcatttgg tttactcctt aaaaacttac caagtgtttt
     2521 atcttccatt attaaagttg tgccatcatc accatgacat gctgcgcatt ttgcagcata
     2581 ataagtatta ccagctgcag catctccgtc aaggccgata tctgtgaaag ttgcagaacc
     2641 tgttggataa gtaccggtat aagtaccaac gtaaagttct gatacatcaa acattccgtc
     2701 tttcataaat ttaaccatgt tccaaatttc atcatcggta aaaatctgat taaggttagg
     2761 cattttgtca ccttcagtaa aattcgttgc aggattataa cttgccaaat catatgtaat
     2821 atctcttctg ttgtcagtag tcttcatgcc gtcaaataat tcctgagcgg tttttgattg
     2881 tgcccactca taaagattta acgaggcaac atttggacga gttgtcttag gggctctgct
     2941 aatgtacgaa cctgcattgc ctaatccatc ccatgcatga cattgtttac aacggaaaaa
     3001 attacttgat gaagtaaaaa cgtccatata ttcatgactt tgatcaaaac ctgattccgg
     3061 agtccagaat ttgtcataca taatacc
//
LOCUS       DASCQP010000124         9422 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000530916, whole genome shotgun sequence.
ACCESSION   DASCQP010000124 DASCQP010000000
VERSION     DASCQP010000124.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 9422)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9422)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9422
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000530916"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(23..736)
                     /locus_tag="QF480_02075"
     CDS             complement(23..736)
                     /locus_tag="QF480_02075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004315006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJN05378.1"
                     /translation="MINLRNINKTYYTGKTSLHVLKGIDLNIKQGELVSIMGSSGSGK
                     STLLNIIGMLDNYDTGVFNLNDKTIKNLSEKNAAHLRNKFIGFVFQSFNLVSFKNAME
                     NVALPLYYQKVSRKQRNSLAMEYLDRMGLADWAHHLPNELSGGQKQRLAIARALISKP
                     KVILADEPTGALDSATSIEVMKLFKEIHQSGITILIVTHEREIAAETERIIRLKDGVI
                     DTIVEIGQRREWLASQAMA"
     gene            1100..2623
                     /locus_tag="QF480_02080"
     CDS             1100..2623
                     /locus_tag="QF480_02080"
                     /inference="COORDINATES: protein motif:HMM:NF014567.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HJN05379.1"
                     /translation="MDIYTRKRRWKIVLSILGIVIIGASLFYTNLIVRKFAAEERKNV
                     RLWADAVQRKARLVRYTEFFFGQLQEQERKRVELLANVYKQLLDEDQSEFTFYLEIIS
                     DNNTIPIVLTDNKGWVIDSRNLDIEQDTMLRLSGKRKEEFTVYDPITVQLPSRKNYLY
                     YKDSRFFSELRDVLNNYVASFMSEVALNSSSVPVIITDSTHNKVLMFGNLNDIKMADP
                     YYVEDKLEEMARENRPIKVNLGDQGTSYIYYQDSELLTIIKYFPLTQILIIAVFAAIA
                     YLLFSFARRSEQNRVWAGMARETAHQIGTPLSSIMAWLELIKIDKGNIDQATVEIEND
                     VQRLEMITERFSKIGSAPTLEQNDIIKILVDSISYLVPRTPKKIKYQLNFNKDNELFV
                     PVNSALFSWVVENLCKNAIDAMGGYGVITIDLNDEPKNIIIDIIDTGKGISTSEQKAI
                     FNPGYTSKQRGWGLGLSLSRRIICDYHKGKLFVKSSAAGKGTTFRIILKKALLISEI"
     gene            complement(2688..3236)
                     /locus_tag="QF480_02085"
     CDS             complement(2688..3236)
                     /locus_tag="QF480_02085"
                     /inference="COORDINATES: protein motif:HMM:NF013283.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HJN05380.1"
                     /translation="MIRHIGPSLIYDSRLNRYNARQGMFFATYFTSFQKFLGSQYIFN
                     SLSMDFRKYFNPWLEHIIAFQVTNTYNYGNVPFFHLSMMGGSDRMRAYYLGEIRDKIL
                     IDTQVEYRMPIWKIFGMVGFFGAGRVYPAYSDLTFKDMYFSSGLGLRIMVDSENKANL
                     RLDFAYGENGAKAFIFGFAEAF"
     gene            complement(3209..3838)
                     /locus_tag="QF480_02090"
     CDS             complement(3209..3838)
                     /locus_tag="QF480_02090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05381.1"
                     /translation="MNSRLIIFLLISIFLSSSMLIKSQESEQLQSEKDTTLSAFDRFN
                     KKAEHLFKIIPVPFVTYTQETGTSFGLAKYNLVHLSKKDTISQASKFAGVVTISTNGN
                     MKLSGGADINFGKGKYYMITGIAVMKFPELIWGIGNIVDHKNREKILIEKWELTLNGL
                     YEMKENFYFGFNYAFSDYWNIGKEDTSFLIQQNITGANGGILSGTLVHH"
     gene            complement(3850..4263)
                     /locus_tag="QF480_02095"
     CDS             complement(3850..4263)
                     /locus_tag="QF480_02095"
                     /inference="COORDINATES: protein motif:HMM:NF016056.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DCC1-like thiol-disulfide oxidoreductase family
                     protein"
                     /protein_id="HJN05382.1"
                     /translation="MKSKMEAKPIIIFDGVCNLCNSLVNFIIQRDKCCKLRFTPSQSH
                     AGINIRKKYGITLMDFETIVFINNSVVFTKSEAIIEVARYLDGWWKFITFIKIFPSFL
                     RDGLYSKIAKNRYNWFGKKEGCMVPSKDINNRFLI"
     gene            complement(4290..4694)
                     /locus_tag="QF480_02100"
     CDS             complement(4290..4694)
                     /locus_tag="QF480_02100"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF024675.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016790 - thiolester hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HJN05383.1"
                     /translation="MKEFIFRCEMEVRDYECDLQGVVNNSVYQNYLEHTRHCYIKSIG
                     IDFAELKEKGIYLMVKRVEIDYQAPLKSGDKFISALRMERISPLRFGFVQHIYRIPDN
                     RLMIKALVIGTAVNEQGRPELPPELVKVWGIE"
     gene            4954..5583
                     /locus_tag="QF480_02105"
     CDS             4954..5583
                     /locus_tag="QF480_02105"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019539771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HJN05384.1"
                     /translation="MKTIKNLEFPDLGYSYDSLEPYIDATTMEIHYTRHHKAYFGNLK
                     AAVEGTDLENETLENIFKDISKYPVAVRNNGGGHYNHTLFWSIMSPDGGGRPSGKLLE
                     AITAKFGTFEEFQSEFETAAKTRFGSGWAWLCVDDDKSLSVCSSPNQDNPLMDIHNCK
                     GTPILCLDVWEHAYYLKYQNKRPDYVSAFWNVVDWSEVEANYNRALVAS"
     gene            5800..6597
                     /locus_tag="QF480_02110"
     CDS             5800..6597
                     /locus_tag="QF480_02110"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HJN05385.1"
                     /translation="MNKRKPILYEYLLLLFIVLVGSILRFWDYGNIPFMHDELSALSR
                     LQFNNFNDLIREGVMLGDTHPAGVQVFLYYWTALVGTSEIMVKLPFILSGILSIWISY
                     LIGRLWFDGTTGLLTAACISSLQFFVMYSQIARPYASGLLITLIMVYVWSLYFFKKRK
                     SIYLILYVLFGAMATYNHHFSLLFAAIVGISGLFIVKKKNLLEYFIAGLAIFILYIPH
                     LHIFFTQLAQGGIGGEGGWLAKPESIFIFQFLHWVFHFPCGHGQYLL"
     gene            6597..7748
                     /locus_tag="QF480_02115"
     CDS             6597..7748
                     /locus_tag="QF480_02115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05386.1"
                     /translation="MILYIILVRGDFVVFDNAKKKRWFLITWFILPIIIGFAYSIFLN
                     PIIQYSMLIFSTPYLFILLFSYHKKLSQKQNTVLVLVILLVNTSTLVFERNHYNIFYK
                     QPYEETFKKALLTYNTDDVFLIDDCIPYYHEFFFNKYNKRIPYFTKRNTNIDLTGFEK
                     IIANIKEGNVIAEALTGEQLQIIQSYFPYQLGYENGFTYEIYTFSKMAPVDGFVIERD
                     IIAQTDFKNEIGSWKDVKYMVEFDTLNNNSFCRMESSNEWGPSISFPLLQIAEGGLGV
                     VDVEVEMMMLDTITNALIVATISEGEETRYWKAVNFESYNHQPNKWKKVFLSVDIQGA
                     LKSRRDMDGLVLKINIWNRAKTKLLINSITIYRKQGNPLRYSLFSQDYL"
     gene            8276..8650
                     /gene="rpsL"
                     /locus_tag="QF480_02120"
     CDS             8276..8650
                     /gene="rpsL"
                     /locus_tag="QF480_02120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005853956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HJN05387.1"
                     /translation="MPTIQQLVRKGRKKLIDKSKSPALDSCPQRRGVCVRVYTTTPKK
                     PNSAMRKVARVRLTNGKEVNAYIPGEGHNLQEHSIVMIRGGRVKDLPGVRYHIIRGAL
                     DTSGVEGRTQRRSKYGTKRPKK"
     gene            8677..9144
                     /gene="rpsG"
                     /locus_tag="QF480_02125"
     CDS             8677..9144
                     /gene="rpsG"
                     /locus_tag="QF480_02125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009597682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HJN05388.1"
                     /translation="MRKAKPKIRIILPDPKFKDVLVTQFVNNMMFGGKKSTAYKLFYE
                     AMDIVAEKSNEDPVEVWKKALANVTPAVEVRSRRIGGATFQIPSEIRPSRKMSIGMKT
                     LIGFSRKRHEKSMGKKLAGEILAAYKEEGAAFKKKEDTHRMAEANKAFSHFRF"
     gene            9168..>9422
                     /locus_tag="QF480_02130"
     CDS             9168..>9422
                     /locus_tag="QF480_02130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009859547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HJN05389.1"
                     /translation="MATLEKHIDKLQNTRNIGIMAHIDAGKTTTTERILYYTGRNYKM
                     GEVHDGGATMDWMIQEQERGITITSAATTVYWCGMADQYSE"
BASE COUNT         3105 a         1452 c         1672 g         3193 t
ORIGIN      
        1 agatcgaaca tagtttgagt ttttatgcca tggcttggga tgcaagccat tctcttcttt
       61 ggccaatttc tacaattgtg tcgattacac catcttttaa tctgatgatt ctttctgttt
      121 cggcagcaat ttctctttca tgagtcacaa ttaatattgt aattcctgat tgatggattt
      181 ctttaaaaag tttcataact tcaattgaag ttgctgaatc gagtgctcct gttggttcgt
      241 cagcaagtat aactttaggt tttgaaataa gagcccgtgc tattgcaagc ctttgtttct
      301 gtccgcctga aagttcattt ggaagatggt gagcccaatc ggcaagtccc attctgtcaa
      361 ggtattccat tgccaacgaa tttctttgtt tacgacttac tttctggtaa tatagaggaa
      421 gggcaacgtt ttccattgca tttttaaatg aaacaaggtt aaacgattga aatacaaatc
      481 caataaactt gtttctaagg tgagcagcat tcttttcact cagatttttt atggtcttgt
      541 cgtttaagtt aaacactcct gtatcgtaat tatctaacat acctatgata ttaagtaggg
      601 tagatttgcc tgaacctgag gaccccatta ttgatactaa ctctccttgt tttatgttca
      661 aatcgatacc ttttaacaca tgaaggctcg ttttacctgt gtaataggtt ttatttatgt
      721 tccttaaatt aatcatacac gttgcgaatt ttaatataaa ccatcatttc tttaacgata
      781 attatgccat tgtgtgtatg tggctgataa tgtgctaata atactttatg tacattgtaa
      841 tagtgtacga gcatattaca taatgtgtgc gaaaacgtgc atatctcagg gcaagagaaa
      901 tattatatgg aataactagt tattttgatt gattatggca aggctcatct tttcgcactc
      961 ttttcggtgt gatcattcat tgtagcttaa tcattcattt tgtattccaa tttttagttt
     1021 ttattctcat gcaataatgt aattaataat aagttataaa tttgtctcaa aaaggtatca
     1081 caattaactc ttttgataaa tggacattta tactaggaaa aggcgatgga aaatagtgct
     1141 ctcaattctt ggtattgtaa ttataggagc gtcattattt tacacgaacc tcatagtaag
     1201 gaagtttgcg gctgaagaac gtaaaaatgt tcgtttgtgg gccgatgctg ttcaacgtaa
     1261 ggctcgtctt gttagatata cagaattctt ttttgggcaa ttgcaagagc aagaaaggaa
     1321 aagggttgag ttgttagcta atgtttacaa acaactactt gatgaagatc agtcagagtt
     1381 taccttttat cttgaaatca tatctgataa caatacaatc ccgattgtat taacagataa
     1441 taaaggttgg gttatagatt ccagaaatct tgatattgag caggatacaa tgttaagatt
     1501 atcaggtaaa agaaaagagg agtttacagt atatgatcca ataacagttc aactgcctag
     1561 tagaaagaat tatctctatt ataaggactc aagatttttt tctgagctga gggatgtcct
     1621 taataattat gtagcctctt ttatgtcaga agttgcctta aactcgtcaa gtgttcctgt
     1681 gattattacc gacagcacac acaataaagt tttgatgttt ggaaatttga atgatattaa
     1741 aatggctgat ccttattatg tagaagataa attggaagaa atggcacgtg aaaatcggcc
     1801 aataaaagtt aatctgggtg atcagggtac atcctatata tattaccagg attctgaatt
     1861 attgacgatc attaagtatt ttccattaac acaaatattg attattgcag tatttgcagc
     1921 tattgcctac ttgttgttca gttttgctag aaggtcagag caaaatcgtg tttgggctgg
     1981 aatggcgcgt gaaacggcac atcaaatagg gacacctctt tcgtcaatta tggcttggct
     2041 tgagctgatt aaaattgata aagggaatat tgatcaggct acggttgaaa tagaaaatga
     2101 tgttcagcgc ttagaaatga taactgaaag attttcaaaa attggctctg caccaacgtt
     2161 agaacaaaat gatattatca aaatacttgt tgatagcata tcttatttag taccacgcac
     2221 cccaaagaaa attaaatatc aattaaattt caataaagat aatgaactat ttgtgccggt
     2281 taattctgcc ctttttagct gggtagtgga aaatttgtgt aaaaatgcaa ttgatgctat
     2341 gggtggttac ggtgttataa ctatagattt aaatgatgaa cctaagaata ttattatcga
     2401 cataattgat actggcaaag gaatttccac gtctgaacaa aaagctatat ttaatcctgg
     2461 ctatacaagt aaacagcgtg gttggggatt agggctttct ttgtcaagaa gaatcatttg
     2521 tgattatcac aaaggaaaac tttttgtaaa aagttcggct gccggtaagg gaactacttt
     2581 tcggattatt ttgaagaaag cacttctgat aagtgagatt taattctttc caatctttgg
     2641 actcatattt attattatgg aattgtgtta gtattcagat aaaagttcta aaacgcttcg
     2701 gcaaatccaa aaataaatgc tttggctcca ttttcaccat atgcaaagtc caatcttaag
     2761 tttgctttat tttcactgtc taccattatc ctcagaccaa ggccacttga gaaatacatg
     2821 tctttaaaag tcaagtcact ataggcggga tatactcttc ctgcaccgaa aaaacccacc
     2881 ataccaaata tcttccatat aggcattctg tattctacct gagtgtcgat tagtatttta
     2941 tctctgattt ctcctaaata atacgcacgc atcctatcac taccacccat catagaaaga
     3001 tggaaaaaag gaacattccc ataattgtat gtgttggtta cctgaaatgc aattatgtgt
     3061 tctaaccacg gattaaaata ttttcgaaaa tccatactta aagaattaaa aatatactgg
     3121 cttccaagaa acttttgaaa gcttgtaaag taggtagcaa aaaacatccc ttgtcttgca
     3181 ttatatctat ttagcctact atcgtaaatt aatgatggac caatgtgccg gataatatcc
     3241 caccattggc tccagttata ttttgttgta tcaggaaact tgtatcttct ttaccgatgt
     3301 tccagtaatc agaaaaagca taattgaaac caaagtaaaa attttctttc atttcatata
     3361 gaccgtttag tgttaactcc catttttcta ttaaaatctt ttcccgattt ttgtgatcaa
     3421 caatattacc aataccccaa atcaattcag ggaatttcat gacagctatt cctgtaatca
     3481 tataatattt tcctttgcca aaatttatat cagcaccccc acttagcttc atattaccat
     3541 tagttgaaat agttacaact ccggcaaatt tggaagcctg tgaaatagta tctttttttg
     3601 aaagatgaac cagattatac ttcgcaaggc caaatgatgt accggtttcc tgggtatatg
     3661 tcacgaaagg aactggaata attttaaaaa ggtgctcagc ctttttgtta aagcgatcaa
     3721 aagctgataa ggtagtgtct ttttctgatt ggagttgttc tgactcttgt gacttaataa
     3781 gcatcgaaga tgaaagaaat attgaaatta acagaaaaat aattaatcgt gaattcataa
     3841 agaatttaat taaatcaaaa atctgttatt aatatcttta gaaggaacca tgcaaccttc
     3901 ctttttccca aaccaattat atctattttt tgcaatcttc gaatataaac catctctcag
     3961 aaagctggga aaaattttga taaatgtaat gaatttccac catccatcca gatatcttgc
     4021 aacctcaatt attgcctcac tttttgtaaa gacaacacta ttattaataa atacaattgt
     4081 ttcaaaatcc atcaaagtaa taccatactt ttttcgaatg ttaatgcctg catgagattg
     4141 tgaaggagta aaccggagtt tgcaacattt atccctttgt attatgaagt tcactaaaga
     4201 attgcaaagg ttgcacacac catcaaaaat aatgataggc ttagcttcca ttttgctttt
     4261 catagtttct ttatgtttat tcaatacacc tattcaatac cccaaacctt cacgagttcc
     4321 gggggtagtt ctggtctgcc ttgttcgttt actgcagttc ctattacaag tgccttaatc
     4381 attagtctat tatctggaat gcggtatata tgttgaacaa aaccgaatcg caagggggaa
     4441 atccgttcca tccgtaatgc cgaaatgaat ttatccccac ttttcaaagg tgcctggtaa
     4501 tctatctcaa ctcgttttac cattaaatat attccttttt ctttcaactc agcaaaatca
     4561 attccaatcg atttgatgta gcaatggcgt gtatgttcaa ggtaattttg gtacaccgaa
     4621 ttattaacca ccccttgcag atcacattcg taatctctta cttccatctc gcaacgaaaa
     4681 atgaactctt tcatattctc acaattatta atgtaaaaaa ctacatatag ttttaattct
     4741 agaattttga ggtaaaatta gtaatgattt cttacagtaa tagaaattta ctcattctac
     4801 aattaaaatg tacggtaacc tgatacattg attgggatag attgtcttta aaagaaagat
     4861 gctcccaatt tgcaatatta ttatttataa tgattctaaa taaataattt atattatctt
     4921 tgcaccttca aatgataata aaaaatagat aaaatgaaaa caataaaaaa tttagaattt
     4981 cctgatttag gatatagtta tgactcgtta gaaccatata ttgatgctac tactatggag
     5041 atccattaca ctagacacca caaagcttac tttggtaatc taaaagcagc tgttgaagga
     5101 acagatttag aaaatgaaac tttagaaaat atatttaaag atattagtaa atatcctgtc
     5161 gcagttagaa ataatggagg cggacattat aaccatactt tgttttggtc aatcatgtca
     5221 cctgatggtg gaggaagacc gtctggtaaa ttgcttgaag ccataacagc taaatttgga
     5281 acgtttgaag aatttcaaag cgagtttgaa acagctgcaa aaaccagatt cggaagcggt
     5341 tgggcatggt tatgtgtaga tgacgataaa tctttaagtg tgtgctctag tccaaaccaa
     5401 gacaatccgt taatggatat tcataattgt aagggaacac caatattatg tctggatgtt
     5461 tgggaacatg catattattt aaagtatcaa aacaaacgcc ctgattatgt tagtgcattt
     5521 tggaatgttg ttgattggtc tgaagtagaa gcaaattata atagagctct agtggctagt
     5581 tagttttact taacttggtt gttacttcaa caaccattct tttgatttta ttatattaaa
     5641 gactatactt cacaggcatg gtctttttct tttttagaga aaattcaatt aaaggaaact
     5701 gacttgaata tttctccaat tattcttttg attataacta accagaatca gttttctgta
     5761 aatcgctatt tttgacaaca ttaattgagt tatagtaaaa tgaataagag aaaaccaata
     5821 ttatacgaat atttactact attatttatt gtccttgtag gttcgattct gagattctgg
     5881 gattatggaa atatcccttt tatgcatgac gaacttagtg cacttagcag attgcaattc
     5941 aataatttta atgatcttat cagggaagga gtgatgcttg gggatactca ccctgctgga
     6001 gttcaggttt ttctttatta ctggacagcc cttgttggca cgagtgagat aatggtgaag
     6061 ttacctttta tactttctgg aattctatca atatggataa gttatttgat tggaagatta
     6121 tggtttgatg gaacaacagg cttgttgaca gcggcatgta tatcttcgct tcaatttttt
     6181 gtcatgtata gtcagatagc acgtccttac gctagcggtt tattgattac tttaataatg
     6241 gtatatgtgt ggagtttgta cttttttaaa aaaaggaaat caatatacct tatattatat
     6301 gtgctgtttg gggcgatggc tacttataat catcatttta gtttattgtt tgctgcaatt
     6361 gttggtatta gtggtttgtt tattgttaag aaaaagaatt tacttgaata ctttattgct
     6421 ggactagcta tatttattct ttatatccct cacctgcata ttttcttcac tcaattggca
     6481 caaggtggga ttggaggtga aggaggttgg cttgctaagc ctgaatcaat atttattttt
     6541 cagtttcttc attgggtttt tcattttccg tgtggacatg gacaatattt attgtagtga
     6601 tattgtatat cattttggtc agaggtgatt ttgtagtctt tgataatgca aagaaaaaaa
     6661 gatggtttct aattacatgg tttatattgc ccataataat tggttttgca tattcaatat
     6721 ttttaaatcc gattattcaa tattcaatgt tgattttctc aacaccatac ttatttattt
     6781 tgttgttttc ttaccataag aaattatcgc aaaaacagaa tacagtgtta gtattggtga
     6841 ttttattagt aaatacctca acacttgtat ttgagaggaa ccactataat attttttata
     6901 agcaacctta tgaagaaaca tttaagaaag ctcttttaac ttataatact gatgatgttt
     6961 ttttgattga tgactgcatt ccttattatc atgaattctt ttttaacaaa tacaataaga
     7021 ggattcctta ttttactaaa agaaatacaa atattgattt aactggtttt gaaaagatta
     7081 tagccaatat taaggaagga aacgttattg ctgaagcttt aacaggagag caacttcaaa
     7141 ttattcagtc atattttccg tatcaattgg gttatgagaa tggatttaca tatgaaatat
     7201 atacattctc aaaaatggct ccagtagatg gatttgtaat tgaaagagat attattgccc
     7261 aaactgattt taagaatgag ataggaagtt ggaaagatgt gaagtacatg gttgaatttg
     7321 atactctcaa caataacagt ttttgcagga tggaatcctc taatgaatgg ggtccctcaa
     7381 taagttttcc tttactacaa attgctgaag gtggactggg tgttgtagat gtagaggtag
     7441 agatgatgat gttggataca ataacaaatg cattgattgt tgcaactata tcagaaggtg
     7501 aagaaaccag atattggaaa gcagttaatt ttgagtcata taatcaccaa ccaaataaat
     7561 ggaaaaaagt atttctaagt gttgacattc agggtgcatt aaaaagcaga agagatatgg
     7621 atggactggt acttaaaatt aacatttgga atcgagcgaa aaccaaactc cttattaata
     7681 gcattacgat ttacagaaaa caaggtaatc cactgaggta tagtttgttt agtcaggatt
     7741 atttgtagta ccattgagaa aactacaata ataaaccttt cttattgttc ataggggcaa
     7801 aattagaact ttaccgatta atgatattcg gaaaatattt accaaatgaa agtcttaatt
     7861 taattattgc cgtgagaaaa tcttgatctt atctccaaaa aactagttgg cactttttaa
     7921 aaaacggatg atttttatct tcttcaacca cctttatcag gatggtaaaa tattttaaaa
     7981 ataattcgtc aacttattgg taataaaaaa taaattttta cctttgcagc ccgttttgag
     8041 taagatatta cgaaacttac tgaaacagta atagttatag gaacctgaca aggtaaaacg
     8101 atataggttt ccggcgcaat aaagtaagat ttaagtttgt tgtgtggttt aaaatcctcc
     8161 tccggtatat ctccttgaaa atttcctgaa attattaaaa agtaaatggg gtttgtgtaa
     8221 aatgatttta tacttttgcg cctccaaaat ttgaggagtt aataacaata aaaatatgcc
     8281 tacaatacaa cagttagtaa gaaagggaag gaagaaactt attgataaaa gtaagtctcc
     8341 tgctcttgat tcgtgtccgc aacgtcgtgg tgtttgtgta agagtttata ctactacgcc
     8401 aaaaaaacct aattcagcta tgagaaaagt tgccagggtt agactaacta acggaaaaga
     8461 agttaatgct tacattcctg gagaaggtca taatctgcaa gagcactcaa ttgttatgat
     8521 tagaggtggt cgtgtgaaag atcttcctgg tgttaggtat cacatcattc gtggtgcact
     8581 tgatacttct ggtgtcgaag ggcgtactca acgtcgatca aagtatggaa caaaacgtcc
     8641 taaaaaataa tagttaacaa tataagcttt atataaatga gaaaagcgaa accaaaaata
     8701 cgtattatcc ttcctgatcc taaatttaaa gatgtattgg taactcaatt tgtgaacaat
     8761 atgatgtttg ggggtaaaaa aagcacagcc tacaaattat tttacgaagc tatggatata
     8821 gtagctgaaa aaagtaatga ggatccggta gaagtctgga aaaaagcttt agctaatgtt
     8881 actcctgctg tagaagttag aagcagacgt attggcggtg ctacttttca aattccttca
     8941 gagattaggc ctagtagaaa aatgtcaata ggaatgaaaa ccctcatagg tttctcccgt
     9001 aaacgtcatg aaaaaagtat ggggaaaaaa cttgccggtg aaattcttgc agcatataaa
     9061 gaagaaggag cagcttttaa aaagaaagag gatactcata gaatggcaga agctaataaa
     9121 gcattttcac atttcagatt ttagtatctc gatagtttgg taaattaatg gcaacgctgg
     9181 aaaaacatat agataaactt caaaatactc gtaatattgg tattatggca catattgatg
     9241 ccggtaagac cactactaca gagcgcattt tgtattacac aggccgtaat tacaaaatgg
     9301 gtgaagttca tgatggcggt gctacaatgg attggatgat tcaggagcag gaaagaggta
     9361 ttacaattac ttcagctgct actaccgtat attggtgtgg tatggcagat caatattcag
     9421 ag
//
LOCUS       DASCQP010000125         2550 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000542030, whole genome shotgun sequence.
ACCESSION   DASCQP010000125 DASCQP010000000
VERSION     DASCQP010000125.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2550)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2550)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2550
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000542030"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..482)
                     /locus_tag="QF480_02135"
     CDS             complement(<1..482)
                     /locus_tag="QF480_02135"
                     /inference="COORDINATES: protein motif:HMM:NF024910.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HJN05390.1"
                     /translation="MKNSTSSKHYLSVFSLAMLSVAAVMSLRGLPMMAKEGLSMIFYI
                     LFSSLLFLIPVSLVSAELATGWPKSGGVYRWVKEAFGSNTGFIAIWLQWLQNVIWYPT
                     VLSFAAAGLSYLFLDQSLANNKFFNFAVILIVYWGATFASFKGMKTAGKIATYGVIGG
                     T"
     gene            complement(493..2031)
                     /locus_tag="QF480_02140"
     CDS             complement(493..2031)
                     /locus_tag="QF480_02140"
                     /inference="COORDINATES: protein motif:HMM:NF012345.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="discoidin domain-containing protein"
                     /protein_id="HJN05391.1"
                     /translation="MNLTPSKFKNFSFIFFVFVLLNSCSQKDNCVNFIIPPSLTNNPS
                     FDVICTNDRPLITFFNTKCGVEPIMYTIQIASDKQFTDILIEYNNVKAKTELITSKLL
                     EEKDRLPIDKQYYYWRVKATDKLGNESSWTSSRFYLDTKSDDHFMNLKRVKVDLVAVS
                     NGANTENIIDLTDIGNTTHWEPPPPYKTHPWVEFTFPEPTEFSRIWMLSNPNSKEGWL
                     TDFYWMSSLDGKNWTKIEETVTTDNHTFRNIIDFTPVSAKYLKLIINDFYGYAPQVYT
                     AVFYSPGSPEPPIVPDDDYVLLVGDQYNGFTFTQLAEFVEGLDLNLKTVTIPHYEISL
                     DILESLNPQPVAIIFSGNNANYPNLPMYEFNGGFEIVRNSDIPILGICAGHQLEVMAY
                     GYTYAHSTGWFDNTILNIETEVVPDSIEIIKKSPVFKNIPNPFFGVEIHSWATAEEVF
                     SIIGFELLAKSSYVQVQKIKGRMVFGEQFHAEVDISANQGKPMIYNFLSLALNHKNNT
                     NINN"
BASE COUNT          851 a          444 c          382 g          873 t
ORIGIN      
        1 gttcctccaa taactccata agttgcaatt ttaccagccg tcttcatacc tttaaaactt
       61 gcaaatgttg caccccaata aacaattaat ataactgcaa aattgaagaa cttgttatta
      121 gcaagtgatt ggtcaagaaa caagtaagac aaacctgctg ctgcaaaaga cagaaccgtt
      181 gggtaccata ttacattttg caaccactgg agccatatag caataaaccc cgtatttgac
      241 ccaaatgctt cctttaccca acgataaact cctccagatt taggccatcc agttgctaat
      301 tcagctgaca ccaatgaaac aggtattaag aacaaaagtg atgaaaatag tatataaaat
      361 atcattgaca ggccttcttt tgccatcata ggtaatcctc tcaaactcat aacagcagct
      421 acacttaaca tggctaagct gaatacactt aaataatgtt tactagaagt agaatttttc
      481 atctttatta ttttagttat taatatttgt attattctta tggtttaaag ctaatgacaa
      541 aaaattataa atcattggct tcccctgatt tgcacttata tccacttcag catgaaactg
      601 ttctccaaat accattctac cttttatctt ctgtacctga acatatgaag attttgcaag
      661 taactcaaaa cctattattg aaaatacttc ttctgcagtt gcccaactat gaatctcaac
      721 accaaaaaat ggatttggta tatttttaaa aacaggcgac ttcttaataa tttctattga
      781 gtcaggtacc acttccgttt caatatttaa aattgtatta tcaaaccagc ctgtactatg
      841 tgcataagta tatccgtatg ccattacttc taattgatgg cctgcacata ttcccagaat
      901 aggtatatca ctgtttctaa cgatctcaaa tccaccatta aactcataca ttggaagatt
      961 tggatagttt gcattattac cactaaatat aattgcaacc ggttgtgggt ttaacgactc
     1021 caaaatgtct agggatattt cgtaatgagg tattgtaact gttttcaggt taagatcaag
     1081 tccctctaca aattctgcca gttgagtaaa agtaaagcca ttatactgat ctcctactaa
     1141 tagtacataa tcatcatcag gtacaatggg tggttcagga cttcctggag aataaaaaac
     1201 tgcagtatat acttgtggag catacccgta aaaatcatta attattaact ttaggtactt
     1261 tgcggagaca ggtgtaaaat caattatgtt tctaaacgta tgattatcag tagttacagt
     1321 ttcttcgatc ttagtccagt ttttcccatc taaactgctc atccaataaa agtcagttaa
     1381 ccatccttct ttcgaattag ggttcgaaag catccatatc ctactaaatt ctgttggttc
     1441 tggaaacgtg aattctaccc atggatgggt tttatacggt ggcggtggtt cccaatgtgt
     1501 tgtatttcct atatcagtta aatcaataat attctctgta ttggctccat ttgatactgc
     1561 tactaaatca acttttactc ttttgaggtt cataaaatga tcatctgatt tagtatctaa
     1621 ataaaatctt gatgatgtcc aactactttc attcccgagt ttgtcagtag cttttaccct
     1681 ccagtaataa tattgtttgt caatgggtaa tctatctttt tcttccagaa gtttagaagt
     1741 aataagttca gttttagctt taacgttatt gtattcaatt agaatatcag taaattgctt
     1801 atccgatgct atttgaatag tgtacattat tggttcaaca ccacactttg tgttaaaaaa
     1861 agttattaat ggtctatcat tagtgcaaat tacatcgaat gaaggattgt tggtaaggct
     1921 cggtggaata ataaaattaa cacaattatc cttctgcgaa caggagttta acaaaacgaa
     1981 tacaaaaaag atgaatgaaa agttcttgaa tttactgggt gttaaattca taattagaga
     2041 gttaggtttt cttatgtgcc aaatataaca aaaattatta atattttcta ttaatgaaaa
     2101 attgttattg ttaaatggcg gtgtaattac acttatttga taaataattc tgcgtcaaat
     2161 tttcagagag tatactagct taaattataa gcataactga atctttagcg atcgttttgc
     2221 actattaata tttatactta aaaataatag ctagttaata gtggcctaat gctcacttca
     2281 taaagaaact ttatcctttt gataatgcgt gttaaacgat caattagctg aattgactgg
     2341 aatttttagg atcgactttg aatcctgtaa aatgaatggt tatttagaaa cggtgcctat
     2401 tagaagctat atctaaaagc aattagaaaa tttcttccag gagcagttat tcctgatgaa
     2461 tacgtcctat atctataatc cagaatattg tctaacccaa aagatgtaat aaatttttca
     2521 ttaaatgcat aacttcccat aaagtttaaa
//
LOCUS       DASCQP010000126         2271 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000542605, whole genome shotgun sequence.
ACCESSION   DASCQP010000126 DASCQP010000000
VERSION     DASCQP010000126.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2271)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2271)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2271
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000542605"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..285
                     /locus_tag="QF480_02145"
     CDS             <1..285
                     /locus_tag="QF480_02145"
                     /inference="COORDINATES: protein motif:HMM:NF014567.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HJN05392.1"
                     /translation="CSTNPKVIVSATLKDKKINLSIEDNGIGIPPSYQNKIFSKFFRV
                     PTGDVHNVKGFGLGLHYVKNIVKAHGWKIHLESEQDKGSKFVIIVPIKKA"
     gene            282..977
                     /locus_tag="QF480_02150"
     CDS             282..977
                     /locus_tag="QF480_02150"
                     /inference="COORDINATES: protein motif:HMM:NF012301.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HJN05393.1"
                     /translation="MNKRPRILYVEDDIYLSFVTKDNLELAGYDIVCCEDGEQALVAF
                     SNSDFELCIIDVMLPKLDGFSLAEAIRKQNINIPILFLSAKSLKEDRIKGLEIGGDDY
                     ITKPFSIEELLLKIEVFLKRSNVVTQKIVEKNVKIGELKFDFDNLELSKNNNSQRITL
                     REAELLNLFCQNKNKVLTRDEILNNIWKDDSYFQGRSLDVFVSRLRKLLKNEPSVKIE
                     NIHRVGFILTTDF"
     gene            1101..>2271
                     /locus_tag="QF480_02155"
     CDS             1101..>2271
                     /locus_tag="QF480_02155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05394.1"
                     /translation="MKNLILVVLISLISSLSYSQGSESVNHKLTVNINPETSEISVID
                     SINIIGEFKNEFLLNADLTPVSLTKDISLVKIVEDAGASDVGMDRDDADGESKLKLNK
                     WRIEGSAINFVITYKGIIKYEIEQSEENYQRGFSESPGIIDNIGIYLAGSTYWVPVFK
                     DKLATFSLTTELPIGWKNVTQGKRTNDEITSDKHIDTWVCNSPQEEIYLIAAEFTEYS
                     HDMNSGIKAMAFLRNPDEGLANKYLEVTEQYMEMYQSMLGDYPYSKFALVENFWETGY
                     GMPSFTLLGEKVIRFPFILHSSYPHELLHNWWGNSVYIDFKSGNWCEGITAYMADHLI
                     KEQRGAGDEYRRSTLQKFSNLVDAENDFPLSEFTSRYDGPSEAIGYGKSLMMWQML"
BASE COUNT          793 a          320 c          452 g          706 t
ORIGIN      
        1 tgcagtacta atccaaaagt aattgtttca gctacattga aagataagaa aattaatttg
       61 tcaattgagg acaacgggat aggaattcct ccatcatatc agaacaaaat attcagtaag
      121 tttttcaggg ttccaacagg agacgtccat aacgtaaaag gtttcggatt aggattgcat
      181 tatgtaaaaa atattgtaaa ggcgcacggc tggaaaatac atctagaaag cgaacaagat
      241 aaaggaagta aatttgtaat tattgtacca attaaaaaag catgaacaaa agacccagga
      301 ttctttatgt tgaagacgat atttatctga gttttgtaac aaaggataac ctcgaattag
      361 ctggatatga tatagtttgt tgtgaagatg gagagcaggc tcttgtggct ttttcaaaca
      421 gtgatttcga actctgcatt attgatgtta tgttgccaaa acttgatggg ttttcacttg
      481 cagaggcaat tagaaagcag aacattaata ttcctatttt attcttgtcg gccaaatcat
      541 tgaaagaaga tcggattaaa gggttggaaa tagggggcga cgattatatt acaaaaccat
      601 tcagtattga agagttgttg cttaaaattg aagtcttttt aaagagaagt aatgttgtaa
      661 cacaaaaaat agttgagaaa aatgttaaaa ttggagaatt gaaatttgac ttcgataatc
      721 ttgaattatc taaaaacaat aattcccaac ggattacact tcgtgaagca gaattgttaa
      781 acctgttttg tcaaaataaa aacaaggttc tgacaagaga tgagatatta aataatattt
      841 ggaaagacga tagttatttt caaggccgta gtctcgacgt ttttgtctct cgtttacgaa
      901 aattacttaa aaatgagccc agcgtgaaga ttgaaaatat tcatagggtg gggtttatcc
      961 ttacaacaga cttttgagat tccatttcta tttcgggcag attacttaat cccaaattaa
     1021 aattaagtat tggatagaaa ttcaattgta taaatttcta acacggatga tttcctattt
     1081 ttgtaagaaa atacatagta atgaaaaatc taattttagt agtacttata tctctgatca
     1141 gttcgctttc atattctcaa ggcagtgagt cggttaacca taaactaact gtaaacatta
     1201 atcctgagac atcagaaatt tctgtgatag actcaataaa tattattggt gaattcaaaa
     1261 atgaattttt acttaatgct gatttaacac cagttagtct tactaaagat atatctttag
     1321 ttaaaatcgt tgaagacgca ggcgcatcag atgttggtat ggatagagat gatgccgatg
     1381 gggaaagtaa actgaaatta aataagtgga gaattgaagg gtccgctatt aattttgtca
     1441 ttacatacaa agggataatt aaatatgaaa tagagcaaag tgaggaaaat tatcagcgag
     1501 gtttttcgga gtcacccggc attattgata atatcggcat ttatcttgca ggctcaacct
     1561 attgggtacc tgtgtttaaa gataaattag caacattctc attaactact gaattaccca
     1621 taggctggaa aaatgtaacc cagggaaaac gtacaaacga tgaaattaca tcagataaac
     1681 atattgacac atgggtatgt aacagccctc aagaggaaat ttatctaatt gctgctgagt
     1741 tcaccgaata ttcacatgat atgaacagtg ggattaaagc tatggcattt cttcgaaatc
     1801 ctgacgaagg tttagcaaat aagtatctgg aagttaccga acagtatatg gagatgtatc
     1861 aaagtatgct gggtgattat ccttattcaa aatttgcttt ggttgagaac ttctgggaaa
     1921 caggttatgg aatgccttct tttacacttt taggcgaaaa agttatcagg tttccattta
     1981 tcctacactc atcatatcca catgaattat tgcataattg gtggggaaat agtgtttata
     2041 ttgattttaa gtctgggaat tggtgcgaag ggatcacagc ttacatggca gatcatttaa
     2101 taaaggaaca acgtggtgcc ggagatgaat atcgtcgttc cacattgcag aagtttagca
     2161 atttagtaga tgcagaaaat gattttcctt taagcgaatt tacttcgaga tatgatggcc
     2221 ccagtgaagc aattggatat ggtaaaagtt tgatgatgtg gcaaatgctt c
//
LOCUS       DASCQP010000127         2844 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000554923, whole genome shotgun sequence.
ACCESSION   DASCQP010000127 DASCQP010000000
VERSION     DASCQP010000127.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2844)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2844)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2844
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000554923"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(111..1916)
                     /gene="mutL"
                     /locus_tag="QF480_02160"
     CDS             complement(111..1916)
                     /gene="mutL"
                     /locus_tag="QF480_02160"
                     /inference="COORDINATES: protein motif:HMM:TIGR00585.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HJN05395.1"
                     /translation="MSDIIKLLPDSVANQIAAGEVIQRPASAAKELLENAVDSGAKQI
                     TLAIKDAGKTLIQVSDDGSGMSEMDARMSFERHATSKISKADDLFAIKTMGFRGEALA
                     SIAAIAQVELKSKPKGDEIGTCIVIEGSKVISQEPCQCPEGTTISVKNLFYNVPARRN
                     FLKSNNVEIRHIIEEFIRISTVNCNIGFSYYNNDKLVYKLLPGSMKSRIVALFGNVYN
                     ERLITVNQKTDSVEISGFIGKPEFAKKTRGEQYFFVNSRFIKHPYLHHAVNNAYTELI
                     PIDSYPSYFINIEIDPKNIDINIHPTKTEVNFQDARYIYAILHAAVKQSIGKHSLTPV
                     LDFDVIPDIETAFQSKPSSDLKQPSIKVNPDFNPFKKQSVENWESLYNDQSEKSSPSR
                     ENKDILSNAKITESEFESNKFLQIHSRFITCNVASGMMVIDQHLAHERIIYEEILDKL
                     KGSSQPSQQQLFPQNIHLTPSDAEIVKSLLPKLAKIGFVLEELGPVDFVVVGIPADAQ
                     ENDVNPIIEKIIENHKANVGDLNYDKNINLARSIATNQAIKHGTKLDEVEMQKIFDSL
                     FMCKVPRVSPGGKKTLTIIDVTKLENLIISDKKDG"
     gene            complement(2020..2334)
                     /locus_tag="QF480_02165"
     CDS             complement(2020..2334)
                     /locus_tag="QF480_02165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005873824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05396.1"
                     /translation="MRIISFRKPKPKSFKYKPRYYDQQKEELEKRKAAMGIDNELTHD
                     ESLRLRMDKRWRAGSADEERSILTRIVTYLIYGIFIGGSIYIIMFTDIVEQILHAFGV
                     TK"
     gene            complement(2475..>2844)
                     /locus_tag="QF480_02170"
     CDS             complement(2475..>2844)
                     /locus_tag="QF480_02170"
                     /inference="COORDINATES: protein motif:HMM:NF012398.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HJN05397.1"
                     /translation="DSCFEPTVILDPSQNAKVSTLEIFGPVVCIYTYKNREEAIKLAN
                     ALPTAFQASVFTHNIDIAFETVKKLNASAVMVNDHTAFRVDWMPFGGRDASGIGIGGI
                     PYSINEMTREKLIVIKSNSL"
BASE COUNT          817 a          511 c          472 g         1044 t
ORIGIN      
        1 cgttaattat taacaggttt tttacaacca ttggtaacat tgaaaagcct tgcggtcgat
       61 attgttgcat tattaattta tgatttatta aattttgatt ccttatataa ttaaccgtct
      121 ttcttgtcag atattataag attttccagc ttagtaacgt cgataattgt taaagttttt
      181 ttcccacctg gagatactct tggtactttg cacataaata aactgtcaaa aatcttttgc
      241 atttctactt cgtcaagttt cgtgccatgt tttattgcct gattggttgc aattgagcgg
      301 gctaaattaa tgtttttgtc ataattcaga tcacccacat ttgctttatg gttttcaatt
      361 attttttcta ttatggggtt tacatcgttt tcttgtgcat cggccggaat accaactaca
      421 acaaaatcaa cagggcccag ttcttctaat acaaaaccta ttttggccag tttaggtaaa
      481 agcgatttta caatttcagc atcactcggt gtgagatgga tattttgtgg gaacagttgt
      541 tgttgtgaag gttgtgaact cccttttaac ttatccaata tttcttcata aattattctc
      601 tcgtgcgcta agtgctgatc gatcaccatc atacctgaag caacattgca agtaatgaac
      661 cgagaatgta tttgcaggaa tttgttactt tcaaattctg attcagttat tttagcgtta
      721 ctaaggatat ccttgttctc ccttgatggt gaagattttt cgctttgatc attataaagg
      781 gattcccaat tctctacact ttgtttttta aaaggattaa aatcaggatt aacttttatt
      841 gatggttgct ttagatcgga tgaaggtttt gattggaatg cagtttctat atcggggatt
      901 acatcaaaat ccaaaacagg agtaagagag tgttttccaa ttgattgctt cacagctgca
      961 tgtagaatgg cataaatata gcgtgcatcc tgaaaattaa cttctgtttt ggttgggtgg
     1021 atattaatat caatattctt aggatctatt tcaatattaa taaaatatga aggataagaa
     1081 tcaatgggta ttagttctgt gtatgcatta tttacggcat ggtgaagata tggatgtttt
     1141 ataaatctgc tattcacaaa aaaatattgt tcacctctgg ttttcttcgc gaattcaggt
     1201 ttaccaataa atccggaaat ttcaaccgag tcagtttttt gatttactgt tatcagtctt
     1261 tcattatata cattgccaaa aagagctact attcttgatt tcatacttcc tggaagaagc
     1321 ttatagacca gtttgtcatt gttgtaataa ctaaaaccaa tattgcaatt tacggttgaa
     1381 attcttatga actcttcaat aatatgccta atttcaacgt tgttcgactt taaaaagttg
     1441 cgtcgtgccg ggacattata gaaaagattt tttactgata tcgttgttcc ttcagggcat
     1501 tgacatggtt cctgactaat aactttcgat ccctcaataa ctatacatgt tccaatttcg
     1561 tcacctttag gttttgactt tagttcaact tgtgcaatag ccgctataga tgctagtgct
     1621 tcacccctga atcccatagt tttaattgcg aacagatcgt ctgccttact tatttttgaa
     1681 gtagcatgac gttcaaaact catcctagca tccatttctg acatgccact gccatcatca
     1741 ctaacctgta ttagcgtttt accggcatct tttattgcta acgtaatttg tttagctccc
     1801 gaatcaacag cattttccaa caactctttt gccgccgaag ccggtcgttg gatcacctca
     1861 cctgcagcaa tctggtttgc tactgaatca ggaagtaatt ttataatatc tgacatgaaa
     1921 gggtaatctg ttttttaatt attaatgcct aaatgactga atgcttaaat gtgtgaatga
     1981 ttaaattaat ttgtagttta tttaagcatt tcatcatttc tacttagtaa caccaaatgc
     2041 gtgtagtatt tgttcaacaa tatctgtaaa cattataata taaatgcttc ctccaataaa
     2101 tattccgtat atgagataag ttactatcct tgttagaatc gatcgttctt catcagcact
     2161 cccggctctc caacgtttat ccattcgcaa tctcaacgat tcatcatggg tgagttcatt
     2221 atcaattccc attgctgctt tgcgtttttc caattcctcc ttttgctgat catagtagcg
     2281 aggtttgtat ttaaacgact taggttttgg ttttctgaaa gaaattatgc gcatgatgta
     2341 tatcttaagt tatatgcaaa attaggtcat tttggaaaat tttaccaaat aatcgtaata
     2401 ttgtgctgtt aaaattactt aacaggatta ttccaatcca catgagtctt gataaatagt
     2461 tgtaataatg ttcgttacaa gctattgctt tttatgacta tcaacttttc tcttgtcatt
     2521 tcattaatag agtaggggat accaccaatg ccaattcccg atgcatctct tcccccaaaa
     2581 ggcatccagt cgactctaaa tgctgtatga tcgtttacca tcacagctga tgcattaagc
     2641 tttttcacag tctcaaaggc aatatcaata ttatgtgtaa acacggaagc ttgaaacgca
     2701 gttggtaatg cattagctag tttaatagct tcttctctgt ttttgtaggt atatatacac
     2761 acaaccggac caaagatttc caaagtagat acttttgcgt tttgagatgg gtcaagtatt
     2821 acagtaggtt caaaacaact atcc
//
LOCUS       DASCQP010000128         1637 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000557016, whole genome shotgun sequence.
ACCESSION   DASCQP010000128 DASCQP010000000
VERSION     DASCQP010000128.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1637)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1637)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1637
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000557016"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1382)
                     /locus_tag="QF480_02175"
     CDS             complement(<1..1382)
                     /locus_tag="QF480_02175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006797702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HJN05398.1"
                     /translation="MSNIKEINRRRTFAIISHPDAGKTTLTEKLLLFGGAIQVAGAVK
                     SNKIKKTATSDWMEIERQRGISVATSVMGFEYKGIKINILDTPGHQDFQEDTFRTLTA
                     ADSVVVVIDVAKGVEPQTEKLVKVCRMRNIPIIVFINKMDRPGKDAFDLLDEIEQKLH
                     IKVTPLSWPINMGPGFKGVYNIFSKSLNLFSPGKQIIEEGVSINDISDSDVDEYLDED
                     ADKLREDVELIEGVYPKFVAIDYLDGNISPVFFGSALNNFGVKELLDNFIEIAPPPIG
                     RESDERLVLPEENQFSGFVFKIHANMDPNHRDRIAFVRIVSGTFKRNTYYQHVRLNRK
                     LKFSSPTAFMAQKKSIVDEMYPGDIVGLHDTGNFKIGDTITEVENLNFKGMPSFSPEL
                     FKYVENANPMKAKQLAKGIDQLMDEGVAQLFTGKHTGRKIIGTVGALQFEVIQYRLEH
                     EYGAKCRYEN"
     gene            complement(1483..1632)
                     /locus_tag="QF480_02180"
     CDS             complement(1483..1632)
                     /locus_tag="QF480_02180"
                     /inference="COORDINATES: protein motif:HMM:NF012422.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /protein_id="HJN05399.1"
                     /translation="MADKLFLSVHTVMTHRKKITRKLGIKSLSGLTVYALMNNLVDIR
                     EVERS"
BASE COUNT          495 a          325 c          260 g          557 t
ORIGIN      
        1 atattttcgt atctgcactt tgctccatat tcatgttcta atcgatattg aattacttca
       61 aattgcaaag cacctacggt tccaataatt ttccttccag tatgttttcc ggtaaacaac
      121 tgagcaacac cttcgtccat aagttggtcg attcctttgg caagttgttt tgctttcatt
      181 ggattagcat tttcaacata tttaaaaagc tcaggcgaaa aactgggcat acctttaaaa
      241 tttaaatttt cgacttcggt aatagtatca cctattttaa aattaccggt atcgtgcagt
      301 ccaacaatat ctccagggta catttcatcc acaatagatt ttttttgagc cataaatgcc
      361 gtaggactag agaatttcag tttcctgttt aatcgaacat gctgataata agtatttctt
      421 ttaaaagttc cggaaacaat tctgacaaaa gcaatacggt cccggtgatt aggatccata
      481 ttagcatgta tcttaaaaac aaaaccactg aattgattct cttcaggcaa aactaatctt
      541 tcatcacttt ctcttccaat tggaggagga gctatttcaa taaaattgtc aagaagttct
      601 ttaacaccaa aattgttaag ggcactgcca aaaaataccg gtgaaatatt gccatcaaga
      661 taatcaattg caacaaattt aggatacaca ccttcaataa gttcaacatc ttctcttagt
      721 ttgtcagcgt cttcgtcaag atattcatca acatctgagt cagatatgtc gttaatagaa
      781 acaccttcct caataatctg tttgccgggc gagaatagat taagtgactt tgaaaatata
      841 ttataaacgc ctttaaagcc aggccccata ttaattggcc aactcaaagg ggtaacttta
      901 atatgtaatt tttgttcaat ctcatccaat agatcaaacg catcttttcc gggcctatcc
      961 attttattga tgaaaacaat tatcggaata tttctcatcc tacaaacttt tacaagtttt
     1021 tcagtttgag gctctacacc ttttgctaca tcaattacaa caacaacgct atcggctgct
     1081 gttaatgtcc tgaaagtatc ttcctggaaa tcctggtggc ctggagtatc taagatgttt
     1141 attttgatgc ccttgtactc aaaacccatt acagaagtag ctacagaaat acctctttgc
     1201 cgttcaattt ccatccagtc ggatgtagca gtttttttta tcttatttga ttttaccgca
     1261 ccagctactt gaattgcacc tccaaaaagt agtaactttt ctgttaaggt agtcttcccc
     1321 gcatcaggat gactgataat ggcaaaagtt cgacgcctgt ttatttcttt aatgttactc
     1381 attcaaggtt aaaaattgag gtgcaaaagt agaaaaattg ttgtttgtta caattgtggg
     1441 aattttgcca taatggtttt tgaattattc ttgttgatag gtctaactcc tctctacttc
     1501 gcgaatgtca acaaggttat tcatcagtgc ataaactgtt aaccccgaaa gagatttgat
     1561 gccaagcttt ctggtgattt ttttcctatg agtcattact gtatgcacac ttaaaaaaag
     1621 tttgtcggca atctcct
//
LOCUS       DASCQP010000129         2607 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000559102, whole genome shotgun sequence.
ACCESSION   DASCQP010000129 DASCQP010000000
VERSION     DASCQP010000129.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2607)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2607)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2607
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000559102"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..237)
                     /locus_tag="QF480_02185"
     CDS             complement(<1..237)
                     /locus_tag="QF480_02185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019245122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HJN05400.1"
                     /translation="MSNGKDIFEGGRKLPVMEEFYTLQGEGYNMGKAAYFVRIGGCDV
                     GCSWCDSKESWNVELFPPADVDVVVNNVRNVPAST"
     gene            complement(238..1503)
                     /locus_tag="QF480_02190"
     CDS             complement(238..1503)
                     /locus_tag="QF480_02190"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN05401.1"
                     /translation="MIKLQNNVFVIVALLLLFVLDSSAQVEGCTDPNANNYNPEATNN
                     DGSCTYNLTIYNPPLRYLLPDEIKESSGLAFTNGKLWTINDSDGLPVLYAFDTISGQI
                     DQRITITDAINIDWEALADDDQFIYIGDFGNNSGTRDDLTIYRVLKSDIPSVGDAAIE
                     STKLTFTYSDYSGPVENRKSNNFDCEAFIADSEFLYLFSKNYGDQQTKLYKLPKVPGD
                     YVAELVTTFNSSGLITGADINNSSQEITLIGYVNQTWIPFTWLLFDYEDNNFFSGNKR
                     RIDFINIPATQTEAIVYTVGKHEVISSEGHILFSQSAYSFNSALWTDSSPSGISETST
                     KKFDFLLSPNPVRRNKLTVKISNLPIGEYQLEIYDTLGKLMRISNYDMTRKGGTSKIN
                     IKVVDFTPGTYFVRMRSGNQVVEKKFIKN"
     gene            complement(1540..2436)
                     /gene="folD"
                     /locus_tag="QF480_02195"
     CDS             complement(1540..2436)
                     /gene="folD"
                     /locus_tag="QF480_02195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008154925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004488 - methylenetetrahydrofolate
                     dehydrogenase (NADP+) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HJN05402.1"
                     /translation="MKEENFAQIIDGKLIASKVRDEIKVEVAALIDADKDTPHLVAII
                     VGDDPASQTYVASKEKAAKNVGITSSVYKYPSDIKEEELLNTIDFLNNDDDVDGFIVQ
                     LPLPDHINVDTVIDRIDPKKDVDGFHPVNVGKMVLGQPSYISATPAGVIELFKRYKIE
                     TEGKHCVVLGRSNIVGSPMSILMSRKTNPGNSTVTICHSKTKDMKSITMQADILICAI
                     GVPNFVKADMVKDGAVVIDVGMHRIPADNEKGYKITGDVDFEEVKNKASFITPVPGGV
                     GPMTIAMLLKNTLLAFKEEYTS"
BASE COUNT          825 a          532 c          377 g          873 t
ORIGIN      
        1 tgttgaagca ggaacatttc ttacattatt aacaaccaca tcaacatctg ctggaggaaa
       61 aagttcaaca ttccaagact cttttgagtc acaccaagag caaccaacat cacatcctcc
      121 aatacgaaca aagtaagctg ccttacccat gttatagcct tcaccctgca aagtgtaaaa
      181 ctcttccatt acaggaagtt ttctcccccc ctcaaaaata tcttttccgt ttgacattta
      241 atttttaata aacttttttt cgactacctg attaccagaa cgcatcctga caaaataagt
      301 gcctggcgta aaatcaacta cctttatatt aatcttagac gttccacctt ttctcgtcat
      361 atcataatta cttattctca taagttttcc taaagtgtca taaatttcaa gttgatattc
      421 gccaataggc agattactaa tcttgacagt aagtttattt cttcttaccg gattcggact
      481 taacaaaaaa tcaaatttct tagttgatgt ttcagaaatc ccagagggtg aactatcagt
      541 ccacaaagcc gaattaaaac tataagctga ttgcgaaaac agaatatgtc cttctgagga
      601 tattacttca tgtttaccaa cagtgtaaac aattgcttct gtttgtgtag caggaatgtt
      661 tataaaatca attcttcttt tgttccctga aaagaaatta ttgtcctcat aatcaaatag
      721 caaccaagta aatggtatcc aagtttgatt aacatatcct atcaaagtaa tttcctgact
      781 gctgttatta atatctgctc cggtaataag tcctgatgag ttaaatgttg ttactaactc
      841 agcaacatag tcacccggaa cctttggtag cttgtaaagt ttggtttgct gatctccata
      901 attttttgaa aacagatata aaaactcaga atctgcaata aaggcctcac agtcaaagtt
      961 attgctcttt ctgttttcaa caggtcctga ataatctgag tatgtaaaag tcaattttgt
     1021 gctttcaata gcagcatctc ctactgaagg gatgtctgac tttagcacac ggtaaattgt
     1081 aagatcatcg cgtgttccgg aattgttacc aaaatcacca atatatatga actgatcatc
     1141 gtcagcaagt gcttcccaat caatatttat cgcatcagta attgtaattc tctgatcaat
     1201 ctgaccacta attgtatcaa aagcataaag tactggtaat ccatcactat cgtttattgt
     1261 ccataacttt ccattggtaa atgccaatcc tgaggattcc tttatctcat ctggcaataa
     1321 atatcttaac ggcggattat aaattgttag attatatgtg cacgacccat cgttattagt
     1381 tgcctcagga ttatagttat tcgcatttgg atcagtacat ccttctacct gagctgaaga
     1441 atccaataca aatagcaata gtaaagcaac tattacaaaa acattgttct gcagtttaat
     1501 catataaata attttaaaac agtatcaata gcggtttgcc taagacgtat attcttcttt
     1561 aaacgctaat aaagtatttt taagaagcat cgcaatagtc attggaccaa cgcctcctgg
     1621 taccggagtt ataaaagagg ctttattttt cacttcctca aaatcaacat caccagtaat
     1681 tttataacct ttttcgttat ctgcaggaat acggtgcatt ccaacatcga taactacggc
     1741 accatcctta accatatctg ctttaacaaa atttggtaca ccgatggcac aaattaatat
     1801 atcggcttgc atagtaattg atttcatatc ttttgtctta ctatggcaaa tagttacggt
     1861 tgaattaccg ggatttgttt ttctcgacat caaaatactc atcggagatc ccacaatatt
     1921 agaccgaccc agaactacac aatgctttcc ttcagtttct attttgtatc gtttgaataa
     1981 ttcaataacc cctgcaggag ttgcagatat ataagaaggt tgacctagaa ccattttacc
     2041 aacatttaca ggatgaaaac catcaacatc ctttttggga tctatacgat caataactgt
     2101 atctacattg atatgatcag gcaatggcag ttgaactata aatccgtcaa catcatcatc
     2161 attattaaga aaatctattg tgttaagaag ctcttcttct tttatatctg agggatattt
     2221 ataaacagat gatgttatac ctacattctt ggcagccttt tctttgctgg caacataagt
     2281 ttggctggca ggatcatcac ctactataat agctaccaaa tgaggtgtat ccttgtcagc
     2341 atcaattaat gcagcaactt caacttttat ctcatcccta acttttgaag caataagttt
     2401 accatcaatt atttgtgcga aattttcttc tttcattttg gttaaaaata aaatatttgc
     2461 aatgtataaa gactccgaaa ttatcgtttc atctggttca tcatattagc catctttcta
     2521 ccaccgcctg atgtcatcat cttcatcatt ttgctggttt cactaaactg cttaatcaat
     2581 cgatttactt cctgaatatc tgttcca
//
LOCUS       DASCQP010000130         5355 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000559640, whole genome shotgun sequence.
ACCESSION   DASCQP010000130 DASCQP010000000
VERSION     DASCQP010000130.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 5355)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5355)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5355
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000559640"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..537)
                     /locus_tag="QF480_02200"
     CDS             complement(<1..537)
                     /locus_tag="QF480_02200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HJN05403.1"
                     /translation="MVEIKEVVSKKDKKEFVDFQFDLYKGNDKWIPPLKKDEIKQLSP
                     QTNLAFDFCDAKFWTAWKEGKCVGRIGAIINKDYNNKIGKQMGRFTRFEVINDQDVAK
                     KLFDTIETWLKQQGMTAIHGPLGFTNLDNQGLLIEGFDHLPSIASVMHFPFMQKLIED
                     EGFVKENDWVEFRLKIEEV"
     gene            661..1614
                     /locus_tag="QF480_02205"
     CDS             661..1614
                     /locus_tag="QF480_02205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004329691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HJN05404.1"
                     /translation="MERILIIGCSGQIGSELVLELRNIYGNSNVFATDIKDPPNEVRD
                     SGPFQILDVLDYKNLLHFVVRHKITQVYNLAAVLSGNAEKIPVQAWDINMKALMNTLQ
                     VAQQSDAKKLFWPSSIAVFGPTTPRYDTPQLTVMEPNTVYGISKLAGERWGEYFFNRF
                     GVDFRSVRYPGLISYKTEPGGGTTDYAVEIFFEAIRNSRYECFLSEDTALPMMFMDDA
                     IKNTIKLMEADGDKLSLRSSYNMAGISFTPKQVANEIKKHIHDFSIVYKPDFRHAIAN
                     SWPVSIDDSIARKDWGLKDEFDIEKLSSLMLSKITERINGK"
     gene            1657..3099
                     /locus_tag="QF480_02210"
     CDS             1657..3099
                     /locus_tag="QF480_02210"
                     /inference="COORDINATES: protein motif:HMM:NF024816.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HJN05405.1"
                     /translation="MKKIKIYIRTFYLLLIVLFASLSIAQGTIDSLKTELQNANNPDT
                     EIEILINIGSDYTDNNLDSAYAYLMKAKRKLEENPHPFLKGKFYQALGLYSLRAKKFN
                     EAIVQFKSSIGLYTEVDSLSLIPIVNNMIGNCFDDILLYDSAIHYFQLSIHMIDSANN
                     SVLLAYYYNNMASVYLGMNNKEKALKYYINAATIFKEQQKFQKAAVAINNIGLISKGL
                     KNYVIAKKYFEEAIELNKKSDNIYHLCINYNNLGLTLSGLDEYEKGIYYLKEAIKLSQ
                     EADFIGLVAQSNHNLGALYKENEKYHLALLYTEKSLTTSREIGITYGEMINLTNIGEI
                     HLGLQQYDSAVVYLLAALELAIELNDLEVSYEIYENLANTYEGLGMYKEAYENYRSYE
                     TLKDSSYILKKARELNELQTKYDTEQKELENQLLKDQNEIHELTILRQKIIMIAVLLI
                     VILSVVILIILFISRAKRKKQLILLRTKIS"
     gene            3174..3821
                     /locus_tag="QF480_02215"
     CDS             3174..3821
                     /locus_tag="QF480_02215"
                     /inference="COORDINATES: protein motif:HMM:NF014567.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HJN05406.1"
                     /translation="MRGPFNSLIRFSSLLNDEIKDDNYKNVPLYTKQLLNTSNKAFEL
                     VENLLNWSRTQIDQIVVHPSSILLINIVNDTLDIMLPKVDDKQITITVNIDSKIKVFT
                     DPDVLTVILRNLLSNAIKFTFKGGKIEIGTIEEKDYCVVFVKDNGKGIGHESIDSIFT
                     KNKGYTSSGTENETGSGLGLYIAADFIKKLGGKIWVESELEKGSTFSFSIPKKQG"
     gene            complement(3827..4774)
                     /locus_tag="QF480_02220"
     CDS             complement(3827..4774)
                     /locus_tag="QF480_02220"
                     /inference="COORDINATES: protein motif:HMM:TIGR00147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HJN05407.1"
                     /translation="MKGESNNRWYIIVNPEAGSKKTQADWPGIKKLLEAHDFDMECVT
                     TKYQNHATELAKNAIQDLGFSNIISVGGDGTLNEVINGVFLQDRLKPTDVTVGVISVG
                     TGNDWIRMYNIPQDYNEQIKVIKKNNTFLQDVGEVSYFHNDAEKVHYFINIAGMGFDA
                     FLAKKTNVAKQKGSGGAFTYLYNLVLGLFQFSYNYIEIDKEGENIFSGNVFSMSIGIC
                     KYHGAGIMQLPFAIPDDGLFDVTVIEKASRLTIVRNIKNLYDGSFVKMKEVKTYTGEQ
                     FTIRAIPQKSVFLETDGETLGHSPLFFKILPRAAKFIIK"
     gene            complement(4882..>5355)
                     /locus_tag="QF480_02225"
     CDS             complement(4882..>5355)
                     /locus_tag="QF480_02225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013064231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HJN05408.1"
                     /translation="NYVAIIEDYGDSIKTFREDKLLKEYKSLQMKNWRGSSWPPNVVH
                     KKTWDLVGGYSVEFTPGMYSDPDFSMKLWKAGIRIFYGVGKSKVYHFGEKTTSRVRKN
                     KGSDTFLLKWGLTARTYYSKYLQIGQEHINEYPDNVELNMFSKIRNKMKRMIKSF"
BASE COUNT         1860 a          880 c          897 g         1718 t
ORIGIN      
        1 aacctcttca attttaagcc taaattcaac ccaatcgttt tccttaacaa atccttcatc
       61 ctcaataagt ttttgcatga aaggaaaatg cattaccgag gcaatggagg gcagatgatc
      121 aaatccttca ataagcaaac cctggttgtc gaggttggta aagccaagcg ggccatgaat
      181 agcagtcata ccctgttgtt taagccaggt ttcaatagtg tcaaataact ttttagcaac
      241 gtcttgatca ttaataactt caaatcgggt aaaacgcccc atctgttttc caatcttgtt
      301 attataatct ttattgataa tagctcctat tctgccaaca cattttcctt ctttccaggc
      361 tgtccagaat tttgcatcac aaaaatcaaa tgccagattt gtttgtggac ttaattgttt
      421 gatctcatct tttttcaatg gaggtatcca tttatcattt cctttatata aatcaaactg
      481 aaaatcaaca aactctttct tgtctttttt tgatacaact tcttttattt caaccatata
      541 actagatgtt atccattata atgcaaatat aatacatcaa taactagaaa acagataata
      601 tggtgattat tgattgaaat agtttgataa atttgtagca ggaataacat ttcataaaat
      661 atggaaagaa ttttaattat aggatgttca ggacaaatcg gctctgagct ggtactcgaa
      721 ttaaggaata tttatggaaa cagtaatgta tttgcaactg acataaaaga cccacctaat
      781 gaggttcgtg attcaggtcc atttcaaata ttggatgtgt tggattataa aaatctgttg
      841 cattttgttg tccgccataa aataactcaa gtttataatc tggctgcagt tctttccgga
      901 aatgctgaaa aaataccagt tcaggcatgg gacattaata tgaaagcact aatgaatacc
      961 ctgcaggtag ctcaacaatc tgatgctaaa aaattattct ggcccagttc aattgcagtc
     1021 ttcggaccca caacaccacg gtatgatact cctcaactta cagttatgga gccaaatact
     1081 gtttatggca tatcgaagct tgcaggagaa aggtggggag agtatttttt taacagattt
     1141 ggagttgatt ttagaagcgt tagatatcca ggattgatca gctacaaaac tgaacctggt
     1201 ggtggaacaa ctgattatgc tgttgaaata ttctttgagg ctattagaaa ttccagatac
     1261 gaatgtttcc tttcggagga cacagcatta ccaatgatgt ttatggatga tgccattaaa
     1321 aatactatca aactgatgga agctgatggt gataagctaa gtttaagatc aagctacaat
     1381 atggcaggta tttcctttac tccaaagcaa gtagcaaatg aaattaagaa acatatacac
     1441 gatttttcta ttgtttataa acctgatttc aggcacgcta tagctaacag ctggcctgta
     1501 agcatagacg acagtatagc tcgtaaagac tgggggctaa aagatgaatt tgatattgaa
     1561 aaattgtctt cactaatgtt gagcaagatt actgaaagga taaacgggaa atagtgggaa
     1621 tcaatagtaa ggacactaag ttataatata tagtatttga agaaaattaa aatatatatc
     1681 agaacattct atctgcttct aattgtacta tttgctagtt taagcattgc tcaaggcaca
     1741 atcgacagcc tcaaaactga gcttcaaaat gctaataatc ctgatacaga aattgagatc
     1801 ttaattaata ttggatctga ttatacggat aataatttgg attcagcgta tgcttattta
     1861 atgaaagcca aaagaaaact agaagaaaat ccacaccctt ttctaaaagg taaattttac
     1921 caggcacttg gattatattc attgagagct aaaaaattca atgaagcaat agttcaattt
     1981 aaaagcagta ttggcttgta taccgaagtt gatagtttat cactaatccc tattgtaaat
     2041 aatatgattg gaaattgttt tgatgatatc ttattgtacg attcagcaat acattacttt
     2101 caactttcga ttcatatgat tgacagtgct aataattcag ttctgttagc ttactattac
     2161 aataatatgg caagtgttta cttaggcatg aacaacaaag agaaagcgct taagtattat
     2221 ataaatgcgg cgacaatatt caaagagcag caaaaatttc agaaagctgc agtagcaatc
     2281 aataatattg gactaattag caagggtctt aaaaattatg tgatagctaa aaagtatttt
     2341 gaagaggcta ttgagttaaa caaaaaaagt gataacattt atcatttgtg tataaactat
     2401 aataaccttg gtcttacatt aagtgggctt gatgaatatg aaaaagggat atattattta
     2461 aaagaagcta tcaaattatc acaggaagct gactttattg gtcttgtggc tcagtcaaac
     2521 cataaccttg gagcgttata taaggaaaat gaaaaatatc atttggcttt attatatact
     2581 gaaaaatcac ttacgactag tagagagatt ggtataactt acggtgaaat gattaatctt
     2641 accaatattg gagagataca tttaggttta caacaatatg attctgcagt ggtatattta
     2701 ttggctgcac tagaactggc aattgaactt aacgatctcg aggtttcata tgagatatat
     2761 gagaatcttg ccaacactta tgaaggattg ggaatgtata aggaagctta tgaaaattac
     2821 agatcatacg aaacgttaaa ggatagttcg tacattttaa aaaaagcgag ggagttaaat
     2881 gagcttcaaa caaagtatga tactgaacag aaagaacttg aaaatcaatt gttaaaagat
     2941 cagaatgaaa tccatgagct aacaattctc cgacaaaaaa ttattatgat tgcagtatta
     3001 ttgatcgtaa tactttcggt agttatactt attatcttat tcattagcag agccaaaaga
     3061 aagaagcaac ttattttact gaggacaaaa ataagctgat tgaagaaaaa tctcttcagt
     3121 taaaagaatc aaatgagaca aaagaccaac ttttttcaat tgtatctcat gacttgaggg
     3181 gaccatttaa ttcgttgatc agattctcat ctttactaaa tgatgaaata aaagatgaca
     3241 attataaaaa tgtaccacta tatacgaagc aattactaaa tacttcaaat aaagcatttg
     3301 aacttgttga aaatttactt aattggtcga ggacgcaaat agaccaaatt gttgtacacc
     3361 ccagctcaat tttacttatc aatattgtga atgatacatt agatataatg ttgccaaaag
     3421 ttgatgataa acaaattacg ataaccgtaa atatagattc caagataaaa gtttttactg
     3481 atccggatgt gctaacggtt atattgagaa atttattaag taatgccatt aagtttacgt
     3541 ttaaaggagg aaaaattgag ataggcacaa ttgaagagaa agattattgt gttgtttttg
     3601 taaaagataa tggcaaggga ataggccatg aaagtataga ttcaatattt acaaaaaata
     3661 aaggttatac atcttccgga acggaaaatg aaacgggctc tggattaggc ttgtatattg
     3721 cagcagattt tattaaaaag cttggtggta aaatttgggt tgaaagtgag ctggagaagg
     3781 gtagtacctt tagcttttct attccaaaaa agcaaggata ggatttctac tttattataa
     3841 actttgcagc gcgaggcaaa attttaaaaa ataagggcga atgaccaagc gtttcaccat
     3901 ccgtttcaag aaatacagat ttttgaggaa tagcccttat cgtaaattgt tctccggtat
     3961 aagttttgac ctctttcatt tttacaaatg atccatcata taggttctta atatttctga
     4021 caattgttaa cctggaggct ttttctataa ctgtaacatc aaaaaggcca tcatcaggta
     4081 tggcaaatgg aagttgcata atgccagcac catgatattt acaaatacct atactcatac
     4141 tgaatacatt gccagaaaaa atattttcac cctctttgtc aatttcaata taattgtaac
     4201 taaactgaaa caatcccaga accaaattat acaaataggt aaaagcacct ccggaaccct
     4261 tttgttttgc cacattggtt ttttttgcaa ggaaggcatc aaatcccatt cctgcaatat
     4321 ttataaaata atgtactttt tctgcatcat tgtgaaaata tgaaacctca ccaacatcct
     4381 gcaagaatgt attatttttc ttgattacct taatttgctc attataatcc tggggtatat
     4441 tatacatcct aatccagtcg ttacctgttc ctacagaaat aacaccaaca gtaacatcag
     4501 tcggttttaa tctgtcttgc aggaagacac catttatcac ttcattaagt gtaccatcac
     4561 ctccaacaga aattatattg gagaacccta agtcctgaat tgcatttttc gcaagctcgg
     4621 ttgcatggtt ttgatattta gtagtaacac attccatatc aaaatcatga gcctcaagca
     4681 gtttttttat accgggccag tcggcctgcg tttttttact acccgcctct ggattaacaa
     4741 taatatacca ccggttattt gattctcctt tcaattgtaa attcagttat agtaaaaagt
     4801 ttaaaagtaa gaaaaagatt gagagtgatc ctgaggttaa ggttgagtgt attaaataag
     4861 ctatcattct gaacagtgaa cctaaaaaga ctttatcatc ctcttcatct tgtttcttat
     4921 cttcgagaac atgttaagtt caacattatc aggatactca ttaatatgtt cctggccaat
     4981 ttgcaaatat ttagaataat atgttcgggc tgttaatccc cacttgagta aaaaagtatc
     5041 actccctttg ttttttctaa ctctgctggt agtcttctct ccaaaatgat agactttgct
     5101 ttttccaaca ccgtaaaata ttcttattcc ggctttccat aacttcatcg aaaaatctgg
     5161 atcggaatac attccaggtg taaattctac actatatcct ccaactaaat cccaagtctt
     5221 cttatgtaca acgtttggag gccatgaact gccacgccaa ttcttcattt gcagactctt
     5281 atactccttc agaagcttat cttctctaaa ggttttaatc gaatcaccat aatcttcaat
     5341 tattgcaaca tagtt
//
LOCUS       DASCQP010000131         3051 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000561470, whole genome shotgun sequence.
ACCESSION   DASCQP010000131 DASCQP010000000
VERSION     DASCQP010000131.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3051)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3051)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3051
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000561470"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            318..1730
                     /locus_tag="QF480_02230"
     CDS             318..1730
                     /locus_tag="QF480_02230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05409.1"
                     /translation="MLNQKTDVYPVISNPNDGFPMLFISGKEIRVFYLTDECKFQKEI
                     LLRKPTKNSKRYLGSYIVDSNLIITFSNKKLTFVSQLIVNLRTDDYYERTNNLISENQ
                     KYLTSWEKDENLIVLGIVENTNKLIVSTFNGYGDASVNEYDFDDLYIDRIITNSSLYH
                     LFNINEGKLQKIDYTIPVSLGITSARNKSYLINDEIIITIDLFDNVTYYLNINLSDNT
                     YKIHSYNCNLSDSSNSASTKHNSFIYDNTIFQLSINKFEVGLKVQSLSDTNRVSSYHS
                     SNVRNIDFTNSSMILRNEKEGFLYGNPEERNIKKARKFLRIISRMKPAISVFRKHTDF
                     QILMGGVVETQQAKGVISEAIMVSGGEMIVGPGGNLIMPDPIYNFPSNYSFSSYSSRK
                     AAYFSSVINATTYTHNYKSISKYTYDYIFDYANYMPGRFGLVTIFKLKGDYYLGYYSY
                     SSHTYNIEWFKNIDDHVIRF"
     gene            complement(1783..2298)
                     /locus_tag="QF480_02235"
     CDS             complement(1783..2298)
                     /locus_tag="QF480_02235"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF024675.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016790 - thiolester hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HJN05410.1"
                     /translation="MYPYLRTLKFFARRKSKLAIGDESVVNMRVLFSDVDPFMELNNG
                     RHLTMMDFGRFDLAIRTGLLSVAKQKNWSFTIAGASVRYRHRLKFMQKYTLHSQVVGY
                     DEKWFYFHQKTIRHGKIHSAALIRAAVTSNKGIVNPMEVLRAMGYDDLSYSVPDWVAA
                     WAKADDLRPWD"
     gene            complement(2302..2952)
                     /gene="rpe"
                     /locus_tag="QF480_02240"
     CDS             complement(2302..2952)
                     /gene="rpe"
                     /locus_tag="QF480_02240"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006283450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004750 - D-ribulose-phosphate 3-epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HJN05411.1"
                     /translation="MDHLVAPSMLSANFGQLKADVEMINNSDADWFHLDIMDGVFVPN
                     ISFGLPIVKTIKSNAKKPLDVHLMIVHPERYISDFKSAGADILTIHYEASTHLHRSIN
                     EIKEEGMKAGVVLNPHTSVNVLEDIISEVDLVLLMSVNPGFGGQKFIENTYIKISKLK
                     NLIIKTNSKSLIEIDGGVNLENASKLVNTGADVLVAGNTVFSSSDPISTIHKLKQA"
BASE COUNT         1008 a          480 c          496 g         1067 t
ORIGIN      
        1 cctaggtatc tcaagtatat cattgaaata ttgccatata agtgctggtt ttagctttag
       61 taatgccgta ttcatttatt tgtgaattat tttcaacaaa aatattaaaa atcgtaaaat
      121 gtgctatata taatattatt aaatgttatt atatgtgctg aataaacgtt ataatatcta
      181 ttgatcttag aattgtagtt tataactttt tatttttgcc tgtaattatg aaaataaaaa
      241 accaaatatt attagttatt ttagtaacat gcacagttac tggcttttct cagcttaccg
      301 ttcttaataa ttatttaatg cttaatcaaa aaactgatgt ttatccggta atatccaatc
      361 ccaatgatgg ttttccaatg ttattcattt ctggaaagga aatcagagtt ttctatttga
      421 cagatgaatg taaatttcaa aaagaaattc ttttgagaaa accaacaaag aactcaaaac
      481 ggtatttggg aagttacatt gtagatagca acctaattat tacattttct aataagaaac
      541 tcacatttgt ttctcagctc attgttaatt tgaggacgga tgattattac gaaagaacga
      601 ataatttaat aagcgaaaat cagaaatacc ttacatcttg ggagaaagat gaaaacctaa
      661 tagttctagg aatagtggaa aacactaata aattgattgt aagtactttt aatggatatg
      721 gtgatgcttc ggttaatgag tatgactttg atgatttgta catagacaga attattacca
      781 attcctcatt atatcatttg tttaatatta atgagggaaa acttcaaaag attgattata
      841 caattcctgt tagtcttggt attacctccg caagaaataa atcatattta attaatgatg
      901 agataataat tactattgac ctttttgata atgtgacata ttatttaaac attaatttgt
      961 ctgataatac ttacaaaata catagctata attgcaattt atcggattcg agtaattcgg
     1021 catcaaccaa acataattca tttatatacg ataatacaat ctttcaatta agtataaata
     1081 aatttgaggt aggcttaaag gtgcaaagcc taagtgacac aaacagagtt agttcctatc
     1141 attcttccaa tgtaagaaat atagatttta ccaattcgtc aatgatactg agaaacgaaa
     1201 aggaaggttt cttatatggt aacccggaag agaggaatat aaagaaagca aggaaattct
     1261 taagaattat atcaagaatg aaaccggcta tctcagtttt tagaaaacat acagattttc
     1321 aaatccttat gggaggtgtt gttgaaactc aacaagcaaa gggagtaata tctgaagcaa
     1381 ttatggtgtc aggtggtgaa atgattgtgg gtcctggagg taatctaatt atgcccgatc
     1441 caatttataa ttttccgtct aattatagtt tttcttcgta ttcctcccga aaagcggcat
     1501 atttttcgag tgttattaat gccactactt atactcacaa ttataaatca atatcaaaat
     1561 acacgtatga ttatatattt gattacgcaa actatatgcc tggtcgtttt ggattggtaa
     1621 ccatctttaa gttgaaaggc gattattacc tgggatatta ttcatatagt agccatacat
     1681 ataatattga gtggtttaaa aatattgatg atcatgtaat acggttctaa gttgagtaga
     1741 agggaagtga tcagaagcaa ttgtggtaat atttgtaagg ttttaatccc agggtcttaa
     1801 atcatcagct tttgcccatg ctgctaccca atccggaaca gaataactta aatcatcata
     1861 tcccatcgct cgcagtactt ccattggatt tacaatacct ttgttagatg taacagccgc
     1921 acgaatcaat gctgctgagt gaatctttcc atgccttata gttttttgat ggaagtaaaa
     1981 ccatttttca tcatatccta ctacttggga atgaagcgtg tatttttgca tgaatttgag
     2041 tctatgcctg taacgaacac ttgcacctgc tatagtaaaa ctccagtttt tttgttttgc
     2101 aactgacaat aggcccgttc tgatggctag atcaaatctt ccaaaatcca tcattgttaa
     2161 gtgacgtcca ttatttagtt ccataaaggg gtcaacatca ctaaatagta cgcgcatatt
     2221 tactacgctt tcgtctccta tagcaagttt actttttctt ctagcaaaga attttaacgt
     2281 gcgtaaatag gggtacatat attacgcttg tttgagttta tggatagtgg aaattggatc
     2341 ggatgaacta aatactgtat ttcctgcgac taatacatca gcacctgtat taacaagttt
     2401 ggatgcattt tcaagattaa ctccaccatc tatttctatt aaggatttac tgtttgtttt
     2461 tattattaag tttttaagtt tgcttatttt aatatatgta ttttcaataa acttttgacc
     2521 accaaatcca ggatttacag acataagtag gactaagtca acttcggata taatatcttc
     2581 aagtacatta acagacgtgt gtgggttaag cacaacccca gccttcattc cctcttcttt
     2641 tatttcattg atgctcctgt gtaaatgtgt acttgcctca taatgaatag ttaatatatc
     2701 ggcaccagca ctcttaaaat cacttatata tctttctgga tgtacaatca ttaaatgtac
     2761 atcgaggggc ttttttgcat tactcttgat tgtttttact atcggtagtc caaaacttat
     2821 attaggaaca aaaacaccat ccataatgtc taagtggaac caatcggcat cgctattgtt
     2881 tatcatctct acatcagcct tgagttggcc gaagtttgca gaaagcattg atggtgccac
     2941 tagatgatcc atagtttttt tgcaaatata aaaaaagcgt cagcctgagg cggacgcttt
     3001 gaatctttat ccgagataag attttaatat cttactcctt gaagtatgct t
//
LOCUS       DASCQP010000132         1714 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000561821, whole genome shotgun sequence.
ACCESSION   DASCQP010000132 DASCQP010000000
VERSION     DASCQP010000132.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1714)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1714)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1714
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000561821"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1140)
                     /locus_tag="QF480_02245"
     CDS             complement(<1..1140)
                     /locus_tag="QF480_02245"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HJN05412.1"
                     /translation="MDNHKKYSRYVIYLIIISTIIRGLLAFVLELGNDEVYYRLYALF
                     PDWSHFDHPLIVGLVIQLTTINLLFQSELFLRLGAVIIGAFNLWIIFKIGQQIKDSQT
                     GYYASLLYAASIYATIITGVFILPDSPQSLFWLWAIYLIINIIPKSPEEQKSGINIMK
                     IGIILGLGILSKYTTVFLWFGIAIYILAYNRSWLKSRWLYISILTTVIITLPIIIWNL
                     QNDFISLSFHSGRVDMGGYSINPGYFLTELGGEFLYNNPVNFILIILSVIAAIRGKLS
                     LNQKYTRLILLSGLPLIVTFLVFSVFRSILPHWTSPGYTSLIPLAAVYLSQHRSKEKR
                     GLPVAIVSALLLILVIIILSLSQINYGVFSIDKTKDYHRIGMNDPT"
     gene            complement(1145..>1714)
                     /locus_tag="QF480_02250"
     CDS             complement(1145..>1714)
                     /locus_tag="QF480_02250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05413.1"
                     /translation="QIAYIISNDDAHDVMNTNHVGRRFTMINSPTLNREIIVSNLKKG
                     AAYGMDFFRIGDEPFEDKIERSLHIPKLTSAILYTDTLVVKVNAKALQFRFIGNDGKV
                     LKIENNTNTSSYIIDGKDRYVRTEIIFPDSSIMYLNPIIRYSGEFPLTFKTAEVDSSA
                     TMKLRIVYFLIVLSIAYLISRFRMRKKRN"
BASE COUNT          579 a          287 c          286 g          562 t
ORIGIN      
        1 ggtaggatca ttcattccga tacgatgata atctttggtc ttatctattg aaaatactcc
       61 ataattaatt tgggataaac tcaaaataat tattacaaga attaacaaaa gtgctgaaac
      121 tatcgcaaca ggcaaaccgc gtttttcttt tgatcgatgt tgtgataaat aaaccgcagc
      181 caatggtatt aacgatgtat aacccggact tgtccagtga ggaagtatgc ttctgaaaac
      241 tgaaaacact aaaaaagtta caattaaggg taatcctgaa agtagaatta accttgtgta
      301 tttttggtta agcgaaagtt ttcccctaat tgcagcaatt acactcaaga ttattagtat
      361 aaaattaacc ggattgttgt ataggaattc accacctagt tcagtcaaga aataacctgg
      421 atttatcgaa taaccaccca tgtcaactct tccggaatga aaagataagc ttatgaagtc
      481 gttttgcaaa ttccatatta ttattggaag cgtaataata acggttgtta atatagagat
      541 gtataaccat cggcttttta accaactacg attgtaagct aatatataaa tagcaattcc
      601 gaaccaaaga aacactgttg tgtactttga taatatacct aatccaagaa taattccgat
      661 tttcataata ttgatacccg acttttgttc ttctggactt tttggaataa tattaattat
      721 cagataaatc gcccacaacc aaaacaggct ttgaggtgag tcgggcagga taaatacacc
      781 tgtaattatt gttgcataaa tggatgctgc gtataatagt gaagcataat atcctgtttg
      841 cgaatctttt atttgttgtc ctattttaaa tattatccaa aggttgaagg ccccgataat
      901 aactgcccca agccttaaaa ataactcact ttgaaatagt aagttaatag ttgtaagttg
      961 tataaccagt ccgacgatta atgggtggtc gaaatgcgac cagtcaggaa aaagtgcgta
     1021 tagtctgtaa tatacctcat cgttacctaa ttcgagtaca aacgcaagta atccacgtat
     1081 gattgtagat ataataatca ggtagattac ataacggcta tatttcttgt ggttatccat
     1141 atggttaatt gcgttttttt cgcattctaa atctggaaat caagtaagcg attgaaagta
     1201 caattaggaa atagacaatc cttaacttca tcgtagcaga actatcgact tcagctgttt
     1261 taaatgtaag aggaaattca ccactataac gtattatagg attcagatac attattgaac
     1321 tgtcaggaaa tataatttct gtacgtacat agcgatcctt gccatctata atatatgagg
     1381 aagtattagt gttattctca attttcaata ctttcccatc atttccaata aatctgaact
     1441 gcagggcttt agcattaact ttaacaacta gtgtatcggt ataaagtatt gctgatgtta
     1501 attttgggat atgtaaagag cgctctattt tgtcttcaaa tggttcatca cctattctga
     1561 aaaaatccat tccataagca gcaccttttt tcaaattact aacaataatc tctctgttta
     1621 aagtgggtga attaatcatt gtgaatcttc gtccaacatg gtttgtgttc ataacatcat
     1681 gagcatcatc attgctgata atatatgcaa tttg
//
LOCUS       DASCQP010000133         1524 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000561999, whole genome shotgun sequence.
ACCESSION   DASCQP010000133 DASCQP010000000
VERSION     DASCQP010000133.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1524)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1524)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1524
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000561999"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..588)
                     /locus_tag="QF480_02255"
     CDS             complement(<1..588)
                     /locus_tag="QF480_02255"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004327499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004731 - purine-nucleoside phosphorylase
                     activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HJN05414.1"
                     /translation="MLVKIKETSAYINKRISEVPYIGLILGSGIGDLAKEIEADIEIP
                     YKEIPNFPLSTVDGHQGQMIFGKLNGVQVVALQGRFHFYEGYSMQEITMPVRVMQNLG
                     IKYLILSNASGGVNPEFEVGDIMFITDHINLMPNPLIGNYNEENGPRFVDMSEAYDTK
                     LLNTAKKIARHHGIYYKTGVYAAVSGPTYETPAEYK"
     gene            complement(551..>1524)
                     /gene="lpxK"
                     /locus_tag="QF480_02260"
     CDS             complement(551..>1524)
                     /gene="lpxK"
                     /locus_tag="QF480_02260"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: protein motif:HMM:NF014645.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009029 - tetraacyldisaccharide 4'-kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HJN05415.1"
                     /translation="FSIPVIGVGNLSLGGTGKTPVVEYLIRLLSDESKLAVLSRGYGR
                     NTKGFLIANQYSGHKDIGDESLQYHNKFTQNVKVAVCEDRREGITNLMQDDENLDVIL
                     LDDSFQHRYVKPGLSILLTDFHNLYMKDYLLPAGTLRDVVSEAKRADIIIVTKTYKVL
                     SPITRRRIKGILKPHENQSLYFSYLSYGNLIPFPGFDDHKSPKNVSTIVLFCGIANSY
                     PLQEYLRDMCVDLLVLDFPDHHTYRKKDMNLISRTYDDAFTRNKIIITTEKDAMRLIK
                     SDYISMLSNVPLFYIPIEVKFHGLDNANFSNQIKKYVSENKRDISVY"
BASE COUNT          489 a          291 c          245 g          499 t
ORIGIN      
        1 cttatattca gcaggagttt cgtaagttgg accacttaca gcagcataaa ctcctgtttt
       61 gtaataaatc ccatgatgtc gtgctatttt ttttgctgta ttaagtagtt tagtgtcata
      121 tgcttcgctc atgtcgacaa atctgggacc gttttcttca ttataatttc caattaaagg
      181 atttggcatt aaatttatat ggtcagtgat aaacatgata tcaccaacct caaattcagg
      241 attaacacct ccacttgcat ttgaaagaat taaatatttg attcccaaat tttgcatcac
      301 cctgacgggc atagtaattt cttgcatact atagccttca taaaagtgaa agcggccctg
      361 caaagctaca acttgaacac cgtttaactt accgaatatc atttgaccct gatggccgtc
      421 aacagttgat aacggaaaat ttggaatctc cttatatggt atctctatgt cagcttcaat
      481 ttctttagca agatcaccga ttcctgaacc tagtattaga ccaatatatg gaacctcact
      541 tattcgctta ttaatatacg ctgatgtctc ttttattttc actaacatat ttcttaattt
      601 gattcgagaa atttgcatta tcaaggccat gaaattttac ttcgatagga atataaaaca
      661 atggcacatt acttaacatg ctaatataat cagattttat taaacgcata gcatccttct
      721 cagtagtaat gataatttta ttacgcgtaa atgcatcatc gtaggttctc gagatcaagt
      781 tcatatcttt tttacgataa gtatgatgat ccggaaaatc aagaaccaga agatcaacac
      841 acatatcgcg taaatactct tgtaatggat aagaatttgc aataccacaa aataaaacaa
      901 ttgtacttac attttttggt gacttgtggt catcaaatcc cggaaaggga attaggttgc
      961 catagctaag gtaggagaaa taaaggcttt gattctcatg aggttttagg atgcccttta
     1021 ttctacgtcg tgttatggga gataatactt tgtaagtttt agtaactata attatatcag
     1081 cacgtttcgc ttctgacacc acatctcgta aagtaccagc aggtaataaa taatccttca
     1141 tataaagatt atggaaatca gtaagaagaa tagacaatcc cggtttaaca tatcgatgct
     1201 gaaatgagtc atctaataaa ataacgtcca gattttcatc atcctgcatt aggttcgtaa
     1261 tcccctcccg cctgtcttca caaactgcaa cttttacatt ttgtgtaaat ttattgtgat
     1321 attgcaatga ctcatcacca atatctttat gacctgaata ttggttagct attaaaaagc
     1381 ctttggtatt tcgtccatat ccgcggctaa gcacagcaag tttactttca tctgaaagaa
     1441 gcctaataag atattcaaca acaggcgttt taccagttcc gccaagactt aagttaccaa
     1501 caccgataac aggaattgag aagg
//
LOCUS       DASCQP010000134         4854 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000562802, whole genome shotgun sequence.
ACCESSION   DASCQP010000134 DASCQP010000000
VERSION     DASCQP010000134.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4854)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4854)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4854
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000562802"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..506)
                     /locus_tag="QF480_02265"
     CDS             complement(<1..506)
                     /locus_tag="QF480_02265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05416.1"
                     /translation="MAVVGNKILAVGSLEELKAAVGDQQYTINNTFDDKVIIPGLIAQ
                     HDHPLLSSLAMMSEIIAIEDWVLPNKTSLAANNQEEYRQRLKEANKQLKTEDELLFSW
                     GYHPSFHGPLTRSDLDKLSSTRPIIIWHRSCHEFFLNSYALNTLGIDEDFVSKFSKAA
                     KEQSNLSEG"
     gene            complement(815..1174)
                     /locus_tag="QF480_02270"
     CDS             complement(815..1174)
                     /locus_tag="QF480_02270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05417.1"
                     /translation="MKTLITISTLVLTITIVLSSHIFTVATDFLESEKCEIYETPTCS
                     NSLASNNKLATMVNYYFDEEEYINDIPFNTNNISAEANYLKAIEKDFDFEQESFIDDI
                     PFNTIYLVQNLNNATSK"
     gene            complement(1412..2077)
                     /gene="rsmI"
                     /locus_tag="QF480_02275"
     CDS             complement(1412..2077)
                     /gene="rsmI"
                     /locus_tag="QF480_02275"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005842662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0000451 - rRNA 2'-O-methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HJN05418.1"
                     /translation="MSKLIIVPTPIGNLDDITFRAIKVLQSVDLILTEDTRNSGKLLK
                     HFDIETRMSPYHQHNEHKVVDNIAKRIANGETMALITDAGTPAISDPGFLLIRKCIIE
                     NIEIECLPGATAFVPALVNSGLPSDKFFFEGFLPHKKGRQTRLKTLAQLPCTVVLYES
                     PHRLLKTLMQLSEFFGADRKVSVSRELTKLHEETIRGTLTEVIKHFTNNTIKGEIVIV
                     LGH"
     gene            complement(2135..2956)
                     /locus_tag="QF480_02280"
     CDS             complement(2135..2956)
                     /locus_tag="QF480_02280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05419.1"
                     /translation="MDKEKIIIRLSTQIDTLNAHINRLKRSGYNIHSLDIDMLKQKTI
                     EFYEMIFDLEPLVNKNADLKKDNIIIPEPKTNEKLKEEDEVTIEETVEEEIVTPSSEV
                     NETEEVIEESKIAKPVITTQPIAAEPKTKQAPPPIVEEIGTVNKEEDELEEPDVIQNS
                     IQQTAYELFSASTDNPVAEKYQIKDEQSIADKIQKSNISNIREAIGINEKFLFINELF
                     NGDLGRYNKILDDINELPTKKGVDTYLFELKIEFQWTDENEAYIILKEILERKIN"
     gene            3072..3653
                     /locus_tag="QF480_02285"
     CDS             3072..3653
                     /locus_tag="QF480_02285"
                     /EC_number="2.7.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009596798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004797 - thymidine kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine kinase"
                     /protein_id="HJN05420.1"
                     /translation="MFLEKDKNYSVKSGWIEVVCGSMFSGKTEELIRRLNRARIAKQK
                     VEIFKPTVDTRYDEEQVVSHDSNSVSSTPVENATQILFYAEDFEVVGIDEAQFFGNEL
                     VNVCIELAAKGKRVIVAGLDMDYLGNPFGPIPNLMATAEYITKVHAICMRCGNLANYS
                     HRIIKNDKLVVLGENDAYEPLCRSCFQEALKEK"
     gene            3747..4289
                     /locus_tag="QF480_02290"
     CDS             3747..4289
                     /locus_tag="QF480_02290"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005642073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0016018 - cyclosporin A binding [Evidence
                     IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HJN05421.1"
                     /translation="MKKIFFILGLILSIQLVGQTEKPETIAVIHTTLGDITVKLNNDT
                     PLHRDNFIKLVNEGWYEDSPFHRVINNFMIQGGHNKDGKVDPGYTIKAEILPNHSHKK
                     GVLAAARMGDQVNPERNSSGCQFYIVQNQRGTPHLDGGYTIFGEVIMGLDVVDKIAAV
                     QTGRGDVPVETVTMKIEIED"
     gene            4338..>4854
                     /locus_tag="QF480_02295"
     CDS             4338..>4854
                     /locus_tag="QF480_02295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002561121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HJN05422.1"
                     /translation="MKERIGNLLDDVNAFNASNIEQLEAFRIKYLSKKGVITALFSDF
                     KNVPTEQRKEIGQLINGLKITVQEKIVSLKKGFENTNESKDKPDLTLPSDSPLGARHP
                     LSIVRNNIIDIFARIGFTVSEGPEIEDDFHNFSALNFPLDHPARDMQDTFFIEKDPDI
                     ALRTHTSSVQVR"
BASE COUNT         1522 a          786 c          853 g         1693 t
ORIGIN      
        1 ccttccgata aattagattg ttctttagct gcctttgaaa atttacttac aaaatcctca
       61 tcaataccta aagtatttaa tgcgtatgaa ttcaaaaaaa attcgtgaca tgaccgatgc
      121 catataatga ttggacgggt agagcttagt ttatctaagt cagagcgagt taatggacca
      181 tgaaaagatg gatgatatcc ccagctaaaa agtagttcgt cttctgtttt taattgctta
      241 tttgcttcct ttaagcgttg tcgatattct tcttgattat tggcagcaag cgaggttttg
      301 ttgggcaata cccagtcttc aatagcaata atttcagaca tcatagctaa actgcttaat
      361 aacgggtggt cgtgttgtgc aattaagccg ggtataatta ctttgtcatc aaaagtatta
      421 ttaatggtat attgctggtc tcctacagca gcttttagtt cctccagtga tccaactgca
      481 agtatcttat ttccaacaac ggccactgct gaggctttcg gtttatcggg atcgagagta
      541 atgatttctt tagcagtata gatagtaact tttggtcatt atgaactgga actccccatt
      601 cttcatcgtg atatatagta tcaagatgcc tgtcgcctgg ccatggacat cttttttgtt
      661 ttgattcaat cataatcccc ctttatttat tattagcttt aatgttacaa atataaaata
      721 ctttataaaa aaatcccggc ataaccggga ttttaatggt tcacacaatt actaacatgt
      781 atttctaaat tacaaatttg ctggcataat ttatttattt actcgtagca ttattcaaat
      841 tctgaaccag atatatagtg ttgaaaggga tatcatcaat gaatgattct tgttcaaagt
      901 caaaatcttt ttcaatagct ttcaaatagt ttgcttctgc tgatatgttg ttggtattaa
      961 atggtatatc atttatatat tcttcttcgt caaaataata gtttaccatt gtcgctagtt
     1021 tgttgttaga agctaagcta ttagaacaag taggcgtttc gtatatctca catttttctg
     1081 attctaaaaa gtcagttgcc actgtaaaaa tatgtgatga taatacaatt gttatagtta
     1141 agactagtgt tgatattgtt attagtgttt tcatgtttaa tacacttttg agattctgat
     1201 tcatagttag ccatattcgt gccaaagttt ctaatacgca ctaaatgaga atataatgag
     1261 tgctaactgg aaatgatgtg agactaatta gtgctatttt tcgaacatat tttgtgcgta
     1321 aacgaacacc ttttcgttgt tcattatgga tagttagctg atcactaaaa ttaatttgag
     1381 taatactgtt atcatagctg acaggtgata attagtgccc taacactatt actatttcac
     1441 cttttatagt attattagtg aaatgtttga taacttcagt tagcgtccca cgtattgttt
     1501 cttcatgaag cttggttaat tctcgagaaa ctgacacctt cctgtcagca ccaaaaaact
     1561 cacttagctg cattaacgtt tttaggagcc tgtgagggga ttcgtacaaa acgacagtac
     1621 atggaagttg ggctaaagtt ttgagtctgg tttgtcttcc ctttttgtgt ggaaggaaac
     1681 cttcaaagaa aaatttatct gatgggaggc cagaattaac gagtgctgga acgaaagctg
     1741 ttgcacccgg aagacactca atttcaatat tttcaattat acatttacgg attaataaaa
     1801 aaccgggatc agaaattgca ggtgtgcctg catcagtaat aagtgccatt gtttcaccgt
     1861 tggcaatacg tttggctata ttatcaacca ctttatgttc gttatgctgg tgataagggc
     1921 tcattcttgt ttcaatgtca aaatgtttga gtagttttcc actattgcgt gtatcctcag
     1981 taagtataag atcaactgat tgtaatacct taatagctct aaacgtaata tcatcgaggt
     2041 taccaattgg agttgggaca atgattaatt ttgacatatt aaaattatta tctgatgtat
     2101 atacggtggt tatttaagtt ttcaaatata ggcgttagtt aattttcctt tcaagaatct
     2161 ctttcagtat aatataagcc tcattttcat cggtccattg aaactcaatt ttaagttcaa
     2221 aaagataagt atcaacaccc tttttggttg gaagttcatt aatatcgtct agtattttat
     2281 tatatctgcc caaatcacca ttaaataatt cgttgataaa aagaaacttt tcgttaattc
     2341 caatggcctc tcttatattc gatatatttg atttttgaat tttatcagcg atactttgct
     2401 catcttttat ttggtatttt tctgcaactg gattatcggt gctggcagaa aataattcgt
     2461 atgcagtttg ttgtatagaa ttttgaatta catctggttc ttctaattca tcctcctctt
     2521 tatttactgt tcctatttct tccactatcg gaggtggagc ctgttttgtc ttaggttccg
     2581 ctgcaattgg ttgagttgtt ataacaggtt tagcaatctt tgattcctca attacttctt
     2641 ctgtttcatt aacctcagat gatggtgtca caatttcttc ttctacagtt tcttcaatag
     2701 taacttcatc ttcttccttt aatttctcat tagttttggg ttcaggaata attatgttgt
     2761 ctttctttaa atcagcattt ttattaacta atggctcaag atcaaaaatc atttcataaa
     2821 attcaatagt tttctgcttg agcatatcaa tatctaacga gtgaatatta tacccgctcc
     2881 ttttaagcct attaatatgt gcatttaaag tatcaatttg cgtgcttaac ctgataatta
     2941 ttttttcttt atccattggt aaaaagttcc ttatttttgt aagccaaata aatttttgaa
     3001 caataaataa aataaacgca tttttatttg gtataatgct caaaagtaaa aagaatatca
     3061 ataattagct gatgtttctt gaaaaagaca agaattattc tgtaaaatca ggatggattg
     3121 aggtagtttg cggatctatg ttttcaggca agactgaaga actgataaga agattgaacc
     3181 gtgcaagaat agcaaaacag aaggttgaaa tttttaaacc aacggttgat acaagatatg
     3241 atgaagaaca agtcgtgtcg catgattcca attctgtatc ttctacgcca gttgaaaatg
     3301 ctactcaaat attgttttac gcagaagatt ttgaagtagt tggtatcgat gaggcacagt
     3361 ttttcggaaa cgagcttgtg aatgtttgta ttgaactagc tgccaaaggt aaaagagtga
     3421 tagtagctgg cctcgatatg gattatttag gcaacccttt tggccctata ccaaatctaa
     3481 tggcaactgc cgagtatatt accaaagtac atgctatttg tatgcgttgt ggtaacctgg
     3541 ctaactattc gcatcgaatt attaagaatg ataaacttgt agtccttgga gaaaacgatg
     3601 cgtatgaacc tttatgccgt agttgttttc aagaagctct taaggaaaag tagcaaagca
     3661 gatttactta tttgtttctc ccaagaccca tattttttca tttaccaatt ttattaattt
     3721 tgcttctcat ttaaaaaaat aattgcatga agaaaatctt ttttatactc ggattaatat
     3781 taagtataca acttgtaggt caaactgaaa aacctgagac cattgcggtt atacatacaa
     3841 cattaggcga tattacggtt aaacttaata acgatacacc tcttcaccgt gataatttta
     3901 tcaaacttgt taatgaagga tggtacgaag attcaccttt tcacagggtt attaataact
     3961 ttatgattca gggtggtcat aacaaagacg gtaaagttga tccaggatat actattaagg
     4021 ctgagattct tcccaaccac tctcacaaaa aaggggtact agctgcagca cgtatgggtg
     4081 atcaggtaaa tccagaaaga aattcctcag gatgtcagtt ttacattgta caaaaccaaa
     4141 gaggtactcc acatcttgat ggtggatata ctatttttgg agaggttatt atgggattag
     4201 atgttgttga caaaattgct gctgttcaaa caggaagagg agatgttcct gttgaaacag
     4261 ttacaatgaa aatagaaata gaagattaat aactttctat aataactgta aattacggtt
     4321 ataaataagg agtgaaaatg aaagaaagaa taggaaactt gcttgatgat gtgaatgcgt
     4381 ttaatgctag taatattgaa cagttagaag ctttcagaat aaaatatttg agcaagaaag
     4441 gtgtaatcac agccttattt tccgacttca aaaacgttcc taccgagcaa agaaaagaaa
     4501 taggacaatt gataaatggt ttaaaaatca cagttcaaga gaaaattgtc tcattaaaaa
     4561 aggggtttga aaatactaac gaaagtaaag ataaacctga tcttacactt ccttcagatt
     4621 caccgttagg agccaggcac cctttatcaa ttgtacgaaa taacataatc gacatatttg
     4681 cacgcattgg gtttaccgta agtgaaggac ctgaaataga ggatgacttc cataattttt
     4741 cagcacttaa cttccctttg gaccatccag cacgtgatat gcaggacaca ttttttatcg
     4801 aaaaggatcc tgatattgcc cttcgtactc atacttcttc tgttcaagta aggg
//
LOCUS       DASCQP010000135         3209 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000567181, whole genome shotgun sequence.
ACCESSION   DASCQP010000135 DASCQP010000000
VERSION     DASCQP010000135.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3209)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3209)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3209
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000567181"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            122..1471
                     /locus_tag="QF480_02300"
     CDS             122..1471
                     /locus_tag="QF480_02300"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN05423.1"
                     /translation="MLHSQDASFLTQTVDDNFDGPAGICVSDINNDNHNDIICAGLSA
                     NSIAWWQNQGGLPLEWKKQIIAEDFGGAIYVSAGDIDGDGLTDVLGAAFDDHELAWWR
                     NDGGDSIEWTKYEIKQSFTNAHEIMPIDIDNDNDMDVIGVSAGLSTILWFENDGNFPV
                     DWTEHTIVTNFGGARSVDAKDIDGDGDIDLAGAALSDHEIAWWRNDGGSPINWTKITI
                     NSTFTWAHKVQIVDMDKDGKQDILGTAFGNGLSWWKNDGVDTVIWTKQFVSYLNSAVI
                     GWAIDTDNDDDMDIVCSAQDASELVMWENNGETPINWTYELIDNLSGAWPLDYGDLDN
                     DGDIDLVCGGNSANEIRWYENDLLTNIHNNNEKLYNKIDMTFIPNPAHENVSIRFSKK
                     VNFPISINIYNISGKLLSTQTIISEFELIDISQLSNGIYTISTNVNGKVEREKFIVN"
     gene            1513..2682
                     /locus_tag="QF480_02305"
     CDS             1513..2682
                     /locus_tag="QF480_02305"
                     /inference="COORDINATES: protein motif:HMM:NF012958.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase-fold protein"
                     /protein_id="HJN05424.1"
                     /translation="MKTSNTQFNPTKAIITLILIISFSAHLFAKTETEVIAGGERFTI
                     HSKVLDEDRVILIFLPDNYDNSEYNFPVLYVLDGETHFRHVSGATDYLARNGLAPGII
                     VVAITNVDRNRDSSPVHVDNISTSGGAEKFHKFLKKELLPTIKKNYRTTDYNMIMGHS
                     FGGTFIGYSLLEYPEVFNAYIAVSPYLQFADNYIINEAKNKLKSKYDNPKSFYMTVGD
                     EIDFFNPLDEFSDLIKEKSGKAISFQYVQMPRDNHMSTPYLSIFNGLRFIFSDWTLPD
                     ETFQNGLLAIDDHFATVSKKYDYKVVTPENTINNLGYSYLGAGRIPKAIEVFKENVKR
                     FPKSANVYDSLGEAFENNNQLELAKKNYSEAYKLGLAQNLGTTSLFKNNLERVSK"
     gene            2704..>3209
                     /locus_tag="QF480_02310"
     CDS             2704..>3209
                     /locus_tag="QF480_02310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05425.1"
                     /translation="MKIAFVFLITTLLMVVSCKQQLESRLATDLIETQELTGDYMGQP
                     TPGSIPELFAPNIISNGLINRDITFTPEGDEIYTSLSTSDYSYAAVLSSKKVNGIWSN
                     PEVVSFATSPEYVTIEPCISHDGSRLFFATNRPVNDSTKNDDTNIWVVKREGSDWGTP
                     RVFDTIINT"
BASE COUNT         1133 a          501 c          605 g          970 t
ORIGIN      
        1 ccaatctgag tggtttctct ttactccttt agaaaaaaat aactattaac taaaatttga
       61 aaagatgcaa ttattttata ctagagtgcg attatgtgtc atcttattat ttggcagttt
      121 attgttacac agccaagacg cttcattttt aactcaaaca gttgatgata attttgatgg
      181 acctgctggc atttgtgtat cagacataaa taacgacaac cacaatgata ttatttgtgc
      241 cggattgagt gcaaattcaa tagcatggtg gcaaaatcaa ggaggtctgc ctcttgaatg
      301 gaaaaaacaa attattgcag aagatttcgg gggagctatt tatgtttctg caggcgatat
      361 tgatggagat ggacttacag atgtattagg agcagccttt gatgatcatg aattagcctg
      421 gtggcgaaat gatggtggag acagtattga atggactaaa tatgaaatca aacagtcttt
      481 tactaatgct catgagataa tgccaattga tattgataat gataacgaca tggatgttat
      541 aggagtatca gctggtctaa gcacaatact ttggtttgaa aacgatggca actttccggt
      601 tgattggaca gagcatacaa ttgttacaaa ttttggcgga gcaagatcgg tagatgccaa
      661 agatattgat ggagatggag atattgattt agctggggcg gccttatcag accatgaaat
      721 tgcatggtgg cgaaatgacg gaggttctcc cattaactgg acaaaaatta caataaattc
      781 tacattcaca tgggcacaca aagttcaaat tgttgatatg gataaagatg gcaaacaaga
      841 tatacttgga actgcgtttg gaaatggact tagctggtgg aagaacgatg gtgttgatac
      901 agttatatgg accaagcaat ttgtatctta cttgaactca gcagttattg gctgggcaat
      961 tgatacagat aacgatgacg atatggatat tgtttgttca gctcaggatg cctcagaatt
     1021 agtaatgtgg gaaaacaatg gcgaaactcc aattaattgg acatatgaat taatcgacaa
     1081 cttatcagga gcctggccgc tcgactatgg cgaccttgat aatgatggtg acatcgattt
     1141 ggtttgtggt ggaaattcag ctaacgaaat aaggtggtac gaaaatgatc tgttaaccaa
     1201 tattcacaac aataatgaaa aattatacaa taaaattgac atgacattta taccaaatcc
     1261 tgcacatgaa aatgtttcaa ttcgattttc aaaaaaagtt aatttcccga taagcattaa
     1321 tatctataat atttctggta agctgctaag cacacaaact attatatctg aattcgaatt
     1381 aatcgatatt tcgcaactat caaatggcat atatactatt tcaaccaatg ttaatggaaa
     1441 ggttgaaaga gagaaattta ttgttaatta atcattacaa ttataaaaac acacactaaa
     1501 ataaaataca aaatgaaaac ttcaaatact caattcaacc caacaaaagc aataattaca
     1561 ttaattttaa ttattagctt ttcagcacat ttatttgcga aaacagaaac ggaagtaatt
     1621 gcaggtggtg aaagatttac aatacattct aaagtactgg atgaagacag agttatatta
     1681 atctttttgc ctgacaatta tgataatagt gagtacaact tccctgtatt atatgtactt
     1741 gatggtgaga cacattttcg ccatgtaagt ggagcaacag actatcttgc aagaaatggt
     1801 ttagcccccg gtataatagt ggttgcaata acaaatgttg acagaaatcg tgattcttca
     1861 ccagttcatg tggataatat ttcaacaagc ggcggagcgg aaaaatttca caaatttttg
     1921 aaaaaggagt tattaccaac cattaaaaaa aattatagaa ctaccgatta caatatgata
     1981 atggggcatt cttttggcgg aacatttata gggtattctc ttcttgaata tcctgaagta
     2041 tttaatgctt atattgctgt tagcccatat ctccaatttg ctgacaatta tattattaat
     2101 gaggcaaaaa ataaactaaa atcaaaatat gataatccca aaagttttta catgacagtt
     2161 ggtgatgaaa ttgacttttt taatccattg gacgagtttt cggatctaat aaaagaaaag
     2221 tctggtaaag caattagttt tcagtatgta caaatgccgc gtgacaatca tatgtcaaca
     2281 ccatatttaa gcattttcaa tggtcttcga tttatattct ccgactggac acttccagat
     2341 gagacattcc aaaatggact actagcaatt gatgatcatt ttgctactgt ttcaaaaaag
     2401 tatgattata aagtagtaac tcctgaaaat actataaata accttggata ttcttattta
     2461 ggggctggga gaattccaaa agcaattgaa gtatttaaag agaatgtaaa acgattcccg
     2521 aaatcagcta atgtttatga tagccttggt gaggcttttg aaaataacaa ccagcttgaa
     2581 cttgcaaaga aaaattatag tgaagcttac aaattaggac tagctcaaaa tcttggcaca
     2641 acatcacttt ttaagaataa ccttgaaagg gtgtcaaaat aatcaaataa ataccaattt
     2701 gtaatgaaaa tagcatttgt ttttctcatc acaaccttgc tcatggttgt ttcatgtaag
     2761 caacagttgg aatcaaggct agcaacagat ttaattgaaa ctcaagaatt aacaggtgat
     2821 tatatgggac aaccaacccc gggctcaatt cctgaattgt ttgctcccaa tataatttca
     2881 aatgggctca ttaaccgcga cataacattt acacctgaag gagatgagat atatacttca
     2941 ttgtctacta gtgattatag ctacgctgca gtgctttcat cgaaaaaggt taatggaata
     3001 tggagcaatc cggaagtagt ttcatttgct accagtcctg aatatgtaac aattgaacca
     3061 tgtataagcc atgatggaag tcggttattt tttgcaacca accgacctgt aaacgactca
     3121 acaaaaaatg atgacaccaa tatatgggtt gtgaaaagag aaggtagcga ttggggaaca
     3181 ccacgtgtat ttgacacaat aattaatac
//
LOCUS       DASCQP010000136         3130 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000571051, whole genome shotgun sequence.
ACCESSION   DASCQP010000136 DASCQP010000000
VERSION     DASCQP010000136.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3130)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3130)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3130
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000571051"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..534)
                     /locus_tag="QF480_02315"
     CDS             complement(<1..534)
                     /locus_tag="QF480_02315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05426.1"
                     /translation="MSDISKRIHESLLINTFFSIRMQAEVYWPEYDKNILTNIDPIKL
                     DANNWDKHKREFFRQRFNFSQFEIKEEFILHEKKIVRTFKTDGLPPGTTTRSIVRFEL
                     LCHKYLAFLENEAIKENVDFGYNTLKLTNRATSVELKERFTTLYTILSDKDVIRTNRE
                     IFQRAFSGRVTREPLNIK"
     gene            complement(546..1691)
                     /locus_tag="QF480_02320"
     CDS             complement(546..1691)
                     /locus_tag="QF480_02320"
                     /inference="COORDINATES: protein motif:HMM:NF012798.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HJN05427.1"
                     /translation="MRVNLKKRPAKNGMVKLYLETYFGYHKDPETGKIKHSRKKEAIS
                     FELYEKPKNRDQKEKNTQVMDLAEKMRAEKYLSLSKKNAGVYDTNLLKSNFFDYAVKK
                     IETSITSNNNIGGLNSALKQFKKYTFKEKGRERLNFEEITTQYLEGFQHYLKKEATHR
                     KGKLVKHNTALAYWRKIAGFIQNAVKDGIIEIDPTLKVKPIKAQEVIKYKLTFEDVTA
                     LTNTEIDDGQIKDVFLFSCYTGLRFGDIQKLKYKDIIEVKPNEYIIRIQQNKSVKVVE
                     IPVEEALKIIGLPNKDNYLDHLFEGLHYNSHKLSLIRDWCIDAGIYQKVTWHTARHFF
                     GDYIYFKTGDIMLVADLMGDTIETVTRNYVKKVDSEKKRDAIRNVKF"
     gene            complement(1820..>3130)
                     /gene="mnmE"
                     /locus_tag="QF480_02325"
     CDS             complement(1820..>3130)
                     /gene="mnmE"
                     /locus_tag="QF480_02325"
                     /inference="COORDINATES: protein motif:HMM:TIGR00450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HJN05428.1"
                     /translation="SKSLSYFMSPFKPSKKGLSAKYIESSKLYLGNFMADDQIIDEVL
                     ISYFKSPASYTTEDIIEISCHGSEFIQQKIIEILIIAGARAADPGEFTLRAFLNGRID
                     LSQAEAVADLIASQSDSSHRIALNQMRGGISDKISILRQKLLDFASLIELELDFSEED
                     VEFANREQFFSLITELQEELSLLINSFSMGNVIKQGIPVAIIGKPNVGKSTLLNVILN
                     EEKAIVSHIPGTTRDAIEDTIILSGYRFRFIDTAGLRQSDDVIEKIGIERTYDKIDQA
                     TIILYVCDISNLSKEKIENVLEEFRNYIQDESKHFILVANKIDKLSQPPSHLKEILEL
                     DTVFVSAKRKENINLLTDILVRTVKKFNITNDVIVSNSRHYQALVNANNAMRQVEEGF
                     NNNVPTDLIAIDIRQALHELGTITGEITTDEVLGNIFGKFCIGK"
BASE COUNT          926 a          572 c          450 g         1182 t
ORIGIN      
        1 tttaatattt aatggttctc ttgttaccct gcctgaaaaa gccctttgaa aaatttcacg
       61 attggttctt ataacatctt tatcacttag aattgtatat aaggttgtaa acctttcctt
      121 tagttcaaca ctagtagcac gattagttag tttcaatgtg ttatatccga aatcaacatt
      181 ttcctttatc gcttcatttt caagaaaagc taaatactta tgacataata attcaaatct
      241 aacaattgat cttgttgttg ttccgggagg aagcccatca gttttaaatg ttcggacaat
      301 ctttttctca tgtagtataa attcttcttt aatttcaaat tgtgaaaagt taaatctctg
      361 cctaaagaat tcccttttgt gcttatccca attattggca tcaagtttaa tcggatcgat
      421 attagttagt atatttttat catattcagg ccaataaact tctgcttgca ttcttattga
      481 aaagaaggta ttaatcaaaa gtgattcgtg tattctttta cttatatcgc tcatgtcatt
      541 tttgattaaa atttaacatt tctaattgca tccctttttt tctctgaatc taccttcttt
      601 acatagttcc ttgtaacagt ttcaattgta tcacccatta aatcagcaac tagcataata
      661 tcaccagttt taaaataaat gtaatctcca aaaaaatgtc tagcagtatg ccatgtgact
      721 ttttgatata tgcctgcatc aatgcaccaa tctcgaataa gtgataattt atgagaattg
      781 taatgtaatc cttcaaataa atgatctaga tagttatctt tatttggaag gccgattatt
      841 tttaaagctt cttcaaccgg aatttcaaca acttttacgg atttattttg ttgaattctg
      901 atgatatact catttggttt aacctcaata atatctttgt atttcagttt ctgaatatca
      961 ccaaatctta atccagtata gcatgagaat aaaaaaacat ccttaatttg cccatcatct
     1021 atttcggtat tggttaaggc agtaacatct tcaaaagtga gtttgtattt tataacttct
     1081 tgtgctttta ttggttttac tttaagtgtc ggatcaattt caataatacc atctttaaca
     1141 gcattttgaa tgaagcctgc aatctttctc cagtaagcta gcgcagtatt atgctttaca
     1201 agtttgcctt ttctatgtgt ggcttctttt ttaagataat gctgaaaacc ttcaagatat
     1261 tgagtggtta tttcttcaaa gtttaacctt tctcttcctt tttccttgaa agtatatttt
     1321 ttgaattgct tcaatgctga gttcagccct cctatattat tattactagt gatagaagtt
     1381 tcaatttttt tcacagcata atcaaagaaa ttacttttca atagatttgt atcataaact
     1441 ccggcattct tttttgataa tgacaaatac ttttcagccc tcattttctc agccaaatcc
     1501 attacttgag tattcttttc tttctgatct ctatttttag gtttttcata aagttcaaaa
     1561 gaaatcgctt ctttttttct actgtgttta atctttccag tttcagggtc tttgtggtat
     1621 ccgaaataag tttctagata cagcttaacc atgccatttt tggctggtct cttttttaaa
     1681 ttcactctca tttttactcc gttttaatta atagtgtaaa tacagaacaa atataagtca
     1741 aatattatac aaacaaagta aattaagtgt aaattattaa catgttaaat gattgtatat
     1801 caatagatat aaggaattgt cattttccga tacaaaactt cccgaaaata ttccccaata
     1861 cttcatcagt tgttatttcg cccgttattg tgccgagctc atgaagtgct tgccggatat
     1921 caatagcaat taaatcagta ggtacattat tgttaaatcc ttcctccact tgtctcattg
     1981 cattgtttgc gtttactagt gcctggtaat ggcgagagtt acttacaata acatcgttag
     2041 ttatattaaa cttcttaacg gttcttacaa gaatatcagt caaaagattg atgttttctt
     2101 tacgctttgc agagacaaat acagtatcaa gttcaagtat ctcttttaag tgggagggag
     2161 gctggctaag cttgtcaatc ttgtttgcaa ctaatataaa atgttttgac tcatcctgaa
     2221 tatagtttct gaactcctca agcacatttt ctatcttttc tttgctgaga ttactgatat
     2281 cacatacgta taatattatc gttgcctgat caattttatc gtaggtacgc tcaattccaa
     2341 ttttttcaat cacatcatcg ctttgcctaa ggcctgcagt atcaataaac cggaacctgt
     2401 atccacttaa tataatagtg tcttcaatgg catcgcgtgt tgttcccggt atatggctta
     2461 ctattgcctt ttcttcattc agaattacat ttaataatgt tgatttgccg acatttggtt
     2521 tcccaataat cgcaaccgga ataccctgct ttattacatt acccatgcta aatgagttta
     2581 ttaacaagct aagttcttcc tgtaattccg tgatcaaact aaaaaactgc tccctgtttg
     2641 caaattctac atcttcttca ctaaagtcaa gctcaagctc tatcaatgag gcaaaatcaa
     2701 ggagcttttg tctcagaata cttatcttat cacttattcc accacgcatc tgattcagag
     2761 caatccggtg tgaactatca gattgtgatg cgataagatc ggcaacggct tctgcctggc
     2821 taaggtctat acgcccattt aaaaaagcac gtagagtaaa ttcacctgga tctgcagctc
     2881 ttgctcctgc aataataaga atctcaatta ttttttgttg aataaattcc gagccatggc
     2941 atgaaatttc aattatatct tctgttgtat aagatgccgg gcttttaaag tagcttatta
     3001 gtacttcatc tattatctga tcatcagcca taaagttacc aaggtagagt ttagaacttt
     3061 caatatactt ggctgaaagc ccttttttgg aaggcttaaa gggactcatg aagtatgaca
     3121 aactcttaga
//
LOCUS       DASCQP010000137         2064 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000571106, whole genome shotgun sequence.
ACCESSION   DASCQP010000137 DASCQP010000000
VERSION     DASCQP010000137.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2064)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2064)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2064
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000571106"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..297)
                     /locus_tag="QF480_02330"
     CDS             complement(<1..297)
                     /locus_tag="QF480_02330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013613129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HJN05429.1"
                     /translation="MSYSIDHNRIHPLSSLELMANQVVEGFIIGLHKSPFHGFSVEFA
                     EHRQYNAGESTRHIDWKLFGRSDKMFVKRFEEETNLRCRIIIDRSSSMYFPKMDA"
     gene            complement(373..690)
                     /gene="trxA"
                     /locus_tag="QF480_02335"
     CDS             complement(373..690)
                     /gene="trxA"
                     /locus_tag="QF480_02335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008998931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HJN05430.1"
                     /translation="MALEFTDANFEELVIKSDKPVIVDFWAVWCGPCRIVGPIVEEIG
                     NEFENKALVGKLDVDHNPETAKTYGIRNIPTLLFFKNGEVVDKQVGAVPKQVIVNKLE
                     TLV"
     gene            complement(766..>2064)
                     /locus_tag="QF480_02340"
     CDS             complement(766..>2064)
                     /locus_tag="QF480_02340"
                     /inference="COORDINATES: protein motif:HMM:NF025930.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OB-fold nucleic acid binding domain-containing
                     protein"
                     /protein_id="HJN05431.1"
                     /translation="LPQYKIEKVWKDWIAFAGYAFNKSHATCYAYLAYQTAYLKAHYP
                     AEFMAANLGRNLHDIKKITHLISETKRMGISVLGPDINESSASFTVTNDGIIRFGLAA
                     IKGVGEAAVSQIITEREKNNFFSNIFNFVKRVSLKSVNKRSLEALAKAGAFDSFANTH
                     RAQYFFTEGDNSVIFIEKIIKHGASYQEQQQSLQVSLFGDTDTFEVRDPEMPECEQWS
                     LALQLQFEKEVTGFYISGHPLDDYVETMRRYCKIRIEELRNNLEKFNNQQVSFGGMVI
                     DSSQKISKNGDPYGAFTLEDFSGSINLVLFSENYLKKKHMLEPGNNIFIKARVDEKRY
                     QQGSLQIKITDIYLLSETIATLAKAIKLYVPAVSINGDFTNKMTELTKLYQGDTPLQV
                     ELSDPEVNMNILLKSLSAKVNARLFLKALSEEGSLEYTIV"
BASE COUNT          651 a          387 c          313 g          713 t
ORIGIN      
        1 agcatccatt tttgggaaat acattgaaga tgatctgtca ataataatac ggcatcttag
       61 gtttgtttct tcctcaaatc tttttacaaa cattttgtct gatcgtccga aaagtttcca
      121 atcgatatgg cgagttgatt caccggcatt gtattgtctg tgttcagcaa attctacaga
      181 aaacccgtgg aatggacttt tatgcaatcc gattataaaa ccttcaacaa cttgattggc
      241 cataagttcg agcgaactta atggatgtat cctgttatga tcgatagaat aactcattaa
      301 tttaccagaa gaaaagaatt actatggctg aaaggtttaa taaataaatt ttattaacaa
      361 tcaacttaac aactaaacta atgtttctaa tttgtttaca attacctgct taggaacagc
      421 tcctacttgt ttatcaacta cttctccatt tttgaaaaac agtaatgttg ggatatttcg
      481 aattccgtat gttttagctg tttcggggtt atgatcaacg tcgagtttac caactaaagc
      541 cttattctca aattcatttc ctatttcctc aacaataggt ccaacaattc gacatggacc
      601 acaccaaacc gcccaaaagt ctactattac aggtttatct gattttatta caagttcctc
      661 aaaattagcg tctgtgaatt ctaatgccat aattttagat attatttttt tgatcgtcaa
      721 aagtaattaa gaaaaataac ctaccaacca ttttcccaaa aaaaatcaaa ctattgtgta
      781 ttccaaacta ccctcctcag aaagtgcctt aaggaacaac cttgcgttaa cttttgcgct
      841 taatgatttt aacagaatat tcatattaac ttctggatcg gataactcca cttgaagggg
      901 tgtatcccct tgataaagct ttgttaattc tgtcatctta tttgtaaaat ctccattaat
      961 actaactgct ggaacataaa gttttatagc ttttgcaagg gtagctattg tttctgaaag
     1021 taaataaata tcagttattt taatttgcaa actaccttgc tgataacgct tttcgtctac
     1081 gcgtgcttta ataaagatat tattaccagg ctcaagcatg tgctttttct taagataatt
     1141 ttcagaaaat agtacgaggt ttatactacc cgaaaaatct tctaaagtaa atgctccata
     1201 agggtcacca ttttttgata ttttctgaga tgaatcgatt accataccac caaatgaaac
     1261 ttgctgattg ttgaactttt ctaaattgtt ccttagctct tcaattctaa ttttgcaata
     1321 tcttctcatg gtttctacat aatcatcaag tgggtgacct gaaatataaa atcctgtcac
     1381 ctccttttca aattgtaatt gaagagcaag actccattgt tcacattctg gcatttcagg
     1441 atcacgaact tcaaaagtat cagtatcacc gaagagtgaa acctgtaatg attgttgttg
     1501 ttcctgataa gatgcaccat gtttaattat tttttcgata aatataacag aattgtcacc
     1561 ttccgtaaaa aaatactgag cccgatgagt atttgcaaaa ctatcaaacg cgccagcttt
     1621 agcaagggct tccaagcttc tcttgtttac tgatttcaag cttactcttt ttacaaagtt
     1681 gaatatattt gaaaagaaat tatttttttc tctttcagtg ataatctggc taacggcagc
     1741 ttcacctaca ccttttatag cagccaatcc aaaacggatt ataccatcat ttgtaacagt
     1801 aaaacttgcc gaactttcat ttatatctgg tcctagaaca gatatgccca tcctttttgt
     1861 ttcagagata agatgagtta tttttttaat atcatgaagg tttcggccaa ggttagcagc
     1921 cataaactca gcagggtaat gtgctttaag ataggcagtt tgataagcta aatatgcata
     1981 acatgttgca tgtgatttgt tgaatgcata acctgcaaaa gcaatccaat ccttccatac
     2041 cttttcaatt ttgtactggg gaag
//
LOCUS       DASCQP010000138         2107 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000579064, whole genome shotgun sequence.
ACCESSION   DASCQP010000138 DASCQP010000000
VERSION     DASCQP010000138.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2107)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2107)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2107
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000579064"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1653)
                     /locus_tag="QF480_02345"
     CDS             complement(<1..1653)
                     /locus_tag="QF480_02345"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF037667.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family metallopeptidase"
                     /protein_id="HJN05432.1"
                     /translation="MKLTLRLQLLFITIFSVTSTYTYAQSSGGVLSPQQAAYDVNYYD
                     LDLNIDNIALTISGSLICRVEIVNQLDTLVLDLDNRFNVDSTLFKLGNGNYSNVAFDH
                     TNGKLNIEFPFSVGSGNMISVQVFYNGAPRIAPNPPWNGGFVWNSSPIGDPWIGVACE
                     FEGADLWWPCKDHPSDEPDSMSMSFTVPNPLICVSNGRYMGSTVNGNNTTTFDWFIST
                     PINNYNVTIYAAEFALIEDTYIGMTGDSIPFYFWVLPEDSATAANWMGVFLTEFNFLE
                     SICGPFPFTTDKHGWAHAPYWGMEHQTIIAYGHNFSVNSWGFDYIHYHELAHEWWGNL
                     ITAKDFADIWIHEGMATYTEALYVEFLSGMDSYHQYMDNMRPNNNHSSPLAPREQLTA
                     SQGFALNPYSRGASVMHTLRYHLGDDEFFNLFERWAYPDSTDFDNTNGRQCRILSTED
                     MKEQAEEVTGLDLYPFWEVFFREAAYPVLHVVREINEATFTWETENNILLDVDIPITV
                     NGLDETVVMIEGQGSSAISIDDIMEIDPKKWILMAPPSIVVSI"
     gene            complement(1751..>2107)
                     /locus_tag="QF480_02350"
     CDS             complement(1751..>2107)
                     /locus_tag="QF480_02350"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF012478.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HJN05433.1"
                     /translation="ENNITIQPLESGLYFKELAVGEGDSPVKGNMVTIHYLHYDLDGN
                     LLQDSRADNRPFTYIIGTGAVINGWEEAIQRMKKGGKSWVLIPSHLGWGNTQRTKDIK
                     PFTPLVFELEVVEIVK"
BASE COUNT          656 a          423 c          377 g          651 t
ORIGIN      
        1 aatggaaaca acaattgacg gtggtgccat taatatccat tttttgggat caatttccat
       61 tatatcatct atagaaatag ctgaactccc ctgcccttct atcattacaa cagtttcatc
      121 taatccgtta acagtaatcg gaatatccac atccagtagt atattatttt cggtttccca
      181 ggtaaaagta gcttcattaa tttctcttac cacatgcagt accggatagg ctgcttctcg
      241 gaaaaaaact tcccagaagg gatataaatc caggcctgtt acttcttctg cctgctcctt
      301 catatcttcg gttgataaaa ttctgcattg tcgtccgttt gtgttatcaa agtcagttga
      361 gtcgggatat gcccatcttt caaataaatt aaaaaattca tcatcaccaa ggtgataacg
      421 caatgtgtgc attaccgaag caccacgaga atatggattt aaggcgaatc cttgtgacgc
      481 agttaattgt tcacgaggag ctagagggga tgaatgatta ttgtttggcc gcatattatc
      541 catgtattga tgatagctgt ccattcctga caaaaattca acatacaagg cttcggtgta
      601 tgttgccata ccttcatgta tccagatatc tgcaaaatcc tttgccgtaa ttaggttacc
      661 ccaccattca tgagctaatt catgataatg aatataatca aatccccagc tattaacaga
      721 aaagttgtgc ccataggcaa taatggtctg atgttccatt ccccaatacg gagcgtgggc
      781 ccatccgtgt ttatcggttg taaatggaaa cggtccacag attgattcaa ggaaattgaa
      841 ttctgttaga aatacaccca tccaatttgc agctgtagcg gaatcttcag gaagtaccca
      901 aaagtaaaat ggaattgaat caccggtcat acctatgtat gtgtcttcaa tcaaagcaaa
      961 ttcggcagca taaatagtaa cattataatt gttaattggc gttgagataa accaatcaaa
     1021 tgttgtagtg ttattcccat taactgtact gcccatatac ctaccattgg atacacagat
     1081 aaggggattt ggaacagtaa aactcatcga cattgaatcc ggttcgtcag atgggtgatc
     1141 cttgcatggc caccatagat cagcgccttc aaactcacag gctacaccaa tccatgggtc
     1201 accgattggt gatgagttcc atacaaaacc tccattccaa ggtgggtttg gtgcaattcg
     1261 tggtgctcca ttataaaaaa cttgaacgct aatcatattg cccgagccaa ctgaaaaagg
     1321 aaattctata tttagttttc catttgtatg atcaaaggcc acatttgaat agttcccatt
     1381 ccctaatttg aaaagagttg agtcaacatt gaaacgatta tcaagatcca aaacgagagt
     1441 atctaattgg tttacaatct ctacacggca tatgagtgaa ccactaatcg ttagggcaat
     1501 attatctatg ttcagatcaa gatcataata attaacatca tacgcagctt gttgaggact
     1561 tagtacgcct cctgatgatt gggcataagt atatgtagaa gtcacactaa agatagtgat
     1621 aaacaataat tgtaatcgaa gtgttaattt catgatgagt tacttttggt taaaaatccg
     1681 attaacattt atattgtact aacaataaaa atctttaagt agcaaaacta tagcaaaaat
     1741 atcacattgg ttatttcaca atctcaacta cttcaagttc aaatactaaa ggagtgaatg
     1801 gtttgatatc cttggtcctt tgagtatttc cccagccaag gtgtgatgga atcaataccc
     1861 aggattttcc tccttttttc attcgctgta ttgcttcttc ccagccatta attactgcac
     1921 ctgtgcctat tatatatgta aatggcctgt tatctgcacg cgagtcttga agtaagtttc
     1981 cgtccagatc gtaatgtaag taatgtattg taaccatgtt acctttaaca gggctatcgc
     2041 cttcaccaac tgcaagttct ttaaaataaa gtcctgattc aagtggctga atagtaatat
     2101 tattctc
//
LOCUS       DASCQP010000139         2736 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000579252, whole genome shotgun sequence.
ACCESSION   DASCQP010000139 DASCQP010000000
VERSION     DASCQP010000139.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2736)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2736)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2736
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000579252"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(275..724)
                     /locus_tag="QF480_02355"
     CDS             complement(275..724)
                     /locus_tag="QF480_02355"
                     /inference="COORDINATES: protein motif:HMM:NF025494.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4296 domain-containing protein"
                     /protein_id="HJN05434.1"
                     /translation="MQKLFYILGIILLLSSCYNTNKSDSVIPEILLTKSQLVEILTEV
                     QISEANFRISKNRSKASKQKPNYYNKILLEYGITLPQLKANIDYYHNSPAVMEEIYDL
                     VLANLSKIQSEALLEKEELEKAIVADSISKLNDSLELIRIDSLARSL"
     gene            complement(726..>2736)
                     /locus_tag="QF480_02360"
     CDS             complement(726..>2736)
                     /locus_tag="QF480_02360"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008156887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="RecQ family ATP-dependent DNA helicase"
                     /protein_id="HJN05435.1"
                     /translation="IIVSPLIALMKNQVDMIRNFGTQTGIAHVMNSSLSKAEINQVRD
                     DLTKGKTKLLYMAPESLTKEDNVKFLKNIKISFFAIDEAHCISEWGHDFRPEYRKLRP
                     IIKAINPKLNTIALTATATLKVQEDILKNLEISDADVFKASFDRTNLYYEVRPKTKNV
                     IKDIIKYIKTQPSKSGIVYCLSRKKVEEIAESLVVNGIRALPYHAGLDASTRRNNQDM
                     FLMEDVDVIVATIAFGMGIDKPDIRYVVHHDIPKSIEGYYQETGRGGRDGREGNCITF
                     YSYDDIQKLEKFTKDKPVAEQEIAKELLFETVTYTESSVCRHRLLLHYFGESYEKESC
                     GACDNCLNPKEKFEGKDDLQLALKVIFELKEQFKAKIVSEVLAGKMSGDIKSIKLDKL
                     PSFGVGKQNDEKYWVMVIRQALIHRLCVKEIENYGIIKLTESGHEFINNPYSILIAKD
                     HDYESGEDDGIIVKSGGQPQGGSDSVLFALLKDLRKQISREENLPPFVIFQDPSLADM
                     TIQYPISEEELKQISGVGIGKAIKYGKPFLELIASYVEENEITRPNDMVIKSVVNKSG
                     LKVYIIQSIDRKLPLDDIAHAKNLSLSEMLNEIEHIVSSGTKLDISYYVDYKVDEYHQ
                     EEIFDYFSEAETDSIQDALDELGESEFNEEEIRLMRIKFLSEVGN"
BASE COUNT          848 a          506 c          407 g          975 t
ORIGIN      
        1 ttgcagcagc agggttcaat tttagaggac tgctcaagaa aatcaaagaa gaaattcttt
       61 gggcaatttt ttatatcaaa aacattattg aatcaaatgg acaaaacctt agctttgctt
      121 gttcataagg attgtctaac tattctgtaa gtggtacagg aagttacatt aatagtggca
      181 aacttgaatt ttctttcaat cttaatgatg gtatagatat tgaatcgaga attgctgtat
      241 ttaccaaata attcttaaca ggaaaataaa tattttacag gctacgtgct aaactgtcaa
      301 ttcttataag ttcgagactg tcgttcagct ttgatatact atcagcaaca atggcttttt
      361 caagctcttc cttttctaaa agtgcttcgc tttgaatttt acttaagtta gctaatacta
      421 aatcatagat ttcttccata acggctggag aattatgata ataatctatg ttggccttca
      481 attgcggtaa tgtgatccca tactccagca gtatcttatt ataataattt ggtttttgtt
      541 tgcttgcttt acttcggttt tttgaaattc taaagttagc ttcacttatt tgaacctctg
      601 ttaatatttc tactaactgt gatttagtta ataatatctc aggaataaca gagtcacttt
      661 tgttcgtatt ataacatgat gacaggagga gaataatacc tagtatataa aatagttttt
      721 gcatttcaat ttccaacttc agataaaaac ttaattcgca ttaacctgat ttcctcttcg
      781 ttaaactcag attcccccaa ttcatcaagt gcatcttgaa ttgaatctgt ttctgcttca
      841 gaaaaataat caaatatttc ttcttgatgg tattcgtcta ccttataatc aacataataa
      901 cttatatcaa gtttagtgcc tgatgatact atatgctcaa tctcatttaa catttcacta
      961 agggagaggt tttttgcatg ggcaatatcg tccaatggca gttttctatc gatactttgt
     1021 atgatataaa ctttcagtcc tgatttatta accacggatt ttatgaccat atcatttggt
     1081 ctggtaattt cattttcttc aacgtaggaa gcaataagct caagaaatgg tttcccgtat
     1141 ttgattgctt tgccaattcc aactccagaa atttgtttaa gctcttcttc cgaaatagga
     1201 tattgaatag tcatatctgc caacgaggga tcctggaaaa ttacaaaagg aggtagattt
     1261 tcttctcttg aaatttgctt gcgtagatct tttaataatg caaataaaac tgagtctgaa
     1321 ccaccttggg gctgaccacc actcttaact ataataccat catcttcacc actttcatag
     1381 tcatgatctt tagcaattaa gatactgtaa gggttgttta taaattcgtg accactttca
     1441 gttaacttaa ttataccata attttcaatt tccttaacac aaagtcgatg aataagagcc
     1501 tgacgaataa ccattaccca atacttttca tcattttgtt tcccaactcc aaatgatggt
     1561 aatttatcaa gtttaataga cttaatatca ccgctcattt tacctgcaag gacttcacta
     1621 acaattttag ctttaaattg ctccttgagt tcgaagataa cttttagtgc taactgaaga
     1681 tcatctttac cttcaaattt ttctttggga tttaaacaat tatcacatgc tccacagctc
     1741 tctttttcat aagattcacc aaaataatgt aataataatc tgtgccgaca aactgacgat
     1801 tcagtataag taactgtttc aaaaagaagt tctttcgcaa tctcttgctc agctacaggc
     1861 ttatctttcg taaacttctc tagtttttga atgtcgtcat agctataaaa tgtaatacaa
     1921 ttaccctctc ttccatctct acctcctcta ccagtttcct gataataacc ttcaatactt
     1981 ttagggatgt catgatgtac aacatagcgt atatcaggct tatcaatccc cattccaaaa
     2041 gcaattgttg ctacaattac atcaacatct tccataagga acatatcttg attatttcta
     2101 cgggttgaag catcaagacc agcatgataa ggcagggccc taattccatt tacaacaagc
     2161 gattcggcaa tttcttcaac tttcttacga ctcaggcaat acacaatacc cgactttgag
     2221 ggttgtgttt tgatatattt tattatgtct ttaataacat tcttggtttt tggcctaact
     2281 tcataatata agttagtcct atcgaaggat gccttaaaaa catcagcatc agaaatctca
     2341 agatttttaa gaatatcttc ctgtaccttc agagttgcag tggcagttaa tgctatagta
     2401 ttaagttttg gattaatggc tttaataata ggtcggagtt ttctgtattc aggtctgaaa
     2461 tcatgacccc attcagaaat acagtgggct tcatcaatag cgaaaaaaga tatcttaatg
     2521 ttctttaaaa attttacatt atcttcttta gttaatgatt caggagccat ataaagcaac
     2581 ttagttttcc ctttcgtaag gtcatctcta acctgattaa tctctgcctt cgacaaagaa
     2641 gaattcatta catgagcaat tccggtttgt gttccgaaat tacggatcat gtcaacctga
     2701 tttttcatta gggctatcaa aggagaaaca atgatt
//
LOCUS       DASCQP010000140         1658 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000583076, whole genome shotgun sequence.
ACCESSION   DASCQP010000140 DASCQP010000000
VERSION     DASCQP010000140.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1658)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1658)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1658
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000583076"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            668..>1658
                     /locus_tag="QF480_02365"
     CDS             668..>1658
                     /locus_tag="QF480_02365"
                     /inference="COORDINATES: protein motif:HMM:NF014790.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJN05436.1"
                     /translation="MTTSQYNHPDYFCIDDILSDEHKLIRDSVRDWVNRRVIPIIDEA
                     CQKHEFPIHLMKELGEIGAFGPYIPEKYGGAGLDQISYGLIMQELERGDSAIRSAASV
                     QSSLVMYPIFKFGSEEQKLKYLPALASGEMIGAFGLTEPDHGSDPGSMKTRIEDKGDH
                     YLLNGAKMWITNATNADVSVVWAKDENKVVRGLLVEKGMPGFTAPETLRKWSLRASVT
                     GELVFDNVKVPKENLLPGVEGLKGPLMCLNSARYGIAWGVIGAACDCYDTALRYSLER
                     KQFNKPIAGFQLTQKKLAEILTEITKAQLLAWRLGTLRNDDKATPAQISMTKRN"
BASE COUNT          573 a          244 c          312 g          529 t
ORIGIN      
        1 tcatgagatg atttttaaat tagtacgtaa aatgatatgt aaatatataa taattgtaaa
       61 acttaatgta accctttaac ttactcaact tttctgcggc tctgaaaaac tatatgtcaa
      121 ataattaatg ttgtaataaa aatcaagaat ttggtatttc tgatttcttc cttttgagta
      181 atttaatctg tcagtttaat atgttttatt tgattatgaa tttctcgctg ttgataatat
      241 ttatttattc tgacaagtta ttgaaataca atccactatt aagtccaggt ttttaagttg
      301 acttatttca tatatgttaa aattgtaatg agttaaagaa attcttgcaa aacaacatag
      361 tgtattattt tatttttgta ttttcatcgc cgctaaaacc accacttttg tttatttgat
      421 ttgaacatta aactaagtgg taagagcata agggttaaac attaaatgta ctatttgtac
      481 acagtgtttt aagttttatc ataagtactt aatgtactat tttatgatat cggcacccca
      541 aaaaagtcaa aataatttcg attgacttat ttgatcacgg ttcaaagata taatgtgaaa
      601 aatatttatc agaacatttg tacgaattga tttgataaat tcataataat gacaaaaaca
      661 cttgcatatg acaaccagtc aatataatca tcccgactat ttttgtatcg atgatatact
      721 aagcgatgaa cataaattaa ttagagattc tgtcagagat tgggtaaaca gacgtgtaat
      781 accaataatt gacgaagcct gtcaaaaaca cgaatttcct attcacctaa tgaaagaact
      841 tggagaaata ggagcatttg gaccatacat tcctgagaaa tacgggggtg ccggattaga
      901 tcaaatttca tatggtctga ttatgcagga acttgaaaga ggagactccg caatccggtc
      961 tgcagcatcg gtacagtcgt cacttgtaat gtatcctatt ttcaaatttg ggagtgaaga
     1021 gcaaaaacta aaatacttgc ctgcgttagc tagtggagaa atgattggtg catttggtct
     1081 aacagaacct gatcatgggt ctgatcctgg aagtatgaaa acgagaattg aagataaagg
     1141 agaccattac ttattaaatg gtgcaaaaat gtggattaca aacgccacaa atgctgatgt
     1201 tagtgtggtt tgggccaaag atgagaacaa ggtagttaga ggattgttgg ttgaaaaggg
     1261 aatgcccgga tttactgcgc ctgaaacttt aaggaaatgg tctttgagag cctcagttac
     1321 aggtgaatta gtattcgaca atgtgaaagt tcctaaggaa aatctattac caggagttga
     1381 aggattaaag gggccattaa tgtgtcttaa ctctgcccga tacggtattg cctggggagt
     1441 tattggtgct gcatgcgatt gctatgatac cgcattaaga tactcacttg aaagaaaaca
     1501 gtttaacaaa ccaattgccg ggtttcagtt aactcagaaa aaactggctg aaatattaac
     1561 cgaaattact aaagctcaac ttcttgcatg gcgtcttgga actttgagaa atgatgataa
     1621 ggcaacaccg gcacaaatct cgatgacaaa aagaaata
//
LOCUS       DASCQP010000141         3460 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000586159, whole genome shotgun sequence.
ACCESSION   DASCQP010000141 DASCQP010000000
VERSION     DASCQP010000141.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3460)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3460)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3460
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000586159"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..352
                     /locus_tag="QF480_02370"
     CDS             <1..352
                     /locus_tag="QF480_02370"
                     /inference="COORDINATES: protein motif:HMM:NF016027.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016758 - hexosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HJN05437.1"
                     /translation="HKMDMAYVAADFIISRAGAISIAEIIAVRKPAIFIPLPSAAEDH
                     QTKNAITLVDGEAALMIKEENAISSLPDVIKSLVENTELQKTIIKNLDVFSYPDAAYN
                     IAKEANKMIEIYYE"
     gene            345..1697
                     /gene="murC"
                     /locus_tag="QF480_02375"
     CDS             345..1697
                     /gene="murC"
                     /locus_tag="QF480_02375"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR01082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008763 - UDP-N-acetylmuramate-L-alanine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HJN05438.1"
                     /translation="MNNSNKIMYFLGIGGIGMSALARWYKQQGAIIFGYDIQRSQLTE
                     ELINEGMTIHFESDINQIPENISIAIYTPAIPSQNIELIYLKNLGVPILKRAEIIGRL
                     TSDFFTIAIAGTHGKTSISSLTAHLLKNSGIYVTAFVGGICKNYNSNLILSKSTEYMV
                     VEADEYDRSLLQIKPNIAVISSIDEDHLDIYKDYEDLKSTFEQFVKKLPPEGVLIHNS
                     KLGSFDSIDAKNVTYGIKNDASLFASNIHIADGKFIIDIDTEIGKMENVEVQIPGFHN
                     IENTLAATAIAIEIGLSLKNIRTGIITFKGVERRMDFRIDNGKTIFIDDYAHHPEEIK
                     ATISAVKKLYPNKKLTGIFQPHLFSRTRDFAIEFAAELSQLDELILMDIYPAREEPIE
                     DITSHTILNQTTNKKGQIMSKEEILEYLFKNQPEVLVTMGAGDIGLLANEIETQLLMN
                     "
     gene            1694..2488
                     /locus_tag="QF480_02380"
     CDS             1694..2488
                     /locus_tag="QF480_02380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05439.1"
                     /translation="MKRIIYISLFTLTIIGLLTLTGFIVNYNKSNQVSDIEVNIYRNS
                     ELGFLNSGEILHELNRIKNLPLNPEVVDSLIINKLETDKIENVLTNNPYIDEVDSYFT
                     VDGRLLINIKEKEPIIRIYDSGNEGFYIDNNGDIFPISRQFAPRVIIANGYIKDKITN
                     FNSNITDSIYSSSFLQELFYLTQLINQNELLKAQINQIYVNSKGEYDLIPELGNHLVQ
                     FGTFDNAQIKLRNLDAYYRKSLKTDDWDIYKTINLTYKDQIVCTKK"
     gene            2493..>3460
                     /gene="ftsA"
                     /locus_tag="QF480_02385"
     CDS             2493..>3460
                     /gene="ftsA"
                     /locus_tag="QF480_02385"
                     /inference="COORDINATES: protein motif:HMM:TIGR01174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HJN05440.1"
                     /translation="METEIIVGLDIGTTKIACIVGSKNEYGKIEILGYGKTESIGVKR
                     GVVANIENTVQSIRKAVKQAEEKSGVAIKYVNVGIAGQHIKSHQHRGNIIRDDDDKEI
                     TVEEIDSLTQNMYKLSMAPGEEIIDVIPQDYIIDNESGITEPVGMLGNNLEANFHIII
                     GQTASAKNIYKCIKKADLEMVNLILEPIASAEAVLGEEEKEAGVVLVDIGGGTTDIAI
                     FQDKIIRHSAVIPFGGDIVTEDVKEGCTIIKKHAEELKIKFGSALASENRDDEVVAIP
                     GLRGRPPKEITLKNLASIIQARMEEIVEQIFFEIKNSGFEKKLIAG"
BASE COUNT         1304 a          521 c          631 g         1004 t
ORIGIN      
        1 acataaaatg gacatggctt atgttgctgc tgactttatt atttcacgtg ctggcgcaat
       61 ttccattgcc gaaataattg cagtacgaaa accggctata tttattccgc taccatctgc
      121 tgctgaggac catcaaacaa aaaatgcaat aacattagtt gatggagagg cagctcttat
      181 gattaaagaa gaaaatgcaa ttagcagttt gccagacgtg attaagtcac tagttgaaaa
      241 caccgaactt caaaaaacta taattaaaaa tttagatgtt tttagttatc ctgatgcagc
      301 ctacaatatt gcaaaggagg ctaataaaat gatagaaatt tattatgaat aacagtaaca
      361 aaataatgta cttccttggt attggtggta ttggcatgag cgcacttgct cgctggtaca
      421 aacaacaagg tgccattatt tttggttacg atattcagag aagtcaatta acagaagaat
      481 tgatcaacga agggatgaca attcattttg aatcagacat aaaccagata cctgaaaaca
      541 tcagtattgc aatttacaca cctgctattc cttcacaaaa tattgaactt atttatttga
      601 aaaacctagg tgttccaatt ctcaaaagag cagaaataat tggtagacta acgagcgact
      661 tctttacaat agcaattgca ggcacacacg gaaagactag tatttcatca ttaacggccc
      721 acttacttaa aaatagtgga atttatgtga cagcttttgt aggtggtatt tgcaaaaatt
      781 ataactcaaa cttaatatta tctaaatcaa ctgaatacat ggttgttgag gcagatgaat
      841 acgacagatc attgcttcag attaaaccaa atattgcagt gatttcatca attgacgaag
      901 accatctcga catatataag gattatgaag atttaaaatc aacttttgaa caatttgtaa
      961 agaaactacc accggaagga gtgttgatac ataattctaa attaggctct tttgatagta
     1021 tcgatgcaaa aaatgttact tacggtataa aaaatgatgc ttcattattc gcatcgaata
     1081 tccatattgc agatgggaaa ttcattattg acatagatac agagatagga aaaatggaaa
     1141 acgtggaagt tcagattccc ggttttcata acattgaaaa tacattagca gctacagcaa
     1201 ttgctatcga aattggatta tcgctaaaaa acataagaac aggtataatt acttttaaag
     1261 gtgttgagcg aagaatggat ttcagaattg ataatggaaa aactattttt attgacgatt
     1321 atgcccatca tcctgaagaa attaaagcaa caatttctgc cgttaaaaaa ttatatccca
     1381 ataaaaaatt aaccgggata tttcagccac atttatttag ccgaacaaga gactttgcaa
     1441 tcgaatttgc agccgaatta agtcaacttg acgaattaat actgatggat atttatcctg
     1501 ccagagaaga accaattgaa gatataacat cacatacaat acttaatcag actactaata
     1561 aaaaagggca aataatgagt aaagaagaaa tattggagta cttattcaaa aatcaaccgg
     1621 aagtattagt aacaatgggt gctggtgata ttgggctgct tgctaatgaa attgaaactc
     1681 aacttttaat gaattgaaac gaataattta catatcactt tttacattaa ctattatcgg
     1741 gttattaaca ttaacaggat ttattgtcaa ttataataag tctaaccagg tttctgatat
     1801 tgaggttaat atttatcgaa actcagagtt aggttttctt aattctggcg aaatattgca
     1861 tgagttaaat aggattaaga atttgcctct aaatccagaa gttgtcgatt cgttaataat
     1921 aaataaactg gaaacagaca aaattgaaaa cgtattaacc aacaaccctt atattgatga
     1981 agtagatagt tattttacag ttgatggcag gttacttatt aatattaaag agaaagaacc
     2041 gataatcaga atttatgaca gtggtaatga aggattttat atcgataata atggtgatat
     2101 atttcctatt agccgtcaat ttgctccacg cgtaataatc gcaaatggtt atattaaaga
     2161 taaaataacc aacttcaata gtaacatcac cgattcaatt tatagtagtt cttttctaca
     2221 agagctgttc tacctaaccc aactaatcaa tcaaaatgaa ctacttaaag ctcagataaa
     2281 tcagatatat gtgaacagca aaggtgaata cgatctaatt cctgaattag gcaatcatct
     2341 agttcagttt ggaacatttg acaatgctca aatcaagctt agaaatttgg atgcttatta
     2401 tagaaagtct cttaaaacag atgattggga tatctataaa acaataaacc ttacttataa
     2461 agatcaaata gtttgtacta aaaaataatt gtatggaaac tgaaatcatt gtcggactcg
     2521 acatcggcac gaccaaaata gcctgtatag taggtagcaa aaatgaatat ggtaagattg
     2581 aaatactagg atatggtaaa actgaatcta tcggtgttaa acgtggtgtt gttgccaata
     2641 tagaaaacac agttcagtcg attcgaaagg cagtaaaaca ggctgaagaa aaatcaggtg
     2701 tagcaataaa atatgttaat gtaggcattg caggtcagca tattaaaagt catcaacacc
     2761 ggggaaatat tattcgtgat gatgacgaca aggaaataac cgttgaggag atagacagct
     2821 taacacaaaa tatgtataag ttaagtatgg caccaggcga agaaattata gacgttattc
     2881 cgcaggatta tattattgat aatgaaagtg gtattacaga accagttggt atgttaggca
     2941 acaatcttga agctaacttt catataatta ttggccaaac tgcatcagca aaaaatatct
     3001 acaagtgcat taaaaaggct gatctggaaa tggtaaacct aattcttgaa ccaatagcat
     3061 ctgcagaagc agttcttggc gaagaggaga aagaagcagg tgttgttttg gttgatatag
     3121 gaggtggaac cacagatata gctatctttc aggataagat catacgacac tcggcagtta
     3181 tcccatttgg tggcgacatt gtaactgaag atgtaaaaga agggtgtacg attataaaaa
     3241 aacatgctga ggagcttaag ataaaattcg gatcagcact agcaagtgaa aatcgtgatg
     3301 atgaagtagt agcaattcca ggactaagag gcaggccacc taaagaaata actcttaaga
     3361 atcttgcatc aattattcaa gctcgcatgg aagaaattgt tgagcaaata ttttttgaaa
     3421 taaaaaattc agggttcgag aaaaaactta tcgcaggtat
//
LOCUS       DASCQP010000142         3371 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000588825, whole genome shotgun sequence.
ACCESSION   DASCQP010000142 DASCQP010000000
VERSION     DASCQP010000142.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3371)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3371)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3371
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000588825"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1985
                     /locus_tag="QF480_02390"
     CDS             <1..1985
                     /locus_tag="QF480_02390"
                     /inference="COORDINATES: protein motif:HMM:NF039201.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN05441.1"
                     /translation="VLVVSDWTQSPGGYTLDFSASTAVILDDQVPFVDYIGEDLITSC
                     GTNELIIEFNENVKCNSIQANDFKLEGPGGPYTVDSLYGETCALGGDNEREYTLYFSP
                     AIYQGGDFTIEIKQFSFISDACDNYAQNVTYDFFVDLESPNVNAGEDIDIPYAGTATL
                     DGSADGGSGNYFYSWEPPELLDDPNSPNPTTVSLTASTQFFLSVSDLVSTCVGEDTMW
                     VNVVGGPLGITMSASSNEICNGERVDLFVFPDGGSGSYTYVWTSDPSGFNSSEQNPSD
                     FPTDDIWYIVNVTDGYTDITDSIFVIVNEVPTANAGDDQVINEGTSTSLSGSASGGNG
                     AYNYLWEPSSWLVTNTIPNPATLPLYEPTVFSLWVTDENECQSAPDNVLINASGGGLA
                     AFPMSDSMEICLGQSTTIYANATGGGFEYTYEWTSDPTGFTSNQASIYVTPDVTTVYY
                     LLLKDQYENEFEADITITVNPLPEIDLIPEDANVIGIDSIIVCVRDTITLDSGFDIDP
                     PNTEYFWLDANLVNRYYTASTNGNWTDYQSHAVRVTNGYTGCIDSNSITILFDFNECA
                     IGVPENISDLSGIIVIHPNPNNGNFEVAVNENISNLTISIFNTQGKKVFNKYLGENIV
                     SGFSKQITTDLPSGIYLVHLKSGNQFLITKVFIDKK"
     gene            complement(1991..>3371)
                     /locus_tag="QF480_02395"
     CDS             complement(1991..>3371)
                     /locus_tag="QF480_02395"
                     /inference="COORDINATES: protein motif:HMM:NF020123.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="redoxin domain-containing protein"
                     /protein_id="HJN05442.1"
                     /translation="IFLFILVSLSGLSQDVTIVGTAAGQPGKLVRIIDYADQFSKLEQ
                     TIAQTQTNISGEFVLQLDIAKTTFAYLALDLEKGEFYLSPAANYKFNIIADTVLSEQS
                     IFDRLPLNFTVVADDDGTQLAIEDFNIAYNDFIYNNIKVIYKSKDKSVVMNFVIDMQR
                     KYATNQPDYVSNYVEYSLASLLWLSNKESNKQILGNYFINKPVLYDNIQYTEFFKEFF
                     KNYFDGEKIYTYEELILGINSPEPNNKVDELLLRDEQLELDNRVREIVEMLLLSRNYH
                     NRDANKDRIISKLINIARISNYDENRIIAENFIVKLQELQNGTMAPSFTLLNSNNDSI
                     SLDDFQGKFVLLSFVKEDCNICNFYMQLLDDLKKRNGDKFEIVTIIAGDSTNKLTNFT
                     QKKGYQWPILKSGNKILLLEDYKIRAYPSYIFINPDGTIAYAHLPMPDENMELYLQRF
                     MSRYNNKVK"
BASE COUNT         1068 a          575 c          610 g         1118 t
ORIGIN      
        1 atgttcttgt tgttagtgac tggacacaat ctcctggagg ctacactttg gattttagtg
       61 cttcaaccgc agttatactt gatgaccaag tcccatttgt agattatatt ggtgaggatt
      121 taatcacctc ttgtggaaca aatgaactaa ttattgagtt taatgaaaac gttaaatgca
      181 actcaattca agcgaatgat tttaaacttg agggtccggg aggcccatat acagttgaca
      241 gtttatatgg tgaaacatgt gcccttggcg gtgataatga acgtgaatac acattatatt
      301 tttcacctgc aatctaccaa ggtggtgatt ttactattga aataaaacaa tttagcttta
      361 tttcggatgc ttgtgataat tatgcacaaa atgtaactta tgactttttt gtagacttag
      421 aatcaccaaa tgttaatgca ggagaagaca ttgatatacc ttatgcagga acagcaactc
      481 ttgacggatc agcagatggg ggctctggca actacttcta cagctgggaa cctcctgagt
      541 tattagatga tcccaactca cctaatccaa caactgtgag cctaacagcg agcactcagt
      601 ttttcttatc ggtcagtgat ttggtaagta catgtgttgg tgaagatact atgtgggtga
      661 atgttgttgg tggccctctg ggtattacaa tgagtgccag cagcaatgaa atatgcaatg
      721 gtgaaagagt cgacctattt gttttccctg atggcggttc tggaagttat acttatgttt
      781 ggacttcaga tccatccggg tttaattctt ctgagcaaaa tccatcagat tttccaactg
      841 atgatatttg gtacattgtg aatgtaacag atggttacac tgacattact gacagtatat
      901 ttgttatagt taatgaggtc cctacggcaa atgctggtga tgaccaagtg ataaacgagg
      961 gaacatcaac atccttgagc ggaagtgcaa gtggcggtaa cggtgcttac aattatctat
     1021 gggaaccctc aagctggctg gtaacaaata caattccaaa tccagctacc ttaccattat
     1081 atgaacctac agtattttct ttatgggtaa cagatgaaaa tgaatgtcaa agtgcaccag
     1141 acaatgttct aataaatgca agcggtggtg gactagctgc ttttccaatg tctgattcta
     1201 tggaaatatg tttaggacaa tcaacaacaa tctatgcgaa cgcaacaggt ggcggatttg
     1261 aatacacata tgaatggact tcagatccaa ctgggttcac ttccaaccag gcatcaattt
     1321 atgtaacgcc tgatgttaca actgtctatt atctactgtt aaaggatcag tatgaaaatg
     1381 aatttgaagc tgacataaca ataacggtta accctttacc tgaaattgat ttgatacctg
     1441 aggatgctaa tgtaattggc attgattcaa taatagtgtg tgtacgcgac accataacac
     1501 tcgattccgg atttgatatt gatccaccga atacggaata tttttggttg gatgctaacc
     1561 tcgtaaaccg ttattataca gcttctacaa atggtaactg gactgactat caaagtcacg
     1621 ctgttagggt aactaacggt tataccggct gtattgattc aaatagtata actattttat
     1681 tcgattttaa tgaatgtgct ataggtgtac ctgagaacat atcagacttg tctggcatta
     1741 ttgttattca tccaaatccc aataatggta attttgaggt tgcggtaaat gagaatatta
     1801 gcaacctcac tattagcatc tttaatactc aaggtaaaaa agtatttaac aaatatttgg
     1861 gtgaaaatat agttagtgga ttttcaaagc aaataacaac tgatttgcca tcaggaatat
     1921 atcttgttca tctaaaatcg ggtaatcaat ttcttatcac aaaagttttt atcgataaga
     1981 aataaagaag ttatttaacc ttattgttat atctactcat aaacctctgt aaatatagct
     2041 ccatattttc atctggcatt ggaagatgag catatgcgat tgtgccatca ggattaatga
     2101 aaatatatga aggatatgca cgtatcttat aatcttcgag taatagtatt ttgttacctg
     2161 acttcaatat tggccattga tatccttttt tctgagtaaa gttggtcaat ttattagtac
     2221 tatctcctgc gataattgtg acaatctcaa acttgtctcc atttcgcttc ttaagatcgt
     2281 caagaagttg catataaaaa ttacaaatat tacaatcttc tttaacgaaa gataacaaca
     2341 caaacttacc ctgaaaatca tctaatgaaa tggaatcatt attagaatta agtagggtaa
     2401 atgatggagc cattgtacca ttctgtagtt cttgtaattt aacaatgaaa ttctctgcaa
     2461 tgattctgtt ttcatcgtaa ttagaaatac gggcaatatt tatcagcttt gaaataattc
     2521 ggtctttatt tgcatctcgg ttatgataat ttcttgatag caataacatc tcaacaatct
     2581 cacgaaccct gttatcaagc tctaattgtt cgtcacgtag tagcagctca tcaactttgt
     2641 tattaggttc tgggctatta atgccaagaa taagttcttc ataagtatat atcttctcac
     2701 catcaaaata gtttttgaaa aactccttaa aaaattcagt gtattgtata ttatcgtata
     2761 gtactggctt gttaataaag tagttaccaa gtatctgctt gttgctttct ttgttgctta
     2821 accataataa tgatgctaat gaatattcaa cataattact aacgtaatca ggttgattag
     2881 tagcatattt cctttgcata tcaattacaa aattcattac caccgatttg tctttactct
     2941 tgtaaataac cttgatatta ttgtaaataa aatcattata tgctatatta aaatcctcta
     3001 tagcaagctg tgtgccgtca tcatcagcaa ctactgtaaa atttagtggg agcctatcaa
     3061 atatagactg ctcgcttagt acagtgtcag caataatatt gaatttataa tttgctgccg
     3121 gtgacaaata aaactctccc ttttcgagat ctaaggctaa atatgcgaat gttgttttgg
     3181 caatatcaag ttgtagaacg aactcacctg atatgttagt ttgtgtttgt gcaatagttt
     3241 gttcaagttt tgaaaactga tcggcataat caataattct aacaagtttt ccaggttgac
     3301 ctgcagcggt tccaactatt gttacatctt gcgaaagccc tgataatgaa actagaatga
     3361 aaagaaatat t
//
LOCUS       DASCQP010000143         2444 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000597647, whole genome shotgun sequence.
ACCESSION   DASCQP010000143 DASCQP010000000
VERSION     DASCQP010000143.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2444)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2444)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2444
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000597647"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..282
                     /locus_tag="QF480_02400"
     CDS             <1..282
                     /locus_tag="QF480_02400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05443.1"
                     /translation="IDIELRTTKTEVDAWKLISMIVTSYFDVIEVTDRETGYLRTSWV
                     IQTFKQNTIRTRLIVKLGDTDPLTYKIKLVSEESRRPGTSVKSDELYRE"
     gene            complement(395..1048)
                     /locus_tag="QF480_02405"
     CDS             complement(395..1048)
                     /locus_tag="QF480_02405"
                     /EC_number="3.4.21.105"
                     /inference="COORDINATES: protein motif:HMM:NF013827.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HJN05444.1"
                     /translation="MSKEKRKFIYSLLIPIGLLFIMWMVKIIEYSFNISFVNFGNYPL
                     DIKGVKGIFLMPFIHGDWDHLIANSVPFLILSSALFYFYSSISVRVLVGIWFLSGIWV
                     WFGGRPSWHIGASGLIYGLSSFLFVSGLIRKDTRLAALALIVTFLYGSLIWGAFPDFF
                     PKEKNISWEGHLGGAIAGLVLALYYRNSGPKRKQYSWELEEETDEENDDKAYWKIKQ"
     gene            1371..>2444
                     /locus_tag="QF480_02410"
     CDS             1371..>2444
                     /locus_tag="QF480_02410"
                     /inference="COORDINATES: protein motif:HMM:NF019335.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HJN05445.1"
                     /translation="MNPRTLIILIILFLFVFTKLSAEPEKLVTLSGYITDSKNGETLP
                     GATIFIKSLKAGTVSNNYGYYSITITASRQTIVFSYLGYTDKVVDINLLIDTTLNIEL
                     ISSSQLLNEVVVVGELTNANITNTQMSVNKISSKTIQSIPALLGEVDLVKALQLLPGV
                     KFVAEGSSGLSIRGGSPDQNLILLDEATVYNAGHLMGFFSVFNNDAVKSVELFKGDLP
                     SKYGGRLASLIDIRMKDGNTKEFHGNGGIGLISSRLMLEGPIVKDKASFMVAGRRSYA
                     DIFLRLSSNEDMRDNILYFFDLNAKVNYNINKNNRVFLSAYRGKDVFKNTGFGMKWGN
                     TTGTVRWNHVFHEKLFSNFTFIAS"
BASE COUNT          875 a          393 c          408 g          768 t
ORIGIN      
        1 atcgatattg agttaaggac aacaaaaacc gaagtggatg cttggaaact aattagtatg
       61 attgttacat cctattttga tgtaattgaa gtaaccgata gagaaactgg gtatcttaga
      121 acatcatggg taatacaaac atttaaacaa aatactattc gtactcgttt gattgttaag
      181 cttggggata ctgaccccct aacatataaa ataaagctgg ttagtgaaga atcaaggaga
      241 ccaggaacaa gtgttaagag tgatgaactt tatcgtgaat aggatagagt actgagaaaa
      301 tatggaacta tatttgatga attacaatca cgcttaagta aataataatt ccgaaagaga
      361 tattagcgct atcagtaaat ctggtagtgc ttttttattg ctttattttc caataagctt
      421 tatcatcatt ttcttcatca gtttcttctt ccagttccca ggaatattgt tttcgttttg
      481 gtccggagtt acgataatat aaggctagaa ctaaacctgc tatggctccg ccaagatgtc
      541 cttcccagct aatatttttt tccttgggaa agaaatccgg aaaggctccc caaattaaac
      601 ttccgtacaa aaatgtgaca atcaatgcta aagcggcaag ccttgtatct tttcttatca
      661 gtccactcac aaataaaaaa ctagaaagac cataaattaa tccgcttgcg ccaatatgcc
      721 atgatggtct acctccaaac caaacccata ttcctgataa gaaccaaatt ccaaccagaa
      781 cccgaaccga tatgctacta tagaagtaaa aaagtgctga tgataatatt aaaaatggaa
      841 cagagttcgc tatcaggtga tcccagtcac cgtgtataaa tggcattagg aagattccct
      901 taactccttt aatatcaaga gggtaattac caaagtttac aaagctaata ttgaaactat
      961 attcaattat ttttaccatc cacattataa acaacaaacc gataggtatc aataatgaat
     1021 aaataaactt tcttttctcc ttagacataa acagaactta aataaaactc ttgcaacgta
     1081 aaattgcatc ttcaaataac gtgcctttat tttattagcg acacaaatat gtagctctct
     1141 ctcaaaatta accagtaatg agttaatgaa tataaaaaat ttgtcatttt cttatcttat
     1201 tattcacaca tttagagttt gaaaagatta atataaaaaa tactactttt actcaaatat
     1261 cgtttcactc taattgatta taaatgaaat tatattacag caaaattgca actgtaaaat
     1321 aattgtcttg tcgttaatac aaacatatgc acaattaatt aatctaatct ttgaatccaa
     1381 gaacattaat aatcttaatt attctcttcc tgtttgtatt cacaaaatta agtgctgaac
     1441 cagagaaatt ggtaacttta agcggataca tcacagatag taaaaatggc gaaacgctgc
     1501 cgggtgctac aatatttatt aaaagtttaa aagctggtac tgtatcaaat aattatggct
     1561 attattcaat tactattact gccagcagac agacaattgt tttttcatat cttggatata
     1621 cagataaagt tgtagacata aatttactga ttgacacaac tctaaatatt gagttaatca
     1681 gctcaagcca actgcttaat gaagtagtag tagtaggtga gctaactaat gccaatatta
     1741 ctaacactca gatgagtgta aacaaaataa gcagcaaaac aattcaatcg attccggctc
     1801 tactaggtga ggtagattta gtaaaagctt tacaactatt gcctggggtg aaatttgtag
     1861 cagaaggttc atcaggactt agtattcgtg gtggcagtcc agaccaaaat ctaattctac
     1921 ttgatgaggc aactgtatat aatgcaggtc atttaatggg gtttttctca gtttttaaca
     1981 atgatgctgt taagagtgta gaacttttta aaggagattt accttcaaaa tatggtggtc
     2041 ggctagcctc tctcatagat attagaatga aagatggtaa cacaaaagag tttcatggaa
     2101 atggaggaat tggtttaata tcaagcaggt taatgcttga aggacccatt gttaaagata
     2161 aagcatcatt tatggttgct ggtaggaggt cgtatgcaga tatattttta cgtctttcaa
     2221 gcaacgaaga tatgcgtgac aacatacttt attttttcga tttaaatgca aaagtaaatt
     2281 acaatatcaa caagaataat cgtgtgtttt tatcagccta tagaggaaag gatgttttta
     2341 aaaacacagg gtttggtatg aaatggggaa atacaacagg aactgtaaga tggaatcatg
     2401 tatttcatga aaaacttttc tcaaatttta cttttatagc gagt
//
LOCUS       DASCQP010000144         2895 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000602916, whole genome shotgun sequence.
ACCESSION   DASCQP010000144 DASCQP010000000
VERSION     DASCQP010000144.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2895)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2895)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2895
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000602916"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..832)
                     /locus_tag="QF480_02415"
     CDS             complement(<1..832)
                     /locus_tag="QF480_02415"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HJN05446.1"
                     /translation="MDTIKIYFRDIRFWIILFFFIRLIGITNPPLEIGHNWRQTTVTM
                     VSRNFLETDNNIFYPRIDIAGNKTGITGMEFPLFNYLTYLVSEIFGYQHWYGRLINLI
                     ISSLGLFFFYKLIEKYFMRNIAFSSTLILLFSIWFTYSRKIMPDTFAMSFILAGIYFG
                     TNYFDKNSRSGGFLNLIYYGVLIALGTLSKLPSAYLLIIFLIPILSIEVIFKRKIAFV
                     AASIFSLLPSIIWYFYWVPYLVETYGFLHFFLGKELYQGIIEITNNINSALQNFYENA
                     F"
     gene            complement(907..1599)
                     /locus_tag="QF480_02420"
     CDS             complement(907..1599)
                     /locus_tag="QF480_02420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006847396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HJN05447.1"
                     /translation="MKKDTRVLLAEDDKNLGNVLKAYLEAKSYPTVLCPDGKIAYETF
                     KRGNFDFCILDIMMPEMDGFTLAKKIRKIDKDIPILFLTAKAMQEDRIHGFEVGGDDY
                     LTKPFSMEELLLRIKAIMRRSNSVTDEKSKSVFKFGKYTFEYNRQLLIVDEKEQKLTS
                     KEAELLKLLCENMNNVLDRTVALNKIWFDDSYFNARSMDVYITKLRKYLKEDSSVELI
                     NVHGVGFKLVVS"
     gene            complement(1609..>2895)
                     /locus_tag="QF480_02425"
     CDS             complement(1609..>2895)
                     /locus_tag="QF480_02425"
                     /inference="COORDINATES: protein motif:HMM:NF014567.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HJN05448.1"
                     /translation="ISPVIFEIDKLWLEEKIKKRRKFIEENKSFFRVYDSLNQVLYYN
                     FNNMNSQSDIDQFVLSSDMAEKLLNDLTLSYNQQEPGNFYYSNKVRIDSMITRALKKK
                     EISTKFEFGIYSPATNSMILQKTGKYPEALLKESFIFDLTPLGSLFSYPNKLLVYFPN
                     EKIFIMSQLWVLLFVSVILFLVIIFSFSFSIYIIYRQKRLSEMKTDFINNMTHEFKTP
                     ISTIALACEALKDTDIQKTELLYDNYVDVIDEENGRLSLMAEQILQTAIIDKGQLKLK
                     KSLINIHDIINVAAGSKKMEVESKGGIIELQLNALHPEVIGDNIHLTNVIINLLDNAI
                     KYCIKTPDIVVNTNNSGNTILIRIKDNGIGISKSNRKKIFEKLYRVPTGNIHNFKGFG
                     LGLSYVKTIAEQLEGSVIVESELGKGSTFTFQLPIN"
BASE COUNT          986 a          505 c          395 g         1009 t
ORIGIN      
        1 taaacgcatt ttcatagaaa ttttgcagag ccgaatttat attatttgta atttcaatta
       61 taccctggta taactcttta cccaaaaaaa agtgcaggaa gccatatgtt tcaactaaat
      121 aaggaaccca ataaaaatac cagataattg aaggtaataa actgaatatt gaagcggcaa
      181 caaatgcgat cttacgcttg aaaattactt caatacttag aattgggatt aaaaaaataa
      241 tcaataaata agcggagggt aattttgata aggttcctag tgctattaat acaccataat
      301 aaattaggtt taagaatcca cccgaacggg aatttttgtc aaaataatta gttccaaagt
      361 aaatacctgc caaaatgaat gacatggcaa aagtatctgg cataattttt ctagaataag
      421 taaaccaaat ggaaaatagt aaaattaagg ttgaagaaaa agcaatattc ctcatgaagt
      481 acttctcgat caatttgtaa aagaaaaata atccaagact tgaaataatt aagttaatta
      541 atctcccata ccagtgttga tacccaaaaa tttctgaaac caaataagtc agataattaa
      601 atagaggaaa ttccatgcct gtgatacctg ttttatttcc agcgatatca atccttggat
      661 aaaagatatt attgtcagtt tccaggaaat ttcttgaaac cattgtaaca gttgtctgtc
      721 tccaattatg tccaatttct aaaggcggat ttgttatacc aattagcctt ataaagaaga
      781 ataatataat ccaaaatcga atatcgcgaa aatagatttt aatcgtgtcc attaattgac
      841 aatgtttcta attctgaata ttatttgaaa aggaaataat aatagaacta tatctttaac
      901 ttcatcttaa ctcacaacaa gcttaaatcc cacaccgtgc acgttaatca attcaacact
      961 tgaatcctcc tttaaatact tccgtaattt tgtaatatac acatccatcg aacgtgcatt
     1021 gaaataactg tcatcgaacc aaattttatt tagggcaaca gtacggtcga gtacattatt
     1081 catattttca caaagtaact ttaataactc agcttcttta gatgtaagtt tctgctcttt
     1141 ttcatctaca attaataatt gtcgattata ctcaaaagta tattttccaa acttaaaaac
     1201 cgacttgctt ttttcgtcgg taacagaatt acttcttctc attattgcct ttatccgcaa
     1261 caacagttcc tccatgctaa atggtttggt aagataatca tcgccaccaa cttcaaaccc
     1321 atgaattctg tcttcttgca tagcctttgc agttaagaaa agaatcggaa tgtctttatc
     1381 aattttcctt attttcttag cgagagtaaa tccatccatt tcaggcatca tgatatccag
     1441 tatacaaaaa tcaaaattgc cccttttaaa tgtttcatag gctatttttc catccggaca
     1501 caaaaccgtt ggataacttt tggcttctaa atatgcttta agtacgttac caagattttt
     1561 gtcatcttct gctagcagca cgcgtgtatc ttttttcatg attttatgtt aatttattgg
     1621 caattgaaaa gtaaaagttg aaccttttcc aagttcggat tctacaatta cactaccttc
     1681 aagttgttca gctattgttt ttacataact tagtcccaaa ccaaagccct taaaattatg
     1741 aatatttccc gtaggaactc tataaagttt ttcaaatatc ttttttctgt tcgatttgct
     1801 gattcctatt ccattatcct taattcttat taatatggtg tttccgctgt tgtttgtatt
     1861 tactacaata tcaggagttt taatgcagta tttaattgcg ttatccaaca aattaataat
     1921 aacgtttgtt agatgaatat tatcaccaat aacttcagga tgtagtgcat tgagttgtaa
     1981 ttcaattatg ccacctttac tttcaacttc cattttttta ctgccagcag caacattaat
     2041 tatatcatgt atatttatca acgacttttt tagttttaac tgacccttgt cgataatagc
     2101 agtttgaagg atttgttccg ccattaagct gagacgaccg ttttcttcat caataacatc
     2161 tacataatta tcatataaca attcggtttt ttgaatatcg gtatccttta aggcttcgca
     2221 cgcaagtgca attgttgata ttggtgtttt aaactcatga gtcatattat taatgaagtc
     2281 ggttttcatt tcagaaagtc tcttttgcct atagattatg taaatactaa acgaaaaaga
     2341 aaatataata actaggaaaa gtataaccga cacaaacaat aatacccata actggctcat
     2401 aataaatatt ttctcatttg gaaaataaac cagcaacttg ttaggatatg agaaaagaga
     2461 tcctaatggt gttaggtcga aaataaaact ctcctttaat aaagcttccg gatacttacc
     2521 agttttttgc aggatcattg aatttgtagc cggactataa ataccaaact caaatttagt
     2581 gcttatctct ttctttttca atgctcgtgt tatcattgag tcgatacgaa ctttgtttga
     2641 ataataaaaa ttaccaggtt cttgttggtt gtaactcaaa gttaggtcgt tcaataactt
     2701 ttctgccata tcagagctaa gcacaaattg atcaatatca ctttgactgt tcatattatt
     2761 aaaattataa tacaacacct gattaaggga gtcataaact ctaaaaaagc ttttattttc
     2821 ttcaataaac tttcgtcgct ttttgatttt ttcttcaagc catagtttat caatctcaaa
     2881 tattaccgga ctaat
//
LOCUS       DASCQP010000145         1750 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000605454, whole genome shotgun sequence.
ACCESSION   DASCQP010000145 DASCQP010000000
VERSION     DASCQP010000145.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1750)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1750)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1750
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000605454"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            229..>1750
                     /locus_tag="QF480_02430"
     CDS             229..>1750
                     /locus_tag="QF480_02430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008774101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HJN05449.1"
                     /translation="MNVNAQTDSVVQKIIEIGTIDNQTMNHLDILCNRFGGRPIGSDA
                     YENAALWAANKFTEWGMEVEMDEVGELPVGFNRGPWFGRMLSDNGMNLHFATPSYTSG
                     TKGIQRGHVLIEPKTQAQFDRMKGRLKGAWVLITGENEGWPIDYSEKADSTRKTIIAK
                     NAETEKVNQKIRRENWKNRGTDEPKKELIELIEEPALFYKEMREAGILGIVQSSKVPI
                     RVMYDRKNIMNMTFETLPTVPDIKLDEHQYDIISQMAKERRYFELEFDIRNHFRLGPI
                     AYHNVIGIIPGTEFPDEYVIMSGHLDSYDVATGGVDDGSGVTPTMEAARLIMEAGGKP
                     KRTILAILWAGEEFGLLGSQSWVDRHKDELDKISNMVNRDGGPTVPTGISVSDSMRAD
                     FELICEPINSINPDFPFKINRREPREKPKRPWGTDSGPFAVEGVPTIGPQTGDPKGYD
                     FNYREIWHTERDLFNKSIKEYQEHTAIVTAIIVYGIANLDHLLPRDGYYVELPKEST"
BASE COUNT          641 a          289 c          371 g          449 t
ORIGIN      
        1 gtgccaattg agattgatca aatagagaaa ttaatgttta aataaaatta cttaactatt
       61 tttgagttcc tttgggtcgg ctttagtgaa ctttatggtt aaatcaattg tgagatttac
      121 ccaaaaagta accaaaagaa tgaaatttaa atatcaagta gaaacttaaa accagtcgca
      181 ttgaaaatca ctattacttt ttatttattg atcagcctaa cgctgataat gaatgtaaac
      241 gcacaaaccg attctgtggt acaaaaaatc atagaaatag gcactattga taatcaaacc
      301 atgaatcacc tggatatcct atgcaatcgt ttcggaggaa gaccaattgg atctgatgca
      361 tatgaaaatg cagcactatg ggcagcaaat aaatttacag aatgggggat ggaagttgag
      421 atggacgaag taggagaact cccggtagga tttaaccgag gaccttggtt tggcaggatg
      481 ctatctgaca atgggatgaa cctccacttc gcgacgccct cctatacgtc tggaaccaaa
      541 ggcattcaac gaggtcatgt tcttattgaa ccaaaaaccc aggctcaatt cgatagaatg
      601 aaaggaagat taaaaggggc atgggtatta ataaccggag aaaatgaagg atggccaatc
      661 gattattctg aaaaagctga cagtaccaga aaaactatta tcgctaaaaa tgcagaaact
      721 gaaaaagtaa accaaaagat tagaagagaa aactggaaaa acagaggaac cgatgagcca
      781 aaaaaagaac tgatagaatt aattgaagaa ccagcattat tctacaaaga aatgcgcgaa
      841 gcaggtattc tggggatagt tcaatccagt aaagttccta taagagttat gtacgacagg
      901 aagaatataa tgaatatgac atttgaaacc cttccgacgg ttcctgatat aaaactggac
      961 gagcatcaat atgacattat aagtcagatg gctaaagaaa gacgttattt tgaacttgag
     1021 tttgatattc gaaatcactt ccgcttaggg ccaatagcgt accacaacgt aattggaata
     1081 ataccaggaa cagaatttcc tgacgaatat gttatcatga gcggtcatct tgattcatat
     1141 gatgtagcca caggtggtgt agatgatgga tcaggggtca cacctacaat ggaagctgca
     1201 cgtttgataa tggaggctgg aggtaaacct aaacgaacaa ttcttgctat tctttgggca
     1261 ggagaagaat ttggattatt aggatcacaa agttgggttg accggcataa agatgaatta
     1321 gataaaatct caaatatggt aaatcgagat ggtggcccaa ccgtacccac aggaatttca
     1381 gtgagcgata gcatgagagc tgattttgaa ttaatttgtg agcctattaa ctcaattaat
     1441 cctgactttc catttaaaat aaacagaaga gaaccccgag aaaaaccaaa gagaccatgg
     1501 ggtactgata gtggtccatt tgcagttgaa ggggttccaa caattggccc acaaactgga
     1561 gatcctaaag gatatgattt taactatcgt gaaatatggc ataccgaaag agatttattc
     1621 aataagagca taaaagaata tcaggagcat acagcaattg taacagcaat aattgtttac
     1681 ggaattgcga accttgatca tcttctacct cgagatggtt attatgtaga acttccaaag
     1741 gaatctacaa
//
LOCUS       DASCQP010000146         2803 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000607753, whole genome shotgun sequence.
ACCESSION   DASCQP010000146 DASCQP010000000
VERSION     DASCQP010000146.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2803)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2803)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2803
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000607753"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..186
                     /locus_tag="QF480_02435"
     CDS             <1..186
                     /locus_tag="QF480_02435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05450.1"
                     /translation="IDDKQQERQKIQKEINELSKKRDKFVAEKRGEDSDNMLDKAILQ
                     AVKKQASAKNFEFADDK"
     gene            complement(254..1648)
                     /locus_tag="QF480_02440"
     CDS             complement(254..1648)
                     /locus_tag="QF480_02440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018710639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HJN05451.1"
                     /translation="MFKKEVYTERRNKLKGEIKSGIALFLGNEEAAFNYPANTYHFRQ
                     DSHFLYFFGLQNPGFAGVIDFDNDKDYIFGNDFDIDDIIWMGVQPKVTNLAASAGVEN
                     TPPYGELAEFITNVKSESRQIHFLPPYRGETIIELSSLLGLVNSDVKPAASIELIKGV
                     VKLKEIKSAEEIKDIEKAVDIAYEMHTTAMKMAKPGVVEQEIAGTIEGISLALGGPVS
                     FPIILSQDGQTLHNHYHGNVLEEGRMMVTDAGAETQECYSSDITRTVPVGGKFNDRQA
                     EIYQIVLDANMTAIEAIKPGLKYRDIHFLTAGVIVDGLKNASLMKGDTNAAVEAGAHT
                     LFMPHGLGHQMGMDVHDLESVGENYVGYDEETQRAEEFGTAYLILGKELKPGMVLTVE
                     PGIYFIPDLIDKFRNEGKYLDFINYDKVETYKGFGGIRIEDDVLVTETGHRVLGKPIP
                     KTIEEVEAVMSEGK"
     gene            complement(1727..2116)
                     /locus_tag="QF480_02445"
     CDS             complement(1727..2116)
                     /locus_tag="QF480_02445"
                     /inference="COORDINATES: protein motif:HMM:NF025420.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4249 family protein"
                     /protein_id="HJN05452.1"
                     /translation="MSISEDAFNFLNALKDQNIDQGNMYSRQPIQIKGNIRNVENINE
                     PVLGYFIVAGIEKKRIYLNRPALPFYYDICVPDFDLRFISFEPESFWPIYIDDIMFLG
                     WARGAPNSCFDCRLEGGSLTPPGFWID"
     gene            complement(2083..2718)
                     /locus_tag="QF480_02450"
     CDS             complement(2083..2718)
                     /locus_tag="QF480_02450"
                     /inference="COORDINATES: protein motif:HMM:NF025420.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4249 family protein"
                     /protein_id="HJN05453.1"
                     /translation="MSINKKAKFVQEGLKSNSAEVYITDENQLETSLTETESGTYLVL
                     DSSFSGHVGISYQLHVNLPDGRNYISDTCRLLPPSPIDSVYGLPESFNIENENKDLHG
                     IQFYIDFHNDLPDKYYQLWKLTQTFKYQATFEIDYTWEGAFFPFPKPDSLKTCWRSSK
                     INEIYVFSNKYLDGNKITRFPLVYVSTKAKDLSIRYSLLNSCRFQKMLLIF"
BASE COUNT          861 a          534 c          467 g          941 t
ORIGIN      
        1 attgatgata aacaacaaga gcgtcaaaag attcaaaagg aaatcaatga actatcaaaa
       61 aaacgagaca aatttgtagc tgaaaaacgt ggtgaagata gtgacaacat gcttgacaaa
      121 gcaatccttc aggctgtaaa aaaacaagct tctgcaaaga attttgagtt tgccgatgac
      181 aaataactta tcatttcatc gaaatgactt ttcatgaagt gaaaactcct gaaaggtcat
      241 tcaaatactt ttattattta ccttctgaca taacagcctc aacctcttca atagtttttg
      301 gaattggttt tccaagtaca cgatgaccag tttctgttac caatacatca tcttcaatcc
      361 tgatgcctcc aaagccttta tatgtttcca ctttatcata gttaataaag tcgaggtatt
      421 ttccttcgtt acggaatttg tcaattaggt cggggataaa ataaatgccg ggttccacag
      481 tgagtaccat acctggtttt agttctttac ctaatattaa ataagctgtt ccaaactctt
      541 cagctctttg ggtttcctca tcatatccaa cataattttc acccacgctt tcaaggtcat
      601 gaacatccat tcccatttgg tgaccaagtc cgtggggcat gaaaagagta tgtgcgccag
      661 cttcaaccgc ggcatttgtg tcacctttca tgaggctagc atttttcagt ccatcaacaa
      721 ttacaccggc tgttagaaaa tgaatgtcgc ggtatttcaa tccaggttta atagcctcaa
      781 tagcagtcat attagcatct aatactattt gataaatttc tgcctggcga tcgttaaact
      841 ttccacccac aggtactgtg cgtgttatat cactcgaata gcattcttgt gtttcagctc
      901 cagcatcggt caccatcatt ctcccttctt caagcacatt accatgataa tgattatgaa
      961 gtgtttgtcc atcctgactg agtataattg ggaaggaaac aggtcctccc aaggcaagag
     1021 aaataccttc tatggtacca gcaatttcct gttcaaccac tccgggctta gccattttca
     1081 ttgcagtagt gtgcatttca taggcaatat caactgcttt ctcgatatcc ttaatttctt
     1141 ctgcactttt tatttcttta agtttaacaa ctcctttgat tagttctatt gaagcagctg
     1201 gctttacatc agaattgact agcccaagta aggacgatag ttctataata gtttcccccc
     1261 gataaggtgg taaaaaatgg atttgcctgc tttcactttt tacatttgta atgaattctg
     1321 caagttcgcc atatggcggt gtattttcaa ctcctgcact tgcagcgaga ttagtaacct
     1381 ttggttgaac acccatccat ataatatcgt ctatatcgaa atcgttaccg aaaatataat
     1441 ccttatcatt atcaaagtcg attactcctg caaaaccagg gttctgtaat ccaaaaaaat
     1501 aaaggaaatg actatcctga cggaaatggt atgtgttagc agggtagtta aacgcagctt
     1561 cttcatttcc caaaaatagt gcaatacctg attttatttc gccttttaat ttatttcttc
     1621 tctctgtata aacctctttt ttaaacatgt ttataatttt aattgttatt tttttcgatt
     1681 ggtaaaatta tacgaatttc tattaagtta tatgtaagtc ttaaatttaa tctatccaaa
     1741 aacccggagg cgttaaagat cccccttcca aacggcaatc gaaacaacta tttggtgcac
     1801 ctctggccca tcctagaaac ataatatcgt cgatatagat aggccagaat gattcaggct
     1861 cgaaggaaat aaatctcaaa tcaaaatccg gcacgcatat gtcatagtaa aaaggtagcg
     1921 ctggtcgatt taaatagatt cgcttttttt ctatgccagc tacaataaaa taacccagta
     1981 cgggttcatt aatgttttca acattgcgta tatttccttt gatttgaata ggctgccgtg
     2041 agtacatatt gccttgatca atgttttggt cctttagcgc attcaaaaaa ttaaaagcat
     2101 cttctgaaat cgacaactgt ttaacaaact atatcttata cttaaatctt ttgcttttgt
     2161 tgatacatat actaatggaa aacgagtaat tttatttcca tcgaggtact tgtttgagaa
     2221 aacatagatt tcgttaattt ttgatgaacg ccagcatgtt tttagtgaat caggtttagg
     2281 aaatgggaag aatgcccctt cccatgtata gtcaatttca aatgtagcct gatatttaaa
     2341 cgtttgagtt aatttccaaa gttgataata tttatcaggt agatcattat ggaagtcaat
     2401 ataaaattga attccatgta aatctttatt ttcattttct atattaaagg attcaggaag
     2461 gccgtaaaca gaatctatag gagatggagg aagtaacctg caagtatcag atatatagtt
     2521 tcttccgtca ggaagattta cgtgtaattg ataggaaatt ccaacatgcc cggaaaagga
     2581 actatctaat accaaataag tgccagattc ggtttctgta agtgaagtct ccaattgatt
     2641 ttcatctgta atatatactt cagcactgtt tgacttcaaa ccctcttgga caaatttagc
     2701 ttttttattt atagacactt ttactttttt tgatgttgtt tcttgactgt tgaaatgttg
     2761 gtaacttcta gcgaagcgtt aaggaagtta tcaatatttc aat
//
LOCUS       DASCQP010000147         2806 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000607887, whole genome shotgun sequence.
ACCESSION   DASCQP010000147 DASCQP010000000
VERSION     DASCQP010000147.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2806)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2806)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2806
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000607887"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..492
                     /locus_tag="QF480_02455"
     CDS             <1..492
                     /locus_tag="QF480_02455"
                     /inference="COORDINATES: protein motif:HMM:NF024880.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HJN05454.1"
                     /translation="IGCGTGYITEGLVDKPVKIIAVDQSENMLNVMKNKFQDNSNISY
                     KLGTANELPIPSESVDFAFANMYLHHVDIPSEAIGEAFRILKKNGKFIITDLDKHNHS
                     FLLTEHHDKWMGFDRKKLESWYIDAGFKNVSIECAGESCKSNSTKDDAEADISVFIAI
                     GSK"
     gene            544..990
                     /locus_tag="QF480_02460"
     CDS             544..990
                     /locus_tag="QF480_02460"
                     /inference="COORDINATES: protein motif:HMM:NF024498.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF255 domain-containing protein"
                     /protein_id="HJN05455.1"
                     /translation="MKKLIAIFFTVFIAYSFGQAQEIEWYSWKDGYKIAKKENKKMLV
                     FVQTDWCHWCKRIEDKTFNNDEIFPTINNDFIAIKFNVEQKGTLKYEGKEYNAMELIS
                     KLSNNEFRGIPATLFFDSNTNDNALEVGFLTPEEMTPLLKKYSKEI"
     gene            1020..2237
                     /locus_tag="QF480_02465"
     CDS             1020..2237
                     /locus_tag="QF480_02465"
                     /inference="COORDINATES: protein motif:HMM:NF024753.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HJN05456.1"
                     /translation="MKFRYESYAIIYVFLFVFSGHTPANRHLIHIDISNGPTVELMSV
                     WPSNGPELSWEYKGIGNGYSSPALDSKSVFVTGEIDSIGYLFSFDLKGELNWKVAYGK
                     EWTKSYIGTRAAPTIIDNQIYVCSALGDIVCLEKTTGKISWSINMIQDLNGKNNVYGY
                     SMQLLIDQNVLYCLPGGRTVNIAALDRHTGNTIWTSKGLGETAGYANPILIDLPERKI
                     LVCYSEYSLLGVDATTGELLWSTELSLRGEIPCNTPIYEDGYLYSVGGPGNGALKHSI
                     SNDGTSIEEMWSNLSFDTFFGGFVKNENYLYGAMNRKRALASLNIKTGEIKSTVDLRN
                     GAIISADGLLYYYSEDGRIGLIDPNNGNLKLISSFRIKKGTREHFAHPVIHNGQLYIR
                     HGNDLLVYNIQKS"
     gene            complement(2265..>2806)
                     /locus_tag="QF480_02470"
     CDS             complement(2265..>2806)
                     /locus_tag="QF480_02470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05457.1"
                     /translation="RSGEFFEFNVQHIFDKPTEGFELVDSVYIPAGRYWDNRLEIQFS
                     TFRGRKISGEVEVSAGEFYTGHRQEIEVNIYYNLNKHLNIGIDWQTNYLQLPQKSFTT
                     NELGGRIDYAFNPKLATNIYAQWNNEDQNVLINYRINWIPKIGSYFYFVINQEFDTSN
                     GIKVKRTTILGKLIWRFAL"
BASE COUNT          969 a          431 c          525 g          881 t
ORIGIN      
        1 ataggttgtg gtacaggtta tataacggag ggattagtag ataaacctgt aaaaataatt
       61 gctgtcgacc agtcggaaaa catgttgaac gttatgaaaa acaagttcca agacaatagt
      121 aatatcagtt ataaacttgg tactgcaaat gaattaccaa ttccttctga atcagtagac
      181 tttgcctttg caaatatgta tttgcatcat gtagacattc catcagaagc aataggtgaa
      241 gccttccgaa ttcttaagaa gaatgggaaa ttcataatta cggatttaga taaacacaat
      301 cattcttttc tgttaacaga acatcacgat aagtggatgg gttttgatag aaaaaaactt
      361 gagagttggt atatagacgc tggtttcaaa aatgtatcta tcgaatgtgc aggagaatca
      421 tgcaaatcga attcgacaaa agacgatgct gaagctgaca ttagtgtatt tattgcaata
      481 gggagtaaat aatttgacta actaattaac aattaatatg aatcgcaact aaaaattaaa
      541 atcatgaaaa aattaatcgc aatctttttt actgtattta ttgcctattc attcgggcaa
      601 gctcaagaaa tagaatggta ctcatggaaa gatgggtata aaatagcaaa aaaggaaaat
      661 aagaaaatgc ttgtctttgt tcagaccgat tggtgtcatt ggtgtaaacg tatagaagac
      721 aaaaccttta ataatgatga aatcttccca accattaata atgatttcat agcaataaaa
      781 tttaacgttg agcaaaaagg aactcttaaa tatgagggta aagaatacaa tgcaatggaa
      841 ttaattagta aactttcaaa taatgagttt agaggtattc ctgcaacatt attctttgat
      901 agtaatacaa atgataatgc cttggaagtg ggcttcttaa cacctgagga aatgactcct
      961 ttacttaaga aatattcaaa agagatctaa aattatattg tgtacctgat tgagatatta
     1021 tgaaatttcg atatgaaagt tatgctataa tatatgtatt cttatttgta ttttcaggtc
     1081 atacaccggc caacaggcat ctaattcaca tagatatatc gaatggtcca acagtggaat
     1141 tgatgtctgt atggccttct aatggccctg aattatcatg ggaatataaa ggaattggaa
     1201 atggctacag ttctccggca cttgattcta aatctgtttt tgttacagga gaaatcgata
     1261 gcattggcta tttattttct tttgatctaa aaggtgagct aaactggaaa gtagcttatg
     1321 gtaaagagtg gactaaaagt tacattggta caagagcagc cccaacaata attgataatc
     1381 agatttatgt gtgctcagct ttgggcgata ttgtatgttt agagaaaacc actggaaaaa
     1441 tatcgtggtc aataaatatg attcaagatt taaacggaaa gaataatgtt tatggatatt
     1501 caatgcaact tcttatcgat caaaatgtac tttattgctt accaggagga agaactgtaa
     1561 atattgcggc attagaccgc catacaggaa ataccatctg gacttccaag ggacttggcg
     1621 agaccgccgg ttatgctaat ccgattctaa tagacctgcc agaacgaaaa atactggttt
     1681 gttattccga atattcgtta ttgggtgtag atgctactac aggagaatta ctgtggtcta
     1741 ccgaattatc cctaaggggt gaaataccat gcaatactcc aatatatgaa gatggatatt
     1801 tatattcagt tggtggtcct ggtaatggag ctttaaagca tagtatatca aatgatggga
     1861 caagcattga agagatgtgg tctaaccttt catttgatac attttttggt ggatttgtta
     1921 aaaatgagaa ctatttatat ggagctatga atagaaagag agccttagct agtttaaata
     1981 taaaaacagg agaaataaaa agtacggtgg acttaagaaa tggggcaata atttctgccg
     2041 atggattgct ttattattac agcgaagatg ggcgaattgg attgatagac ccaaataatg
     2101 gaaatttaaa attgataagc tcatttagaa taaagaaagg cacaagggaa cattttgctc
     2161 atccggtaat tcataatggc caactataca tccgacatgg taatgacttg ttagtttata
     2221 atattcaaaa gtcttgaatc taattattca tggttgaatt atccttataa agcaaatctc
     2281 cagataagtt taccaagaat ggttgtacgc tttaccttta tgccattact ggtatcgaac
     2341 tcctggttga taacaaaata aaagtaactt ccaatctttg ggatccagtt tattctataa
     2401 ttgatcagca cattctggtc ttcattattc cattgagcgt aaatgtttgt cgctaatttc
     2461 ggattaaatg catagtcgat acgccctcct aattcattag ttgtgaatga cttttgtggt
     2521 agctgtaaat aatttgtttg ccaatcgatt ccaatattta aatgcttatt gagattatag
     2581 tagatattta cctcaatttc ttgccgatgt ccggtgtaaa attcacctgc gcttacctcc
     2641 acctctcctg aaattttccg tcctctaaaa gtactaaact gtatttctaa ccgattgtcc
     2701 cagtatctac cagccggaat atacacacta tcaacaagct caaaaccttc ggtaggttta
     2761 tcgaaaatat gttgaacgtt aaattcaaag aactcaccac ttcttg
//
LOCUS       DASCQP010000148         1509 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000607902, whole genome shotgun sequence.
ACCESSION   DASCQP010000148 DASCQP010000000
VERSION     DASCQP010000148.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1509)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1509)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1509
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000607902"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..523)
                     /locus_tag="QF480_02475"
     CDS             complement(<1..523)
                     /locus_tag="QF480_02475"
                     /inference="COORDINATES: protein motif:HMM:NF012515.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HJN05458.1"
                     /translation="MAKILGIGNALVDVLTQLENDHLLSELELPKGSMQLVDAEKSEK
                     IQKQSKNLKKQLTSGGSAANTIHGLAKLGIQTAFIGTVGEDETGNFFHNDLVNNNITP
                     QLTISKSPSGISNAMISKDGERTFGTFLGAAIELSESHINDNQFTDYDILHVEGYLVQ
                     NHILLEAILTTAKN"
     gene            complement(552..1424)
                     /locus_tag="QF480_02480"
     CDS             complement(552..1424)
                     /locus_tag="QF480_02480"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN05459.1"
                     /translation="MSINKKAKFVQEGLKSNTFQIFDTTTILLTGTTNDGCTLTDSVK
                     FYTKPPPEVSFSGLLPVYCENDTWSQLTGTPIYGIFYGPGVVGDKFYPQSAGPGTHDI
                     IYAYVNTESCTGYDTNTTIIYENGGSIDLGPNFTILPQDTAILDAGPGFDSYFWTTGA
                     TSQSIVVYGDEKSPGIYKYAVMGVINGCSTGGNVFITFENPDGYNEQHINGLTIFPNP
                     NDGSFTIKFSSLEKNIDLNILNLHGKILYEKNNVSCNEECKIDIQLNSLESGIYFLRI
                     TTPKGVSTAKIVVN"
BASE COUNT          451 a          262 c          266 g          530 t
ORIGIN      
        1 tatttttggc ggttgtcaaa atggcttcca gcagaatatg attttgaact aaatagcctt
       61 caacatgtaa aatatcataa tcggtaaatt ggttatcgtt aatatgagat tcagaaagtt
      121 caatagcggc acctagaaaa gtgccaaaag tgcgttctcc atctttactt atcattgcat
      181 ttgatatacc tgatggggac ttacttattg taagttgtgg ggtgatattg ttattgacca
      241 aatcgttatg aaagaaattt ccggtttcat cttcgcctac tgttccaatg aaggctgttt
      301 ggattcccaa tttcgccaga ccatgtattg tattggctgc tgaaccacca gatgttaact
      361 gcttttttaa atttttactt tgtttttgaa tcttttctga tttttctgca tcaacaagtt
      421 gcatgcttcc ttttgggagc tcaagttcag atagcaagtg atcattttca agttgggtca
      481 gcacatcaac caatgcgtta ccaattccta atatttttgc catgttaaaa agtttgtggc
      541 aaatgtaaaa attaattcac aacaatttta gctgtactca ctcctttagg agttgtaata
      601 cggagaaagt aaatgccaga ttcaaggcta ttcagctgaa tatcaatttt gcattcttcg
      661 ttgcacgaaa cgttattttt ctcatacaat attttgccat gtagatttaa aatatttaaa
      721 tcgatatttt tttcaagact gctaaattta atagtgaagc ttccatcatt tggattaggg
      781 aatattgtta atccattaat atgttgctcg ttataaccat caggattttc gaaagttata
      841 aatacattcc ctcctgttga acagccatta attactccca taactgcata tttatatatt
      901 cctggtgatt tttcatcacc ataaaccaca atactttgtg atgtagcacc tgtggtccaa
      961 aaataactat cgaagccggg gcctgcatca aggattgcag tatcttgtgg gagaatagta
     1021 aaatttggac caagatcaat ggagccacca ttttcataaa taatagtagt gttagtatcg
     1081 taaccagtac aactttcagt attaacgtag gcatatatta tatcatgagt acctggcccg
     1141 gcactttgcg gatagaattt gtcacctaca actccaggtc cgtagaaaat cccataaatg
     1201 ggtgtacctg taagttggga ccaagtatcg ttttcacaat aaactggtaa taaacccgag
     1261 aagctcacct ctggtggtgg tttagtataa aattttacac tatcagttaa agtacagccg
     1321 tcattggtag ttcctgttag caaaatagta gtagtatcaa atatttgaaa tgtgtttgac
     1381 ttcaaaccct cttggacaaa tttagctttt ttatttatag acacttttac tttttttgat
     1441 gttgtttctt gactgttgaa atgttggtaa cttctagcga agcgttaagg aagttatcaa
     1501 tatttcaat
//
LOCUS       DASCQP010000149         5816 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000610214, whole genome shotgun sequence.
ACCESSION   DASCQP010000149 DASCQP010000000
VERSION     DASCQP010000149.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 5816)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5816)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5816
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000610214"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(105..785)
                     /locus_tag="QF480_02485"
     CDS             complement(105..785)
                     /locus_tag="QF480_02485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05460.1"
                     /translation="MKRLLLLMFLTTLLTSFSIAQHQKTDRANAHLNGKVKSIRETTY
                     STSNKSKDASTGTIISDKYTLFNDEGNKQKISIYKEGILFSYIVNYYNQNNVTTSSTE
                     YNADNSPYLTIIYKCNDKGIITEAIYNRILQKAYDDERFSIDVEYDRFYQNLFTSVTF
                     TTDFIGNILEEKYFTQKGNLSFKIMNKYDYKYNKVEVKYYNNSGNVSWRKKLKYDLCL
                     TSNPLGQI"
     gene            complement(820..3507)
                     /locus_tag="QF480_02490"
     CDS             complement(820..3507)
                     /locus_tag="QF480_02490"
                     /inference="COORDINATES: protein motif:HMM:NF040057.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative LPS assembly protein LptD"
                     /protein_id="HJN05461.1"
                     /translation="MTNNSIIKLLARLWLLFICLIPIGLNAGTIQSVFEKTPDTLIQT
                     KLDSLAIISADTVLYSDTIIVDTIITTSISGDTVIDEAIGRTKFDSKVERYAIDSIVQ
                     DIANRKIFLFGEAVINYEDITLKANYIEVDLNTNTVFASGIKDSTGKLRGLPEFTQGD
                     QTFKSNTMTYNFDSKKGFISNVLTEDGNGFLHGTTVKKLDDNTINILHGEYTTCNLEE
                     DPHFGFKFKKSRVIPDSKIVTGPAYMEIEGMPTPLGLPFGFFPNKSGQTSGIRIPTYG
                     EYTNRGFFLENGGYYWAINDYMDLDLLGDIYSRGGWAIKPRFRYKKRYKFSGDFNLGY
                     AVNIVGTKGAPDYSKSTDFKIRWSHRQDPKARPNSTFSADVNIVSGNYVKYNVVSTQA
                     FLSNEFQSSVAYQKNWNSKYFLTLNASHSQNTKTHIVNVSLPEMTFTVNRFYPLRGKS
                     KKKRFYEDLSVSYTMNLRNTISTTDSVLFDKVTLEQNMQAGASHKIPISLPIKVLKYF
                     TLSNSINFTDRMYSRSIRKYWENDTTIVAGDTLDPGERIDTVPGFRNSYNYSISSSLS
                     TKLFGIVAFKKGPLRAIRHVLTPSVSFSYTPDFGAAKYGYYGTYVDGDGREISYSHFE
                     GSLYGSPPGQKSGRIGISLGNNLEIKVPSRKDTITGLRKIKLIESFSISGNYDLSRDS
                     LNMSMITMSGRTTLWKNLNIQYGSVWDPYAADSAGSRINKYEWDVNRRLLRLDNTSWR
                     LSFGFELGDKDFNKEKKPENATDDEMNEIESNPDDYVNWNIPWSLNFNYNFTYTNNLD
                     YINYIKVPTETIVQTLSFAGQINITPKWKFTFNSGWDFTQNKLSYTSINLYRDLHCWE
                     MRFSWIPLGVRQSWNFSINVKASILQDLKLNKKKDFRDY"
     gene            complement(3936..5204)
                     /locus_tag="QF480_02495"
     CDS             complement(3936..5204)
                     /locus_tag="QF480_02495"
                     /inference="COORDINATES: protein motif:HMM:NF013741.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HJN05462.1"
                     /translation="MNTNGLIIIISLLLSGFFSGMEIAFVSSNRLMQELDLKRKVIPA
                     RILSAFYNNPSRFIGALLLGNNIALVIYGIATVKLMEPVITSLLPSSLSSEYLILLIQ
                     TIVSTLLILIVAEFIPKVLFRINPNSILKLFALPVWIFYYVFYPLIMIYLGISEIILK
                     SIFRVKLASNSYSFSAIDLQEYVKGSISDTETTEEINQEIQMIQNAIEFKHVKLRDCM
                     VPRTEIKALEINKEIDEFRKLLVETGHSKIFIYQESIDHIVGYIHVFDLFNHPTSIKD
                     IIRKIDPYPETTTAKDLLKNFIENHKSIAVVLDEFGGTAGIVTMEDVIEEIFGEIEDE
                     HDKGDDVEKQISEKSFLFSTRLEIDYLNEKYKFNIPVLDDYETLAGFILYNHKSIPAI
                     NQKIIISQYTFTILKSSGNRLNEVKMEVEE"
     gene            complement(5240..>5816)
                     /gene="lptC"
                     /locus_tag="QF480_02500"
     CDS             complement(5240..>5816)
                     /gene="lptC"
                     /locus_tag="QF480_02500"
                     /inference="COORDINATES: protein motif:HMM:TIGR04409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HJN05463.1"
                     /translation="NIMFSYLKKGIIMAIAVMVLFSCENSISKIVEITKEDTLAAVST
                     YDIVYERSDSGYVQVKLVSSLMKRFGGKDPYDEFPEGFEITFFDNTGKETSNIKANYG
                     IAYSKRKYMNARNDVVIKNFETDEQLYTENLIWDQRMKIIKSNTFVKLIMPDKTIFGD
                     SMWANEAFSEHEIYNVKGEFDIEDDTVTRSE"
BASE COUNT         1843 a         1005 c          894 g         2074 t
ORIGIN      
        1 attgaaatat tgataacttc cttaacgctt cgctagaagt taccaacatt tcaacagtca
       61 agaaacaaca tcaaaaaaag taaaagtgtc tataaataaa aaagctaaat ttgtccaaga
      121 gggtttgaag tcaaacacaa gtcatattta agtttttttc tccacgatac attaccgcta
      181 ttattgtaat actttacttc aactttatta tatttataat catatttatt catgatttta
      241 aatgataaat tgcctttttg agtgaaatac ttttcttcca agatatttcc aataaagtcg
      301 gtggtgaatg taacacttgt aaacagattt tggtaaaatc tatcatattc aacatctatt
      361 gaaaaccgct catcatcgta ggctttttgt aatattctat tatagattgc ctctgttatt
      421 attcccttat cattgcattt gtatataatt gttaaatagg gactattgtc agcattatat
      481 tcagtgctac tcgtagtaac attattttga ttgtaataat tgactatata tgaaaacaaa
      541 ataccttctt tatatataga aatcttttgt ttattacctt cgtcgttaaa caaagtatac
      601 ttgtcagaaa taatggttcc tgtactagcg tcttttgatt tgtttgatgt cgaatatgtt
      661 gtttctcgta ttgacttaac ttttccatta agatgcgcgt ttgccctatc agttttttgg
      721 tgttgggcaa tggaaaaact agttagtaat gtggttagaa acatcaataa taacaacctc
      781 ttcattttgc ttgttttaaa aaaggatgtt gtaaaattac taataatctc tgaaatcctt
      841 tttcttgtta agttttaaat cctgaagtat agaggctttc acatttattg agaaattcca
      901 gctttgcctt actccaaggg gtatccaact gaaacgcatc tcccagcaat gcaaatcacg
      961 gtataaatta atggaagtgt atgatagttt gttttgggta aaatcccatc ctgaattaaa
     1021 tgtgaatttc cattttggtg ttatgtttat ctgacctgca aatgaaagag tttgcacaat
     1081 agtttcagta ggaaccttaa tataattgat gtaatcaaga ttgtttgtgt atgtaaaatt
     1141 gtaattgaaa tttaacgacc acggtatatt ccagtttaca taatcatcag ggttgctttc
     1201 aatctcattc atttcatcgt cagtagcatt ttctggtttt ttctccttat taaaatcttt
     1261 gtcaccaagt tcgaaaccaa aactcaatcg ccaggaagta ttatctaatc ttagcaacct
     1321 tcgatttaca tcccattcgt acttattaat cctactccca gcagaatcgg cagcatatgg
     1381 atcccaaaca gaaccatatt gaatatttaa atttttccac agtgtggttc ttcccgacat
     1441 tgtgatcatc gacatattta aagagtctct tgatagatcg taattgcctg aaatgctgaa
     1501 gctttcaatg agtttaattt tccttaatcc ggtaattgtg tcttttctgg aaggtacttt
     1561 tatctcaaga ttatttccaa gagaaattcc aatcctaccc gatttttgtc cgggtggtga
     1621 tccatatagg cttccctcaa aatgagaata actaatctct cttccatcac cgtcaacata
     1681 agttccataa tatccatatt ttgcagctcc aaaatcggga gtgtacgaaa aactaacact
     1741 aggtgtaagc acgtgtcgta ttgccctgag gggtcctttt ttaaaggcga cgatcccaaa
     1801 aagttttgtt gataatgagc tcgatatgct atagttataa gaatttctaa acccaggaac
     1861 agtatcaatt ctttcacccg gatccaatgt gtcgccagca acaattgttg tgtcgttttc
     1921 ccaatatttt cggatactcc tgctgtacat tctgtcggta aaatttatag aattgcttag
     1981 ggtaaaatac tttaacactt taattggtaa actaattgga attttatgac tggcaccggc
     2041 ctgcatattc tgctcaagtg taactttatc gaacaacacc gagtcggttg tgctaattgt
     2101 atttcttaag ttcatagtat aagaaacact caaatcttca taaaatcgct ttttcttact
     2161 ttttcccctc aagggataaa acctattaac cgtaaaagtc atttctggta ggctaacatt
     2221 tacaatgtgt gttttagtgt tttgactatg acttgcatta agcgtgagaa aatatttact
     2281 attccagttt ttttgataag caacacttga ttgaaactca tttgataaaa aagcctgtgt
     2341 tgatacaaca ttatatttta cataattacc acttactata ttaacgtccg ctgaaaaagt
     2401 gctatttgga cgagcctttg gatcctgtcg gtgagaccat ctgattttaa aatctgtact
     2461 tttcgaataa tcaggcgcac cttttgttcc aacaatgttt actgcataac ctaggttaaa
     2521 atcaccgctg aacttatatc gttttttata cctgaaccgt ggttttattg cccagccacc
     2581 tcttgagtat atatcgccca ataggtctaa gtccatataa tcgttaattg cccagtaata
     2641 tccaccattt tcaagaaaga atcctctgtt cgtatattct ccataagtag gaattcttat
     2701 acctgatgtc tgtcctgatt tattagggaa gaaaccaaaa ggaagaccca acggagttgg
     2761 cattccttct atttccatat aagctggtcc ggttactatt tttgagtcgg gtataacacg
     2821 tgatttttta aatttaaagc caaaatgcgg atcctcttcc aggttacatg ttgtatattc
     2881 tccatgaaga atattaatag tattgtcatc aagttttttt acagtagttc catgcaagaa
     2941 tccatttccg tcttcagtta acacatttga tatgaatcct ttttttgagt caaagttata
     3001 cgtcatcgta ttcgacttaa atgtttggtc gccctgtgta aattcgggca atccccttaa
     3061 ctttcctgtt gagtctttta tgcctgaagc aaaaacggta tttgtattta ggtcaacttc
     3121 tatatagttg gctttgagag taatgtcttc ataattaatc acagcttctc caaacaaaaa
     3181 tatttttcta ttagcaatat cctgaacaat agaatctatg gcataccttt caactttcga
     3241 atcaaatttt gtacgaccga tagcctcatc aattacagta tctcctgata tacttgttgt
     3301 aattatagta tccactatta tagtatcgga atacagtact gtgtcagcag atattattgc
     3361 tagtgaatca agtttggttt gaattaatgt atcaggagtt ttttcaaaaa cagattgaat
     3421 tgttccggca tttaacccaa ttggaataag gcaaataaat aacaaccaaa gtctggctaa
     3481 taatttaatg atagaattat ttgtcaacaa aattgtttta tttacaataa atatttaatg
     3541 ccttgagttc gagataccaa atcgtagata gttatagatc cttattagtt catttaatag
     3601 tgatagtatt taatcgcaat tgccaaaatt aactgtattt tcttataatc tatcttgtcc
     3661 aaatcagtta gtctgtttgc aatttaacaa ctttaacact cctttttaaa gggattttat
     3721 gtgctgatat ataataaaaa tatatgcaaa tataattcca aaaattagaa gctttacagc
     3781 tatgtaataa tttgattatt aaaaggttta acgtatttga tttcaacata ttgcagtaat
     3841 tacaaaactc tgatacatat caaatagcaa acatcgagat ttgcatgaaa tttattgtta
     3901 ttgagaagaa gtaacacgat ggagaatgaa agaaactact cttctacttc catttttact
     3961 tcattaaggc gattgccact ggatttcagt attgtaaatg tatattgact aatgattatt
     4021 ttttgattaa tagctggaat acttttatga ttgtatagta taaaaccggc gagtgtttca
     4081 taatcatcaa gtacaggaat attaaattta tatttctcgt ttaggtagtc aatttcgaga
     4141 cgggttgaaa aaagaaaaga cttttcagat atttgctttt ccacatcatc acccttatca
     4201 tgctcatctt caatttcacc aaatatttct tcaattacat cctccattgt aactataccg
     4261 gcagtacctc caaattcatc taatacaacg gcaatacttt tatgattttc gataaagttc
     4321 tttaatagat ctttagctgt ggttgtttct gggtatggat caattttcct aataatatct
     4381 ttgattgaag ttgggtggtt aaataagtca aacacatgaa tatatcctac tatatgatca
     4441 attgattctt ggtaaatgaa aatttttgaa tgacccgttt caaccagtaa tttcctaaat
     4501 tcatcaattt ctttattaat ctccagagct ttgatttcgg tacgtggaac catgcaatca
     4561 cgcaatttaa catgcttaaa ctcaattgca ttttgaatca tctgaatttc ctggttaatc
     4621 tcttcagtag tttcggtatc ggagatggaa ccctttacat attcttgaag atcaattgcg
     4681 ctaaacgaat atgaattgct agccagtttt acccgaaaga tacttttaag tataatttct
     4741 gaaatgccca aataaatcat tatcaacggg taaaagacat aataaaatat ccatacagga
     4801 agggcaaaca atttaagtat tgaattcgga tttattctga atagcacttt gggaataaac
     4861 tcagcaacga ttaatatcag tagagttgag acaattgttt gaattagtag tattaaatat
     4921 tcagatgata aagagcttgg cagaaggcta gtaattaccg gttccattaa ttttactgtg
     4981 gcaattccat atataacaag ggctatattg tttcccagaa gtaaagctcc tataaatcga
     5041 gaagggttat tataaaacgc ggaaaggata cgtgcaggaa taacttttcg ttttaaatcc
     5101 agctcttgca taagcctgtt tgagcttaca aatgcaattt ccatccctga gaagaaaccg
     5161 gaaagaagaa gcgaaattat tataatcagc ccgttagtat tcatggtaaa gtaaagaatc
     5221 aaaaatagta ataaaatgtt tattccgaac gggttactgt atcgtcttca atatcgaatt
     5281 cacctttaac attatatatc tcatgctcac taaaggcttc attagcccac atactatctc
     5341 caaaaattgt tttgtcgggc ataattaatt ttacaaatgt atttgattta attattttca
     5401 ttctctggtc ccagattaga ttttcggtgt aaagttgttc atcggtctca aaatttttta
     5461 tcaccacatc attacgcgca ttcatgtatt tccgttttga ataagcaata ccataattgg
     5521 ctttaatgtt tgatgtttct tttccggtgt tatcgaaaaa agtaatttca aaaccttctg
     5581 ggaattcgtc ataaggatct tttccgccga accgtttcat taaagagctc accaatttaa
     5641 cttgtacata tcctgagtca gacctttcat acactatatc ataagttgat acggctgcaa
     5701 gtgtatcctc cttagttatc tcaactattt ttgaaatgga attctcacaa gaaaaaagca
     5761 ccattactgc tattgccata atgatgcctt ttttcaaata ggaaaacata atattt
//
LOCUS       DASCQP010000150         2546 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000610385, whole genome shotgun sequence.
ACCESSION   DASCQP010000150 DASCQP010000000
VERSION     DASCQP010000150.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2546)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2546)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2546
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000610385"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..881
                     /locus_tag="QF480_02505"
     CDS             <1..881
                     /locus_tag="QF480_02505"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN05464.1"
                     /translation="IHHPQGDLKMISTYENPLVSTKYDNQNEDPDGKYWKVNWNETVS
                     GHGVTEGGSSGSPIFNNKGNIIGSLTGGSASCTSENAPDYYGKFSFSWESYGQDSTSQ
                     LKYWLDPLMTGVTILKGTNLDSTNIFAGFSVETEKITIGESLSFINTSFGNISGYNWY
                     FEEGNPESSELENPGSIKYDNAGIYDVRLIVTSTDKIDTLTRVGYIRVLPNISPNPTN
                     GKIKLAFGNKIPDDYSIRVFDATGRETGYWNIEKGENYLNIDLRPKIQGIYFINYSAA
                     GINNNYKVVVVGEIVD"
     gene            complement(911..1960)
                     /locus_tag="QF480_02510"
     CDS             complement(911..1960)
                     /locus_tag="QF480_02510"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009133962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HJN05465.1"
                     /translation="MNAEGVDGKVEESFELYEHHNIVVDSGQAPLRIDKFLFNKIVNV
                     TRNKIQQAAKAGNIVVKGVPVKSNYKVKPLDEISVLMTYPPRDVEILPEDIPINIVYE
                     DEDLILINKQAGLVVHPGYANYTGTLLNGLAHYFAKTGQTNVENGFGYLVHRIDKDTT
                     GLLLVTKNELAQTKLAKQFFDHTVDREYEALVWRDVENDEGIIEGNIGRSLKDRRVMT
                     VFPDGEYGKEAVSHYKVLRRFGYVTLIQCKLETGRTHQIRAHLNYLGHPLFNDERYGG
                     NKILKGTTFSKYKQFVQNCFKIISRQALHARSLGFIHPTTNKKLHFESNLPSDFINVL
                     DKWDGYTSNRPDGDE"
     gene            complement(1960..>2546)
                     /locus_tag="QF480_02515"
     CDS             complement(1960..>2546)
                     /locus_tag="QF480_02515"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN05466.1"
                     /translation="FLFDLLVWSDNNGRPGEVIYRLDNQKVKWENGLYRFYPYMLSEP
                     LTMAGVFYVGWEKHDPDNMNIGMDANNNKQDKIFYKTELDWFNASVPGALLIRPIVGS
                     NLVLSTNELFPVNDNSSMKVFPNPTSQYFSISNQEIDNDPNAKLKIYNVYGLEMLNKT
                     GVDSKVNISGFPAGIYIVRVVSKNKHYTAKLLIK"
BASE COUNT          812 a          467 c          430 g          837 t
ORIGIN      
        1 caatacatca ccctcaggga gacctaaaga tgatatcaac ttatgaaaat cctttagtat
       61 ccactaaata tgacaatcaa aatgaagatc cagatggaaa gtattggaaa gtaaactgga
      121 atgaaactgt aagcgggcat ggggttactg aaggggggtc atcaggtagc cctattttta
      181 ataacaaagg taatataatt ggttctttaa caggtggtag tgcttcatgc acatctgaaa
      241 atgccccgga ttattatggt aaatttagtt tttcttggga atcatatggt caggattcaa
      301 catcacagct taaatattgg ctagacccac ttatgactgg tgttacaatt ttaaaaggga
      361 ctaaccttga ttctacgaat atctttgcag ggttttcagt tgaaacagaa aaaattacca
      421 ttggtgaatc tttatcattc ataaacacat catttggtaa cattagtgga tataattggt
      481 attttgagga aggtaatcca gagagctctg aacttgaaaa tcctggatca attaaatacg
      541 ataatgctgg catatatgat gttcgtttga ttgtaacctc aactgataaa atagacacac
      601 ttacaagggt tgggtatatt agagtactac caaatatttc tcctaaccca actaatggaa
      661 aaattaaatt ggcttttggc aacaagatac ctgatgatta ctcaatcaga gtctttgatg
      721 caactggcag agaaacagga tattggaata ttgaaaaagg tgagaactat ttgaatattg
      781 acttgagacc caaaattcaa ggaatatatt ttatcaacta ttctgcggca ggcattaata
      841 ataattataa agtagtcgta gttggtgaga tagttgatta atatctttgc catattcctc
      901 aatggctaat ttactcatca ccatcaggac ggtttgaagt atacccatcc catttgtcaa
      961 gcacattaat aaaatctgat ggcaagtttg attcaaaatg caacttctta tttgtagtag
     1021 gatggataaa tccaagtgaa cgagcatgta atgcctgtcg acttataatc ttaaagcaat
     1081 tttgaacgaa ctgtttgtat ttagaaaaag ttgttccttt tagtatctta ttaccaccat
     1141 atcgttcatc attaaaaaga ggatgtccaa gataattaag gtgtgctcta atttgatgtg
     1201 tacgacctgt ttcgagttta cattgtatga gcgtaacgta gccaaatcgt ctcaaaactt
     1261 tataatgcga aacagcttcc ttgccatatt ctccatctgg aaagacagtc ataacccttc
     1321 gatcttttag actacgtccg atattaccct ctattatacc ctcatcattt tccacatccc
     1381 gccatactaa tgcttcatat tccctgtcaa ctgtatgatc gaaaaattgc tttgcaagtt
     1441 ttgtttgggc aagttcgttt ttggtaacca aaagaagtcc ggtagtatcc ttatcaatac
     1501 gatgaacaag gtaaccaaat ccgttttcaa cattagtttg cccggtttta gcaaaataat
     1561 gagcgagtcc gtttaataat gtacctgtat agtttgcata accaggatgc acaaccaaac
     1621 cagcttgctt gttaatcagt ataaggtcct catcttcata tacaatgttg attggaatat
     1681 cttctggcaa tatttccaca tcccttggag gataggtcat taataccgag atctcatcaa
     1741 gtggttttac tttgtaattt gatttaacag gaacaccctt aacaactata ttgccggcct
     1801 tagcggcttg ctggatctta ttacgtgtta catttacaat cttgttaaac agaaatttat
     1861 caattcttaa aggtgcctgg cctgagtcga caacaatatt atgatgttcg tataactcga
     1921 aactttcttc aacttttcca tctacacctt cggcattcat cacttaatta ataatttggc
     1981 tgtgtaatgt ttgtttttac taactactct tacaatgtag ataccagcag gaaaaccgct
     2041 aatatttacc tttgaatcta ctcctgtctt attaagcatc tcaagtccat acacattata
     2101 gatttttaat ttagcattcg ggtcattatc aatttcttga tttgaaattg aaaaatattg
     2161 agatgtcggg tttggaaaaa ctttcatgct gctattatca tttacaggaa ataattcatt
     2221 tgttgaaagc actaaatttg atccaacaat aggtctaatc aacaatgctc caggaacgga
     2281 ggcattaaac caatcaagct ctgttttata gaatattttg tcctgcttat tattattggc
     2341 atccatacca atattcatgt tatcaggatc atgcttttcc caacctacat agaaaacacc
     2401 tgccattgtt aacggttcac ttagcatata gggataaaat cgatagagac cattttccca
     2461 tttcactttt tggttgtcta acctgtaaat cacttctccg ggtctgccat tgttatcact
     2521 ccaaactaac aagtcgaaca aaaatt
//
LOCUS       DASCQP010000151         3962 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000619692, whole genome shotgun sequence.
ACCESSION   DASCQP010000151 DASCQP010000000
VERSION     DASCQP010000151.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3962)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3962)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3962
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000619692"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..803
                     /locus_tag="QF480_02520"
     CDS             <1..803
                     /locus_tag="QF480_02520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05467.1"
                     /translation="ANKHLVNIIDFVVSNDTVDFWLLQEVDVRSKRSYYLNEVELLTT
                     AKSGSNSVFAKNYSVPFVPVPVTNPMGYVQSGILMFSDFPPVEAIRYAYPLIASWPDK
                     LFLLDRCFVLNRYSLDSGKDLVILNTHNSAYVYDSVLRVEEMQILKEVMLDEYKKGNY
                     IIAGGDWNQNPPGYNPSGDYNMHKFFPSQVKMNADFMPDGWQWAYDDVAPTNRQNDKP
                     FKIGVNGTTCLDYYLVSPNIGIIDVEVIDLKFEDSDHNPIYLRARLKL"
     gene            887..3097
                     /locus_tag="QF480_02525"
     CDS             887..3097
                     /locus_tag="QF480_02525"
                     /inference="COORDINATES: protein motif:HMM:NF026220.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YCF48-related protein"
                     /protein_id="HJN05468.1"
                     /translation="MNKFIFIGILSIILAVQLHSQTPWIRISPNPIESSLKEITKIPG
                     TDRLMAIGSGASLLYTDDMGENWHVSYQPAGISRFITFNAIHFVDSNIGYLAGTKSTL
                     LKTLDGGMTWQDVSPQGDNDLFDVYFHDELRGIITKGSTLLKTDDGCQTWDTIPIGIS
                     YNPRHLHFVNDSLGFLGNTNNSNYYKTDDAGNTWSLINLSQIITDFKAKAVNFINENI
                     GFISGYIYISGTYEYFILKTFDGGLNWSIVYSDPFIDIKEIYFYDNDIGFAVGPRIMN
                     DNIIVKTINGGDTWQNGIMNDYSIRDLNSFAYSNEGVALCVGDYGQIFTSIDVGENWD
                     RTNETVCEGRINVAQIVNDSVVYIGTTPHGGGGVPSGAIYKSKDAGYTWNRVFRHIPF
                     ISICFLNELSGFTCGPAYGNVYKTINGGSTWQTLEVNTYNFDPYCVYFLNEQVGFVSG
                     EENWAEIFKTTDGGLSWYKTDSYSHQIFSKITCLEFTDDSVGFAVGEYYPTEALLLRT
                     IDQGETWTTDSLGFPFALKKIHFINPDIGFLLTYYNVILKTIDGGANWYEVPSGVTGY
                     PIFNDIDFPTDNIGYITLTNNEIQIIKTTDGGESWFPIDFPSTATPTTIDFFNVDEGL
                     IMGGGGIIFKTYTGGIVDVPEFPEDITKDAGLFCYPNPAKDILNIVLKLENEKYPDLI
                     IVYDNFGRIIKKIENLSKHKMIELDISDWKNGVYFIISITNGKPDRRGKFVKVE"
     gene            3192..>3962
                     /locus_tag="QF480_02530"
     CDS             3192..>3962
                     /locus_tag="QF480_02530"
                     /inference="COORDINATES: protein motif:HMM:NF019042.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HJN05469.1"
                     /translation="MRKLYFIIALIFVSSQLFSQTDKDFKVYWDNGLKIDSRKGNTKI
                     KMGGRIQYDIMWIQEDDSLKKHFDAQNGAEFRRARIYTSGTIYNNIKFKFQVDFAGGI
                     VVIKDAYIQLTKIPAVGNIRVGNFKEPFGLNMLTSSKYITEMERPTANAFDNDRNLGL
                     MLFNQHFKKRLSWFAGYFYPSGNVGIYKGNQYDLVFRLVGLPVYNVDDEYKVLHLGAS
                     FAHQYHDNSEVFYNIRPEAHLAPRYLNLKIPNVADINEI"
BASE COUNT         1322 a          597 c          766 g         1277 t
ORIGIN      
        1 tggcaaataa gcatctggtt aatattattg attttgtagt gagtaatgat accgtcgatt
       61 tttggttatt acaggaagtt gatgtaagat cgaaaagaag ttattatcta aatgaagttg
      121 agctacttac taccgcgaaa agtggcagca atagtgtttt tgcaaagaac tactcggtgc
      181 catttgtgcc ggttcctgtt actaatccta tgggatatgt tcaatccgga atattaatgt
      241 tttccgattt tcctcctgta gaagcaatca gatacgcata cccgctaatt gcatcctggc
      301 ccgataaatt gtttttatta gacagatgtt ttgtactaaa cagatactct cttgatagtg
      361 ggaaggatct cgttattctt aatacacata actctgcata tgtgtatgat agcgtgctac
      421 gagttgagga gatgcaaatc cttaaagaag taatgcttga tgaatataaa aagggaaatt
      481 atataatagc aggtggggac tggaatcaga atccgcctgg ttacaatcca agtggtgatt
      541 ataatatgca taaatttttt ccttcacaag ttaaaatgaa tgcagatttt atgcccgatg
      601 gttggcaatg ggcttatgat gacgtagcac ctaccaacag acaaaatgat aaaccattta
      661 agatcggggt caacggaact acatgtttag attattattt agtttccccg aatattggca
      721 ttattgatgt tgaagttatt gacttgaaat ttgaggatag cgatcataat cctatttatt
      781 taagggctcg attgaaactg tagattgtaa gaagtaatga gatatttatt tgcaatttat
      841 agagcataaa atgactattt ttataggttg aaaaactcaa acaataatga ataaatttat
      901 attcatcggt attctttcaa taatcttagc cgtacaactt cattcacaaa ccccatggat
      961 tagaatttct ccaaacccaa ttgaaagctc actaaaggaa ataaccaaaa taccaggcac
     1021 tgatagactg atggctatcg gctcaggagc atccttatta tatactgatg atatggggga
     1081 gaattggcat gtaagttatc aaccagcagg tatatcccgg tttatcacct ttaatgccat
     1141 tcattttgtt gactcaaata ttggctattt ggcaggaacc aaatcaacat tattaaaaac
     1201 attagatggt ggtatgactt ggcaagatgt aagtccccaa ggtgataacg acctttttga
     1261 tgtctatttt catgatgagt tgagagggat cataacaaag ggaagtactt tacttaaaac
     1321 agatgatggt tgtcaaactt gggatactat accaattgga atctcatata acccccgaca
     1381 tcttcatttt gtcaacgatt ctcttggttt tctgggtaat acaaataatt caaattatta
     1441 taaaactgat gatgccggaa atacttggag tttgattaat ctaagccaaa taattacaga
     1501 ttttaaagca aaagctgtta attttataaa cgaaaatata ggtttcataa gtggatatat
     1561 ttacataagt ggtacctatg agtatttcat actaaaaact tttgatggag gattaaactg
     1621 gagcatagta tattctgatc catttattga tattaaagag atttatttct atgataatga
     1681 tattggcttt gcggttggcc ctagaatcat gaatgacaac ataattgtta aaacaatcaa
     1741 tggtggagac acatggcaaa atggtattat gaatgattat agtattaggg atttgaacag
     1801 ttttgcgtat tcaaatgaag gtgttgcctt gtgtgtagga gattatggtc agatatttac
     1861 aagcatagat gttggcgaaa attgggatag aacaaatgaa actgtatgtg aaggaagaat
     1921 aaatgttgct cagatcgtta atgatagtgt tgtgtatata ggaacaacac cccatggtgg
     1981 cggaggtgtc ccgtcaggag ctatttataa atcaaaagat gcaggttata cttggaatcg
     2041 agttttcagg catattccat ttatctcaat ttgtttctta aatgagttat ctggtttcac
     2101 ttgtgggcct gcttatggta atgtatataa aacaataaat ggaggatcta cgtggcagac
     2161 ccttgaggtt aacacgtata actttgatcc ctattgtgtt tacttcctta atgaacaggt
     2221 tggttttgta agtggagagg aaaactgggc tgaaattttc aagacaacag atggaggact
     2281 aagttggtat aagactgact catattctca ccagattttc agtaaaatca catgcttgga
     2341 atttactgat gatagtgttg ggttcgcagt tggagaatat tatccaactg aagcattact
     2401 actccgtact attgatcagg gagaaacatg gaccactgac tcattgggat ttccttttgc
     2461 tttaaaaaaa atacatttca ttaatcctga tattgggttt cttctaactt attataatgt
     2521 aatcctaaaa actattgatg gtggtgccaa ctggtatgaa gtcccttcag gtgtcaccgg
     2581 ttatcctata tttaacgata tcgattttcc tactgataat attggatata taaccttgac
     2641 aaataatgag atacaaatca ttaaaaccac tgatggaggt gaatcatggt ttccaattga
     2701 tttccctagt actgcaaccc caaccactat tgatttcttc aatgtagatg aaggcttaat
     2761 aatgggtggt ggtggtatta ttttcaaaac ttatacaggg ggcatagttg atgtcccgga
     2821 atttcctgaa gatattacta aggatgctgg tttgttttgc tatccaaatc ccgcaaagga
     2881 tatacttaat attgtactta agttagaaaa tgaaaaatac cctgatttga tcatagttta
     2941 tgacaacttt ggcaggataa taaagaaaat tgaaaatcta tctaaacaca aaatgatcga
     3001 attggatatt tcagattgga aaaatggagt ttattttatt atctctataa ccaacggaaa
     3061 acctgatagg agagggaagt ttgttaaagt tgaataagtt gcatattaag tttaagttaa
     3121 ctttgtaaaa tgacgaatta cgcaaaagaa tatttttcat ttttgccaca gttaacaaga
     3181 aactaaaaca aatgaggaaa ctatatttca ttattgcatt aatattcgtt agttctcaac
     3241 ttttcagcca aaccgacaaa gactttaaag tttattggga taacgggttg aagatagaca
     3301 gcagaaaagg taatactaaa ataaaaatgg gtggccgtat ccaatatgat atcatgtgga
     3361 tacaagagga cgattcgcta aaaaaacatt ttgatgcaca aaacggagcc gaattcagaa
     3421 gagccagaat ttacacttcc ggtacgatat ataataatat taaattcaaa tttcaggtgg
     3481 actttgccgg tggtattgta gttattaaag atgcctatat ccaacttact aaaataccag
     3541 ctgttggcaa tataagggta ggaaatttta aggaaccatt tggtttgaat atgcttacaa
     3601 gttcaaaata tattactgag atggagcgcc ctacagcaaa tgcttttgat aatgacagaa
     3661 accttggcct aatgcttttc aaccaacatt ttaaaaaacg tttgtcttgg tttgcaggtt
     3721 atttttaccc ttcaggtaat gtaggaatat ataaaggtaa ccaatacgat ctagtcttca
     3781 ggcttgtcgg acttccggta tataatgttg atgatgagta taaggtatta catctaggag
     3841 catcttttgc acatcaatat cacgataatt cagaagtatt ctacaacatt cgtcctgagg
     3901 cccatttagc acctagatac ttgaacctta aaattccaaa tgttgcagat atcaatgaaa
     3961 ta
//
LOCUS       DASCQP010000152         1532 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000622044, whole genome shotgun sequence.
ACCESSION   DASCQP010000152 DASCQP010000000
VERSION     DASCQP010000152.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1532)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1532)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1532
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000622044"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..807)
                     /locus_tag="QF480_02535"
     CDS             complement(<1..807)
                     /locus_tag="QF480_02535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009275938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitase family protein"
                     /protein_id="HJN05470.1"
                     /translation="MAFDIEMIKNLYNKFPTRVNAAKKLLGKPLTLTEKILYAHLDEG
                     IASQVYSRNESYVDFRPDRVAMQDATAQMALLQFMQAGRSKVGVPSSVHCDHLIQAKE
                     GAIKDLESANYTNHEVYEFLSSVSNKYGIGFWKPGAGIIHQVVLENYAFPGGMMIGTD
                     SHTPNAGGLGMIAIGVGGADAVDVMADMPWELKFPKLIGVKLSGKLSGWTSPKDVILR
                     VADILTVKGGTGAIVEYFGEGAQNLSATGRATICNMGAEIGATTSTFGYDD"
     gene            complement(1082..>1532)
                     /gene="nusB"
                     /locus_tag="QF480_02540"
     CDS             complement(1082..>1532)
                     /gene="nusB"
                     /locus_tag="QF480_02540"
                     /inference="COORDINATES: protein motif:HMM:TIGR01951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HJN05471.1"
                     /translation="FTDGYDLVNLLLIKFIENFSNKFSTQTLLPGIYKPNINGINEDR
                     DFVRKLYKHTIRHEEELVNELEVRTKNWEFERIPIMDVILLKMAIIELQEMETIPIKV
                     TLNEYIELAKYFSTSKSKVFVNGVLDKLIHELKEKGKINKTGRGLLE"
BASE COUNT          464 a          300 c          230 g          538 t
ORIGIN      
        1 atcatcataa ccaaatgtgg aagttgttgc accaatctcg gcacccatat tgcaaattgt
       61 agccctacct gttgcactaa ggttttgagc accttctcca aagtactcaa ctatggcacc
      121 tgttccacct ttaacggtca gaatatcggc tacacgaaga ataacatctt ttggagaggt
      181 ccatccactt aattttccgg aaagttttac tccaataagt tttgggaatt taagttccca
      241 gggcatgtca gccataacat caactgcatc ggctccgcca actccaattg caatcatccc
      301 aagtccacct gcattcggtg tatgggagtc agttccaatc atcataccac caggaaaagc
      361 atagttctca agaacaacct gatgaattat tcctgctcct ggtttccaaa aaccaatacc
      421 atatttattt gatactgaag atagaaactc gtaaacttca tgatttgtat aattagcact
      481 ctcaagatct tttatagctc cttcttttgc ttgtataaga tgatcacaat gaacgcttga
      541 tggtacaccc accttacttc tgccagcctg cataaattgc aaaagcgcca tttgagcagt
      601 agcatcctgc attgctacac gatcgggtcg aaagtctaca tatgactcat ttctactgta
      661 aacttgggat gcgattcctt catcaagatg cgcataaagg attttttctg taagagtaag
      721 tggttttccc aacaattttt ttgctgcatt aactcttgtt gggaacttat tataaaggtt
      781 tttaatcatt tctatatcaa atgccataat ctctgatttt aataaacttt aatactagaa
      841 tttctttgtt ttttgaggtt tgcaaagtta ctaaaaacgt acaaatagca tctatcggaa
      901 ttgagttttt actaatgaat ttgagttgaa actttgaaat gtgctcttag tgttttaagc
      961 ataaatatta aacatcactt attttgacca catggccact tttgctttca taactagatg
     1021 tcttttcata cttatttgag ggaaaggtat aataatataa gactgaatat aaatcaaaat
     1081 tctactctaa aagaccacga ccagttttat taattttgcc tttttctttt agttcgtgta
     1141 taagtttgtc taacactcca ttaacaaata ctttgctctt agaagtactg aagtatttgg
     1201 cgagttcaat atattcattt aatgtcacct ttattggaat tgtttccatt tcttggagtt
     1261 caattatagc cattttaaga agtattacat ccattattgg tattctctca aattcccaat
     1321 ttttggtcct cacttctaac tcattaacta attcttcttc atgtcttata gtatgtttgt
     1381 atagctttct gacaaaatcg cggtcctcat taataccatt aatattcggt ttataaatgc
     1441 caggtaacaa agtttgcgta ctgaacttat tcgagaaatt ttctataaat tttataagaa
     1501 gtaaatttac aagatcatat ccatcagtga aa
//
LOCUS       DASCQP010000153         3236 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000622602, whole genome shotgun sequence.
ACCESSION   DASCQP010000153 DASCQP010000000
VERSION     DASCQP010000153.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3236)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3236)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3236
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000622602"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..223
                     /locus_tag="QF480_02545"
     CDS             <1..223
                     /locus_tag="QF480_02545"
                     /inference="COORDINATES: protein motif:HMM:NF012300.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05472.1"
                     /translation="LDIGIELIETVKKNAPNSAILILINKSDLKNEWDINEDDIIGLS
                     KIGYEVIETSAKTNEAVELAFNKITKLML"
     gene            228..1739
                     /locus_tag="QF480_02550"
     CDS             228..1739
                     /locus_tag="QF480_02550"
                     /inference="COORDINATES: protein motif:HMM:NF014567.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HJN05473.1"
                     /translation="MLTSLPHNIIEYLINELPPFTGVLIIKTDDKGKIIGFHGPHKEY
                     LRTKPEIGKPVHEYVPALYAMIPPHISPMILNKVLSNSAVYADIHLVEANQNEYWIFL
                     VDQNREAESIRGIIQKINEDKLLKESETKIEPGKDCNLFAALDYLSLKIEEDENIIIN
                     SNIPWWFSMLAPEYSENDKINIYEVFPYFEVFNIEADEFWAKKENGKIKSGIWIETLN
                     DGQEIALSAIAIYLNSNKYIFVRLEEEIDKEPVVLQLAREQKLAYEKLEKAERKLKTL
                     LEYKDKFVSIVSHDLRSPVAAVLGIADMLVNDKKELSKLDEFYIEMIHNIKEEMLRLL
                     DYNDKLYHWSNLELGNFKVVKEKVSLKKIISTAYRTAEKKLKSKNLSFSTNLKKDIEI
                     DVDMTLFLQVINNLLANAIKFTPENGSISVNVTVGDNLQIAIIDSGVGMSKRVSEGIL
                     SGFTRHSSLGTDGEKGTGLGLGIVKKILDAHGFTINVKSEEGMGSEFIINIPT"
     gene            complement(1786..>3236)
                     /locus_tag="QF480_02555"
     CDS             complement(1786..>3236)
                     /locus_tag="QF480_02555"
                     /inference="COORDINATES: protein motif:HMM:TIGR03904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="YgiQ family radical SAM protein"
                     /protein_id="HJN05474.1"
                     /translation="LKDIFPDTPIIIGGVEASMRRFTHYDYWKDELNPSMLWQSGADL
                     MVYGMGEKSITQIVKLLNKGVPFNKLNTIPQTAFLVNSESDIPINKKWETTMLASHKE
                     CLNDKLIFARNFKIIEVESNKVYAKRLLQRIEDKYLVVNPAIPLLTENEIDKTYDLPF
                     TRLPHFKYKSKGQIPAYEMIKFSVNIHRGCFGGCSFCTISAHQGKFVSSRSERSVMEE
                     VKKVTQLPDFKGYLTDLGGPSANMYKMRGVYQRICDKCVRASCIFPNICYNLSTSHKP
                     MLDLYEKVESIPEIKKVNIGSGIRYDLLTKEQNVNGGDDLDSYLKRVVTKNVSGRLKI
                     APEHTSEAVLKVMRKPSFDLYHSFKKKFLAISEKAGLKQQIIPYFISSHPGSTEEDMA
                     QLASDTKAAGLQLEQVQGFTPTPMTNATVMYYTGVNPYNLKPIYSAHTKEQKERQHMY
                     FFWYKPEFRTRIKNSLLKLGRKDLIKKLLGKF"
BASE COUNT         1089 a          549 c          580 g         1018 t
ORIGIN      
        1 cctcgatata ggtattgagt taatagaaac agttaaaaaa aatgccccaa attctgctat
       61 attgatacta attaacaaat ctgaccttaa gaatgagtgg gatattaatg aagacgatat
      121 aattggtctc agtaagatag gttatgaggt gattgaaaca agcgccaaaa ctaatgaagc
      181 tgtagaacta gcttttaata aaatcactaa gttaatgctt taatcagatg ctcacaagtt
      241 taccccacaa cataatagaa tatctcatta atgaattacc tccatttaca ggtgttttga
      301 taataaagac tgatgataaa ggcaaaatca ttggctttca tggccctcat aaggagtatt
      361 tgagaacaaa acctgaaatt gggaagcctg ttcacgaata tgttccagca ttatatgcta
      421 tgattccccc tcatatttct ccaatgattc taaataaggt actttcaaac agcgcagtat
      481 atgccgatat tcatttagtt gaggccaacc agaatgaata ttggatattt ttagtcgacc
      541 aaaaccgtga agcggaaagc ataagaggca ttattcaaaa aataaatgaa gataaactac
      601 ttaaagagtc tgagacaaaa atagaaccag gtaaagattg caatcttttc gcagcattgg
      661 attatctgag tttgaagatt gaagaggatg aaaatataat tattaattcg aacattccat
      721 ggtggtttag tatgctagca cctgaatatt ctgaaaacga taaaataaat atttacgaag
      781 tatttcccta ttttgaagtt ttcaatatcg aagcagatga attttgggca aagaaagaaa
      841 acggtaaaat aaaatcagga atctggatcg aaacactcaa cgacggacag gaaatagctt
      901 tgtctgctat cgcaatttat ttaaatagca acaaatacat atttgtccga cttgaagaag
      961 aaattgacaa ggaacctgtt gtgcttcagc tggcaagaga gcaaaaacta gcttatgaaa
     1021 aacttgagaa ggctgaacga aagctaaaaa ctttactcga atataaggat aagtttgttt
     1081 caattgtatc acatgattta cggtctccag tagctgctgt acttggcata gctgatatgc
     1141 ttgttaacga caaaaaagaa ctctccaaac tcgatgaatt ttacatagag atgattcata
     1201 acattaagga ggaaatgtta agattactgg attacaatga taaattatat cactggtcaa
     1261 accttgagct aggaaatttt aaggtagtta aagaaaaggt aagtcttaaa aagattatca
     1321 gtacggccta taggacagct gaaaagaaac ttaaatccaa aaaccttagt ttttcgacta
     1381 accttaaaaa agacattgag atagatgttg atatgacgtt gtttttgcaa gtaatcaaca
     1441 atctattagc caatgcaatt aaatttacac ctgaaaatgg tagtatatca gttaatgtta
     1501 cggtaggtga caatctacaa attgcaatta ttgattcagg agtaggtatg tcgaaaagag
     1561 taagtgaagg tatactgtca ggttttacca ggcatagctc cttgggcacc gatggagaga
     1621 aaggtactgg actgggtcta ggaatagtaa aaaaaattct agatgctcat ggatttacta
     1681 ttaatgtgaa atcagaggaa ggaatgggtt cggaatttat tataaatatc ccaacctaaa
     1741 taaacttatt tagtaatcat ttctgacacg tatatcataa acttgtcaaa acttacctaa
     1801 taattttttt attaggtctt ttctgccaag cttcagcaag ctatttttaa ttctggttct
     1861 gaattctggt ttataccaga aaaagtacat atgctgacgt tctttttgtt cttttgtatg
     1921 tgcagaataa atcggtttca agttataagg atttactcct gtatagtaca ttaccgttgc
     1981 atttgtcatt ggagtaggag tgaagccttg aacctgttca agttgtaaac ctgctgcttt
     2041 agtgtcagaa gctagttgag ccatatcctc ctctgtactc ccagggtgac ttgatataaa
     2101 atatggtata atttgttgtt ttaatcctgc tttttcacta atagccaaaa atttcttttt
     2161 gaacgagtga tatagatcaa acgagggttt acgcataact tttagtacag cttccgatgt
     2221 atgctctggg gcaattttaa gtctacctga aacatttttt gtaacaaccc tttttaaata
     2281 actatcaaga tcatcacctc cattaacatt ctgctctttt gtgagaaggt cgtacctaat
     2341 tccgctacca atatttactt ttttaatttc cggtattgac tcaacctttt catatagatc
     2401 taacattggc ttgtgagatg tgctaaggtt ataacatata ttgggaaaga tacatgaggc
     2461 gcgcacacac ttgtcgcata ttctttgata aacacctctc attttgtaca tattagcgga
     2521 cgggccacct aaatctgtga gatagccttt gaagtcaggt aattgtgtca ctttttttac
     2581 ttcttccata acagacctct ccgatcgaga agaaacaaac ttgccctgat gtgctgaaat
     2641 agtacagaag ctacacccac caaaacaacc ccgatggata tttactgaaa atttgatcat
     2701 ctcatatgca gggatctgac ctttactttt atacttaaaa tgagggagcc ttgtaaaagg
     2761 gagatcataa gttttgtcta tttcattttc agtcaggagt ggaatggcgg gatttacaac
     2821 aagatattta tcctcgattc gctgtaatag cctttttgca tatactttat ttgattcaac
     2881 ttcgataatc ttaaaattac gagcaaaaat cagtttgtca tttaagcact ctttgtggga
     2941 ggcaagcata gttgtttccc acttcttatt tatcggaata tctgattcag aattcactaa
     3001 gaatgcagtc tgtggtatag tatttaattt attgaaaggt acccccttat tgagcaattt
     3061 cacaatttga gtaatagact tctcacccat accataaacc attagatcag cccccgactg
     3121 ccacaacatg ctagggttca gctcatcttt ccagtaatcg taatgcgtaa atctcctcat
     3181 tgaagcctct acaccgccaa ttattattgg agtatcagga aaaatatcct tcaaga
//
LOCUS       DASCQP010000154         1980 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000625843, whole genome shotgun sequence.
ACCESSION   DASCQP010000154 DASCQP010000000
VERSION     DASCQP010000154.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1980)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1980)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1980
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000625843"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(2..169)
                     /locus_tag="QF480_02560"
     CDS             complement(2..169)
                     /locus_tag="QF480_02560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018109438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HJN05475.1"
                     /translation="MAYKISDDCTACDSCIDECPTEAITEGDIYVIDPDLCTDCGACA
                     DVCPVEAISPE"
     gene            585..>1980
                     /locus_tag="QF480_02565"
     CDS             585..>1980
                     /locus_tag="QF480_02565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018339642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase subunit alpha"
                     /protein_id="HJN05476.1"
                     /translation="MASKKNKVVELDHAVIRFAGDSGDGMQLTGSLFSDSTAFAGNDF
                     ATFPDYPAEIRAPQGTVAGVSGFQIHFGHTDIHTSGDLADVLIAMNPASLKANMRWIT
                     NEAIIIVDSDAFIEKNIAKAGYITNPLTDDSLSGHLIIQAPLTTLTREAVKDLNLDNK
                     TAQKSKNMFALGIVFYMFNRDYKKTYSFFESKFATNPLIIEANKLVLESGYNFGDTIE
                     AFANTYKVEPALLDKGKYRNVTGNLATAWGFLAASERSDCNIFLGSYPITPASEILQE
                     ISKHKEFNAISFQAEDEIAGIVSTIGASFTGALAITTTSGPGLSLKSEAIGLAVMTEL
                     PIVIVDVQRGGPSTGLPTKSEQSDLMQALYGRNGEAPVIILAASSTSDCFYSAFNASK
                     LALEHMTPVILLTDGSIANGSEVFKIPKVKDLPEIKPPRVEANDKTYKPYARDDEKLS
                     RRWALPGTEGLRHRI"
BASE COUNT          648 a          329 c          370 g          633 t
ORIGIN      
        1 attattcagg agaaattgct tcaactggac aaacatcagc gcatgccccg caatcggtgc
       61 aaagatctgg atcaataaca tagatatcac cttcagtaat tgcttcagtt ggacattcat
      121 caatacagct atcacaagca gtacagtcat ctgaaatttt ataagccata atcaaataaa
      181 tttaatatta aaaatagttt gcaaatatat gattttgttt aaaacctaat ctttttcgac
      241 ccatttttaa ttacatattt ctatcttttt tctaattatt tagtttggat aaaatcggca
      301 gaaaaagtag gcagattttt agtaaatttt gatgacttga accgatattt tacaaaagat
      361 gtctacgtaa attaaaaatt ataatactgt cgaattacga actgtgaata agtaaggggt
      421 taattgatat cgtgatttat ctaacaggca gtagatcagg cattaaagat attgagtaga
      481 tatcttaaat taagcagtta tttttggtaa aaaaatcaca gattataagt tgaacgagta
      541 taaataaagt tacttttgac cattatttta aacttaatgc acagatggca tcaaagaaaa
      601 ataaagtcgt cgagttagac catgctgtta tacgatttgc aggtgattct ggagatggaa
      661 tgcaactaac tggaagctta ttttccgatt caacagcatt tgctgggaat gattttgcaa
      721 cttttcctga ttatcctgca gaaattcggg ctccacaagg tacagttgct ggagtatctg
      781 gttttcagat tcattttggg catactgata ttcacacttc aggtgattta gcagatgttc
      841 ttattgcaat gaatccggct tctcttaaag ccaatatgcg ttggattacc aatgaagcaa
      901 ttatcatagt tgattctgat gcttttatcg aaaaaaatat tgcaaaagct ggttatatca
      961 caaatcctct aactgatgac tcattatccg ggcatttaat tatacaggct ccacttacta
     1021 cattaactcg tgaagccgtt aaagacctta acctggataa taaaaccgca caaaaatcaa
     1081 agaatatgtt tgcccttggg attgtgtttt acatgtttaa cagagattac aaaaaaacat
     1141 attctttctt tgaatcaaag tttgcaacta atccgttaat aattgaggct aataaattag
     1201 tcttggaaag tggttataat tttggtgaca ccattgaggc ttttgctaat acttataaag
     1261 ttgaacctgc tcttcttgat aaaggtaaat atcggaacgt aactggtaac ttagcaactg
     1321 catggggatt tttagctgca tcagagagat ctgactgtaa catattcctt ggatcatatc
     1381 caataacgcc tgcttctgaa atattacagg agatatcgaa acacaaagag tttaatgcaa
     1441 tttcatttca ggcagaagat gagattgctg gaattgtttc aaccattggt gctagcttta
     1501 caggggcttt agctataact accacatccg gacctggtct ttcacttaaa agtgaggcca
     1561 ttgggttggc agttatgacc gagctaccta ttgtaattgt tgatgttcaa cgtggtggac
     1621 catctactgg gctaccaaca aaatctgaac aaagtgattt aatgcaggca ctatatggtc
     1681 gtaatggtga agctcctgtg ataattctgg ctgcatcaag tacatctgat tgtttttact
     1741 cagcctttaa tgcttcaaag ttggcccttg agcacatgac gccagttatt cttcttactg
     1801 atggatcaat agcaaatggt tctgaagtat ttaaaatacc aaaggttaag gatcttccag
     1861 aaattaagcc tcctagagtt gaggcgaatg acaaaactta taaaccatac gcaagagatg
     1921 atgagaagct tagtagaagg tgggctttgc ctggtactga aggactaaga catagaattg
//
LOCUS       DASCQP010000155         4485 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000632450, whole genome shotgun sequence.
ACCESSION   DASCQP010000155 DASCQP010000000
VERSION     DASCQP010000155.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4485)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4485)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4485
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000632450"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            77..784
                     /gene="pnuC"
                     /locus_tag="QF480_02570"
     CDS             77..784
                     /gene="pnuC"
                     /locus_tag="QF480_02570"
                     /inference="COORDINATES: protein motif:HMM:TIGR01528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015663 - nicotinamide mononucleotide
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015890 - nicotinamide mononucleotide
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamide riboside transporter PnuC"
                     /protein_id="HJN05477.1"
                     /translation="MSDFVNFFLQPYQTATTFNIVLEFIAALLGVISVLYAWKENILV
                     FPTGIISTGIYVYLLSQWTLYGDLIINVYYTLMSIYGWYMWRKVIDNQNHHISITRTN
                     LVDKLKAIGIFLFTSIFVIVVYRYYNVMPNQLDFVESTAYAWNHITSGNLQDFRDATP
                     FLDTFTTGIFFAAMWLMANKKLESWTLWIIGNVVSIPLYFVKGYGFTGIQYSIFLVLA
                     IMGYIEWRNQIKLKNIA"
     gene            777..1301
                     /locus_tag="QF480_02575"
     CDS             777..1301
                     /locus_tag="QF480_02575"
                     /inference="COORDINATES: protein motif:HMM:NF024911.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HJN05478.1"
                     /translation="MLKRVAIIGPESSGKSWLTCELAAYYNTNKVDEYAREYFKHRKY
                     EYTLEDIVAIAIGQMNNEEAIASSSKRIIFCDTELIVMKIWSKEVFGTVPGWIEKQTL
                     ENSYDLYLLCYPDLNWEPDPLRSNPHNRQYIYNLFVKELDQNNRNYRVVKEKGEQRLK
                     NAINFVDELLKDGS"
     gene            1291..2490
                     /locus_tag="QF480_02580"
     CDS             1291..2490
                     /locus_tag="QF480_02580"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HJN05479.1"
                     /translation="MGVKINERLKVLYLTRWYPNRWDPMPGLFIQRHAESANNCCDVG
                     VVYAHQTDERLCEQQIYVIDYNEENQVPTAKIYYLSSKIKLFHFNKLVNIYRFFRANM
                     IGLKLMKKQLGGFDLVHIHILTRLGLLGLYYKLFKGIPYLISEHWSRYLDLTGSFNGV
                     FRKLITRVIVKHASSVTTVTNNLAKAMKSHKLLNDNYVVLPNVVDNTFLNKPDNALLK
                     NDPIVFIHVSCFEDKSKNISGLLRTISNLSEIRNDFIFKLVGDGMDKDWLRNLASELG
                     LTEKQVIFTGLLEGEKLVNEMASADMLIVFSNYENLPVVINESLSLGVPVIATKVGGI
                     PERINNENGVLIEAGNEDQLLANLISFLDGDLSFNMDKIKSEAQIEFSPESIGTMLCE
                     LYTKASK"
     gene            complement(2512..3381)
                     /locus_tag="QF480_02585"
     CDS             complement(2512..3381)
                     /locus_tag="QF480_02585"
                     /inference="COORDINATES: protein motif:HMM:NF012791.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HJN05480.1"
                     /translation="MQTILIPVDFSDHSVSTYKFAIKIVGTVNETRLYFLHSYNDQLL
                     IPDSGLSSGFDNDVFMNMQLIEEFKQLAKNNMKQLKKEVEDYIKAEKLNNFKVNTMVS
                     GGDPGWEITDASKDIHPDFIVMGTQGIGKKGILEGSMAKKIMNKADVPVIAVPSGEYD
                     HDNLRIMYASNNHEKDFVKIKLLFKLFENLPFKIFTVHFHFEGSSHDNSNQLNDLKEA
                     FSAERISKQINFSLIDTNNKDNALEAFVEHNNINVIAFIAHKSNIFKSLFRPTITKKD
                     FFKLGLPMIALHE"
     gene            3541..>4485
                     /locus_tag="QF480_02590"
     CDS             3541..>4485
                     /locus_tag="QF480_02590"
                     /inference="COORDINATES: protein motif:HMM:NF019850.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mur ligase family protein"
                     /protein_id="HJN05481.1"
                     /translation="MKVHFIAIGGSAMHNLAIAMKNNRHDVGGSDDEIFEPSRSRLSD
                     NSLLPARYGWYPEEISKDIDAIILGMHARIDNPELLRAKELGLKIYSYPEFLYYHSKN
                     KKRVVIGGSHGKTTITAIIMHVLRKLNYDFDYLVGSKIKDFDVMVRLSEDAPIMIFEG
                     DEYLSSPIDLRPKFHWYFPDIALLSGIAWDHINVFPTWENYIEQFEKFISLINKNGSL
                     IYNVEDKILEKLASARNDISTVSYRIPKYEIQNGINYMITDNGEVELKIFGKHNMMNI
                     NGARLVCNQLGIDDKDFFAAVSSFEGTANRLELVMKNGS"
BASE COUNT         1472 a          665 c          810 g         1538 t
ORIGIN      
        1 ccatgaatat tccacattca gtttttgtgt tgaagattat taatgctgat ttacagatac
       61 atcctaataa catttgatga gcgattttgt aaatttcttt ttgcaaccct accaaacagc
      121 aacaacattc aatattgtcc ttgaatttat agcagccttg ttaggtgtta taagtgtact
      181 ttatgcctgg aaagaaaata ttctggtttt tccaactgga attatcagta cgggtattta
      241 tgtttatttg ctttcacaat ggactttata cggtgatttg atcatcaatg tttattacac
      301 gctaatgagt atttatggat ggtatatgtg gcgtaaagta atagacaatc aaaatcatca
      361 catttcaata acaagaacta atttagttga taaattgaag gcaattggta tcttcttatt
      421 tacatccatt tttgtaattg ttgtttacag gtattacaat gttatgccta accaacttga
      481 ttttgttgaa agtacagctt atgcatggaa tcatatcact tcaggtaacc tgcaagattt
      541 tagagatgcc actccttttc tggatacttt tactaccgga attttctttg ctgctatgtg
      601 gctaatggct aataaaaaat tagaaagctg gacattatgg attattggta atgttgtctc
      661 cattccttta tattttgtta aaggatatgg ctttacagga atccaatact ctattttctt
      721 agtcttggcg ataatgggtt acattgagtg gcgaaaccag attaaattaa aaaacattgc
      781 ttaaacgagt tgcaattatc ggtcccgaat cgtctggaaa atcatggctt acatgtgagc
      841 ttgcagctta ttataatact aataaggtag atgaatatgc gcgtgagtat tttaaacata
      901 ggaaatacga atatacttta gaggacatag ttgcaatagc aattggtcaa atgaataatg
      961 aggaggctat cgcttcaagt tcaaaaagaa ttattttttg cgatactgaa ctgattgtta
     1021 tgaaaatatg gtcgaaagaa gtatttggta ctgtgcctgg ctggattgaa aaacaaactc
     1081 tagagaatag ctatgatctc taccttctat gttatcctga cttaaactgg gagccggatc
     1141 ctttacgtag taatcctcat aacagacaat atatttataa tttgtttgtt aaagaattag
     1201 accagaataa tcgtaattat agagttgtta aagaaaaggg tgagcagcgt cttaaaaatg
     1261 caattaattt tgttgatgaa ttattgaaag atgggagtta aaattaacga gagattaaaa
     1321 gtactgtatc ttactagatg gtatcctaat cgatgggatc cgatgcccgg actttttatt
     1381 cagcgccacg ccgaatccgc aaataactgt tgcgatgttg gcgttgttta tgctcatcaa
     1441 actgatgaac gactctgtga acaacagata tatgttattg actataatga agagaatcaa
     1501 gttcctacag ccaaaatata ttatttatct tcaaaaatta aactgtttca ctttaataaa
     1561 ttagttaata tatatcgctt tttcagggca aacatgatag gtttaaagct tatgaaaaag
     1621 caacttggtg gatttgactt agttcatatt cacatactaa ctcgacttgg tttgttgggt
     1681 ttgtattata agttattcaa aggcattcca tatcttataa gtgagcattg gtcgaggtat
     1741 ttggatttga ctggctcatt taatggagtt tttagaaaat taattactag agtcattgta
     1801 aagcatgctt catctgtaac aacagtgacg aataatctag caaaagcaat gaaatcgcat
     1861 aaacttctaa atgataatta tgttgtactt ccaaatgttg tcgataatac ttttttaaac
     1921 aaaccggata atgcgttgct aaaaaacgat cccattgtgt ttattcatgt gagctgcttt
     1981 gaagacaaat caaaaaatat aagcggttta ttaagaacta ttagtaatct atctgaaatt
     2041 cgtaatgatt ttattttcaa gcttgtaggc gacggcatgg ataaggattg gttacgtaat
     2101 cttgcttctg aacttggcct gacagaaaaa caagtaatat ttacaggatt gttggaagga
     2161 gaaaaacttg tcaatgaaat ggcttctgca gatatgctga tagtttttag taattatgag
     2221 aatcttcctg ttgtaataaa tgaatcacta tccctcggag tacctgtaat tgcaaccaag
     2281 gtaggaggga ttccggaaag aattaataac gaaaatggag tgttgattga agctggtaat
     2341 gaagaccaat tgttggccaa tttaatttca ttcttagatg gtgatttgtc ttttaatatg
     2401 gataaaatta aatcagaagc acaaatagag ttttcgccgg aatcaatagg tacgatgttg
     2461 tgcgaattat acacaaaagc ttccaaataa tactaaaata aactgattgc actattcgtg
     2521 aagtgcgatc attggcagcc ccaatttgaa aaaatctttt tttgttattg ttggtcgaaa
     2581 taacgatttg aatatgttag acttatgagc aataaatgca ataacattaa tgttattgtg
     2641 ctcaacaaaa gcttctaaag cattatcttt attattagtg tcaatcaatg aaaaattaat
     2701 ctgtttacta attctctcag ccgaaaatgc ttctttcaaa tcatttaact gattactatt
     2761 atcatggctg gaaccttcaa aatggaagtg aaccgtgaat attttaaatg gaaggttttc
     2821 aaaaagttta aaaagaagtt tgattttaac gaagtccttc tcatggttat tactggcata
     2881 cattattcta agattgtcat ggtcgtattc gcctgaaggc acagcaatta caggaacatc
     2941 tgctttattc attatctttt tcgccatgct tccctcaagt ataccttttt taccgatgcc
     3001 ttgcgtaccc atcacaatga aatcaggatg tatatcctta gaagcatcag ttatctccca
     3061 acccggatca ccaccagaaa ccatagtatt tactttaaag ttatttaatt tctcagcctt
     3121 tatataatct tcaacttctt tcttgagttg tttcatatta tttttagcca actgcttaaa
     3181 ctcttcaata agctgcatat tcataaatac atcgttatca aatccactgc ttaatcctga
     3241 atcggggatt agaagctgat cgttataaga gtggaggaaa tataatcttg tttcgtttac
     3301 agttcctact atcttaatgg caaatttgta agtagaaact gaatgatcag aaaagtcgac
     3361 aggtataagt atggtttgca tatttaataa tttttgttgt taattcctat aattttgttt
     3421 aagcataata tgtttgtccg aagtgactgt aaagttataa aaaaaagaat attactgtaa
     3481 aattcaattt cttttcattt tatcacctat ttttacccag aaaatttcac gcatttactg
     3541 atgaaagttc attttatcgc cattggggga agtgctatgc ataatcttgc tattgccatg
     3601 aaaaataata ggcatgatgt tggtggctcg gatgatgaaa tttttgaacc ttcacgaagc
     3661 aggttatcag ataatagctt acttccggca aggtatgggt ggtatcctga agaaatctcc
     3721 aaagatattg atgcaataat tcttggtatg catgcaagaa ttgacaatcc tgaattgtta
     3781 cgagcaaaag agttagggct aaagatctat tcatatcctg agtttcttta ctatcattct
     3841 aaaaataaaa aacgagtagt tattgggggt agtcatggaa aaacaactat aactgcaata
     3901 ataatgcatg ttcttcgcaa actgaattat gattttgatt acctggttgg ttctaagatc
     3961 aaagattttg atgttatggt acgattgagt gaagatgctc caataatgat ctttgaaggt
     4021 gatgagtacc ttagttcacc aatcgatctc agaccaaaat ttcattggta ttttcctgat
     4081 attgcactgc taagtggtat tgcctgggat catattaacg tttttccaac ttgggagaat
     4141 tatattgaac agtttgaaaa attcatttca cttataaata aaaatgggtc actaatttat
     4201 aatgttgagg ataagattct tgaaaaatta gcttctgcaa gaaatgatat tagtactgtc
     4261 tcttacagaa ttccaaaata tgaaattcaa aatgggataa actacatgat tactgataat
     4321 ggcgaagtag agctcaaaat ctttggaaag cataatatga tgaatattaa tggagccaga
     4381 cttgtatgta atcagctggg aattgatgat aaggatttct ttgcagcagt aagtagtttt
     4441 gagggtactg ccaatcgcct tgaattggtt atgaaaaatg gttct
//
LOCUS       DASCQP010000156         4606 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000638794, whole genome shotgun sequence.
ACCESSION   DASCQP010000156 DASCQP010000000
VERSION     DASCQP010000156.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4606)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4606)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4606
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000638794"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..678
                     /locus_tag="QF480_02595"
     CDS             <1..678
                     /locus_tag="QF480_02595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009316480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RnfABCDGE type electron transport complex
                     subunit D"
                     /protein_id="HJN05482.1"
                     /translation="VAIGMAKMSFGGLGKNIFNPALVARVFLLVSFPVQMTSWPKPSP
                     ITNGLADVITGATPLGILKEGLNNEKTISELTPNLPTYTQGLMGEMGGSMGEVSALAL
                     IIGGIYMLWKKIITWHIPVSMLLTVAIFSGIFWGVDPEHYADPLFHMLTGGMLLGAIF
                     MATDMVTSPMTKGGQLVFGFGVGLLTILIRLWGAYPEGVSFAILLMNATVPLINRGFK
                     PQRFGRN"
     gene            736..1323
                     /locus_tag="QF480_02600"
     CDS             736..1323
                     /locus_tag="QF480_02600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013611648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RnfABCDGE type electron transport complex
                     subunit G"
                     /protein_id="HJN05483.1"
                     /translation="MASKRESNFLNMVLTLFIVSAIAALALGGVYTVTKEPIALAKKK
                     KLEAAIKTVLPEFDTLRSEKIALGDGEDSLVLYFASKSKKVIGTAIKTYTMKGFSGRI
                     ELMVGFLQDGTINNTAVVSHKETPGLGDKMDIRKSDFPTQFKGKNPSSYKLDVTKYGG
                     DVDAITAATISSRAFCDAVKRAYDAFENHVGNDKK"
     gene            1355..1942
                     /locus_tag="QF480_02605"
     CDS             1355..1942
                     /locus_tag="QF480_02605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009136622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit E"
                     /protein_id="HJN05484.1"
                     /translation="MNQIKNFTKGLIKENPVFVVLLGLCPTLGVTTSAINGLGMGLAT
                     TFVLVMSNLVVSIVRDVIPDKVRIPSFILIIASFVTIVELVMQAYTPGLFDALGLFIP
                     LIVVNCVVLGRAEAFASKNNIGSSIIDGLGMGLGFSFALTLLGAVRELLGAGAIFGFN
                     LIEGELMLAFILAPGAFIALGYLIALINKLTSTQN"
     gene            1948..2520
                     /locus_tag="QF480_02610"
     CDS             1948..2520
                     /locus_tag="QF480_02610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002562594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex protein RnfA"
                     /protein_id="HJN05485.1"
                     /translation="MEYFVIIIGSIFVSNIVLAQFLGICPFVGVSGKLSTSVGMGGAV
                     LFVLTLATLVTWIIQYYVLNPFGLGFMQTIVFILVIASLVQMVEIILKKVSPSLYSAL
                     GVFLPLITTNCAVLGVAILTIQKDFNLLEGVVYAVANAIGFTLALVLFAGIREHLDLM
                     EVPKGMKGVPIALVVAGILALSFFGFTGLV"
     gene            2593..3315
                     /locus_tag="QF480_02615"
     CDS             2593..3315
                     /locus_tag="QF480_02615"
                     /inference="COORDINATES: protein motif:HMM:NF016908.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HJN05486.1"
                     /translation="MDYKNLIRSTLNLLHLDLSKNLEYDRLTKLIMKRVIKPDSNCID
                     IGCHKGEILDIIIKYAPKGKHYGFEPLPILFDRLIEKFKNRATILHYALSDKDGFSTF
                     HHVKNAPAYSGIKKRKYDIDKPEIEEIKVELNKLDDIIPSDLKIDFIKIDVEGGEFGV
                     LKGGIQLLKKFKPIIIFEFGLGASDYYGTNPADMFSLITIELGLQIFLLKSFIKNNKA
                     LNLKEFEQCFNHNKEYYFIAHK"
     gene            3370..4035
                     /locus_tag="QF480_02620"
     CDS             3370..4035
                     /locus_tag="QF480_02620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013444377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HJN05487.1"
                     /translation="MESQPIIKLSNLSVFQKNKLVLTNVNLEILKGEFIYMIGKTGSG
                     KSSLMQILYADLPIEAGDAMVCGYNLKNIKRKNLPYLRRKLGIVFQDFQLLDDRSVRK
                     NLEFVLKATGWNEKKKIDDRILKVLDEVELIEKLNVMPHQLSGGEQQRIAIARALLNE
                     PEVMLADEPTGNLDPETSNGIMKILFKISELGKTVIMATHNYNLIHKFPGRVIKCEEG
                     TLK"
     gene            complement(4047..>4606)
                     /locus_tag="QF480_02625"
     CDS             complement(4047..>4606)
                     /locus_tag="QF480_02625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase family 1 protein"
                     /protein_id="HJN05488.1"
                     /translation="DYIPAFHPFKEVKCKLGKGEYVLYHGNLSVAENENAVNFLLDQV
                     FNELDVPLKIAGLNPPRQLKNRLADEQNIELVANPDNETLQKLIENAHVNISITAQKT
                     GLKLKLLNNLYNGRFSLVNNKMLSGSNLDELCVVANNHVTMKRKIKILFRKEFTAENI
                     KERKTNLNNIYCNGNNVKKLIDLIT"
BASE COUNT         1487 a          709 c          863 g         1547 t
ORIGIN      
        1 gttgcaatag gtatggccaa aatgtcgttt ggtggacttg ggaaaaatat atttaatcct
       61 gcacttgttg cacgagtatt cttacttgta tcgtttccgg ttcaaatgac atcatggccc
      121 aaaccatcac ctattacaaa tggtttagct gatgtaatta caggtgctac tcctctaggt
      181 atccttaaag aagggttgaa taacgaaaaa actatttcgg agcttacccc caatttacct
      241 acatatacac aagggcttat gggtgaaatg gggggctcaa tgggtgaagt aagtgcatta
      301 gcattaatta ttggtggaat ttatatgctg tggaaaaaaa taattacctg gcatatccca
      361 gtttcaatgc tcctcactgt tgcaatcttt tcaggaatat tctggggagt ggatcccgaa
      421 cattatgctg atcctttgtt ccatatgcta acaggaggta tgttattagg agcaattttt
      481 atggccacgg atatggtaac ctcaccaatg acaaaaggcg gtcaactcgt atttggcttt
      541 ggggttggtt tattaacaat attaattaga ctttggggag cttatcctga aggtgtatcg
      601 tttgctattc tacttatgaa tgcaacagta ccattaataa acagaggatt caaaccacaa
      661 agatttggga gaaattaact attgataaat taatcatttt atattgaatg atatatacta
      721 actaataaat tataaatggc tagtaaaaga gaatcgaatt ttttaaacat ggtgcttacg
      781 ctttttattg tctcggctat tgctgctctt gctttaggag gtgtttatac agttacaaag
      841 gaacctatag ctttggcaaa aaagaaaaag ctggaagccg caattaaaac agtcctccct
      901 gagtttgaca ctctgcgatc tgagaaaata gccttaggcg atggcgaaga ttcacttgtt
      961 ttatattttg cttctaagag taaaaaagtt ataggtaccg caattaagac ttatacaatg
     1021 aaaggcttta gtggtagaat cgaacttatg gttggttttc tacaagatgg cactattaat
     1081 aatacggcag ttgtatctca taaggaaaca ccaggattag gagataaaat ggatattaga
     1141 aaatcggact tcccaactca atttaaaggc aaaaacccta gtagctataa gcttgacgta
     1201 accaaatatg ggggtgatgt agatgctatt acagctgcaa ctattagttc aagagctttt
     1261 tgtgatgcgg tgaaaagagc atatgatgct tttgaaaatc atgtaggtaa cgacaagaag
     1321 tagtaactaa aattaatatg tttaagacat aactatgaat caaataaaaa atttcacaaa
     1381 aggattgata aaagaaaacc cggtttttgt ggtgcttctt ggattgtgtc caacattagg
     1441 agtaacaacc tctgcaataa atggattggg aatgggatta gcaaccactt ttgtacttgt
     1501 catgtcgaat ctagtagtgt caatagttcg agatgtaatt cctgataaag ttagaattcc
     1561 atcgttcatt ctaataattg catctttcgt aacaattgtt gaacttgtaa tgcaggctta
     1621 tacacctggt ttgtttgatg cacttggatt attcattcct ttaattgttg taaactgcgt
     1681 ggtattaggt cgtgctgaag cttttgcctc taaaaataat attggatcat ccataattga
     1741 tggattagga atgggcctcg gcttttcttt tgcacttaca ttattgggag ctgttagaga
     1801 attgttggga gcaggagcaa tattcggatt taacttaatt gaaggagaat tgatgctcgc
     1861 atttatactt gcccctggag cttttattgc acttggctac ttaatagcgc ttattaacaa
     1921 attaactagt acccaaaact aactgatatg gaatattttg taataattat cggatctata
     1981 tttgttagca acattgtgct tgctcaattt ttgggaattt gtccttttgt gggtgtttcc
     2041 ggaaaattgt caacatcagt tggaatgggt ggcgctgttc tgtttgtgct cacacttgcc
     2101 acattagtta cttggataat tcagtattat gttcttaatc ctttcggttt gggatttatg
     2161 caaactattg tttttatcct tgtaattgct tcactggttc aaatggttga aattatcctg
     2221 aaaaaagtaa gcccctcttt atactctgca cttggtgttt ttcttccatt aataacaaca
     2281 aactgtgcag tacttggtgt tgctattctt acaatacaaa aagattttaa cctattagaa
     2341 ggtgtagttt atgctgtcgc aaatgccatt ggtttcacat tagctcttgt gctttttgcc
     2401 ggaattcgtg agcatttaga tttaatggag gttccgaaag gcatgaaagg tgtaccaatt
     2461 gctcttgttg ttgctggcat actcgcatta tcattttttg gttttacagg actagtttaa
     2521 gtagacagtt tttcaaatga aaagaattag atttgcacaa aaccaatagt gcaaatttgc
     2581 ttaatctcaa aaatggatta taaaaatcta atcagatcta ctttgaattt attacatctg
     2641 gatttgtcta aaaatctgga atacgatcgg ttgacgaagt taataatgaa acgggtaatt
     2701 aaaccggatt ctaattgcat cgatataggt tgtcacaaag gtgaaatttt agatattata
     2761 attaagtatg caccaaaggg taagcattat ggctttgaac cgttaccaat cttattcgat
     2821 agattaattg aaaaatttaa aaatagagca accattcttc attatgcttt atcagacaaa
     2881 gatggttttt caacttttca tcatgttaaa aacgctcctg cttacagtgg tattaagaaa
     2941 cggaaatacg atattgataa gcctgaaatc gaagagatta aagttgaact caataaattg
     3001 gatgatatta taccatcaga tctcaagatt gattttatta aaatagacgt tgaaggagga
     3061 gagtttgggg tattaaaagg gggtattcaa ttattgaaaa aattcaaacc gattattatt
     3121 ttcgagtttg gattaggtgc tagtgattat tatggaacga accctgctga tatgttctct
     3181 cttattacaa tagagttagg gttacagata tttttactaa aatcatttat aaaaaataat
     3241 aaggcactaa acttaaagga gtttgaacaa tgctttaatc ataataagga gtattatttt
     3301 atcgctcata agtagtgatt gagaaactcg caatttatct atctttgggc taacaaattt
     3361 ttattgcaaa tggagagtca accaatcatc aaactttcaa acctttcggt tttccaaaaa
     3421 aacaaactgg tacttactaa tgtaaatctt gaaattttaa agggtgaatt tatttacatg
     3481 attggtaaaa ccggaagcgg taaatcaagt ttaatgcaga ttctttatgc agatttacca
     3541 attgaagctg gtgatgctat ggtttgtgga tataatctaa aaaatattaa gcggaagaat
     3601 ctgccatatc tgcgacgaaa acttggtatt gttttccagg actttcagct acttgatgac
     3661 agaagtgtta gaaagaattt ggagtttgtg ctaaaagcaa ctggatggaa tgagaaaaaa
     3721 aagattgatg atcgaatcct caaagtgctt gacgaggttg agctaattga aaaactcaat
     3781 gttatgcctc accagttatc tggaggagaa caacaacgga ttgcaattgc tagagctttg
     3841 ctaaatgaac ctgaagttat gttagctgac gagccaacgg gtaatcttga tcctgaaact
     3901 tcaaacggaa taatgaaaat tctttttaaa ataagtgagc ttggcaaaac agtaattatg
     3961 gcaacacata actacaatct aatccataaa tttccaggaa gggttattaa atgtgaagaa
     4021 ggaacattaa agtaaaaatc cagatcttaa gtaatcaaat cgatcagctt tttcacatta
     4081 ttaccattgc aataaatatt atttaagttt gttttcctct ccttaatatt ttcagctgta
     4141 aattcttttc taaacaatat tttaattttg cgtttcattg ttacatgatt attagcaact
     4201 acacatagct catctaaatt actaccactc agcattttat tgtttaccaa actgaaccta
     4261 ccattatata agttgtttaa taacttaagt tttaaacccg ttttttgcgc tgtaattgaa
     4321 atatttacat gagcattctc aattaatttt tgaagtgttt cattatcagg gtttgcaaca
     4381 agctcaatat tctgttcatc tgccaacctg ttttttaact gtcttggagg attgagtcct
     4441 gctattttta gaggaacatc aagttcatta aaaacctgat ctagtaagaa atttacagca
     4501 ttttcatttt cggcaactga tagattgcca tgatacaaca cgtactcacc tttgccaagt
     4561 ttacacttca cctctttaaa agggtgaaat gccggaatat aatcaa
//
LOCUS       DASCQP010000157         5572 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000638808, whole genome shotgun sequence.
ACCESSION   DASCQP010000157 DASCQP010000000
VERSION     DASCQP010000157.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 5572)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5572)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5572
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000638808"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..335)
                     /locus_tag="QF480_02630"
     CDS             complement(<1..335)
                     /locus_tag="QF480_02630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05489.1"
                     /translation="MKYLFLIPTLFVLVIFSSCVNADHSHSHDADSHNKDSNNIPDTT
                     THYPQEKHLANVKQLTNGGDNAEAYFSFDNSMIVFQAKVPEWGSACDQIYYFPFSDIN
                     MKNSMPQIL"
     gene            complement(455..3271)
                     /gene="uvrA"
                     /locus_tag="QF480_02635"
     CDS             complement(455..3271)
                     /gene="uvrA"
                     /locus_tag="QF480_02635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005814903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HJN05490.1"
                     /translation="MSSAGNTYISIIRSRVNNLKNLSVSIPKKRLVVITGLSGSGKSS
                     LAFDTLYAEGQRRYVESLSSYARQFLGRMDKPEVDAINGIAPAIAIEQKVKSRNPRST
                     VGTSTEIYEYIKLLFGRIGKTYSPVSNKQVKRHKVSDVTNYIMGLPENTDVIIYAKLH
                     ISAKRKLNQHLQVLMQQGFNRVLKDGKISRIEDVIATVSDSEKPNNYFLVIDRVRVDH
                     NDEDFESRVADSTQIAFYEGNGNCSISYKIKDKEITHEFSNKFERDGIIFEEPSVNMF
                     TFNNPFGACKRCEGFGSIIGIDPDLVIPNPRLSVFDEAIACWKGEKMSEWKNQLIKSA
                     LKFNFPIHRPYYQLTEDQKELLWTGNEYFDGINAFFNSVEEQTYKIQYRVMLARYRGK
                     TKCPECKGTRLRKDTNYVKIGGLSINDIVQLQLDEAYNFFYNLKLDQYDNSIAGRILF
                     EITNRLKFLIDVGLFYLTMNRLSSSLSGGESQRINLATSLGSSLVGSMYILDEPSIGL
                     HPRDTERLVDVLYRLRDLGNSVIVVEHDEEIIKASDQIIDIGPDAGEHGGKLVFQGEF
                     DDLAKNNESYTALYLTNRKKIELPRRRRKWKNYVEIVGATQHNLKNISVKLPLNVLLV
                     ITGVSGSGKSTLVKDILYPAIKKQLDGYSGKAGRFGYLSGELKNISAIEYVDQNPIGR
                     SSRSNPVTYLKAFDDIRTLFASQKLAKLRGYKPGYFSFNVPGGRCDECEGEGVIKVEM
                     QFMADIYLKCDSCNGHRYKDEVLEITYKGKNISDILNMTVEQALDFFEKSKELGNTGM
                     KIINKIVPLSDVGLGYLHLGQPSNTLSGGEAQRVKLAYFLSKGNIDSPTLFVFDEPTT
                     GLHVHDISKLLVSLNSLIEIGHSIIVIEHNSEIIKSADWIIDLGPDGGENGGKLIFEG
                     TPDDIINCSKSYTGKYLRDKILRK"
     gene            3438..4025
                     /locus_tag="QF480_02640"
     CDS             3438..4025
                     /locus_tag="QF480_02640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009133915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HJN05491.1"
                     /translation="MGLAAISEKELVQSFINGNHSSLQTLIERHQNRLYSYIFLLVKD
                     KQLADDIFQDTYVKVINTLKRGSYNDEGKFIQWVMRIAHNLVIDHFRKSKKVPTVENS
                     YNEFDVFDTISFTDPSIEEQLVKTQIHSDVRKLLDFLPEEQKEVLYLRCYSGLSFKDI
                     AEHTDVSINTALGRMRYAIINMRKIIEEKKVVLTA"
     gene            complement(4439..5500)
                     /locus_tag="QF480_02645"
     CDS             complement(4439..5500)
                     /locus_tag="QF480_02645"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013775.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside phosphotransferase family
                     protein"
                     /protein_id="HJN05492.1"
                     /translation="MISSKILYRFFPDCEITDVVKYGDGHINNTYLISTNKRKFILQQ
                     VNRNVFNINNLVHNYINLIRALSEQGALGKFFPIFIPDNSGSIHYVDTAGSAWRANEF
                     IEDYSTYEISPSTSITENAGKAMGKFQLFLTKLNSKDFKDTIPDFHNPLRRLNEFQYA
                     LKNADVDLKKVAENEINFALDNKSIAKEMSYLLKSTLLPERITHNDTKLENFLFSTTS
                     HNTYVIDLDTVMSGSLLFDFGDMVRSITSIAKEDEKDLSKVTFRMDHFEALCRGYLGE
                     LKNIITTTEKEQLLSGALCIIYIQGLRFLTDYISGNKYYKVAYPTHNLIRCRTQFKLL
                     EDILMYSDELTDKIYSVLQ"
BASE COUNT         1742 a          989 c          903 g         1938 t
ORIGIN      
        1 ctaagtattt gaggcatgct atttttcatg ttgatatcgc taaaagggaa ataataaatt
       61 tgatcgcatg cgctgcccca ttcaggtacc tttgcctgaa atacaatcat cgaattatcg
      121 aaactaaaat atgcttcggc attatctccg ccattggtta attgttttac gtttgccaag
      181 tgtttttcct gtggataatg agtagttgta tctggaatat tattagagtc cttattatgt
      241 gaatcagcat catgtgaatg agaatgatca gcgtttacac atgaggaaaa gataacaagg
      301 acaaataaag taggaattaa gaataaatat ttcatttgga ataatttaca ttaataaatg
      361 tgcaaaaata ttaatttaat taacaaagta actacgataa attcaacgga atgtgatgaa
      421 gtacaacgct aaagaattcc ccagaatctt ttaattattt ccttaagatt ttatctctca
      481 aatatttacc ggtatacgac ttgctgcaat taattatatc gtcgggtgtt ccctcaaata
      541 ttaatttacc accgttttca cctccatcag gaccgaggtc gattatccag tctgcagact
      601 ttataatttc agagttatgt tcgattacaa tgatcgaatg tccaatctct ataagtgaat
      661 tcaacgaaac caataactta ctaatatcgt gcacatgtaa tccggtagtg ggctcatcaa
      721 aaacaaaaag ggtaggggaa tctatgttgc ccttggatag aaaatatgca agtttaaccc
      781 gttgtgcctc tccaccgctg agagtgtttg atggttggcc cagatgaaga tagcctaacc
      841 caacatcgct aagaggtact atcttattaa ttatcttcat tcctgtattc cccagttctt
      901 ttgatttctc gaaaaaatct aaagcctgtt caacagtcat attcaggata tcggaaatgt
      961 tcttgccttt atatgttatt tcaagaactt catctttata cctatggcca ttacatgaat
     1021 cacatttaag ataaatgtcg gccatgaatt gcatctctac cttaattaca ccttctcctt
     1081 cgcattcgtc acaccttcct ccaggtacat taaacgaaaa ataacctggt ttataaccac
     1141 gaagttttgc cagtttttga gatgcgaaca aagttcttat atcatcgaat gcttttaaat
     1201 atgttaccgg atttgaacgt gaagatcgac caatcggatt ttgatctaca tactcaatag
     1261 ctgaaatgtt tttcaattca ccagaaagat agccaaagcg tcctgctttt ccactgtatc
     1321 catctagttg tttttttata gcgggataaa gaatatcttt aacaagagtg gatttacctg
     1381 aaccacttac tccagtaata actaacaaaa cattgagagg caatttaaca gaaatatttt
     1441 tcaggttatg ttgtgtagcc ccaacaattt caacataatt tttccacttt cttcttcggc
     1501 gtggtaattc aattttcttt ctatttgtta aataaagagc agtataactt tcgttatttt
     1561 tcgccaaatc atcaaattca ccctgaaata ccagtttgcc accatgttct cccgcatctg
     1621 gcccaatatc aattatttga tctgaggctt taataatttc ctcgtcatgt tcaacaacaa
     1681 ttactgaatt acctaaatct cgtaatcgat ataatacatc cacaagacgt tcagtatcac
     1741 gaggatgcaa accgatactt ggctcatcaa gaatatacat ggaaccaact aaactgctcc
     1801 caagtgaagt tgcaagatta atccgttgcg actctccacc agataatgat gatgatagtc
     1861 tgttcattgt caagtaaaaa aggccaacat caattaaaaa ttttaaacgg tttgtgattt
     1921 caaaaagtat tcgtccagct atactattat cgtattggtc taatttcaag ttgtagaaaa
     1981 aattatatgc ttcatccagc tgcagttgaa caatatcatt tatactaagg cctcctattt
     2041 taacatagtt agtgtctttt cttaatcttg tacccttgca ttccggacat tttgttttgc
     2101 ctctataccg agcaagcata acacgatatt gaattttata tgtttgttct tcaaccgagt
     2161 tgaagaatgc gttaatccca tcgaaatatt cattacctgt ccacaacagt tctttttgat
     2221 cttcagttag ttgataatag ggtctatgta tagggaagtt aaactttaga gcacttttga
     2281 ttagttggtt cttccattcg ctcatttttt cacctttcca acaggcgatt gcttcatcaa
     2341 aaacagacaa ccgtggattc ggtatcacca ggtcgggatc aatacctata atactaccaa
     2401 aaccttcaca acgtttacaa gccccaaaag gattattaaa tgtaaacatg tttactgatg
     2461 gctcttcaaa gattattcca tcacgctcaa acttatttga aaattcatgt gttatttcct
     2521 tgtcttttat tttgtatgaa atagagcaat taccattacc ttcgtaaaaa gcaatttgag
     2581 ttgaatcggc aacacgggat tcgaaatcct cgtcattatg gtcaaccctg actctatcaa
     2641 tgactaaaaa gtaattgttt ggtttttccg aatcacttac ggttgcaatt acatcttcaa
     2701 ttctgctaat tttcccgtct ttcagtactc tgttaaagcc ttgttgcata agtacttgta
     2761 gatgttgatt gagtttcctc ttagctgaga tatgtaattt cgcataaata attacatcag
     2821 tattttcagg taatcccatg atgtagtttg ttacatctga tactttatgc cgttttactt
     2881 gtttgttgga aactggggaa tatgtttttc ctatccttcc aaagagtagc ttaatatatt
     2941 cgtatatctc agtagaagta ccaacagttg accttggatt tctacttttt accttttgct
     3001 caattgcaat ggctggagca atcccgttta ttgcatcaac ctcgggcttg tccattctcc
     3061 ctaggaactg acgagcatag gaactaagac tttctacata tcgtctctgt ccctcagcat
     3121 ataatgtatc gaacgcaagc gatgatttac ctgaacccga caaacccgtt attacaacca
     3181 atcttttttt gggaatggaa acgctaagat ttttaaggtt gttaaccctt gatcttatga
     3241 tagatatgta agtatttccg gcggaactca tttaaattat atacttatgt ttgtaaaaat
     3301 agtgtgcaaa attagaactt tatttgcttt tttggatata aggcttatat ttgcattatt
     3361 gtttaactaa cctctaggag aaagattatc gattaaactc tactattttt ttgtatcatt
     3421 aacataaaat aggtaaaatg ggtttagctg ctataagtga aaaggaactt gtacaaagtt
     3481 tcattaacgg taatcactcc agtcttcaaa ctcttatcga acgccatcaa aacaggttgt
     3541 attcgtacat ctttttgttg gttaaagata agcagttggc tgatgatatt tttcaggata
     3601 catatgtaaa agttattaat accctaaagc gtggtagcta taatgatgag ggtaaattta
     3661 ttcagtgggt gatgcggata gcacataatc tggtaattga ccatttcagg aaatctaaaa
     3721 aagtccctac tgttgaaaat tcttataacg aatttgatgt ttttgatacc attagcttta
     3781 ccgatccttc gattgaagag cagctggtaa aaacccaaat acatagtgat gttcgcaaac
     3841 ttttagattt cctgcctgag gaacaaaaag aagttctgta tttaagatgt tattcgggtt
     3901 taagttttaa agatatcgct gaacatactg atgttagtat taatacagct cttggccgga
     3961 tgcgttacgc aattataaat atgcgtaaga ttattgaaga aaagaaggtt gtacttactg
     4021 catagttgaa atagagccag aatagttagt tgaatactat ctaaagcgcc aggataattt
     4081 agaaatttcc atatttttta gggaagatta ggtttttagt tgattcagat aataattgaa
     4141 aagttttgcc gttactttta taattatttg tctcatttat aaactgccta tgataagttt
     4201 tactccgcaa gaacatcagg attccccaca aactaaacta aatgatggtg tgtgcacttc
     4261 tccgtcaaaa ttaacgatca gaattatagt gagttatgct tccgcactaa gagtgtataa
     4321 aacaaaaagc ctggggttta caaatatcct gttaaattaa gttttccttt ttgaagctat
     4381 actaaagctg cgatcttcat aggttgcagc tttttgtttt cagcacccat tttaagaatt
     4441 attgtaaaac cgaataaatt ttatccgtta attcatcact atacattaga atatcctcta
     4501 atagtttaaa ttgagtacga catcttataa gattatgcgt tggataggca actttgtaat
     4561 atttattacc acttatataa tcagtcaaaa atctgagacc ctgaatgtaa attatgcaaa
     4621 gagctcctga taatagttgc tctttttcag ttgtggtaat tatattcttc aattccccta
     4681 aatatcctct gcaaagagct tcaaaatgat ccattctgaa agtaaccttg cttaaatctt
     4741 tttcatcttc ttttgctata ctagtaattg atcgaaccat atctccaaaa tcaaatagta
     4801 gactgccact cataacagtg tcaaggtcaa tcacataagt gttgtgacta gtggtgctaa
     4861 acaaaaaatt ttcaagtttg gtatcattat gtgttattcg ttcaggtagt aaggtacttt
     4921 ttagtagata tgacatttct tttgcgatag acttattatc tagtgcaaaa ttaatttcat
     4981 tctctgcgac tttttttaaa tctacgtcgg catttttaag tgcatattgg aattcattta
     5041 gtctccttaa aggattatga aaatcaggta tcgtatcttt gaaatccttc gagttcaatt
     5101 ttgttaagaa taactgaaat ttccccattg cttttcctgc attttcagta attgatgtac
     5161 ttggagaaat ttcataggtt gaataatctt caataaactc gtttgctctc catgctgaac
     5221 cagcagtatc tacataatga attgaaccag agttatctgg tataaaaatt ggaaaaaatt
     5281 tacctaaagc accttgttct gataaggctc tgatcagatt tatataatta tgaacgagat
     5341 tatttatatt aaaaacgttt ctgttaacct gttgaaggat gaacttcctt ttatttgttg
     5401 agataagata agtattgttg atatgtccat caccatattt aacaacatca gtgatttcac
     5461 aatcaggaaa aaacctgtat agtatttttg agctgatcaa tggtgctgaa ttttaattga
     5521 attaagtttt gtattcttaa gcccacaagt tggcagggta aactccttgg tt
//
LOCUS       DASCQP010000158         1979 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000641651, whole genome shotgun sequence.
ACCESSION   DASCQP010000158 DASCQP010000000
VERSION     DASCQP010000158.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1979)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1979)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1979
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000641651"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..733)
                     /locus_tag="QF480_02650"
     CDS             complement(<1..733)
                     /locus_tag="QF480_02650"
                     /inference="COORDINATES: protein motif:HMM:NF013706.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HJN05493.1"
                     /translation="MKTWIHVPENSDFPIQNIPFGIIKPNGKTPRPATRIGDTVIDLS
                     GLTDFGYFDILEIDNFGVFYSPVLNDFMELGPDILSAVRQQLSDLFNINNNELRENEK
                     ARKVCLHKLEDVEMIMPVDVGDYTDFYSSYEHATNIGMMFRDPDNALLPNWRHIPVGY
                     HGRSSSIVVSGTNIHRPMGQTKSDDSEVPEFGPSKLVDFELEIAFITGRSSKLGQHIT
                     VDEASEYIFGLVLFNDLSARDIQKWE"
     gene            complement(850..1950)
                     /gene="hppD"
                     /locus_tag="QF480_02655"
     CDS             complement(850..1950)
                     /gene="hppD"
                     /locus_tag="QF480_02655"
                     /EC_number="1.13.11.27"
                     /inference="COORDINATES: protein motif:HMM:TIGR01263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003868 - 4-hydroxyphenylpyruvate
                     dioxygenase activity [Evidence IEA];
                     GO_process: GO:0006559 - L-phenylalanine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0006572 - tyrosine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylpyruvate dioxygenase"
                     /protein_id="HJN05494.1"
                     /translation="MESKSSSLPINETDYIEFYVGNAKQAAHYYQSAFGFQPVAYAGL
                     ETGLTDRTSYVVRQDKITFVLTAALTPNSDVAHHHKLHGDGVKVIALWVDDARKSFKE
                     TTEKGAEPYFEPKIEFDEKGEVVLSGIKTYGDTVHIFVERQNYNGSFLPGFTDWEPEF
                     QPKETGLMYVDHIVGNVGWNEMDKVAAYYSDVMGFKQLISFDDKDISTEFTALKSKVM
                     ANDNMRVKFPINEPAKGLRKSQVEEYLDFYKGPGSQHVALATNDIVSTIQELRARGVD
                     FLHVPDTYYDSILDRVGEIEEDIEVLRNHHILIDRDDKGYLLQLFTKPVEDRPTFFFE
                     IIQRKNAISFGKGNFQALFEAIELEQQSRGTL"
BASE COUNT          609 a          383 c          308 g          679 t
ORIGIN      
        1 attcccattt ttgtatatca cgagcagata ggtcgttaaa tagtacgagc ccaaatatat
       61 attcactcgc ttcatcaact gttatgtgtt gccccaattt tgaacttctt cctgtaataa
      121 atgctatttc cagttcaaaa tctaccaact tcgatggacc gaattcaggt acttccgaat
      181 catcagattt ggtttgcccc attggcctgt gaatatttgt tccagaaaca actattgaag
      241 agcttcgtcc atgataacca accggtatat gcctccaatt tggtaacaat gcattatcag
      301 gatcacggaa catcatacct atatttgtgg catgttcata gctagaataa aaatctgtat
      361 aatcgccaac atcaacaggc ataatcattt caacatcttc aagtttatgt aagcaaactt
      421 ttcttgcttt ttcattttcc ctaagttcat tattgttaat attgaagagg tcagaaagtt
      481 gttgcctgac tgcagacaaa atatcaggac caagctccat aaaatcgttt aatactggcg
      541 aataaaaaac accgaaatta tcaatttcaa gaatgtcaaa atacccaaaa tccgttaatc
      601 ctgaaaggtc gattactgta tcacctattc ttgttgcagg gcgaggggtt ttaccattag
      661 gtttgataat cccaaatgga atattttgaa ttggaaagtc actattttct ggaacgtgaa
      721 tccaagtttt caatttaggg ttattggctt ttatcattta tcctgttaaa tatcaataga
      781 ttaaaaagta tttttaataa ggttgcagac gtattgagac cttagagtgc cgaaagttaa
      841 ttaaatatgt tataatgttc cacgactttg ttgttctaat tcaatagcct caaataatgc
      901 ctgaaaattt ccttttccaa acgatattgc attttttctt tgaataattt caaaaaagaa
      961 agtgggacga tcttcaactg gttttgtaaa cagctggagt aaataacctt tatcatcacg
     1021 atcgattaat atatgatgat ttcttagtac ctctatatct tcttcaattt ccccaactct
     1081 atcaagaata ctatcataat atgtatcagg tacatgtaaa aaatctacac ctcttgctcg
     1141 caattcttga attgtcgaaa caatatcatt ggtagcaagg gcgacatgtt gagatcccgg
     1201 acccttataa aaatcaagat attcttcaac ttgtgatttt ctaagaccct ttgctggttc
     1261 gttaatagga aacttaactc tcatattatc gttagccatt actttgcttt taagggcagt
     1321 aaattctgtt gaaatgtcct tatcatcgaa tgagataagt tgtttgaatc ccataacatc
     1381 actataatat gctgcaacct tgtccatttc attccagcca acgtttccaa caatatgatc
     1441 aacatacata agtcctgttt cttttggttg aaactcaggt tcccagtctg taaaaccagg
     1501 taaaaaagat ccattataat tctgcctttc aacaaatata tgcacagtgt ctccataggt
     1561 tttaatcccc gacagtacaa cttcaccttt ttcatcgaac tcaatttttg gttcaaaata
     1621 tggctcggcg cctttttcag ttgtttcttt aaaagatttt ctggcatcat caacccaaag
     1681 tgctattacc tttactccat cgccatgtaa tttatgatgg tgagctacat cagaattagg
     1741 tgttaaggct gctgttagga caaaagttat tttatcttgc cgtaccacat atgatgttct
     1801 gtctgtgaga cctgtctcta gaccggcata tgccacaggt tgaaatccga aagcagattg
     1861 gtaataatga gctgcttgtt tcgcatttcc tacataaaac tctatataat cagtttcatt
     1921 tattggtagg ctactagatt tactttccat ctttatagat aatgtttaaa tacttaaat
//
LOCUS       DASCQP010000159         3424 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000646230, whole genome shotgun sequence.
ACCESSION   DASCQP010000159 DASCQP010000000
VERSION     DASCQP010000159.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3424)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3424)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3424
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000646230"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..458)
                     /locus_tag="QF480_02660"
     CDS             complement(<1..458)
                     /locus_tag="QF480_02660"
                     /inference="COORDINATES: protein motif:HMM:NF014898.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HJN05495.1"
                     /translation="MTIDTFINYIANEKRYSSHTLKAYKTDLELFTTYLNDEFEIDDP
                     VNANQEMIRSWIVQMIDKGLSGKSVNRKISTLNSYYNYLIKMSHLNDNPARHIVSVKT
                     PERLPVYFNEEQLNELLDTNSRAKGFAKLRNMLVVELLYSTGMRRSELVTL"
     gene            complement(628..822)
                     /gene="rpsU"
                     /locus_tag="QF480_02665"
     CDS             complement(628..822)
                     /gene="rpsU"
                     /locus_tag="QF480_02665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006045671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HJN05496.1"
                     /translation="MIIIPVKEGENIDRALKRFKRKFEKTGAMRELRARQKFDKPSVV
                     RREEKLKAIYVQGLRQAEMG"
     gene            complement(1082..3295)
                     /locus_tag="QF480_02670"
     CDS             complement(1082..3295)
                     /locus_tag="QF480_02670"
                     /inference="COORDINATES: protein motif:HMM:NF013123.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HJN05497.1"
                     /translation="MKKSELLILLALLISSTSGFGQDTLKNITLKEIWTDYSLMSRSV
                     RGIKSLKNGKDYTRIKKGSIVVYDYLTGDSVTALVIASGLVVDSSENPVRIGSFSMNV
                     DEDMFLIPTQRESIYRHSYKADYFIWNKDKSTLTPLSAHGKQQLANFSPSGNNVAFVR
                     DNNIFIKDLASGNEKKITTDGIRNHIINGTCDWVYEEEFGVAKAYFWSPDGSRIAYYR
                     FDESNVKEYTITNYGNLYPDWETYKYPKAGEDNSLVEIYVYELATGITTKMDIGNETD
                     QYIPRIKWTNSSNILAIQRLNRLQNHLDILLADASSGNSDIMYSEDNDYYVDVTDNLT
                     FLSDNKYFIMTSEADGYNHIYLYNIDGSLKEQLTNGNWDVTRVYGFDRDNKYVYYQSA
                     ESSPLNRDIYRVNLKGKKTKISQKEGTNRASFSKNYKYFINNFSTIETPPVYTVNLAN
                     GKEVRIIEDNSKLREKLTRYRISKPEFFTFSTPEITLPDSSVVELNAWKILPYDFDPA
                     KKYPVLLTIYGGPGSQSVVNAWGSINYLWYEMLAENGIMIISVDNRGTGARGEVFKKM
                     TYLELGKYETLDYIETAKYLSSLPYVNKDKIGIFGWSYGGFMASNALFQGSEYFNTAI
                     AVAPVTSWRYYDNIYTERFMRKPQDNPEGYDNNSPINHVEKLKGNYLLVHGGADDNVH
                     PQNTMDLLSALVKADKQFDFMLYPSKNHGIYGGNTRYHLFKKMTDFLYKNLKDCN"
BASE COUNT         1056 a          663 c          515 g         1190 t
ORIGIN      
        1 agtgtcacaa gctcgcttct tctcattcct gtcgaatata ataattcaac caccagcatg
       61 ttacgcaatt tggcaaaacc cttcgctcga gagttggtgt ctagtaactc gtttaattgt
      121 tcttcattaa aatataccgg taaacgttca ggcgttttaa ctgatacaat atgccgtgcc
      181 ggattgtcgt ttagatgcga cattttgata aggtaattat aataagaatt aagagtgctg
      241 atctttcgat ttaccgattt tcctgacaaa cctttatcaa tcatttgaac tatccatgat
      301 ctaatcatct cctgatttgc attgacaggg tcgtcaattt caaattcgtc attaagatat
      361 gttgtgaata attcgagatc tgttttgtag gccttcaagg tgtgagatga ataccttttt
      421 tcgtttgcga tataatttat gaaggtatct attgtcatca atactgaaag aaatcagatt
      481 tacaaatttc tagctcttgc tgtttgcccc taattaaatt acaatgtagt gtaacaaaaa
      541 aagaagaaac tctgtgttca aaagtactaa aaaatacttc aaaaacaaaa tttcttctta
      601 aatatttccc ttttgagact aaattaatta gcccatctca gcctgacgaa ggccttgcac
      661 gtaaattgct ttgagtttct cttctcttct caccactgat ggtttgtcga atttctgacg
      721 agcacgcaat tctctcattg cacctgtctt ctcaaattta cgtttgaacc ttttcaaagc
      781 tctgtcaata ttttcacctt cttttaccgg aatgatgatc atattatacc tactttcttt
      841 tttaaattaa ttattaataa gggacggcaa aaataatagt ttttttgtta ttgactaact
      901 acgaattatt tttttataaa actcgtcctc gtttgtaacg aggatgaaat ctcatcagaa
      961 ctataataaa cctgaatctc cttaagcaat acaacttatt tagaaatacg tcctcgttac
     1021 aaacgaggac gattggatgg atataactaa tggcttttgg ctattaacta attactaaca
     1081 gctaattgca atcctttaaa ttcttataaa gaaaatcagt catcttttta aacaagtgat
     1141 aacgtgtgtt acccccatat attccatgat tcttactcgg gtaaagcatg aaatcaaatt
     1201 gtttgtccgc cttaaccaaa gccgataaca aatccattgt attttgcgga tgcacattat
     1261 catcagcacc accatggacc agtaaataat tacctttaag cttttctaca tgattaatag
     1321 gtgagttatt atcatagcct tctggattat cctgaggctt acgcataaat ctctctgtgt
     1381 aaatattatc gtaatatctc cagctagtaa ctggtgcaac agctatagca gtattgaaat
     1441 attcagagcc ttgaaacaaa gcattactgg ccataaagcc tccgtagctc cacccaaaaa
     1501 tcccaatctt atctttatta acatatggaa ggctgctcaa atacttggct gtttctatgt
     1561 aatccagtgt ttcatattta cctagctcta aatatgtcat tttcttaaac acttcacctc
     1621 tggcaccggt tcctctatta tcaacagata tgatcattat cccattttca gcaagcatct
     1681 cgtaccataa ataattaata ctaccccacg cattaaccac tgactgagat ccgggacctc
     1741 catatatggt taggagtaca gggtatttct tcgcaggatc aaaatcatat ggcaagatct
     1801 tccaagcgtt tagttcaact acgctactat caggtaatgt gatttcaggt gtactaaatg
     1861 taaaaaattc tggcttactg atcctgtatc ttgtaagttt ctcgcgcaac ttagaattgt
     1921 cttcaataat ccttacttct ttaccgttag ctaaattaac ggtatataca ggtggtgttt
     1981 caatagttga gaagttgttt atgaaatatt tgtaattctt actaaatgat gccctattag
     2041 ttccttcctt ctgagatatc ttagttttct ttcccttgag attaacccta taaatatctc
     2101 tattgagtgg cgacgattca gccgactgat aataaacata cttattatcc ctatcgaatc
     2161 catatactct tgtcacatcc caattaccat tagtaagttg ttctttaagg ctaccatcta
     2221 tattgtataa gtatatatga ttataaccat ctgcctccga agtcattata aaatacttat
     2281 tatcagataa aaaagtgaga ttatctgtaa catctacata gtaatcatta tcctcgctat
     2341 acattatgtc gctattgcca gaggatgcat cagcaagaag aatatcaaga tggttttgca
     2401 aacgatttag tcgttggatt gctagaatat ttgagctgtt tgtccactta attcgtggaa
     2461 tatattgatc tgtttcatta ccaatatcca tctttgtagt gatacctgtg gccagttcat
     2521 aaacataaat ctcaaccaga gaattatcct cgccggcttt cggatattta taagtttccc
     2581 aatccggata caaattacca taatttgtta ttgtatattc ttttacgtta ctttcatcga
     2641 aacgataata tgctatcctg ctgccatcag gcgaccagaa gtaggctttt gcaaccccaa
     2701 actcctcttc ataaacccaa tcacatgtac cattaatgat atggttccgg atgccatccg
     2761 tagttatttt tttctcatta ccagaggcaa gatccttaat aaaaatgttg ttgtcacgga
     2821 caaatgctac attattgcct gatggagaga aatttgctaa ttgttgcttt ccatgggctg
     2881 acaaaggcgt gagtgtactt ttatctttat tccaaataaa ataatcagct ttatatgaat
     2941 ggcgataaat tgattctctt tgtgtaggga ttaaaaacat atcctcatca acattcatac
     3001 taaatgaacc tattctaaca gggttttcac tactatcaac aacaagcccg ctggcaatca
     3061 caagtgcggt gactgaatcg ccagtaagat aatcataaac aactattgat ccctttttga
     3121 tccgggtata atcctttcca ttttttaacg atttaatacc ccttactgat ctagacatta
     3181 aactataatc cgtccaaatt tcttttaatg taatgttttt tagagtatcc tgtccgaaac
     3241 ctgatgtact tgaaattaat agtgctaata gaattaataa ttctgatttt ttcatgtgta
     3301 tataattcgt taaatgtttt aatttcaatt aattaaaaaa tcaagtttaa gagattaaat
     3361 tttcatgtgc gtactccctt cttaaaaaaa gaaatggtaa caacggttgg tgcttaaact
     3421 tgag
//
LOCUS       DASCQP010000160         3634 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000647600, whole genome shotgun sequence.
ACCESSION   DASCQP010000160 DASCQP010000000
VERSION     DASCQP010000160.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3634)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3634)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3634
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000647600"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..760)
                     /locus_tag="QF480_02675"
     CDS             complement(<1..760)
                     /locus_tag="QF480_02675"
                     /inference="COORDINATES: protein motif:HMM:NF024910.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HJN05498.1"
                     /translation="MPEHTKKVGFLGLAAIVVGSMLGGGVFNLPSNMSEGAALGAVLI
                     AWIITGIGMFFLAQTFKILSDTRPDLSSGIYTYAAEGFGKYIGFNSAWGYWLSAAIGN
                     VSFAVLMMQALGYFFPVFLSGNNWQSILGGSILIWSMNIIVRRGVNGAAILNVVSTIA
                     KLVPLFIFVIVLLFVFNWDKLTFDIWGNLDDNLGSLPKQIKSTMLVTLWAFVGIEGAV
                     VISGRAKNKKDVGKATFIGFLGAIIIYAAISIFSF"
     gene            complement(1051..2733)
                     /locus_tag="QF480_02680"
     CDS             complement(1051..2733)
                     /locus_tag="QF480_02680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05499.1"
                     /translation="MKIPLNKFEQIIDEKILKRGLSYFKGGAITDVAEISTGEYEAIV
                     SGTEEYTVHLEISNNIITEHNCDCPYDMGAVCKHVVAVIFHLQQEELALNQPNFIIPK
                     EKKTKSVSQQVKELLQAISHKELIDFVQENSKKDKKFRNYFLASFGHLSQSQSKEFYK
                     KQIHSILQTATGRDGWIDWSGMKYVVNTTQPFLENAEKYLTNNNFENVFFISTALLEE
                     MTEAFQYGDDSNGDLGYFVESAMELLSKLTQEKLPNTLKEEISEYCIASFNQKLFHGW
                     DWHLGMLHIACKLIEKEDDADIILSCLDTINGEYERERAQSFKLDLLRKFKDEKEVEM
                     YINKHISNSSIRTKEIEKAFESKNFDRVIKLSNDGIICDEIDKPGLVKVWYNWLLKVA
                     QAEKDASKIITYARFLFIDNFHPEQDYYQILKENIEDNNWHHFLEEIIKEITPKNRWT
                     YTELIRKIYINEEWWDRLFLMLKQNLSLENIQHNEQYLVHDYSSELIELYSERIMNYV
                     EKFVGRNHYQTACRYLRRMKKLGGNEQVNDLTELFRKKYPKRKALMDELNQV"
     gene            complement(2736..3539)
                     /locus_tag="QF480_02685"
     CDS             complement(2736..3539)
                     /locus_tag="QF480_02685"
                     /inference="COORDINATES: protein motif:HMM:NF013704.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006306 - DNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA methyltransferase"
                     /protein_id="HJN05500.1"
                     /translation="MEIKTFNELYTHEKIFDFPKPVEVIKKCILISSNNNDIVLDFFA
                     GSGTTGHAVTELNQEDGGNRKYILVQLPEAIDEKSEACKAGYKRISDITIERNKRVIE
                     KIIEEKKNEHPDLFSGDKKEETLQGLGFKVFKLVKSNFPRVEFAPDPEKTEEENIELL
                     KKYISDKEAQLVSAFNRDELITEILIKNGFKLNYSLTKQEEFKKNEILFATDGDKETL
                     ICLDVIIADETVEYFKSNTDKKLVVLERALDTTKKWNLKHYMGEKFKAF"
BASE COUNT         1090 a          689 c          515 g         1340 t
ORIGIN      
        1 caaaagaaaa aatacttatt gccgcataaa ttattatcgc acccagaaaa ccgataaatg
       61 ttgctttgcc aacgtctttt ttatttttag ctcttccgga tataacaact gcgccctcaa
      121 tcccaacaaa agcccacaaa gtaactaaca tagtactctt tatctgcttt ggcaggctgc
      181 ccagattatc atctaaatta ccccaaatat caaatgtaag cttatcccaa ttaaagacga
      241 aaagaagaac tattacaaaa ataaaaagtg gaacaagttt agctatggtg gaaactacat
      301 ttaatattgc agctccattt acacctcttc tgacaataat attcatactc catatcaaaa
      361 ttgaaccacc caatatcgat tgccaattat tgcctgataa aaaaacaggg aagaaataac
      421 caagggcctg catcattaga actgcaaaag atacgttacc aatagcagca cttaaccaat
      481 aaccccaagc tgaattaaat ccaatatatt taccaaaacc ttcagcggca taggtgtaga
      541 tgcctgaact tagatcgggt cgggtatcac ttaatatttt gaatgtttgc gcaagaaaaa
      601 acattccaat acctgtaata atccatgcaa ttaacactgc cccaagtgca gcaccttccg
      661 acatgtttga tggtaggtta aaaacgccac caccaagcat tgatccgaca acaatagccg
      721 ctaatcctaa aaagccgact tttttcgtgt gttcgggcat ataattttct atttatttta
      781 atctaatatc aattagttta acaatggtac tagcccattt cggtttacct atgcatagta
      841 agggtttccg aagcacttca ctttcaatct tacccgatgt taatattaaa tgcatattct
      901 attttactac taaatcctgc attacgtatg agtcttccca ctggctgttt cttctgtcag
      961 cgttggcaaa ggtatactta ttgacaaggc ttggttcgtg cggttggctt gcagcgactt
     1021 ggcaatgtgt agggcttttg gggttggcat ttacacttgg tttagctcat ccattaatgc
     1081 ttttctctta ggatatttct ttctgaataa ttcagttaaa tcatttacct gttcatttcc
     1141 tccaagtttt ttcattctcc gtaaatatct gcaagcagtt tgataatggt tccgtccaac
     1201 aaatttttca acataattca taattctttc actatataat tcaataagtt ccgaagaata
     1261 atcgtgtact aaatactgtt cattatgctg aatattctcc aaagaaagat tctgttttaa
     1321 cattagaaac aacctatccc accattcttc attgatataa attttccgaa ttaattccgt
     1381 atatgtccat ctgtttttag gtgttatttc ttttattatt tcttctaaaa aatgatgcca
     1441 attattatct tcaatattct cttttagaat ttgataataa tcctgttcgg gatgaaaatt
     1501 atcaataaat aagaatctgg cataagtgat gattttagat gcatcctttt cagcttgagc
     1561 gacttttagc aaccaattgt accaaacttt aaccaaacct ggtttatcta tttcatcaca
     1621 tataattccg tcatttgaaa gtttaattac tctatcaaag tttttgcttt caaatgcttt
     1681 ttctatctct ttcgttctta ttgatgagtt tgaaatgtgt ttgttgatgt acatttctac
     1741 ttctttttcg tctttaaact ttcttaataa atccagttta aaggattgtg cccgttctct
     1801 ttcatactca ccgttaatag tgtccaaaca actaagtatt atgtctgcat catcttcttt
     1861 ttcaattaat ttacaagcaa tatgaagcat tcctaaatgc caatcccatc catgaaatag
     1921 cttttggtta aaagaagcaa tacaatattc tgaaatttcc tctttcaagg tattaggcag
     1981 tttctcttgc gttaattttg agagtaactc catagctgat tctacaaaat aacctaaatc
     2041 accattacta tcgtctccat attgaaaagc ttccgtcatt tcttccaata atgcagtact
     2101 gatgaaaaaa acattttcaa aattattatt tgtcaaatac ttttcagcat tttctaaaaa
     2161 cggttgggta gtatttacaa catatttcat acccgaccaa tcaatccaac catctctacc
     2221 tgttgctgtt tgtaaaatag aatgaatttg ttttttgtaa aactctttcg attggctttg
     2281 gcttaaatga ccaaatgatg ctaaaaaata atttctgaat ttcttgtcct ttttgctgtt
     2341 ttcctgtacg aaatctatta attccttatg tgaaattgct tgcaataatt ccttgacttg
     2401 ttgtgaaacc gacttcgttt ttttctcttt gggaatgatg aaattgggtt gatttaacgc
     2461 cagttcttct tgttgtaaat gaaaaattac tgcaaccacg tgcttacaaa cagctcccat
     2521 atcgtaaggg caatcacaat tgtgctcagt tattatatta ttgctaattt ctaaatgaac
     2581 ggtgtattct tccgttcctg aaacaatggc ttcatattct ccagttgata tttctgcaac
     2641 atcagttatt gcgcctcctt taaaatatga taatcctctt ttaaggattt tttcatcaat
     2701 aatttgctca aatttgttta atggaatctt catatttaaa acgctttaaa tttctcgccc
     2761 atatagtgtt ttagattcca tttttttgta gtgtctaaag ctcgttcaag cacaactaat
     2821 tttttgtcag tatttgattt gaaatactct acggtttcat ctgcaataat tacgtctaaa
     2881 cagattaaag tttctttatc cccatcggtg gcaaacagaa tttcattttt cttaaattct
     2941 tcttgcttgg ttaatgagta attgagttta aacccgtttt tgattaatat ttcggtaatc
     3001 aattcatcac ggttgaaggc ggaaaccaat tgagcttctt tgtcactaat atattttttg
     3061 agcaattcaa tattttcttc ttctgttttt tccgggtcgg gagcaaactc tactcttgga
     3121 aagttagatt ttaccagttt aaaaaccttg aaacccaaac cttgtaaagt ttcttctttt
     3181 ttgtctccac taaacaaatc agggtgttcg tttttctttt cttctattat tttttctatt
     3241 acacgcttgt ttcgttcaat ggtgatgtcg ctgattcttt tgtagcctgc tttgcaggct
     3301 tcgctttttt catcaatagc ttcaggtaat tgaactaaaa tatattttct gtttccgcca
     3361 tcttcctggt taagttctgt tactgcgtga cctgttgttc cagaacctgc aaaaaagtca
     3421 agaacaatgt cattgttatt tgatgaaatc aaaatacact ttttaatcac ttcaactggt
     3481 tttgggaaat caaatatttt ttcatgtgta tataattcgt taaatgtttt aatttcaatt
     3541 aattaaaaaa tcaagtttaa gagattaaat tttcatgtgc gtactccctt cttaaaaaaa
     3601 gaaatggtaa caacggttgg tgcttaaact tgag
//
LOCUS       DASCQP010000161         3285 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000648734, whole genome shotgun sequence.
ACCESSION   DASCQP010000161 DASCQP010000000
VERSION     DASCQP010000161.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3285)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3285)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3285
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000648734"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1020
                     /gene="nrfD"
                     /locus_tag="QF480_02690"
     CDS             <1..1020
                     /gene="nrfD"
                     /locus_tag="QF480_02690"
                     /inference="COORDINATES: protein motif:HMM:NF015851.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NrfD/PsrC family molybdoenzyme membrane anchor
                     subunit"
                     /protein_id="HJN05501.1"
                     /translation="VMAAGLFPLIHMGRIWDGFFIFPYWNTRGPIWDNFNSPLFWDVV
                     AISTYLTASFVFWYIGMIPDFATIRETTISKVKKKIYGAMSFGWIGNARSWLRFETAA
                     LLLGGLAAPLVVSVHSIVSMDFAVSVVPGWHTTIFPPYFVIGAIFSGFGMVLTLMLVL
                     RKLYKFKDYVTDGHIEAIARILTFISLIMGSAYLIELFTAWYSGNEYELFTFMKNRVT
                     GEYTFAYWTMLTCNAIIPQFFWIKKIRKNMTLVFIISIFINIGMWFERYVIVVTSLSR
                     DFLPATWATYSPTWTEIAIFVGTLGLFVMGVISFFRWIPTIAISEVKSVLKETTTLKS
                     FTDED"
     gene            1010..1537
                     /locus_tag="QF480_02695"
     CDS             1010..1537
                     /locus_tag="QF480_02695"
                     /inference="COORDINATES: protein motif:HMM:NF023249.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3341 domain-containing protein"
                     /protein_id="HJN05502.1"
                     /translation="MKTNILGVYDDEHDVMNAVDKLQEKDIKVKDVFSPFPMHGIWEK
                     LKQTTMLPYATFLYGTVGAIGSFALLYWTSVINYPLKFGGKPLNTLSFIIIMFVLTIL
                     IGTIFTALTFFIRQKLYPGKESIMPDPRSANDKFVIVIEKTDSMGDDELNKIKSLLTE
                     SGAVEVNISYVDYEA"
     gene            1551..2132
                     /locus_tag="QF480_02700"
     CDS             1551..2132
                     /locus_tag="QF480_02700"
                     /inference="COORDINATES: protein motif:HMM:NF012264.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HJN05503.1"
                     /translation="MNSTRYLTLIVLCLVVLTSCNKSKNNPGYAYMGKNDMYYTKFYK
                     AYSPNPIFSDKMTIQLPVEGTVSRGNMPFAYPTASITDRVVNQTLAGNQLVNSVEYND
                     ESIAMGKDLYNIYCKVCHGETAAGDGHLFTSGLFPAKPTSLIDSYVQNKPDGEIYYVI
                     TAGSVSGLMAPHGAQVTPDERWMIINYLRSLTK"
     gene            2156..>3285
                     /locus_tag="QF480_02705"
     CDS             2156..>3285
                     /locus_tag="QF480_02705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05504.1"
                     /translation="MDKKVQLSKNFKVVMIILIVVGLISVAIGFLTEDGKRAWANLLL
                     NNYYFLSVAIGAIFWLAIQAVTQSGWSAAYLRIPMAMSNYFIVSMILFAIMFFGIHDL
                     YHWTHHDAVINDAILLHKKPYLNVPFFTIRYIVFFALWIYLTQRIKKLSLQEDQFGGT
                     GYFDKIEMTSKVFIFVFAVSFSLFTIDWLMSLDPHWYSTIYVVKKFIMAFFHGAAVIT
                     AIVIILHKLGYFPMLTKKHMGDFSRYIWALSLIWGYIWLSQYLLIWYANIPEETIYYI
                     PRELGEYKALFYVELIMNWAFPFFFLMWNRIAKNQNLVLFAVVVLIIGQWVELYMSIM
                     PGTVESHSISFIEIGTFIGSFGLFALVVGKSLSKLPIIPKNHP"
BASE COUNT         1005 a          514 c          633 g         1133 t
ORIGIN      
        1 gtaatggctg caggtctgtt ccctttaata catatgggac gaatatggga tggatttttc
       61 atttttccat actggaatac aagaggcccc atatgggata actttaattc tcccctattt
      121 tgggatgttg tagccataag cacctattta acagcctcgt ttgttttctg gtatattggc
      181 atgatacccg attttgcaac aatcagagaa acaactattt ctaaagtaaa aaagaaaata
      241 tatggtgcga tgagttttgg atggataggt aatgccagga gttggctgcg ctttgaaacc
      301 gctgcgctat tattaggagg tctggcggca ccacttgttg tttctgtgca ctcaatcgtt
      361 tctatggatt ttgccgtttc agtagtccct ggatggcata caacaatctt tcctccatat
      421 tttgttatag gagctatttt ttcaggattt ggtatggtgc taacgcttat gcttgtactg
      481 agaaaacttt ataaatttaa agattatgtt accgatggtc atatagaagc aatcgcgcgg
      541 atacttacgt ttatctcact tattatgggt tcggcatatt taattgaact ttttactgct
      601 tggtattcag gaaatgaata tgagctattt acttttatga aaaacagggt gactggtgaa
      661 tatactttcg cttattggac aatgctgact tgtaatgcaa ttatacctca gtttttttgg
      721 ataaagaaaa tcagaaagaa tatgacattg gtgtttataa tttcaatatt cataaacatc
      781 ggaatgtggt tcgaacgtta cgtaattgta gttacatcac tctcaaggga ttttttacct
      841 gctacatggg caacatactc accaacgtgg accgagattg caatttttgt cggaacctta
      901 gggctgtttg taatgggtgt aatttcattc ttccgctgga ttccaacaat tgctattagc
      961 gaggttaaga gtgtattaaa agaaacaaca acattaaaat cttttaccga tgaagactaa
     1021 tattcttgga gtatacgatg atgagcatga tgtaatgaat gctgttgata agttacagga
     1081 aaaagatatc aaggttaagg atgtattttc tccatttccc atgcatggta tttgggaaaa
     1141 gttaaaacaa actaccatgt taccttatgc tacgtttcta tatggtactg ttggtgctat
     1201 tggttcgttt gcattgctgt attggacatc agtaattaat taccctttga aatttggtgg
     1261 taaaccactt aacacactgt cgtttataat aataatgttt gtcctaacca tattgattgg
     1321 cactatattc acagcgttaa cttttttcat caggcaaaaa ttatatccgg gaaaagagag
     1381 tattatgcca gatccacgat cagcaaatga taagtttgtt attgtcatcg aaaaaactga
     1441 tagtatggga gatgacgaat tgaataaaat aaaatcactt ctaacagaaa gtggagctgt
     1501 tgaagtaaat atatcctatg ttgactatga agcatgaaaa aaaatatagt atgaattcta
     1561 cacgatattt aacattaatc gttctatgct tagttgtgtt aacatcttgc aacaagagta
     1621 aaaacaatcc tggttatgct tacatgggta aaaatgatat gtattataca aaattctaca
     1681 aagcctattc tccaaatcct atttttagtg ataaaatgac aatccaacta ccggttgagg
     1741 gtacagtatc aaggggaaat atgccatttg cttatcctac ggcttctatt acagacagag
     1801 tagtaaatca aactcttgcc ggcaatcaat tagtaaattc tgttgagtat aatgatgagt
     1861 caattgcgat gggtaaagat ctttataata tttattgtaa agtatgccat ggagaaacag
     1921 cagctggtga cggacattta tttacgagtg gattgtttcc tgctaagcca acttcgttaa
     1981 ttgatagcta tgttcaaaat aagcctgatg gagagatcta ttacgttata actgcaggtt
     2041 ctgtttctgg gttaatggca ccacatggcg cacaggtaac acctgatgag cggtggatga
     2101 tcattaatta tcttaggtcg ttgacaaaat aataatcaaa ttaaacaaat ctaacatgga
     2161 taaaaaagta cagctcagca agaacttcaa agttgtcatg atcattttga tcgtggttgg
     2221 gcttatttca gttgccatcg gatttttaac tgaagatgga aaaagagcct gggcgaattt
     2281 gttattgaat aattattatt ttctctcagt ggcaatcgga gcaatattct ggcttgcaat
     2341 tcaggcagtt actcagtcag gatggtctgc agcttattta cgcattccaa tggcaatgag
     2401 caattatttt attgtttcaa tgatattatt tgcaataatg ttctttggaa ttcatgacct
     2461 gtatcactgg acacatcatg atgctgttat taacgatgca atacttctgc acaaaaaacc
     2521 atatctgaat gttccatttt ttactataag gtatatcgtc ttttttgcac tgtggatata
     2581 tttaactcaa cgtataaaaa aactgtcatt acaggaagat caatttggtg ggacaggata
     2641 tttcgataag attgagatga cttcgaaggt attcattttc gtttttgctg tgtcattctc
     2701 tttatttact attgattggc taatgtcgtt agatccccat tggtatagta ctatctatgt
     2761 agttaaaaag tttatcatgg ctttctttca tggagccgct gttattactg caattgtaat
     2821 catactgcat aaacttggat attttccaat gctaacaaag aagcatatgg gtgatttttc
     2881 aagatatata tgggcattaa gtttgatatg gggttatata tggttatcac aatatcttct
     2941 tatttggtat gcaaatattc ctgaagaaac tatttattat attcctcgtg aacttggaga
     3001 atacaaagcc ttattttatg ttgaactaat tatgaattgg gctttcccat ttttcttcct
     3061 gatgtggaac agaatagcaa aaaaccaaaa tctggtgtta tttgcagtag ttgtattaat
     3121 tataggtcaa tgggttgagc tgtatatgtc gataatgcct ggaactgtcg agtcgcacag
     3181 tatctcattt attgaaatag gaactttcat tggttcattt ggactttttg ctcttgttgt
     3241 agggaaatca ttatcaaaac taccaattat tccaaaaaat catcc
//
LOCUS       DASCQP010000162         8101 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000649035, whole genome shotgun sequence.
ACCESSION   DASCQP010000162 DASCQP010000000
VERSION     DASCQP010000162.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 8101)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8101)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8101
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000649035"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..381)
                     /locus_tag="QF480_02710"
     CDS             complement(<1..381)
                     /locus_tag="QF480_02710"
                     /inference="COORDINATES: protein motif:HMM:NF014626.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA];
                     GO_process: GO:0018142 - protein-DNA covalent
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SOS response-associated peptidase"
                     /protein_id="HJN05505.1"
                     /translation="MCGRFQLSVKGKQISERFNVEVFDELYKPNYNCAPSQKLPVITN
                     DQPHSLSYFRWGLIPFWAKDPKLGYRNINTRSETISSKPSFKNAFKKRRCLIPANGFY
                     EWRKDENKTPFRIFFKNEKLFALAG"
     gene            complement(519..1298)
                     /locus_tag="QF480_02715"
     CDS             complement(519..1298)
                     /locus_tag="QF480_02715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009318366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HJN05506.1"
                     /translation="MAGFLFDNLIFGPVYSRRLGVSLGINLLPVNNKFCNFNCVYCEC
                     GWTDLSKGVKIVLPKRENFKAQLENKLKELQGTVNEPDSITFAGNGEPTIHPDFAEII
                     NDTIEVRNRYAPEAAISILSNGSMLHKSSVKEALKRVDKNILKLDTGIESTFHTINQA
                     SGGLTLDKVINNLVAFDGKLIIQTLFVRGEYNGKVIDNTTDKEIEAWLKVLDKINPEY
                     IMIYPIERGTAAKDIEKIPEEELIAIAEKVEALGISTKVYF"
     gene            1415..2389
                     /locus_tag="QF480_02720"
     CDS             1415..2389
                     /locus_tag="QF480_02720"
                     /inference="COORDINATES: protein motif:HMM:NF012568.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HJN05507.1"
                     /translation="MTLLKDLKKPLSKEIKEFQKIFRKSVKSTVPLLDIIMRYILKTK
                     GKQIRPLIVFYSAALFNGINESTYRAATLIELLHTATLVHDDVVDDSDRRRGRFSINA
                     LWKNKIAVLVGDYLLSRGMLMALQAKEYSTLEIVSEAVKEMSEGELLQIEKARKLDID
                     EAIYFEVIRKKTASLLASCFAAGASSSTNNQEDIKKMWNIGESAGIAFQIKDDLLDFD
                     KSNVIGKPSGIDIKEKKMTLPLIYLLIHSPALKKRKIINIIKKHNSNSDKVNWVVNEI
                     ISVGGLKYATEKMIDYSTKALNLLHEYPESNNRLALEQIIEFTIDRKK"
     gene            complement(2392..3435)
                     /locus_tag="QF480_02725"
     CDS             complement(2392..3435)
                     /locus_tag="QF480_02725"
                     /inference="COORDINATES: protein motif:HMM:NF014567.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HJN05508.1"
                     /translation="MKINSPKNIALLNALVITIISGVAFLIITVSINQINAISIVIFL
                     AFIFVLSFVFINYSLNTFFSEKIKVIYKTIGRTGPNPDDMKKDKNKGDVLEIVNQVVL
                     RWSEEKKKEIDELKEMAAYRREFLGNISHEIKTPIFNIQGYVHTLLEGGLKDDSINTK
                     FLKKSVKSINRMIALVEDLEEISKLEVGDLKLKEENFNLHELIKEVVDFMEHKAAENK
                     TTIKISTALPKSTKVRADKERIRQVLINLIDNAIKYGKLENGRIRISFYNFQDNYLVE
                     VRDNGIGISEENIKRVFERFYRTEQSRARDKGGTGLGLAIVKHIIEAHRQTISVRSNL
                     GRGTTFSFTLKTA"
     gene            complement(3452..4138)
                     /locus_tag="QF480_02730"
     CDS             complement(3452..4138)
                     /locus_tag="QF480_02730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019245107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HJN05509.1"
                     /translation="MDNSKFSILLVDDEEDIVEFLSYNLKKEGYNVFTAKNGHKAIEK
                     AKKYKPTLILMDVMMPEMDGFTAVQEIRKIHELRDTIIVFLTARAEDYSQIKGFDAGG
                     DDYVTKPIKPKVLISRISALLRRYSSNELEVLEVLEVNNLKIDREKFVVIKNSEEIIL
                     PNKEFKMVFLLASAPDKVFSRDEIFKNVWGTEVIVGDRTIDVHIRKIREKIGLEYIRT
                     VKGVGYKFNR"
     gene            4292..6109
                     /gene="uvrC"
                     /locus_tag="QF480_02735"
     CDS             4292..6109
                     /gene="uvrC"
                     /locus_tag="QF480_02735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013612901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HJN05510.1"
                     /translation="MIKQKNNNRIERIIKTLPGKPGIYQYFDKDERILYVGKAKNIKK
                     RVGSYFTKSHQSGKVRVLVKKIVDIKFIVTETELDALLLENNLIKKYQPRYNIQLKDD
                     KTFPWLCLKNEPFPRLFPTRILVSDGSNYFGPYASVKMMRTILDIVKQLYQLRTCSLN
                     LSQSNIKKGKYKVCLEYHLDNCKAPCIGEQTEEDYNETIRQIKSIIKGNIGSVIVELT
                     QIMNTKADELEFEQAQVIKEKINILEKYKSKSTIVNPHINNVDVMSMVVGDSNSYFNY
                     LKVISGAIVQAHTIEVKRKLDETDAEVLTFALLDFRQRFESISKEIILPFLPEIEIPG
                     VKITIPQRGDKKHLLELSERNAKHTKIERQKQKDLIDPDRHKKRILAQIKKDLHMSDL
                     PVQIECFDNSNIQGDYPVAAMVQFLDGVPNKRAYRHFNIKTVEGANDYASMEEVIKRR
                     YSRLISENKRLPQLIIVDGGKGQLSSAVKALKSIDIYGKITIIGIAKRLEEIYFPNDS
                     IPLYLDKTSETLKVIQRLRDEAHRFGITHHRKRRESGTIKSILTTIDGIGFSTAQKLL
                     WKFKSVKKVKKAEKEDLALAIGQSKAQVVFNYFHPELKD"
     gene            complement(6355..7092)
                     /gene="lptB"
                     /locus_tag="QF480_02740"
     CDS             complement(6355..7092)
                     /gene="lptB"
                     /locus_tag="QF480_02740"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018338507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HJN05511.1"
                     /translation="MKLWTEELVKKYKQRTVVNHVSMEVNRGEIVGLLGPNGAGKTTC
                     FYMIVGLIKPFSGKVFLDETEITNEPMYKRAKRGIGYLAQEASVFRHLSVEDNLKAVM
                     EFTDLTKEQQAEKLELLLDEFGLQGIRKSKGIQLSGGERRRTEIARALAVNPNFILLD
                     EPFAGVDPIAVEDIQTIVSQLKKKNIGILITDHNVHETLTIVDRAYLLFEGSILKSGS
                     AEDLANDEHVRKVYLGKNFALRKKEFS"
     gene            complement(7094..8059)
                     /locus_tag="QF480_02745"
     CDS             complement(7094..8059)
                     /locus_tag="QF480_02745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018338505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HJN05512.1"
                     /translation="MDINDKIRNTAISVIYDEYIAVKKLSNSIDDDFIQAVRLIYESN
                     GRVIVTGIGKGAIIAQKIVATFNSTGTPSIFLHAADAIHGDLGIVTKEDIVIIVSKSG
                     ETPEIKVLIPLIKARKNKIIALVGNKKSFLANQADYILDATVEKEACPNNLAPTTSTT
                     AQLVMGDALAISLLELKDFSAADFAKFHPGGSLGKRMFMRVIDLASNNEVPVVDADEP
                     IPKVIIEISSKRLGATAVLEKGKLIGVVTDGDLRRMIEKHNNFNKLVARDVMTNNPLT
                     IDQEELVVNALSLMRENNITQLPVTDNGNYIGVIHLHDILKEGIF"
BASE COUNT         2742 a         1408 c         1248 g         2703 t
ORIGIN      
        1 accagctaat gcaaatagtt tctcattttt aaagaaaatc ctgaatggag ttttgttttc
       61 atcttttctc cattcataaa atccgttagc tggtataaga catcgccgtt ttttgaatgc
      121 atttttaaac gacggtttgc tgctgatagt ttccgatcgg gtattaatat tccgatatcc
      181 taattttgga tctttagccc agaacggaat tagtccccag cgaaaatagc taaggctatg
      241 gggttgatca ttcgtaatta ctggaagttt ttgagatggt gcacaattgt agtttggttt
      301 atagagttca tcaaacactt ctacattaaa acgttcagag atttgtttcc cctttaccga
      361 taattgaaat cttccgcaca tggagtttag attataaatt atatgttatt agttatatgt
      421 tattagttaa ttctactggt ttaagtttct ggctaaacat tatctttttg attaaggaat
      481 aaacacaatt cattttgaca aagtttgaaa aattttatct aaaagtacac ctttgtacta
      541 attcccaaag cttctacttt ttcagcaata gctatcaact cttcttcagg aattttttca
      601 atgtcttttg cagcagttcc tctttcgata ggataaatca ttatatattc aggatttatt
      661 ttatccaaaa cttttaacca ggcttctatc tctttatctg tagtattgtc aataaccttc
      721 ccattatatt cacctcttac aaatagagtt tgaattatta gttttccatc aaacgcgacc
      781 aggttattaa taactttatc taaagttaaa cctcctgatg cctgattaat agtatgaaat
      841 gtactttcga ttccagtatc tagcttcagg atgtttttat ctactctttt aagagcttct
      901 tttacagaag atttatggag catacttcca ttcgacaaaa tactaatggc tgcctcaggt
      961 gcataacgat tacgtacttc gatggtatcg ttaattattt ctgcaaaatc aggatggata
     1021 gtaggttctc cattaccagc aaaagttatt gaatcaggtt cgttaactgt accttgtaat
     1081 tcttttagtt tattctccaa ttgtgcttta aaattttcac gctttggtag aactatttta
     1141 actcctttgc ttaaatcagt ccatccacat tcacaataca cacaattaaa attgcaaaac
     1201 ttattgttga caggtaataa gtttatacca agagaaacac ctaaccttct gctatataca
     1261 ggtccaaaaa taaggttgtc aaataaaaat cctgccatga ttactgtttg tgcaaaaata
     1321 gatttaaatt tgatttctat tattgatgtg atatcttaat aatatgttaa acttgaatac
     1381 ttcttaatat tttaagtcga aaattatagc ccttatgaca ttattaaaag acttaaaaaa
     1441 gccactttcc aaagaaatta aggaatttca gaagattttt cgcaaatcag taaaatcaac
     1501 agtcccactt ctggatatta taatgaggta cattctcaaa acaaagggta aacaaattag
     1561 accattaatt gttttttata gtgctgcttt attcaacgga attaatgaat caacttatcg
     1621 agcggccacg ctaattgagt tattacatac tgcaacactt gtacatgacg atgttgttga
     1681 tgattcagat agacgaagag ggaggttctc aataaatgcg ctttggaaga ataaaatagc
     1741 agtcctggtt ggtgattatt tattatcacg tggaatgtta atggcattac aagcaaagga
     1801 atatagcacg ttggaaattg tttcggaagc tgtgaaagaa atgagtgaag gagaactatt
     1861 acaaatcgaa aaagcaagaa agttagatat tgatgaagcg atttattttg aggtaatacg
     1921 aaaaaaaact gcctcacttt tggcatcatg ctttgctgct ggtgcctcat cctcaactaa
     1981 caatcaagaa gacattaaaa aaatgtggaa tatcggtgaa tctgctggta tagcttttca
     2041 aattaaagat gacttacttg attttgataa aagtaatgtc ataggaaaac caagtggcat
     2101 tgatattaaa gagaaaaaga tgactcttcc attaatttat ttacttattc attcacctgc
     2161 attaaaaaag aggaaaataa tcaatattat taaaaagcac aattcaaata gtgataaggt
     2221 aaattgggta gtaaatgaaa ttataagcgt gggtggatta aaatatgcca ctgagaaaat
     2281 gatagattat agtaccaaag ctttaaatct tctacatgaa tatcccgaga gcaataatag
     2341 gcttgcccta gaacaaatta ttgaatttac tattgatcga aaaaaataac tttaggctgt
     2401 tttcagtgta aacgaaaaag tggttcctct accaagatta ctcctaacgc tgattgtttg
     2461 acggtgagct tcaataatat gcttgacaat tgctaggccc agtccggttc ctcctttatc
     2521 acgcgcacgg ctttgctcag ttcgataaaa ccgttcaaaa acccttttga tattctcttc
     2581 cgaaattcct attccattat ctctgacttc tacaaggtag ttatcttgaa aattataaaa
     2641 agaaattctg atccgaccat tttcgagttt gccatatttt atggcgttat cgattaaatt
     2701 aatcaatact tgacgaattc tttctttatc ggctctaacc tttgtgctct ttggtaaagc
     2761 agtacttatc tttattgttg tcttattttc tgcggctttg tgctccatga aatctaccac
     2821 ttctttaatt agttcatgga ggttaaagtt ttcttctttt agtttaaggt caccaacctc
     2881 taatttactt atctcttcaa gatcttcaac aagggcaatc atacgattaa tactctttac
     2941 cgatttcttt aaaaactttg tatttatcga atcatctttc agtccaccct caagcaaagt
     3001 atgtacataa ccctgaatat taaagatagg tgttttaatt tcgtgcgata tattacctaa
     3061 aaactctctt cggtaagcag ccatctcttt caactcgtca atttctttct ttttttcttc
     3121 actccaccta agaactacct gattaacaat ttcaagaaca tcccctttat tcttatcttt
     3181 cttcatatca tcaggattgg gtccagtacg accaatggtt ttataaatta cttttatttt
     3241 ttcgctaaaa aatgtgttta aactataatt aataaagaca aaggatagta caaaaataaa
     3301 cgctaaaaaa atcactattg aaattgcatt tatttggtta atagagacag taataattaa
     3361 aaaagcaaca ccagaaataa tagtaattac taaagcattt aatagggcga tattttttgg
     3421 tgaattaatt ttcaagtgcg aaatcctttt attatctatt aaatttatac cctacacctt
     3481 ttacggttcg gatgtattct aacccgatct tttctcggat ttttctaata tgaacatcaa
     3541 ttgtgcggtc accaacaatt acctcggttc cccaaacgtt tttaaatatt tcatctctag
     3601 agaaaacctt atcaggagct gatgcgagta aaaagaccat tttaaattcc ttgttaggaa
     3661 gtattatttc ttcactattt tttataacta caaatttttc acgatcaatt ttcaggttat
     3721 taacttcgag tacctccaaa acttcaagct catttgatga ataacgtcgg agtagtgcag
     3781 atatcctact gattaatact ttaggcttaa taggctttgt aacataatca tcaccaccag
     3841 catcaaatcc tttgatttgt gaataatctt cagctcttgc agttaaaaaa acaataatcg
     3901 tatctcttaa ttcatgaatt tttctgattt cctgtactgc cgtaaagcca tccatttctg
     3961 gcatcattac atccattaat ataagtgtag gtttgtactt ttttgctttt tcaatagcct
     4021 tatgaccatt tttggcagta aacacattgt aaccttcttt tttaagatta tagcttaaaa
     4081 actcaactat gtcttcctca tcatcaacta acaagatgct gaatttacta ttatccataa
     4141 cagtattcaa aaaatttaac gatgcaattt accacaataa aatctaggaa atacaccaca
     4201 atattaattt taagttaata tttaagattc cttttatcac atatatgcat attaatttgt
     4261 ctttactaaa tttgcaggca aagtttgttt cttgataaaa caaaaaaata ataatcgtat
     4321 tgaaagaata ataaaaaccc ttccgggtaa accgggaatt tatcaatatt tcgacaaaga
     4381 tgaacgcata ctttatgtag gaaaagccaa aaacataaag aaaagagttg gaagttattt
     4441 tacaaaatca caccaatcag gtaaagtaag agtacttgta aaaaaaatag ttgatataaa
     4501 atttattgtt acagaaaccg agttagacgc actcctcctt gaaaacaatc ttataaagaa
     4561 atatcaacca cgatacaata ttcagctaaa agatgataaa acatttccat ggctttgttt
     4621 aaaaaatgaa ccattcccac gactttttcc aaccagaata ttagtaagtg atgggtcaaa
     4681 ttactttggc ccttatgcat cagtaaaaat gatgcgtact atacttgata ttgttaagca
     4741 actttatcaa cttcgaacat gctcattaaa tctatcccaa tcaaacataa aaaaaggaaa
     4801 atacaaagtt tgtcttgaat atcaccttga taattgcaaa gcaccttgca taggtgaaca
     4861 aactgaagag gattacaatg aaactatcag gcaaataaaa tcaataataa aaggcaatat
     4921 tggttcggtt atagttgaat taactcaaat aatgaatacc aaggctgatg aacttgagtt
     4981 tgaacaggca caggttataa aagagaaaat caatattctt gaaaaatata aaagcaaatc
     5041 gaccattgtt aatcctcata taaataacgt tgatgttatg tcgatggtag ttggtgacag
     5101 caattcatac ttcaattatt tgaaagtaat tagtggtgct atagttcagg cgcacacaat
     5161 tgaggtaaag cggaagctcg atgaaacaga tgctgaggta cttacatttg ctttgctaga
     5221 ttttcgacaa cgatttgaaa gtatatcgaa agagatcata ttaccctttt tacccgaaat
     5281 agaaattccg ggagtgaaaa tcaccattcc tcagcgtggt gacaaaaaac acttattgga
     5341 attaagcgaa agaaatgcaa agcatacaaa gatagagcgg caaaaacaga aagacctcat
     5401 tgatcccgac aggcacaaaa aacgaatttt agcacaaata aaaaaggatc tgcatatgag
     5461 tgatttgcct gttcaaatag aatgtttcga taattcaaat attcagggag attatcccgt
     5521 agcagcaatg gtccagtttt tagatggagt tccaaataaa agagcttatc gtcatttcaa
     5581 tatcaaaact gttgagggag ccaatgatta tgcttcaatg gaagaagtta taaaaagaag
     5641 atatagcagg ctgatttctg aaaacaaaag gttacctcaa ttaattatag tagatggagg
     5701 caaggggcag ttaagttcag ctgtgaaagc cctaaaatcg attgacatct acggaaaaat
     5761 tactataata gggattgcaa aaagactgga agaaatttat tttcctaatg attcaatacc
     5821 tctttactta gataaaactt cagaaacctt aaaggtaatc caacgactga gggacgaggc
     5881 tcatcgtttt ggtataactc atcatagaaa aaggcgagaa tctggtacaa ttaaatctat
     5941 acttacaaca attgatggaa ttggtttttc aactgcacaa aaattactat ggaaattcaa
     6001 gtctgttaaa aaggtaaaaa aagctgaaaa agaagatctt gcattagcaa ttggtcaatc
     6061 aaaagcacaa gtggtattca attattttca tccagaactc aaggattaat ggtaattcat
     6121 aaaaaacgaa aagccctgtc cgggcgaaca gggtcttttc acatattaac ctaaaaaccc
     6181 tcatgtttga gggataaccc aaaaaattaa cctgctaaag ttaatagttc tatgaagaac
     6241 caatgcaaat ataatacaaa ttatatagat aggttctaaa ttaggaaatt tttttgttaa
     6301 aaaatgaaat tattttgtaa aacgctgtta ataaatatta tgcaaatgca ataattaact
     6361 gaattctttt ttcctgaggg caaaattttt ccctagataa acttttctta catgttcatc
     6421 attagctagg tcttcggctg aaccagattt tagtatcgat ccttcaaaca gtaaataagc
     6481 cctgtcaact attgtaagtg tttcatgaac attgtgatca gtaattaata tgccaatatt
     6541 tttcttttta agttgcgaaa cgatagtttg tatatcctca acagcgatag gatcaacacc
     6601 agcgaatggt tcgtcaagta atataaaatt aggattaacg gcaagagctc ttgctatttc
     6661 tgttctacgc ctttcgcctc ccgacaattg aattccctta cttttacgaa taccctgtaa
     6721 tccaaattca tcaagaagca gttcgagttt ttccgcttgt tgctccttag taagatcagt
     6781 aaattccatt acagctttaa ggttatcttc tacactcagg tgtctaaaaa cagatgcttc
     6841 ctgagcaaga tatcctatcc ctcgcttagc ccgtttgtac ataggctcgt tagtaatttc
     6901 agtttcatca agaaatacct ttcccgaaaa aggtttgatc aagcctacga tcatataaaa
     6961 gcaagtagtc tttccagctc catttgggcc taataatcca acaatctcac ctctgtttac
     7021 ttccattgac acatggttaa caacagtgcg ctgtttgtat tttttaacaa gttcttcggt
     7081 ccaaagtttc atattaaaaa attccttcct ttagtatatc atgcaaatga attacaccta
     7141 tataattgcc attatcagtt actggaagtt gagtaatatt attctccctc attaaagaaa
     7201 gagcattcac tactaattct tcttgatcaa ttgtaagtgg attattggtc attacatccc
     7261 gggcaactag tttgttgaaa ttattatgct tttcaatcat tcgtcttaaa tcaccatctg
     7321 ttactacacc tataagtttt cctttctcca gtacggcagt agccccaagc cgttttgaag
     7381 atatttcaat gataactttt gggataggtt catcggcgtc tacaactgga acttcattat
     7441 ttgaagcaag gtcaattact ctcataaaca ttcgttttcc tagcgaccct ccgggatgaa
     7501 acttggcaaa atcagcagct gaaaagtcct tgagttcaag caaacttatt gcgagagcat
     7561 cgcccattac aagttgtgca gtggtactgg tggtaggagc aagattattc ggacatgctt
     7621 ctttttcaac tgttgcatcc agtatgtaat cagcctgatt ggctagaaac gattttttat
     7681 taccgactaa ggcaataatc ttatttttac gagccttgat taaaggtatt agtactttaa
     7741 tttctggtgt ttcgccactt tttgagacaa taattactat atcttctttt gtaacaatcc
     7801 ccaaatcacc atgaatagca tcagcagcat gcaaaaagat tgatggtgta cctgtagaat
     7861 taaaagtagc tacgatcttt tgagcaataa ttgcaccttt cccaattccg gttacaatta
     7921 cccttccatt cgattcatag ataagtctta cagcttgaat gaaatcatca tcaattgagt
     7981 tcgataattt tttaacagct atatattcat cataaatgac cgaaattgca gtatttctta
     8041 ttttatcgtt tatatccaat tatttatttg ttaaaacttg taaacaaaaa aattattatt
     8101 a
//
LOCUS       DASCQP010000163         4007 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000652347, whole genome shotgun sequence.
ACCESSION   DASCQP010000163 DASCQP010000000
VERSION     DASCQP010000163.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4007)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4007)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4007
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000652347"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..451)
                     /locus_tag="QF480_02750"
     CDS             complement(<1..451)
                     /locus_tag="QF480_02750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJN05513.1"
                     /translation="MEHIRKALNEYAAARWGILILVGFILSVNYYFYDAFSTLKDLMS
                     KEFGFTNVQYGLFVAFYSIPNTFLLMAVIGGVILDKIGIRRTGFIFVFFMALGAFITA
                     YGGSQIYSEGGFGYNFMQSFLPSYSPELKMMLIGRFFYGLGAETSIVV"
     gene            613..1122
                     /locus_tag="QF480_02755"
     CDS             613..1122
                     /locus_tag="QF480_02755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05514.1"
                     /translation="MAYYLKILQVLLLSTVKYFYTPFYAHMIGLDIWGTGIAMIVGGV
                     IGFIIYYHISKIVIISTRHIKPVASVVLPLRIRNKYRSYRHRRRLHRKNKKKFTWRNR
                     MLVKLGKNYGMYTIIVFTPILISLILGAFLLRRYYDDRREAVPLMIVSIILEGSILIA
                     GYWYIMGDL"
     gene            complement(1303..>4007)
                     /locus_tag="QF480_02760"
     CDS             complement(1303..>4007)
                     /locus_tag="QF480_02760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05515.1"
                     /translation="ESWEKVLFISENTGVANLSFEAGNPDVIYAGAEQRRRRQFSKIG
                     GGPESAFYKSTDAGITWKKLEKGIPKVDKGGMEIVASPIDPNIVYAMFEASNGKGGFF
                     RSTNRGASFSKQNKYSSSGQYYSELVCDPINKDKLYSLDTRTKVSVDGGKTWKSVGLR
                     KRHVDDHAMWIDSDNTNHFFIGGDGGIYESWDAGNSYIHKTTLPVTQFYRVNVDNTEP
                     FYWVYGGTQDNASMGGPSQNTKNGGVASDEWVVTLGGDGFWQAIDPDNPDIVYSAYQY
                     GNIYRYDKKSGEKIKIKPVPQKGELTYRWNWDTPFFLSPHSGTRLYIAANKVFRSDDR
                     GNTWEVISDDITRNEDRNQFKVMGKFWPADAVAKDVSTSQWGTTVAFAESPVKEGLLY
                     LGTDDGLIQVSEDGGSNWTKISTFPDVPEYTYVSDILPSSFNENVVFASFNNIKSDDF
                     KPYLLQSNDKGQTWESIVSDLPEDQSIHTISQDPVKEDLLFTGTEFGIYFTVDGGSHW
                     VKLGSGLPDIAVRDIAIQERENDLVIATFGRGFYIIDDYSPLRQVTEETIKNEEAIIF
                     PVKDALMYIKTGSGRYGTGAGYYQAENPEFGAVFTYYLKDVPKSLKSKRLKKEKVLFK
                     EGNPIPQPDKATLDAEKNETKPYLVFSIKDEDGNLIRNIYKKPSTGINRINWDMRYKS
                     SRPIRLSNDKFDPLKSGGTSLRALPGKYTVTMSMFYNGEQKELAGPVEFNTVVLNNRT
                     LPAPSDKDALTFYKKVTELYRVMSGTMRYRDELAEKTSYIQQALQSVDNASVSLKNEM
                     HQIKQELDNIEFKFDGTAAKASSEEVPPESVPLSDRLNAIVWSAWQSTSAPTSTQKNN
                     YNILMEEFPPVLIELNNINKKLVEMEQELDKLKAPHTPGRVPGF"
BASE COUNT         1249 a          795 c          648 g         1315 t
ORIGIN      
        1 ccacaacaat acttgtttcg gcaccaagcc cgtaaaagaa tctgccaatt agcatcatct
       61 tcagctcagg tgaataactt ggtaaaaatg actgcataaa attataacca aaaccgcctt
      121 cagaataaat ttgcgaaccg ccatatgctg taataaaagc accaagagcc atgaaaaaca
      181 caaaaataaa acctgttcga cgtatgccaa tcttatccag aattacaccc ccgattactg
      241 ccatcagtaa aaaagtattt ggaattgaat aaaacgcaac aaataatcca tattgaacat
      301 ttgtaaagcc aaattccttg gacattaaat ccttaagagt tgagaacgca tcataaaaat
      361 agtagttcac tgaaagaata aatccaacta atattaatat gccccatcga gcagcagcat
      421 actcatttaa agcttttctt atatgttcca ttttgaatta ttcataaatc gcgtaaaagt
      481 acgatataaa acatatcaca atactgctta agattgttaa gaaaaccaga aaagaaaagt
      541 ttaataaagc cccgaagctt taagttatct aataaataat aatgtactat ttttgttatc
      601 atataatcta acatggccta ttacttaaag atacttcaag tactgttact atctactgta
      661 aaatactttt acacaccctt ttatgcccac atgataggct tggatatttg gggaacagga
      721 attgcaatga ttgttggtgg tgttataggt tttataattt attatcatat tagtaaaatt
      781 gtcattatct ctacaaggca tataaagcct gtagcaagcg tcgttttacc tttacgtata
      841 cgaaataaat ataggagtta cagacacagg cgaaggcttc atcgtaaaaa caaaaaaaag
      901 tttacttgga gaaaccgaat gcttgtaaag cttggaaaaa actatggaat gtataccata
      961 attgttttta cacctattct gatatctcta atactaggtg cttttcttct acgtagatat
     1021 tatgatgata ggcgtgaggc tgttccactt atgatagttt ccataattct tgaaggttca
     1081 attcttattg ctggttattg gtatataatg ggagatcttt aattacttag agagcataag
     1141 attggagatc tacatatatt ggattaaaga tatgtgaaaa ttgtaattat ggtccaccag
     1201 aggcgagaag aatctcacaa tgattagaat aagtcaatta tgagatcctt cattatgaaa
     1261 gctacgtcag gatgacaaaa agagttttac acgggtttaa gtttaaaatc caggaaccct
     1321 gccaggtgta tgaggtgctt tcagcttatc gagctcttgc tccatttcaa caagcttttt
     1381 gttgatatta tttagttcta tcaatacagg aggaaactct tccattaaaa tattgtaatt
     1441 attcttttga gtacttgtag gggctgaagt tgactgccag gcggaccaaa caatagcatt
     1501 taatctatcg cttaatggaa cactttctgg aggcacttct tctgaactgg cctttgctgc
     1561 tgtgccgtca aacttaaact caatattatc gagttcttgc tttatttgat gcatttcatt
     1621 tttcaggcta acacttgcat tgtcaactga ttgtaatgcc tgttggatat aggaagtttt
     1681 ttctgcaagt tcatcacgat atctcatagt accagacatt acacggtata gttcggtaac
     1741 ttttttgtaa aaagtaagag catctttatc agaaggagcg ggtaatgttc tgttattcaa
     1801 cacaaccgta ttaaattcaa caggcccagc caattctttt tgttcaccat tgtaaaacat
     1861 cgacattgta accgtatatt ttccgggtaa cgcacgaaga ctggttcctc cacttttaag
     1921 aggatcgaat ttatcgttgc ttaatcttat cggccttgaa ctcttgtatc tcatatccca
     1981 gttaatccga ttaattccgg ttgatggctt cttataaata tttcttataa gattcccatc
     2041 ttcatccttt attgaaaaaa ccaaatacgg ttttgtttca tttttttcgg cgtcaagagt
     2101 tgctttatct ggttgaggaa ttggatttcc ttctttaaat aatacttttt cctttttaag
     2161 ccgttttgat ttaagtgatt ttggaacatc ctttagatag taagtgaaaa cggcaccaaa
     2221 ttcaggattt tctgcttgat aataaccagc accagttcca taacgcccac ttcctgtttt
     2281 aatatacatt agggcatcct taacagggaa tatgattgcc tcttcatttt taattgtttc
     2341 ttctgttacc tgacgtaaag gtgagtaatc gtcaattata taaaaacctc gaccaaaagt
     2401 agctataaca aggtcgtttt ccctttcctg tatagcaata tcacgaacag ctatatctgg
     2461 taatccagac ccaagtttta cccaatgact tccaccatct acagtaaaat aaattccaaa
     2521 ttctgttccg gtaaacaata aatcttcttt aactggatct tgactaattg tatgtattga
     2581 ttggtcttct ggaagatcag aaactattga ttcccatgtt tggcctttgt cgttactttg
     2641 taataaatat ggtttgaaat cgtcactttt aatattgtta aatgaggcaa aaacaacgtt
     2701 ctcattaaaa cttgacggta aaatatcact aacatatgta tattcaggga catcaggaaa
     2761 agtggaaatt ttcgtccagt tactaccccc gtcttcactt acctgaatta aaccatcatc
     2821 agtgccaaga tataagagtc cctcttttac aggtgattct gcaaaagcaa cagtagttcc
     2881 ccattgtgat gtagacacgt ccttcgcaac agcatcggct ggccaaaatt tacccatgac
     2941 tttaaattga ttccggtctt cattacgagt tatatcatcg ctgataactt cccatgtgtt
     3001 acccctgtcg tcacttctaa acactttgtt tgctgcaata tacaaccttg ttcctgagtg
     3061 tggactaaga aagaaaggag tatcccagtt ccatctatat gtaagctctc ctttttgagg
     3121 tacaggttta atctttatct tttcaccaga ttttttatca tatctataaa tatttccata
     3181 ctgatatgcg gaataaacga tatcaggatt atcaggatca attgcttgcc aaaaaccatc
     3241 gccaccaagt gttacaaccc attcatcact tgcaacaccc ccgtttttag tattttgaga
     3301 aggaccaccc atacttgcat tatcctgggt gcctccataa acccaataaa aaggctcagt
     3361 attatcaaca ttaactctgt aaaattgggt taccggtagg gttgttttgt gaatatatga
     3421 atttccggca tcccagcttt cgtagatacc cccgtcgcca ccaatgaaaa aatggtttgt
     3481 attgtcagag tcaatccaca ttgcatgatc atcaacatga cgctttctga ggccaacact
     3541 tttccaggtc tttccaccat caacagaaac cttagttctc gtatctaacg aataaagttt
     3601 atctttgtta atagggtcac atactaattc actatagtat tgcccgctgc tggaatattt
     3661 gttttgtttg ctaaaagatg ctcctctatt agtagaccta aaaaatcctc ccttaccgtt
     3721 tgaagcttca aacatggcat aaacgatgtt tggatcaata ggtgaagcta ctatttccat
     3781 accaccttta tccactttcg gaataccttt ttcaagcttt ttccaagtaa tacctgcatc
     3841 tgttgattta tagaatgcag attcaggccc accaccaatt ttactaaact gacgacgtct
     3901 acgctgttcg gctcctgcat agattacatc aggattacct gcttcgaaac tcaagtttgc
     3961 aactccggta ttttcactaa tgaaaagaac cttctcccat gattcac
//
LOCUS       DASCQP010000164         2197 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000656340, whole genome shotgun sequence.
ACCESSION   DASCQP010000164 DASCQP010000000
VERSION     DASCQP010000164.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2197)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2197)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2197
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000656340"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1463
                     /locus_tag="QF480_02765"
     CDS             <1..1463
                     /locus_tag="QF480_02765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017141367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HJN05516.1"
                     /translation="YRMNIIEGVAEESDELLEKFMDDPHSITEDEMINVIRTSTLNMS
                     ITPVMCGSAFKNKGVQMLLNAIIEFLPSPLDVDAVVGINPKTEKEEIRKANPNDNFSA
                     LAFKIATDPFVGRICFFRVYSGKLKAGSYVYNVSTGKKERISRIMQMHANKQEPLDVI
                     EAGDIGAGVGFKTIHTGDTLTDEKHPIILEAMTFPDPVISIAIEPKTQKDIDKMSLAL
                     AKLAEEDPTFKVTIDVDSGQTIISGMGELHLDILVDRLKREFGIDCTIGLPQVNYKEA
                     ITGTIHHKEVYKKQTGGRGKFANIEFELGPVDEGEEGLQFIDEVKGGNIPREFIPSVK
                     KGFKTAMQNGVLAGFAVDNMKVRLIDGSYHPVDSDQLAFEMAAKIGFKVAAKMAKSVL
                     LEPVMKVEVVTPEEYLGDVTGDLNKRRAILEDVTAKIGYQIVKVKVPLSEMFGYVTTL
                     RSLTSGRATSSMEFNSFRKAPDFVSEEVIKKIKGIF"
     gene            1480..1785
                     /gene="rpsJ"
                     /locus_tag="QF480_02770"
     CDS             1480..1785
                     /gene="rpsJ"
                     /locus_tag="QF480_02770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005782187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HJN05517.1"
                     /translation="MSQKIRIKLKSYDHNLVDKSAEKIAKAVKSTGAVISGPIPLPTH
                     KKVFTVNRSTFVNKKAREQFELSTYKRLMDVFNSTSKTIDSLMKLELPSGVEVEIKV"
     gene            1813..>2197
                     /gene="rplC"
                     /locus_tag="QF480_02775"
     CDS             1813..>2197
                     /gene="rplC"
                     /locus_tag="QF480_02775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016275270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HJN05518.1"
                     /translation="MSGLLGKKIGMTSIYDENGKNIPCTIIKAGPCVVSQVRTKEVDG
                     YEAIQLAFEDKKEKHTTRAMKGHFDKAKTSPKRHLAEFSRFEEKKKFGDILTVDVFRE
                     GEFIDVVGTSKGKGFQGVVKRYNFKG"
BASE COUNT          784 a          302 c          466 g          645 t
ORIGIN      
        1 attatcgcat gaatattatt gaaggtgttg ctgaggagag cgatgagcta cttgaaaagt
       61 tcatggatga tcctcattca attactgaag atgaaatgat caatgtcata cgtacatcaa
      121 cattaaatat gtcgattaca ccagtaatgt gtggctccgc ttttaagaat aaaggagttc
      181 agatgctgtt aaatgctata attgaatttc tacctagtcc acttgatgta gatgccgttg
      241 ttggtattaa tcctaaaact gaaaaagagg aaattcgtaa agctaatcct aatgataatt
      301 ttagtgcttt agcttttaaa attgctactg atccatttgt tggtagaata tgcttcttca
      361 gagtttattc tggaaagtta aaggctggct catatgtata taatgtatcc actggaaaaa
      421 aagagagaat tagtcgtata atgcaaatgc atgcaaacaa gcaggaacca ttagatgtaa
      481 ttgaagccgg agatatagga gcaggtgttg gatttaaaac tatacatact ggtgatacat
      541 tgacggatga aaagcatcct atcattcttg aagcaatgac attccctgat cctgttatta
      601 gcattgctat tgagccaaaa acacaaaaag atattgataa aatgtcactg gcattggcga
      661 aacttgctga agaggatcca acttttaaag taacaataga tgttgattca ggtcaaacca
      721 ttatttcagg aatgggtgaa ttacaccttg acattctagt tgacagatta aagagagaat
      781 ttggaattga ttgtaccatt ggacttccac aagtgaatta caaggaagcg atcacaggta
      841 caatacatca taaagaggtt tacaagaagc aaacaggcgg taggggtaaa tttgcaaata
      901 ttgagtttga attgggtcca gttgatgagg gcgaggaagg attgcaattt atagatgaag
      961 ttaaaggagg taatattcca cgtgaattta ttccttcagt aaagaaaggt ttcaaaacag
     1021 caatgcaaaa tggtgttctg gcaggtttcg ctgttgataa tatgaaggta aggctcattg
     1081 atggctctta ccatcctgtt gattctgatc agcttgcgtt tgaaatggct gcaaaaattg
     1141 gatttaaggt ggcagctaaa atggcaaaat ctgttctact tgaaccagtc atgaaagtgg
     1201 aggttgttac tcctgaagaa tatcttggag atgtaacagg cgaccttaat aaaagaaggg
     1261 caattttaga ggatgttact gcaaaaatcg gatatcagat tgtaaaagtt aaagtaccat
     1321 tatcagaaat gtttggatat gtaactacat tacgatcatt aacttcaggt agagctacat
     1381 caagcatgga gtttaactct tttagaaagg cacctgattt tgtatcagaa gaagtaataa
     1441 agaaaataaa aggaattttt tagataaaaa tatactagcg tgagtcagaa aattagaatt
     1501 aagcttaaat cgtacgatca taatctggtt gataaatcag ccgagaagat tgcaaaggcg
     1561 gtaaaatcta caggagcagt tattagtggt ccaataccct tgccaactca taaaaaagta
     1621 tttactgtta atcgttcaac ttttgttaat aaaaaggcgc gcgaacagtt tgagttaagc
     1681 acttataaaa gattaatgga tgtatttaac tctacttcaa aaaccattga ctcattgatg
     1741 aaacttgagc ttcctagtgg tgttgaagtt gagattaaag tataacaata aacgatttaa
     1801 aaattaataa caatgtcagg attattaggt aagaaaatcg gcatgacctc aatatatgat
     1861 gagaatggaa aaaatattcc atgtactatt ataaaagcag gcccatgtgt tgtaagccag
     1921 gtacgtacaa aggaagttga tggctatgaa gctattcaac tagcttttga ggataagaag
     1981 gaaaagcata caaccagggc aatgaaaggt cattttgata aggcaaaaac ttcaccaaaa
     2041 agacacttag ctgaatttag ccgatttgaa gaaaagaaaa aatttggtga tattctaaca
     2101 gttgatgttt ttagagaagg tgaatttatt gatgttgttg gaacatccaa aggaaaggga
     2161 tttcagggtg ttgttaagcg gtataacttt aaaggtg
//
LOCUS       DASCQP010000165         2003 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000659695, whole genome shotgun sequence.
ACCESSION   DASCQP010000165 DASCQP010000000
VERSION     DASCQP010000165.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2003)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2003)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2003
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000659695"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2003)
                     /locus_tag="QF480_02780"
     CDS             complement(<1..>2003)
                     /locus_tag="QF480_02780"
                     /inference="COORDINATES: protein motif:HMM:NF012869.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /protein_id="HJN05519.1"
                     /translation="LTKKNIAEQTGSFPPIDTKGGYWLVTKPTKLKVFNRIETDDFKV
                     FPATSKLWYQIEKGTEFYVSNTLNVLRTSPSFLSDYLDFYSVIFDIDTMLLDLVKQER
                     VINVNRSIKNNNEQRETSYESLMRIANPKAKEVISNDDDDYLLACLKLIGKFEKINFK
                     RVFVENPRYSNFENILRGSHVRSKQVKLTKDWFKTRSSAYLSYLDDNTPIALIPKGQY
                     GYVAVNVKTQTKEAVTKQNAHKFENDVISFFTPFPDGALTAKTLIKFGFQFAKKDLYF
                     FLFIGILSALLGLFVPISMGFIFDNVIPNGSVSQLGQIFILLVALAISMGIMNFAKSV
                     CILRMEGILSYKIMSATWDRILTLKVKFFEKYASGDLATRSMGIDTIRDMLSGTIMSI
                     FMSLIFSIFYLGLLFFYNFKFALLGLVLSFIISVFSVIISFAIYKHLKIMRVLDVKIA
                     GILFQLINGVNKIRITNSGERAFNQWAKQYSIKQMHNLSIKKIGVISSVFNSSFPILA
                     TILLLYVAYKLLLAVESGFTVGSFIASHMAYLHFQSAILQASMSLLPILAIKPIFNLF
                     KPILEADMENTGAEANPGTITGAISVCNASFRYNKDQPWIINNVNFNILPGEFIAIVG
                     DSGAGKSTILRLLLGFEDLNSGQIHYDSNDINTTAVRLLRAQIG"
BASE COUNT          695 a          355 c          282 g          671 t
ORIGIN      
        1 cctatttgag cacgcaataa cctaacagct gtagtattaa tatcattact gtcataatgt
       61 atctgaccac tgttgagatc ctcaaatcca agcaacagcc taagtattgt tgatttaccg
      121 gcaccggaat caccaactat tgcaataaat tcacctggca atatgttaaa gttaacatta
      181 ttaattatcc atggttgatc cttgttatac ctaaagctgg cattacacac agaaatagcc
      241 cctgtaatag tgccagggtt ggcctctgct cctgtatttt ccatatcagc ttcaagtatt
      301 ggtttaaata gattaaaaat tggttttatt gctaaaattg gaagcaatga catacttgct
      361 tgcaatattg cactttgaaa atgcaaatat gccatatgag aagctatgaa actacctaca
      421 gtaaaacctg actcaacagc aagcaatagt ttatacgcta cataaagcag caaaatagtt
      481 gctaaaatag ggaatgaaga attaaacaca ctacttataa cacctatttt ctttattgaa
      541 agattatgca tttgtttaat tgagtattgc ttagcccact gattaaatgc tctttcgccg
      601 ctattagtaa tccgtatctt atttacacca ttaattaact ggaataatat gccagctatt
      661 ttaacatcaa gaactctcat tattttaaga tgtttataaa ttgcaaaact tattattaca
      721 gagaaaacag aaataataaa gctaagtaca agacccagaa gtgcaaattt gaaattatag
      781 aagaacagta acccaagata aaaaattgaa aatattaatg acataaatat cgacataatt
      841 gtacccgaaa gcatatccct tatagtatca atccccatac tacgtgtagc taagtcacct
      901 gaagcatatt tttcaaaaaa ttttactttt aacgttaata ttctatccca tgttgctgac
      961 attattttat agctaagtat accctccatt cgtaatatac acaccgattt tgcaaaattc
     1021 attattccca ttgatattgc aagtgcaact aacaaaataa aaatttgccc tagctgactc
     1081 acactcccat tagggattac attgtcgaaa ataaacccca tagaaatagg tacgaaaagc
     1141 cctagtagtg cacttagaat tccaataaat aaaaaaaagt ataaatcttt ctttgcaaat
     1201 tgaaaaccaa attttattaa tgtttttgca gttaaagcac cgtcaggaaa tggggtgaaa
     1261 aatgaaatca catcattctc aaacttatga gcattttgct ttgtgactgc ttcttttgtt
     1321 tgtgttttta cattaactgc aacgtatcca tattgtcctt tagggattaa agctataggt
     1381 gtattatcat ctaaataaga caaatatgca ctacttctgg ttttaaacca atctttagta
     1441 agcttaactt gttttgacct tacatgtgat ccccgtaata tattttcaaa atttgaatat
     1501 ctgggattct caacaaaaac acgcttaaaa ttaatctttt caaatttccc tattaatttt
     1561 aagcaagcca ataaatagtc atcatcatca tttgaaataa cttctttagc tttaggattg
     1621 gcaatcctca taaggctttc gtacgaagtt tctctttgtt cgttattatt ctttatacta
     1681 cggtttacat tgataactct ttcttgcttt actaaatcaa gaagcattgt gtcaatatca
     1741 aaaataacag aataaaaatc gagataatct gagaggaaag aaggggaagt tcttaagaca
     1801 ttaagtgtat ttgaaacata aaactccgtt cctttttcta tttgatacca tagtttacta
     1861 gtagccggaa aaactttaaa atcatctgtc tcaattctat taaaaacctt taatttagtt
     1921 ggttttgtaa caagccagta gcctcctttt gtgtctatag gggggaaact tccagtttgt
     1981 tcagcaatat ttttttttgt gag
//
LOCUS       DASCQP010000166         3333 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000664133, whole genome shotgun sequence.
ACCESSION   DASCQP010000166 DASCQP010000000
VERSION     DASCQP010000166.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3333)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3333)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3333
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000664133"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..447
                     /locus_tag="QF480_02785"
     CDS             <1..447
                     /locus_tag="QF480_02785"
                     /EC_number="3.2.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018710266.1"
                     /note="Catalyzes the hydrolysis of AMP to form adenine and
                     ribose 5-phosphate using water as the nucleophile; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP nucleosidase"
                     /protein_id="HJN05520.1"
                     /translation="LPIAAIRGEGTSNDYLPMRVPALPAFSLQKAISTTIREFKKDYW
                     TGTVYTTNRRVWEHDSKFKKYLQKTRSMAIDMETATIFTVGFVNEIPTGALLLVTDQP
                     MIPEGIKTIESDKKVSKDFVEEHLQIGVESLKQLINNGVTVKHLRF"
     gene            450..1454
                     /gene="holA"
                     /locus_tag="QF480_02790"
     CDS             450..1454
                     /gene="holA"
                     /locus_tag="QF480_02790"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR01128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HJN05521.1"
                     /translation="MKYEHIIRDIQNNIFSPVYFLSGEEPYYIDSITSLLEDSILDEG
                     LKGFNQTVIYGRDVSVKEVVDLSRRYPMMGNYQVVIVKEAQYLNQIENLEQYIAAPLD
                     TTILIIAYKYKKVDKRKTYYKKMVASKSTIVFNSEKLRDYSVPNWIESEIKARGYSIS
                     PVALLLMSEYLGNDLGKISNEIDKLVINLSEQSNITETEIEQNIGISKDYNLFELQNA
                     LSKKDQLKAHRIIQYFEANPKDHPLQMISVMLHNYFMKIFLYHNIKNKEPNKIASELS
                     VPPFFVKDYIRASKSFSPIKIKEIISKIRTLDLKSKGVGNNNATSYGELKELVYRVMN
                     "
     gene            complement(1494..2249)
                     /locus_tag="QF480_02795"
     CDS             complement(1494..2249)
                     /locus_tag="QF480_02795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009136387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HJN05522.1"
                     /translation="MNKITLITGATSGIGRSCAYLFAQNNHDLILIGRRKNRLDEISG
                     ELKSNYNIQVLQLTLDVRDNEAVKKAISTLPDEWKLIEILINNAGLAVGLNTLQDGDV
                     DDWERMIDTNIKGLLYMSRALLPMFVQQNRGHVINIDSIAGKEVYTNGNVYCASKHAV
                     DALTKSMRDLVKHGVKVTQVAPGAIETEFSLVRFKGDKDQADNIYKGFKPLSPDDIAN
                     VVYYTTTLPAHVNINDIVIMPTAQASATVFNKD"
     gene            complement(2319..3128)
                     /gene="ispE"
                     /locus_tag="QF480_02800"
     CDS             complement(2319..3128)
                     /gene="ispE"
                     /locus_tag="QF480_02800"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: protein motif:HMM:TIGR00154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050515 - 4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase activity
                     [Evidence IEA];
                     GO_process: GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HJN05523.1"
                     /translation="MICFPNAKINLGLSVIEKRSDGMHNIETCFVPIPLFDILEILPS
                     NNFEIEDFGIPITCAPNDNLIIKAWNLLLSLNPDIHPVKVCLFKNIPIASGLGGGSSN
                     AAFFLKEMNKIFNLGFSLNYLELLASEIGADCAFFIKNTTTIASGIGNVFKSIENPVS
                     GMIVTVIFPQIQISTKDTFLKLKPKNHSNLIKVLMDKNSNWKNELSNDFEEVIFKDFP
                     EIGHIKNLLYKSGAVYSSLTGSGSAMYALSKIPLDIKGLMDKYFTWSGIIV"
BASE COUNT         1163 a          541 c          555 g         1074 t
ORIGIN      
        1 cttcccattg ccgccattag gggtgaaggc acatcaaacg attatttgcc aatgcgtgta
       61 cctgccttgc ctgcttttag tctgcaaaaa gctatctcaa ctactattcg tgagtttaaa
      121 aaagattatt ggacaggaac cgtttatact acaaaccgcc gggtttggga acatgattct
      181 aaatttaaaa aatatctgca aaaaacacga tcgatggcaa ttgatatgga aacggcaacg
      241 atatttacag ttggttttgt taatgaaatt ccaacagggg cacttctcct cgttaccgac
      301 caacccatga ttcctgaagg aattaaaacc attgagagcg acaaaaaagt tagtaaagat
      361 tttgttgaag aacatttaca aattggtgtt gaatcgctaa agcagcttat aaataacggt
      421 gttactgtta aacatctgag attttagttt tgaaatacga gcacataatc agagatattc
      481 agaataatat cttctcacct gtatattttt tatcaggtga ggaaccgtat tatattgata
      541 gcataacatc attattggaa gatagcatac ttgatgaggg actaaaaggg ttcaatcaaa
      601 cagtaatata tggcagagat gtttctgtaa aggaagttgt tgatttaagc aggcgatacc
      661 ctatgatggg aaattatcag gtggttatcg ttaaagaagc acaatatctg aaccaaattg
      721 agaatcttga acaatatatt gctgcacctc ttgatactac aattcttatt atagcataca
      781 agtacaaaaa agttgataaa cgaaaaacat actataaaaa gatggttgct tcgaaatcaa
      841 ctattgtttt caattcggaa aagcttagag attattctgt acccaattgg attgagtcgg
      901 agataaaagc acgaggatat tccatttctc cagttgcatt gttacttatg tcggaatatc
      961 ttggaaatga cctaggtaaa atttcaaatg aaattgacaa attggtaata aacctgagtg
     1021 agcagtcgaa tatcactgaa actgaaatag aacaaaatat tggaattagc aaggattata
     1081 atttatttga attgcaaaat gcattaagta aaaaagatca acttaaagct catcgtatta
     1141 ttcaatattt tgaagcaaat cccaaagatc atcctctaca aatgatctca gttatgctgc
     1201 ataattattt catgaagatc tttctgtatc ataacattaa aaacaaagaa ccaaataaga
     1261 ttgcttctga attaagtgtc cctccatttt ttgttaaaga ttatattcgg gcgtccaaat
     1321 cattttctcc tataaaaata aaagagataa tttcaaaaat acgaacactc gacttaaaaa
     1381 gtaaaggtgt tggcaataac aatgctacga gttatggaga gctgaaagag ctggtttata
     1441 gagttatgaa ctaaagatta ccaaataata aaaaattaac agcacttcac ctgctaatcc
     1501 ttattaaaaa ctgtagcact cgcctgagct gttggcatga ttacgatatc attgatgtta
     1561 acgtgggcag gtaatgtggt tgtataataa acaacatttg caatatcatc tggggaaagc
     1621 ggtttgaatc ccttataaat attatcggcc tgatccttat cacctttaaa acggacgagg
     1681 gagaattctg tttcaattgc tccaggtgca acttgtgtta ctttgacgcc atgtttgacc
     1741 agatcacgca tggacttagt aagtgcatca acagcatgtt ttgaagcaca atatacattt
     1801 ccattggtgt aaacttcttt tccggcaatt gaatcaatat taattacatg gcctctattt
     1861 tgttgaacaa acattggcaa taatgctctc gacatataaa gtagcccctt aatatttgta
     1921 tctatcattc tttcccaatc atcaacatcc ccatcctgta aagtatttag gcctacagcc
     1981 aaaccagcat tattaataag tatctcaatt agtttccatt catcgggtaa agttgagata
     2041 gcttttttta cagcttcatt atctcttacg tctaaagtta attgaagtac ctgaatatta
     2101 taatttgatt ttagttcacc tgaaatttca tcaaggcgat tttttcgtct tcctattaat
     2161 attaagtcat gattattttg tgcaaagaga taagcacagg aacgacctat accgcttgtt
     2221 gcacccgtaa taagagtaat tttattcatg tttgttgatt aattcaattg aaggttgaaa
     2281 attaataaaa tttaaattga aatagacctc aaagggggtc aaactataat tcctgaccat
     2341 gtgaagtact tatccattaa cccttttatg tctaaaggta tttttgatag tgcatacata
     2401 gctgatccgc taccggttaa agaagagtag acggctccag atttatataa tagatttttg
     2461 atatgtccta tttcaggaaa atccttaaag atgacttctt cgaaatcatt gctcagttca
     2521 tttttccagt tagaattttt atccattaaa actttaatca gattagaatg attttttggt
     2581 tttagcttta aaaaagtatc ttttgttgaa atttgaattt gaggaaaaat tacagttact
     2641 atcattccag aaacaggatt ttcaatagat ttgaatacat tcccaattcc tgaggctatt
     2701 gtagttgtgt ttttaataaa gaatgcgcaa tcagcaccta tttcagaagc caataattcg
     2761 agatagttta atgaaaagcc aagattaaag atcttattca tttcttttaa aaaaaatgca
     2821 gcatttgatg atcctcctcc tagtcctgat gcaataggta tatttttaaa taaacaaact
     2881 tttacaggat gaatatctgg atttagtgac aaaagcaagt tccaggcctt aattatcaga
     2941 ttatcatttg gcgcacaagt aattggtata ccaaaatctt caatttcgaa attgttggat
     3001 ggtagaattt ccagaatatc aaataatgga ataggtacaa agcaggtctc aatattatgc
     3061 attccatcag aacgcttttc tattaccgat aatccaagat ttattttggc atttggaaag
     3121 caaatcataa tagtaaagaa aaaatataat ctttcagtta caaaaatata agaaaacagc
     3181 aataaaaaaa ccttacatct ggtacgctgt aaggtccttt gggcgggctt ttaccggaaa
     3241 ttaaatccga ttaaaggaaa aaggatcgct cattaataat tgaataaagt cttaatttct
     3301 ttttgccaat cggctcaaaa aaataaactt tat
//
LOCUS       DASCQP010000167         2313 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000667021, whole genome shotgun sequence.
ACCESSION   DASCQP010000167 DASCQP010000000
VERSION     DASCQP010000167.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2313)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2313)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2313
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000667021"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..350
                     /locus_tag="QF480_02805"
     CDS             <1..350
                     /locus_tag="QF480_02805"
                     /inference="COORDINATES: protein motif:HMM:NF013909.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HJN05524.1"
                     /translation="IPIKEYLFLVKQTLGTKFIKHNQLIERPVKNVAVCGGSGSFLID
                     DAARHNADLFITGDVKYHEFFEYSGNMTIADAGHYETEHLIKELLYTVLKKKIPNFAL
                     QISKKNANPIFFL"
     gene            372..1148
                     /locus_tag="QF480_02810"
     CDS             372..1148
                     /locus_tag="QF480_02810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005856302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-type zinc ribbon domain-containing protein"
                     /protein_id="HJN05525.1"
                     /translation="MAKAKVTKDEDVSVEQKLIALYTLQQIDSQVDKIKIIRGELPLE
                     VEDLEDEIAGLDTRIANFHKEEEEFNNSIVEQKGVIKDSEALITKYKEQQMNVRNNRE
                     YDSLTKELEFQALEIELAEKKIKESVYKIELINTEIQTAEEKLKDRNLDLEAKNKELN
                     DIVKETVKEEEKLVEKSAKNEKFIEDRLLSAYKRIRMNARNGLAVVQIERDACGGCFN
                     KIPPQHQLDIRVHKKIIVCDYCGRILVDNEVAELVEGSMS"
     gene            1334..>2313
                     /locus_tag="QF480_02815"
     CDS             1334..>2313
                     /locus_tag="QF480_02815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05526.1"
                     /translation="MINENVKEAYSNILSLRFDEAMKRIQAEKIINPTNVFIPYLENY
                     IDFLKVTISEDEYLFDSIERKVSTRINEVKKLNDTSRFKNYFIGNINLQWATANLKFG
                     NYATGAIKINRAYRLLEENNREFPDFIPNSITLGVLHIMIGLVPDSYSWILDLISIKG
                     TVAQGQKELIKAYEVCQNNPDYDFLEDEILFYMGMVNLNLNPDPEFTDYLISKLKDSY
                     GRNLMNTYLAINAMMKNGRNEEALELFATIDKTINYYPFYYLDYLHGECFLRNLKTSM
                     AVKEYHKFLVNFKGQNYIKDAWQKIAWAELLDNDTASYLKNMQQVLNYGKG"
BASE COUNT          895 a          320 c          416 g          682 t
ORIGIN      
        1 ctatacctat caaagaatat ttatttctgg taaaacaaac actcggtaca aaatttataa
       61 aacacaatca gttaattgaa aggcctgtta agaatgttgc tgtttgtggg gggagtggaa
      121 gctttttgat tgatgatgca gcgagacaca atgccgatct gtttataact ggtgatgtta
      181 aatatcatga attttttgaa tattctggaa atatgactat cgcagatgca gggcattacg
      241 aaacagaaca tctcataaaa gaactattat atactgtatt aaagaaaaaa attcctaatt
      301 ttgcactcca aatttcgaaa aaaaatgcta accccatttt ttttctgtag taaactgaaa
      361 ataaagttat tatggcgaag gcaaaagtta caaaggatga agatgttagt gtagaacaaa
      421 aactaattgc actatataca ttacaacaaa tcgactctca agtagataaa ataaaaatca
      481 tcaggggaga attaccactt gaggtggaag atcttgaaga tgaaattgca ggattagata
      541 cacgtattgc aaacttccat aaggaagaag aagaatttaa taattcaatt gttgagcaaa
      601 aaggtgtgat caaggatagt gaagccttaa ttacaaaata taaggaacag caaatgaatg
      661 ttagaaataa ccgagaatat gattcactaa ccaaagagct ggagtttcag gcattggaaa
      721 tagaacttgc tgaaaaaaaa ataaaggaat cagtatataa aattgagctt atcaatactg
      781 aaatccagac agctgaggaa aagttaaaag acagaaactt agatcttgag gcgaagaata
      841 aggagttaaa cgacattgtt aaagaaacgg tgaaagaaga agaaaaactt gtggaaaaat
      901 ccgccaaaaa cgaaaaattc attgaagacc gtttgttaag tgcgtataaa cgtattagaa
      961 tgaatgcacg aaatggttta gctgttgtac aaattgaaag agatgcctgt ggtggatgtt
     1021 ttaacaaaat acctcctcaa catcaattgg atattcgtgt tcacaaaaaa ataatagttt
     1081 gtgattattg tggacgtata cttgttgata atgaagttgc agaacttgtt gaaggaagca
     1141 tgagctaaaa attattcgta ctaatccaac atttaaagga ttaagctgat atcattcggc
     1201 acataaaagt tcaagagagg ggcatgaaat tcatgcccct tttttttata tttttacaaa
     1261 tgtcatgact aaatctttaa tcgtattaat taccctcaac ttattggtta cctgcttatt
     1321 tgcacagaat gtaatgatta acgagaatgt caaagaagca tattcaaaca tattatctct
     1381 acgatttgat gaagcgatga aaagaattca ggctgaaaaa atcatcaatc caacaaatgt
     1441 ctttattcca tatcttgaaa attatataga ttttttaaaa gtaactataa gtgaagacga
     1501 gtatctcttt gactcaatag agagaaaagt ctctactaga atcaatgagg ttaaaaagct
     1561 taatgacaca tcgagattta aaaactattt tattggaaat attaatttgc aatgggctac
     1621 cgcaaatctt aaatttggta actatgcaac aggagctata aaaattaata gagcttacag
     1681 attattagaa gaaaataacc gtgagttccc tgacttcata cctaactcaa taacgctcgg
     1741 tgtactgcac attatgattg gattagttcc tgattcttac agttggatat tagatcttat
     1801 ttcaataaag ggaaccgttg cgcaaggaca aaaggaatta attaaggcat atgaagtatg
     1861 tcaaaacaat cctgattacg attttcttga agatgaaata ttgttctata tgggaatggt
     1921 taacttaaat ctgaatcccg atcctgaatt tacagactat ctaatttcta aacttaagga
     1981 ttcttacggt cgaaatttaa tgaacacata ccttgcaatt aatgcaatga tgaaaaatgg
     2041 cagaaatgaa gaagctctgg aattgtttgc cacaattgat aaaaccatca attattatcc
     2101 attttactac cttgattatc tgcatggaga atgctttctt agaaatttaa aaacaagtat
     2161 ggcagtaaaa gagtatcata aatttttagt aaactttaaa ggtcagaatt atataaaaga
     2221 tgcgtggcaa aagattgcat gggcagaact tcttgataat gatactgcaa gctatcttaa
     2281 gaatatgcaa caggttttaa attacggaaa agg
//
LOCUS       DASCQP010000168         1622 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000668517, whole genome shotgun sequence.
ACCESSION   DASCQP010000168 DASCQP010000000
VERSION     DASCQP010000168.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1622)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1622)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1622
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000668517"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            139..939
                     /locus_tag="QF480_02820"
     CDS             139..939
                     /locus_tag="QF480_02820"
                     /inference="COORDINATES: protein motif:HMM:NF019342.3"
                     /note="Members of this family of hydrolases with an active
                     site Cys residue belong to MEROPS family C26; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HJN05527.1"
                     /translation="MLRQIILASGFIIAAAFIFTSCETETSQQIKIAISKEKSEKSTT
                     KYANWLLRHNDQIVYYNLYPLGIDSAVKLLKTCNGLLLTGGEDVFPGNYGKINDTARC
                     GSFDRYRDSLEFALIENAITSKMPIFGVCRGEQILNISQGGTLYIDIPTDYDTTVKHR
                     NQDWSRAYHPIRLVNNTSIFDICKGNMGGDVVTNHHQGIEKLGEGLLISAFAEDNFPE
                     AIEWIDTTGHAFLMAVQWHPEAMDTLHPLSAPLARKFLLEASKYNANN"
     gene            958..>1622
                     /locus_tag="QF480_02825"
     CDS             958..>1622
                     /locus_tag="QF480_02825"
                     /inference="COORDINATES: protein motif:HMM:NF014740.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis protein"
                     /protein_id="HJN05528.1"
                     /translation="MYQTGGDQQTILITGSTGFVCKYFVSKLLLYSDFNIVVTYINTT
                     GSYEDNDRLTFEKADLLKPESFEAIFNNYKPNHIIHLAAMARLSEGEKHPVKATRTNF
                     LATVFLAKLCMKYNVESFLFTSSNLAQNAISVVGICKLLVEQYFQKINSQTTKFISLR
                     MPNVIDSNGAVTLIFKKQIENNQPITITHPDMSRMFVTGERAADFLYFLLNEGLNKGV
                     YVS"
BASE COUNT          545 a          269 c          282 g          526 t
ORIGIN      
        1 ttataactac tctcacaata aacattgact aaaattttgc tatgcaaaag taattaattg
       61 tagagcttta ttagcacatc ataataaaca catcgatcaa attactaatt ttgacatctt
      121 cattctaaaa tctgacttat gttaagacaa attattttag cttctggttt tattattgca
      181 gccgcattta tttttacatc atgtgaaact gaaacctcgc aacaaataaa aattgcaatc
      241 tctaaagaaa agtctgaaaa aagcactact aaatatgcca attggttatt gcgccataat
      301 gatcaaatag tatattataa tctctaccct ttaggaattg attcagcagt gaagttgtta
      361 aaaacttgta atggcctgtt gcttaccggt ggtgaggatg ttttcccagg aaattatggc
      421 aagattaacg acactgcccg atgtgggagc tttgacagat atcgtgacag ccttgaattt
      481 gcattaattg agaatgcaat cacaagcaaa atgcctattt ttggtgtttg ccgaggagaa
      541 cagattttga atatctcgca aggaggaact ctttatattg atattcctac tgactatgat
      601 acaaccgtta aacatagaaa tcaggattgg agcagagcat accatcccat taggcttgta
      661 aacaatacca gcatatttga tatttgtaaa ggcaacatgg gaggtgatgt ggttactaat
      721 catcaccagg ggattgaaaa acttggagaa gggctactta tttctgcttt cgcagaagac
      781 aattttccag aagcgattga gtggattgat actaccggtc atgcgttctt aatggctgtt
      841 caatggcatc cagaagctat ggatacatta catcctttgt cggcaccttt ggcgcgtaaa
      901 tttctacttg aagcctctaa atacaatgct aacaactaac aaattatttg tatactaatg
      961 tatcaaactg gaggcgatca acaaactatt ttaatcacag gaagtacggg ttttgtttgc
     1021 aaatactttg ttagtaaatt gttgttatat tcagatttca atattgttgt tacttacata
     1081 aacacaacag gaagctatga agataatgat aggttaactt ttgaaaaagc tgatttatta
     1141 aaacctgaat catttgaggc tatatttaat aactacaaac caaatcatat tattcattta
     1201 gcagctatgg cccgtctttc ggaaggagag aaacaccctg taaaagcaac tagaacaaac
     1261 tttttagcaa cagttttctt agccaagctt tgcatgaagt acaatgtaga atcatttctt
     1321 ttcacctcat caaatctggc tcaaaatgca atttctgttg ttggtatttg taagctttta
     1381 gttgaacagt attttcaaaa aataaactca caaactacaa agttcataag tttaagaatg
     1441 cctaacgtga ttgatagtaa cggtgccgtt actttaattt ttaagaaaca aattgaaaat
     1501 aatcaaccca taacaattac tcatcctgat atgagtagga tgtttgttac aggtgaacgt
     1561 gcagcagatt ttttgtattt tcttcttaat gagggtctaa acaaaggtgt ttatgtgtcg
     1621 ta
//
LOCUS       DASCQP010000169        11654 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000674146, whole genome shotgun sequence.
ACCESSION   DASCQP010000169 DASCQP010000000
VERSION     DASCQP010000169.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 11654)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11654)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11654
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000674146"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            132..722
                     /gene="coaE"
                     /locus_tag="QF480_02830"
     CDS             132..722
                     /gene="coaE"
                     /locus_tag="QF480_02830"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: protein motif:HMM:NF013301.3"
                     /note="Dephospho-CoA kinase (CoaE) performs the final step
                     in coenzyme A biosynthesis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004140 - dephospho-CoA kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HJN05529.1"
                     /translation="MKKVALTGNIGSGKSIVASMFSVFGISIFNADSEARKVYGENEV
                     KDKMISIFSNVILNPKGEIDTKKVASIIFNDKEALKIVNSIIHPIVLEKYNNWCSNHN
                     SEIYTIHEAAIIFENNLQKKFDVVINVSAPLDIRIKRVMERDNTTEELVRERMANQLS
                     DKVKCELSQFVVYNDGKNFLIPQVNLIHKKLISDQL"
     gene            727..1233
                     /locus_tag="QF480_02835"
     CDS             727..1233
                     /locus_tag="QF480_02835"
                     /EC_number="2.7.1.71"
                     /inference="COORDINATES: protein motif:HMM:NF013375.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HJN05530.1"
                     /translation="MKRIYIIGFMGVGKSTAGKKLASRLGWEFLDTDATFEKKYKVSI
                     NTFFEKYGEKLFRKLEHDVLKSTFNLNNYVISTGGGMPCYLDAMYQINRNGISVYLDM
                     NENAILHRLQNSKQKRPLVVYKPENELTDFIKEKLIDRIPYYSQATISVPAISFNLDE
                     LLKRIKSI"
     gene            complement(1305..2732)
                     /gene="rlmD"
                     /locus_tag="QF480_02840"
     CDS             complement(1305..2732)
                     /gene="rlmD"
                     /locus_tag="QF480_02840"
                     /EC_number="2.1.1.190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009017418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(1939)-C(5))-methyltransferase
                     RlmD"
                     /protein_id="HJN05531.1"
                     /translation="MSRRKQPLPLFEHLEIIDAGAEGKCIAKVDEKVIFVPFASPGDI
                     VDVQVTKKRKSYLEGSITKFHTYSDQRSDPRCSHFGLCGGCKWQHITYNNQLANKQKQ
                     VKDNFDRIAKVPVAEFLPIIGADNEYYYRNKLEFAFSDRRWLTNMDIPKEEGGPQNTN
                     GLGFHLPGRFDKILDIDHCYLQKDPSNDIRMAIRKYAIDNNLDFYNVRNHEGLLRNLI
                     IRTSSTGDLMVILVFRYDDLDIAQMLQTISDKFPEITSLMYVINEKQNDTIWDRDIKL
                     ANGKPYLLEEMKSPDANTSLKFKVGPVSFYQTNPDQAFKLYKLAFDFAGFKGNELVYD
                     LYTGTGTIAAFIASSVNKVIGIEYIVEAIEGAKENAAMNNIDNIEFFAGDIVKILTPE
                     FISQNGKPHIIITDPPRVGMHEKVVKQILVSEPEKIVYVSCNPSTQARDIALLSEKYD
                     VLKSQAVDMFPQTHHVENVALLVKR"
     gene            complement(2786..4573)
                     /gene="argS"
                     /locus_tag="QF480_02845"
     CDS             complement(2786..4573)
                     /gene="argS"
                     /locus_tag="QF480_02845"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014224988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HJN05532.1"
                     /translation="MIDQILTNTLHKAVLNLYGQELPGKLAQVQKTRPEFEGDFTVVV
                     FPLLKISKSGPEKTAEDIGNYMVNKLFEVTEYNIIKGFLNLVISNNYWIDFFNQTLND
                     NNFGRHNEKSGDPTVIEFSSPNTNKPLHLGHIRNNLLGWSVSEILINNGQNVKKVNLI
                     NDRGIHICKSMVAWQKWGNNSTPESSNKKGDKLVGDFYVLFDKKNKEEISVLIDEGIE
                     IDKATNNTPLLNEAKQMLKGWEDGNNEIRDLWSTMNQWVYKGMDATYNRMGIDFDKIY
                     YESETYLLGKKLVEEGLKKGILFQKNDGSIWCDLSEDGLDEKLLIRADGTSVYMTQDL
                     GTAQLRYDDYHPSELIYVVGNEQNYHFDVLKLILQKLGRIWAEHIHHLNYGMVELPYG
                     KMKSREGTVVDADDLMDEMYATAVKTSEELGKFDDFTNEEAVELYNMISLGALKYFIL
                     KVDPRKTMTFNPAESIDFNGNTGPFIQYTHARIRSIIRKSKKINIESNQNINAEYNFE
                     PKEVSVLKLLHDYPGITKQAAVSLSPALVANYAYELAKEYNQFYHEVVILKETEETKR
                     NFRVALSKLTGNTLKSSMALLGIQVPERM"
     gene            4830..5390
                     /locus_tag="QF480_02850"
     CDS             4830..5390
                     /locus_tag="QF480_02850"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024698.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HJN05533.1"
                     /translation="MLEKDNIQLRVPEPEDVEFLLKMENDSNLWHISNTHNPFSRFDI
                     EQYILLADKDIYSANQLRFMVDYKEEEQTRTIGAIDVFDFNAHNRRAGIGISIIENKR
                     QKGYAGTALDILIEYMFGHLNLHQIYCNIEKNNTESIGLFTSRGFKETGIKRDWNLRN
                     NKWIDEHLFQLINSKSIHKSSNQNQP"
     gene            5393..6475
                     /gene="mltG"
                     /locus_tag="QF480_02855"
     CDS             5393..6475
                     /gene="mltG"
                     /locus_tag="QF480_02855"
                     /inference="COORDINATES: protein motif:HMM:TIGR00247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008932 - lytic endotransglycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HJN05534.1"
                     /translation="MPYYHSNYGVTRKQKKQYWKLLVWVIIIIVLVGSSGGYLFYQII
                     YKPNVWTPDGKNVSIYIPTESNFEDVKQILFEKGLIVHRNNFIWWAEKKKYTDLIKPG
                     HYVLKNNMTNQDLIKLLRSGDQEPVKVIFNNIRDIYQLAGRISQQIEADSSSIVSELT
                     NTKELNKMSMTPENISIIFIPDTYEFYWNTSAKGFVTRMHEEYLRFWNANRTGKAEEL
                     EMTIPEIVTLASIVEKETNKNDEKPMIAGVYINRLDKGWRLQADPTLIYALNDYNIKR
                     VLNIHKEFDSPFNTYKHGGLPPSPICIPSISSIEAVLNNQNEGYLFFCAKDDLSGYHV
                     FARSNTQHNKNARKYQKALDKMRIYK"
     gene            6589..7521
                     /locus_tag="QF480_02860"
     CDS             6589..7521
                     /locus_tag="QF480_02860"
                     /inference="COORDINATES: protein motif:HMM:NF021554.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2279 domain-containing protein"
                     /protein_id="HJN05535.1"
                     /translation="MKAFWKKYLHIILVFVIIGLCLLRASSQTQQIYPDSIIKKRLNT
                     VIYTGAGLYGATLGVLYFAWYKDNTLSSFHWYNDNNAWLQVDKVGHVTTAYVISNYAF
                     WSLRWAGVNNNKSALYGGLMGWSALTVIELLDSFSEEWGASPGDLIANTAGAAFFTGQ
                     QLLWKEQRIRLKFSYHATQFPQYRPDLLGETGLQSMLKDYNGQTYWLSANISSFIRKE
                     TKFPQWLNVSVGYGATGMIGSFSNPPEWDGKKMPHFNRTRQYYFSFDVDWTRIKTNSS
                     FLRFVFKAFSFIKVPAPTIEYNKEDQFVFHLMFF"
     gene            complement(7523..10027)
                     /locus_tag="QF480_02865"
     CDS             complement(7523..10027)
                     /locus_tag="QF480_02865"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HJN05536.1"
                     /translation="MRLNHGGYLFINTYNGRALIFDGVKIIGEKDIRNMIDPDGLNLF
                     EIELQTIKNSDGGYFSSTFKRLDSFNPVPKLSYVIGYKEWEWIIGAGIYLDDIDLFVQ
                     KTKNQYQAILFKKVLYIVLLFIVLLIIVFVVSKSLSGFIRREFLVFMSFLNKKSEVDS
                     FIDINMLQVQEFRVLAHSVNAMINKRRVAERLLKKESDKAHKYLDVAGVIILALDTKG
                     NVTLINKRGCETLGLNEAEIIGKNWFKNFVPPADKHKLSTRFSKVISGSSKTKFLNGE
                     NQIVTQSGEHRIISWQNTLLYDSNDKITGSLSSGHDITEGRLLEASYFESEEKYKLLF
                     EITSDPILIIGRNDTFIDCNNAAVEILKFKDKKEIIGTHLVNLSPTKQPDGSLSVLKA
                     KEMIAKARKEGYIRCEWLQIDKNKKPFYVDASLTLVPISGVEYLYVVWRDISERKKQA
                     QELIIAKEKAEQSDNIKSSFLHNMQHEIRTPLNTMMGFSQLLKQQDLDSGDIDSYFDA
                     IISSGNQLNKIIDDIIDFSKLQLGFILSSNKTIELKTLLSEIFKENYPNINNKPVKFL
                     INTFASNKNTVVETDLKRLKQIMVHLIDNAFKFTAEGVVEFGYNISAKNITFYVSDTG
                     VGIEKQHFQSIFERFTRLTHKNPEMLYGGNGLGLSISKAILGFLGGKIWVESEKGKGS
                     KFLFTIPYKPLEISYKIQKKSFGSSNITVVTINKSWFTRISKAVRETGVKLTHITNGL
                     EAIEFCQKNYKTDLMIMDINLSEMNGLIATKAIKAFKMDLPIIALVTAEKKNMTKEDA
                     LIAGCDDYITMSQSDKDIQLTLSLYLKTNILALTKG"
     gene            complement(10028..10309)
                     /locus_tag="QF480_02870"
     CDS             complement(10028..10309)
                     /locus_tag="QF480_02870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05537.1"
                     /translation="MKRIKISIKRSSFFILLATATFTMFSISVLWIVTEIVKSRQNLV
                     DAKISYQTEQRMLLKDEVKSVVSIINFSRKYSDIKSKDELQNKILDYVS"
     gene            10647..11459
                     /locus_tag="QF480_02875"
     CDS             10647..11459
                     /locus_tag="QF480_02875"
                     /inference="COORDINATES: protein motif:HMM:NF013954.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004040 - amidase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucosaminidase domain-containing protein"
                     /protein_id="HJN05538.1"
                     /translation="MRNYSKCLPLLFVSLFAFLYVSCNNDSGKEIKIIEKPINSANDI
                     IPITDSLVIPYVYTSAVSLNDLPVAEKKKKFFDMMLPAVLVAKEELAIVLQRVNSLAL
                     KAELTPEDTLFIDKLNKKYDATNMELLKSRLHTFPVSIVLAQAAIESAWGTSRFFLEA
                     NNPFGLWSFNPHQERIEASSTRHGKKVYLRKFNNLEQAIDAYYTTLSTGPFADFRAER
                     LKTNDPFVLINYLIDYSERREAYVEEIKQVITGNNLVKYDSYRIAPKYIAKD"
BASE COUNT         3804 a         1942 c         1924 g         3984 t
ORIGIN      
        1 cactcaagtt taagcaccaa ccgttgttac catttctttt tttaagaagg gagtacgcac
       61 atgaaaattt aatctcttaa acttgatttt ttaattaatt gaaattaaaa catttaacga
      121 attatataca catgaaaaag gttgctttaa ctggtaatat tggaagtgga aaaagcatag
      181 tggctagtat gttcagtgta tttggaattt caattttcaa tgctgattca gaggcccgta
      241 aagtgtatgg cgagaatgag gttaaagaca agatgatatc gatattttct aatgttatct
      301 taaatcctaa aggcgagata gatacaaaaa aagtagcttc aattattttt aatgacaaag
      361 aggctttaaa aatagttaat agtataattc atccaatagt actagaaaaa tataataatt
      421 ggtgtagtaa ccacaatagt gaaatatata caatacacga agctgctatt atttttgaga
      481 acaaccttca gaagaaattt gatgtagtta taaacgtatc agctccactt gatatacgaa
      541 ttaaacgtgt tatggaacgt gataatacta cggaagaatt ggttagagag cgaatggcaa
      601 atcaactaag tgataaagtt aaatgcgagc tctcacaatt cgtggtttac aacgatggta
      661 agaattttct aattccccaa gtaaacttaa ttcataagaa acttatctcc gaccaacttt
      721 aggctaatga aaaggattta tataataggt tttatgggag ttggtaaaag cactgctgga
      781 aagaaacttg cgtcgcggtt gggttgggaa tttcttgata ctgatgctac gtttgaaaaa
      841 aagtataaag taagtattaa tacatttttt gaaaaatatg gtgaaaaact tttcagaaag
      901 ctagagcatg atgtgttaaa atcaactttt aatcttaata attacgttat ttcaaccggg
      961 ggagggatgc cttgctactt agatgctatg tatcaaatta atagaaatgg aatcagtgta
     1021 tatctcgata tgaatgagaa tgcaatatta catcgcttgc aaaattcaaa acagaaaaga
     1081 ccattagttg tttacaagcc tgagaatgag ctaactgatt ttatcaaaga gaagcttatt
     1141 gacagaattc catattattc tcaggcaact atatctgttc ctgcgatttc atttaattta
     1201 gacgaacttc tgaaaaggat aaaatctatt tgatagtaat tagtaacaac cataattagg
     1261 ataaatttca tgcttgtcct aatcctgtca ccagaaataa aattctatcg tttaaccaat
     1321 aatgcaacat tctctacatg atgtgtttga gggaacatat ccacagcttg cgattttaac
     1381 acatcatatt tctctgataa taaagcgatg tcccttgctt gagttgaagg attgcagctg
     1441 acgtaaacaa ttttttcagg ctcagaaact aatatctgct taactacttt ttcatgcata
     1501 ccgactcggg gtgggtcggt aataataata tggggttttc cattttgtga tataaactca
     1561 ggagtaagta tttttacgat atcgccggca aaaaactcga tgttatcaat attattcatt
     1621 gcagcatttt cttttgcgcc ttctattgct tctacaatat attcaatacc aataactttg
     1681 ttaactgaac ttgcaataaa tgctgctatt gtacccgttc cggtatatag gtcataaaca
     1741 agttcatttc ctttgaaacc agcaaaatca aatgctagtt tgtataattt gaatgcctgg
     1801 tcaggatttg tttgatagaa tgaaaccggt ccaactttaa actttaaact agtattagca
     1861 tccggagatt tcatctcctc gagtaaatat ggttttccat tggctaattt aatatcacga
     1921 tcccagatag tatcattttg tttttcatta attacataca tcaaggatgt aatctctgga
     1981 aacttatcac taattgtttg caacatctgg gctatgtcaa gatcgtcgta tctaaacaca
     2041 aggattacca ttaaatcacc tgttgaagaa gtgcgaatta tcaaattacg taataaacct
     2101 tcatgatttc taacattata gaagtcaagg ttattatcaa tggcatattt cctaatcgcc
     2161 atacgtatat catttgatgg atctttttga agataacaat gatcaatatc tagaatttta
     2221 tcaaatctac cgggtaaatg aaaaccaaga ccattagtat tttgcggacc accttcttcc
     2281 ttaggaatat ccatgtttgt tagccatctt ctatcagaaa atgcgaactc taacttattg
     2341 cggtaatagt actcgttatc cgcaccaata attgggagaa attccgcaac gggtactttt
     2401 gctatacgat cgaaattatc ctttacctgt ttttgtttat tagccagttg gttattgtat
     2461 gtgatatgtt gccatttaca tccaccacat aacccgaagt gtgaacaacg aggatctgat
     2521 cgttggtcag aatacgtatg aaatttagtt atacttcctt caagatatga ttttcttttt
     2581 ttagtaacct gtacatctac aatatcccca ggggatgcaa atggaacaaa tattactttt
     2641 tcatctactt tggcaataca tttgccctca gctccggcat caattatttc aaggtgttca
     2701 aaaagtggaa gtggttgttt tctgcgtgac ataatttgag aattgtattt ggtgatttgt
     2761 tatttgtgat accaagtata atgcattaca ttctttcagg tacttgaatt cctaacaaag
     2821 ccattgatga ttttaatgta tttcctgtta attttgaaag tgctacacgg aagtttctct
     2881 tagtttcttc ggtttcttta agaataacaa cttcatgata aaactggtta tattctttag
     2941 caagctcata tgcataattg gcaacaaggg cagggcttag gctgacagct gcttgttttg
     3001 tgataccagg ataatcgtgc aataatttca gaactgatac ttccttaggt tcaaaattat
     3061 attcagcatt aatattttga ttactctcaa tattaatttt ttttgatttt cttattattg
     3121 atctgattcg tgcgtgagtg tattgaatga atggcccggt gttaccgtta aagtcaattg
     3181 actcggcagg gttaaaagtc atggtttttc ttggatcaac tttaagaata aaatatttca
     3241 acgcacctaa gctaatcata ttataaagtt caactgcttc ttcgttagta aagtcatcaa
     3301 acttaccgag ttcttcggat gttttaacag cagttgcata catctcatcc attaagtcgt
     3361 cagcatctac aacagttccc tctcttgatt tcattttacc atatggaagt tcaaccattc
     3421 catagttaag gtgatgaata tgttcagccc agattctgcc aagcttttgt aatatcagtt
     3481 taaggacatc aaaatgatag ttttgttcgt ttccaacaac atatattaat tctgatggat
     3541 gataatcatc atagcgtagt tgagcggttc ctaaatcctg agtcatatat actgatgtgc
     3601 cgtcagctct gataagcagt ttctcatcta gtccatcttc agataaatca caccatattg
     3661 agccatcgtt tttttgaaat aagataccct tcttaagtcc ttcctcaact agttttttgc
     3721 caagtaagta agtttcagac tcataatata ttttgtcgaa atcaataccc attctgttgt
     3781 aagtagcatc cataccctta taaacccact ggttcatagt gctccacaga tctcttattt
     3841 cattatttcc atcttcccaa cccttcagca tttgttttgc ctcatttaaa agtggcgtat
     3901 tattggtcgc tttatcaatc tcaattcctt catcgataag aactgatatt tcctctttat
     3961 tttttttatc gaaaagaaca taaaaatcgc caacaagttt atcgcctttt ttgttcgaac
     4021 tttctggagt agaattatta ccccattttt gccaggcaac cattgactta cagatatgaa
     4081 tacctctatc attaataaga ttcacctttt taacattctg accattattt attaatattt
     4141 cagagactga ccaaccaagt aagttatttc taatatgacc taaatggaga ggtttatttg
     4201 tatttgggga tgaaaattca ataacggtag gatcaccgct tttttcgtta tgacggccga
     4261 aattattatc attaagagtt tgattgaaaa agtctatcca ataattattt gatattacca
     4321 gatttaaaaa ccctttaata atattatatt ccgtgacttc aaatagttta ttaaccatgt
     4381 aattgccaat atcctctgcc gttttttctg gtccactctt agatattttt agcaatggga
     4441 aaacaacaac agtaaagtcg ccttcaaact caggtcgcgt tttttgaacc tgtgcaagtt
     4501 tacctggaag ttcttgccca taaaggttta aaacagcttt atgtaaagta tttgtaagta
     4561 tttggtcaat catctgatcg aagaattttc tgagtgcaaa agtagaaaaa aaaccagctg
     4621 agaatatttt ttaagcgggt tgatcaaaaa cctatgcgaa ttgagatttg tattttaaac
     4681 cagtaaccca tcacacattg tccagataca ccgaatacgt tatcggcata gttgatttac
     4741 accgataata ttaaaaattc aaggcaacat gtaagctttc atgaaaattt attttaaatt
     4801 tatcggtttt ttccacaata gtatacttaa tgctagaaaa ggataatata caattaagag
     4861 taccagaacc agaagatgtt gagtttttgc ttaagatgga gaatgacagt aatttgtggc
     4921 atataagtaa tactcataat cccttttcac gttttgatat tgagcaatat atattacttg
     4981 ctgataagga tatttactcg gctaatcaat tgagatttat ggttgattat aaggaagaag
     5041 aacaaactcg aaccattggt gcaattgatg tttttgattt taatgctcat aatagacggg
     5101 ctggaattgg gatttcaata attgaaaaca aaagacaaaa gggatatgca ggaacagctc
     5161 ttgatattct tattgagtac atgtttggcc atctcaactt gcatcaaata tattgcaata
     5221 ttgagaagaa caacactgaa agcatcggcc ttttcacgag tagaggattt aaagaaactg
     5281 gtattaaaag ggattggaat ttaaggaaca acaagtggat tgatgagcat ctttttcaat
     5341 taataaatag taaaagcata cataaatcta gtaatcaaaa ccaaccataa ccatgccgta
     5401 ttatcattca aattatgggg taacccgaaa acaaaaaaaa caatactgga aacttttggt
     5461 atgggtaata ataataatag tactagtagg aagttcagga ggatatttgt tttatcagat
     5521 aatttataaa ccaaatgtat ggaccccaga tggaaaaaat gtatcaattt atatcccaac
     5581 ggaatcaaat tttgaagatg taaagcagat actatttgaa aaaggattga ttgtgcatcg
     5641 caataatttt atttggtggg ccgaaaaaaa gaaatatact gatttgatta aacctggaca
     5701 ttatgtgtta aaaaataata tgacaaatca ggatcttata aagctactaa ggtcaggtga
     5761 ccaggaacct gtaaaagtaa tttttaataa tatcagagat atttatcagt tggctggtag
     5821 gattagccag caaattgaag ctgattcttc ttcaatagtt agtgagttga caaatactaa
     5881 agagctgaat aaaatgagta tgacacccga aaatatttca ataattttta tccctgatac
     5941 ctacgaattt tattggaaca catcagctaa aggatttgtg actcgtatgc atgaagaata
     6001 tttgaggttt tggaatgcca atagaactgg taaggctgag gagttggaaa tgactatccc
     6061 ggagatagta acattggctt caatcgttga aaaagaaacc aacaaaaacg atgaaaaacc
     6121 aatgatagct ggtgtttata ttaacagact cgacaaagga tggcggcttc aagctgatcc
     6181 tacactaatt tatgcactta atgattataa tattaaacgt gtattgaata ttcataaaga
     6241 gtttgattca ccgtttaaca cgtataagca tggaggatta cctccatcac ctatttgtat
     6301 cccatcaatt tcttcaattg aagcagtgct taataatcaa aatgaaggtt atcttttttt
     6361 ctgtgctaag gacgatttgt ctggttacca tgtatttgca cgctccaata ctcaacataa
     6421 caagaatgca cgaaaatatc agaaggcact agataaaatg aggatttata aatagaacta
     6481 acaattaaag tactaggctc gtctttgttc ttagctgaaa gaaagtgagg atatgccatt
     6541 gaaaagaaca atatcaactt acaaaattct cagcgaatat tcctaaatat gaaggctttc
     6601 tggaaaaaat atttacatat tattttagta tttgttataa tcggattatg tttactacgg
     6661 gcaagctcac aaacacaaca aatatatccc gattcgatta ttaagaagag attgaatact
     6721 gtaatttata ccggggcagg actttatggg gcaaccttgg gcgtacttta ttttgcttgg
     6781 tataaagata atactttatc ctcatttcat tggtataatg ataacaatgc ctggcttcag
     6841 gtagacaaag taggacatgt aaccactgct tatgttataa gtaattatgc tttttggtca
     6901 ctacgttggg ctggtgttaa caataataaa tcagctttgt atggaggttt aatgggatgg
     6961 tcagcactga ccgttattga acttcttgat tcattttcgg aagaatgggg agcttcacca
     7021 ggcgacctga tagccaatac agctggtgct gcctttttta ccgggcaaca attattatgg
     7081 aaggagcagc gtataagact caaattttca tatcatgcca ctcaatttcc acagtatcgc
     7141 cctgatttat taggagaaac aggactacag agtatgttga aggattataa tggacaaact
     7201 tactggttat cagcaaatat tagttctttc attagaaaag aaacaaaatt tccacaatgg
     7261 ttaaatgtat cagttggata tggtgctact ggtatgattg ggtcattttc taatccacct
     7321 gaatgggatg gtaaaaaaat gccacatttt aatcgtacgc gtcaatacta cttttcgttt
     7381 gatgttgact ggacccgtat taaaactaat tcatctttct tacgatttgt ttttaaggca
     7441 tttagcttta taaaagtacc ggcaccaact atagagtaca ataaggaaga tcaatttgtt
     7501 tttcatttga tgtttttcta gctcaccctt ttgtcagagc cagtatgttt gttttaagat
     7561 atagagataa tgtaagttga atatctttat ccgattgaga catagttatg taatcatcgc
     7621 atccggcaat taatgcatcc tccttagtca tattcttttt ctcagctgta actaatgcta
     7681 taattggcaa atccattttg aatgctttaa tggcttttgt tgcaataagc ccattcatct
     7741 cactaagatt aatatccatt atcatcaggt cggttttata attcttctga caaaactcaa
     7801 tagcttctaa accatttgtg atatgtgtga gtttaacgcc cgtttcgcga acagcttttg
     7861 atatacgggt aaaccaggat ttgttaattg taacaactgt aatattgcta cttccaaaag
     7921 atttcttttg tatcttgtaa gatatttcga gaggcttata aggaattgta aataagaact
     7981 ttgatccttt acctttttca gattcaaccc atatctttcc gccaaggaat ccaagtatag
     8041 ctttagaaat acttaatcca agtccgttgc ctccatatag catctccggg tttttatgag
     8101 tcaaccttgt aaatctctca aaaattgatt gaaaatgttg tttttcaatt ccaacccctg
     8161 tatcagaaac ataaaacgta atatttttag cggaaatatt atatccaaat tccacaactc
     8221 cttctgctgt aaatttaaaa gcgttgtcta ttaagtgaac cataatttgt tttagccgct
     8281 ttaggtccgt ttcaacaaca gtatttttat ttgaagcaaa tgtatttatt aagaatttta
     8341 ctggcttgtt attgatgtta ggataatttt ctttaaaaat ttctgacaat aatgttttta
     8401 actctatggt tttattagag cttaaaatga atcctaattg tagctttgaa aaatcaataa
     8461 tatcatcaat tattttgttt agctgattac ctgagctaat tatagcatca aagtaactat
     8521 caatatcgcc tgaatcaagg tcttgttgtt ttagtaattg tgaaaaaccc atcatagtat
     8581 ttaacggtgt tcgtatctca tgctgcatat tgtggaggaa ggatgattta atattatcgc
     8641 tttgttcggc tttttcttta gcgataataa gctcctgtgc ctgttttttc ctttcagaga
     8701 tgtcgcgcca aactacataa agatattcaa ctccagaaat ggggactaat gtgagtgatg
     8761 catcaacata aaacggtttt ttgtttttgt cgatttgtaa ccattcacac ctgatatagc
     8821 cttctttacg agctttggct atcatctctt tggcttttaa aactgacaat gagccgtcag
     8881 gttgtttggt tggagataaa ttaacaagat gggtaccgat aatttccttt ttatctttaa
     8941 atttcaggat ttcaactgca gcattattac aatctataaa agtatcgttt cttccaatta
     9001 tcaagatagg atcgctggtt atctcaaaca gcaatttata tttctcttcg ctttcaaaat
     9061 atgaggcttc taataacctg ccttcggtta tgtcatgtcc tgaactgagg ctgcctgtaa
     9121 tcttatcatt tgaatcgtaa agtaatgtgt tttgccaaga tattattcgg tgctctcctg
     9181 attgtgttac aatttgattt tcaccattca ggaactttgt tttactacta ccagatatta
     9241 ctttagaaaa tctagtggat aatttatgtt tatctgctgg tggaacgaag tttttaaacc
     9301 aatttttgcc tattatttct gcttcattca acccaagtgt ttcacatcct cttttgttta
     9361 ttaaagtaac attcccttta gtatctaagg ccaaaataat tacaccggca acatcaagat
     9421 acttgtgagc tttatcactt tcttttttaa ggagacgttc agcaacccga cgtttattta
     9481 tcatggcgtt cacagagtgt gccaatactc taaattcctg cacctgaagc atgttgatat
     9541 caataaatga atcaacctct gattttttgt ttaaaaacga cataaaaact aagaattccc
     9601 ttctgataaa tcctgacaga gatttagata caacaaatac tataattaaa agtacaataa
     9661 acaaaagaac tatgtaaagt acttttttaa acaaaattgc ttgatattga ttcttagttt
     9721 tctgaacaaa taaatcaatg tcatcgaggt aaatgccagc accaataatc cattcccatt
     9781 ccttataacc tatcacatat gacaattttg gaacaggatt gaatgagtca agtctcttaa
     9841 atgtagagct aaaataaccc ccatcagagt tcttaatagt ttggagttca atttcaaata
     9901 aattcaaacc atcaggatca atcatattcc taatatcttt ttcgcctata attttaactc
     9961 catcaaaaat taatgcacga ccgttatagg tgttaatgaa aagatagccc ccatgattta
    10021 atcttatcta actcacataa tccagtatct tgttttggag ttcatcttta gatttaatat
    10081 cgctgtattt acgtgagaaa ttaataattg aaacaacgga tttaacttca tctttcaata
    10141 acatacgttg ctcggtctgg taggagattt ttgcgtcgac cagattttgt cttgatttta
    10201 ctatctcagt aacaatccac agaacactta ttgagaacat tgtaaaagtg gctgtggcta
    10261 ataaaatgaa aaaagaactt cttttaatac ttattttgat ccttttcata aatttggtgt
    10321 gttaggctaa agtctctaaa ctaaacttaa tggcctctgc ttttcaaggt ttttacagta
    10381 ctctttggtt tcacggttgc actcaactta taacttcttg aaaatcacaa taacttgaat
    10441 cggttgtaac aatcattata cctcacctaa agtgcttgtg aatttggtta taatcatcct
    10501 gtccctttcc ttcgataaaa atcctgagat cctttttatg ctttcaatta taaaataaac
    10561 aaaagtaaca aattaatttt ttaagcccaa aatctgcatt tatcatataa aattatattt
    10621 ttggtataaa taatccaaaa gagagtatga gaaactacag caaatgtctt cctttattat
    10681 ttgtatcgct ttttgcgttc ctatatgttt catgcaacaa cgattctgga aaggaaataa
    10741 aaattattga aaaaccgata aactcggcta acgacataat tcctatcaca gattcactag
    10801 taataccata tgtatataca agtgccgttt ccttaaatga tttgcctgtt gctgaaaaga
    10861 agaagaagtt cttcgatatg atgttgcctg cagttcttgt agcaaaggaa gagcttgcaa
    10921 tagtattaca aagagtgaat tcacttgctc ttaaggctga attgacacct gaggacacgt
    10981 tatttattga taagttaaat aagaaatacg atgccactaa tatggaattg ctaaaaagca
    11041 ggcttcatac gtttcctgtt agtatagtcc tcgctcaggc agcaattgaa agtgcttggg
    11101 gaacatcgag gtttttcctt gaagcaaata acccttttgg tctatggtcc ttcaatcctc
    11161 atcaagaaag aattgaggct tcgtctaccc gacatggcaa aaaagtctat ttaagaaagt
    11221 ttaataatct tgaacaggct attgatgcat attatactac gctttcaact ggcccatttg
    11281 ctgattttag agctgagcgt cttaaaacca acgatccttt tgttcttatt aattatttaa
    11341 tcgattattc agaaaggaga gaagcctatg ttgaggaaat taaacaagtt attactggta
    11401 ataatttagt aaaatacgac agttaccgta ttgcacccaa atatattgca aaagattaag
    11461 ggttttcctt ttcttcaatc caacttataa ttttgctgtt attaggttta actattttga
    11521 agttacccca taatttatca gttacttctt tcaatccctt ttaaataaag gcacacaaga
    11581 ttttgccaag tggaaaagca cattttttaa aaaaatgggg taactttttg taggagtaaa
    11641 agaaaaacat cctc
//
LOCUS       DASCQP010000170         7323 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000675042, whole genome shotgun sequence.
ACCESSION   DASCQP010000170 DASCQP010000000
VERSION     DASCQP010000170.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 7323)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7323)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7323
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000675042"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1323)
                     /locus_tag="QF480_02880"
     CDS             complement(<1..1323)
                     /locus_tag="QF480_02880"
                     /inference="COORDINATES: protein motif:HMM:NF012492.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HJN05539.1"
                     /translation="MQRIFENNITYLKGVGPKKAEILRKELGIVVFDDLLNYFPFRYV
                     DKSKIYKVTDVVSDNTYFQLVGHVTNMIKVGDKRARYITATFTDESGSIGLVWFRGLQ
                     WVANRFKPSQKYIIFGKPSIFKNRFNFVHPEIEEYNSESFKVSGQRLEGIYSSTEKLK
                     NTGLGSRGISKLIKELLNQCSSKIEETLPDYIIAKFELLDRKKSMVNIHFPIDSEIVT
                     SARERLKFEELLFLQLQLLLQKNSLSRKINGQVFEIVGSSFNEFYNHNLPFALTGAQK
                     KVIKEIRADMRDGYQMNRLLQGDVGSGKTLVALMCMLISMDNGCQSCIMAPTEILAQQ
                     HYNSIRRLLINMDVQVELLTGSTKKKKRESIHQSLIDGNLHLLIGTHAVIEDTVQFKN
                     LGFVVIDEQHRFGVAQRAKLWRKNTIPPHMLVMTATPIPRTLAMTVYGN"
     gene            complement(1479..2327)
                     /gene="gldN"
                     /locus_tag="QF480_02885"
     CDS             complement(1479..2327)
                     /gene="gldN"
                     /locus_tag="QF480_02885"
                     /inference="COORDINATES: protein motif:HMM:TIGR03523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gliding motility protein GldN"
                     /protein_id="HJN05540.1"
                     /translation="MKRLCIAFITFSILLSFSAVSQIINEAPVDGLFPDETWSVNKKP
                     IPYPSIRRADVMWSKRIWREIDFRQKFNQKFYYPIDSQVSWKSFIMIVLDALKEGGQM
                     TAYDISNTDELLVPITYNEIVGRQIDTIHQISRRPYPPYEEYDTTIYTDFDPTKVMRL
                     RVKEDWYFDKQRSQMMVRIIALCPVLIVERDGQEQTSPMFWISYAESRDVFAQALVFN
                     EFNSAMKLTYDELFWKRLFDSYIYKEQNVYDRRINAYATGIDALLEPERVKNEMFRFE
                     EDLWQS"
     gene            complement(2347..3999)
                     /gene="gldM"
                     /locus_tag="QF480_02890"
     CDS             complement(2347..3999)
                     /gene="gldM"
                     /locus_tag="QF480_02890"
                     /inference="COORDINATES: protein motif:HMM:TIGR03517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gliding motility protein GldM"
                     /protein_id="HJN05541.1"
                     /translation="MAGYKETPRQKMIAMMYLVLTALLALNVSKEILDAFLVVNKSME
                     STNESLSAKIRETYTKFENQYNMNQNKVGPYWERARNVRTEATSLIKYLDFLKYKLVQ
                     VNERRDSLEIIKRYYVDTVIHGVRKKVLDLPSVPTKDKFNETTFYLIRENQNGEAYKL
                     SQRMQVYRDTVLNVMGLPYNSTKVGLITNMEGYSYANSGGVPQDWELHNFYHTILAAD
                     ITILNKIIAEVRSAEFNALNYLYASVSEKDFKFDNVEARVIPKSTYVFKGQKYEADVL
                     VAAYDSKTQVNSKVLRGATSITDQNIGRAQTIEGEEGKITLDFATNQEGLQKFAGIIE
                     MRDPETDEIVKYPYEGQYYVAPPSLTVAPLKMNVFYIGVDNPVSISAAGLSREQINPV
                     IDMGVLKANGNEWTVRIDKKPTGQSLATISATAEVDGQRLSLGQSEFRVKRVPDPSAE
                     IAGMTDGQIDKNVFLASSAIIPNMKDFEFDLYFVVTSYTFATIMNGDWVQKNVKGNIF
                     TDEVNAIIRNGKRKQKFFFEKIQAQGPDGTLRSLNPINLELK"
     gene            complement(4049..5050)
                     /gene="gldL"
                     /locus_tag="QF480_02895"
     CDS             complement(4049..5050)
                     /gene="gldL"
                     /locus_tag="QF480_02895"
                     /inference="COORDINATES: protein motif:HMM:TIGR03513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gliding motility protein GldL"
                     /protein_id="HJN05542.1"
                     /translation="MGLFSFTKTRFYRNFMAKVYGLGAAVVLIGALFKINHYPYADIM
                     LIVGLGTEALIFFFSAWEPPHVEPDWSLVHPELAGMYHGAGDRELKKRKSPTEVLDEM
                     LEQAQIDQEAIEKLGSGMAQLSDNALKLNNVTDAAVVSEEFYTNLKAASGTASELSYA
                     FGKEVEATNQYSENMQKVTEGAGSLANAYEHAADTMKTDINTTEVFTDTVKAATDSAQ
                     SLADSYEKSAEILSNSVSALDFTAVEGDAYNEQLRKIAENLSALNAIYEIQLQGSNKT
                     VESSEQLQVTMNEFLAKLEVSAASTAEFSGQMETLTERMGSLNKVYGNMLTAMNAND"
     gene            complement(5094..6464)
                     /locus_tag="QF480_02900"
     CDS             complement(5094..6464)
                     /locus_tag="QF480_02900"
                     /inference="COORDINATES: protein motif:HMM:NF015722.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SUMF1/EgtB/PvdO family nonheme iron enzyme"
                     /protein_id="HJN05543.1"
                     /translation="MKRLFLYTLVVMIISSCSNSGNGELVGTRTKSKPFYQPDPYGMV
                     FVPMGSYTMGAGDEDLTHSHMIQPKTISVSAFFMDETEITNDKYRQFVNWVRDSIART
                     ILGDVNPEEYLIEENSKTGEVYDPPYLNWKTDIDWNSDDQDVRDALDEMYLPEHERFF
                     RRKEIDTRKLMYEYYWVDLHAAAKKDFSEDADYRNAGLANRPQGLRDRSVYVRKETIA
                     VYPDTLSWIHDYTYSFNDPLTQKYFWHPAYDHYPVVGVNWKQARAFCVWRTEFLNAHL
                     RSKKGGVDLAEFRLPTEAEWEWASRGGYTLNPYPWGGPYTRNEKGCFLANFKPLRGNY
                     IADGGIRTVIAAHYPPNDWGLYDMSGNVAEWTNSAFDPASYNFTWDMNPNYTYNAKED
                     DPPVMKRKVIRGGSWKDIAYFLQVTTRTFEYQDTAKSYIGFRCVQPYLGRNKGDNPNK
                     ASRIYN"
     gene            complement(6581..>7323)
                     /locus_tag="QF480_02905"
     CDS             complement(6581..>7323)
                     /locus_tag="QF480_02905"
                     /inference="COORDINATES: protein motif:HMM:TIGR03519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PorP/SprF family type IX secretion system
                     membrane protein"
                     /protein_id="HJN05544.1"
                     /translation="EDYLITVDSPIKILHGGLGGAIIQDKATYLWNDVSLLLSYSFHT
                     DLSIGTIGIGIGGVLKNRNIDGSKFRPVDPSDDDLLKAEQGDMRFDANIGIFFKSINN
                     YFIGLSFTNLLQSKFKKLDPSGEGLISTDRTLYLSGGYNYIFPSDPRFEIQPSILIQS
                     DFISTQYNISTTVNYNSRFWAGLNYRVQESVGIMIGVRYKDFRLGYAYDVNTKRLGVP
                     GSHEISLNYCFRIKTDRSKTSYKNTRYL"
BASE COUNT         2228 a         1457 c         1163 g         2475 t
ORIGIN      
        1 attaccataa acggtcatgg caagtgttcg tggaataggc gttgctgtca taacaagcat
       61 atgtggaggg atagtatttt ttcgccacaa tttagcgcgt tgagccacgc caaaacgatg
      121 ttgctcatca attaccacaa acccaagatt tttaaactga acagtgtctt caattacggc
      181 atgtgttcca attaataaat gtagattacc atctattaaa ctttgatgta tagattctcg
      241 ttttttcttt tttgtagaac cagtaagtaa ctcaacttgc acatccatat taataagcaa
      301 cctcctaata ctgttataat gctgctgtgc caaaatctca gttggggcca taatacacga
      361 ctgacaccca ttatccattg atattaacat gcacatcaat gcaacaagag ttttcccact
      421 accaacatca ccctgaagaa gtcgattcat ctgataacca tctcgcatat ctgcccttat
      481 ttcctttatt accttttttt gtgcaccggt taaagcgaaa gggagattgt gattataaaa
      541 ctcattaaag ctgcttccaa ctatttcaaa tacttgtcca ttaatttttc tgcttagaga
      601 gtttttttgc agaagtagtt gcaactgaag aaacaataac tcttcaaatt ttagacgctc
      661 tctggcactt gtaacaattt ctgagtcaat ggggaaatga atatttacca ttgatttttt
      721 tctgtcgaga agttcaaatt ttgcaataat ataatcagga agagtttctt caattttgct
      781 tgaacattga tttagcaatt ccttgataag cttactaatt cctctacttc ccagtccagt
      841 attttttaat ttctccgtgg aactatagat gccttcaagt cgctgtccac ttactttaaa
      901 agactcacta ttatattctt caatttcagg atgaacaaaa ttaaaacggt tcttgaatat
      961 agaaggcttc ccaaagatga tatatttttg cgaaggttta aacctgtttg ccacccattg
     1021 taggccacga aaccatacta aacctatact tcctgattca tcagtaaacg tagctgtaat
     1081 atatcttgct cgtttatctc caacctttat catgttggtt acatgtccta ctaattggaa
     1141 ataagtatta tcggaaacta catcggttac cttgtagatt ttactcttgt ccacataacg
     1201 aaaagggaaa taattcaata aatcatcaaa aacaacaatt cctaattcct ttctcagaat
     1261 ctcagccttt ttagggccaa ctcctttaag ataagttatg ttgttttcaa atattctttg
     1321 catagttgat attgtgtaga gatgattctc cgcctcaagc ggatcagcgt ggaaagaagt
     1381 aacctagaaa accttctttc acccaacaaa tttaatccta tttatataaa caaaaaaacc
     1441 tcccatttct gagaggttca ttgtattcta aaggatgatt aagattgcca aagatcttct
     1501 tcaaacctga acatctcatt tttaaccctt tctggctcta acaaagcatc gataccggtg
     1561 gcatatgcat ttatacgtct gtcataaaca ttttgttctt tatagatata actatcaaac
     1621 aatcgtttcc agaacagctc atcgtaagta agtttcattg ctgagttgaa ctcgttaaat
     1681 acaagcgcct gagcaaatac gtctcgagat tcagcatatg aaatccagaa cataggtgat
     1741 gtttgttcct gtccatctcg ttccacaata agaactgggc ataaagcgat aatacgaacc
     1801 atcatctggc tacgttgttt atcaaagtac cagtcctctt taacacgtaa cctcatcact
     1861 ttagttggat cgaagtctgt ataaatagtt gtgtcatatt cttcatacgg aggataagga
     1921 cgtcgcgaaa tttgatgtat ggtatcaatc tgtctaccta caatttcgtt atatgttatt
     1981 ggaacaagaa gctcatctgt atttgaaata tcataagctg tcatctgacc accctcttta
     2041 agggcatcaa gaacaatcat aataaatgac ttccagctta cttgagaatc aattgggtaa
     2101 tagaatttct gattaaactt ttgtcggaag tctatttcac gccatattct ttttgaccac
     2161 atcacatctg ccctacgaat tgaagggtat ggaataggtt ttttatttac gctccaagtt
     2221 tcatcaggaa ataatccgtc aacaggtgct tcattaatta tttgtgatac agcactaaat
     2281 gatagcagta tcgaaaaagt aataaaagcg atgcacaatc ttttcatcct aaaatatttt
     2341 taaattttac ttaagctcta agttaatagg gttaaggctt ctgagtgttc cgtcaggacc
     2401 ttgcgcctga atcttttcaa agaaaaactt ctgttttctt tttccattac gtataatagc
     2461 atttacctca tcggtaaata tgttcccttt aacattcttt tgaacccagt cgccattcat
     2521 aattgtggca aatgtgtaag aagtaaccac aaaataaaga tcaaactcaa agtctttcat
     2581 gttagggatt attgcacttg atgccaaaaa aacattttta tcaatttgtc cgtcagtcat
     2641 tccagcaatc tctgcacttg ggtcaggtac acgttttacc ctgaattctg attggccaag
     2701 agataatcgt tgaccatcaa cttcggctgt tgcgctaatt gtagccaggc tttgaccagt
     2761 aggtttttta tcaattctta ccgtccactc atttccattt gctttaagca cacccatatc
     2821 aattactgga ttaatctgct ctctagataa tccagccgct gaaatggaaa cagggttatc
     2881 aacaccaata taaaatacat tcattttaag tggtgcaacg gttaaagaag gtggcgcaac
     2941 ataatattga ccctcatatg gatattttac tatctcatca gtttccggat ccctcatttc
     3001 tataataccg gcaaattttt gtaatccttc ctgattagtt gcaaaatcga gagtaatctt
     3061 tccctcttca ccttctatcg tttgcgctct tccaatattt tggtcagtaa ttgaagttgc
     3121 tccacgaaga actttactat taacttgtgt cttagaatca taagcagcaa ctagtacatc
     3181 tgcttcatac ttttgtcctt taaatacata tgtgcttttt ggtattactc ttgcttcaac
     3241 gttatcaaat ttaaagtcct tttcactcac tgaggcgtat aaataattaa gcgcattaaa
     3301 ctctgcagaa cggacttcag caataatttt attaagaata gtaatgtccg cagcaagaat
     3361 tgtatgatag aagttgtgta gttcccaatc ctgaggtact cctccggaat ttgcgtacga
     3421 atatccttcc atatttgtta ttagccctac tttagtagag ttataaggta agcccattac
     3481 gttaagtaca gtatcacgat aaacttgcat tctttgggat aatttatatg cttcaccgtt
     3541 ttgattctca cgtatcaaat agaaagttgt ttcattaaac ttatcctttg taggaacgct
     3601 tggaagatca agtacctttt tccgaactcc atgtattaca gtatcaacat agtagcgttt
     3661 tattatttct aatgaatccc ttctctcatt aacctgaaca agcttatact taaggaaatc
     3721 gagatattta ataaggcttg tagcttctgt tcgaacattt cttgctcttt cccaataagg
     3781 tcctacctta ttttgattca tattgtattg attctcaaac ttagtataag tctcacgaat
     3841 tttagcgcta aggctctcgt ttgtactttc cattgatttg ttaactacca agaaagcatc
     3901 cagaatctct ttagaaacat taagtgcaag gagtgctgtg agtacgaggt acatcatagc
     3961 aatcattttt tgccgtgggg tttctttata tccagccatt ttttatctat taattatggt
     4021 tttagtaatt tttggtacat gctaaaattt aatcattagc attcatggct gttagcatat
     4081 taccatatac tttattaagt gaacccattc gttctgtaag tgtttccatc tgtccagaga
     4141 attcggcagt agatgccgct gaaacttcta gtttagcaag gaattcattc attgtaactt
     4201 gtaattgctc agatgattca acagttttat tactaccttg taactgaatc tcgtaaattg
     4261 catttaaagc tgataagttt tcagctatct ttcttagttg ctcgttatat gcatcacctt
     4321 ctacagcagt aaagtctaat gctgatactg aattggaaag aatttcagcc gatttttcat
     4381 aactatctgc aaggctttgc gcagaatcgg tagcagcttt aacagtatct gtaaacactt
     4441 ctgtagtatt tatatctgtt ttcattgtat cagcagcatg ctcgtatgca ttggctagtg
     4501 aaccagcacc ttcagttact ttctgcatat tttcagaata ttgattagtg gcttctactt
     4561 ctttaccaaa agcataactt aattcacttg ccgtacctga ggcagccttt aaatttgtgt
     4621 aaaactcctc tgaaaccaca gccgcatcgg taacattatt taatttaagc gcattgtcag
     4681 aaagttgtgc cattccacta cctaactttt caattgcttc ctgatcaatc tgagcttgtt
     4741 caagcatttc atcaagtact tcagtaggtg attttctctt tttcaattct ctatcccctg
     4801 ctccatgata cattcctgct aattcagggt gtaccaaact ccagtcaggt tcaacgtgtg
     4861 gtggctccca tgcggaaaag aagaaaataa gtgcttcagt accaagtccc actataagca
     4921 taatatctgc gtaaggataa tggttaattt tgaataatgc accaataaga acaactgctg
     4981 caccaaggcc atatactttg gccatgaaat ttctgtaaaa acgtgttttt gtaaaactaa
     5041 ataagcccat gatttatttt tattatttta attttggttg tgttatttca atattaatta
     5101 tagattcgag atgctttgtt tggattatca cctttattac gtccgagata tggctggaca
     5161 catctaaatc caatatatga tttagctgta tcttgatact caaatgtccg agttgtaacc
     5221 tgaaggaaat aagcgatatc tttccatgaa ccaccacgaa taacctttct tttcataacc
     5281 ggaggatcat cttctttagc attgtatgta taattaggat tcatatccca agtaaagtta
     5341 taactagcag gatcgaaagc actattagtc cattctgcta cattacctga catgtcatac
     5401 aaaccccaat cgttaggtgg ataatgagca gcaataactg tacgtattcc tccatcagca
     5461 atataattac ccctaagtgg cttaaagtta gcaagaaaac atcctttttc atttcttgta
     5521 tatggacctc cccaagggta tggattaagt gtataaccac cgcgtgaagc ccattcccat
     5581 tcagcttcag tcgggagacg gaactctgca agatcaacac cacctttttt acttcttaaa
     5641 tgtgcattaa ggaactctgt tctccaaaca caaaaagcac gtgcttgctt ccagttaact
     5701 cccacaacag gataatgatc gtatgcagga tgccagaaat atttttgagt taacggatcg
     5761 ttgaaggagt atgtataatc atgtatccaa gacagtgtgt cgggataaac ggcgatggtt
     5821 tctttacgta cataaaccga acgatctctt aagccctgag gacggttagc caatccagca
     5881 tttctgtaat cagcatcttc agagaagtct ttctttgcag cagcatgcaa atcaacccag
     5941 taatattcat acattaattt acgagtatct atttccttac gtcggaaaaa acgttcatgc
     6001 tcaggcaggt acatttcatc gagagcatcc cttacgtcct gatcatcact attccaatca
     6061 atatccgttt tccagttaag ataaggagga tcgtaaactt cacctgtttt agagttttct
     6121 tctatcaaat actcttcagg atttacatct cctaatatag tacgtgctat tgaatcgcga
     6181 acccagttaa caaactgccg atacttatca ttagtaattt ctgtttcatc cataaaaaat
     6241 gctgaaactg aaattgtttt tggctgaatc atatggctat gtgtcagatc ttcatcgccg
     6301 gctcccatgg tgtaacttcc catcggaacg aataccatcc cgtaaggatc aggctggtaa
     6361 aatggttttg attttgttct ggttccaacc aattcgccgt ttcctgaatt gctgcaacta
     6421 gaaattatca ttacaaccaa tgtgtataaa aacaatcttt tcatcattaa aattttgttt
     6481 attgcgattt aatacttttt cctttacaat ttaagcgccc aaaaataata aaatatgtaa
     6541 acaatgtgca acttagaaat aatttttcga aataaaatta ttataagtat cttgtattct
     6601 tataacttgt tttagaacga tctgttttga ttctaaaaca ataattcagg ctaatttcat
     6661 gactaccagg aacgcctaat cgtttagtgt tcacatcgta agcatatcct agcctaaagt
     6721 ctttatatct tactcctatc attatgccca cagattcctg aacgcgataa ttcaatcctg
     6781 cccaaaatcg gctattgtaa ttaacggtgg ttgaaatatt atattgtgtt gatataaaat
     6841 cactttgaat taatatagaa ggttgaattt caaatcgtgg atcgctaggg aaaatataat
     6901 tgtatcctcc tgaaagatat agagttctgt cagtagaaat taatccctca cctgagggat
     6961 caagtttctt aaatttgctt tgaagcaaat ttgtaaaaga aagcccaata aagtagttat
     7021 ttattgattt gaaaaatatt ccaatgtttg catcaaatcg catatctcct tgctcagctt
     7081 tcaataaatc atcatcacta ggatcaaccg gtcggaattt tgaaccatca atgttacgat
     7141 tttttaatac tccaccaatg ccaataccaa tagttccaat tgaaagatca gtatgaaaag
     7201 aataagaaag taataaactt acatcattcc acaaataggt tgccttgtct tgaattatag
     7261 ctccaccaag tccaccgtgg agtattttaa ttggtgaatc tactgtaatt aaataatctt
     7321 cgg
//
LOCUS       DASCQP010000171         7266 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000677942, whole genome shotgun sequence.
ACCESSION   DASCQP010000171 DASCQP010000000
VERSION     DASCQP010000171.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 7266)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7266)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7266
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000677942"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1228)
                     /locus_tag="QF480_02910"
     CDS             complement(<1..1228)
                     /locus_tag="QF480_02910"
                     /inference="COORDINATES: protein motif:HMM:NF014628.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0019516 - lactate oxidation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lactate utilization protein B"
                     /protein_id="HJN05545.1"
                     /translation="MKNSIENNSFLAASEKVAFDEAHRDKIKFNIGKYNNAVDSGKKN
                     YSNLDIAKERAGFFKYKVINELDRYLIEFEANFIANGGKIIWAEDSEEALEEIIKIAR
                     NHNLKSAVKSKSMITEEIELNEALENCDIDVVETDLGEFIVQQAGQKPYHIVTPAMHM
                     SKEDVALLYNEKFNTPDDMSPEELTLYTRNYLREKFTDADLGITGANFLIADTGAIAL
                     TENEGNAMLSMSFPKVHIAIAGIEKIIPKLEDLDLYWPLLSTHGTGQAMTVYNSIISG
                     PCKNGEKDGPDNMYLILLDNGRVNLLKEEKQRQALLCIRCGACLNACPVYKNIGGHTY
                     NTTYSGPIGSVITPYLKSMKKYKHLSFASSLCGNCTTVCPVKIPLHELLLANRNHAVK
                     KGFHTFFEKRSIKLSSR"
     gene            complement(1239..1691)
                     /gene="rpiB"
                     /locus_tag="QF480_02915"
     CDS             complement(1239..1691)
                     /gene="rpiB"
                     /locus_tag="QF480_02915"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009317756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004751 - ribose-5-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009052 - pentose-phosphate shunt,
                     non-oxidative branch [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose 5-phosphate isomerase B"
                     /protein_id="HJN05546.1"
                     /translation="MIKSSTVLAIASDHGGFKMKEFIKRKLEDANYKIKDFGTFSDES
                     VDYPDFIHPLSKAINDGEYDIGIIICGSGNGAQITANKYNNVRAALCWNEEQAMLSRM
                     HNKANILSIPGRFVPFDQAWRIVEIFLSTDFEGGRHLQRVNKISKILK"
     gene            2259..3194
                     /gene="nadA"
                     /locus_tag="QF480_02920"
     CDS             2259..3194
                     /gene="nadA"
                     /locus_tag="QF480_02920"
                     /EC_number="2.5.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005639614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008987 - quinolinate synthetase A
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="quinolinate synthase NadA"
                     /protein_id="HJN05547.1"
                     /translation="MNYTTEILKLKNEKHALILAHFYQIPEIQELADFVGDSLGLAQK
                     AAEADVDLIVFAGVHFMAETAKMLNPDTLVILPDLEAGCSLAESCPEDKFKEFKNKHP
                     DHIVISYINTTAAIKTLTDIVCTSGNAVQIVESLPKNEKIIFAPDKNLGGYINRITGR
                     NMVLWNGTCEVHDILTTEAIIKLKEDNPDASIIAHPECNAPVLTLADYIGSTTGMIKF
                     TQKDNSNKYIVATESGIIHQMQKLSPGKEFLIVPSDSTCNCNDCPYMKLNTLKKLYLA
                     LKNETPAIIMNKDLMEKAKKPIIRMLDISKKLKII"
     gene            3199..3564
                     /locus_tag="QF480_02925"
     CDS             3199..3564
                     /locus_tag="QF480_02925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05548.1"
                     /translation="MKNRVLATCVIVLILLSSCSNLMLFTKETRDNLNKNHQEVNKVQ
                     FYNSDKIVLKRNLTKDETQVAKGVIVFENGQYFEEIIIPKRTKGVVTKKGSEYLRVAF
                     EEGDKRDLRSTCGNKILVQ"
     gene            3694..5220
                     /locus_tag="QF480_02930"
     CDS             3694..5220
                     /locus_tag="QF480_02930"
                     /inference="COORDINATES: protein motif:HMM:NF019284.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05549.1"
                     /translation="MNKICIISFNLFIFITFSSFSQEDVKINPNGYNIFYEGDSTKVS
                     EGTMRNGKPDGYWKNFYSSGALKSEGNRKDFDLDSIWKFYDEEGKILLEITYKAGKKN
                     GFRTTHQGAEIIKENFVNDVKHGNTLVFYANKKIKSRTPFVNGFEEGRAREYNIDGNI
                     IQLITYKKGYITDRERINRYDSDNMPHGSWKWFTDDELVVLIDGNYKHGLKHGYFKEY
                     DKDGNLISATKYIDGEKYEKAEELQKLDIRTDYYPNGKVKVVATYTKDGIPEGVRREY
                     NEQGQVEKSFIFRYGKIIGEGIFTDAGQKQGNWKEYYNDGSLKATGNYVNDLHDGIWK
                     YYYKNGQLEETGKYINGVPDSIWRWYYSDGKILRNEQFYNGLRDGMLTEYDKEGNVIT
                     QGDYLEDQKEGRWVYQVGDSKDEGDYSEGMRNGLWSSFYSEGNIRFEGKFIDDNPNGE
                     HKWYWDNGKIKQQGNYVMGRKNGDWKKFDESGFPIIIISYSGGKETKYDGISIESEIQ
                     "
     gene            5272..5919
                     /locus_tag="QF480_02935"
     CDS             5272..5919
                     /locus_tag="QF480_02935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05550.1"
                     /translation="MKKIILILATIAVVTISCENVTNTESKNTNADLIVADEIAILSV
                     ADFDKQAGNYIGKKIQLEGIVDHVCKHGGQKLFLVTEESDARIKVVPDEEIAAFNDEL
                     EGDKIELIGIVEEQRIDEDYVREWEEEIKSGTDLDDDKGEGSHLGGKIEKGGMDADTS
                     DEMKKIYNLRKMLKKSENGYLSFYSVLCTSYELDDDDDDGDDDDDDDDDDDHDHK"
     gene            5931..6485
                     /locus_tag="QF480_02940"
     CDS             5931..6485
                     /locus_tag="QF480_02940"
                     /inference="COORDINATES: protein motif:HMM:NF027675.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY-associated TM helix domain-containing
                     protein"
                     /protein_id="HJN05551.1"
                     /translation="MAFKWRKWNKAVHRDFGYFFFGMVVIYSLSGIAINHINDWNPNY
                     VVITEDIEVNPPATKPGKTELKKLLEPFNESDNYKNHYFPNDKIVKIFIKDGTVYINL
                     ISGKGLIEKTKRRALFREVNYLHYNPIKYWTWYSDIFAGALILIGITGILIPRGSKGI
                     TKRGAWMTVLGILIPIIYLFIYFY"
     gene            complement(6660..>7266)
                     /locus_tag="QF480_02945"
     CDS             complement(6660..>7266)
                     /locus_tag="QF480_02945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="coproporphyrinogen III oxidase"
                     /protein_id="HJN05552.1"
                     /translation="FFEYKIPHLSSYSLTVEPKTALHTLIKKNKIKNVVEKESVHHFE
                     ILLEEMQKNNFIHYEISNFALEGYYSKHNSIYWLGGNYIGVGPSAHSYNGKSRQWNVS
                     SIKSYCEQDNFVNIIEEKEVLNQDQLFNEYVLTSIRTSWGCDLEHINNLFGEKYSRHF
                     LKNVKMIINEKKIFRKGNVFTLTNKGKLYADGISSSLFYGI"
BASE COUNT         2590 a         1044 c         1297 g         2335 t
ORIGIN      
        1 ctcttgatga aagtttaatg cttctttttt caaaaaatgt atgaaagccc tttttaacag
       61 catgatttcg gttagcaagt aatagttcgt gaaggggtat ttttacagga cacactgttg
      121 tacagtttcc gcaaagtgat gaagcaaagc ttaggtgctt atactttttc atgcttttca
      181 aatatggcgt tattactgaa cctattggtc cgctgtaagt tgtgttgtat gtatgaccac
      241 caatattttt atatacagga catgcgttta aacaagcgcc acatctaata cataacaaag
      301 cttgacgttg tttttcctct ttaagcagat taaccctgcc attatccagt aatatcaaat
      361 acatattatc ggggccatct ttttctccat ttttgcacgg cccactaatt atcgaattat
      421 aaacagtcat cgcctggccg gttccatgag ttgataataa aggccaatac aaatcaaggt
      481 cttcaagttt aggtattatc ttttctattc cggcaatagc aatatgaact tttggaaacg
      541 acattgataa catggcatta ccttcatttt ctgttaatgc tatggctcct gtatcagcaa
      601 ttaagaaatt agctccggtg attcctaaat ccgcatctgt gaacttctcg cgtaaataat
      661 ttcgtgtata taaagtaagt tcttcaggcg acatatcatc aggcgtatta aacttttcgt
      721 tgtataataa tgccacgtct tctttagaca tatgcattgc cggcgtaaca atatgatacg
      781 gtttttgtcc tgcttgttgt acaataaatt caccaagatc tgtttctaca acatcaatat
      841 cacaattttc taaagcttca ttgagctcta tttcttcagt gatcattgat tttgatttta
      901 ccgcagattt aaggttatgg tttctggcta ttttgattat ttcttccaag gcttcttctg
      961 aatcttcagc ccatataatt ttaccaccat tagcaataaa attagcttca aattctatta
     1021 gatatcgatc gagttcatta ataactttgt atttgaaaaa tccagcacgt tctttggcga
     1081 tatcaaggtt actataattc tttttaccag agtcaacagc attattatat tttcctatat
     1141 taaattttat cttatcgcgg tgcgcctcat caaatgcaac tttttcagag gctgctagaa
     1201 atgaattatt ttcaatactg tttttcactt atcgattact atttcaaaat tttagaaatt
     1261 ttgtttaccc gttgcaaatg tctgccaccc tcaaaatcgg ttgataaaaa tatttcgaca
     1321 atcctccatg cttgatcaaa aggaacaaat cttccgggta tagacaatat atttgctttg
     1381 ttgtgcattc ttgataacat tgcctgttct tcgttccagc ataaagctgc tcgcacatta
     1441 ttatatttat tagctgtaat ttgagcacca ttaccgcttc cacatattat tattccgata
     1501 tcatattcac catcattaat cgcttttgat aatggatgaa taaagtcggg ataatctaca
     1561 ctttcatctg aaaaggttcc aaaatcctta attttataat tggcatcttc aagcttcctt
     1621 ttgataaatt ccttcatctt aaatccgcca tgatcagaag caatagctaa aaccgtgcta
     1681 ctttttatca ttgttaataa attagtgaac aaaagtagcc aaattttatt gttgaaaatt
     1741 aaactaactg aaaatcatta tatttaaaaa ttaaataaaa ttagataaac aatctaatga
     1801 tttaacaatc aaaaatttac tatttataac tagtttgttg ttaatatctg tttaattttg
     1861 ttggaaactt tgtaataaat aaggctttat taacattgct ttaaatcaat tattaatgtt
     1921 gtataaaata gatgtttttt accaaaagat attatcagat gttaacatga attattaaac
     1981 attagtaaat aaaattatca ctaatgtgta aatttattgt atgttaatta ctttgtcaaa
     2041 ttattaattg ttagtttatt ataaggttat attttgtaag taaattgtta gtaaaataca
     2101 tatattgtaa aatcaaaata atactgtatt aagtaatcaa taaagttaac cggatattat
     2161 taataagtat ttcttttatt aataaaatat ataaatgtag ataattgtta atattaatta
     2221 tctctttaac tttaaactat aattgcaaat tataagaagt gaattataca acagaaatat
     2281 taaaacttaa aaatgagaaa cacgcattaa ttcttgccca tttttatcaa atacccgaaa
     2341 tacaagaatt ggctgatttt gttggagaca gtcttggttt agcgcaaaaa gctgccgaag
     2401 ctgatgtaga tttgatagtt tttgcaggtg ttcattttat ggccgaaacg gcaaaaatgt
     2461 taaatcctga tacgctggtt attcttcctg atttagaagc aggttgttca ttagcagaat
     2521 catgccctga agataaattt aaagaattta aaaataagca tcctgaccac atagttattt
     2581 catacataaa taccacagca gcaattaaaa cacttacaga tattgtttgt acttcaggta
     2641 atgcagttca aattgttgaa tccttgccta aaaatgaaaa aatcattttc gcacctgata
     2701 aaaatttagg gggatatatt aacagaatta ctgggcggaa tatggtatta tggaatggta
     2761 cttgtgaggt tcatgacata ttaacaactg aagcaattat taaacttaaa gaagacaatc
     2821 ctgatgctag tataatagct catccagaat gtaatgctcc tgtactaacc ttggcagatt
     2881 acattggatc aacgacaggt atgataaaat ttacccaaaa ggataattcc aataaatata
     2941 ttgttgctac tgaatcaggt atcattcatc aaatgcaaaa actttcaccg ggaaaggaat
     3001 ttttaatagt tccatctgac tctacatgta attgtaatga ttgcccttat atgaaattga
     3061 acacattgaa aaaattatac ttagctttga aaaatgaaac acccgccata attatgaata
     3121 aagatttgat ggagaaggcg aaaaagccga taataagaat gcttgatatt tcaaaaaaac
     3181 ttaaaatcat ttgatgttat gaaaaataga gttttagcta catgtgtaat agtattaata
     3241 ctgttatcat catgttcaaa ccttatgttg tttactaaag agacgagaga caaccttaat
     3301 aaaaatcatc aggaagtgaa caaagtacag ttttataact cagataaaat agttttaaaa
     3361 aggaatttaa ccaaagacga aactcaagta gccaagggtg ttatagtttt tgaaaacggt
     3421 cagtattttg aagaaatcat tatacctaaa agaacaaaag gtgttgttac taaaaaggga
     3481 tccgagtatt taagagttgc ttttgaggaa ggtgataagc gagatttacg atcgacatgt
     3541 ggaaacaaaa ttttggttca gtaaaatatg atacaactgt ttatttcatt gttccaagca
     3601 gcagccatac tatgcttatg gtgaataagg aatatatttc aaattatgag aagaagcggc
     3661 gggttcttag aggcagaaac gtagccaggt aatatgaaca aaatctgcat aatatcattt
     3721 aatttattca tttttataac cttttcatca ttttcacaag aagatgtaaa gattaacccc
     3781 aatgggtata atattttcta tgagggggac agcacaaagg ttagcgaagg aaccatgcga
     3841 aatggaaaac ctgatggata ttggaaaaat ttctattcaa gcggagcatt aaaatcagaa
     3901 ggaaacagaa aagattttga tcttgatagc atttggaaat tttatgatga agaaggaaag
     3961 atacttctcg aaattactta taaagcagga aagaaaaacg gttttagaac tacacaccag
     4021 ggtgccgaaa ttattaaaga aaattttgtt aacgatgtaa aacacggtaa tacattagta
     4081 ttttacgcta ataagaaaat aaaatcaagg acacccttcg ttaacggatt tgaagaaggc
     4141 agggcgcgtg aatataatat tgatggtaat attattcaat taataactta taaaaaaggc
     4201 tacattactg atagagaaag aattaatcgt tatgattctg ataatatgcc acatggtagc
     4261 tggaagtggt ttactgatga tgaattggtt gtattaattg acggaaatta taagcatgga
     4321 ttaaaacatg gatattttaa agaatatgac aaagacggga atctaatttc agcaacaaaa
     4381 tatattgatg gtgaaaaata tgaaaaagcc gaagaacttc aaaaactaga tatccgaacc
     4441 gactattatc ccaacggaaa agttaaagtg gttgctactt atacaaaaga tggtattccg
     4501 gaaggggtaa ggagagaata taatgaacag ggacaggttg aaaaatcatt tattttcagg
     4561 tatggaaaaa taattggaga gggcatattt actgatgctg ggcaaaagca ggggaactgg
     4621 aaagagtatt ataatgatgg cagtttaaaa gcaacaggta attatgtaaa tgatttgcac
     4681 gatggtatat ggaaatatta ttacaaaaat ggccaacttg aggagacagg caagtatata
     4741 aatggcgtgc cagatagtat atggcgttgg tattatagtg atggaaaaat actgagaaat
     4801 gaacagttct ataatggtct aagagacgga atgttaacag aatacgataa agagggaaat
     4861 gtaattaccc aaggtgatta cttagaggac cagaaagagg ggcgctgggt ttatcaagtt
     4921 ggcgactcca aagacgaagg tgattatagt gaaggcatgc gcaatggatt atggagctcg
     4981 ttttattctg aaggtaatat taggtttgaa ggaaaattta tcgatgataa tccaaacggc
     5041 gaacataagt ggtattggga taatgggaaa attaagcagc agggaaatta tgttatggga
     5101 agaaaaaatg gagattggaa aaagtttgac gaaagtggtt tcccgataat tataatatca
     5161 tatagcggcg gaaaagaaac aaaatatgac ggaataagca tagaatctga aattcagtaa
     5221 gatgttcgga gataattatt tatctttgca aaaccaaata taattaaagc tatgaaaaag
     5281 attattttaa ttttagcgac aatcgccgta gtcacaattt cttgtgaaaa cgttacaaac
     5341 acagaatcga aaaacactaa tgcagattta atagtagctg atgaaatagc aattttaagc
     5401 gttgctgatt ttgataagca ggcaggaaat tacattggaa aaaagattca acttgaagga
     5461 atagtggatc atgtttgtaa acacggaggt caaaaattat ttctagtaac agaggaatca
     5521 gatgctcgta ttaaagttgt gccagatgaa gaaattgcag cctttaatga tgaactagag
     5581 ggagacaaaa tagaacttat aggtattgta gaagaacaga gaatcgatga agactatgtt
     5641 cgcgaatggg aagaggaaat aaaatcagga acagatttgg atgacgataa aggagagggc
     5701 tcacatttag ggggtaaaat agaaaaaggc ggcatggatg ctgacactag cgatgagatg
     5761 aagaaaattt acaatcttcg gaaaatgctt aaaaaatctg aaaacggata tttatcattt
     5821 tactctgtac tatgtacatc ttatgagtta gatgatgatg acgacgatgg tgatgatgac
     5881 gatgatgacg atgacgatga tgaccacgat cataaataag caatttctcg atggcattta
     5941 aatggcgtaa atggaacaag gctgttcatc gagattttgg atatttcttt tttggtatgg
     6001 tggtaatata ttccttatcg ggaatagcca taaaccacat caacgactgg aaccccaatt
     6061 atgtagtaat tacagaggat attgaggtaa accctccagc aacaaaaccc ggaaaaactg
     6121 aattaaaaaa gcttcttgaa ccgtttaacg aatccgataa ttataaaaac cattatttcc
     6181 caaatgataa aattgtaaaa attttcatta aagatggaac ggtttacata aaccttatta
     6241 gcggcaaggg gcttattgaa aaaaccaagc gaagagcatt gtttagggaa gttaattatc
     6301 tgcattacaa cccaattaaa tattggacct ggtattctga tatttttgct ggagcattaa
     6361 tactaattgg cataaccgga attttaatac ccagaggatc aaagggaata accaaacgtg
     6421 gggcatggat gactgtactg gggattttaa taccaataat atacttgttt atttattttt
     6481 attgagttat gaacgtttac tggatcacaa taatatttat tgtatggtat gctctgtcgc
     6541 tggtaatttc agaaacaatt gggaagcgaa gaaaaatagg cgtagaatgg tcttttttca
     6601 tcagcatgat attttctcct ataattggat acattgttgc taaaactagt ccaaaggcct
     6661 taaatgccgt aaaataacga agaagaaatt ccatccgcat aaagctttcc tttatttgtt
     6721 aatgtgaaga catttccttt gcggaaaatc tttttttcat ttataatcat cttcacattt
     6781 tttaaaaaat gacgactgta tttttcacca aataaattat taatatgttc aagatcacac
     6841 ccccaggatg tacgaattga tgttagtaca tattcattga ataattgatc ctgattaagc
     6901 acttcttttt cctcaataat atttacaaag ttatcttgtt cgcagtagct tttaatgctg
     6961 gacacattcc attgtcggga ttttccatta taagaatgag cggatggtcc aacaccaatg
     7021 taattacctc caagccaata aatactattg tgttttgaat aataaccctc aagcgcaaaa
     7081 tttgagattt cataatgaat aaaattgttt ttttgcattt cttcaagcag aatttcaaaa
     7141 tggtgaacac tctctttttc aacaacgttt ttaattttat tctttttgat tagagtgtgt
     7201 agggcggttt ttggctctac agttagtgaa tatgatgata ggtgtgggat cttatattcg
     7261 aaaaaa
//
LOCUS       DASCQP010000172         6054 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000694275, whole genome shotgun sequence.
ACCESSION   DASCQP010000172 DASCQP010000000
VERSION     DASCQP010000172.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 6054)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6054)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6054
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000694275"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(82..2814)
                     /locus_tag="QF480_02950"
     CDS             complement(82..2814)
                     /locus_tag="QF480_02950"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018338140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylcobalamin-dependent
                     ribonucleoside-diphosphate reductase"
                     /protein_id="HJN05553.1"
                     /translation="MENNLYLNFEDKTKEIAEKKEPQKKEGKNFYDKVLEERSRLETT
                     DAAIATIAKSKLQLNKTSDELPEQENAKKYFGNKEVLNAATKYFDGDELAAKVWMNKY
                     ALKDSEGKFYELTPADMHKRIAREIARIEKKYTNPMSESEILEVLKDFKYIIPAGSPM
                     AGIGNDNQISSLSNCFVIGNEGNSDSYGGILKIDQEQVQLMKRRGGVGHDLSHIRPQG
                     SPVKNTALTSTGVVPFMDRYSNSTREVAQDGRRGALMLSISIKHPDAEKFIDAKTEQG
                     RITGANVSVKLNDEFMNAVKNNTPYKQQYPIDSDNTKYEKEINPLELWNKIVRNAWAS
                     AEPGILFWDTVIRESIPDVYSDYGFATVSTNPCGEIPLCPYDSCRLLALNLYSYVEKA
                     FTKDAYFNGDKFTAHARIAQRLMDDIIDLEIEKIDLILSKINADPESKEIKLVERQLW
                     EKIREKSIQGRRTGIGITAEGDMLAALGLRYGSEDAITFSTEVHKLLAIEVYRASVDL
                     AEERGSFEIFDVTREIDNPFIKRIKKFAPHVYDKMLKVGRRNISMLTIAPTGSISICA
                     QTTSGIEPVFMVSYKRRRKVNPNDKNVVVSFVDELGDAWEEYNVFHSKFETWLKINGY
                     SIEEVKIKPEEELNKIIEQSPYYNATSTDIDWVNKVKMQGEIQKWVDHSISVTVNIPE
                     DATEELVSEIYLNAWESGCKGMTIYREGSRSGVLVSGTKKEEKDDFHDSRAPSRPKTL
                     EADIIRFQNNYEKWIAVIGKINDKPYEVFTGKSEDFYLPPYVESGWVTKKKKKGERTQ
                     YDFEFDDKQGYRIVLPALSRSFEQEFWNYAKLISGVLRHGMPLTYVMDLISNLTVPED
                     NINTWKNGVVRALKRYIPDGTIAVEKICPECREETVVYEDGCLICKSCGHTKCT"
     gene            complement(3149..>6054)
                     /locus_tag="QF480_02955"
     CDS             complement(3149..>6054)
                     /locus_tag="QF480_02955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05554.1"
                     /translation="SKVFLYFDGNHVKFEEQIRDGIAQVMFNQMMFGGTMGQQVKSST
                     FFSLPDWYKVGIISWLGKDWSVEYDNRVRDGILSGRYDKVNNLTGEDAVYAGHSLWRF
                     IAQRFGKTTVSNIIHMTSMSNSIDKGFMYVIGLSFRQLTQEWKEYYRKEYSQFAEIES
                     MPENVFNIKYKSDIRYGQPHISPYGDYLAYTTNEFGKYKIYLHNLSTGKKKKIFRRGV
                     SIGTKTDYSYPLLAWHPTGKLLAFIIEDKGMPWLYRYNIEDKEFTKQIIYNVQKVTDF
                     GFSDNGQLFVMSAVQNGQSDVFVYNIAASSFYNITNDIFSELNPRFINNSKQIVFSSN
                     RVNDTLGKKTELIVGVPDNFDLFVYDYSNRNPILKRITNTPIANEIMPESYGYNTISY
                     LSDESGIYNSYLAVLDSSVSSVDTAIHYRYFIHSKAVTNYSRDILNHNVSYKAGKKTS
                     VIFDNNLYKIFIEDTPSYSSIPELFPDTTLYMLQLQANYNKKQAGQLKKKLAMAKEDF
                     KEEVVEKTPQFKRFSMVYKNEKGEEVIGVMGEGAQISGNNQYNFNRDGLVTLKGDDKL
                     TIPKRLNYNVSYFINDLVSQIDFNYINYGYQPFTGGSGPIYLNPGFNIFFQIGMNDLM
                     EDHRLVGGVRLNLSLINNEYIFSYANLKKRLDKEVVFHRNTLEGSNGNTIVRVHSHEI
                     FYILKWPFNEALSIRGTGMYRNDMYVTLATDQINLEQPTVYNNWAGLKGELVFDNTRN
                     LGINLYKGSRYKVFAEYHQLIKSSSNNLIVLGFDFRDYQKIHRTFIWANRIAGSTSLG
                     SDRLIYYMGGVDNWLFPKFNMDTPIDYSQNYAFQTLATNMRGFNQNIRNGNSFVVINS
                     ELRFPIFQYFSKTPISSGFLRSFQIVGFGDIGTAWTGSNPYSPENSLFTKYIDSGPMH
                     ISVEVQKEPIVGGFGLGVRTTLMGYFIRGDISWGVDDYRVRQPVYYLSLSLDF"
BASE COUNT         1825 a         1199 c          925 g         2105 t
ORIGIN      
        1 atattatgac tttggatttc cacaaaataa aaaaagtcgc cttaaatggc gactttgatt
       61 aatcaatttg aaaatatctc tttaggtaca ttttgtatgt ccacatgatt tgcaaataag
      121 acagccatct tcatatacaa cagtttcttc gcggcattct ggacaaattt tttcaaccgc
      181 aatagttcca tctggtatat aacgttttag ggcacgcaca acaccattct tccaggtatt
      241 aatattatct tctggaacag tgaggttgga aattaaatcc atgacatatg taagtggcat
      301 accatgacgt agaaccccag aaataagctt tgcataattc caaaattctt gctcaaatga
      361 tctggataat gcagggagca caattcgata accttgtttg tcgtcaaact caaaatcata
      421 ttgtgtacgc tctccttttt tctttttctt tgttacccaa cccgattcaa catatggtgg
      481 caaataaaaa tcttctgact tgccggtaaa tacttcatac ggtttatcat ttatttttcc
      541 aattacggca atccatttct cataattatt ctgaaaacgg atgatgtctg cttctagtgt
      601 ttttggtcgt gaaggagctc tggaatcatg aaaatcatct ttctcctcct ttttagtacc
      661 gcttacaagt acaccggagc gtgagccctc acgataaatt gtcattcctt tgcacccgct
      721 ttcccaggca tttaaataaa tctcactaac aagttcttca gtagcgtctt caggaatgtt
      781 aacagttaca cttatcgaat gatctaccca tttttgtatt tcaccctgca tcttcacttt
      841 atttacccaa tcaatatctg ttgaagttgc attataataa ggagactgtt cgataatttt
      901 attcaattct tcttccggtt taattttaac ttcttctata ctataaccgt taattttaag
      961 ccaggtttca aattttgaat ggaaaacatt atattcttcc caagcatcac caagttcatc
     1021 tacaaagcta acaacaacgt ttttgtcatt tggatttacc ttcctgcggc gtttgtatga
     1081 aaccataaat accggttcga tacctgatgt tgtttgtgcg catatactta tgctaccagt
     1141 tggggcaatt gtgagcatag aaatattacg tctacctact ttcaacattt tgtcgtatac
     1201 gtgcggtgca aattttttaa ttcgttttat aaacggatta tctatttcgc gagtaacgtc
     1261 aaatatctca aagctgcctc gttcttctgc caaatcaaca gatgcgcgat aaacttcaat
     1321 agcaagtagc ttatgtactt ctgttgagaa agttattgca tcttcagatc cataccgtaa
     1381 acccaaagct gctagcatgt caccctctgc agtaatacca attcctgttc ttcttccctg
     1441 tatcgacttc tcccgaattt tttcccataa ttgtctttct acgagcttaa tttctttaga
     1501 ctctggatca gcatttattt ttgaaaggat taaatctatt ttttcaatct ctaaatcaat
     1561 aatatcatcc attaaacgct gtgcaattcg tgcgtgcgct gtaaatttat caccattaaa
     1621 ataagcatct tttgtaaatg ctttttcaac ataactatac agatttaacg ccagcagtct
     1681 acagctatca tatggacata atggaatttc cccacatggg ttagttgata ctgttgcaaa
     1741 accataatcg gaatatacat caggaattga ttctcttatt actgtatccc agaaaagtat
     1801 acccggctcc gctgaagccc atgcgttacg cacaatttta ttccaaagtt caaggggatt
     1861 gatttctttc tcatatttcg tattatcaga atcaatcgga tattgttgct tatatggagt
     1921 attattttta acagcattca taaactcatc attgagctta accgagacat ttgctcctgt
     1981 aattctccct tgttcagtct ttgcatcaat aaatttttct gcatccggat gttttatgct
     2041 aatgctgagc atcagtgctc cccttcggcc gtcttgtgct acttcgcggg tggaattcga
     2101 atatctgtcc atgaatggca ctacaccagt tgatgttaag gctgtatttt tcaccgggct
     2161 tccctgcgga cgaatatgtg acaaatcatg accaacacct cccctgcgtt tcattaactg
     2221 aacctgctcc tgatcaattt ttaatattcc accatacgaa tcagaatttc cttcgttccc
     2281 aataacaaag caattggaca aagatgatat ttggttatca ttaccaatac ctgccatagg
     2341 gcttcccgct ggtataatgt atttaaaatc tttgaggacc tccaaaattt cactttcaga
     2401 catcggattt gtatactttt tttcaatcct ggcaatctct cttgcaattc gtttatgcat
     2461 atctgcaggt gtgagttcgt aaaatttacc ctcactatcc tttagtgcat atttattcat
     2521 ccatactttt gcagcaagct catctccatc aaaatatttt gtagcagcat ttaatacttc
     2581 tttgttgcca aaatattttt tggcgttttc ttgctctggc aattcatctg aagttttatt
     2641 taattgtagc ttgctttttg ctatagttgc tatagctgcg tctgttgttt ccaatctcga
     2701 tctttcttct aaaactttgt cgtaaaaatt ctttccttct tttttttgtg gctctttctt
     2761 ctcagcaatt tcctttgttt tatcttcgaa atttaagtat aaattatttt ccattagtta
     2821 taccctgatt agtttgattt tggctatgtt actgtaaatg aatgctaaac aaaaagaaaa
     2881 ggcaatcctg taaaacgatg caatatacaa cacatactta cgaaaactag taatttttat
     2941 taacaaaagc atgtggaaaa aataaaaggc aggaaattaa gttgttataa aaaaaataac
     3001 gataaaaaaa atattcttct gttttggcat agttttttat gcataaaaat ctatcataaa
     3061 attcttaatc agcattcaaa aaaatattct tcggataaaa attctggtat tatctgaact
     3121 cttttagtgg aggcaatttt aacaaaaatt aaaaatctag actaagagaa aggtaataaa
     3181 ccggttggcg tactctgtaa tcgtccaccc cccatgatat atcacctcta ataaaataac
     3241 ccatcaaagt tgtacgtaca ccaaggccaa atcctccaac aataggttct ttttgtactt
     3301 cgacagatat gtgcatgggg ccactatcaa tatatttagt aaataatgaa ttttcaggtg
     3361 aatatggatt tgaaccagtc catgcagtgc ctatatcacc aaaaccaact atctgaaaac
     3421 ttcttaaaaa acctgaacta ataggtgttt tagaaaaata ctgaaatatc ggaaaacgaa
     3481 gttcagagtt tatcacaaca aaactattac cgttcctgat gttttgattg aatcccctca
     3541 tatttgtggc aagggtttgg aaggcataat tttgactgta atcgataggc gtgtccatat
     3601 taaactttgg aaatagccaa ttatcaacgc ctcccatata ataaatcaat ctatcacttc
     3661 ccaatgatgt gctgccggca attcggtttg cccaaataaa tgttctatga attttttgat
     3721 aatccctaaa atcaaaaccc aatacaataa ggttattgct gctacttttt attagctgat
     3781 gatattcagc aaaaacctta taacgtgaac ccttgtataa attaatgccc agatttcgtg
     3841 tattatcaaa aactagttct cccttaagtc cagcccagtt gttataaaca gtaggttgct
     3901 caagattaat ttgatctgta gcaagagtta catacatatc gttccggtac attccggttc
     3961 ccctaatgct taaagcttcg ttaaacggcc atttcaatat gtaaaaaatt tcgtgcgagt
     4021 gcacccttac tatggtgttg ccgttactgc cttccaaagt atttctatga aaaacaactt
     4081 ccttatctag cctctttttc agatttgcat aactaaagat gtattcatta ttaatcaggc
     4141 tgagatttag cctaactcca ccaacgagac gatgatcttc cataagatcg ttcattccta
     4201 tctgaaaaaa gatattaaat cccggattta agtatatggg cccgctaccg ccagtgaatg
     4261 gttggtaacc gtagttgatg tagttgaaat caatttggga tacaagatca ttaataaaat
     4321 aggatacgtt gtagttcaac cttttgggta tagttaattt atcgtctcct ttaagtgtaa
     4381 ccaaaccatc tctgttaaaa ttatattgat tgttgcctga aatttgagct ccttctccca
     4441 taacaccaat aacttcttct cctttttcat ttttataaac catactaaat cttttaaatt
     4501 gaggcgtttt ctcaacaacc tcttctttaa aatcttcttt cgccatggct aacttcttct
     4561 ttagctgtcc tgcctgtttc ttattataat tcgcctgtaa ttgcaacata tataatgttg
     4621 tatcaggaaa tagttcgggg attgaagagt atgaaggtgt atcttctatg aagattttat
     4681 acaaattatt gtcaaatata actgaagtct tttttcctgc tttgtagctt acattatgat
     4741 taagaatatc ccgtgagtag ttagtgactg ccttactatg aataaaataa cggtaatgaa
     4801 ttgcagtatc aactgaactc accgagctat cgagaacagc aagataggag ttataaattc
     4861 cactttcgtc actcaggtag cttattgtat tatagccata agattcgggc attatttcgt
     4921 ttgcaatagg ggtattggtg atgcgtttta aaattggatt tctatttgag taatcgtaaa
     4981 caaaaagatc gaaattatca ggaacaccaa ctattaattc tgttttcttt ccaagtgtgt
     5041 catttactcg atttgaacta aaaactatct gttttgaatt attaataaac cttggattaa
     5101 gttctgagaa aatatcatta gtaatattat agaacgagct ggcagcgatg ttataaacaa
     5161 atacatctga ttgaccattt tgtactgccg acattacaaa tagctgacca ttatctgaaa
     5221 aaccaaagtc ggttaccttt tgaacattgt aaataatttg ttttgtaaac tctttatctt
     5281 caatgttata cctatataac catggcatcc ctttatcttc aattatgaat gccaataatt
     5341 ttcctgttgg atgccatgca agtagtggat aagaatagtc ggttttagtg ccaatagata
     5401 cacctctcct aaatattttt ttctttttac ctgtggacag attgtgtaaa taaatcttgt
     5461 atttaccaaa ttcattagta gtgtaagcta aataatcacc atacggacta atatgaggtt
     5521 gtccgtaacg aatgtcggat ttgtatttta tattgaaaac attctctggc atactttcaa
     5581 tttctgcaaa ttgcgaatat tcctttcggt aatattcttt ccactcttga gttaactgtc
     5641 taaacgatag tccgataaca tacataaagc ctttgtcgat actgttgctc atactggtca
     5701 tatgaataat gttgctaact gttgttttgc caaaccgctg tgctataaaa cgccatagag
     5761 aatgcccggc ataaacagca tcttcaccag taaggttgtt aactttgtca tatctccctg
     5821 atagtattcc gtcacgaact cgattatcat attctacact ccagtcttta ccaagccagg
     5881 aaattatccc aaccttatac cagtcaggaa gtgagaaaaa agtagatgac tttacttgct
     5941 gccccattgt gcccccaaac atcatttggt taaacatcac ctgcgctatt ccatccctga
     6001 tttgctcctc aaatttaaca tggtttccgt caaaatataa aaacacttta gaac
//
LOCUS       DASCQP010000173         2449 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000695857, whole genome shotgun sequence.
ACCESSION   DASCQP010000173 DASCQP010000000
VERSION     DASCQP010000173.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2449)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2449)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2449
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000695857"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>2449
                     /locus_tag="QF480_02960"
     CDS             <1..>2449
                     /locus_tag="QF480_02960"
                     /inference="COORDINATES: protein motif:HMM:NF013069.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HJN05555.1"
                     /translation="IRVEEAIRGIAGIKEVNSTSSENISSTRITVTGEYDIDESLMEV
                     KNAVDGITSFPVDAERPIVFKQRSATFAMFMGLSGDADRLTLKKYADQIEYDLYNSGI
                     MSQITVSGYPALEISVEISEENLLRYNLSFDEVSRAIAQNNLDISGGQIRSDVEEIMI
                     RSRYRAVNPDEIEQIIIRANPDGSFLRIFDVGEVKMQFADVASQSLMNGKHSMSFAIN
                     KLPEEDLSKISKFCNDLAKEFNANHSDAQLYVTYDFLNMLKGRLSLLYKNGGIGLVLI
                     LLTLGVFLSLRLSFWVAFGIPASFLSMFILGAAYGITINMISLFGMILVIGILVDDGI
                     VIAENIYTHFQKGKSPKKAAVEGTMEVLPAVMTSVTTTIIAFSPLFFIEGRMEFLFEM
                     AFVVVFSLAFSLLEAFFVLPAHLGSSFVLRRSQRESIGKKIRDGLDKALSFMRQKIYG
                     KSLTFVLRWKYIFLFVPSLLFIITFGLFGGGQIKATFFPSIPFDQFTADITFKPGSGE
                     KQTLKYVQKIDDAIWEVNTELKEELNDTADFVNYTFVSTGSAFNGQEVGSHAGNVFVL
                     LRDLENTGTSSYEVVTRVQNKLGPLPEAEKVKIAGRNTFGTPVSISLLGKDLDELNAA
                     KDFLLRGMKQIKALNNITDVNPAGKREVQLKLKPKAYFLGFTQASLTNQVRQGFFGGQ
                     AQRLQHGKDELRVWVRYPKSDRINLGQLENMKIKTIAGEYPLSELAEYTIDRGPVSIK
                     HFNGEREVRVEADLLNPYDPVPPIIEKIRTDVLPEIESTYPGVTIEYQGQQRDSNETM
                     EQIINLFGIAFALMFLV"
BASE COUNT          771 a          418 c          518 g          742 t
ORIGIN      
        1 ctattagagt tgaagaagct attcgtggta ttgcagggat taaggaagtt aactccactt
       61 catcagaaaa tatttctagt accaggatta ccgtcactgg tgagtacgac attgacgaat
      121 cattgatgga agtaaaaaat gcagttgatg gaataacatc ttttcctgtt gatgccgagc
      181 gtcctattgt gttcaaacaa cgctcagcta cctttgcaat gttcatggga ttatcaggtg
      241 atgctgacag gcttaccctt aaaaaatatg ctgatcagat agaatatgat ttgtacaatt
      301 ctgggatcat gtcgcaaatt acagtaagtg gataccctgc actggaaatt tctgtggaga
      361 tttctgagga aaatctgcta cgatataatc ttagtttcga tgaagtttca agagcaatag
      421 cccaaaacaa tcttgatata tcgggaggtc aaatccgctc tgatgtggag gagattatga
      481 tcagatcacg ttaccgtgcc gttaatccgg atgagattga gcaaattatc attagagcca
      541 atccagatgg tagcttttta cgaatattcg atgtggggga agtaaaaatg cagtttgccg
      601 atgtggctag ccaatcgctg atgaatggaa aacattctat gtcctttgca attaataaac
      661 tacctgaaga agacctctca aaaatttcaa aattctgcaa cgatctcgcc aaggagttca
      721 atgctaatca cagcgatgca caactttatg ttacgtacga ttttttaaat atgctaaaag
      781 gtaggttgtc actactgtat aaaaatggtg gaattggact tgtacttata ttactcacac
      841 ttggcgtttt tttaagtcta cgcctttcgt tttgggttgc atttggtatt cctgcctcat
      901 ttttatcaat gtttattctg ggggcagcat atggaatcac aataaatatg atctctcttt
      961 ttgggatgat acttgtaatt ggaatactcg ttgatgacgg tattgtaatt gcagaaaata
     1021 tttatacaca ttttcagaaa ggaaagtcac caaaaaaggc tgctgtagaa ggaactatgg
     1081 aggtgttgcc ggccgtaatg acctctgtaa ctacaactat aatcgcgttt tctcctttat
     1141 tttttattga aggaagaatg gaatttttgt tcgaaatggc ttttgtggta gtattcagtt
     1201 tggccttttc acttcttgag gctttctttg ttttgccagc gcaccttggc agcagttttg
     1261 tgctaagaag aagccaaaga gaaagcattg gaaaaaaaat tcgtgatggt ttagacaaag
     1321 cgttaagctt catgcgacag aaaatttatg gtaaaagttt aacctttgtt ctaagatgga
     1381 aatatatttt tcttttcgtc ccgtcattat tgtttatcat aacattcgga ctatttggag
     1441 gaggacaaat aaaggctact tttttcccat ctataccctt cgatcaattt actgccgata
     1501 ttactttcaa gccaggttct ggtgaaaaac aaactctaaa gtatgtacaa aaaattgatg
     1561 acgcaatttg ggaagtaaat actgaactaa aggaagagtt aaatgacact gctgattttg
     1621 taaactacac atttgtttca accggatcgg catttaacgg acaagaagta ggatcacatg
     1681 caggtaatgt ttttgttcta ttacgggatc tggaaaatac aggaacgtcc agttatgagg
     1741 tcgttacaag ggttcaaaat aagctcggac cattaccaga agcagaaaaa gtaaaaattg
     1801 caggcagaaa tacatttggc actcccgttt caattagttt gctgggtaaa gatttggatg
     1861 aattaaatgc tgcaaaagat tttcttctca gaggtatgaa gcaaattaaa gccctcaata
     1921 atattaccga tgtaaatcct gcagggaaac gagaagtgca attgaaattg aaacccaaag
     1981 cttactttct gggatttact caagccagcc ttactaacca ggtacggcag ggattttttg
     2041 gagggcaggc tcaacgtttg cagcatggaa aagatgagtt aagggtttgg gtacgttacc
     2101 ccaaaagtga tcgaattaat ctgggacaac ttgaaaacat gaagatcaaa acaattgccg
     2161 gcgaatatcc tttaagtgaa ttggccgaat ataccatcga tcgtggacca gtaagtatca
     2221 agcattttaa tggggaaaga gaagtgcggg ttgaagcaga tttgctgaat ccttatgatc
     2281 ctgtgcctcc aattattgaa aaaatcagaa ccgatgttct tcctgaaatc gaaagtacat
     2341 atccaggagt aaccattgaa taccaagggc aacaacgcga ttctaacgaa accatggaac
     2401 agataataaa tttatttggc attgctttcg cactgatgtt ccttgtaat
//
LOCUS       DASCQP010000174         1987 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000700871, whole genome shotgun sequence.
ACCESSION   DASCQP010000174 DASCQP010000000
VERSION     DASCQP010000174.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1987)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1987)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1987
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000700871"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(52..939)
                     /locus_tag="QF480_02965"
     CDS             complement(52..939)
                     /locus_tag="QF480_02965"
                     /inference="COORDINATES: protein motif:HMM:NF013046.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05556.1"
                     /translation="MNILFNTKFLKHNEQSTEEGPYRIDQFPDKYKNTDADGEEFITL
                     VHTDNHKKQIYDACMNRHTAAEVELTPSSYEAAISAIGLTIKASEQGDFAVVRPPGHH
                     AGIERAAGFCLFNNIAIAAQKLVNEGKKVFILDIDGHHGDGTQSIFYNSDKVLYCSVH
                     QLYAYPFSGFPIEKGKDQGEGFTLNLPLLEGSGDMEFLAVLKKAINAAIKIKPDVVGV
                     SAGFDAYEKDRLLSLKYTKKAYYECGLQLRRAFPIVFGVLEGGYHNEVLDCVESFVEG
                     VNIGARPRNNLYDSDMSIG"
     gene            1105..1773
                     /locus_tag="QF480_02970"
     CDS             1105..1773
                     /locus_tag="QF480_02970"
                     /inference="COORDINATES: protein motif:HMM:NF027590.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4918 family protein"
                     /protein_id="HJN05557.1"
                     /translation="MNISERVIKYYSNLKIETNLPEGISVLNPYGSDEVMNVCWQFYN
                     KYYNDNDGRIFIVGINPGRLGAGITGIPFTDPVRLDNECGIKNNFAKRGEISSDFIYR
                     LITSMGGPAHFYRHFYIGSVSPLGFVSDGKNFNYYDSKELLVALKPFIISNLIKQIGL
                     GINVRKCYCLGQGKNYDYLKMLNIELKLFDEIIPLPHPRWVMQYRRKKLDQVISDVVR
                     KLIM"
BASE COUNT          633 a          322 c          349 g          683 t
ORIGIN      
        1 caaaatatcg aaatcttact atgtccataa ttaatgtgaa atagcagtct tctatccaat
       61 cgacatatcc gaatcataca agttattacg cggacgtgct cctatgttaa caccctcaac
      121 aaaagattca acacagtcaa gtacttcgtt gtgataacct ccttccagta ctccaaaaac
      181 aattgggaat gctctgcgga gttgcaatcc acattcatag taggctttct ttgtgtattt
      241 taatgaaagt aatctgtctt tttcatatgc atcaaaaccg gctgaaactc caactacatc
      301 aggcttgatt tttattgcag cgttaatagc ttttttcaag acagcaagaa attccatgtc
      361 tccactgcct tccaacaagg gtaaattcaa agtgaatcct tctccttggt cttttccttt
      421 ttcaattgga aatcctgaaa atggatatgc atacaactga tgaacggagc aataaagaac
      481 tttgtcgcta ttatagaaaa tactctgagt gccatcacca tgatggccat caatatctag
      541 tataaatact ttttttcctt cattaacaag tttttgagct gcaattgcga tattattaaa
      601 aaggcaaaat ccggctgctc gctctatgcc agcatggtgc ccgggtggtc taactactgc
      661 aaaatcacct tgttcactag ctttaatagt taatcctatt gccgaaattg ctgcctcata
      721 actactggga gttaattcaa cttctgcagc tgtgtgtctg ttcatacacg catcataaat
      781 ttgcttcttg tgattatcgg tatgcacaag tgtgataaat tcttcaccat cggcatctgt
      841 gtttttgtat ttatcgggaa attgatcaat ccgataagga ccttcctcag tgctttgttc
      901 attgtgtttt aagaactttg tattaaaaag tatattcatg tgtcaggctt gttgaataaa
      961 aaatcatgat gagctattgc ataattgtat taaattttaa ttgcaacaaa taaattgcaa
     1021 aaaaaggaaa taaaatcctg ataagtagaa atcggacctt tatatttatt aacattgtgt
     1081 cgtcgcaaat agctgcgctc aactatgaat atctcagaaa gagtaataaa atactatagt
     1141 aatcttaaaa ttgaaactaa tcttccggag ggaataagtg tattaaatcc atatggcagt
     1201 gatgaggtta tgaatgtctg ctggcagttt tacaataagt actataatga taacgacggt
     1261 aggatattta tagttggaat taacccgggg aggcttggtg ctggaataac cgggatacct
     1321 tttactgacc ccgtaaggct tgataatgaa tgtggtataa aaaataattt tgctaaacga
     1381 ggtgagatta gttctgattt catttatcgt ttaattactt caatgggagg tcctgctcat
     1441 ttttatagac atttttatat aggttcggtt agtcctttgg gttttgttag tgatggaaaa
     1501 aatttcaatt attatgattc aaaggagttg cttgtggcct tgaaaccttt tatcatttca
     1561 aatcttatca aacaaatagg tttgggtatt aatgtgcgaa aatgttattg tttggggcaa
     1621 ggcaaaaatt atgattattt gaaaatgcta aatattgaat taaaactttt tgatgaaata
     1681 atacccttgc ctcatcccag atgggttatg cagtacagac gaaaaaaact tgatcaggtt
     1741 atttctgatg tagttaggaa actaataatg taattaattt gggattggta cttgattttt
     1801 acaggttatt tcatgcagtc tttaaatgta gtatttcagt ttttgttaaa atatttaaat
     1861 caattataaa ttagactgtc gcgttatttt tattgtaaaa aacactctca aatacggtta
     1921 aagattgtat cttcgctcac caatttttat taaaaattaa aaactaatat ggcaaagatt
     1981 agtggtg
//
LOCUS       DASCQP010000175         1694 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000702523, whole genome shotgun sequence.
ACCESSION   DASCQP010000175 DASCQP010000000
VERSION     DASCQP010000175.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1694)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1694)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1694
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000702523"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(105..1547)
                     /locus_tag="QF480_02975"
     CDS             complement(105..1547)
                     /locus_tag="QF480_02975"
                     /inference="COORDINATES: protein motif:HMM:NF040521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C45 family autoproteolytic
                     acyltransferase/hydrolase"
                     /protein_id="HJN05558.1"
                     /translation="MYNRIILALLVLFSLKIYADNLPTGNSEKLTTEEQAWIAKANIH
                     KDAGWIIVHTEGTPMERGFQHGYILANEFKEAWRVASYMCVQTTGMDFSFFVNKAVEL
                     YGEKMPEYLVQEMTGIAAGLTKAGVPTTYNQVLGWNMYGELTESWWPLHANEYTDYYV
                     PKAKKDKCSAFVATGSATKGGKIVIGHETFGDFSLQQAYNIALEIIPDEGFGFIMQCA
                     PGFISSQEDFYINVAGIATVETTILGLTTYTTDGIPYFVRTRNAIQFGGNIDEFVEQM
                     NKGNNGGMNASWLIADINTNEIARFEQGLYYTSLKKKKDGYFYGCNVVWDPRIRNLEC
                     KGETGFNDPRMQTGARRIRWPQLLEPNLGSIDAQAGMTMLADTFDVYLNKEQPSCRTI
                     CAHYDIDPREFAPPVTAWAEPYTPAGSTDGKVTTAELAADLKFWGRIGRADGIEFDVD
                     SFLKSHPEWSWQKGYLKSRPSQPWVIIEAE"
BASE COUNT          501 a          368 c          294 g          531 t
ORIGIN      
        1 agccttactt caaatcggga acaactgtta aagaatatcc aggatatata actattcgtc
       61 catagccaat aatttcgaaa aatgttcgtg tcagtttttt atatctattc agcttcaatt
      121 attacccacg gttggcttgg cctactttta agataacctt tttgccagct ccattcagga
      181 tgagatttta agaacgaatc aacatcgaat tcgattccat cagcacgccc gatgcgaccc
      241 caaaacttta ggtcggccgc aagttcggct gttgttacct taccatctgt cgatcccgcc
      301 ggagtatagg gctctgccca tgctgttacg ggaggagcaa actctcgagg atcaatgtca
      361 taatgagcac aaattgtccg gcaggatggt tgctctttgt ttagatatac atcgaaagta
      421 tcggcaagca ttgtcatacc tgcttgggca tctattgaac caagatttgg ttctaataac
      481 tgaggccacc taattctacg tgctcctgtt tgcattcgtg gatcattaaa tccagtttct
      541 cccttacact ccaggtttcg tattcttgga tcccacacaa cattgcatcc gtaaaaatat
      601 ccatctttct ttttcttgag actcgtgtag taaagacctt gttcaaagcg agctatttcg
      661 ttagtattaa tatctgcaat aagccaactt gcattcatac cgccattgtt acctttgttc
      721 atctgctcaa caaattcatc aatgtttcca ccgaactgta tagcattgcg agtgcgaaca
      781 aagtaaggta taccgtcagt tgtgtacgtt gttaatccaa gaattgttgt ttcaacagtt
      841 gcaatacctg caacattgat ataaaaatct tcctgactcg aaataaaacc gggtgcacat
      901 tgcataataa aaccaaatcc ttcatccgga atgatttcaa gagctatgtt atatgcttgc
      961 tgcagtgaga aatcaccaaa tgtttcatga ccaataacta ttttgccacc tttagtcgcc
     1021 gagccagttg caacaaatgc gctacactta tcctttttcg cttttgggac ataataatct
     1081 gtgtattcat ttgcatgtaa aggccaccaa ctttcagtta attcaccata catattccat
     1141 ccgagtactt ggttatacgt agtcgggact ccggctttag tgaggccggc agctattccg
     1201 gtcatctcct gaactaaata ttccggcatt ttttcaccat ataattcaac tgctttatta
     1261 acaaaaaagg agaagtccat tcctgtagtt tgtacacaca tatatgatgc tacacgccat
     1321 gcttctttaa attcattagc aagaatatac ccatgctgaa atcccctttc catcggtgtg
     1381 ccttcagtat gaactataat ccaacctgca tctttatgaa tattggcttt agcaatccag
     1441 gcctgctctt ccgtagtgag cttttcggaa tttccagtag gtaagttatc tgcatatatt
     1501 ttaagagaaa atagaacgag caatgctaag ataattcgat tatacatagt tcaaaagttt
     1561 tagtgatagc gttaattatt atagctgact atatatctta aatagatagt tcagcaccaa
     1621 aaataataaa aattctataa agacaagcca catgctcaaa aagagttgaa aagattgctt
     1681 gagaatagca gtca
//
LOCUS       DASCQP010000176         2956 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000704226, whole genome shotgun sequence.
ACCESSION   DASCQP010000176 DASCQP010000000
VERSION     DASCQP010000176.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2956)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2956)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2956
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000704226"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(208..1923)
                     /locus_tag="QF480_02980"
     CDS             complement(208..1923)
                     /locus_tag="QF480_02980"
                     /inference="COORDINATES: protein motif:HMM:NF012935.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HJN05559.1"
                     /translation="MKIIKYDVCIIGSGAGAAPIAYELSKNGFNVIVIEKGPWFKTKD
                     LSKDEITSTRRNVYTPLLQDEQHVIESRNSDGDWESKSTYSTGISYWNGNMVGGSTNL
                     MSGYFHRMNPNDFKLLTTYGPIEGANITNWPIDYSEMEPYFDIVEKEIGISGRVVDHS
                     TQEPRSKNHFPYPPLVENIVSSWIDNASNELGYDAVPIPRAILSLPEKNRSSCYYSNY
                     CGSYGCSSDAKGSARVALLDKALITGKCTILPNSKVYKLETNGNGKIIRSWHYDDEGS
                     KQSIEADLFVVACQAVETSRLLLMSKNEDFPVGLANNSGLVGKNLLFSAGGVGSGIFD
                     YDNLKKSEAEQLKVPGLFVNRAIQHWYEIDDARLPDGQENEFPKKVKGGTVDFLFEHA
                     NGISKAIRNKWDEDGNLVYGSALKSKMKNYFLNQRKLNFEVFADWLPTDNCYVTLDDN
                     VVDKWDDPVAKIRIDNHPHDLEVGKYLSKKAEDLMEKMGANDIKSSINGSPPTNLMAG
                     GCRFGDDPKNSVLDRNCKAHEVDNLYVTDGSFMPTGGSVTYTWTIYANAFRVADIIIK
                     RLRNG"
     gene            complement(1926..2558)
                     /locus_tag="QF480_02985"
     CDS             complement(1926..2558)
                     /locus_tag="QF480_02985"
                     /inference="COORDINATES: protein motif:HMM:NF025004.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate 2-dehydrogenase subunit 3 family
                     protein"
                     /protein_id="HJN05560.1"
                     /translation="MAKENRKYKLKHIPDSIRDSQTWQLSRKKFINGVLLGGIAANFP
                     SISLLGKNINKTEKLSANQLSIIVSVQKILFPSDDNGPGAYDVMSDKYLLWVISDVRM
                     DPEEIEYIINGADWVDETAEENFLKSYNKLSQSEKETLIADISIEPWGKSWLGVILTF
                     IFEALLSDPQYAGNPEAIGWDWLKHNPGYPRPTKPLIYPEILATVSKNTN"
     gene            2571..>2956
                     /locus_tag="QF480_02990"
     CDS             2571..>2956
                     /locus_tag="QF480_02990"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF012387.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HJN05561.1"
                     /translation="MINPAPYENIVFLITMEKLIVLLSLITLLVSCKQNNPKVIIETN
                     LGEITLELYEKEAPLTSKNFIRYIDEKRYEGATFYRVVTPNNQPDSKIRIEVVQGGLY
                     EDDHPQALPPIAHENTKQTGIKHLDGV"
BASE COUNT          908 a          589 c          453 g         1006 t
ORIGIN      
        1 cataaacaac ggcaccgtcc tttgctatta atcttatacc tgtacatgct tgtgtggaat
       61 tcatgaaaac tccagctatt agcataaatc ctattaggat tgaaataatt tttccattac
      121 tgattttcat ttttacgtcg ttttaatgtg agtttataaa tttctttaaa ggattaattt
      181 gccaataaaa ttacaacaat ttgtaaccta tccatttctc aatctcttaa taataatatc
      241 cgcaacccta aatgcattgg catagattgt ccaggtatat gttacgctgc ctccagttgg
      301 cataaaacta ccatccgtaa cgtaaagatt atcaacttcg tgagctttgc aatttcggtc
      361 aagaacagaa ttttttggat catcaccaaa gcgacaacct ccggccatta aattagttgg
      421 aggagagcca ttaattgacg acttgatatc atttgctccc atcttttcca tgagatcttc
      481 agcttttttt gaaagatact ttcctacttc caaatcatga gggtgattgt caattcttat
      541 ttttgccaca ggatcgtccc atttgtcaac aacattatca tctaaggtta cataacagtt
      601 atccgttggc agccaatccg caaaaacctc aaaatttaac ttacgttgat ttaaaaaata
      661 attcttcatt tttgatttaa gtgctgaacc atataccaaa tttccatctt catcccactt
      721 gttcctaatg gctttactta tcccgtttgc atgttcaaat agaaagtcaa cagtacctcc
      781 ttttactttc tttgggaatt cattttcctg tccgtccggc aggcgagcat catcaatttc
      841 ataccaatgt tgaattgcac ggttgacaaa aagtcctggt acttttagtt gttctgcttc
      901 actttttttt agattatcat aatcgaaaat tcctgatcca acacctcctg ccgaaaaaag
      961 aaggtttttt ccaacaagcc cagaattgtt agccaatcca actggaaaat cttcattttt
     1021 gctcatcaat aacaatctgg aagtttcaac tgcctggcat gcgacaacaa ataaatctgc
     1081 ttcaatactt tgtttagaac cttcatcatc atagtgccat gatctgataa ttttaccatt
     1141 accatttgtc tccagtttat aaacctttga atttggcaga attgtacatt ttccagtgat
     1201 tagtgcttta tcaagcagcg ctactctggc acttcccttg gcatctgacg aacaaccata
     1261 acttccgcaa taattagaat aataacaact tgaacgattc ttttccggta aggataatat
     1321 tgctctagga attggaacag catcataacc gagttcattt gaagcattat caatccaact
     1381 ggaaacaatg ttttcaacta gcggcggata tggaaagtgg ttttttgatc tgggttcctg
     1441 tgttgagtga tcaacaacac gaccgcttat accaatttct ttttcaacta tatcaaagta
     1501 gggttccatc tcactataat caattggcca gttagtaata tttgcacctt caatgggccc
     1561 atatgttgta aggagtttaa aatcattagg attcatacga tgaaaatagc cactcattaa
     1621 gttcgttgaa cctcctacca tgtttccatt ccagtagctt attcctgttg agtaagtaga
     1681 ttttgattcc caatctccat cagaatttct gctttctatt acatgttgct catcttgcaa
     1741 aagtggtgta taaacatttc ttcgtgtact agtaatttca tcctttgaca gatccttagt
     1801 tttaaaccat ggcccttttt caataacaat tacattaaat ccgttttttg aaagttcata
     1861 agctatgggt gcagccccgg cgccactacc tataatacaa acatcatatt taataatttt
     1921 cattattaat tagtattttt tgaaaccgtt gctaatatct caggatatat taatggtttt
     1981 gttggtcttg gatatccggg attatgcttt agccagtccc acccaattgc ctcaggattt
     2041 ccagcatatt gaggatcact aagtaaagct tcaaaaataa aagtaagtat tacacccagc
     2101 caacttttgc cccaaggttc aattgatata tctgcaatta atgtttcttt ttcagattgt
     2161 gataatttgt tgtaactttt caaaaagttc tcttcagcag tttcatcaac ccaatcggct
     2221 ccgttaatta tatactctat ttcttcagga tccattctaa catcagatat tacccacagc
     2281 aaatacttgt cggacattac atcataagca ccaggaccat tatcatcaga tggaaagagt
     2341 attttttgta cagatactat aattgaaagc tgatttgcag aaagtttttc tgttttatta
     2401 atgtttttgc ccaataatga gattgaaggg aaattagcag ctatgccacc cagaagaaca
     2461 ccattaataa atttctttct tgaaagctgc caggtttgtg aatctctaat agaatccggt
     2521 atgtgtttta acttatattt ccgattttct ttggccatgc tagttagtcg ttgattaatc
     2581 cggcacctta cgaaaatatt gtatttttga ttaccatgga aaaactgatt gttcttttat
     2641 cattaattac attactcgtt tcttgtaaac aaaataatcc caaagttatt attgaaacta
     2701 acttaggaga aattacactt gaactttatg aaaaagaagc accactaaca tcgaaaaact
     2761 ttattagata tattgatgaa aaaaggtatg aaggggcaac tttctatagg gtagtaactc
     2821 ctaacaatca acccgatagc aagataagaa ttgaggtggt tcaaggcggg ttatatgaag
     2881 atgatcaccc tcaggcatta cccccaattg cacatgaaaa cacaaaacaa acaggaatta
     2941 agcatcttga tggtgt
//
LOCUS       DASCQP010000177         2206 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000706292, whole genome shotgun sequence.
ACCESSION   DASCQP010000177 DASCQP010000000
VERSION     DASCQP010000177.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2206)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2206)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2206
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000706292"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..346)
                     /locus_tag="QF480_02995"
     CDS             complement(<1..346)
                     /locus_tag="QF480_02995"
                     /inference="COORDINATES: protein motif:HMM:NF014813.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009404 - toxin metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-activating lysine-acyltransferase"
                     /protein_id="HJN05562.1"
                     /translation="MKDIINLFRLFDKYANFSDKELSNYLAPSIYYNQYKKHYHKEQL
                     IGFTNWALISNEVENKFMKSQPLHLIDWKSGNNIWHIETVCTMNLPEIIAWTKNNLAT
                     NYGINQTIKWARI"
     gene            complement(346..912)
                     /locus_tag="QF480_03000"
     CDS             complement(346..912)
                     /locus_tag="QF480_03000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05563.1"
                     /translation="MTRSLTSGVKTHLATNEIKPVHLITIGFGTPINITDCVHDLTSS
                     ISGSSVTYSSSSFLVNIPSYSEETDINKSSLTIALSGANQTYISIALAENIVNDAVTI
                     YRAFLDANNAIIADPFLLYKGTIETYAIQETNTDSVLSLNIVSHWADFEKRSGRKTNN
                     TSQQRFFSADKGMDFSSETVLDIKWGRA"
     gene            complement(863..1090)
                     /locus_tag="QF480_03005"
     CDS             complement(863..1090)
                     /locus_tag="QF480_03005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05564.1"
                     /translation="MTQYLVKYWINVDMLAEEVVDSEHINIDTNDLGKFRNPSKNAKY
                     KILDSIKVQRTSYEKYDKKLNIRSKDTSSNK"
     gene            complement(1195..1803)
                     /locus_tag="QF480_03010"
     CDS             complement(1195..1803)
                     /locus_tag="QF480_03010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05565.1"
                     /translation="MSGAFPISTSKFSTMGIQSIQPTLISKSISGKKLSRTIDAQRWA
                     FTISIITSTRATAYGELMAFIVKQRSGKENFTIIPPELEDARGNISGTVLVNGVHAVG
                     DTTIAVDDMTGSLKAGDFIKFAHDKIYMVVADVTADGSNEATTTIEPPLTTALADDSS
                     VTYDNVPFTVHLTNDMQEFGVVGVDKDGNHLYKFEFDVEETL"
     gene            complement(1803..>2206)
                     /locus_tag="QF480_03015"
     CDS             complement(1803..>2206)
                     /locus_tag="QF480_03015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05566.1"
                     /translation="STTIEVIVRKGVELAIEKLITREKAKQWAFEDAKTKSNLLSTGM
                     SLMGFQHGGAVSKGTPTLVGERGPEMFIPNTSGQITQNARGTGGGSVSVNFHISTIDS
                     RGFDEALVANRGTIASIINNAMNEKGSRGVV"
BASE COUNT          653 a          401 c          299 g          853 t
ORIGIN      
        1 ctattcttgc ccatttaatt gtttgattta ttccataatt agtggctaga ttatttttag
       61 tccaagcaat tatttcaggt aaattcatag tacacacagt ttcaatatgc catatattgt
      121 ttccactttt ccaatctatt aaatgtaatg gctgactttt cataaattta ttttctactt
      181 cattggatat taatgcccaa tttgtaaatc ctattaattg ttctttgtga tagtgttttt
      241 tatattgatt ataataaata ctaggtgcta aataattact taattcttta tcagaaaaat
      301 tagcatactt atcaaagagt ctaaataaat tgattatatc tttcattatg ctctacccca
      361 cttaatatct aaaacagttt cacttgaaaa gtccatgcct ttatctgcac taaagaatcg
      421 ttgttgggat gtattgtttg tttttcttcc tgatctcttt tcaaaatcag cccaatgaga
      481 aacaatattt aaacttaata ctgaatccgt attagtttct tgaatagcat acgtttcgat
      541 tgttccttta tataataaaa aaggatcagc aataatggca ttgttagcat ctaaaaatgc
      601 tcgataaata gtaacagcat catttactat attttctgct aaagcgattg aaatataggt
      661 ttgatttgca ccggataatg cgatggttaa actggattta ttaatatcag tttcttctga
      721 ataggatgga atattaacta aaaaactact tgatgaataa gtaacactag aacctgaaat
      781 acttgaagtg agatcgtgta cgcaatcggt aatatttatt ggtgtgccaa agccaatcgt
      841 aatcaaatga acaggtttaa tttcatttgt tgctagatgt gtctttactc ctgatgttaa
      901 gcttcttgtc atatttttcg taacttgttc gttgcacctt aatactatct aatattttat
      961 atttagcatt tttactagga tttctaaact ttcctaaatc attagtatca atgttaatgt
     1021 gttcgctatc tactacttct tcagccaaca tatcaacatt gatccaatac ttcacaagat
     1081 attgcgtcat ctaatatcta ttttcttttt ttctttttgt tgcctttttt cttcttcttc
     1141 ttgccttttt tcttcttctt tttctttggc atatatcctc ctttcgttat aaaattataa
     1201 agtttcttcc acatcaaatt caaatttgta taaatggttt ccgtctttat caactcctac
     1261 aactccgaat tcttgcatat cattggttag atgaactgta aaaggaacgt tgtcataagt
     1321 aaccgaacta tcatccgcta aagcagttgt gagaggtggc tctattgttg ttgttgcttc
     1381 atttgaacca tctgctgtaa catctgcaac caccatataa attttatcat gtgcaaattt
     1441 tataaaatct ccagctttta acgatcctgt catatcatca acagcaatcg ttgtatctcc
     1501 aactgcgtga acaccattaa ctaaaacagt tccactaata ttacctctag catcttctaa
     1561 ttctggagga ataatcgtaa agttttcttt tccgcttctt tgcttaacga taaaagccat
     1621 taactctccg taagcagttg ctctagttga tgtaataata gaaatagtaa atgcccatct
     1681 ttgagcatca atcgttcttg ataatttttt tccacttata gatttagaaa taagtgtggg
     1741 ttggatagat tgaataccca ttgttgaaaa tttagaagtt gatattggaa atgcaccact
     1801 cattatacga cacctcttga tcctttttca ttcatagcat tattaataat agaagcaatt
     1861 gttcctctat tggctactaa agcttcatca aaacctctgg agtctatggt tgatatatgg
     1921 aaattcacac taacactacc tccaccagtt cctctagcat tttgtgttat ttgccctgat
     1981 gtatttggaa taaacatctc tgggcctcgt tctcccacaa gagttggtgt gccttttgat
     2041 actgctcctc catgttgaaa acccattaaa ctcatgcctg tacttaataa attagatttt
     2101 gttttagcat cctcaaaagc ccattgtttt gctttttctc ttgtaattaa tttttcaata
     2161 gcaagttcaa caccttttct aacaataact tctatggtag tgctta
//
LOCUS       DASCQP010000178         2472 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000707275, whole genome shotgun sequence.
ACCESSION   DASCQP010000178 DASCQP010000000
VERSION     DASCQP010000178.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2472)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2472)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2472
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000707275"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..808)
                     /locus_tag="QF480_03020"
     CDS             complement(<1..808)
                     /locus_tag="QF480_03020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05567.1"
                     /translation="MKRKNTIILTISFIVLISLIWYFSSSSVETANTITVEVEKGTFV
                     IDVTTTGELEARSSENIKGPNPNALRNARIHRYMIEDIVPDGTVVDSGQWVATLDRSD
                     LQNKITDQELEVEKLETQFIKTQLDTTLTLRAARDELINLEFTLEEKQIVVDQSIYEP
                     PVTQRQVKIDLEKTQRALNQNIENYTIKHQKAEADMREVATNLMKARRELNEYNDLKK
                     EFIVMAPKPGMVNYKRDWNGKKQGVGAQVSMWDNVVATLPNLSAMNSRTYV"
     gene            complement(979..2388)
                     /gene="nhaD"
                     /locus_tag="QF480_03025"
     CDS             complement(979..2388)
                     /gene="nhaD"
                     /locus_tag="QF480_03025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005855241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter NhaD"
                     /protein_id="HJN05568.1"
                     /translation="MFILMIVVFVLGYTAIALEHPLKVDKAASALVLGMAMWVIFVFG
                     RTDILSMLNEAGQFLSQSWREYVHEAGIHNPTSGDMLNFITHHDVMHHLAEISTILFF
                     LLGAMTIVETVDQHQGFKIITDRIKTTNKVKLLWILSILTFFMSATLDNLTTTIVLIA
                     LLRKLIDDKKERWLFASMVVLAANAGGAWSPIGDVTTIMLWIGGQVTTLNIILMVILP
                     SLVTMIVPVVILSFTLKGDVTRPILAAHETKEFTTPFERNLLFYMGVGGLLFVPVFKT
                     VTHLPPYMGMLLSLGIIWITTEVMHRLKPDEDRRTLTVIGVLHKVDVPTIFFFMGILS
                     AVAAMQSAGHLTLLADWLNKNVGDIYVINLIIGVLSSIVDNVPLVAGAMGMYEVAQAG
                     ATGYQAYFVVDGIFWEFLAYCAGTGGSILIIGSAAGVAAMGMEKIDFIWYMKKISILA
                     LIGYLAGAAVYWGQIQILH"
BASE COUNT          804 a          498 c          386 g          784 t
ORIGIN      
        1 ttacataagt acgcgaattc atagccgata gattaggtaa ggttgcaact acattgtccc
       61 acatgcttac ctgagcgcca actccttgct tcttaccatt ccaatcgcgc ttataattaa
      121 ccatcccagg tttaggtgcc ataacaataa attccttctt cagatcattg tattcgttta
      181 gctctcttct tgctttcatt agatttgtag ccacttctcg catatcggct tcagcctttt
      241 gatgcttgat agtataattt tcaatatttt gatttaaagc tctttgtgtc ttttcaagat
      301 caattttaac ctgccgttgg gttactggcg gctcatagat agactgatct acgacaattt
      361 gtttttcttc tagagtaaac tctaaattaa tgagttcatc tcttgccgct cttagagtaa
      421 gagttgtatc taactgagtt ttaataaact gtgtttctaa tttctctact tcaagctctt
      481 gatcagtaat cttattttgc aaatcacttc tatcgagagt tgctacccat tgaccagagt
      541 ctacaactgt gccatcagga actatatcct caatcatata cctgtgaata cgtgcatttc
      601 gcaaagcatt tggatttggc ccttttatat tttcactact ccgggcttcc aattctcctg
      661 tcgtagttac atcaattaca aaggttccct tctcaacttc aacagttata gtattcgctg
      721 tttcaacaga ggaagatgaa aaataccaaa ttagagatat taaaactata aatgatatgg
      781 taagtattat tgtattcttg cgcttcatac ctttaaaata ttaaaagtgt aaaagtaaga
      841 aaattgttgg tgtttaagag tgatttacta atagtaaatt ataagtattt atcccatttt
      901 atatttacaa ataacgatat gttgggcaat aaaaaacccc ggaagtttcc aaccgaggct
      961 atatatacta tagataatct aatgcaatat ttgtatctga ccccaataaa cagcagcccc
     1021 ggcaaggtac ccaattaacg ccagaatact aatctttttc atataccaga taaaatcaat
     1081 tttttccatt cccattgcag ctacacctgc agcagatcct attataagta tacttccacc
     1141 agtacctgca caatatgcaa ggaattccca gaaaatacca tcaacaacaa aatatgcttg
     1201 atatccagta gcacctgcct gtgcaacttc atacattccc attgcacctg caacaagagg
     1261 tacattatca acaattgatg atagtacacc aataatcagg ttgatcacat aaatatcacc
     1321 aacattttta tttagccagt cagcgagtag tgtcagatga cctgcagatt gcatagcagc
     1381 aacagccgat agaattccca taaagaagaa aattgttgga acatcaactt tatgcaatac
     1441 accaattaca gttaatgtgc gacgatcttc atcaggcttt aatcggtgca ttacttctgt
     1501 agtaatccaa ataataccca aactaagtaa catgcccatg tatggtggta gatgcgttac
     1561 tgttttaaat acaggaacaa ataataatcc acctactccc atataaaaca ataagttacg
     1621 ttcgaatggt gtagtaaatt ctttagtttc atgagccgcg agtattggcc ttgtaacatc
     1681 acctttcagt gtaaacgata atattacaac aggaactatc atagttacta aactagggag
     1741 tatcaccatt agaataatat ttagtgtagt tacctgtcct cctatccata acattattgt
     1801 agttacatca ccaattggtg accacgctcc acctgcattg gccgctagaa caaccatact
     1861 agcaaatagc caacgttctt tcttatcatc aattagtttt cgaagtagtg caattaaaac
     1921 aattgttgtt gttaaattat cgagagttgc agacatgaag aaagtgagaa tgctaagtat
     1981 ccataacagc tttactttat tagtggtttt aattctatct gtaataattt taaaaccctg
     2041 atgttggtca actgtttcaa caatcgtcat tgcaccaagt aggaaaaaca atatcgtaga
     2101 tatttccgcc agatgatgca ttacatcatg atgagttata aaattaagca tatcaccaga
     2161 agtgggattg tgtattccgg cttcatgaac atattcgcgc catgactgac ttaggaactg
     2221 gccagcttca ttgagcatgc ttaatatatc agtacgccca aaaacaaaga taacccacat
     2281 tgccatacca agtacaagtg ctgaagctgc tttgtcgact tttaaaggat gctcaagggc
     2341 aatagctgtg taccctagaa caaaaactac tatcattaat ataaacatct cttaatattt
     2401 taaattaata agggcgcaaa tgtatataat caaatcgatt ttatgcatga aagacacgta
     2461 aatatctgaa ag
//
LOCUS       DASCQP010000179         3120 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000708908, whole genome shotgun sequence.
ACCESSION   DASCQP010000179 DASCQP010000000
VERSION     DASCQP010000179.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3120)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3120)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3120
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000708908"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..151)
                     /locus_tag="QF480_03030"
     CDS             complement(<1..151)
                     /locus_tag="QF480_03030"
                     /inference="COORDINATES: protein motif:HMM:NF024803.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HJN05569.1"
                     /translation="MTDKIYFKIGDIANKFNVNTSLIRYWEQEFDFIKPKKNNKGTRY
                     YTNKDI"
     gene            complement(169..1140)
                     /locus_tag="QF480_03035"
     CDS             complement(169..1140)
                     /locus_tag="QF480_03035"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HJN05570.1"
                     /translation="MAKTKYFFNSKSLSYEEAKASPLQRFFKTILFLITTLAFSSGLI
                     ILSYTFFESPKERILKSENSQYELQYQIMNDRLNNLQKLVDEIADRDDNIYRIIFEAE
                     PISKSIRQAGYGGIDRYAKLEGYNNSELLIETSKKLDNIASALYVQSKSFDAVYELAR
                     NKEKMLAGIPAIQPVNNKELKRLSSFYGYRIDPIYKIKKFHAGVDFSAPQGTPIYASG
                     AGTVIKTRRSRRGYGNTVTIDHGFGYTTFYAHNKDNKVKKGDKVVRGQIIATVGNTGK
                     STAPHLHYEVRKNNRTINPIYYFFNDLSPNEFETLLNLSKLPNQSLD"
     gene            1237..>3120
                     /gene="alaS"
                     /locus_tag="QF480_03040"
     CDS             1237..>3120
                     /gene="alaS"
                     /locus_tag="QF480_03040"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009598484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HJN05571.1"
                     /translation="MNSISIRKVFFDFFKSKQHKIVPSAPMVVKNDPTLMFTNAGMNQ
                     FKDLFLGNSPVINPRIANTQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDPSK
                     SKDGYFKNEAISWAWELFTNVYGIHKDQLYATVFEGDNENGLAPDNDSHDIWKKYLPE
                     DRIINGSKKDNFWEMGETGPCGPCSEIHIDIRSEDERKKIPGRELVNKDHPEVIELWN
                     LVFIEFNRLANGKLEKLKSKFVDTGMGFERLAMVLQGVKSNYDTDIFAPIISEIVRLS
                     GKDYRQNEEQDVAMRVMADHLRAVAFAIADGQLPSNIGAGYVIRRILRRAVRYGFTFL
                     GFDDPILYKLLPILDVQLGNVFPEIHSQLKFISDVIKEEEVAFLRTLDHGIKKFDKYI
                     ETHPGNKQVSGDFAFELYDTFGFPIDLTVLIAREKGMTVDMSGYKAGLEAQKKRSRKD
                     AAVDTSDWITVDNFDDTQSSQDVFVGYNSLETKTHVIKYRKVVTNKKTNYEIILGTTP
                     FYAESGGQVSDRGTLNSENEVLQVIDTRKENNQTIHVVKDEPQFPESEFIAKVDEHNR
                     RLITANHSATHLMHSALREVLGNHVEQKGSLVNADKLRFDFSHFGSMTEIEIVEVEKL
                     VNKY"
BASE COUNT         1037 a          504 c          579 g         1000 t
ORIGIN      
        1 caatatcttt attagtataa tatctagtac ccttgttatt cttttttggc ttaataaaat
       61 caaactcctg ttcccaatat cttatcagag aagtgtttac attaaacttg tttgcaatat
      121 cccctatttt gaaatagatt ttatcagtca ttttaggcta attaaacatt agtctaacga
      181 ctgattagga agtttcgaca ggttgaggag agtttcaaat tcgtttggtg aaagatcgtt
      241 gaaaaaataa taaatcggat tgatggttct attgttcttt ctaacttcat aatgcaaatg
      301 aggtgctgtt gatttgcccg tattgccaac agttgcaatt atttgacctc ttacaacctt
      361 atcacctttt ttcactttat tatctttatt atgggcataa aatgtagtgt atccaaatcc
      421 atgatcaatt gttacagtat ttccataacc tcgccgtgaa cgtcgtgttt ttataactgt
      481 tcctgcacca ctagcataaa tgggtgttcc ctgtggtgca ctaaaatcaa cacctgcatg
      541 aaatttcttg attttgtaga taggatcaat ccgataccca taaaaggaag ataatctctt
      601 aagttcctta ttgttaacag gctgaatagc tggaatacca gccaacatct tttctttatt
      661 acgggccagt tcatatacag cgtcaaatga ttttgattgc acatataacg cacttgcaat
      721 attgtctagt tttttagagg tttcgattaa caattcagaa ttattatagc cctcaagttt
      781 agcataacgg tcaattccac cataacctgc ttgcctaata gattttgaaa ttggttcggc
      841 ttcaaaaata attctgtaga tattatcatc tctatcagca atttcatcaa ctagcttctg
      901 taagttatta agcctgtcgt tcattatctg gtattgcagc tcatattgtg agttttcact
      961 ctttaatatc ctttcttttg gagattcgaa gaaagtatat gacagtataa ttaaaccaga
     1021 tgagaatgcc aacgtagtaa ttagaaataa tatagtctta aagaatcgtt gtaatggact
     1081 agctttagct tcttcgtatg aaagagactt actattaaag aagtatttgg tctttgccat
     1141 aatttaactc aatagaaatg ctaaattaat tatttaggct aaatttgcaa tctaataaaa
     1201 ataaatattt caacagaaaa atgttaacta gttgatatga attctattag cattcgaaaa
     1261 gttttttttg atttttttaa gagtaaacaa cataaaattg ttccttctgc accaatggta
     1321 gtaaagaacg atcctacact aatgtttaca aatgcgggga tgaaccaatt taaggatctg
     1381 ttcttaggaa atagtccagt aataaatccg agaatagcca atacacaaaa atgtcttcgg
     1441 gttagtggca aacataacga tcttgaagag gtaggacatg atacatatca tcatacgatg
     1501 tttgaaatgc ttggaaactg gtcgtttggc gatccatcaa aaagtaagga tggttatttt
     1561 aaaaacgaag cgatctcgtg ggcatgggaa ctttttacta acgtttatgg aattcataaa
     1621 gaccagcttt atgctacagt ttttgaaggt gataatgaaa atggtcttgc cccggacaat
     1681 gattctcatg atatctggaa aaaatatctt cctgaagaca ggattatcaa cggttcaaaa
     1741 aaagataatt tttgggaaat gggcgaaaca ggtccgtgtg gtccatgttc agagatccat
     1801 atagacataa gatcagagga cgaaagaaaa aagatacctg gtcgcgaatt agtgaacaaa
     1861 gatcatcccg aagttatcga actatggaat ctggtattta ttgaatttaa caggctcgcc
     1921 aatgggaagt tggaaaaact gaaatctaaa tttgtggata cgggtatggg atttgagcgt
     1981 cttgcaatgg tgttacaagg tgtaaaatct aattatgata ctgatatttt cgctcccatc
     2041 attagtgaaa ttgtaagact ttctggcaaa gattatcgac aaaatgaaga acaagatgtt
     2101 gcaatgcggg taatggctga tcatttaaga gccgttgcat ttgctattgc tgatgggcag
     2161 ttaccttcta atatcggagc aggatatgtc attcgcagga tattgcggag agctgttcgt
     2221 tatggattta cgttccttgg ttttgatgat ccaatacttt ataaactact accaatactt
     2281 gatgtgcagc tgggaaacgt tttccctgaa atacactcac aacttaaatt cattagtgat
     2341 gtaattaaag aagaagaagt tgctttttta agaacacttg accatgggat caaaaagttt
     2401 gataaatata ttgagaccca tcctggaaat aaacaagtat ccggtgattt tgccttcgaa
     2461 ttatacgaca catttggttt tccaatcgac cttactgtac ttattgctcg cgaaaaggga
     2521 atgactgttg atatgtcagg gtataaagca ggtcttgaag ctcagaaaaa acgatcacga
     2581 aaagatgctg cggttgatac tagtgattgg ataactgtag ataattttga tgatactcaa
     2641 agttctcagg atgtttttgt tggttataac tcacttgaaa caaaaaccca tgtaataaaa
     2701 tatcgcaaag ttgttaccaa caaaaaaaca aactacgaaa ttatacttgg cacaactcct
     2761 ttctatgctg agtcaggagg acaagttagt gataggggta ctttaaattc agaaaatgaa
     2821 gtattacagg taattgatac aagaaaggaa aacaaccaaa ctatacatgt tgtaaaagac
     2881 gaaccccaat ttcctgagag tgaattcatt gcaaaggttg acgaacacaa tagaagacta
     2941 attacagcta accatagcgc tactcaccta atgcatagtg cacttcgcga ggtacttgga
     3001 aaccatgttg aacaaaaagg atcactcgtt aatgccgata aattacgttt tgatttctca
     3061 cactttggta gtatgacaga aattgaaata gttgaagttg agaaattggt taacaagtat
//
LOCUS       DASCQP010000180         3538 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000711379, whole genome shotgun sequence.
ACCESSION   DASCQP010000180 DASCQP010000000
VERSION     DASCQP010000180.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3538)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3538)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3538
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000711379"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..112)
                     /locus_tag="QF480_03045"
     CDS             complement(<1..112)
                     /locus_tag="QF480_03045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018028701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight phosphotyrosine protein
                     phosphatase"
                     /protein_id="HJN05572.1"
                     /translation="MKTKILFVCLGNTCRSPSAEAVFKGLVRKKGVQDKFE"
     gene            267..1163
                     /locus_tag="QF480_03050"
     CDS             267..1163
                     /locus_tag="QF480_03050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019540105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional enoyl-CoA hydratase/phosphate
                     acetyltransferase"
                     /protein_id="HJN05573.1"
                     /translation="MIKHLSSLVDLAKNKIKRHIAVAAAGDYHVLKAIAKAYSEGIIE
                     PILVGDKIVIDKIANEIDFDIKNIEVIDAVDAYEASLIASKLTGEGKAEIIMKGLVSS
                     GLFLKAVLNKEFGLRTGSLLSHIALFETPYYHKLLGVTDAAMNVDPDLEEKIDIIKNA
                     VAVFHGLGNKNPKVAILGSVETINPKMEATMHAATISMMNYRKQIVGCIIDGPFALDG
                     AISQETALLKNITSDVAGDADLILAPDINGGNILYKSLNFLGGASSAAVIMGAKVPIV
                     LTSRGDSDKSKFLSIALAAAIT"
     gene            1220..2278
                     /gene="buk"
                     /locus_tag="QF480_03055"
     CDS             1220..2278
                     /gene="buk"
                     /locus_tag="QF480_03055"
                     /EC_number="2.7.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018336385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047761 - butyrate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006113 - fermentation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="butyrate kinase"
                     /protein_id="HJN05574.1"
                     /translation="MAINPGSTSTKIAVYADTNPVFIQIIRHTIEELAQFELITEQFN
                     FRKELIIHELEVAEISLKQIKVVMGRGGLLKPVESGIIAVNEKMILDLESCTYGEHAS
                     NLGGLIAYDLAKSLPDANAYISNPVVVDELSDLARLSGHPLLPRKSIFHALNQKAVAR
                     QHSKSIMRKYEDLNLIVVHLGGGITVGAHKKGRVVDVNQGLDGDGPYSPERTGTLPVG
                     DLVRLCFKGEYSQKQMLKMISNEGGLVAYLGTNSAYEVENRVEAGNKEAKYIYDGMAY
                     QVAKEIGSMVAVLHSEVDGILITGGIAHDKYFVNQVISYVHRMAPVHVYPGEDEMKAL
                     AMNGLRIITGDAEVKIYK"
     gene            2413..3465
                     /locus_tag="QF480_03060"
     CDS             2413..3465
                     /locus_tag="QF480_03060"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="sialidase family protein"
                     /protein_id="HJN05575.1"
                     /translation="MKRFRLLFLFMVTGIIITTIGWAVSDSSDTERERRAKLDTRIDN
                     QGYWKQMAKEGLTVLNPVVEIPKAIFTGSAINNPMVATLNSPDVAVSTNSTQSENSII
                     VDPNNSMTALNSNNSGGAGGTPLYGANDLYTFDGGETFDGETAGAGGNNSGDPAACIG
                     TDGRWYVGYIKSSGQGVAHSDDQGQTWTHVQVTPNPGQMCDKNHLWLDRKVGSPYENN
                     LYDAWTDFGGSSDGEIVLKYSNDNGETWSDRKVISLAVNAGSHNQGVNVHTGPNGEAY
                     AAWCIYDNWPSDETAIGFAKSFDGGETWEASTRIISNIRGIRNSGVPQNMRVAAFPVM
                     TVASFLLSMCQYCIGC"
BASE COUNT         1120 a          574 c          758 g         1086 t
ORIGIN      
        1 tttcaaattt atcttgtacc ccctttttgc gtacaaggcc tttaaaaact gcttctgcac
       61 taggagaacg acaggtatta ccaagacata caaaaagtat ttttgttttc attgtaagta
      121 acttatttat gcaaaatacg attaaattcc tctttaatac aaatgtaatt catgcacatt
      181 tattgtaatt ttgcaaaaaa ttaagtgttg gtgtttaaaa tattaaagct gacattattg
      241 aaaatcaatc attaattatt agcatcatga ttaaacatct ttcttccctt gtagatcttg
      301 caaaaaataa gataaaaaga cacattgcag ttgcggctgc gggtgactat cacgtattaa
      361 aggctattgc aaaggcctat tcagaaggaa ttattgaacc aatacttgtt ggcgacaaaa
      421 ttgttatcga taaaattgct aacgagattg attttgacat caaaaatatt gaagtaattg
      481 acgctgtcga cgcatatgaa gcttctttaa tagcatctaa attaacgggt gaaggaaaag
      541 ctgaaataat tatgaaaggg cttgtaagct ccggattatt tctaaaagct gtgctaaata
      601 aagaatttgg cctacgtaca ggttctctgt tgagccatat tgcgttattc gaaacaccat
      661 attaccacaa gcttttagga gttactgacg cagctatgaa tgtagatcca gatctggaag
      721 aaaaaataga tatcattaaa aatgcggttg cagtttttca cgggcttggc aataaaaacc
      781 ctaaagtggc catactgggt tcagttgaaa ccattaatcc aaagatggaa gccacaatgc
      841 atgctgcaac tatctcaatg atgaattatc gaaagcaaat tgtgggttgc ataattgatg
      901 gcccatttgc tctcgacgga gcaatttcac aggagacagc actattgaaa aacattacaa
      961 gtgatgttgc aggtgatgcc gatctgatac tagctcccga cattaatggt ggaaatatat
     1021 tatacaaatc tttaaatttt cttggtgggg catcttccgc agcagttata atgggggcaa
     1081 aagttccaat agtacttaca tcaagaggtg atagtgacaa gagtaaattt ttatcaattg
     1141 ctcttgctgc cgctataact taaagttatt ttaaatttta cgatctaaat aaatccaatt
     1201 aatggcgacc gtatatattt tggcaataaa tcctggatca acatccacta aaattgctgt
     1261 gtatgctgat acaaacccgg tctttattca aatcattcgt cacactattg aagaacttgc
     1321 tcaatttgaa ttgattactg aacagtttaa ttttcgtaaa gaacttataa ttcacgaact
     1381 cgaagttgca gaaatttctt taaaacaaat taaggttgta atggggcgcg gaggtttact
     1441 aaagcctgtt gagtctggaa ttattgctgt aaatgaaaaa atgattcttg atcttgaatc
     1501 ttgtacttat ggcgaacatg ctagtaacct tggtggacta atcgcctatg atttggctaa
     1561 gtcgttgcca gatgccaacg catatattag taatcctgta gttgtggacg aactcagcga
     1621 tcttgcacgg ttatccggtc atcctctact tccaagaaaa tctattttcc atgcgttaaa
     1681 tcaaaaagca gtggcccgcc aacactctaa atccatcatg agaaaatatg aagatctaaa
     1741 ccttattgtg gtacatcttg gaggtggaat aactgtagga gctcataaaa agggccgagt
     1801 agttgatgtt aaccagggtc tggatggtga tggtccttat tcaccagaaa ggacagggac
     1861 tcttcctgta ggtgatcttg taaggctttg ttttaaaggt gaatactctc aaaaacaaat
     1921 gctaaagatg ataagtaatg aaggtggctt ggttgcatat cttggaacca atagtgccta
     1981 cgaagttgaa aatcgagtag aagctggtaa taaagaagca aagtatatct atgatggcat
     2041 ggcttatcag gttgctaaag agattggatc aatggttgca gtactccatt cagaagtgga
     2101 tggcatatta attacaggag gaatagctca tgataagtat tttgttaatc aagttatttc
     2161 ttatgttcat cgaatggcac cggttcatgt gtatcccgga gaagacgaaa tgaaagcgtt
     2221 agcgatgaat ggtcttagaa ttattactgg tgatgctgaa gtaaaaattt acaagtaaat
     2281 atttttgaat tacttttgtg ccaaatttat ggcataactt atttagtatg gtaagccgtt
     2341 tattatataa ggcaaccatc aaggttagga ctttgtctga cacttgaaaa aaaacattct
     2401 aaaattacaa ttatgaagag atttagatta ttatttttat ttatggtaac tgggattatc
     2461 attaccacaa ttggatgggc ggttagtgat tcttcagata ctgaacgtga acgaagggct
     2521 aaattagata cccggattga caatcagggt tattggaaac agatggctaa agaaggcctt
     2581 actgtactaa atcctgtcgt tgaaatacca aaagctattt tcacaggctc agcaattaat
     2641 aatcctatgg tagcaacact taactcacct gatgttgctg tctcaacaaa ttcaacccaa
     2701 agtgagaatt ctattattgt tgatcctaac aacagtatga cagctttaaa ttcaaataat
     2761 tcaggggggg ccggtggaac accattatat ggtgccaatg acctgtatac gtttgatgga
     2821 ggagaaacat ttgatggtga aactgctggt gcaggaggaa acaacagtgg tgatcccgct
     2881 gcatgtattg gaactgatgg cagatggtat gttggttata taaaaagtag tggacaaggc
     2941 gtggcacatt ctgatgacca agggcaaaca tggactcatg ttcaagtgac tcctaatcct
     3001 ggacagatgt gcgataaaaa ccatttgtgg ctcgatcgca aggtaggtag cccctacgag
     3061 aacaatttgt atgatgcctg gactgacttt ggtggttctt ccgatgggga aatagttcta
     3121 aagtattcaa acgataatgg cgaaacctgg tctgacagaa aagtaattag cttggctgtt
     3181 aatgcaggaa gtcataatca aggagtaaat gttcacactg gtcccaatgg agaagcttat
     3241 gctgcatggt gcatttatga taattggcct tcggatgaga ccgcaattgg atttgctaag
     3301 tcgtttgatg gaggagaaac atgggaagct tctactagaa taattagcaa tattagaggg
     3361 atccgaaatt ctggtgtgcc tcaaaatatg cgtgttgctg cttttcctgt catgactgtt
     3421 gcgagttttc ttttaagcat gtgccagtat tgcattgggt gctagttggt tgtgtgattt
     3481 ctggtgctgt ggtatttggg caggatttct ggcgacattg ttgttgagtg atttctgg
//
LOCUS       DASCQP010000181         2333 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000712410, whole genome shotgun sequence.
ACCESSION   DASCQP010000181 DASCQP010000000
VERSION     DASCQP010000181.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2333)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2333)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2333
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000712410"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            255..536
                     /locus_tag="QF480_03065"
     CDS             255..536
                     /locus_tag="QF480_03065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05576.1"
                     /translation="MRLTRIKTWILLGMIVFIVTSCAPGSANFTVEQAGFFMGLWHGF
                     ISLFTFIISLFSDSVEIYEANNNGGWYNFGFILGISIFYGGSSKGTCRR"
     gene            complement(548..853)
                     /locus_tag="QF480_03070"
     CDS             complement(548..853)
                     /locus_tag="QF480_03070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05577.1"
                     /translation="MITKLIIATIVVFVINIPFGYWRANVKKFSFQWFLAIHIPVPII
                     IALRILVSIGFAWYTYVFFVGAFFLGQSFGAYLQKTKKNKGKLTSSCLICDLIRKKD"
     gene            1176..1249
                     /locus_tag="QF480_03075"
     tRNA            1176..1249
                     /locus_tag="QF480_03075"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1210..1212,aa:Ile,seq:cat)
     gene            complement(1409..>2333)
                     /locus_tag="QF480_03080"
     CDS             complement(1409..>2333)
                     /locus_tag="QF480_03080"
                     /inference="COORDINATES: protein motif:HMM:NF022985.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN05578.1"
                     /translation="ESFIDVETRVLTVNVEVYYTDDSPESSNLLNVAILQDSILGPQT
                     GGGAGNNYNHMHMLRHLVTGQWGLEITPTTAGSLYQNTLTYTIPNDYNDVEVVLEHLE
                     IAGYVTQTQQELISGSRGTVSLSGGPDPLTAGFVAEETLICEPGTAHFTSTSLGDPIQ
                     YEWTFEGGNPETSSLMNPNVYYANIGEYDVTLIVMDAECKRDTTMIADYIQVINCVGV
                     DEEANRIALTVFPNPSQGVVKLNIVADLFNTAELKVIDAMGKVVYEQSNISVNGSFNK
                     DIDLTGYSPGIYFITVSGDDKQVSKKIFLQK"
BASE COUNT          748 a          435 c          394 g          756 t
ORIGIN      
        1 gcactcaagt ttaagcacca accgttgtta ccatttcttt ttttaagaag ggagtacgca
       61 catgaaaatt taatctctta aacttgattt tttaattaat tgaaattaaa acatttaacg
      121 aattatatac acatgaaaat aaagcttgtt aaattgcgca tcgtgcaaac atatatcaaa
      181 aacaaaattt atttgcctaa cttagcgtca ttaacaaaat attaggaatt agtattacta
      241 taattatttt aattatgaga ttaactagaa ttaaaacctg gatattactg ggtatgatag
      301 tattcattgt tacttcctgc gctccaggta gcgcaaattt cacagtagaa caagcaggat
      361 tttttatggg cttatggcac ggatttattt cattattcac ttttattatt agcttgttta
      421 gtgatagtgt tgagatttat gaagccaata acaatggtgg ctggtacaac tttggcttta
      481 tcctgggaat atcaatattc tatggcggta gctcaaaagg tacttgcaga aggtaaaaaa
      541 aaatgaatta atctttcttc cggataaggt cacaaataag acaggaggaa gttaacttgc
      601 ctttattttt tttagttttc tgaagataag caccaaaact ttggccaaga aaaaatgcac
      661 ctacaaaaaa aacataggtg taccatgcaa agccaattga aaccaatatc cttaaggcta
      721 taattattgg caccggaata tgtattgcca aaaaccactg gaaggagaac ttttttacat
      781 tggcacgcca atacccaaaa ggtatgttta taacaaagac tactattgtt gcaataatga
      841 gtttagttat catttattaa tttcgttttt tagaatttac ttgttttagg aaaaaagaat
      901 gtcaataata cattgcaacc tatcaattcc aaagattgcg caaacttaaa aagattttct
      961 attgggtatt attacgcaag aaaagaattg taggataatt atttttttct aattttgcag
     1021 cccgaatttg aattcgttca atttcggtat agcttgaaaa agcgggacct atacctgcct
     1081 gccggcaggc agggctcagg ctttgatttc tttagtaaaa ggaattagtt agtaccgtat
     1141 ttcaagatgt ttgtttacta taaacgcaaa cattgggacc tatagctcag ttggttagag
     1201 tccctgactc ataatcaggt tgtcccaggt tcaagtcctg gtgggtccac tcagacaaga
     1261 gccttaacga ttgtttatca gtgcgttaag gcttttgctt ttaagctgtg tcagccatta
     1321 taaacctgct ctaaaacaaa actgcccttc ccgaaaacat caggaggggc agtttttatt
     1381 tgtataacac cactaggtgc gttaaaattt atttctgcaa gaaaatcttc ttacttacct
     1441 gtttgtcatc acctgaaaca gttataaaat aaatacccgg tgaatatcct gtaagatcaa
     1501 tgtccttatt gaatgaacca ttaactgata tgttactttg ttcataaacc actttaccca
     1561 tggcatcaat tactttgagt tcagccgtgt tgaacaaatc agctacgata ttcagtttaa
     1621 ccactccctg acttgggttt ggaaatacag tcaaagctat cctattggct tcctcgtcaa
     1681 caccaacaca attgataacc tgaatataat cagcaatcat tgtagtatct cttttacact
     1741 cagcatccat tacaattaaa gtaacatcgt attcaccaat attcgcataa taaacattag
     1801 gattcattaa acttgaagtt tcaggattac caccttcgaa cgtccattca tactgaattg
     1861 gatcaccaag acttgtactt gtaaagtgtg ctgttcctgg ttcacagatc agtgtttctt
     1921 cggctacaaa accagcagtt aatggatcag gcccaccact caaagaaaca gttcctcgac
     1981 taccacttat gagttcctgc tgtgtctgag ttacatatcc cgcgatttcc aaatgctcta
     2041 atactacttc aacatcattg taatcgtttg gaattgtata ggttaaggtg ttctgatata
     2101 aagaccctgc ggttgttggt gtaatttcaa gcccccattg tcctgtgacc aaatggcgta
     2161 gcatatgcat atggttataa ttattaccgg caccgccacc tgtttgaggt cctaagatac
     2221 tatcttgtag tatggccaca tttaaaagat tactcgattc cggactgtca tcagtataat
     2281 atacttcaac attgacagta agcacacggg tttcaacatc aataaaagat tcc
//
LOCUS       DASCQP010000182         2401 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000712856, whole genome shotgun sequence.
ACCESSION   DASCQP010000182 DASCQP010000000
VERSION     DASCQP010000182.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2401)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2401)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2401
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000712856"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..553
                     /locus_tag="QF480_03085"
     CDS             <1..553
                     /locus_tag="QF480_03085"
                     /inference="COORDINATES: protein motif:HMM:TIGR04131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="gliding motility-associated C-terminal
                     domain-containing protein"
                     /protein_id="HJN05579.1"
                     /translation="IDYIFTENVIINPLPSVDIEMGNDTIYILPNSSIRLDAGEGFDI
                     YTWTPGGSSSQYLDVTAEGLYSVSVTDLNCCTNTDAVYIKFASLAYPTAFKPTSSIAE
                     NQTFTVMGNIGAIAKFQLRIFNRWGQMIFESDNPTEGWDGNVNGSPAPLGTYVYSSVF
                     TSFESGIQSSIDIKNTGTITLIR"
     gene            688..>2401
                     /locus_tag="QF480_03090"
     CDS             688..>2401
                     /locus_tag="QF480_03090"
                     /inference="COORDINATES: protein motif:HMM:NF020928.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tex-like N-terminal domain-containing protein"
                     /protein_id="HJN05580.1"
                     /translation="MTSFASQIATTLNVADWQVTNAIELIVDGATIPFIARYRKERTG
                     ELTDIELLELEKLYYRHLQLEERKKTVLNSLEEQGVITAELKQQVTSSQTLAEIEDIY
                     LPFKPKRKTRAVIAQGRGLEPLAKMIMSENLSNVEEVAQRYVSVKSGVNNIDDALSGA
                     RDIIAEWLSERQWVRQKLRTLFEKDSILISKAVKGKETDHDNNRGEKYEAWFDWREIA
                     RKAPSHRLLAVFRGEKEGFLKIKILPELETAIHILTSRLLKNNNDTTNQKELAIVDST
                     KRLLFPSLETELRSNLKEKADEASIKVFCDNLQQLLLSPPLGQKRVLAIDPGFRTGCK
                     IVCLDKNGSLLHNDTIYPHPPQRDMKMAMKKINNLVDSHNIEAIAIGNGTAGRETEQL
                     IERMRFSRDIIAVMVNEDGASVYSASSNAREEFPEYDVTVRGAVSIGRRLLDPLAELV
                     KIDPKSIGVGQYQHDVNQKLLKQGLQSTVELCVNKVGVNLNTASRELLTYVSGLGSKL
                     ALQIIDYRNQNGNFNNREELKKVTGLGNKAFQQAAGFLRIKDGDNILDSTAVHPEQYP
                     IVKKI"
BASE COUNT          830 a          394 c          476 g          701 t
ORIGIN      
        1 tattgattat atctttacag aaaatgttat aataaatcca ttgcctagtg ttgacattga
       61 aatgggaaac gacaccattt acattcttcc taattcatca attaggctag atgccggtga
      121 aggtttcgat atttacacat ggacacctgg tggaagctct agtcaatatt tagatgtgac
      181 cgcagaagga ctatactctg tttcagtaac tgatcttaat tgttgtacaa atactgatgc
      241 tgtttacatt aagtttgctt cattagccta tccaactgct tttaaaccga caagcagcat
      301 agctgaaaac caaacattta ctgtaatggg aaatattgga gcgattgcaa aattccagct
      361 tagaatattt aatagatggg ggcagatgat ctttgaatca gataatccta ctgaaggttg
      421 ggacggcaat gttaatggat cacctgcacc gttaggcaca tatgtgtatt cttcagtttt
      481 cacaagcttc gaaagtggaa tacagtcgag tattgatata aagaacacgg gaacaattac
      541 tcttattagg taataaaggt ataagagtat aaagatatta attttatcag ctatttccct
      601 atacccatat ttccattttt ttctaaattt cgaataaaat actttaattt gagttaatat
      661 taatcagtaa ttaacattta caatattttg acttcatttg cttcacaaat tgcaactact
      721 cttaatgttg ccgattggca agttaccaat gcaattgaac taatagttga tggtgccact
      781 atccccttta tagctcgata tcgtaaagag agaacagggg aactgacaga cattgagctg
      841 ttggaattgg aaaaactgta ttacaggcat ctccaacttg aggaacggaa aaaaacagtt
      901 ttaaattcac ttgaagaaca gggagtaatc acagcagaac ttaaacaaca ggtaacttca
      961 tcacaaacac ttgccgagat tgaagatatt taccttccat tcaaacctaa aagaaaaaca
     1021 cgcgcagtaa ttgctcaagg tagaggtctt gaacccttgg caaagatgat catgtcggaa
     1081 aacctaagca atgtagaaga agttgcccaa cgatatgttt ctgtaaaatc aggtgtaaat
     1141 aatatcgatg atgctttgag tggtgcccgg gatataattg ccgaatggtt aagtgagcga
     1201 caatgggttc gtcagaagct acgtacactt tttgaaaaag atagtatact gatctcaaaa
     1261 gcagttaagg gaaaagaaac tgaccacgat aacaatcggg gcgaaaaata tgaggcttgg
     1321 ttcgactgga gagagattgc aagaaaagca ccatcacata gactactggc agtttttagg
     1381 ggcgaaaagg aaggattttt aaaaattaaa atactacctg aactggaaac tgctatacat
     1441 attcttactt cacgattgtt gaagaataat aatgatacaa caaatcaaaa ggaactggca
     1501 attgttgatt ctacaaaaag attgttattt ccatctcttg aaacagagtt gcgttctaat
     1561 cttaaagaaa aagctgacga agcctcaatt aaagtatttt gtgataatct acaacagcta
     1621 cttctttcac cacctttggg acaaaaaaga gtgctagcaa ttgatccggg ttttcgtact
     1681 ggatgtaaga ttgtttgtct tgacaaaaat ggtagtttac ttcataacga cactatatac
     1741 ccacatccac cacagaggga tatgaagatg gcaatgaaaa aaattaataa tcttgttgat
     1801 tctcataaca tcgaagctat tgctattggc aacggcactg caggacgtga aacggagcaa
     1861 ctaattgaac gaatgagatt tagtcgtgat attattgctg ttatggttaa tgaagatgga
     1921 gcatctgttt actctgcgtc atccaatgca cgtgaggaat ttcctgaata tgacgtaaca
     1981 gttagaggtg ctgtttctat tggaagaagg ctgcttgacc cacttgccga acttgtaaag
     2041 attgatccaa aatcgattgg ggttggccag tatcaacatg atgtgaatca gaagttatta
     2101 aaacaaggat tacaatcaac tgttgaattg tgcgtaaata aagttggggt gaatctaaat
     2161 acggctagta gagagttgtt aacttatgtt tctggattag gatcaaaact ggccttgcag
     2221 attattgatt atagaaatca aaatggcaac tttaataaca gagaggaatt aaaaaaagta
     2281 acaggtcttg gaaataaggc attccaacag gcagcaggtt ttctacgaat aaaagatggt
     2341 gacaatattc ttgattcaac tgcagttcat cccgagcaat atcctatagt taaaaaaatt
     2401 g
//
LOCUS       DASCQP010000183         8617 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000715107, whole genome shotgun sequence.
ACCESSION   DASCQP010000183 DASCQP010000000
VERSION     DASCQP010000183.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 8617)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8617)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8617
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000715107"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            334..1677
                     /locus_tag="QF480_03095"
     CDS             334..1677
                     /locus_tag="QF480_03095"
                     /inference="COORDINATES: protein motif:HMM:NF014757.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase family protein"
                     /protein_id="HJN05581.1"
                     /translation="MTYEERLQNVSVLGAAGKMGSGILLLTAVEMADLSMKPENKDKS
                     FVLNAIDVSPAGLAGLMKYLREQIRKVAERKTVQLRKVYADRDDLIENYDIIDEYIFD
                     VMNVIRPVTNMSAAYDSNLIFEAVSENRALKVKLLSDIDRNNKNNPWYFTNTSSVPIS
                     LIESEAGIDGRVIGFHFYNPPAVQRLVELIKTNNTKEEVVEFAHLFAKNLRKIIVPSN
                     DFAGFIGNGHFMRDALHGMKEAEALAAEKNIPLYQAIYMINKVTQDYLVRPMGIFQLV
                     DYVGIDVVQFILNVMNPFVSDEDLHSDLLDKMILQGVKGGQKSSGAQKDGFLKYKGSR
                     VTSVWDIHKQTYVDIDEFKDECDDMLGTLPDSAVAWKSILRNKKKGDLLASFFNDLKS
                     SDALGALTAVKYGRRSKEIGEKLVADEVANEIDHVNTVMLTGFFHAYGPVNNFFD"
     gene            1695..2930
                     /locus_tag="QF480_03100"
     CDS             1695..2930
                     /locus_tag="QF480_03100"
                     /inference="COORDINATES: protein motif:HMM:NF014820.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05582.1"
                     /translation="MRKKVYMTGGYNTVSMGTGRNEFHPKKPRPDLEHYIKEAGQGTL
                     KQIGGADNVDETVIGNFMAARFNKQAHLTGFAPIIDDGLQWKPAISVEGACGSGGLAL
                     MSGIKSVLAETANVVLSLGVEVQNTVKAIYGADILAGAGWYKNRKNGHAYFFPGQFSN
                     RAGAYYEKVGYDRARAGMKRWFRNAMENARLDETAQEHHNKTADIDALYDKIKPNGAA
                     FVDNLSVLDCSKVSDAASAIAICSEEGLKRIGIDKKNAVEVVGFAQVVRNITNDPTDL
                     TELETIKKAAHMALKDAGITIDQLATIETHDCFSVAGILTIEALGFASPGEGADYVAA
                     GNTARDGAIPMNTTGGLIGWGHPTGATGVHQAVTIWQQLTDKAGKAQIDISDDRPYGM
                     TINMGGDDVTVIAIIYKRG"
     gene            complement(2949..3365)
                     /locus_tag="QF480_03105"
     CDS             complement(2949..3365)
                     /locus_tag="QF480_03105"
                     /inference="COORDINATES: protein motif:HMM:TIGR00149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="secondary thiamine-phosphate synthase enzyme
                     YjbQ"
                     /protein_id="HJN05583.1"
                     /translation="MNTITISTHKREGLYDITREVEEIVNHSNVETGLVNVYAQGATA
                     AIMIQENWDESVQLDVVNFFQKIIPKGIWLHDAQDGNGDSHLKAGLVGPSETIPIING
                     KIGLSTWQNIFFCEFDGPRSNRNIVVTITEAIDKMK"
     gene            complement(3376..4935)
                     /locus_tag="QF480_03110"
     CDS             complement(3376..4935)
                     /locus_tag="QF480_03110"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006743943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase/oxidase"
                     /protein_id="HJN05584.1"
                     /translation="MKRDNLIAIKIASTTLWDIAIIGGGATGVGAALEGASRGYKVLL
                     IEQSDFGKATSSRSTKLAHGGVRYLQQGNISLVLEALKERGIMRNNAPHLVHELPFIV
                     PVYDWWEGPFYGIGLKIYDMLAGKAGFGPSKFLSKEETIESIPTVEIEGLKGGIIYHD
                     GQFNDARLLINLVQTANEQGATMLNYVKAVAFTKENDRITSIEAQDIDTGKNFNIKAK
                     VIINATGVFTDSVRKMDDNQTQDIITGSQGVHLVLNKSFLPGDSGIMVPHTQDGRVLF
                     AVPWQGRTLIGTTDTFVNNYTLEPIPFESEITFLLEHAAKYLTKDPQKSDIKSAFAGL
                     RPLVTKSNNNDTASISRDHSISISKSGLISISGGKWTTYRRMGEDAIEQAILLRNLPK
                     SESVSGTLQIHGYHKNSHNYGALSHYGSDANKIEELLNEKHEYSELLHPEHTIRKGEI
                     VWAVRNEMAKNIEDFLARRTQLLILDAKASIESAPIVAKIMDKELRRGRRWRKNQIQQ
                     YIKLANNYIPD"
     gene            complement(4932..5933)
                     /locus_tag="QF480_03115"
     CDS             complement(4932..5933)
                     /locus_tag="QF480_03115"
                     /inference="COORDINATES: protein motif:HMM:NF019436.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05585.1"
                     /translation="MANVIIGIHGLGNKPPKKTLEKWWKLAMIEGLQTYNYHSTLPKF
                     ELVYWADIMYEELQSVAEKDEGSPLFLKEKYVVAPGDFPIENHNTRKKIVDFLGKQLN
                     SIFLNKDLSLNYSFIADAIVSKFFKDLEIYYTEDCPDDDDRLCKAQDLIKNRLIQVLK
                     KYKSDRIMLISHSMGSIVAFDVLSFHALNTPVHTFITTGSPLGLPVVISKIAAEKKQK
                     LPDENTMLTPPNVTKNWYNFSDILDRVAFNYKLTDDFMENKYRVIPIDFLVVNNYEIN
                     GKRNPHKSYGYLRTPEFSNILNDFIQTEKLTLKQKVFRSIIQIVTVIKYKFTKSNRI"
     gene            complement(5945..6700)
                     /locus_tag="QF480_03120"
     CDS             complement(5945..6700)
                     /locus_tag="QF480_03120"
                     /inference="COORDINATES: protein motif:HMM:NF015000.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase family
                     protein"
                     /protein_id="HJN05586.1"
                     /translation="MAENIIIAHRGESYDAPENTLAAINLAWKRKVQAVEIDVQLTND
                     NEIVVIHDKDTLRISGKKKIIRKSSLKELKLLNAGFHKDEKWQGEHIPCLREVLATVP
                     PNCKLIIEIKSDESILPQLANELAQTNLSTTQLELIAFNETTLAKAKQLMPEYRMLWL
                     IGLDYKLSWWLAWINKRRIISKVKKLKLDGVNVWAGKLLTSSFISKFKGAGLYLYAWT
                     VNDPEKARSLINEGIDGLSTDRAYWMTEQLKKY"
     gene            complement(6716..7411)
                     /locus_tag="QF480_03125"
     CDS             complement(6716..7411)
                     /locus_tag="QF480_03125"
                     /inference="COORDINATES: protein motif:HMM:TIGR00035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/glutamate racemase family protein"
                     /protein_id="HJN05587.1"
                     /translation="MKTIGLIGGMSWESSSVYYKLINKKVKETLGGFHSCKSIMVTVD
                     FAEIEKLQHQNEWLALDKMMAESAKQLELAGADIVILCTNTMHLCSSAIMENISIPFL
                     HIAEATGMEIKNKNLKKVGLLGTKFTMEKNFYKDYLFNRFGVEVIIPTDEERKTVHNI
                     IYQELVKGNIKSDSREIYKQIIKNLEQRGAEGVILGCTEIPSLISESDVDIPVFDTTT
                     IHAEKAVEWSLSE"
     gene            complement(7454..8401)
                     /locus_tag="QF480_03130"
     CDS             complement(7454..8401)
                     /locus_tag="QF480_03130"
                     /inference="COORDINATES: protein motif:HMM:NF024869.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XdhC family protein"
                     /protein_id="HJN05588.1"
                     /translation="MNNWSFIEEKLSEENSLYLMMVVDSKGSSPGKPGFSMAVSSDDE
                     LYGSIGGGSMEYKLVEYCKKLLRNNEHNIFLKKQIHNGSNEDSSGLMCSGEQTIAFLH
                     LSASDMKNIRRITSCLDNNKSGIFSLTENQYSFTLSEDVQESQFFFSGKNNDWLYKEI
                     IGFKNNISIIGAGHVGFALSKLFSQLGFKVFLYDNRNNFKMFNENPFADKKFVIDYKK
                     ADQYVVHGSNSYVVIMTNNHKHDIDVLRALIDKKVNYLGLMGSKNKVSRLKKKLKNEG
                     ATDDELSRLYAPIGISIHSQTPDEIAISIAAEIINVKNA"
BASE COUNT         2590 a         1566 c         1502 g         2959 t
ORIGIN      
        1 aatcattatt gtgtatcctc caaacagcac caggaagaag gttattacaa tacttgaaaa
       61 agtaactttt tgcatcttag tttggtttta attttgatgg tgtaaagata gacaatgtgt
      121 tagtttattt ggttgtccaa gcaaggtttt tgaatttgcg ccaaatgttg tcatcctagc
      181 aggttttttc caacccaatg ggttgcaaca tgattcttca ttacatcaaa ttatttgatt
      241 caaaaaaagt aatttagaca gattctagca tcaataattg gtctaaattt attaattttg
      301 aaccttttga tcatagacat aataaacaca aatatgacct acgaagaaag attacaaaat
      361 gtatcggtac ttggtgccgc aggtaaaatg ggtagcggaa tattgctgct aactgcagtt
      421 gaaatggccg acctaagcat gaagcctgaa aacaaggata agtcatttgt cttaaatgca
      481 attgatgtat cgcctgcagg cttggcaggg ttgatgaaat atctacgtga acaaatacgt
      541 aaagttgctg agagaaaaac tgtacaactg cgtaaagttt atgctgaccg tgatgatctt
      601 attgagaatt acgatatcat tgatgagtat atttttgatg taatgaatgt aatcagacct
      661 gttactaata tgtcagcagc ttatgattcc aacttgatct ttgaagctgt aagcgagaac
      721 agggctttaa aagtaaaatt actgtcggat attgatcgta ataataaaaa taacccatgg
      781 tattttacta atacatcatc ggtcccaata agtcttattg aaagcgaagc tggaattgat
      841 ggacgtgtaa tcgggttcca tttttataat ccgccggcag tacagcgttt agttgagttg
      901 attaaaacta acaacacgaa agaagaagtt gttgagtttg cccatttgtt tgctaaaaat
      961 ctcagaaaaa taattgttcc ttctaatgat tttgcaggat ttataggaaa cggacatttt
     1021 atgcgtgatg ctcttcatgg catgaaagaa gctgaagctc ttgctgctga aaaaaatatc
     1081 ccgttatatc aggcaattta catgataaac aaagtcacac aggattatct tgtgcgacca
     1141 atgggaatat ttcaacttgt tgattatgta ggtattgatg tggttcagtt catacttaat
     1201 gtgatgaatc cgtttgtaag tgacgaagac cttcatagtg atcttcttga caagatgata
     1261 cttcagggag ttaagggtgg acagaaatct agtggtgcac aaaaggatgg tttccttaaa
     1321 tacaaaggat ctagagtaac ctcagtatgg gatattcata agcaaactta tgttgatatt
     1381 gatgagttta aagatgagtg tgacgacatg ctaggaactc ttcccgactc agcggttgca
     1441 tggaagtcta ttctaagaaa taaaaagaaa ggtgatctgt tggcttcatt ctttaacgat
     1501 cttaaatcgt cggatgcttt gggtgcactt acggcagtaa aatatggacg tcgctcaaag
     1561 gaaattggtg aaaagcttgt agctgatgag gtcgctaacg aaattgacca tgttaacacg
     1621 gttatgctta caggcttttt tcatgcttat ggcccggtaa ataacttctt tgattaactc
     1681 ttaaattcag aaaaatgaga aaaaaagtat atatgacagg cggttacaac accgtatcga
     1741 tgggaacagg acgcaatgag tttcatccta agaaacctcg ccctgatttg gaacattata
     1801 tcaaagaagc cggacaggga acacttaagc aaattggcgg tgctgacaat gttgacgaaa
     1861 ctgtaatcgg aaattttatg gctgcacgct tcaacaaaca agctcatctc acaggctttg
     1921 caccaataat tgatgatggt cttcaatgga agcctgctat tagtgttgaa ggtgcatgtg
     1981 gttcaggcgg actagcactt atgagtggga taaaatcggt attagccgaa acagctaatg
     2041 tagtattatc acttggtgtt gaagttcaaa atactgttaa agcaatttac ggtgctgata
     2101 ttctggctgg tgccggatgg tataaaaatc gtaaaaacgg acatgcatat ttctttccag
     2161 gacaatttag taacagggca ggggcatact acgaaaaagt tggttatgat cgtgctcgtg
     2221 ccggcatgaa gagatggttt cgtaatgcta tggaaaatgc acggttggat gaaacagcac
     2281 aagaacatca taataagact gctgatattg atgcattata tgacaaaata aaaccaaatg
     2341 gtgctgcttt tgttgataac ctcagtgttc ttgattgctc aaaagttagt gatgctgcat
     2401 cggcaatagc aatatgctca gaggaggggc tgaagagaat aggtattgat aaaaaaaatg
     2461 ctgttgaagt tgttggattt gcacaggtag ttagaaatat caccaacgat ccaacggact
     2521 tgacagaact tgaaaccatt aaaaaggctg cacacatggc attgaaagat gctggaatta
     2581 ctatcgatca attagctact attgaaacac acgattgctt ttcagtagca gggattctta
     2641 caatcgaagc tcttggattt gcttcaccag gtgaaggtgc tgattatgtg gctgcaggaa
     2701 atactgcccg tgatggtgcc atcccaatga acacaacagg tggcttaata ggatggggtc
     2761 atccaactgg tgccacaggc gttcatcagg ctgtaactat ctggcaacag cttaccgata
     2821 aagccggaaa agcacaaatt gacatttcag atgaccgccc ttacggaatg actataaata
     2881 tgggtggtga tgatgtaact gttattgcaa ttatttataa aaggggatag taaattaata
     2941 cctaaatctt atttcatttt atcgattgcc tctgtaatag ttacaactat atttctattg
     3001 ctacgaggtc cgtcaaattc acagaaaaaa atattctgcc atgttgaaag acctattttt
     3061 ccattaataa taggaatggt ttcggaagga ccgaccaagc cagctttaag atgagaatct
     3121 ccattcccat cctgtgcatc atgtaaccaa atacctttcg gtattatttt ttggaaaaaa
     3181 ttaaccacgt ctagttgcac actttcgtcc cagttttctt gtatcattat agctgctgta
     3241 gcgccctgag cataaacgtt aaccaaacca gtttcaacat ttgaatggtt cacaatttcc
     3301 tccacttcac gagtgatgtc gtacaaacct tctcttttgt gtgtgctaat tgtgattgtg
     3361 ttcattgttt tctttttaat caggaatata attattagct agtttaatgt attgttgaat
     3421 ctggtttttt ctccatctac gacctcgacg caactcttta tccataatct tagcaacaat
     3481 tggagcagac tctatacttg cttttgcatc gagaattaaa agctgtgttc gacgtgctaa
     3541 aaagtcctca atatttttgg ccatttcatt tcggacagcc cagactattt cacctttacg
     3601 aattgtatgt tcaggatgta ataactcact atattcatgt ttctcattta ggagttcttc
     3661 aattttgttg gcatcagaac catagtgact taaagcacca tagttatgag aatttttatg
     3721 atacccatga atttgtagag taccacttac cgattcactt ttaggtagat tcctaagaag
     3781 tattgcttgt tcaatggcat cttcgcccat tcttctataa gttgtccatt tcccacctga
     3841 aattgaaatc agtccacttt ttgaaatgga tatcgaatgg tctctggaaa tagacgcagt
     3901 atcattatta ttactttttg ttactaatgg gcgtaaacct gcgaatgcac tttttatgtc
     3961 acttttttgt gggtcttttg ttaaatactt tgcagcgtgt tctaacaaaa aagttatttc
     4021 actttcaaaa ggtatcggtt ccaatgtgta attgtttaca aatgtatctg ttgttccaat
     4081 tagtgttctt ccttgccatg gcactgcaaa aagtactctt ccgtcttgtg tgtgaggtac
     4141 cataattccc gagtctccag gcaagaaaga tttattaagg actaaatgca ctccctggct
     4201 accagttata atatcctgcg tctgattatc atccattttt ctaacagaat ccgtgaacac
     4261 acctgtagca ttgataatta cttttgcttt aatattgaag tttttacctg tatcaatatc
     4321 ctgagcctca atacttgtta tacgatcatt ttctttagta aacgctacag ctttaacata
     4381 attaagcata gttgcccctt gttcattagc tgtttgaacc aaattaatta ataagcgggc
     4441 atcgttaaac tgaccatcgt gataaataat tccacctttg agaccttcga tttcaactgt
     4501 ggggatagat tcaattgttt cctctttgga aagaaatttc gagggaccga atccggcctt
     4561 tccagcaagc atatcataaa tcttaagccc aataccataa aacggtcctt cccaccaatc
     4621 gtatacagga acaataaatg ggagttcgtg taccaggtga ggagcattat tacgcataat
     4681 tcccctctct tttaatgcct caagaactaa tgaaatattt ccctgttgta aataccgcac
     4741 ccctccatga gctaattttg tgcttcggct ggaagttgct tttccgaaat ctgactgttc
     4801 gattaataaa accttatatc cacgtgatgc tccttcaaga gcggcaccaa cacctgtggc
     4861 tccacctccg ataatagcaa tatcccacaa tgtggttgat gctattttga tagcaattag
     4921 attatcccgt ttcatattct attgcttttt gtgaatttgt atttaatcac ggtaacaatt
     4981 tgtatgatgc tacgaaatac tttttgtttc aaagttaact tttctgtttg gataaaatcg
     5041 tttagaatat ttgaaaattc aggagttctt aaatatccat aagatttatg tgggtttcgt
     5101 ttcccgttaa tttcataatt attaaccact aaaaaatcaa ttgggataac tctgtatttg
     5161 ttctccatga aatcgtcagt cagtttataa ttaaaggcta ctctgtcaag aatatcggaa
     5221 aaattatacc agttcttagt tacatttgga ggcgttaaca tagtattttc atcgggtagc
     5281 ttctgtttct tttcagcggc aatcttactt attactactg gtaagcctaa tggagagcct
     5341 gtagttataa aagtgtgaac aggggtgtta agtgcatgaa aactaaggac atcgaatgcc
     5401 acaattgagc ccatcgaatg gctaataagc ataattcgat cagacttata cttttttaat
     5461 acttgaatca gtcgattttt aattaagtct tgtgccttac acaacctatc atcgtcgtca
     5521 ggacaatctt ctgtataata aatttctaaa tctttaaaaa atttacttac aatggcatcg
     5581 gctatgaatg aataattcag gcttaaatct ttgttcagaa aaatactatt aagttgtttt
     5641 cctaaaaaat caacaatctt tttccgcgta ttatggtttt ctataggaaa atcgccagga
     5701 gctactacat atttttcttt caaaaaaagt ggactacctt catccttttc agcaacactt
     5761 tgcaattctt catacattat atcggcccag tagaccagct caaattttgg caaagtagaa
     5821 tgataattgt atgtttgtaa tccttcaatc attgcaagtt tccaccactt ttctaatgtt
     5881 tttttaggtg gtttgttgcc tagcccatga attccaatta taacatttgc catattgttg
     5941 gtaatcagta tttctttaat tgttccgtca tccagtatgc tctgtcggtt gatagtccat
     6001 caataccttc gttaattagt gacctagctt tttccggatc gttaactgtc caagcgtata
     6061 agtacaatcc agctccttta aatttcgaaa taaaactact ggtaaggagt tttcctgccc
     6121 atacatttac tccatcaagt ttaagttttt ttactttgct aatgattctt cttttattaa
     6181 tccacgcaag ccaccatgat aacttataat caagtccaat taaccacaac attctatatt
     6241 caggcatcaa ttgtttggct ttggctaaag tagtttcgtt aaaggctatt agctctaatt
     6301 gtgtggtact tagatttgtt tgagctagtt catttgctag ttgtgggaga atgctttcat
     6361 cgcttttaat ttcgataatc agtttgcaat tgggaggaac agtagccagc acctcacgaa
     6421 gacagggaat atgttcacct tgccattttt catctttatg aaagccagca ttgagaagtt
     6481 ttaattcctt tagcgatgat tttctgatta tctttttctt tcccgaaatt cttaaagtgt
     6541 ctttatcatg aataacaaca atctcattat cattggttaa ttgaacatca atttcaactg
     6601 cttgcacctt tcttttccag gcaagattta tagcagcaag tgtgttctca ggtgcatcat
     6661 acgattctcc tctgtgtgct attattatat tttctgccat tatttcacag atcaattatt
     6721 ctgacaatga ccactctact gctttttctg catgtattgt tgtagtatca aaaacaggaa
     6781 tatcaacatc tgattcagat attaacgatg gaatttcagt acatcctagt attactcctt
     6841 cagctcccct ttgctccagg ttcttgatta tttgtttata aatttctctg gaatcacttt
     6901 taatattacc cttaacaagt tcctgataaa ttatattgtg aactgttttt ctctcctcat
     6961 ctgtaggaat aattacttca acaccaaacc tgttgaacaa ataatctttg taaaagtttt
     7021 tttccattgt aaatttcgta cccaatagac caactttctt taagtttttg ttcttaattt
     7081 ccatgcctgt tgcttctgct atgtgaagga aagggattga gatattttcc ataattgcag
     7141 aactgcataa atgcatagta tttgtacata ggataacaat atctgcccct gctaattcca
     7201 gttgttttgc tgattctgcc atcattttat ctaaagccaa ccattcattt tgatgttgta
     7261 atttttcaat ttcagcaaaa tctaccgtaa ccattatgct tttacaagaa tgaaatccgc
     7321 ctagagtttc ctttactttt ttatttatta atttataata gactgaagat gattcccagc
     7381 tcatcccacc aattaatcca atagttttca tgagttttat tctctttgtt acattacagt
     7441 ttgaaaatgg cttctacgca ttctttacat tgataatttc tgcagcaatg cttatagcaa
     7501 tctcatcagg cgtttgacta tgaatagata ttccaattgg ggcgtatagc ctacttaatt
     7561 catcatcagt tgcaccctca tttttcaact ttttctttaa tcttgatact ttatttttgc
     7621 ttcccatcaa gccaaggtaa ttaacttttt tatcaataag tgctctaaga acatcaatat
     7681 cgtgtttatg attatttgtc ataattacaa cataggagtt acttccatgt acaacatact
     7741 ggtcagcttt tttgtagtct attacaaact ttttgtctgc aaacggattt tcattgaaca
     7801 ttttaaagtt atttctgtta tcatacaaaa aaactttaaa acctaattga gaaaataatt
     7861 ttgataatgc aaacccaaca tgtcctgcac caataatgga gatattgttt ttaaaaccga
     7921 ttatttcctt atacaaccaa tcattatttt taccagaaaa gaagaactga gattcttgaa
     7981 cgtcttctga taaagtaaaa gaatattgat tttcggttaa actaaaaata cctgatttgt
     8041 tattatcaag gcaggatgtt atacgcctta tgtttttcat atcagaagca gataaatgta
     8101 gaaatgcaat agtttgctca ccggaacaca tcagcccgga gctatcctcg ttacttccat
     8161 tatgtatttg ttttttaagg aaaatattat gttcattatt tctaagcaac tttttgcaat
     8221 actccactag cttgtattcc atagatcctc ctccgataga tccatataat tcgtcatcac
     8281 tgcttactgc catgctaaag cctggtttgc cgggactgct tcccttgctg tcaacaacca
     8341 tcattaagta aagagaattt tcttcgctca gtttttcttc tataaaactc caattattca
     8401 ttatttaatt aagtaggttt agtaacaact tgttttttcg gttttctttt ctaattcagc
     8461 aataatagtt atttcttcat aaactcgata aactcattat gagaattaat attgagtaat
     8521 attgaatcat cttgtacttc aactcctttt gtttggaact tttgcaggac ttcgttaaga
     8581 ttaagattat gatctttttc atgcactata taatcgc
//
LOCUS       DASCQP010000184         3241 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000718737, whole genome shotgun sequence.
ACCESSION   DASCQP010000184 DASCQP010000000
VERSION     DASCQP010000184.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3241)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3241)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3241
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000718737"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..297
                     /locus_tag="QF480_03135"
     CDS             <1..297
                     /locus_tag="QF480_03135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05589.1"
                     /translation="YGSFKLNEIGAHVKNVKLTSYNTSVNLYFRKAYNYYINLISDDK
                     AEITYSATLGDFTTKKLPGKEKLKQAECVIGERTKAIPITIDIKSGLLTLKIKD"
     gene            377..1156
                     /locus_tag="QF480_03140"
     CDS             377..1156
                     /locus_tag="QF480_03140"
                     /inference="COORDINATES: protein motif:HMM:NF022441.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head GIN domain-containing protein"
                     /protein_id="HJN05590.1"
                     /translation="MKNRNIIIIVSFLSVIILWNTGCRKFPFLEGNGNVTTETRTTVS
                     FNKIENQGEFNVYYVHDTVFRVVIKAESNLIPYIRTIVHGNTLEIDSRENLNPNDAMK
                     IWVHTPTLVGVKLSGSGLINAESVTAANFEVILSGSGYVYGDAITGHFKSTLSGSGEI
                     DFDLNSEITSAVLSGSGRIKLSGESPTADYIISGSGTIDAVNLQLNECIAKISGSGNI
                     YTSVSDYLNVTISGSGNLYYFGYPDIDSNITGSGSVISNNK"
     gene            1156..1680
                     /locus_tag="QF480_03145"
     CDS             1156..1680
                     /locus_tag="QF480_03145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05591.1"
                     /translation="MKKLIPVILLTITGLFAHSQSFESQLGVRLGPTSGITGKIIKNK
                     KTAIEGTLGFRKGGVQLYVLLESYKMLNKNTKQNWFVYFGGGAHVGYLNGYNKVRRWS
                     NTQGYYWEEEHTLGPVIGLDGVMGVEYNIPSIPITLFFEFKPLVELQSFNKIRANFYD
                     TGFGIVYRFNNKLN"
     gene            1686..2375
                     /locus_tag="QF480_03150"
     CDS             1686..2375
                     /locus_tag="QF480_03150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05592.1"
                     /translation="MKTFKLISVIFALIIGFSAIAQENSEEMKTLFKRSGTEKISNGG
                     YGSFSIGYTSIDSKDALQLGGRVAWIANHRFALGLAGYGFVNNLQKNYNSNDDPSKYF
                     LAGGYGGIFFEPILMPNKPVHVSFPVILCVGGITAVESNNWDYSNNNHNQNYYYDSDA
                     FLVFEPGVDVEFNIVKFFRIALGASYRLTNNVNLTYKYLDNNYDEHIVQIDKNALNSF
                     NFHIGFKFGWF"
     gene            complement(2451..>3241)
                     /locus_tag="QF480_03155"
     CDS             complement(2451..>3241)
                     /locus_tag="QF480_03155"
                     /inference="COORDINATES: protein motif:HMM:NF023166.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF3298 domain-containing protein"
                     /protein_id="HJN05593.1"
                     /translation="SKHFCQSRTQQITYYHHFIIFESMNNYLHSEGKLVPDNNNSPIA
                     EIELTLIFPLDEYFQSGIVDSVKQIIAHSFFGDNFYEKNPDSMLTNFETEYFTNYKEQ
                     NEDWHSKGASFSWQKNVNMSVAFNSNYLVCLEYLKYAYSGGAHGMSNIAYDIINLNNG
                     TLLAYKDIFQEDTEDSLTSILTHKLRKDYKIPDDIPLKKAGFFVDEIVPNHNIYINGN
                     GIGFVYNSYEIAPYSSGQTNIFLEFDNVVGLLKKDTPVAMIATR"
BASE COUNT         1115 a          473 c          581 g         1072 t
ORIGIN      
        1 tatggtagtt ttaaacttaa tgaaatcgga gcacatgtta aaaacgtcaa actcacttca
       61 tacaacacat ctgttaactt gtatttccga aaagcatata attactatat aaaccttatt
      121 agtgatgata aagcagaaat cacatattca gcaactttgg gtgatttcac aacaaaaaag
      181 ttaccaggaa aagaaaaact taagcaggct gaatgtgtga ttggtgagcg tacaaaggct
      241 atacctatta caattgatat caaatctggt ttattgacct taaaaattaa ggattaattc
      301 ttgcacaaaa tgtgaccctt gaaatattag tttgtcctta agtgtaaata aatacataaa
      361 caattaattt aatcaaatga aaaatagaaa tatcataata atagtttcct ttttgtccgt
      421 aatcatttta tggaatacgg gatgtcgaaa gttccctttt ctcgaaggaa atggaaatgt
      481 aacaactgaa acaagaacca cggtctcttt taacaaaatt gaaaaccaag gtgaattcaa
      541 tgtatattat gtccacgata cagtttttcg ggttgtgatc aaagcagaat caaatctaat
      601 accttatatt agaactattg tgcatggaaa tacactggag attgatagtc gtgaaaatct
      661 taatccaaat gatgcaatga agatttgggt gcatacacca acgttagttg gagttaagtt
      721 aagtggttca ggattaatta atgcagaatc agttacggct gcaaacttcg aagttatatt
      781 gagtggatca ggatatgtgt acggagatgc tattactggc cacttcaaat ctactctgtc
      841 aggatcagga gaaattgatt tcgatttaaa ttctgaaatt acaagtgctg ttttaagtgg
      901 ttcaggaaga ataaaacttt caggcgaatc accaactgca gattatatta tttcgggttc
      961 aggaactatt gatgctgtta atttacagct caatgaatgt attgcaaaaa taagtggatc
     1021 tggaaatatt tacacaagcg taagcgatta ccttaatgta accatttcag gtagtggaaa
     1081 tctttattat tttggttatc ctgatataga tagtaatatt actggttcag gaagtgtaat
     1141 aagtaataac aaataatgaa aaaacttata ccagtaatat tactcacaat aactggattg
     1201 tttgctcact cccaaagctt tgaaagtcag ctaggagtta gacttggacc cacttcaggt
     1261 ataaccggaa agataataaa aaataaaaag acagctattg aaggtacctt aggttttcga
     1321 aaaggcggtg ttcaattata tgtgttactt gagtcatata aaatgttgaa taaaaacaca
     1381 aaacaaaact ggttcgtata ctttggcgga ggtgctcatg taggttatct taatggatat
     1441 aataaggttc gtagatggtc gaatactcaa ggttattatt gggaggaaga acatactctt
     1501 ggacctgtaa tagggcttga tggagttatg ggagtagagt ataatatacc gtcaataccg
     1561 ataacattgt tttttgagtt caaaccatta gttgagttac agtcgtttaa caagattcga
     1621 gctaattttt acgatacagg atttggaata gtatatagat tcaataataa attaaattaa
     1681 taaatatgaa aacatttaaa ttaatatcag taatttttgc attaataatt ggcttttcag
     1741 ccattgcaca agagaattca gaagaaatga aaactctgtt taagaggtct ggaacagaaa
     1801 agataagtaa tggaggttat ggatcgttta gtattggcta tacaagtatc gattcaaaag
     1861 atgctctgca attaggtgga agggtagcct ggattgcaaa tcatcgattt gctcttggcc
     1921 ttgcgggtta tggtttcgtt aataatcttc aaaagaatta taatagtaat gatgatcctt
     1981 ccaaatattt cttggcaggt ggatacggag gtatattttt tgaacccatt ttaatgccta
     2041 ataaacctgt tcatgtttct ttcccggtta ttctgtgtgt tggtggaata acagctgttg
     2101 aatcaaataa ctgggattat tctaacaata atcataacca aaactattac tacgactcag
     2161 atgctttttt agttttcgaa ccaggtgttg atgttgagtt taatattgtt aagtttttta
     2221 gaatagctct aggggcatcg tacagattaa caaataatgt aaatttgaca tataagtacc
     2281 ttgataataa ttatgatgaa catattgttc agatcgataa aaacgctcta aactcattca
     2341 attttcatat aggttttaaa tttggttggt tttagaataa ttcggcatta aaaatttata
     2401 ccaaattcag aggctcttgc ttgaaacaat tcaggtaaga gcctttttgt ttacctggtt
     2461 gctatcattg ctacaggagt atctttttta agcaatccaa ctacattatc aaattccaga
     2521 aaaatgttag tttggccact tgaataaggt gcaatttcat aactgttgta tacgaagcct
     2581 atcccattac cattaatata aatattatga tttggtacta tctcgtcgac aaaaaatccc
     2641 gcttttttta gtggaatatc atcaggtatc ttataatctt tgcgtagttt atgtgtaaga
     2701 attgaggtta atgaatcctc agtatcttct tgaaaaatat ctttgtaagc caataaagta
     2761 ccattattca ggttaataat atcatacgca atattactca ttccgtgagc tccacccgaa
     2821 taagcgtatt taagatattc taaacaaact aaataattag aattgaatgc aaccgacata
     2881 tttacgtttt tttgccagct aaatgaagcc cctttactgt gccaatcctc attttgttct
     2941 ttgtaatttg taaaatattc agtttcaaag ttagtcaaca ttgaatcggg attcttttca
     3001 taaaaattat caccaaaaaa actatgcgca ataatttgtt ttaccgagtc aactattcct
     3061 gattgaaaat attcatctaa aggaaaaatc agtgtaagtt caatttccgc gattggcgaa
     3121 ttattattat caggtactag tttgccctcc gaatgcagat aattattcat gctctcaaat
     3181 atgatgaaat ggtggtagta ggtgatctgc tgggtacgag actggcagaa atgtttcgag
     3241 a
//
LOCUS       DASCQP010000185         3507 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000718882, whole genome shotgun sequence.
ACCESSION   DASCQP010000185 DASCQP010000000
VERSION     DASCQP010000185.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3507)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3507)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3507
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000718882"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..542)
                     /locus_tag="QF480_03160"
     CDS             complement(<1..542)
                     /locus_tag="QF480_03160"
                     /inference="COORDINATES: protein motif:HMM:NF013126.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /protein_id="HJN05594.1"
                     /translation="MTAQYIQESHLQEEIWIDSIYNSLNLEERIAQLIFVRANYSGKP
                     YLNSVDTLISKYNIGGVVFFKGDPVAQVIKTNYWNSLSKIPLFVAIDAEWGLGMRLKN
                     SISYPLQMTLGAISNNNLIYRMGQQIGEQCKRMGIHINFAPVVDVNSNPKNPVIGMRS
                     FGQNPNIVAEKGNLYMLGMQ"
     gene            764..1612
                     /locus_tag="QF480_03165"
     CDS             764..1612
                     /locus_tag="QF480_03165"
                     /inference="COORDINATES: protein motif:HMM:NF012670.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HJN05595.1"
                     /translation="MSDIEKLKKIASQVRRDIIRMVHGVQSGHPGGSLGCTDFLTAMY
                     FDVMDYNAEVFTMDALNEDLLIVSNGHISPALYSVLARRGLFPIEELSTFRILESRLQ
                     GHPATQEELPGIRIATGSLGQGLSVSLGIALAKRLNKDPKIVFCLMGDGELEEGQVWE
                     AAMYIGSHKINNVVAVVDYNKKQIDGSTDDVLPLGDLKAKFEAFGWTVIEMNGNDIDD
                     VVKTMSLSKTLSAEGNPIIVLMHTEMGMGVDFMMGTHQWHGIPPNDKQLETALSQIEE
                     TLGDYS"
     gene            1701..3086
                     /locus_tag="QF480_03170"
     CDS             1701..3086
                     /locus_tag="QF480_03170"
                     /inference="COORDINATES: protein motif:HMM:NF012321.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HJN05596.1"
                     /translation="MKSRSTYIIILLLALLSFQLYAQHPEKEEEITKTTRILFVLDAS
                     RSMTGKWQGESKYTIARTILSEILDSLSTIENVEVALRMFGHTKHFPPQNCNDTRLEV
                     PFSKNNVDEIKARLRQLSPKGTSPIATSLLKSKDDFTECANCRNIVVLITDGLEECGG
                     DICEISALLQKEGIILKPFIIGIGHDTHEAYDCAGQYYNAADKEQFTKALNIIITKVL
                     SQTSLQVNLLDQYNRPTETNVNMTFISNSSGKIAYNLVHTLNSKGFPDTLNIDHLSEY
                     KVIVNTIPKRIINSVKLTEGKHTIISTSCPQGSLLVKLRGLTKADFNPAVVVKLPNNP
                     EPLNVQYLNEIVKYISGKYDIDILTLPISQLKDVSIEPDNQTKIEVANPGIAAIQKSI
                     KGFGSIYSLDGNDQFWIINFGSNFNQNESLYLQPGNYRLVFRSKYAAQSATTVEREFE
                     IKSEKTTRIKL"
     gene            3093..>3507
                     /locus_tag="QF480_03175"
     CDS             3093..>3507
                     /locus_tag="QF480_03175"
                     /inference="COORDINATES: protein motif:HMM:NF014798.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase family protein"
                     /protein_id="HJN05597.1"
                     /translation="MNKYSVIDIKDTRSGFGEALLELGNTNPKVVALVADLTGSLKMN
                     AFADAFPDRFFQMGIAEANMMGTAAGLTIGGYIPFTGTFANFSTGRVYDQIRQSIAYS
                     GKNVKICASHAGLTLGEDGATHQILEDIGLMKMLPG"
BASE COUNT         1223 a          554 c          649 g         1081 t
ORIGIN      
        1 ctctgcattc ctaacatata gagattacct ttttctgcta caatatttgg gttttgtcca
       61 aacgatcgca taccaattac aggattctta ggattgctat taacatctac aacaggggca
      121 aaatttatat gaattcccat acgtttacat tgctcgccaa tctgttgtcc cattctataa
      181 atcagattat tgttactaat ggcaccaaga gtcatttgaa gtggatatga aattgagttt
      241 ttcaaccgca tacccagtcc ccattctgcg tcaatagcca cgaacaatgg tatttttgat
      301 aaagaattcc aataatttgt tttaataacc tgagcaaccg gatctccttt aaaaaaaaca
      361 acacctccaa tattatattt agatatcaag gtatccactg aatttaaata tggttttccg
      421 gaataatttg cccgtacaaa aataagttgg gctatacgct cttctagatt taatgaatta
      481 taaattgaat caatccatat ttcctcttgc aaatgacttt cttgaatgta ctgtgctgtc
      541 atctgaaatg caaatacagt tacaaaaaaa acagctaata caatcttgtt tttggaaagc
      601 ttacggaata ttatcattat ttggagcgat ttaattacaa aattaatctt tttaataagt
      661 tgttaataaa tgattttcgg tgcgcatata aataatatta tttttacacg aaactatgat
      721 ttttagtcaa gcattctaat tatttgtata acaaagtgtt aatatgtcgg atattgaaaa
      781 actaaaaaaa attgcatcgc aagtaagaag agacatcata agaatggtac atggagttca
      841 gtcgggacat ccaggaggtt cgttaggctg tacagatttt ttaacagcca tgtattttga
      901 tgtaatggat tacaatgccg aagtattcac tatggatgct ttaaatgaag atttattaat
      961 tgtatctaac ggacatatta gcccggctct ttacagtgtt cttgctcgga gagggctatt
     1021 tcctattgag gaactttcta ctttcaggat attagaatcg agattacaag gtcaccctgc
     1081 tacacaagaa gaattaccag gaataagaat tgccacaggt tcgctaggac aaggtttatc
     1141 tgtttcactt ggtattgcgt tggcaaaacg actaaataag gatcccaaga ttgttttttg
     1201 tttaatggga gatggtgaac tagaagaagg acaggtttgg gaagctgcta tgtatattgg
     1261 atcacacaaa ataaataatg ttgtggctgt agttgattac aacaaaaagc aaattgatgg
     1321 ttctactgat gacgtgctac cacttggtga tttgaaagca aaatttgaag catttggatg
     1381 gactgtaata gaaatgaatg ggaatgatat tgacgatgtt gtcaaaacaa tgtccctttc
     1441 aaaaactcta tcagctgaag gaaatccaat aatagtttta atgcataccg aaatgggtat
     1501 gggtgttgat tttatgatgg gtactcacca atggcatgga attcctccaa atgataaaca
     1561 acttgaaaca gctttatctc aaattgaaga aactctaggt gactatagtt aataaaagtt
     1621 ttagttaatt tttctcagtt gggttaatta atactattat aaacggaaaa gagttaagaa
     1681 taaatagcaa ataagttttt ttgaaaagca ggtcaacata cataataatt ctactactag
     1741 cacttcttag ttttcaatta tatgcccagc atcctgagaa agaagaagaa ataacaaaaa
     1801 ctacaagaat tctatttgtc ctggatgctt cgagaagtat gacaggaaaa tggcagggtg
     1861 aaagcaagta tactattgct cgtacaatct tatcagagat attagatagc cttagtacaa
     1921 ttgagaacgt tgaagtagct ttaagaatgt ttgggcacac aaagcatttc cctcctcaaa
     1981 attgtaatga tactcgtttg gaagtgccgt ttagtaagaa caatgttgat gagattaaag
     2041 cacgacttag acaactatcc ccgaaaggta cctcaccaat cgcaacttct ttgttaaagt
     2101 caaaagatga ttttacagaa tgtgctaatt gtcgaaacat agtagtactt attactgatg
     2161 gtttagagga atgtggaggc gatatctgtg aaatcagtgc attattgcag aaagaaggaa
     2221 ttatcctcaa accatttatc attggtatag gtcatgacac acacgaagca tatgattgtg
     2281 caggccaata ttataatgca gctgataaag aacaatttac aaaggcctta aatattatta
     2341 ttacgaaagt ccttagtcaa acaagcttac aggttaattt attagaccaa tacaaccggc
     2401 cgactgagac caatgttaac atgactttta ttagtaacag ttcgggtaag attgcatata
     2461 acctggtaca tacattaaat agcaaaggat ttcctgatac tcttaatatt gatcacctta
     2521 gtgaatataa agttatagta aatacaattc caaagcgtat tattaattca gtaaaactaa
     2581 cggaggggaa acatacaata atttcaacat catgtccaca gggaagtctg ttagtaaaac
     2641 ttcggggttt aaccaaagct gattttaacc cagctgtagt tgtaaagttg cctaataatc
     2701 ctgaaccact taatgttcag tatttaaatg agattgttaa atatatttca gggaaatatg
     2761 atatagatat tctaacttta cctattagcc aattaaaaga cgttagtata gagccagaca
     2821 atcaaacaaa gattgaagtc gcgaacccag gtatagctgc tattcaaaag agcataaaag
     2881 gctttggaag tatttattca ttagatggta atgatcagtt ttggataatt aactttggta
     2941 gtaattttaa ccaaaacgag tccctatatt tgcagcccgg caattacaga ttagttttta
     3001 ggtcgaaata tgcagcacaa tctgcaacaa ctgttgaaag agaatttgag attaaatcag
     3061 aaaaaacaac ccgaataaaa ctttagctta taatgaataa gtatagcgta atagatatta
     3121 aagataccag atcaggattt ggagaagcat tattagagtt aggaaatacg aatccaaaag
     3181 ttgtggcact tgtggctgac ttaacaggat cgcttaaaat gaatgccttt gctgatgctt
     3241 ttcccgatag gttttttcag atgggtatag ccgaagcaaa tatgatggga acggctgccg
     3301 gtctaacaat tggaggatac ataccattta caggtacttt tgctaatttc tctaccggaa
     3361 gggtttatga tcaaattagg caatcaatcg catattcagg caaaaacgta aaaatatgcg
     3421 catcacatgc cggacttaca cttggcgaag atggagcaac tcatcaaatt ctggaagata
     3481 ttggtttaat gaagatgtta ccgggaa
//
LOCUS       DASCQP010000186         1724 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000727896, whole genome shotgun sequence.
ACCESSION   DASCQP010000186 DASCQP010000000
VERSION     DASCQP010000186.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1724)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1724)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1724
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000727896"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(68..256)
                     /locus_tag="QF480_03180"
     CDS             complement(68..256)
                     /locus_tag="QF480_03180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05598.1"
                     /translation="MSVRFKKHNVLTLLALVIMAISIAMFNTDDYSWTSNTKSYIGLI
                     IAGIVLIFTYTLRRKKLL"
     gene            404..928
                     /locus_tag="QF480_03185"
     CDS             404..928
                     /locus_tag="QF480_03185"
                     /inference="COORDINATES: protein motif:HMM:NF025292.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipocalin-like domain-containing protein"
                     /protein_id="HJN05599.1"
                     /translation="MVKHKYLSIRKLQIITFLFISMLLIGCNQELRKTPTDKFSGLWK
                     LVVIEQQDSISGEWNEYRNGLQGYILYDDKDNMAVHLTSKGYQNTDIRFHDFIDTVSI
                     EELKHRTQSYVYFAKYTVLEDENIVEHARISHSNPNLWNIKVQRLYEFKGDTLMLITL
                     ERKNSQLRVKWIKY"
     gene            complement(1040..1116)
                     /locus_tag="QF480_03190"
     tRNA            complement(1040..1116)
                     /locus_tag="QF480_03190"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1080..1082),aa:His,seq:gtg)
BASE COUNT          601 a          249 c          293 g          581 t
ORIGIN      
        1 caggacgtta ctgggccaag taaacaagcc ctgagcctta tctataccaa gcatttagtg
       61 ttaactacta cagtagcttc tttcttctta atgtataggt aaatattaaa actattcctg
      121 ctattatcag tccaatgtag cttttggtat tgctggtcca gctataatca tctgtattga
      181 acatcgctat cgaaatagcc attataacga gagcaagtaa tgttaaaacg ttgtgctttt
      241 tgaatcttac actcatgtta ttacattagg ttaatataca aatataaaac atatttgtga
      301 acgttctaac tccttaagat gatattgtta attttgaaga ttcaataaac ctaccaaata
      361 tagataggca aaaaattagt taattagccc aagatcgttt ataatggtta aacacaagta
      421 tttaagtata agaaaattac aaatcatcac atttctattt atctcaatgt tattgattgg
      481 ttgcaatcag gaattgagaa aaacacctac agataaattc agcggtttat ggaaactggt
      541 ggtcattgaa caacaagatt caatatcagg ggaatggaat gaatatagaa atggattaca
      601 aggttatatt ctatacgatg acaaggataa tatggcagtt catttaactt caaaaggata
      661 tcaaaatacc gatatcagat ttcatgattt tattgatact gtatcaattg aagaacttaa
      721 acatcgtaca cagtcttacg tttattttgc aaaatatact gttcttgaag atgaaaacat
      781 tgttgagcat gccagaatct cacattccaa tccaaattta tggaatatca aagtgcaacg
      841 actttatgaa tttaagggag atactttaat gctcattact ttagagagaa agaattcaca
      901 attgcgagta aagtggatta aatattagtg gctttgttaa ttgaaaaagc ccgataacca
      961 aaatgtgatt gggcttttta tttgctcata tatagtggta aataaaaaaa ggatgctgaa
     1021 ttaacaacat cctttttgtt ggggtggatg accggatttg aaccggcgac acctagaatc
     1081 acaatctagt actctaacca actgagctac acccaccatt tttgaggttg caaatatact
     1141 atatttttat tttttaaaat tatggattat taaaatattt gtaactaatc aggtctgttt
     1201 ttaatctaat tgtacttagg aaattcaaaa aatgaattcc accaaatccc ctcaaaggag
     1261 gggtgcaggg gtgggtcaga ttaaaaagtt tattcatttc tttgaatttc tgtttagtaa
     1321 ttaatgtacc taatcaatta agaaattgca gagcgaattt ccaacagtaa aatcagcaaa
     1381 tagttgtgcg ataaaggttt ccaatttgtt gcattatcaa tatgcatttc ggtaatttta
     1441 gttagacaaa gacgcagtta caacatacta tgtgttttat tgcttcttag aagggagtaa
     1501 aaaaggaata ggggaatagg ggtatagggg tagtaggggt agtaggggaa attgaatgat
     1561 ataaaagatg tctttcgcat tctgttacag aactttgcca tacaaaatta atgttttata
     1621 agaatctttc atatctatct tcaaatttat caattaattc tctttggatt gataaccagt
     1681 taaatgcttt tcttttccaa cttttttcat tgtgcattaa agct
//
LOCUS       DASCQP010000187         5768 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000731920, whole genome shotgun sequence.
ACCESSION   DASCQP010000187 DASCQP010000000
VERSION     DASCQP010000187.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 5768)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5768)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5768
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000731920"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..260
                     /locus_tag="QF480_03195"
     CDS             <1..260
                     /locus_tag="QF480_03195"
                     /inference="COORDINATES: protein motif:HMM:NF015709.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HAD family acid phosphatase"
                     /protein_id="HJN05600.1"
                     /translation="DIVTANHHIVFFMGDNLGDFMHVFDNKKIDERFSLTDKYKNEFG
                     NKFIVLPNPMYGSWANELINNNYNLSKKEKIDLLKKQLVDF"
     gene            complement(300..2078)
                     /gene="sppA"
                     /locus_tag="QF480_03200"
     CDS             complement(300..2078)
                     /gene="sppA"
                     /locus_tag="QF480_03200"
                     /inference="COORDINATES: protein motif:HMM:TIGR00705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptide peptidase SppA"
                     /protein_id="HJN05601.1"
                     /translation="MKQFFKFMFASFVGTILTFIVIFLMFAVMIASLVAMSGDEDVRV
                     KDHSVLHITWKTEIKDRSSDNPMEGFDFATMKTHKPIGLYNILRTIEKASKDSRIDGI
                     FLDMETLPAGLATSEEIRNKLLEFKESGKFIVSYANSYDQKAYYLASLADEIYLNAEG
                     MLLFKGLSAQLMFFKGLLDKLDIEMQIVRGPDNKYKSAVEPLMRNHISEANREQMQVL
                     LNSIWGKFIAAISDSRGISIDELNEIADKLELTTAEKAVEHKFVDGAVYRDEVIRILK
                     EKTGQKEDDKINSVSFGNYTKAKVKETRGLKRNKLAIVYAEGAIVQGNSGDQNMGSAT
                     IAKAIRAASKDKNVKAIVLRVNSPGGDALASEIIRHEVEVAGKKMPVIVSMGNLAASG
                     GYWISTNADYIFAQPTTITGSIGVFGIIPNFEGFFNKKLGINMDNVMTNDNSDFIDVM
                     KPLSPFQHTKLNEMVNKIYTDFTELVANTRHLDISYVDSIAKGRVWAGIDALGLGLID
                     EFGGLDDAIAYAAEKAELGDNYRISTYPKRKGFLDQLIDELTGQARQNIVKYELGEYY
                     TYYQKIQSLKNMKGVQARLPFFMNVN"
     gene            2204..2935
                     /locus_tag="QF480_03205"
     CDS             2204..2935
                     /locus_tag="QF480_03205"
                     /inference="COORDINATES: protein motif:HMM:NF013954.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosaminidase domain-containing protein"
                     /protein_id="HJN05602.1"
                     /translation="MNANILILNKKLLLTFVLILFSVGSYTFSEITATSFQTEKSTES
                     NLVFMKSTNYNFPIYYLTPASYLIKSSEEIVELKTPSERIMDKGKITSGTLANFLKNN
                     NQNIDFLYIQNIADLYLEEAKLEGVNPDIAFAQMCLETGFLRFDGTVDKQQNNFCGLG
                     VIGNGVKGLAFKDARQGVRAHIQHIKAYASTKDLNNKLVDTRFKFVKRGSGKYISELT
                     GKWATDSKYDKKIRSLLDRLYKFSE"
     gene            3163..3654
                     /gene="folK"
                     /locus_tag="QF480_03210"
     CDS             3163..3654
                     /gene="folK"
                     /locus_tag="QF480_03210"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR01498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003848 -
                     2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
                     diphosphokinase activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HJN05603.1"
                     /translation="MIFLLLGSNIERRAEYLAKEEKKITGSIGNLVKRSKIYESEPNG
                     FNADQHFLNRILILSSKLSGIEALNQILIIEQELGRKRSNGGYSSRTIDIDILYMNKE
                     IIKTNVLTVPHPRLHERNFTLIPLTEIAPDFIHPILNLDSKKLLEVCSDNSEVVVFNT
                     TSI"
     gene            3656..4288
                     /locus_tag="QF480_03215"
     CDS             3656..4288
                     /locus_tag="QF480_03215"
                     /inference="COORDINATES: protein motif:HMM:NF013843.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxynucleoside kinase"
                     /protein_id="HJN05604.1"
                     /translation="MRYNFIAIEGNIGAGKTSLANLISNDFNAKLILEQFEDNAFLSK
                     FYEEPDKYAFPLEMSFLASRFQQLKDQLGPQDLFKSFTISDYYIIKSLIFAQKTLAED
                     EFTLYTRFFNIIFQQLPRPDLLVYLHMEISKLQENIKIRGRTYEQKIEYKYLEKIQEG
                     YFDFIKQQSKFPILVIDINNCDFVQNPDDYRKIVSEINKEYMPGVHRILL"
     gene            complement(4448..>5768)
                     /locus_tag="QF480_03220"
     CDS             complement(4448..>5768)
                     /locus_tag="QF480_03220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05605.1"
                     /translation="VAPERKIDDGVIHTSQLLRNTALLAFALDAYEKVTISTQQSELY
                     FRVNRSALNWKLPLNKDEENYNALKNNMADMEMGWLLDNITIDGWASPEGEETFNEGL
                     SERRAQTALKYMEKKITKAAKKNELIAEEGIDFVLTSNGPDWNGFMKAVKGSDIKDKS
                     AILNVINSADQTKKEEEIRNMILIYPEIERDILPPLRRADINVNTFMPKKTDAEIAEL
                     STSNPGSLDIEELFYAATLTEDNGTKKVIYGSIIEFYPKCWRSVNNAAAVELAEGNYE
                     IAHDLLMKGAEMNENSFEVQNNIGIYNMMVGEYPKAELSFYKAQDLGGDENYNLGLVN
                     IALGDYGKAVTFLSGASCDFNLGLAQLLNGNANAAEKTFKCAPQDAETLYLLAITAAR
                     QDNKSNMLNYLGQSIKADPEVAGLAASNLEFKDYYNDADFKALVNSN"
BASE COUNT         1898 a         1043 c          889 g         1938 t
ORIGIN      
        1 gggatattgt tacggcaaat catcatatag tattctttat gggtgataat cttggtgatt
       61 ttatgcatgt ttttgataac aaaaagattg atgaacgatt ttctttaacc gataaatata
      121 aaaatgaatt tggtaataaa tttattgtat taccaaatcc aatgtatgga agttgggcaa
      181 atgaactaat caacaataat tataatcttt cgaaaaaaga aaagatcgac cttcttaaaa
      241 aacagctagt tgatttttaa tctatttcgt tttactgaat cttagtgaat tgaaatagat
      301 taattcacat tcataaagaa tggcaatctg gcttgtacac ccttcatatt ttttagactt
      361 tgtatctttt gataataagt ataatattca cccagttcat actttacaat attttgcctt
      421 gcttgacctg ttaactcatc tataagttga tctaagaatc cttttctttt gggataggta
      481 gagatgcggt agttatcacc aagttcagct ttctcagcag cataggcaat tgcatcatca
      541 agaccaccaa attcgtctat caatcctaat ccaagtgcat caataccagc ccaaacacgg
      601 cctttagcaa tgctatcaac ataggatata tcaagatgtc gggtatttgc aactaattcc
      661 gtaaaatcag tataaatctt atttaccatc tcattgagct tagtatgttg gaaaggacta
      721 agcggtttca taacatcgat aaaatccgag ttgtcattag tcataacatt atccatatta
      781 atgcccagtt ttttgttaaa aaaaccttca aaatttggaa taatcccaaa cactccaatt
      841 gaacctgtaa ttgtagtggg ttgagcaaat atataatcag cattggtaga aatccaataa
      901 ccacctgatg cagcaagatt acccatggaa acgataaccg gcattttctt accagcaacc
      961 tcaacctcat gccttatgat ttctgatgca agtgcatctc ccccgggtga gttaactcgt
     1021 agtacaattg cttttacatt tttatcttta cttgcagcac gaatagcttt tgcaatggtt
     1081 gccgatccca tattttgatc accactatta ccctgaacaa tagcaccttc tgcataaaca
     1141 attgctagtt tatttctttt cagcccccta gtttctttta ctttggcttt tgtataatta
     1201 ccaaaagaaa cagaatttat cttatcgtct tctttttggc ctgttttttc tttcaatatt
     1261 ctaattactt catcacggta aacagcacca tcaacaaatt tatgttcaac agctttttcg
     1321 gcagttgtga gctcaagttt atcagcaatt tcattaagct catcaatact tattcccctg
     1381 ctatctgaaa ttgctgcaat gaattttccc caaatcgagt taagcaacac ttgcatttgt
     1441 tcacgatttg cctcacttat atgattacgc attaatggtt caacagcact tttgtattta
     1501 ttatcaggtc cccttactat ctgcatttca atatccaact tatctaacaa tcctttaaaa
     1561 aacataagct gtgcactaag ccctttgaag aggagcatgc cttctgcatt aagataaatt
     1621 tcatcagcaa gacttgccag ataatatgct ttttgatcgt aactatttgc atagctaaca
     1681 ataaattttc ccgactcttt gaattccagt agtttatttc taatctcttc agatgtggca
     1741 agacctgcgg gtaaagtttc catatccaga aaaataccat caattcttga atcttttgaa
     1801 gctttctcta ttgtgcgaag aatattgtac aagccaattg gcttatgcgt tttcattgtg
     1861 gcaaaatcaa atccctccat aggattatca gaagatctgt ctttaatctc cgttttccat
     1921 gttatatgca atacagaatg atctttaact ctgacatcct catcgccaga catggccact
     1981 aatgaagcga tcattactgc aaacatcaaa aaaatgacaa taaaggtaag tattgtacct
     2041 acaaaagagg caaacataaa tttgaaaaac tgtttcatga caattaattt atatgataat
     2101 tcgaaagtac aatattaaca aataactgtg aataaaaaaa ctgaaaactg ggattatatc
     2161 acggtttcat ttggatattt atattatgct aaaattccga gtcgtgaatg ctaacatact
     2221 gattcttaat aagaaattat tactcacctt tgtgctaata ttatttagtg ttggttcata
     2281 cacgttctca gagatcacag caacttcttt ccaaacagaa aaaagtactg aatccaatct
     2341 ggtatttatg aaatcaacta actataattt tccaatatat tatttaacac ctgcatctta
     2401 tttaattaaa agttctgaag aaatagttga attaaagaca ccttcagaga ggataatgga
     2461 taagggtaaa ataacatcag gtactcttgc aaatttctta aaaaataata atcaaaatat
     2521 tgatttctta tacattcaaa atatcgcaga tttatatctg gaagaggcta aactggaagg
     2581 agtaaatcct gatatagcat ttgcacagat gtgtttagaa actggtttcc ttcgatttga
     2641 tgggacagta gataaacagc agaataattt ttgtggactt ggtgttattg gcaatggcgt
     2701 taaaggatta gcgtttaaag atgctcgtca aggcgtaagg gctcatatac agcacattaa
     2761 ggcttatgct tctaccaagg atctcaataa taaacttgta gataccagat tcaaatttgt
     2821 taaaagaggc agcggaaaat atattagtga acttaccgga aaatgggcta ccgatagcaa
     2881 atatgacaag aagattagaa gcctactgga tcgactatac aagttctctg aataaattat
     2941 aatcgaaaac tctcaattta ttttactgtt acaataaact tcacaacttc tgttcatatt
     3001 taactttggt gtaaaacagt ctcttgaagt ttggttatag gaaaactttc tgtgactatt
     3061 aatgctattt attacacatt gtaaaatttc aacttaacac ctgtagcata gcctagattt
     3121 actaaatttg ctttgcgtta taatagtagt aattaagtga aaatgatatt tttattgtta
     3181 ggaagtaata ttgaacgacg agcagagtat cttgctaaag aagagaaaaa aattactgga
     3241 tcgataggta atttagttaa acgttctaaa atttatgaat cagaaccaaa tggatttaat
     3301 gcagatcaac attttcttaa ccgtatatta atactttcga gcaaactttc tggcatagaa
     3361 gccctaaacc aaatacttat tatcgaacag gagttaggca ggaaaagatc aaatggaggg
     3421 tattcatctc ggacaatcga tatcgacatc ctttatatga acaaagaaat aatcaaaaca
     3481 aacgtactaa ctgttcctca tccaaggtta catgaacgta attttacact tatacctttg
     3541 actgaaattg ctcctgattt tattcatcct atccttaatt tagatagtaa aaaactgctt
     3601 gaggtttgct cagataattc tgaagttgtt gttttcaata ctactagcat ttgagatgag
     3661 gtataatttc atagccatag aaggaaatat aggtgctgga aaaacatcgc tagctaacct
     3721 tatatcgaat gattttaatg caaaactcat actcgaacag tttgaggata atgcattctt
     3781 atcaaaattc tatgaggagc ccgataaata tgcttttcca ctggaaatgt cattccttgc
     3841 ttctagattt caacaattaa aggatcaact tggcccacag gatttattca aatcgtttac
     3901 tattagtgat tattatataa ttaaatctct aatttttgct caaaaaacac ttgctgaaga
     3961 cgagttcaca ctttatacac gtttctttaa tattattttt caacagttac ctcgtcctga
     4021 tttactcgtc tatttgcaca tggagatatc caaacttcag gaaaacatca aaataagagg
     4081 caggacatat gagcaaaaaa ttgaatataa atatttggaa aagattcagg aagggtattt
     4141 cgattttata aaacaacaaa gtaaatttcc gatattagtt attgatatta acaactgtga
     4201 ttttgttcaa aatcctgatg attatcgaaa aattgtatct gaaattaaca aagagtacat
     4261 gcctggagta catcgcatat tactttagta tttttaattc tcaaacaata ctttacccct
     4321 aacctgttca tatttcatta cctattgctg cagtgagata tcattaacta aggtagcact
     4381 actgaaaata catcacaaaa aaaagtcccg attttcatcg ggacttttca cataaaagtt
     4441 cttaatacta attactattc acaagtgctt tgaaatcagc atcattataa tagtccttga
     4501 attctaggtt ggaagcagct agtccagcta cttcagggtc agcttttatc gactgtccta
     4561 ggtagtttag catattggat ttattatcct gacgagcagc tgttatagca agtaagtata
     4621 atgtttcagc atcctgagga gcacatttga atgtcttctc agcagcgttt gcgttcccat
     4681 ttagcaattg tgcaagacca agattaaagt cacaagaagc tcctgaaagg aaagtaacgg
     4741 cttttccgta gtcacctaac gctatattaa caagaccaag gttgtaattt tcatcaccac
     4801 caagatcctg agctttgtag aaacttagtt cggctttagg atattcgcca accatcatat
     4861 tataaattcc tatattattc tgaacttcaa atgaattttc attcatttca gcacctttca
     4921 taagtagatc atgagctatt tcataattac cttcggccaa ttcgactgca gcagcgttat
     4981 ttaccgatct ccaacattta ggatagaact caataataga accgtaaatt acttttttag
     5041 tgccattgtc ttcagtaagc gttgcagcat agaaaagttc ttctatatca agggatccag
     5101 gatttgaagt tgaaagttct gcaatttcag catctgtttt ctttggcata aatgtattaa
     5161 cattaatatc agcacgcctt agtggaggga gaatatcacg ctcaatttca ggataaatta
     5221 gaatcatatt cctgatttct tcctctttct ttgtttgatc ggctgagtta ataacattta
     5281 gtatagcact cttatctttt atatctgaac ctttaacagc cttcataaat ccattccaat
     5341 caggtccatt tgatgtcaga acaaaatcaa ttccttcttc agcaattagt tcattcttct
     5401 tagcagcttt tgtgattttt ttctccatat atttcaacgc tgtttgagca cggcgttccg
     5461 aaagtccttc gttgaatgtt tcttcacctt caggagaagc ccaaccatca atggtaatgt
     5521 tatctaacaa ccatcccatt tccatatccg ccatgttatt cttaagtgca ttatagtttt
     5581 cttcatcctt attaagagga agcttccagt ttaatgctga gcggttaacc ctaaagtaca
     5641 attctgattg ttgagtactg atggtaactt tttcgtatgc atcaagtgca aaagctaaca
     5701 gtgcagtatt acgtaataat tgagatgtgt gaattacacc gtcatcaatt tttctttcag
     5761 gagcaaca
//
LOCUS       DASCQP010000188         1648 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000733219, whole genome shotgun sequence.
ACCESSION   DASCQP010000188 DASCQP010000000
VERSION     DASCQP010000188.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1648)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1648)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1648
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000733219"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(54..140)
                     /locus_tag="QF480_03225"
     tRNA            complement(54..140)
                     /locus_tag="QF480_03225"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(104..106),aa:Ser,seq:gct)
     gene            347..>1648
                     /locus_tag="QF480_03230"
     CDS             347..>1648
                     /locus_tag="QF480_03230"
                     /inference="COORDINATES: protein motif:HMM:NF001614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HJN05606.1"
                     /translation="MNNRTFAEKIFNTSAGSIVFKKPDIILTHDNTASIFATFKKMGG
                     QKVKFPEQLLIVLDHNAPPTTAKLANQYQAIRDIVKEQGVGKFYDAGKGICHQIMSEH
                     ALPGMVIVGSDSHTCTAGAFNSFAAGIDRTEAAGLWVQGETWFRVPESIKITLNGSLN
                     SGVYAKDISLWIIGMIGSSGADYMSIEYHGDGVQTLSIDQRMTLANLASEMGAKNAVF
                     PCDSVLKDWLDDDVEGVWADENANYTREIEIDLSKIFPLVAAPHHVDNVKAVSEVEGI
                     DLQQAMIGTCTNGRFEDLQIVANILKAKKLPEGFQMVMVPASQKIYLKAMKEGLIEIF
                     LEAGANVLSASCGPCLGTGQGIPADGYNVISTANRNFKGRMGNKESFVYLASPATVAY
                     SALAGKIVDPRGGLANDSFPFSLEQTNIVSIDDSDDRRTNGS"
BASE COUNT          529 a          283 c          361 g          475 t
ORIGIN      
        1 accataagat cagcgtttta cggtggtttg cgttataata cttatgtaaa aagcggaggg
       61 ggggggattc gaacccccgg tacccttgca ggtacgccag tttagcaaac tggtggatta
      121 agccactctc ccacctctcc ttattttata gaggattaag cctcccgata gttatcggga
      181 ctcgaacctc tcctaaaatc gtgtgcaaaa ataattatta gttttaattc tgcaataaaa
      241 tttctatata atatcaagaa caaataaact ttaaaagtaa atttgcttta tgaactacaa
      301 caccatttgt tgtataatat atcttgtata ctaaagaaca atttaaatga ataatagaac
      361 ctttgccgaa aaaatattta atacctcagc cggtagtata gtttttaaaa aacctgatat
      421 cattcttaca catgataata cagctagtat tttcgcaaca tttaaaaaaa tgggaggaca
      481 aaaagttaag ttccctgaac agttgttaat tgtactcgac cataatgctc ctcctactac
      541 agcaaaacta gctaaccagt accaggcaat acgcgatatc gttaaagaac aaggggttgg
      601 taaattttat gatgccggta aggggatttg tcatcaaata atgtcagaac atgccctacc
      661 ggggatggtt attgttggta gtgacagcca tacttgtaca gctggagcat ttaattcttt
      721 tgcagcaggt atcgatcgaa ctgaagctgc cggattatgg gttcagggtg aaacatggtt
      781 tcgggtgcca gagagtatta agattactct taacggaagt cttaacagtg gggtttatgc
      841 taaagatatt tcattgtgga taattggaat gattggctcc agtggtgctg attacatgtc
      901 aattgagtat catggtgatg gagtacaaac attatcaata gatcaacgta tgacactggc
      961 taatcttgca tccgagatgg gtgctaaaaa cgctgtattt ccatgtgata gtgttcttaa
     1021 ggattggctt gatgatgatg tggaaggtgt ttgggccgat gaaaatgcca actatacaag
     1081 agaaatagaa atagatctta gcaaaatttt cccactagtg gcagctccgc accatgttga
     1141 taatgttaaa gcagtttccg aagtagaggg aattgacctt caacaggcaa tgataggtac
     1201 atgtacgaac ggacgttttg aggatttgca aattgttgca aatatattaa aggctaaaaa
     1261 actgcccgaa ggttttcaga tggtaatggt gcctgcatct caaaagatat atttaaaggc
     1321 aatgaaagaa ggtttgatag aaatatttct agaagctggg gctaacgttc tatcagcctc
     1381 atgtggacct tgcctgggaa cagggcaggg gatacctgca gatggttaca atgttatttc
     1441 aacggcaaac aggaacttca aaggaagaat gggaaacaaa gaatcattcg tatacctcgc
     1501 ttcgcctgca actgttgctt attcggcatt agccggaaaa attgtagatc caaggggtgg
     1561 tttagcaaac gatagttttc ctttctctct cgaacaaaca aatatagtca gtattgatga
     1621 ttcggatgat aggagaacca acggtagc
//
LOCUS       DASCQP010000189         1938 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000733557, whole genome shotgun sequence.
ACCESSION   DASCQP010000189 DASCQP010000000
VERSION     DASCQP010000189.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1938)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1938)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1938
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000733557"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..671)
                     /locus_tag="QF480_03235"
     CDS             complement(<1..671)
                     /locus_tag="QF480_03235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05607.1"
                     /translation="MKSIKTKSRTYSNYIFKEMYLSRIAIFIVAITFIIASCKKFETV
                     ETPTANSNYQPTLMRDLVVSSNFDWKLFQTVDVNVVIPEGKELKPIKISSLDGKKVYF
                     KGYSEDGSNNIVTLVTIPTHVDMVLVQYANGSNYDPVIVPIMNNTLSYNFNSNMKMGG
                     RSMDPECCDGKVTWLKLQYTDADAIYIEVDGHGPGNNNLFTGNIVQGQVFTIYGNDNH
                     NTLGS"
     gene            1040..1723
                     /locus_tag="QF480_03240"
     CDS             1040..1723
                     /locus_tag="QF480_03240"
                     /inference="COORDINATES: protein motif:HMM:NF016107.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HJN05608.1"
                     /translation="MKIFERQIWHLLALLFLIAGIITIIQLDTDILAGSLWNIKTSIW
                     LILSLATPVIHQVYVLLCWRLELHNRLLSRKLGQNVFRLYTVGFFILFIGRIIFIILL
                     AASNKNTYYIDPLLKYSISGIIAIIASYAFYSVARYFGMDRAAGKDHFDSDIAKLPFV
                     KKGIFRYTNNGMYTYAFLIIYLPAILYQSQAALLAALFSHIYIWVHYYCTELPDIKTI
                     YGTESQKTR"
BASE COUNT          646 a          306 c          305 g          681 t
ORIGIN      
        1 tttgagccaa gagtgttatg gttgtcgtta ccataaatag taaatacctg cccctgaaca
       61 atatttccag taaacaagtt attattgcct ggcccatgtc catcaacttc tatataaatt
      121 gcatcggcat ctgtgtattg taatttaagc catgtaacct taccatcgca acattcagga
      181 tccattgacc tgccacccat tttcatgttt gagttaaagt tatagctcaa tgtattattc
      241 attatgggaa caatgacagg atcataatta gaaccattag catactgaac tagtaccatg
      301 tctacatgtg taggaatggt tacaagtgta actatattgt tcgacccatc ctcagaatat
      361 cctttaaaat aaaccttctt accatcaaga gagctaattt taataggttt taattcctta
      421 ccttctggga ttactacgtt tacatcaact gtttgaaaca atttccaatc aaagttactg
      481 cttaccacaa ggtctctcat aagagtaggt tggtagtttg agttagcagt aggtgtttca
      541 accgtttcaa atttcttaca gctagcaata ataaaagtga ttgcaacgat aaatattgca
      601 attctgctta gatacatttc tttgaagatg tagttactgt aagttctgct tttagtttta
      661 atagatttca tgacagcatt tttaaattaa tagtcttaaa tcaattagca ttggtatgtc
      721 aagagtcgtg ccacaaattg aactaagtca ttaacacttg atattcagat atatacaaaa
      781 gattaaaatt gagaatattt cccatcatgg gtcattacgt tctttatatg gaattatgtc
      841 atattgggaa ttactatatt aggtatttca tattaaaact tgttattact caagaaagat
      901 gagagttgag cttatgttat ttgtagttta tgtatatcat ttaattccgg atctttctgt
      961 catgtaacta tgttggtgaa ttctatttga ttatatagtg tatctttata cttgcaatta
     1021 gtgaaacaaa tagaaaatat tgaaaatatt tgaaagacag atttggcacc tattagcatt
     1081 actcttttta atagcgggga ttataactat tattcaactt gatacagata tattagcagg
     1141 aagcctttgg aatatcaaaa ctagtatatg gttaatcctt tcgctcgcga ctcctgtaat
     1201 acatcaagta tacgtactcc tatgctggag gctagaactc cacaatagac ttttatcccg
     1261 aaaactgggt caaaatgtct ttaggcttta tactgttggg tttttcattc tttttatagg
     1321 gcgaattatt ttcataatac ttttggcagc ttcaaataaa aacacatact atattgatcc
     1381 gcttcttaag tattccattt caggaattat cgcaataata gcttcgtatg cattttactc
     1441 tgtagctaga tattttggaa tggacagagc tgctggtaaa gatcattttg attcggatat
     1501 tgcaaaatta ccttttgtaa aaaaaggaat tttcaggtac actaataatg ggatgtatac
     1561 atatgcgttt ttgattatct atttacctgc aatactatat caatcacaag ctgctttatt
     1621 ggctgcactt tttagccata tttatatttg ggtacattat tactgtactg aactaccaga
     1681 cataaaaacg atatatggta ctgaatctca aaagactaga taagtttagc aaaccaatct
     1741 agttacaatc tcattcaatt agatccagaa aaaagaggat taacttttta aaacaaataa
     1801 aaaggaagct cagaaatagg gtatttgaaa attctttata gcaaaaattg tactaaacca
     1861 atgtacatcg atcgacataa tcaagtcgaa tgtaaataag gaaaaagtgg taatatctaa
     1921 taactttata gattatta
//
LOCUS       DASCQP010000190         3065 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000734275, whole genome shotgun sequence.
ACCESSION   DASCQP010000190 DASCQP010000000
VERSION     DASCQP010000190.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3065)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3065)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3065
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000734275"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            229..1194
                     /locus_tag="QF480_03245"
     CDS             229..1194
                     /locus_tag="QF480_03245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009597674.1"
                     /note="This family includes YhcC from E. coli K-12, an
                     uncharacterized radical SAM protein; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01212 family radical SAM protein"
                     /protein_id="HJN05609.1"
                     /translation="MMDNSNYVWGHNRRYNAYAQYFKKLFDERVQKISVDAGFSCPNR
                     EEERINGGCTYCNNLAFNPSYCNPSKPIDQQILEGIEFHKVRYRRAKNYLVYFQPYSN
                     TYAPLDKLKKLYESALKQPGVVGLVIGTRPDCIDDNKLEYLQQLSRKYYIIIEYGVES
                     IYNSSLTRINRGHTYEQSVDAIMKTATHGINVGAHFIFGLPGESRRMMMDSVVEISKL
                     PLTTIKFHQLQIVKDTVMEKDFKINPSNYKLFSFEDYINFIVNFTERLNPAFIIERFA
                     GEVPPRYIAGPDWGLIRNDQINIAIEKELEQRDSWQGKYYTTLGF"
     gene            complement(1259..1336)
                     /locus_tag="QF480_03250"
     tRNA            complement(1259..1336)
                     /locus_tag="QF480_03250"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1299..1301),aa:Val,seq:tac)
     gene            1563..>3065
                     /locus_tag="QF480_03255"
     CDS             1563..>3065
                     /locus_tag="QF480_03255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05610.1"
                     /translation="MTLITLLIGLSSCNVKKHLDKDQYLLNRYKIEIEGKHAEISSSE
                     LKTLLSPDPNSKFLFSRFKLWVHYRLIKKKSKFNIWLNKHFGEDPVLYDEKSIVNITR
                     KMGLYLNNIGFINSSIEHKTEFGNKVANVKFIIKPAEPYRIKEINYDIRDSLLSSFFY
                     QNIENTLIKKNDIYNAYTFDDERDRITDDLRNTGYYYFNRNYIQYVVDSNFMKHQMKV
                     NLVINDVKKQDKDTPGEFTEENHRRYFINNVTVIPEFNPLNKSKFDTTFHTINFWNDT
                     NNYTYYFLNNSKKHLLPSAFNSALKIKPGQVYSAKKVQTTYRKLFNFLIIQTAHISFD
                     TANTPKSNLPNHHYLNSRIQLKDSKLNRFSTEVEGTNSSGDLGIRGNLVFLNKNFFKR
                     AEVLRIRLKGGVEAQTISEPTDNSSGLFNTFETGIDGTIFFPRFLSPIRLHRFNQMYM
                     PNTNLNFGFNYQRRPYYSRNISNIDIGYIWHVKKSINNILTPVNINYVNIN"
BASE COUNT         1107 a          507 c          486 g          965 t
ORIGIN      
        1 ggaaacggac ttttatttat tggtgctata ctttatgatt caattccaat ttggatgact
       61 tggggtattt ttgttatagc tactgctatt tctatgctca ctattctgtt tatgattaaa
      121 tggcttgaaa gagttgctaa ataagcaata aacaaaaact tatgaaggga tgtttcgtaa
      181 agattcatcc ctttttttta tttactagtt ttgccgatat actatcgtat gatggacaat
      241 tcaaattatg tttggggaca caatagacgc tataatgctt atgctcagta tttcaagaaa
      301 ctatttgacg aaagagttca aaaaataagc gttgatgctg gattttcctg tccaaatagg
      361 gaagaagaaa gaatcaatgg tggatgcact tattgtaata atttagcatt taacccatcc
      421 tattgtaatc cctcaaaacc aattgatcag caaatactag aaggcattga attccacaaa
      481 gtgaggtacc gccgggctaa aaattacttg gtttatttcc aaccttactc aaatacatat
      541 gcacctttag acaaacttaa gaaactctat gaaagtgctt taaaacaacc aggtgttgtt
      601 ggccttgtta ttggtactcg acctgattgt attgatgata acaagctaga atatttgcaa
      661 caactctcaa gaaaatatta cataattatt gaatatggag ttgaaagcat ttacaatagt
      721 tctctaacaa gaataaatag aggtcataca tacgaacaat cagttgatgc aattatgaag
      781 actgccactc acggcatcaa tgttggagca cacttcattt ttggccttcc aggagaaagt
      841 cgaagaatga tgatggattc tgttgttgaa atctcaaaac tgccacttac aactataaag
      901 tttcaccaac ttcagattgt taaagacacg gttatggaga aagatttcaa aattaaccca
      961 agtaattata aattattctc ttttgaggat tatattaact tcattgtaaa ttttacagaa
     1021 agattaaatc cggcattcat tattgaaaga tttgccggag aagttcctcc aagatatatt
     1081 gccggaccag actggggact tattagaaac gatcaaatta atattgccat tgaaaaggag
     1141 ttggaacaaa gagatagttg gcaggggaag tattatacta cattaggatt ctaaagtaga
     1201 tttattggaa atctaatgtt agtcccttaa aaataaaaac ctgccgttgg caggtttatg
     1261 gtgggcgatg agggattcga acccccggcc ccctcggtgt aaacgaggtg ctctgaacca
     1321 gctgagctaa tcaccctttt ggtgctctga cctcccgata aatatcagga gagctaatca
     1381 ccctgaatag cgctttttaa aaacgagtgc aaatatacac ctattttaat ttgacataca
     1441 aaaaattgta aaaatttgcc cgatgcgcta aaataattct gacaaacaaa ttatcttctc
     1501 ttttgctaca tttgcagctt catacacatt acaatttgag atcttataaa aatataatat
     1561 ggatgacact aatcacattg ttgattggat tatctagttg caatgttaaa aaacatcttg
     1621 ataaggatca atacctgttg aaccgatata aaatcgaaat tgaaggaaaa catgcagaaa
     1681 taagttcctc agaactaaaa acattactaa gtcctgatcc taacagtaag ttcttgtttt
     1741 cacgatttaa gctttgggtg cattatcgtt tgatcaagaa gaagtcaaaa tttaatattt
     1801 ggctcaataa acattttggc gaagaccctg ttttatatga tgaaaaatca attgttaaca
     1861 taacaagaaa aatgggttta tatcttaaca atattggatt cataaattcc tcaattgaac
     1921 ataaaacaga attcgggaat aaagtggcaa atgtgaaatt tatcattaaa cctgcagaac
     1981 catatcgcat taaggaaatt aattatgata tacgcgattc tttattaagc agtttctttt
     2041 atcaaaatat agaaaacaca cttattaaaa aaaatgatat ttacaatgcc tatacttttg
     2101 acgatgaaag agatagaatt actgacgact taagaaatac tggatattat tattttaaca
     2161 gaaattatat tcaatatgtt gttgatagta attttatgaa acatcaaatg aaagtgaacc
     2221 tggtaattaa cgatgtaaaa aaacaagata aagacacacc tggagaattt actgaagaaa
     2281 accatcgtag gtattttata aataatgtaa ctgttatacc agagtttaat cctttaaaca
     2341 aaagcaaatt cgacactaca tttcatacta tcaacttttg gaatgatact aataactata
     2401 catattactt tcttaacaac agtaagaaac acctattacc ttctgccttt aattcagcat
     2461 taaaaattaa acccggccaa gtatattctg caaaaaaagt tcaaaccact tatagaaaat
     2521 tattcaattt tctaataatt caaacagcac atattagttt cgatactgca aatactccta
     2581 aaagcaacct gccaaatcat cattacttaa actcacgcat tcaattaaaa gacagcaaac
     2641 taaatcgttt ttccacagaa gttgaaggaa cgaattccag tggtgatctg ggtataagag
     2701 ggaatctggt ttttctaaat aagaacttct ttaaacgagc agaagtatta cgtattcgac
     2761 tcaaaggtgg tgttgaagct caaactatca gtgaaccaac cgacaactcc agtggtttat
     2821 ttaacacctt tgaaacagga attgatggta caattttctt tcctcgattc ctatctccca
     2881 taaggctcca tcgttttaac caaatgtata tgcctaatac aaatttaaat tttggtttca
     2941 attatcagcg tcgaccatat tattctcgca acatctcaaa tattgatatt ggatacatct
     3001 ggcatgttaa gaaaagtatt aataatatcc ttacacctgt taatatcaat tacgtaaata
     3061 ttaat
//
LOCUS       DASCQP010000191         2065 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000734303, whole genome shotgun sequence.
ACCESSION   DASCQP010000191 DASCQP010000000
VERSION     DASCQP010000191.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2065)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2065)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2065
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000734303"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..969)
                     /locus_tag="QF480_03260"
     CDS             complement(<1..969)
                     /locus_tag="QF480_03260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009010755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urocanate hydratase"
                     /protein_id="HJN05611.1"
                     /translation="MNSSDFKKAILAGIPDELPRKKDIDPSVSHAPKRKDILSSSEKR
                     LALKNALRYFTAKHHVILAKEFATELEEYGRIYMYRFRPDYSIYARPIEDYPYKSKQA
                     ASIMLMIQNNLDPEVAQHPQELITYGGNGAVFQNWAQYLLTMQYLATMNNEQTLAMYS
                     GHPMGLFPSNKDAPRVVVTNGMVIPNYSKQDDWEKFNAMGVSQYGQMTAGSYMYIGPQ
                     GIVHGTTITVMNAARKSAAPNEDPFAGKLFVTSGLGGMSGAQPKAANISGVISVTAEI
                     NPAASYKRHDQGWVDEIISDLDTLVERVKLAKEKKEVVSIAYDGNIV"
     gene            complement(1008..>2065)
                     /locus_tag="QF480_03265"
     CDS             complement(1008..>2065)
                     /locus_tag="QF480_03265"
                     /inference="COORDINATES: protein motif:HMM:NF033543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="IS256 family transposase"
                     /protein_id="HJN05612.1"
                     /translation="RAIGVSNRRNGHTHKTVRSSAGPMEIHTPRDRIGEYDPLLIKKW
                     ERDLGTGIDDIIISLYARGHSVQDVRYQLRQLYGLEVSAGVISSVTDRVWSEIIEWQQ
                     RPLATCYAIIYLDAIHYKVRESGHIISKAVYTCYGVSSEGQRDVLGLYLNESEGARHW
                     GLILEDIQLRGVEEVLFFCIDGLTGFKDIIEAVYPMSIVQRCIVHMVRSSTRFVSDKD
                     RKAVCRDLRKIYTSANRQQAEVAMEAFGQAWDKKYKEIRPKWEKNWDELMAFLDYGQH
                     IRRMIYTTNPVEALHRVMRKVTKSKGAWSSDKGLIKQLYLALMHNEKSWKRKAFNWLS
                     IQRELIDKFEDRYERFL"
BASE COUNT          580 a          445 c          340 g          700 t
ORIGIN      
        1 aacaatattt ccatcgtagg caattgaaac tacctctttc ttttctttgg ctagtttaac
       61 acgttcaaca agtgtgtcca gatcacttat aatttcatca acccaacctt gatcgtgtcg
      121 tttgtaagag gcagccggat taatttctgc tgtaactgat attacaccag atatatttgc
      181 ggccttgggc tgagctcccg acatgccacc caatccggaa gttacaaaca gtttacctgc
      241 aaatggatct tcattaggtg cagcgctttt ccgtgccgca ttcataactg tgattgttgt
      301 tccatgtaca ataccttgcg gaccaatata catatatgat ccggcagtca tctgcccata
      361 ttgacttacg cccattgcat taaatttttc ccaatcatct tgttttgagt aatttggaat
      421 taccataccg ttagtcacaa ccactcttgg tgcatcttta ttggaaggga ataaacccat
      481 cgggtgacca gagtacatgg ccaaagtttg ctcattattc atagtagcca agtattgcat
      541 ggttaacagg tactgagccc aattttgaaa tactgcgcca tttcctccat aagtaataag
      601 ttcttgagga tgctgtgcaa cttccggatc aagattattt tgaatcataa gcatgattga
      661 tgcagcttgc ttacttttat aagggtagtc ttcaattggg cgggcatata tactatagtc
      721 tgggcgaaat ctatacatat aaattctacc gtattcttct aactccgttg cgaactcttt
      781 agctagtatt acatgatgtt ttgcagtaaa atatcgtaaa gcatttttaa gagctaggcg
      841 tttttcgctg gatgataata tatcttttct tttaggggca tgactaacac tgggatcgat
      901 atctttttta cgaggaagtt catctggaat gcctgctaat attgcttttt tgaaatcact
      961 actattcata acaaatgatg taatttatga tgaacaaaat taatgtttta taagaatctt
     1021 tcatatctat cttcaaattt atcaattaat tctctttgga ttgataacca gttaaatgct
     1081 tttcttttcc aacttttttc attgtgcatt aaagctagat aaagctgttt tatcaacccc
     1141 ttgtcacttg accaggctcc ttttgatttt gttactttac gcattactcg atgcagagcc
     1201 tcaacaggat tagtagtata tatcatcctt ctaatgtgtt ggccataatc taaaaaagcc
     1261 atgagttcat cccagttttt ctcccattta ggccttatct ccttgtactt cttatcccaa
     1321 gcttgtccaa aggcttccat tgccacttcg gcttgctgcc tgtttgcaga agtatatatt
     1381 ttacgaaggt ctctgcaaac agctttccta tctttatcac tgacaaacct tgttgaagaa
     1441 cgaaccatgt gtacaataca tcgctgtact atagacattg ggtatacagc ctctattata
     1501 tctttaaatc cagttaagcc atcaatacaa aaaaatagta cttcttcaac tccgcgtagc
     1561 tgaatatcct ctagtattaa gccccaatga cgtgctcctt ctgattcatt taaatataaa
     1621 cctaaaacgt ctctttgccc ttctgaactt actccatagc aggtatagac agccttactt
     1681 ataatatgac cagactctct tactttgtag tgtattgcat ctaagtatat aatagcataa
     1741 caagtagcta aaggacgttg ctgccattca attatctctg accaaacacg atcagttact
     1801 gaacttatta ctcctgcact tacttcaagt ccatataatt gccgtaattg atatcgaaca
     1861 tcctgaacgg aatgaccacg agcataaaga cttattataa tatcgtcaat acctgtacct
     1921 aaatctcgtt cccatttctt tatgaggagt ggatcatatt ctccaatccg atcacgaggc
     1981 gtatgtattt ccattggacc cgcagaactg cgtacagtct tatgggtatg tccattacgt
     2041 cgattggaaa ctcctatggc tcgac
//
LOCUS       DASCQP010000192         1913 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000739539, whole genome shotgun sequence.
ACCESSION   DASCQP010000192 DASCQP010000000
VERSION     DASCQP010000192.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1913)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1913)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1913
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000739539"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1029
                     /gene="tuf"
                     /locus_tag="QF480_03270"
     CDS             <1..1029
                     /gene="tuf"
                     /locus_tag="QF480_03270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012458382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HJN05613.1"
                     /translation="APEEKERGITINTAHVEYATKNRHYAHVDCPGHADYVKNMVTGA
                     AQMDGAILVVAATDGPMPQTREHILLARQVGVPRLVVFMNKVDMVDDEELLELVDMEI
                     RELLSFYKFDGDNTPVIQGSALGALNQEAKWVEKVRELMEACDEYIPLPTRDQDKPFL
                     MPVEDVFSITGRGTVATGRIETGIIHTGDSVDIIGMGAEKLKSVVTGVEMFRKILDQG
                     QAGDNAGLLLRGIDKDKISRGMVIAKPGSVTPHKNFKAEVYILKKEEGGRHTPFHDKY
                     RPQFYFRTTDVTGEIFLPDGVEMVMPGDNLTVEVHLIAEIAMNKGLRFAIREGGRTVG
                     AGQVTEII"
     gene            1101..1173
                     /locus_tag="QF480_03275"
     tRNA            1101..1173
                     /locus_tag="QF480_03275"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1134..1136,aa:Trp,seq:cca)
     gene            1196..1393
                     /gene="secE"
                     /locus_tag="QF480_03280"
     CDS             1196..1393
                     /gene="secE"
                     /locus_tag="QF480_03280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006800207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HJN05614.1"
                     /translation="MAKLGIFNYFKVSYDEWMHKVSWPSWSELQNSAIVVSVASLIIA
                     FIVYLMDVSFSSILERFYGLF"
     gene            1471..>1913
                     /locus_tag="QF480_03285"
     CDS             1471..>1913
                     /locus_tag="QF480_03285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005844824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006354 - DNA-templated transcription
                     elongation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0140673 - transcription elongation-coupled
                     chromatin remodeling [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination NusG
                     family protein"
                     /protein_id="HJN05615.1"
                     /translation="MSEQSGKKWYVVRAISGKEKRVKEYLESEINRLNLHESISQILI
                     PTEKVFQIRKGKKVSKERNYFPGYVLIEADLTGEIPHIIKNVPDVLNFLGTKGRPEPI
                     REAEVKRILGKVDELAEMGEEVNIPFIVGETVTVIDGPFNSFSGI"
BASE COUNT          604 a          312 c          422 g          575 t
ORIGIN      
        1 gctccagaag aaaaagaaag aggtattact attaatactg ctcacgttga atacgcaact
       61 aaaaatcgtc actatgctca cgttgactgt ccaggtcatg ctgactacgt gaagaatatg
      121 gttacaggtg ctgcccagat ggacggtgct attctcgttg ttgctgcaac tgatggacct
      181 atgccacaaa cacgcgagca tatcttgtta gctcgtcagg ttggtgtacc acgtcttgtt
      241 gtttttatga acaaagttga catggtagac gatgaagagt tacttgaact cgttgatatg
      301 gaaattagag agctacttag cttctataaa tttgatggtg ataatacacc tgttattcag
      361 ggatcagctc ttggtgctct taaccaggaa gcaaaatggg ttgagaaagt tagagaactt
      421 atggaagctt gtgatgagta tattccattg ccaacacgtg atcaggataa accattccta
      481 atgcctgttg aagatgtatt ctcaattaca ggtcgtggaa ctgttgcaac cggtagaatt
      541 gaaacaggaa ttattcatac aggagactca gttgatatca ttggtatggg tgcggaaaaa
      601 ttaaaatcag ttgttactgg tgttgagatg ttccgtaaaa tccttgacca aggtcaggca
      661 ggtgataacg ctggtttact tctcagaggt attgataaag ataaaatcag tagaggtatg
      721 gtgattgcca aaccaggaag tgtaacacct cataagaatt ttaaagctga ggtttatatc
      781 cttaaaaaag aagaaggtgg tcgtcacact ccatttcatg ataaataccg tccgcagttt
      841 tatttcagaa ctactgatgt tactggtgag attttcttac ccgatggtgt tgagatggta
      901 atgcctggtg ataaccttac tgtagaggtg catcttattg ctgaaatagc tatgaacaaa
      961 ggtcttcgtt ttgctattcg tgaaggtgga cgtacagttg gtgctggaca ggtaactgag
     1021 atcatctagt ataaaaatta gcattctatt ctaagggtat tggcgtatgc caactacctt
     1081 tagaatattt gagtttaaat acgggtgtag ctcaattggt agagtggcgg tctccaaaac
     1141 cgtaggttgt gggttcgact cctaccaccc gtgcaaatta aaataactaa gtagtatggc
     1201 aaagttagga attttcaatt attttaaagt aagttatgac gaatggatgc ataaagtatc
     1261 ctggccatca tggagtgagc tgcaaaacag tgcaatcgta gtatccgtcg cttcccttat
     1321 aatcgctttt atcgtttatt tgatggatgt ttcattttca agtatacttg aaaggtttta
     1381 tggattattt taaaattcaa aaggccaaac tgttttgatc aattatatat aattattaac
     1441 tgttttaact aatcacaacc aacctgcata atgagtgaac aatcaggaaa gaaatggtac
     1501 gttgttaggg caataagtgg caaagaaaaa agggtaaagg aatatcttga aagtgagatt
     1561 aatcgtctta accttcatga atctatttcc caaatcctta ttcccactga aaaggtcttt
     1621 caaatacgga aagggaaaaa agttagcaaa gagcgcaact attttcctgg atatgtactg
     1681 attgaagcag acttaactgg tgaaattcct catatcatta aaaatgttcc cgatgtactt
     1741 aattttttag gcacaaaagg acgacctgaa cctatcagag aagctgaagt aaaacgaatc
     1801 ttaggaaaag ttgacgagct tgctgaaatg ggagaggagg taaatattcc atttattgtt
     1861 ggcgaaacgg taactgtcat agacggtcct ttcaacagct ttagcggaat aat
//
LOCUS       DASCQP010000193         2303 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000747878, whole genome shotgun sequence.
ACCESSION   DASCQP010000193 DASCQP010000000
VERSION     DASCQP010000193.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2303)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2303)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2303
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000747878"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..253
                     /locus_tag="QF480_03290"
     CDS             <1..253
                     /locus_tag="QF480_03290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05616.1"
                     /translation="IEVVQMIQDEARSYVEVKLDLEMAMRFFDSNLTYTNIVSYPYPS
                     DKKSYPIRWLIVSLVSLSSFVMALLVIFFLENKKKQSTV"
     gene            276..1730
                     /locus_tag="QF480_03295"
     CDS             276..1730
                     /locus_tag="QF480_03295"
                     /inference="COORDINATES: protein motif:HMM:NF016800.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HJN05617.1"
                     /translation="MTEKTKIVWVYLITALFLVVNFYLILQKDVYWFFLLPVALVILV
                     YYLISLDKILLFITFLTPFAIELRDVEGGLGVSLPTEPLMFGVLLLFVLNLIFEQRYD
                     KKVTSHPISYIIYLSLFWMLFTSFTSEIPLVSFKYLLSRLWFIVPFYFIAAIVFKKIA
                     NIKKFMWLYMSALCAVVIYTLIQHSKFGFEEEAGHWIMSPFYNDHTAYGAAISMFIPV
                     SIGFLFFPGTSRTTKLFASLLLSILVIGVIFSFGRAAWISIVVAFAIFVFIILRIKFY
                     VLAISFAIIVGTFFTFQHEILDRLSKNKQDSSANLAEHIRSISNITTDASNLERINRW
                     QAAMRLYNERPILGWGPGTYQFVYSPYQSSQEKTIISTNLGDKGNAHSEYLGPLAEMG
                     IPGMVIVLILLTFIIITGLRVYKKGDKKIKLLSLMVLLGLMTYFAHGFLNNFLDTDKL
                     SVPFWGFIAILVALDTYHLPLVKSVDDIKSTQDS"
     gene            complement(1734..>2303)
                     /locus_tag="QF480_03300"
     CDS             complement(1734..>2303)
                     /locus_tag="QF480_03300"
                     /inference="COORDINATES: protein motif:HMM:NF012360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0103118 -
                     UDP-3-O-(R-3-hydroxymyristoyl)-glucosamine
                     N-acyltransferase activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HJN05618.1"
                     /translation="GNNVKIGNNCVIHANVSIYDNTIIGDNVIIHSNTVIGSDAYYFQ
                     KRENSYVKFLSGGRVIINSNVEIGASCSIDKGVTGDTIIGEGTKMDNQCQIGHDTVIG
                     KHCLIGAFAAIAGVTVIEDEVVLWARVAINKDIIIGKRSVILATSAVDKTIECNKVYM
                     GSPVMEVRQYWKQLAAIRQLPEIIKKIKL"
BASE COUNT          674 a          406 c          375 g          848 t
ORIGIN      
        1 tattgaggta gttcagatga tacaagacga ggccagatca tatgttgaag taaagcttga
       61 tttagaaatg gctatgaggt tttttgattc aaatcttact tataccaata tagttagtta
      121 tccttatcct tcagataaaa aaagttatcc aataagatgg ttgatcgttt ccctagtttc
      181 tctctcatca tttgtcatgg cactgttagt tatcttcttc ctggaaaata agaagaaaca
      241 atctacagtt taattttatt gaacatcata tggttgtgac agaaaaaact aaaatagttt
      301 gggtatatct aataacagcc ttgttcttgg ttgttaactt ttacttaatt ctgcaaaaag
      361 atgtttactg gttcttttta cttcctgttg ccttagttat tctcgtttat tatctgattt
      421 ctcttgacaa gatactcctt ttcattactt tcctaactcc atttgctatt gaacttcgtg
      481 atgttgaagg tggtcttggg gtctcattac ccactgaacc acttatgttt ggtgttctat
      541 tgctttttgt tctcaacctc atttttgaac agaggtacga caaaaaagtt acatcacatc
      601 caatatcata tattatttac ctatctcttt tttggatgtt gttcacctct tttactagtg
      661 aaataccttt agtatctttt aaatacttat tatcaagact ttggtttata gttccttttt
      721 attttattgc tgccattgtt tttaagaaga ttgcaaacat taaaaaattc atgtggctgt
      781 atatgtctgc attgtgtgct gtagttattt atacacttat ccaacattca aaatttggtt
      841 ttgaagagga agccggacac tggattatgt cccccttcta taacgatcat acagcgtatg
      901 gtgcagcaat ttcgatgttt atacctgttt ctatcggatt tttgtttttc cctggaacgt
      961 caagaactac aaaactgttt gccagcttat tattatcaat cttagttatt ggcgttattt
     1021 tttcatttgg cagagcggca tggataagta ttgttgtggc atttgctatt tttgttttta
     1081 taatattgcg cataaagttt tatgttcttg ctatatcatt tgcaataatt gttggtacgt
     1141 tttttacttt tcagcacgaa attctcgatc gactttcgaa aaacaaacaa gattcatcag
     1201 ctaatctcgc agaacatata agatctattt ccaatattac tactgatgct tccaatcttg
     1261 agagaataaa taggtggcag gcagcaatgc gtttgtataa cgaaagacct atattaggat
     1321 gggggccagg aacttaccag tttgtttatt ctccttacca aagctcacag gaaaaaacaa
     1381 tcatcagtac aaatcttgga gataagggaa atgctcacag tgagtattta ggtccattag
     1441 ctgaaatggg tatcccagga atggtaatag tacttatttt gctaaccttt attataatta
     1501 ctgggttaag agtttataaa aaaggagata aaaaaattaa acttttaagt ttaatggtac
     1561 tgttgggctt aatgacttat tttgcacatg gatttttaaa taattttctg gatactgata
     1621 agctatccgt accattttgg ggattcatag ctatactagt agcgttagat acttatcacc
     1681 taccattagt taaatctgta gacgacatta agtcaacaca ggattcttag taactaaagt
     1741 tttatctttt taattatctc aggaagttgc cgtatagctg caagctgctt ccaatattga
     1801 cgcacttcca ttactggtga acccatgtag actttattac attcaattgt tttatcaact
     1861 gctgaggtag caagaattac agatcttttg ccaataatta tatccttgtt aatagcaact
     1921 cgagcccaga ggacaacctc atcttcaata acagtaacac cagcaattgc tgcaaatgca
     1981 ccaattaggc aatgttttcc aattacagta tcgtggccta tctgacattg gttgtccatt
     2041 ttcgtacctt ccccgataat tgtatcacca gtaactcctt tgtcaattga gcatgaagca
     2101 cctatttcaa cgttgctatt tatgattact cgtcctcctg ataaaaactt aacgtagctg
     2161 ttttcacgct tctgaaaata atatgcatcg ctaccgataa ctgtatttga atgtatgatc
     2221 acattatctc caataatagt attatcatag atgctcacat tggcatgaat tacacaattg
     2281 ttcccaattt taacattgtt acc
//
LOCUS       DASCQP010000194         2072 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000750596, whole genome shotgun sequence.
ACCESSION   DASCQP010000194 DASCQP010000000
VERSION     DASCQP010000194.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2072)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2072)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2072
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000750596"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..267)
                     /locus_tag="QF480_03305"
     CDS             complement(<1..267)
                     /locus_tag="QF480_03305"
                     /inference="COORDINATES: protein motif:HMM:NF012670.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HJN05619.1"
                     /translation="MPDREKRIIEIQDMAKRMRKKVLDMALTAGANSSHFGGGLSIID
                     ITATLYGQIMNLDPKDPEWIERDRFILSKGHGVLGYYTALSEIGY"
     gene            complement(272..1018)
                     /locus_tag="QF480_03310"
     CDS             complement(272..1018)
                     /locus_tag="QF480_03310"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HJN05620.1"
                     /translation="MLLLKNKNTVITGCNRGIGKEIVRVFAENGANIWACVRRESGTF
                     SKYINNLEQKHSVSINPVYFDLSDEEQIKTGVKTIKETKEPVDILVNNAGVIFTALFQ
                     MTSMQKLKEMFEINYFSQMLLTQYISRIMMRQKSGSIINISSSAALEGNEGRTGYASA
                     KAAMITSTKVLAKELAPYNIRVNAVAPGLTQTEMMESSTPEDALKETLNRICMKRVGQ
                     PEEIANSVLFLASDLSSYMTSQVLRVDGGM"
     gene            complement(1025..1492)
                     /locus_tag="QF480_03315"
     CDS             complement(1025..1492)
                     /locus_tag="QF480_03315"
                     /EC_number="4.2.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF019589.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ family
                     protein"
                     /protein_id="HJN05621.1"
                     /translation="MDKLYLDLAGLHEYQQNRYPYLLIDIAEEVIPGKSARGYKNLTD
                     DDWWFEVHFPGDPNMPGALQIEAMVQLGALMVTTLPGNKGKVVYLISANNLKLMKKIL
                     PGDRLDIETELISWKRGMGKCSGAGYVNGEKVCSLDFNIVMPHILEEYKVKKK"
     gene            complement(1548..>2072)
                     /locus_tag="QF480_03320"
     CDS             complement(1548..>2072)
                     /locus_tag="QF480_03320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018288560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN05622.1"
                     /translation="LSWDAVSDDDFQYYVIDKSADSLFMTDQYGSFTTTDTFFNDTSY
                     EYGTVYYRVSAIDYAGNRGDYSNTVSTSILSLDSDVIPKVFALHQNYPNPFNPVTQIR
                     YDLPEDATVNITIYDMVGRVVKTMVNSQQNAGFKSVLWNTTNDFGKPVSAGVYLYRIQ
                     ASEFVQASKMVLIK"
BASE COUNT          604 a          444 c          342 g          682 t
ORIGIN      
        1 atatccaatt tcagatagag ctgtataata tccaagaaca ccatgacctt tacttaaaat
       61 aaagcgatca cgttctatcc attcagggtc tttaggatcc aaattcatta tctgaccata
      121 tagagttgct gttatatcaa taattgaaag ccctccacca aaatgagaac tatttgcgcc
      181 tgcagttaaa gccatatcta gtactttttt tctcatgcgt ttagccatat cttgtatttc
      241 aataattctt ttttcacggt caggcattga attacatgcc cccatcaaca cgtaaaactt
      301 gactggtcat atacgaagaa agatctgacg caagaaacaa cactgaattt gcaatctctt
      361 caggttggcc gactctcttc atgcaaattc tattcagtgt ttcctttaat gcatcttcag
      421 gggtactgct ttccatcatt tcggtttggg taagaccggg agcaaccgca ttaaccctta
      481 tattataggg tgccagttct ttcgctaaaa cttttgtaga agtaatcatt gctgcctttg
      541 ccgacgcata accagtccgg ccttcattac cctcaagcgc agcactggat gatatattta
      601 taatactacc agacttttgg cgcatcatta ttctcgaaat gtattgtgta agcagcattt
      661 gtgagaaata attaatctcg aacatttcct ttaatttttg catggaggtc atttgaaaaa
      721 gggctgtaaa tattacacct gcattattta ccagaatatc gacaggttct ttggtttctt
      781 taatagtttt gacaccagtt ttaatttgct cttcatcact caaatcaaag taaactggat
      841 taatgctgac tgaatgtttt tgctctaaat tgttgatata tttagagaag gttccactct
      901 ctcttctgac acaggcccag atatttgcac cattttccgc aaaaactctt actatctcct
      961 ttcctatgcc acgattacaa cctgtaatga cggtgttttt attttttaat agcagcacaa
     1021 tattctactt ctttttaact ttatactctt cgagaatatg gggcatcacg atgttaaaat
     1081 caaggctgca aaccttttca ccgttgacat aaccagcacc ggagcatttt cccataccac
     1141 gcttccatga tataagctct gtttctatgt ccaagcgatc accgggtagt atttttttca
     1201 ttaatttcaa attattagca gatattagat agaccacttt acccttattc cctggtaatg
     1261 ttgttaccat taatgccccc aattgcacca tcgcttcgat ttgcagggct ccgggcatat
     1321 ttggatcacc tgggaaatgc acttcaaacc accagtcatc atcggttaaa ttcttgtaac
     1381 cccttgcact ttttccaggt ataacttcct cagcaatatc aatgagtagg taagggtagc
     1441 ggttttgctg gtattcatgg agaccagcta aatcaagata taatttatcc attgtatata
     1501 tccttcttca aaaatgaaaa cactatttca cttatattac attaccatta tttaattaaa
     1561 accatcttac tggcctgcac aaattcactt gcttgtatcc ggtaaagata aaccccggca
     1621 ctcactggct taccaaaatc attcgtagta ttccataaga ctgatttaaa gccggcgttc
     1681 tgctggctgt ttaccatagt tttaacaacc cgtcccacca tgtcgtagat ggtgatgttg
     1741 accgtggcat cttccggtaa atcatagcgt atttgtgtta ccggattgaa tggattgggg
     1801 tagttctggt gcaaggcaaa gacttttgga attacgtcac tatccaatga aaggatgctt
     1861 gtggaaacag tgttactgta atctcctcta ttcccagcat aatctattgc tgaaacacga
     1921 taatacactg taccatattc atagctggta tcattaaaaa atgtatctgt tgtggtaaaa
     1981 gaaccatact gatcagtcat aaaaagagaa tctgcagatt tatcaattac atagtattga
     2041 aaatcatcat cagatacagc atcccaagat ag
//
LOCUS       DASCQP010000195         2124 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000759241, whole genome shotgun sequence.
ACCESSION   DASCQP010000195 DASCQP010000000
VERSION     DASCQP010000195.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2124)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2124)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2124
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000759241"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1601)
                     /locus_tag="QF480_03325"
     CDS             complement(<1..1601)
                     /locus_tag="QF480_03325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05623.1"
                     /translation="MKNRSTYIILMLAICVVLMSSCKRVVIKIDSIPENTPADQPIYV
                     TGNFNNWDPGEEMYILRMGTDSNYYFKLPPGYGTVEYKFTRGDWTTVEKGLCGEEIDN
                     RQLSVATNDTITNSIQSWNDLDPVNCPQLTIKIENMPKNTPVSDVIAIASNFNSWDPD
                     DLSVFKKSSSGDMYLTVNRPPGINRLEYKLTRGKLSASESDEFGNAIPNRIVEFGKKD
                     TVKVNIEGWTDLPKGSSNLVTLIIKNLPENTPHYDDLFMASNLNSWVTDDRNYQFQRN
                     SKDQLFISVPRKKIILEYKVTRGDWNTQEVDKNGYHISNREVDLENIDSVYIDIIRWE
                     DMGRSGGDDITVILDSLPVSTPDGAKIYISGNFNGWNPGRLRHRFRKNANGEYAVNLP
                     RDDGDIEFRITRGSWETAQLDSYGSDIFPYTYNYYDIDTLFVNVENWKDMPTKEVADV
                     TLVIDMLPENTPTGDNIFLAPEFNGWNPGDENWIFDKLPDGRLIITFPTNGNTVKYKI
                     TRGGWDTVELNEEGNDIPNRAIYYG"
     gene            complement(1598..>2124)
                     /locus_tag="QF480_03330"
     CDS             complement(1598..>2124)
                     /locus_tag="QF480_03330"
                     /inference="COORDINATES: protein motif:HMM:NF016296.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="LytTR family DNA-binding domain-containing
                     protein"
                     /protein_id="HJN05624.1"
                     /translation="FDEYAIQAFKVNSIDYLLKPVKQDELNGALDKFHSLIVAGKNKE
                     SGLKIEQIEKLLEISKPAYKSRFLTRVGDQIMYINVNEIAYFKAEDNEVQIITENSKR
                     YFIDYSLEQLGAIVDPNIFFRANRSYLINITSINKISKYFNSRIHLELVPATEDSLLI
                     SRVKVPDFLNWIDK"
BASE COUNT          643 a          444 c          318 g          719 t
ORIGIN      
        1 aacccataat atatagcacg gttgggaata tcgttaccct cctcatttaa ctctacagta
       61 tcccaaccac cgcgtgtaat tttatatttt acggtatttc cattagtagg aaaagtaatt
      121 attaacctcc catcaggtaa cttatcaaaa atccaatttt catctccagg attccaacca
      181 ttaaattcag gggcaagaaa aatattatca ccggtaggag tattctcagg tagcatgtca
      241 attaccaaag taacatcagc tacctctttt gttggcatgt ctttccagtt ctcaacatta
      301 acaaacaaag tatcaatgtc ataataatta tatgtgtatg gaaaaatatc agatccataa
      361 ctatctaact gagctgtctc ccaagaacca cgagtaattc taaattcaat atcgccatca
      421 tcgcgaggta gatttacagc atattctccg ttagcattct tgcgaaaccg gtgtcgcagc
      481 cttccgggat tccaaccatt gaaattccct gaaatataaa tcttagcacc atcaggtgtt
      541 gataccggca aactatccag gataactgta atatcatcac cccctgacct gcccatatcc
      601 tcccatctta taatatcaat atatacagaa tcaatattct caaggtctac ttctcgattc
      661 gatatatgat acccattctt atcaacttcc tgggtattcc aatctccgcg tgtaacctta
      721 tattccaata tgattttctt tcttggtaca cttatgaaca gctggtcttt tgaatttcgt
      781 tgaaactggt aatttctatc atctgttacc catgagttta gattgctagc cataaaaagg
      841 tcatcataat gaggagtatt ttcgggtaga tttttaatta tcagagtaac tagattcgaa
      901 ctacctttag gtaaatctgt ccatccctca atattaacct taactgtatc tttcttccca
      961 aactctacaa tcctatttgg tattgcattt ccaaactcat cggattcaga agcggataat
     1021 ttaccacgag tcagcttata ctcaagccta ttgatgccag gtgggcggtt aacagttaaa
     1081 tacatatcac ctgagctact ttttttaaac actgagagat catcggggtc ccatgagtta
     1141 aagttacttg caatggcaat tacatcgctc acaggggtgt ttttgggcat attttcgatc
     1201 tttattgtaa gttgaggaca gttaacagga tcaagatcat tccagctttg gatagaatta
     1261 gttatcgtat cattggttgc aacggatagt tgcctgttat cgatctcttc tccacatagt
     1321 cccttttcta cagttgtcca atcgcctctt gtaaatttgt actcaacagt tccatatccg
     1381 ggaggtaatt tgaaataata gttactatca gttcccattc ttagtatata catttcttcg
     1441 cctggatccc aattattaaa attacccgta acatatatcg gttgatcagc cggcgtattt
     1501 tcaggaatag aatctatctt tataaccacc cttttacaag atgacataag aaccacgcat
     1561 attgccaaca taagaattat atatgtactt ctatttttca tttatctatc caatttagaa
     1621 aatcaggaac ctttaccctg cttatcaata gagaatcttc agttgcaggc actaattcga
     1681 ggtggatccg actgttaaaa tacttgctta ttttatttat tgatgtaatg ttgattaaat
     1741 aacttcggtt tgccctgaag aaaatattag ggtcgactat cgcacctaat tgctcaagag
     1801 aataatctat aaaataccgc ttactatttt ctgtaataat ttgaacttca ttatcttcag
     1861 ctttaaaata ggcaatctca ttaacattga tatacataat ctgatcccct accctggtta
     1921 aaaaacgtga tttatatgct ggtttggaaa tttcaagcag cttttcaatt tgctcaattt
     1981 ttaaacccga ttctttattc tttcctgcta ctatcaatga atgaaattta tcaagagctc
     2041 cgttaagttc gtcctgtttt accggtttta acagataatc aatactattg actttaaacg
     2101 cctgaatagc atattcatca aatg
//
LOCUS       DASCQP010000196         1538 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000759890, whole genome shotgun sequence.
ACCESSION   DASCQP010000196 DASCQP010000000
VERSION     DASCQP010000196.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1538)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1538)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1538
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000759890"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(57..290)
                     /locus_tag="QF480_03335"
     CDS             complement(57..290)
                     /locus_tag="QF480_03335"
                     /inference="COORDINATES: protein motif:HMM:NF021546.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YitT family protein"
                     /protein_id="HJN05625.1"
                     /translation="MRDKIVNDLNRGGTFVKGEGMYSGNEKSIAFTAVSRREMAMLQE
                     FIHQIDPNAFVTALNSNEILGNGFKSLKEKVED"
     gene            complement(285..1025)
                     /locus_tag="QF480_03340"
                     /pseudo
     CDS             complement(285..1025)
                     /locus_tag="QF480_03340"
                     /inference="COORDINATES: protein motif:HMM:NF014627.3"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YitT family protein"
     gene            1214..>1538
                     /locus_tag="QF480_03345"
     CDS             1214..>1538
                     /locus_tag="QF480_03345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05626.1"
                     /translation="MKKILLSFLVIAISVYSLLSQVNREIVLVEIATGTLCQYCPGSA
                     MGLADLYNNGDPVAGIEYHSYSGGDPFNTPEAAARNAYYGVTGYPTAQFDGEWGEVVG
                     GSNTQT"
BASE COUNT          519 a          302 c          242 g          475 t
ORIGIN      
        1 tgggcatata cagagtacta acacgttaaa ttggaattca aaataaacct tcctatctaa
       61 tcctcaactt tttctttcaa cgacttaaat ccatttccaa gtatttcatt cgaattcaaa
      121 gcagttacaa aagcattagg gtcaatttga tggatgaatt cctgtagcat tgccatctca
      181 cgacgtgaaa cagcagtaaa tgcgattgat ttttcatttc cgctatacat accttcccct
      241 ttaacaaatg ttcctccacg gttaagatcg ttaactattt tatctcttat ttccttagat
      301 ttatctgaaa caataaaaag aaccttatca taacccatcc cttcaagaat aacatcaaca
      361 actttacctg taataaaaat aacaatgagt gaataaagtg gaattttcca atcctgaaaa
      421 gcaattaatc caacaaggac aatcattgag tcaacaatta tcatcaattg tccaagcgga
      481 agctttgtgt atttactaac tatcattgct acaatatcag accccccgga agtagctttt
      541 gctttaaata taagcccgag gccaacaccg ataaatagcc caccaaaaat tgaagataat
      601 tacgcatcat ccacaactag tggttcagaa ccataaaaat atgtaatggt gtccatgaaa
      661 atagccgtag caagaaaacc aactactgtt ttaactccaa atctaggacc aaggattttc
      721 acacctataa tagttagggg tatatcgaaa gcaagagcca tcatcccaac tggcgttcct
      781 aaaatgtagt gtaatactat ggaaataccg tatacaccac caggtacaat tttgtatggt
      841 gtaataaaca ttacataacc cgatgccatg atgaaggcac caattaatat catactgtaa
      901 ttcttgatcc attgtatgct aaacaatttg tctttttgaa taaatgccat tgttccaaag
      961 tttctaaccg atttctccaa aaaaccagta cggttattcg atataaaaag tccgcaaaag
     1021 tacattttaa agcatatcaa caaggacaaa aacaattatt tatttgcttg gtttgtagca
     1081 ctcttaaagc ctcgccatca aggaataatt actgatttgc tgcactatta aaagtctaga
     1141 ttattttttt aactttgcga gcatgattta tgcatttaat atgtagttct taaatttaat
     1201 caaaccaaat tcaatgaaaa aaattctact ttctttttta gtgattgcta tttcagtcta
     1261 tagtctttta agccaggtaa accgagaaat tgttctagtt gaaattgcca ctggcacact
     1321 gtgccaatat tgcccaggat ctgctatggg attagctgat ttatataata atggtgatcc
     1381 ggttgctggt attgagtacc atagttacag cggtggtgat ccattcaata ctcccgaggc
     1441 agccgcacga aatgcttatt atggtgttac cggttatcct accgcacaat ttgatggtga
     1501 atggggtgag gttgttggtg gtagcaatac acaaacaa
//
LOCUS       DASCQP010000197         2346 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000760563, whole genome shotgun sequence.
ACCESSION   DASCQP010000197 DASCQP010000000
VERSION     DASCQP010000197.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2346)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2346)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2346
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000760563"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..905
                     /locus_tag="QF480_03350"
     CDS             <1..905
                     /locus_tag="QF480_03350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="decatenates newly replicated chromosomal DNA and
                     relaxes positive and negative DNA supercoiling; Derived by
                     automated computational analysis using gene prediction
                     method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA gyrase/topoisomerase IV subunit A"
                     /protein_id="HJN05627.1"
                     /translation="IYFTANPNGEAEIVKINLRAKPKLKKLSFDFDFSSLAIKGRKSR
                     GNILAKHTIKNIIQREEGVSTLGARSIWYDDTVRRLNTDERGEYIGAFIGDDRILCIM
                     KNGELKLTGYDLSTHFDDEIKLVAKFDPDKIITAVYYDSEQKKHYVKRFHLPENMTVN
                     KLLNFIGEEKASKLIAFSFDHLPRLQFEIKKKSSGETEVEVIPLADFIAIKSYRAKGK
                     RLSRYDLRKIKFIEPLPYTPPVTEPIEATNIEEENPEDKASNIAEKKTKEIVKDKNNQ
                     PDNKEEEIHPPEDKDEPPQLELDF"
     gene            1047..1700
                     /locus_tag="QF480_03355"
     CDS             1047..1700
                     /locus_tag="QF480_03355"
                     /inference="COORDINATES: protein motif:HMM:NF012402.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HJN05628.1"
                     /translation="MQTSGLHKLIGIKNLTDSTYLLQIEKNNMIFEAGQHILLGRYND
                     PDQREYSIYSGADDNYLEILIKEISDGTVSKHLKNILPGEILNVEGPLGFFGLDKEKI
                     DSHKHLFIASGTGIAPFHSMVRSYPTLNYTILHGIRTCDEAYGKESFEPDRYIRCASR
                     DTSCEFTGRVTDYIKQNNFDGDTICYFCGNFKMIREAMQLLEEKGIPGSQLHAEVYF"
     gene            1714..>2346
                     /locus_tag="QF480_03360"
     CDS             1714..>2346
                     /locus_tag="QF480_03360"
                     /inference="COORDINATES: protein motif:HMM:NF013112.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05629.1"
                     /translation="MKYHIVQLGCQMNISDGERVQMVLDKMGFVPTEKAEEASLIGVI
                     ACSVRQKGIDKVYNLVNVWNKWKNNKNLITFVSGCVLPSDKQKFLKLFDIVTTMSQLP
                     ELPEMILQYGVVSQVGIQSQYPDLEKSVKENIGYPKFTEFKINPGRISLSQKNIISKP
                     EVGIEEFWNIEPKYGSGFEAYIPIQNGCDKFCTFCAVPYTRGREVSRPSDE"
BASE COUNT          843 a          385 c          439 g          679 t
ORIGIN      
        1 ttatttattt cacagcaaac ccaaatggcg aagcagagat tgtcaaaata aacctaaggg
       61 ctaaaccaaa gttaaagaaa ttaagttttg attttgattt tagtagtctt gcaatcaaag
      121 gaagaaagtc acgtggtaat atacttgcta aacatactat caaaaacatt attcagcgtg
      181 aagaaggcgt ttctaccctc ggcgcccgaa gcatttggta tgatgatact gttcgtagat
      241 taaacactga tgaaagaggt gaatatattg gtgcttttat aggtgatgac agaattcttt
      301 gcattatgaa aaatggagaa ttaaaactaa ccggctacga tttatcaacg cactttgatg
      361 atgagataaa gttagttgct aagtttgacc ctgataaaat catcacagct gtttattatg
      421 atagtgaaca aaaaaaacat tacgtaaaac gttttcattt gcctgagaac atgactgtta
      481 acaaattatt aaattttatt ggtgaggaaa aagcgtcgaa attaatagcc ttttcttttg
      541 atcacttacc tagattgcaa ttcgaaatta agaaaaagag tagtggtgag acagaagtag
      601 aagttatacc attggcagat tttattgcga ttaaaagtta tcgggcaaaa ggtaaacggc
      661 tttccagata cgacctgcgt aaaataaaat ttatcgaacc tctcccctac actccaccag
      721 taacagagcc aatagaggca accaatattg aagaagagaa tccggaggat aaggcatcta
      781 atatagctga gaaaaagacg aaagaaatag ttaaggataa gaataatcaa cccgataata
      841 aagaagagga aatccatcca cctgaggaca aagatgaacc accccagcta gaacttgatt
      901 tttaataata acttttcttt caaaattgat gcaaggatta tcactctcct gctaatttac
      961 ttatctaaca aaaaagatat atttttgcca ccccaaaaag ttaaccttct ttagatttat
     1021 tagaactaaa ataagctata tttactatgc aaacaagcgg tttacataaa ctcataggaa
     1081 ttaaaaacct gactgactca acatacttgc ttcaaattga aaaaaataat atgatctttg
     1141 aagctggcca acatatactg cttggtcgtt acaatgatcc tgatcaacga gaatattcta
     1201 tctacagtgg cgctgatgat aattatcttg agattctcat aaaagaaata tctgacggaa
     1261 ctgtatcaaa acatctgaaa aacatattac caggtgaaat attaaatgtt gaggggccat
     1321 taggtttttt tggtttagat aaagaaaaaa tagattcaca caagcatctg tttatagcaa
     1381 gtggaacagg tattgctcct tttcacagca tggttcgcag ttatcctacc ttaaactaca
     1441 caatattgca tggcataaga acttgtgacg aagcttacgg aaaagaatcc tttgaacctg
     1501 acaggtacat tagatgcgcc tctcgcgata cttcttgcga atttactggc agagttacgg
     1561 attacatcaa acaaaataat tttgatggag atacaatatg ttatttttgt ggcaatttta
     1621 agatgatacg tgaagcaatg cagttgcttg aagaaaaagg aattccaggc agccaactac
     1681 atgctgaagt atatttttaa tttttaaagt gtcatgaaat accacattgt acagctagga
     1741 tgccaaatga atattagtga tggcgaacgt gttcagatgg tgctcgataa aatggggttt
     1801 gttccaacag aaaaggctga agaagcaagt ctgataggtg ttattgcatg ttcggttcgc
     1861 caaaaaggta ttgataaggt atataatctt gtaaacgtgt ggaacaagtg gaaaaacaat
     1921 aaaaatctta taacttttgt ttctggttgt gtgttaccct ccgacaagca aaaattcctt
     1981 aaacttttcg atattgtaac aacaatgagt cagctacctg agctaccaga aatgatactt
     2041 caatatggag ttgtatcaca agtaggtata caatcacaat accctgattt ggaaaagtct
     2101 gtgaaggaaa atatcggtta tccaaaattt actgaattta aaatcaaccc aggacgaatt
     2161 agtctttctc aaaaaaacat aataagtaaa ccagaggtgg gcattgaaga gttttggaat
     2221 attgaaccaa aatacggatc gggctttgaa gcatacatac ccatccagaa tggctgtgac
     2281 aaattctgta cattttgtgc tgttccatat actcgtggtc gtgaagtatc ccgtccgtct
     2341 gatgag
//
LOCUS       DASCQP010000198         4135 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000762013, whole genome shotgun sequence.
ACCESSION   DASCQP010000198 DASCQP010000000
VERSION     DASCQP010000198.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4135)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4135)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4135
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000762013"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1374
                     /locus_tag="QF480_03365"
     CDS             <1..1374
                     /locus_tag="QF480_03365"
                     /inference="COORDINATES: protein motif:HMM:TIGR00225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HJN05630.1"
                     /translation="ALIQKQGEYVVITEPYEKFPAQELGLKAGDMIYAINGESAMGKS
                     SPEVSEKLKGTPGTSIILTIKSYGDSVTHDIELIRKRIKIPNIPFYGMVSNNIGYINL
                     TQFNPQSAIEVKTAFNNLVSENDLKGIILDLRGNGGGLLNEAVDIVNIFVPKNKIIVT
                     TKGKMSNNTFVHRTRTSGVDTKIPLVVLVNGFSASASEIVAGAIQDLDRGVIIGDKTF
                     GKGLVQNILELPYNSKMKLTVAKYYIPSGRCIQAIDYFDNIDVDSLSKLPDSLLQAFS
                     TSGGRAVYDKGGIEPDIAIDGRNYSQISGDLYSQNYLFKFANDFVLKHDSIPSAKDFT
                     ITDSVFNDFERYVEDQGFDYKTETEVLLENIRKSSEREDYLDAMDETLTKLADEITIE
                     KKKDIDKNRTEIEEMLKIEIVTRYYYQQGKIESSLVNDPEIIEAIKVINNKSLYSSIL
                     NGSYNKQ"
     gene            1405..3084
                     /locus_tag="QF480_03370"
     CDS             1405..3084
                     /locus_tag="QF480_03370"
                     /inference="COORDINATES: protein motif:HMM:NF016800.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HJN05631.1"
                     /translation="MVNSSTNIHSWAYTITLMLLAASIPLSKFTMSVTEFMLLGLWIW
                     SGFSFSVSYRFYKLGGFFTGTVQFLGYIITLTYNNLIDKFILFYRNKPALVFTLIYFV
                     HILGLIYTSDLNYAVKDLRVKLPLLLLPLIISTMENISSKRFRSLMIIYSLSVLISTV
                     ISAFGFLTNQYMDIREISAFISPIRLGLNVSFAFFIMVYFVFHEKKFSSWQTIGFIVM
                     AVWFLAFLFLLEAITSIVIILLVSIGYLIWRLFHSMFLWQKLVLFLIAIAIPVMFFMH
                     VQNIIRDATTAPNIEFGKLDKYTKQGNSYMHDTLDLQIEDGKYVGLYLCYEELKSAWN
                     ERSRLDYHAKAAEGHLINSTLIRYLTSKDLRKDAEGVNALTDEDVYMIEQGLANYNYV
                     HTPGLRVRILKMIKGYEVYQQTGNPSGSSLMQRLEYVKASLNIIKDNLLIGVGTGDLE
                     DAFNKQFADMNSALESQYRYHAHNQFLGISVALGLIGFIVFIVGLIYPAVVLSGFKDY
                     YFGIFFLIMIISMFSDDTLETQAGVTLFTFFYSLLLFGRKKGDSMPAKVSD"
     gene            3280..3777
                     /gene="cdd"
                     /locus_tag="QF480_03375"
     CDS             3280..3777
                     /gene="cdd"
                     /locus_tag="QF480_03375"
                     /EC_number="3.5.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007561690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004126 - cytidine deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0008655 - pyrimidine-containing compound
                     salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine deaminase"
                     /protein_id="HJN05632.1"
                     /translation="MKIKKITISFEEYDENEKLSPSDSELIDQATMALKGSYAPYSDF
                     HVGAAVLLDNGEIIKGANQENAAYPSSLCAERVALFYANSKYPDATVVSLAITVSTDH
                     FMCNNPVSPCGSCRQVIAETEKKQNRTIKIIMKGEKGNTRIFDGIENLLPVMFHEEKL
                     KKSKK"
     gene            3829..>4135
                     /locus_tag="QF480_03380"
     CDS             3829..>4135
                     /locus_tag="QF480_03380"
                     /inference="COORDINATES: protein motif:HMM:NF016103.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ChaN family lipoprotein"
                     /protein_id="HJN05633.1"
                     /translation="MKKILTIILLFVITVGFNKDKIAYKFFNADGKKIKYSKVLKEIA
                     QADIVFFGELHNNPICHWLQYELTKDLYMDLNGDTILGAGMIEADNKVILNKDLAGII
                     "
BASE COUNT         1384 a          578 c          768 g         1405 t
ORIGIN      
        1 gccttaattc aaaaacaggg tgaatatgtg gttatcaccg aaccatatga aaaattccct
       61 gcgcaggagt taggtttaaa ggcaggtgat atgatctatg cgattaatgg tgaatctgcc
      121 atgggaaaat ctagtccaga agttagtgaa aagttaaaag gtactcctgg cacttctatt
      181 attctaacaa ttaagagtta cggcgattcc gttacacatg atattgaact tattagaaaa
      241 agaatcaaaa taccaaatat tccgttttac gggatggtga gtaacaacat tggctatatt
      301 aaccttactc agtttaaccc acagtcagct attgaagtta aaactgcatt taacaatctt
      361 gtttctgaaa atgacctcaa aggaataatt ctagaccttc gtggtaatgg cggtggcttg
      421 ctaaatgagg cagttgacat agttaatatt tttgtgccga aaaataagat aatagttacg
      481 acaaaaggta aaatgagtaa caatacgttc gtccatcgaa cacgcactag tggtgttgat
      541 acaaaaattc cacttgtagt tttggttaac ggttttagtg cctcggcgtc tgaaattgta
      601 gctggagcaa tacaagattt ggatagagga gtgattattg gggacaagac atttggaaag
      661 ggtcttgttc aaaatattct agaacttcca tataattcaa aaatgaagct cactgttgct
      721 aaatattata ttccaagtgg tagatgcatc caagcaattg attacttcga taatatagat
      781 gtcgatagtt taagcaaact gccagattca ttgttgcaag ctttcagtac ctctggcggt
      841 agggctgttt atgataaagg tggtattgaa cctgacattg ctattgatgg aagaaattat
      901 agccagataa gtggcgatct atactcacaa aattacttat ttaagtttgc taatgatttc
      961 gtattaaaac acgattcgat accttcagct aaggatttca caattacaga ttccgtgttt
     1021 aatgattttg agagatatgt agaagatcag gggtttgatt ataaaactga aactgaagtt
     1081 ctacttgaaa atataagaaa aagttctgaa agagaagatt atttagacgc tatggatgaa
     1141 acactcacta agttagctga cgagatcacc attgaaaaga aaaaagatat tgataaaaac
     1201 aggactgaga tcgaagaaat gctcaagatt gagatagtta caagatatta ttaccaacaa
     1261 ggtaaaattg agtcgtcttt ggttaatgat cctgaaatta tagaagctat aaaagtaata
     1321 aacaacaaat ccctatattc ctcaatcctt aatggatcat acaacaaaca ataaagttat
     1381 aatgaattca ttgaggaggt ttccatggta aattcaagta caaatattca ttcatgggct
     1441 tatacaatta cattaatgtt gttggctgca agcatcccat tgtctaaatt tacaatgagt
     1501 gttactgaat ttatgctcct tggtttgtgg atttggtctg ggttttcttt tagtgtcagc
     1561 tatcgatttt ataagctggg tggatttttt acaggtactg ttcaattttt aggttatata
     1621 ataaccctaa catataataa tctgattgat aagtttattc tattttacag aaataaacct
     1681 gctctggttt ttaccttgat ttactttgtt cacatccttg gtttaattta cacttcggac
     1741 ttgaattatg cagtaaaaga ccttcgggtt aagctaccat tattgctgtt gcctttgatt
     1801 atctcgacta tggagaatat tagctcaaaa cgtttcagat cgttaatgat tatttattct
     1861 ctgtcggtac ttataagtac ggtaattagt gcattcggtt tccttacaaa tcaatatatg
     1921 gatattagag aaatttccgc atttatttct cctattcgcc ttggcctaaa cgtaagcttt
     1981 gcttttttta taatggtata ttttgttttt catgaaaaga agtttagtag ctggcaaact
     2041 atcggtttca ttgtaatggc ggtatggttt ttagcatttt tatttttatt ggaagcaata
     2101 acttctattg taattatact gttagttagt attggatact taatttggag attatttcat
     2161 tctatgttct tgtggcagaa attagtgcta tttttaattg caatagcaat accagttatg
     2221 ttctttatgc atgttcaaaa cataattcgt gatgccacca cagctccaaa tattgaattt
     2281 ggaaagcttg ataaatatac caaacaggga aatagttata tgcatgatac acttgattta
     2341 caaattgaag acggtaaata tgttgggcta tatttatgtt acgaggaact taaatctgca
     2401 tggaacgaaa gaagtagatt ggattatcat gctaaagcag cagaaggtca cctcattaat
     2461 tctacactaa taagatattt aacgtctaaa gacctcagaa aggatgctga aggagtaaac
     2521 gctttgacgg atgaagatgt atatatgatt gagcagggtc tagcaaatta caattatgta
     2581 catactcccg gattaagggt cagaatatta aaaatgatta aaggttatga agtttaccag
     2641 caaaccggca accctagtgg tagttcatta atgcaaagat tagaatatgt aaaagcctct
     2701 ctaaatatta taaaggataa tttattaata ggtgttggca ctggagatct tgaagatgcc
     2761 tttaataaac aatttgctga tatgaattca gcacttgaat cccaatacag atatcatgca
     2821 cataatcaat ttcttgggat tagcgttgct ttaggattaa ttggatttat tgtttttatc
     2881 gtaggtttaa tttatcctgc tgtagtgtta tcgggattta aagattatta ctttggtatc
     2941 ttctttctta ttatgattat atctatgttt tctgacgaca ctttggagac tcaggctggt
     3001 gtaacattgt ttaccttctt ttattcactt ttattatttg gtcgtaaaaa aggagatagt
     3061 atgcccgcca aagttagtga ttaggtgata catgctattt gattgcttat tacggttgtc
     3121 aactgatgcc taagctagaa gttagaagat tgtttctcga tttcaaaatt tctacaattc
     3181 caatattatc atattcacca ctgtcgattt tttcgaaata cttagggatt atttatataa
     3241 gtatgtaact tatttttatt ttagcattta aatttggtta tgaaaattaa gaaaataact
     3301 atcagttttg aagaatatga tgaaaacgaa aaattatccc catcagattc agagttaatt
     3361 gatcaagcta ctatggcatt gaaaggatct tatgctcctt actcagattt tcatgttgga
     3421 gcagctgtgt tacttgataa cggtgaaata ataaaaggag ccaatcaaga gaacgctgct
     3481 tatccatcaa gtttatgtgc tgaaagagtt gcattgtttt acgcaaattc gaaatatcca
     3541 gatgcaactg ttgtttcgct cgcaattaca gtaagtaccg atcattttat gtgtaataat
     3601 cccgtttctc cttgtggttc atgcagacaa gttattgcag aaactgaaaa aaaacagaat
     3661 aggacgatta agattataat gaaaggtgaa aagggaaata caaggatttt tgatggtata
     3721 gagaatctct tgccagtaat gtttcatgaa gaaaaactaa aaaaatcgaa aaaatagttt
     3781 gggatagatt atatattaaa atttgaaatt tgttaaaaaa ctgataaaat gaaaaagata
     3841 ctaactataa ttttgttgtt tgtaattacc gttggattta ataaggataa aatagcttat
     3901 aagtttttta atgctgatgg aaagaagatt aagtattcaa aagtattaaa ggaaattgct
     3961 caagctgata tcgtattttt tggagaatta cacaataatc ccatttgcca ttggctacag
     4021 tatgaattga caaaggatct ttacatggat ctaaatggcg atactatttt gggtgcaggt
     4081 atgattgaag ctgataacaa agtaatttta aataaagatc tcgctggtat aatta
//
LOCUS       DASCQP010000199         1793 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000764223, whole genome shotgun sequence.
ACCESSION   DASCQP010000199 DASCQP010000000
VERSION     DASCQP010000199.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1793)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1793)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1793
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000764223"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(115..1317)
                     /locus_tag="QF480_03385"
     CDS             complement(115..1317)
                     /locus_tag="QF480_03385"
                     /inference="COORDINATES: protein motif:HMM:NF025647.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin domain-containing protein"
                     /protein_id="HJN05634.1"
                     /translation="MIKRIIVIGLLIATISGISQEYSISGTISGLENENLYLMQLMGE
                     KRKIVDTAQTDITGAFTFILPEKRESGMYVVIKGPGQAVELIYNNENIQFTTSGFTND
                     DGIQIISSIENLIYYDYLGIKGINMYKLDVLNTLIKNYPPNDEFFQDALKQFKFLQNK
                     LVKRIDELIKNNPTTLASRYIQNDRPVFVDLTLSNDDQNVMLKKHYFDNVSFSDTMLI
                     RSTILTSKVVGYLSLYQNNANSQEELEDNMLIGVDSIFSYAQENQQVYEFLVDFLISG
                     FESIGFEKGLEHIANASSLDKFCENTERKQKLENKFELIKRLAIGQTAPDFVTTDIVG
                     REVTLSKIDAERTLLVFWASWCSHCDDILPIINSYYSNGINMEVVSVSIDESKDDLMK
                     SINETNYG"
     gene            1388..>1793
                     /locus_tag="QF480_03390"
     CDS             1388..>1793
                     /locus_tag="QF480_03390"
                     /inference="COORDINATES: protein motif:HMM:NF012596.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HJN05635.1"
                     /translation="MKFIKISIIDDVATITFNNDSKSNALSFEMLKEIEQSLDKFSDK
                     NVRVVIIRSNPDAKVWSAGLDINELPEPGKDPLPYSHPLEELMRKIEDHNAPIIAMVT
                     GSVWGGGFDFAVTCDMIIGSPSCSFAITPAKIG"
BASE COUNT          573 a          323 c          278 g          619 t
ORIGIN      
        1 aggtttacct ataatttttt tattctcatc gagcacaaaa atggaaggtg tagctacgat
       61 tccatattct tcaattatgg gaccattcca tccatttagt tcagcaattt gtatctaacc
      121 ataattagtt tcatttatac ttttcatcaa gtcatctttt gattcatcaa tagaaacaga
      181 aacaacttcc atatttattc cattgctgta atatgaatta attatcggca aaatatcatc
      241 acaatgagag caccagctag cccaaaaaac aagcaatgtt ctttcagcgt caattttact
      301 caaagtaact tctctaccaa ctatatctgt ggtaacaaaa tcgggtgcag tttggccaat
      361 agcaagtctt ttaataagtt caaatttatt ttcaagcttt tgtttacgct ctgtattttc
      421 acaaaattta tcaagagaac ttgcatttgc gatatgttca agaccctttt caaagccaat
      481 agattcaaaa ccacttatta aaaaatctac taaaaactcg tatacctgtt gattttcttg
      541 cgcatagcta aatatcgaat caacacctat taacatattg tcttctaact cctcctgcga
      601 atttgcatta ttctgataga gagagaggta gccaaccact tttgatgtga ggattgtact
      661 tctaattagc atagtatcac taaaactcac attgtcaaaa tagtgctttt ttagcatcac
      721 attttgatca tcattactca gtgtaagatc aacaaacaca ggtcggtcgt tttgtatgta
      781 ccgggaagca agagtagtgg gattattctt aattaattca tcaatgcgtt taaccaattt
      841 gttttgcaga aacttaaact gttttagtgc atcctgaaag aactcatcat taggtggata
      901 attttttatg agtgtgttca atacatctaa cttgtacata tttattccct taataccaag
      961 ataatcataa taaataagat tctcaatcga gcttatgatc tgaatcccat catcattggt
     1021 aaatcctgaa gttgtgaatt gaatattctc attattgtaa ataagttcta ctgcttgtcc
     1081 aggtccctta attactacat acataccgct ctcacgtttt tcgggaagaa taaatgtaaa
     1141 tgcacccgta atatctgttt gtgccgtgtc aactatcttg cgcttttcac ccatcaattg
     1201 cattaaatat aggttttcat tttccaaacc tgatattgta ccactaatac tgtattcctg
     1261 agaaattcca gagatagttg caattaataa gccaattact attatgcgtt ttatcatttt
     1321 tttttgatta tatctgccaa aattaaacaa aacacttagt tttatacttt atttatcaaa
     1381 cagcaatatg aaatttatta aaatttcaat tatagatgac gttgctacta taacttttaa
     1441 taatgatagt aagagtaacg cattgagttt tgaaatgctt aaagaaattg aacaatcatt
     1501 agataagttt tcagataaga atgttagagt tgtaattata agaagtaatc ctgacgcaaa
     1561 agtttggtca gccggcttgg atattaatga gctacccgag cccgggaagg atcctcttcc
     1621 atacagccac ccacttgaag agcttatgcg gaagattgaa gaccataatg caccgattat
     1681 agctatggta acaggttctg tttggggagg tggtttcgac tttgctgtca catgtgatat
     1741 gataattggg tcgccgagtt gttcatttgc catcactccg gcaaaaattg gtg
//
LOCUS       DASCQP010000200         1793 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000764297, whole genome shotgun sequence.
ACCESSION   DASCQP010000200 DASCQP010000000
VERSION     DASCQP010000200.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1793)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1793)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1793
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000764297"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(648..968)
                     /locus_tag="QF480_03395"
     CDS             complement(648..968)
                     /locus_tag="QF480_03395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05636.1"
                     /translation="MYKNKISATQAWSKFLPIFSKNIGYFILYGLFIFVLIILMVICV
                     LLFGLFTCCLGLILLVIPYIGSVVMLPVSYTFRAFSVEFLEQFGDDFVIFPKQEELLE
                     SSSE"
     gene            complement(1194..1598)
                     /locus_tag="QF480_03400"
     CDS             complement(1194..1598)
                     /locus_tag="QF480_03400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05637.1"
                     /translation="MKISYSDPLSRGWNRMKKGLFQPFDIGIWFTLGFTAFLAGLVDG
                     GSPGGGGGNYNKGFKHDRFDWHEFVDYPHIAWSWLLEHSMWFSLIIFGLFFIIAILIV
                     FTWLSSRGKFMFLDNVIHSRAEVVKPWNEYKQ"
BASE COUNT          689 a          312 c          266 g          526 t
ORIGIN      
        1 tttttggaga aatcaaactt gtttgctaaa gcgaaatgaa aaataaaaac acaaattctc
       61 gctagaggat tgggtttcta tgtatgccaa ggactcctct tggggatcat cgtagataat
      121 ccatgatatt tttccaaaaa aagcaaaaac acaaatcctc gctagaggat tgggtttcta
      181 tgcatgccaa ggacacctct tggggataat cgtagataat ccctcttacc attatcaaga
      241 aatttccaga atgaatctcc atatccagaa aaccaaccag attattccaa ttagaaggaa
      301 ggttattttg atatataatc gtttaatttt tatttgaaca gttttgccga taacggtctc
      361 aattgaaaat ttaaggaata gaataacaac acctaataat ataagtggtc cgattatgtg
      421 aaatgcaaat gcttgtgtta tattgagatt agctccagca tgaaatgatc gggttaatcc
      481 acaactcggg caactatatc ctgttatttg tttgatagca cattctgaaa tactataatt
      541 aacaggatca aaataaatag ataatgatat gatcgaaaat aatatcccgg ctaaaaaaaa
      601 acgaacgagc ctttgatcag tttttaattt ggtaattatc ataaaaacta ttcagacgaa
      661 ctttctagca gctcttcttg ttttggaaaa atcacaaaat catcaccaaa ttgttcaagg
      721 aactcaacac taaaagctct aaatgtataa cttaccggca acataaccac agatccaata
      781 tatggaatta ctagaagtat caaccctaaa cagcatgtaa ataatccaaa cagcaataca
      841 caaattacca taagtattat caggacaaaa ataaataagc catatagtat aaaatagcca
      901 atattttttg aaaagattgg aagaaactta gaccatgcct gtgtagcaga gatcttattc
      961 ttatacatta ttggtacaac aaaatcattc aaaaacaacg aaatatacgc catgataatc
     1021 atcaaaatac cgaattgaaa tatcacccca attattgaaa atacacgagc aggtaatgga
     1081 gcataactag taaatatccc aaatagtatt atgccagaaa atataagaga cgaaattatt
     1141 agtatgaagc atataatacc atatattaaa cgccacgtaa agagtgagtt accttattgc
     1201 ttgtattcat tccagggttt aactacttca gcccgactgt ggattacatt atccagaaac
     1261 ataaacttac ctctggaact caaccatgta aatacaatta gtattgcaat tatgaaaaac
     1321 aaaccaaaaa taattagaga aaaccacatt gaatgttcta acaaccagct ccatgctatg
     1381 tgagggtaat caacaaattc atgccaatca aatcgatcat gtttgaaacc tttattatag
     1441 ttcccaccac caccacctgg actacctcca tcaactaatc cggccagaaa agctgtaaag
     1501 ccaagtgtaa accagatacc tatatcaaat ggttgaaata atcccttttt cattcgattc
     1561 catcctcttg aaagaggatc gctataagat attttcattg ttttggattt tattggttat
     1621 taacagcgaa ggtaataaat tttcatcagg atgtgtagac atacagtaag tgatgccaaa
     1681 aaacgaaatt tagttaggtt atgattaatt ataatttact atgtttggct aattgattat
     1741 aaccattagc tgaaaattta aacaatatac tatggaaaat gtaaaatttt atg
//
LOCUS       DASCQP010000201         2274 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000766301, whole genome shotgun sequence.
ACCESSION   DASCQP010000201 DASCQP010000000
VERSION     DASCQP010000201.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2274)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2274)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2274
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000766301"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            32..697
                     /locus_tag="QF480_03405"
     CDS             32..697
                     /locus_tag="QF480_03405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004371129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJN05638.1"
                     /translation="MIIVENIKKSYGSINVLKGINLNIERSEIVSVVGKSGAGKSTLL
                     QIIGTIEKPDTGKIIIDGVNVQLLGNKPLADFRNTKIGFVFQFHHLLPEFTALENICI
                     PAFIAGEAKKSAQKKAIDLLKFLDLSNRSDHKPDALSGGEQQRVAIARALINKPAVIL
                     ADEPSGNLDSSASNDLHNLILNLRKEFGQTFVIASHNKELADMADRKLAITDGIISME
                     NKR"
     gene            836..>2274
                     /locus_tag="QF480_03410"
     CDS             836..>2274
                     /locus_tag="QF480_03410"
                     /inference="COORDINATES: protein motif:HMM:NF024579.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05639.1"
                     /translation="MQAVFNKIIFKLLYKFIAVFFLMFLGFTTFAQKVTTYDEAIIFG
                     DNSYAKANLLDAKAYYQLAIKLKPGDDYAKNKILLIVEKMKTARVAEDEYYDIIDLAD
                     ELYDKNNLVEAIAQYRRALKIIPADEYALTKVREIIKFQTNEKEKIESFGKAMEAGRF
                     YITEKDYDKAINSFREAAGIFPDKDAPISELNVVNNLKAEYEQKLVLVNQKIEEAEKY
                     LMIKNYSEALKIYTEANLILADNEEVMGKITELTPLAENQDKFNKQVEKADEFYIAKD
                     FISARKQYLTAKKLWPEKNYPTDMVEKIDEKLENEKKDLEKNYNQYIVSGDSLMELKE
                     YSQAVGSFNLALNLKPNEAYPKSKLREIDAILAERVKAFEANYDIMISSADSAFNAGL
                     FNIAHDKYKTALEVKPDDKYPKSQLAKIESNLEEIAALEKLNKEYNDLILQADKLYST
                     GNYDLAIKKYREAQALKSIESYPQAKIDA"
BASE COUNT          871 a          359 c          401 g          643 t
ORIGIN      
        1 tagttttatc tttgccgaat acacaaggct gatgattatt gttgaaaaca taaaaaaatc
       61 atacggaagt attaatgtac taaaaggcat taatcttaat attgaacgta gtgaaattgt
      121 atctgtagtt gggaaatcag gagctggtaa gtcaacatta cttcaaataa ttggcactat
      181 cgaaaaacct gacacaggaa aaataattat tgatggagta aatgttcagt tattaggaaa
      241 taaacctctg gctgatttca gaaatacaaa aataggcttt gtctttcaat tccatcacct
      301 tctaccagaa tttacagcat tagaaaatat atgcatacct gcatttattg ccggtgaagc
      361 aaaaaaatca gctcaaaaga aagcgattga tctactaaaa tttcttgacc tttcaaaccg
      421 atcagaccac aaacctgatg ctttgtcagg aggtgaacaa caacgagttg ccatagcaag
      481 agctcttatt aataaacctg ctgttatact cgccgatgaa ccatcgggaa atttagattc
      541 atcagcttct aacgatcttc acaatttaat actaaatctc agaaaagaat tcggacaaac
      601 ttttgtgata gccagtcata ataaagaatt agcagatatg gccgaccgta aacttgcaat
      661 tactgacggt ataatttcta tggaaaataa acgttaattg ttatgtgttt tatgttatta
      721 gttatatgtt aagtgtaaat caaataaaga gagtataaat taatctttgc atttagtcga
      781 ttacatcaaa acaaatgtgg gcaataatta tagattacta ggaataaaat taataatgca
      841 agcagttttc aataaaataa tattcaagct actatataaa tttatagctg tattctttct
      901 aatgttttta ggctttacaa cctttgctca aaaagtaaca acttacgatg aagcaattat
      961 ctttggtgat aatagttatg ccaaagcaaa cttattagac gccaaagcct actaccagct
     1021 agcaataaaa ttaaaacctg gcgacgatta tgctaaaaac aagatattac tcatcgtaga
     1081 aaaaatgaaa accgcaaggg ttgccgaaga tgaatattat gatattattg atcttgctga
     1141 tgagctatac gacaaaaaca atctggttga agcaattgca caatatcgta gagctttaaa
     1201 aattattcct gctgatgaat atgcattaac aaaggttcgc gaaatcatta aattccaaac
     1261 taatgaaaag gaaaagatag agtcgtttgg caaagccatg gaggcaggaa gattctatat
     1321 aaccgaaaag gattatgata aggctattaa cagctttaga gaagctgcgg gcatttttcc
     1381 tgataaagat gcgcctatca gcgaacttaa tgttgttaat aatctaaagg ccgaatacga
     1441 acaaaaatta gttttggtta accagaagat tgaagaagct gaaaaatacc ttatgataaa
     1501 gaactactct gaagctctga aaatctatac tgaagccaat ttaattctag ccgacaatga
     1561 agaagtaatg ggtaagatta cagaattaac accgttggct gagaatcagg ataaatttaa
     1621 caagcaagtt gaaaaggcag atgaatttta tatcgctaaa gactttatct cggcgcgtaa
     1681 acaatattta acagcaaaaa aattgtggcc cgaaaaaaac tatccaactg acatggttga
     1741 gaagatcgat gagaaactgg agaatgagaa aaaagatctt gagaagaatt acaaccaata
     1801 tattgttagt ggagatagtc ttatggaact caaagaatat tctcaggctg ttggtagttt
     1861 caacctggca ctaaacctga aaccaaatga agcttatcca aaatcaaaat tgcgtgagat
     1921 tgacgccatt ttggcagagc gtgtaaaagc atttgaggct aattacgata ttatgatttc
     1981 aagtgctgac agcgcattta atgcaggttt atttaacatc gcacacgata aatataaaac
     2041 tgccctcgaa gttaaacctg atgataaata tcccaaatca caacttgcaa aaattgagag
     2101 taacttagaa gaaatagcag ccctggagaa actaaataaa gagtacaatg atttaattct
     2161 tcaagctgac aaactttata gtactggtaa ttacgatctt gcaattaaga aatatagaga
     2221 agctcaggct ttaaaatcca ttgaaagcta tcctcaggca aaaattgatg ccat
//
LOCUS       DASCQP010000202         2865 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000767937, whole genome shotgun sequence.
ACCESSION   DASCQP010000202 DASCQP010000000
VERSION     DASCQP010000202.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2865)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2865)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2865
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000767937"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1381)
                     /locus_tag="QF480_03415"
     CDS             complement(<1..1381)
                     /locus_tag="QF480_03415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05640.1"
                     /translation="MNLIRASFLNIIIFLILFIPFNNIVAQYYIVGQDPSSIKWLQLN
                     SPDFKIIFPSNYENQAKRYANLLQISHTSISLPYLHQNKKFQVVLHNQSVISNAYVSP
                     TPMHADFFNMPDQTTYAQQWPKQLTLHEYRHVVQMQKLNQGMTKGLYYMFGDQAIGGI
                     MGVFLPMWFIEGDAVFSETIFSKSGRGRSPDFTMDLKAQVLNKKIYPYDKALYGSYRD
                     YVPNHYTLGYELVVNGWINYGPDLWNNTLNNVAQRPYTLVPFTKSIKDITGTGKVKYY
                     KSVLQARKNQWSKIDSTKNDPAIILPENNKDFTSYRFVNPISDGSVIVEKSGIDDINS
                     FVKVFPDGTEEKLFTPGYDFNESLSANDSLLCWNEKTYDPRWSNRDYSAIKIYNYKTK
                     KLKWLTRKSRLFAPSLANKEPKLVAVNASETNNYSLRIYNIESGEILKEFHTLDNLFF
                     MFPRWSDDDK"
     gene            complement(1440..2147)
                     /locus_tag="QF480_03420"
     CDS             complement(1440..2147)
                     /locus_tag="QF480_03420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008143959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pseudouridine synthase"
                     /protein_id="HJN05641.1"
                     /translation="MTTITTNKYPLSTRVLYEDNHLIVVNKLPSEIVQGDKTGDTPLS
                     EIVKAYLKEKYQKPGNVFTGVIHRIDRPASGVVVFARTGKALTRMNELVKNRDLKKIY
                     WAIVQNKPEKLNAELKHYLVRNSKKNKSFAYSKSVTGSKEGVLRYKLIGESDSYYLLE
                     IDLKTGRHHQIRAQLAAIGNPIKGDLKYGSPRSNKDASISLHAHSLEFMHPVKKEILK
                     IVASPPKDPLWDYFSNL"
     gene            complement(2243..>2865)
                     /gene="panB"
                     /locus_tag="QF480_03425"
     CDS             complement(2243..>2865)
                     /gene="panB"
                     /locus_tag="QF480_03425"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009597956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003864 - 3-methyl-2-oxobutanoate
                     hydroxymethyltransferase activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HJN05642.1"
                     /translation="ITLDQMIYHASSVMRAVERALVVVDMPFGTYQGNSKEALNSAIR
                     IMKESGANAIKMEGGEEILESIDRILSAGIPVLGHLGLTPQSINKFGTYVVRATEPEE
                     AEKLKRDAKILESAGCFGVVLEKIPSQLAADVTNAISIPTIGIGAGPEVDGQVLVLHD
                     MLGINQDFSPRFLRRYHNLHDEMIKAFESYIDDVKEMKFPNKKEQY"
BASE COUNT          847 a          527 c          491 g         1000 t
ORIGIN      
        1 gtttatcatc atcagaccat cgtggaaaca taaagaataa gttgtcaagg gtatgaaact
       61 ccttaagaat ttcacctgac tcaatattat atatccttag ggaatagtta tttgtttcgc
      121 tggcatttac tgctactaat tttggttctt tgttagctaa tgaaggggca aacaacctgc
      181 tttttctggt caaccatttt agtttcttgg tcttataatt ataaatctta atagccgaat
      241 agtctcggtt tgaccatcgt gggtcataag ttttttcatt ccagcataat agactatcgt
      301 ttgccgaaag tgattcgttg aaatcatagc caggtgtaaa cagcttctct tcagtaccat
      361 caggaaacac ctttacaaaa ctattaatat catcaatccc actcttttca acaataacac
      421 taccatcaga tatcgggtta acaaagcggt aactcgtaaa atccttatta ttttcaggaa
      481 gaataatggc aggatcattt ttagtggaat caatttttga ccactgattt tttcgagctt
      541 gtagtacact tttatagtat ttcacttttc ctgtgccagt aatgtctttt attgattttg
      601 taaaaggaac taacgtgtac ggtcgttgag caacattatt caaagtatta ttccaaagat
      661 caggaccata atttatccat ccattaacca caagttcata gccaagtgta taatgattag
      721 gtacataatc gcgatacgat ccataaagtg ctttatcgta aggataaatc tttttattca
      781 atacctgtgc tttaaggtcc attgtaaaat caggagatct gcctctgccg cttttgctga
      841 aaatagtttc actaaaaact gcatcacctt caataaacca cattggcaaa aacacaccca
      901 taatccctcc aatagcttga tccccaaaca tataatatag accttttgtc atcccctgat
      961 ttaacttttg catttgtact acatgtctgt attcatgaag agttagctgt tttggccatt
     1021 gttgtgcgta ggtagtttga tctggcatgt taaaaaaatc ggcatgcata ggggtgggcg
     1081 aaacatatgc atttgatatc actgactggt tatgaagtac tacttgaaac tttttgttct
     1141 gatgtaaata tggtaaactg atacttgtat gcgatatctg aagcagattt gcatatcgtt
     1201 ttgcctgatt ttcataattt gatggaaaga ttattttaaa atcaggtgaa tttagttgta
     1261 gccattttat tgatgaagga tcttgcccga cgatataata ctgagccacg atattattaa
     1321 aaggaataaa taaaatcaga aatattatta tatttaaaaa ggaagctctg attaaattca
     1381 tggatcaaat atataggatt tttcgtgatg gttttgatgg gtgtcttaca gctgaaggat
     1441 tataaattag aaaaataatc ccacaatgga tctttaggag gactagctac aatttttaaa
     1501 atttcttttt ttactggatg cataaactct agtgaatgag catgaagact gattgaggca
     1561 tccttattgc ttcgtggaga tccatatttt aaatctccct ttattggatt gccaatagca
     1621 gccaattgag ctctgatttg atgatgacgg cctgttttta aatcaatttc cagcaagtag
     1681 taactatcac tttcgcctat taatttatat cttaatactc cttcctttga tccagttaca
     1741 gatttagagt atgcaaatga tttatttttc ttgctgttgc gaaccaagta atgcttcagt
     1801 tcggcgttga gtttctcagg tttattttga actattgccc aatatatttt tttaagatca
     1861 cgatttttta ccaattcatt cattctggta agagcttttc ctgttctcgc aaaaactact
     1921 acaccacttg ccggacgatc gatccgatga attacccccg taaaaacgtt acctggtttc
     1981 tgatattttt ctttcagata tgctttaact atttcactta aaggagtatc gccagtttta
     2041 tcaccttgaa caatttcaga aggaagtttg tttactacga tgaggtggtt gtcttcgtaa
     2101 agtaccctgg tggatagagg atatttattg gttgttattg ttgtcatggt tgtcgtcgtt
     2161 gtcaatggtt gtcattgtag ttaacggtta ttatcatttt ataggattat aaacatgaca
     2221 acctgataac ccgacaactt ctctaatact gctctttttt atttgggaac ttcatttcct
     2281 tcacatcatc tatgtaggac tcaaaagctt tgatcatttc atcgtgcaaa ttgtgataac
     2341 gtctaaggaa tcggggagag aaatcctgat taataccaag catatcatgc aacacaagta
     2401 cttgcccatc aacttccggt ccggcaccaa tgcctattgt gggaattgaa attgcattag
     2461 tgacatcagc agctagttgt gaaggaattt tctcaagaac cacaccaaaa caaccggcac
     2521 tttctaaaat tttagcatct ctttttaact tctctgcttc ttcaggttca gtggcacgaa
     2581 caacataagt tccaaattta tttatagatt gaggtgttaa acccaaatgt cctagtactg
     2641 gtattccagc acttaatatt ctatcgattg attccagaat ttcttcacca ccttccattt
     2701 ttatagcatt tgcacccgac tctttcatta ttcgaattgc cgaatttaaa gcttcttttg
     2761 agttgccctg atatgttcca aaaggcatgt caacaacaac taaggctctt tcaacggcac
     2821 gcataaccga agatgcatga tatatcattt ggtcgagggt tatgg
//
LOCUS       DASCQP010000203         4317 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000773116, whole genome shotgun sequence.
ACCESSION   DASCQP010000203 DASCQP010000000
VERSION     DASCQP010000203.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4317)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4317)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4317
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000773116"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            196..1224
                     /gene="lpxD"
                     /locus_tag="QF480_03430"
     CDS             196..1224
                     /gene="lpxD"
                     /locus_tag="QF480_03430"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014224730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HJN05643.1"
                     /translation="MRFSAQEIATALNGTVEGNPNTEVTNVSKIEEGVPGTLSFIANP
                     KYATYIYDTKASIVLVNNDFKLEKPFSTTLVRVKDAYSSFATLLEMYQQSKAKRTGIS
                     KKASIAESALIGKDAFIGDFVVIGENTVIGDNCSIFPNTTIGYNCKIGDDSLIYSGVN
                     IYDDSLIGNECTIHAGVVIGSDGFGFAPLENSKYQKIPQIGNVILEDKVEIGAHTTID
                     RATMGSTIIRKGAKIDNLVQIAHNVIIGENTIIAAQSGISGSTKIGKNCLIGGQVGII
                     GHLEIADGVMIAAQSGVGKSIKEANTMHEGSPSFAIRDFQRSYIHFRRFDKLVKQVND
                     LERITKKK"
     gene            1447..2844
                     /locus_tag="QF480_03435"
     CDS             1447..2844
                     /locus_tag="QF480_03435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015545756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008759 - UDP-3-O-[3-hydroxymyristoyl]
                     N-acetylglucosamine deacetylase activity [Evidence IEA];
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-3-O-[3-hydroxymyristoyl]
                     N-acetylglucosamine deacetylase/3-hydroxyacyl-ACP
                     dehydratase"
                     /protein_id="HJN05644.1"
                     /translation="MSDKQKTIGSSVTISGTGLHTGQPGEMTFHSAPVNHGIKFRRTD
                     IDSKPIIAADVNFVVNTARGTTLSKNGAKVFTIEHVLAAFMGLGIDNVLVDLNMEEIP
                     IKDGSSKYFIKAIKDAGIVEQNAERKYLIIKEPIVYESPDKSVKLVIEAAKEFSVSVV
                     IDYETDVLGKQEAVINDITEFENEIAPCRTFVFLHELEFLLSNDLIKGGDLNNAIVFV
                     NRDVTQEELDDLAELFDKPKIKIKPNGILNNLDLIFQNEPARHKLLDVIGDLSLLGMP
                     IKGRVTAYRPGHLANTEFAKIIRNNINNSHMLKQPPFDIYADPYYDINDIKNILPHRP
                     PFLLVDKVLKMSDNFIIALKNVSLNEPFFVGHFPDEPIMPGVLQVEAMAQAGGIFVLN
                     QVEQPELYSTYFLKIDDVRFRAKVVPGDVLIFAIELTGPIKRGICSMHGKAYVGDKVV
                     MEGLLVAQIKKNKEK"
     gene            2846..3649
                     /gene="lpxA"
                     /locus_tag="QF480_03440"
     CDS             2846..3649
                     /gene="lpxA"
                     /locus_tag="QF480_03440"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018337507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008780 -
                     acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine
                     O-acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HJN05645.1"
                     /translation="MNQPLAYVHPQAKIAPNVVIEPFVNIEKNVIINEGTWIGSNVTI
                     MEGARIGKNCRIFPGAVISAIPQDLKFDGEETIVKIGNNVTIREFVTINRGTKANTET
                     VIGNNCLLMAYVHIAHDCILGNNVILANAATLAGHIKIGDWAIVGGLAAVHQFVHIGI
                     HSMVSGGSMVRKDVPPYVKAGREPLSFAGVNSIGLRRRGFPSEIINDIQEIYRFLFLK
                     GLNVTQAVRYIERNLTATFERDEILSFIANSQRGIMKGYTRVRDRNLNS"
     gene            3717..4283
                     /gene="efp"
                     /locus_tag="QF480_03445"
     CDS             3717..4283
                     /gene="efp"
                     /locus_tag="QF480_03445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006798782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HJN05646.1"
                     /translation="MATTADFRNGLCIMHNGDLYTISEFQHVKPGKGPAFVRSKLKNV
                     KTGRILTNTFTSGVKIDIQRVERRQYQYLYNEGDTYHFMNSENFEQTFLDKSLIPAPD
                     LLKEGQEVTIAYHSETDSIILCEMPTYVTLEIIYTEPGERGNTATNTFKDATVETKAI
                     VKVPLFINEGDKIKVDTRTGNYSERVKS"
BASE COUNT         1482 a          651 c          855 g         1329 t
ORIGIN      
        1 gatacaaaaa tatccaggct gatactacca tgcgtgaatc aatagcagat agtccaacaa
       61 ttgaagacgc taacaaggaa taatattaat cgttatagac tatagattag cgatttcaga
      121 tttatcattt tatttggtat taattccatt tgagataagg acgtaagtta atcaatgtat
      181 ttaacagggt tttgtatgag atttagcgca caagaaatag ctactgctct taatggtaca
      241 gtggaaggta acccaaatac agaggttact aacgtttcca agattgagga aggtgtacca
      301 ggcacattaa gttttatagc taaccctaaa tatgcaacat atatttatga tacaaaggcc
      361 tccattgtac ttgtaaataa tgattttaaa cttgaaaaac ctttttcaac aactttggtt
      421 agggttaagg atgcatactc atcatttgct actttgctag agatgtatca acaatctaaa
      481 gctaaacgaa caggtatctc taagaaagca agtattgcag aatctgctct aattggtaaa
      541 gatgccttta taggagactt tgttgtaatt ggagaaaaca ctgtaatcgg tgataattgt
      601 agtattttcc caaatacaac cattggttat aattgtaaaa ttggtgatga ttctcttatt
      661 tattcaggtg taaacattta tgatgacagc cttattggta acgaatgtac catacatgct
      721 ggtgttgtta ttggatctga cggctttggt tttgcacctt tggaaaatag taaatatcaa
      781 aagatacctc aaattggaaa tgtaatactt gaagacaaag ttgaaatagg agctcatact
      841 acaatcgata gagcaacaat gggttcaaca attattcgca aaggtgcaaa aattgataat
      901 ttggttcaaa ttgcacataa tgttataatt ggtgaaaata ctattattgc tgctcaatca
      961 ggaatatcag gatctacaaa gattggtaag aattgcctga taggtgggca ggttggaata
     1021 atcggtcatt tggaaattgc tgatggggtt atgatagcag cacagtctgg agtaggcaag
     1081 agtattaagg aagccaatac aatgcatgaa ggatcaccat catttgcaat acgtgatttt
     1141 cagcgctcat atattcactt tcggaggttt gataaactgg ttaaacaagt taacgatctt
     1201 gagcgcataa ctaagaaaaa ataagtataa ttgttttgtt aagcactcta gtgtcgagat
     1261 tccattttag ataattgctt aaagtgaacc gataaaataa caagttctcg ccatttattt
     1321 ttactccttt gatatatgaa taaggactgc tgataatcac tacaatttta gggtttatgg
     1381 caaatttgat tatttttgcg aaaatctatt ccgacggcta tcggaatgaa aacttctaat
     1441 tattaaatgt ctgataaaca aaagacaata ggtagttcgg taacaattag tggaacagga
     1501 ctacacactg gtcagcctgg agagatgaca ttccatagtg ccccggtaaa ccatggtatt
     1561 aaatttcgga gaacagatat tgattcgaag ccaattattg ctgcagatgt taattttgta
     1621 gtcaatactg cacgtggtac aaccctctct aaaaatggcg caaaagtatt tacaattgag
     1681 catgtgttgg cggcttttat gggattgggt attgataacg tactggtcga tttaaacatg
     1741 gaagagattc caatcaagga tggctcctct aaatatttta taaaggcgat taaggatgct
     1801 ggaatagttg agcagaatgc tgagaggaaa tacttaatta ttaaagaacc aattgtttat
     1861 gagtctcctg acaaaagtgt taaattagta attgaagcag ctaaagaatt ctcggtatcg
     1921 gtagtaattg attatgagac cgatgtatta ggaaaacaag aagctgtaat caatgatatt
     1981 actgagtttg agaatgaaat tgccccgtgc agaacttttg tatttcttca cgaactggag
     2041 tttttgttaa gcaacgacct tattaaaggt ggcgatttga ataatgcaat tgtttttgta
     2101 aacagagatg taacccagga agaacttgat gatctggctg aactttttga caaaccaaaa
     2161 atcaagatta aaccaaatgg aatacttaat aaccttgatc ttatttttca gaatgaacct
     2221 gcgcggcata agctcttaga tgtaattgga gatttgtctc tactgggcat gccaattaaa
     2281 ggtcgtgtaa cagcatacag acctggacat cttgccaata ctgaatttgc gaaaataata
     2341 cgaaacaata taaataattc tcatatgtta aagcaacctc cttttgatat ttatgccgat
     2401 ccttattacg atataaatga tatcaaaaat atacttcctc accgtccacc atttttactg
     2461 gttgataagg tgttgaaaat gagtgataat ttcatcattg ctctaaaaaa tgtttctctt
     2521 aacgaaccat tttttgtcgg ccatttccct gatgaaccta ttatgccagg tgttctacag
     2581 gttgaagcaa tggcacaagc tggtggcata tttgtgctta atcaagttga gcaacccgaa
     2641 ttatattcaa catattttct taaaatagat gatgtgagat ttagagcaaa agttgttcca
     2701 ggtgatgtac ttatttttgc aattgaattg acaggtccga ttaaaagagg aatttgttct
     2761 atgcatggaa aagcttatgt tggagataaa gtggtaatgg aaggccttct tgtagcccag
     2821 attaaaaaaa ataaagaaaa gtagtatgaa ccaaccactt gcatatgttc atcctcaggc
     2881 aaaaattgca cctaatgttg taattgagcc ctttgtgaat attgaaaaaa atgtaataat
     2941 taatgaggga acctggattg gttctaacgt tactattatg gaaggtgccc gaattggaaa
     3001 aaactgccgg atatttcctg gtgcggttat ttctgctatc ccacaagatc taaaatttga
     3061 tggcgaagaa acaattgtta agattggtaa taatgtaact ataagagaat ttgttacaat
     3121 aaaccgtggc acaaaggcaa acacagaaac cgttattggt aataattgtt tgttaatggc
     3181 ttatgttcat atagctcatg attgtatttt aggaaacaac gtaattctag caaatgcagc
     3241 tactcttgcc ggacatatca aaattggtga ctgggccatt gtagggggac ttgcagctgt
     3301 tcatcagttt gtacacattg gtatacactc tatggtttca ggcggaagca tggtgcgtaa
     3361 agatgttcct ccctacgtca aggctggacg tgagccactt tcttttgcag gagtaaactc
     3421 aattggatta aggagaaggg gattcccaag cgagataatt aacgatattc aggaaatata
     3481 tcgttttcta ttcctaaaag gattaaatgt tacacaggct gttcgataca ttgaaagaaa
     3541 cctcacagca acttttgaaa gggacgagat attaagtttt attgctaatt cacaacgtgg
     3601 tattatgaaa ggttatacaa gagtaagaga tagaaacttg aactcataga tgataaatat
     3661 ggagctgaag ttagaggatt gaaatataat atttccaatt taaattattg ttataaatgg
     3721 caacaacagc agattttaga aacggacttt gcataatgca taatggtgac ctatatacta
     3781 tttcagagtt tcaacatgta aagcccggga aaggtcctgc ttttgtgcgt tcaaagctaa
     3841 agaacgttaa aacaggcaga atccttacaa acacatttac gtcgggtgta aaaatagata
     3901 ttcagcgagt tgagagaagg caatatcagt atttgtataa tgaaggggat acctatcatt
     3961 ttatgaattc ggaaaatttt gagcaaacct ttttagataa atctttaata ccggcaccag
     4021 atttattaaa agagggacaa gaagttacaa ttgcttatca ttctgaaacg gattcgatta
     4081 ttttatgtga aatgccaact tatgtaactc tcgaaattat ttacacggag cctggtgaaa
     4141 ggggaaatac tgcaactaat acatttaaag atgcaactgt tgaaacgaaa gcaattgtaa
     4201 aggtaccatt gttcataaac gaaggtgaca aaataaaagt tgatacacgt actggaaatt
     4261 attcagaaag agttaagtca taaactatat ggatttccac aaacccttga aattaat
//
LOCUS       DASCQP010000204         3599 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000778822, whole genome shotgun sequence.
ACCESSION   DASCQP010000204 DASCQP010000000
VERSION     DASCQP010000204.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3599)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3599)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3599
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000778822"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..704)
                     /locus_tag="QF480_03450"
     CDS             complement(<1..704)
                     /locus_tag="QF480_03450"
                     /inference="COORDINATES: protein motif:HMM:NF014051.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HJN05647.1"
                     /translation="MAKRRFLRDFIGVLNSNVFSIICGVLVVILLTRILGVDGFGLYY
                     ALLVIPIIVVSLTHLGVRGASIYMIGQKKYSDDAIVSSVIFILLFTSILGILFSIGAY
                     FIFYEPEYTILLIGLVILIIPFRLGIVYIGGIFFGKDEIKEANRLEWAINLINLILAI
                     ILVWGLDLGLLGAIISLTTANILVAIWAFLLINQKFNISFRLIPQIVKKLLSLGIMYA
                     FTFFVVQLNYRLDILLL"
     gene            836..1360
                     /locus_tag="QF480_03455"
     CDS             836..1360
                     /locus_tag="QF480_03455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05648.1"
                     /translation="MSEIIMSEHSKAQAEMIADIIIQRPELLDELLEIIFSDKEPLSR
                     RAAWPLRFIHEKDEQLLISCLPTLITNLPKVKSVAVQRNLLYVLAYSEVKQSHHSELL
                     QFSSELLLDSGTSVASLVYSMDIFYKIASCEPDLLNELVLIIHQILPNATAGVKSKSM
                     KILRKIEKSGQKFI"
     gene            1417..2253
                     /locus_tag="QF480_03460"
     CDS             1417..2253
                     /locus_tag="QF480_03460"
                     /inference="COORDINATES: protein motif:HMM:NF024899.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S1-like domain-containing RNA-binding protein"
                     /protein_id="HJN05649.1"
                     /translation="MIPGEFNLLKAKRRTLNGYYLIDNEEVEVLLPNKYVPTGMKPGD
                     EISVFIFKDSEDRLTATTIKPKILLNEFGVLEVVDVNPVGAFLDWGLEKDLLVPYSEQ
                     VEKMKVGRSYPVYLYMDNKTQRLVATGKINRILEREEIQVDEGEEVELLICNSTDIGI
                     NVIINNLHPGLLYDNELFQAVTPGDIVTGYIKNIRPDKKIDVSLQKQGYINVEPNAQK
                     ILQNLKDNNGFLNVTDKSDPIIILAKLEMSKKLFKKAIGSLYKQRLIRIEKDGIYLVE
                     SA"
     gene            complement(2259..2783)
                     /locus_tag="QF480_03465"
     CDS             complement(2259..2783)
                     /locus_tag="QF480_03465"
                     /EC_number="3.1.1.106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018027668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetyl-ADP-ribose deacetylase"
                     /protein_id="HJN05650.1"
                     /translation="MNLNNRIKLVKDDITKLHVDAIINAANSRLGGGGGVDGAIHRAA
                     GPELSIACRKLNGCNTGSSKITSGYNLPAKYIIHTVGPIWRGGNSNEPQLLESCYNVS
                     LEIAVQNNIKSIAFPNISTGIYGFPKPEAAKIAIDTVSSFLRMNQLPEQVSFVCFDEQ
                     NYTLYKEILSIIKC"
     gene            complement(2820..>3599)
                     /locus_tag="QF480_03470"
     CDS             complement(2820..>3599)
                     /locus_tag="QF480_03470"
                     /inference="COORDINATES: protein motif:HMM:NF014062.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HJN05651.1"
                     /translation="NFCRAEVEDMDELLQHAGYNDYVFIEHKITATDKIIGWLINPMV
                     SGLLIMVIIGGIYFELQSPGVGFPLAASVFAALLYFAPHYLEGLANNWEILLFVFGLI
                     LLAIEIFAIPGFGILGLLGIIFMISGLTLSMVGNVGPGFFEIDTTGIVAAFSIVIIAF
                     FLAIFGSIMLSKKLFTTNIFGHLALDKVQNIKEGYTSALKSYEDMVGKTGVAYTVLRP
                     SGKVIINDELFDATARSGMIEKGNEVIIYDYKNAQLIVEKK"
BASE COUNT         1252 a          629 c          618 g         1100 t
ORIGIN      
        1 agcaataata tgtcaagccg ataattcaac tgaacaacga aaaatgtaaa tgcatacata
       61 atccctaaac tcaataattt tttaactatc tgcgggatta gtctgaagct gatattaaat
      121 ttttggttga tgagtagaaa tgcccaaatt gcaactaata tattagctgt tgttagtgaa
      181 attatcgctc cgagtaaacc aagatcaagt ccccaaacaa gaattatagc aagaattaga
      241 tttattaaat taatagccca ttcaagtctg ttagcttctt ttatttcatc ttttccaaaa
      301 aagataccac cgatatatac aatgccaagc cggaaaggaa taataaggat tacaagacca
      361 attagcagaa ttgtatattc gggttcataa aatatgaaat atgcaccaat actaaataga
      421 atcccaagaa tactggtgaa gagaaggata aaaataacag aggatacaat tgcatcgtca
      481 ctgtactttt tttgccctat catatagatg gaagcaccac ggacacctag atgggtgagg
      541 cttacaacaa ttataggtat aacaagcaat gcataataca agccaaaacc gtctactcct
      601 aaaatgcggg taagcagtat cacaacaagt actccacaaa ttatagaaaa tacattgcta
      661 ttcagtacac cgataaagtc tcttaagaat cgtcttttag ccatgagtaa tattgaatgg
      721 taaaagcatt atagccgcaa agaacgtaaa attatactaa atgtaattct tcatctccaa
      781 tattaaataa ttatttttgt aacactaaaa tgtggaatta aaatgcaata tgagtttgtc
      841 tgaaataata atgagtgagc attcaaaagc acaggcagaa atgatagctg atatcattat
      901 tcagagacct gagttgttag acgaattatt agaaattatt ttttctgaca aagaaccact
      961 ttcacgacgt gctgcatggc cattaagatt cattcacgaa aaagatgaac aattattaat
     1021 atcatgtttg ccaacgctga taacgaatct cccaaaggta aaaagtgtag ctgttcagcg
     1081 taatttatta tatgttctgg cttattccga agttaaacaa tctcatcata gtgaattatt
     1141 gcaattctct tcagagcttc tactcgattc aggaacatca gttgcttcgc ttgtttattc
     1201 aatggatata ttctataaaa tagcctcatg tgagcctgat ttgttaaatg aattagttct
     1261 tattattcat cagattctcc cgaatgccac ggctggtgta aaatcaaaat caatgaagat
     1321 tttaagaaag attgaaaaat caggtcaaaa attcatataa ttttctaacc aattaaaact
     1381 aattttgccg tttcaatata acaaaggtaa ataaccatga ttccaggaga atttaattta
     1441 ttaaaggcca aacgtagaac gctgaatggt tattatctta tagataatga ggaagttgaa
     1501 gtattgttac caaataaata tgtcccaaca gggatgaaac ctggtgatga aatatcagta
     1561 tttattttta aagattcgga ggacaggtta acagccacta caattaaacc aaaaatattg
     1621 ttaaatgaat ttggagttct ggaggtagta gatgtgaatc cagttggtgc tttccttgat
     1681 tggggtcttg aaaaggatct gttagtgccc tattcagaac aagttgagaa aatgaaggtt
     1741 ggcagaagtt atccggttta tttatatatg gataataaaa ctcaaagact tgtcgcgaca
     1801 ggcaaaataa acaggatact tgaacgagag gaaatacaag tcgatgaagg agaggaagtg
     1861 gagttgttga tatgcaattc aaccgatatt ggtataaatg ttatcattaa taatttacac
     1921 cccggacttc tttacgataa tgaactcttt caagctgtta cgcctggcga tattgttacc
     1981 ggatatataa agaatatccg accggataaa aagattgatg ttagtcttca aaaacaagga
     2041 tatattaacg tagagccaaa tgcacaaaag atactccaga acctgaagga caataatggt
     2101 tttttaaatg ttacagacaa aagcgaccct attattattt tggctaaact agagatgagc
     2161 aaaaaacttt tcaaaaaagc tattggttct ttgtataaac aaaggcttat tcggattgag
     2221 aaggatggta tttatctagt tgagtctgcc tgaagcgatc agcattttat tatacttaat
     2281 atttctttgt aaagagtgta attttgctca tcaaaacaaa caaaagaaac ttgttctgga
     2341 agttggttca ttctaagaaa agatgaaaca gtatcaattg caatcttagc agcttcaggc
     2401 tttggaaagc cataaatacc tgtgcttatg ttcggaaaag caatagattt tatattgttt
     2461 tgtactgcaa tctcaaggct aacattataa cagctttcga gaagttgtgg ttcatttgaa
     2521 ttgccaccgc gccaaatcgg tcccactgta tgaatgatat attttgcagg tagattatat
     2581 cctgaggtta ttttagatga gccggtatta caaccattaa gttttctgca tgctatagat
     2641 aattccggtc cagcagcccg gtgaatagcc ccatctacac caccacctcc cccaagtctg
     2701 ctgtttgctg cattaataat tgcgtctaca tgtaattttg taatgtcatc tttaactagc
     2761 ttgattctgt tgttgagatt catattaatc acaattaatc attcaccaac aaaccgtaat
     2821 tatttctttt ctacaattag ctgagcattt ttgtaatcat aaataataac ttcgtttccc
     2881 ttctcaatca ttcctgatct tgcagtagcg tcaaaaagtt catcattaat aataaccttg
     2941 cctgatggac gaagcactgt gtatgctact ccggttttcc caaccatgtc ttcatagctc
     3001 tttaacgctg aggtataacc ttcttttata ttttgcactt tgtccaaagc gaggtgaccg
     3061 aatatattag ttgtaaatag ctttttacta agcattattg agccgaagat tgccagaaag
     3121 aaggcaataa tgactattga aaatgcagca acaatacctg ttgtatcgat ttcaaaaaat
     3181 ccaggcccaa cattcccaac catacttaat gttagccccg aaatcatgaa tattatgcca
     3241 aggagcccta atattccaaa gcctgggatc gcaaatattt ctattgcaag cagtatcagt
     3301 ccaaatacaa atagtaaaat ttcccagtta ttggccaagc cctctagata atgtggagcg
     3361 aagtagagta gagcagcaaa cacggatgca gcaagaggga aaccaactcc tggagattgt
     3421 aattcaaaat aaattcctcc aattatcacc ataattaata gcccgctgac cattgggttg
     3481 attagccacc caattatttt atcagttgct gttattttat gctcaataaa cacatagtca
     3541 ttgtaacctg catgttgcaa tagttcgtcc atgtcctcaa cctcagctct acaaaaatt
//
LOCUS       DASCQP010000205         2962 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000784074, whole genome shotgun sequence.
ACCESSION   DASCQP010000205 DASCQP010000000
VERSION     DASCQP010000205.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2962)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2962)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2962
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000784074"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1278)
                     /locus_tag="QF480_03475"
     CDS             complement(<1..1278)
                     /locus_tag="QF480_03475"
                     /inference="COORDINATES: protein motif:HMM:NF024573.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HJN05652.1"
                     /translation="MLKSLSIVNYALIENIEIGFTEGFSVITGETGAGKSIILGAFSM
                     ILGKRADLNILRNKSKKCVIEGVFDNRNLSLQKFFADNDLDYDNQTIIRREILPSGKS
                     RAFINDTPVNLGLLVYLGNKFVNVHSQHETLQLSDASFQLNVLDDFINKPNLLTKYKN
                     VYERYNSLTSRLEQLIELNNKAIKDEDYLKYQLEELNNVSLNTQDIDELETRAQYLEH
                     AEEIKLALANAESILNNDESSLTNNLSELTKIVGNIQSYLPNVKTIVQRLNSLTIELK
                     DIQDEIEIMNRDDNFDTRELQLVNEKLSAVYSLIHKHHVQTVTELINVKKEYEEKLNS
                     ISSMGEEIEAINNELSTVKKELIENANELHDVRINGCDSFSNAVLTILRQVGMKDAGF
                     VTRIEKLPEFGIAGLDKVQFVFNANLGVEPGEIS"
     gene            complement(1391..2677)
                     /gene="murD"
                     /locus_tag="QF480_03480"
     CDS             complement(1391..2677)
                     /gene="murD"
                     /locus_tag="QF480_03480"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008764 -
                     UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HJN05653.1"
                     /translation="MIELFNSFISDASRVLILGFGKEGRSTYSFLRKQFPGLQLGIAD
                     INSEIEKDTELSNDDKLELYLGSGYLKSLKLFDIIIKSPGIIIGSIDSELVDKITSQT
                     DLFLKCYASQVVGVTGTKGKSTTVSLITHFLKAVGKKTLLIGNIGVPAFDMIDAIEKD
                     TIIVYELSAHQLEYLHRSPHIAVLLNVFPEHLDYFYSYNNYCKAKFNIYKFQNKEDCL
                     IANESLISKIPDRKHRFIEVSHDTYDLKIKKSPLMGDHNIININAALLAANEVGVSIN
                     DAINSLDSFMSLPHRLENIGEFRGITFINDSISTVPESTIAAVKAFGNIDTLILGGYD
                     RRLDYSQLIEFLETSNIRNFIFLGMAGDRMFDIFGTDTTKRLFKANSIESAFKIIVQN
                     TAKGSICLLSPAAASYDQFHNFEHRGDTFKALAVRL"
     gene            complement(2670..>2962)
                     /locus_tag="QF480_03485"
     CDS             complement(2670..>2962)
                     /locus_tag="QF480_03485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05654.1"
                     /translation="YIFGKDLMNEISLSETFKELTGVSDVKPFECVGTPDEVLAALWK
                     FSQQYQNNPVLLKEMELFDYKEIDYNKLISEYNTEHLIPEEFEIILKNVLND"
BASE COUNT          965 a          546 c          413 g         1038 t
ORIGIN      
        1 actaatttcg ccaggttcaa ctccgagatt agcattaaac acaaactgta ctttatccaa
       61 acccgcaatc ccaaattcag gtaatttttc aattcgcgta acaaatccgg catctttcat
      121 tcctacttgc cttaaaatcg tcaacacagc atttgaaaaa ctatcacatc cgttgatacg
      181 aacatcatgg agctcatttg cattttcgat caattctttt ttaacagtcg acaattcatt
      241 atttatggct tcaatctcct ctcccattga acttatgcta ttcagctttt cttcgtattc
      301 ttttttaaca ttgataagtt cagttacagt ttgaacgtgg tgcttatgaa ttaatgaata
      361 aacagcactc agtttttcgt taacaagctg taattcgcgc gtatcgaaat tatcatctcg
      421 attcattatc tcaatttcat cctgtatatc ctttaactca attgtaagac tatttagtcg
      481 ttgcacaatt gttttaacat ttggtaagta ggactggata tttccaacaa tttttgttag
      541 ttctgagaga ttattagtca aagaactttc atcattattg agtatagatt ctgcatttgc
      601 taaggccagc ttaatttctt cagcatgttc aaggtattgt gccctggttt caagctcatc
      661 aatatcttga gtgtttaatg aaacattgtt caactcttcc aactgatatt ttaaatagtc
      721 ttcgtctttt attgctttat tatttaactc aattaattgt tccaatctgc ttgttaaaga
      781 attatagcgt tcgtaaacat ttttatactt agttaacaaa ttgggtttgt taataaaatc
      841 atccagtaca tttaattgaa atgaagcatc tgataactga agagtttcgt gttgtgagtg
      901 aacattaaca aacttatttc caagataaac caagagccct agattaacag gagtatcatt
      961 aataaatgct cttgattttc cggatggaag tatctcacgt cttattatag tctgattgtc
     1021 ataatcaaga tcgttatcag caaagaactt ttgtaatgac aaatttctat tgtcgaaaac
     1081 accttcgata acacatttct ttgatttatt tctgagaata ttgaggtcag ctcttttacc
     1141 caaaatcatt gaaaatgcac caagtataat agattttcca gctcccgttt cgcctgttat
     1201 aaccgaaaat ccttctgtaa acccaatctc aatattttcg atcaatgcat aattaactat
     1261 ggataaagat tttagcataa aaatgaattc ttatcaggaa tctacaaaac taagaaaaac
     1321 agtttttaaa tttaattttt aaactacaat ttgtcaaaag ctataattaa atatctgact
     1381 taaataaccc ttaaagccta acagctaatg ctttgaatgt atctcctcga tgttcgaaat
     1441 tatggaactg gtcgtaactt gcagccgctg gagacaacaa gcatatactt ccctttgctg
     1501 tattttgaac tattatttta aaagcacttt caattgaatt ggccttaaat aatcttttag
     1561 tagtatctgt gccgaagata tcaaacatcc tgtcgcctgc catcccaaga aaaataaaat
     1621 tacgaatatt cgaagtctca agaaattcaa tcaattgaga ataatccaat ctacggtcgt
     1681 accccccgag aattagagtg tcaatattac cgaatgcctt aacagcagca attgttgatt
     1741 caggcactgt agatatacta tcgttaataa atgtaatgcc tctaaattca ccgatatttt
     1801 ccaaacgatg gggtaagctc ataaagctat ctaatgaatt gatagcgtca ttaatagaca
     1861 cacctacttc atttgcagca agaagtgcag cattaatatt tatgatattg tgatcaccca
     1921 ttaacggtga tttcttaatt ttcaaatcat aggtatcgtg agaaacttca ataaatcgat
     1981 gtttcctgtc tgggatcttg ctaataagag attcattggc aattaagcaa tcttctttgt
     2041 tctgaaattt ataaatattg aattttgctt tacaataatt attgtagcta taaaaataat
     2101 cgagatgttc aggaaataca tttaataata ctgctatatg aggggaccta tgtaaatatt
     2161 ccaactgatg cgctgaaagt tcataaacaa ttattgtgtc tttttctatt gcatcaatca
     2221 tatcgaatgc tggaacacct atatttccta tcagtaaagt ttttttacca actgctttaa
     2281 gaaaatgagt gataaggctg actgtcgtgc tcttaccctt tgttccggtt acaccaacaa
     2341 cctgggaagc ataacatttc aaaaacaaat cagtttgtga cgttatttta tctactaatt
     2401 cactatctat actaccaata attatccccg gagattttat aattatatca aaaagcttaa
     2461 gtgatttcag ataaccactc cccaaatata attccagttt atcgtcattt gataactcag
     2521 tatctttttc gatctcagaa tttatatcgg caattcccag ttgtagccca gggaattgtt
     2581 ttcttagaaa actatatgtc gatcttcctt ctttaccaaa accaagtatc agaactcttg
     2641 atgcatcaga aataaaggaa ttaaacaact caatcattta aaacattttt aagtataatc
     2701 tcaaattctt caggaattag atgctcagta ttatattcgg aaataagttt attataatca
     2761 atctccttgt aatcaaataa ttccatttct tttaacagta ctggattgtt ttggtattgt
     2821 tgtgaaaact tccataaagc tgccaaaact tcatcaggtg tacctacaca ttcaaacggc
     2881 tttacgtcgg aaacacctgt aagctcctta aatgtttcac tgagcgatat ttcattcatt
     2941 aaatctttcc caaaaatata ta
//
LOCUS       DASCQP010000206         2666 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000784088, whole genome shotgun sequence.
ACCESSION   DASCQP010000206 DASCQP010000000
VERSION     DASCQP010000206.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2666)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2666)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2666
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000784088"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1246
                     /locus_tag="QF480_03490"
     CDS             <1..1246
                     /locus_tag="QF480_03490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005649772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HJN05655.1"
                     /translation="YYFIYYHLESGFWYFILQIVFYILVLVFWSPIVTYFSSKHISRW
                     LRIINRFVFAVFYWGFPAVAMYSFYDIYSLSGLVIPMGLIWYLAVAIKNTATNLRKNK
                     VDVNRVKGLFKGIRKIFYRFVLVIPLLGKKKTPFKAVTGVRFHIENGMFGLLGPNGAG
                     KSTLMRVICGILEPSYGQITINGIDLKEKREELQGLIGYLPQEFGMYENMTAWDFLNY
                     IGILKKLYDKDNRNSRVEYVLKAVHMYENKDEKIGSFSGGMKQRIGIAQILLHLPRIL
                     VVDEPTAGLDPRERIRFRNLLVELSKERIVIFSTHIIEDVASSCNRVAVMKTGGVVYL
                     GKPIDMADIAKGKIWTLNMPVSEFEKIRNRLTIIYHIREKDIIKVRCLADEPPVEGAQ
                     SVKANLEDAYLYLLKKNGKVGL"
     gene            1382..2086
                     /locus_tag="QF480_03495"
     CDS             1382..2086
                     /locus_tag="QF480_03495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05656.1"
                     /translation="MTGNKIHLAISMVRYNLKIIFANRFVYFMIAAAAFFLLIIGIML
                     FSEETATEEDIYNTLIFPGLLILFYPVIFNIQNDKDSRMLEIIFSIPNYRYKIYLLRF
                     FISMLLLAVVLLFMTLFTVFTIIQVPVFYMVYQVMYPLFFLACVSFLFTTLVKNASGA
                     AVIMVIIGLFFWIMAEPLEYSKWNLFLNPFNIPSDISYTIWTNIVFQNRLMLVTGSVI
                     SILWTLINLQKREKFV"
     gene            complement(2113..>2666)
                     /locus_tag="QF480_03500"
     CDS             complement(2113..>2666)
                     /locus_tag="QF480_03500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019538030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015558 - secondary active
                     p-aminobenzoyl-glutamate transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1902604 - p-aminobenzoyl-glutamate
                     transmembrane transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="AbgT family transporter"
                     /protein_id="HJN05657.1"
                     /translation="DSDVMNGMASSMKTLATYFVLVFFAAQFVAYFKWSNLGIILAVE
                     GANLLMSANIGLIPLMILFVLLAASINMLMGSASAKWAILAPIFIPMFMIMGYSPELS
                     QVVYRIGDSVTNVISPMMSFFALIIAFVQKYEPKAGIGTIIATMLPYSIAFLFVWIIL
                     LVAWLLLGIPLGPDAGIYYTLPK"
BASE COUNT          902 a          412 c          488 g          864 t
ORIGIN      
        1 atattacttt atttattacc atctcgaaag tggattttgg tattttatat tacagatcgt
       61 tttttacatt cttgttctgg ttttttggtc tccgatagtt acttattttt cttcgaaaca
      121 tattagcagg tggttaagaa taattaaccg atttgtattt gctgtttttt attggggatt
      181 tcctgctgtt gcaatgtata gtttctatga tatttattca ttatccggac tagttattcc
      241 tatgggtctt atctggtatc ttgcagtagc aataaaaaat acagctacta acttgcgcaa
      301 aaataaagtt gatgtaaatc gggtaaaagg attattcaag ggtattagaa aaatattcta
      361 cagatttgtt ttagtgatac ccttgcttgg aaagaaaaag acaccattta aagcagtaac
      421 cggtgttaga ttccatattg aaaatggaat gtttggttta ttgggtccaa atggtgcagg
      481 taagtctact ttaatgcgag taatttgtgg aatattggaa cccagttacg gacaaatcac
      541 aataaatggg atagatctga aagagaaacg tgaagaactt caaggcctta tcggatacct
      601 tccgcaggag tttggaatgt acgaaaacat gactgcatgg gatttcctta attacatagg
      661 cattcttaaa aagctctacg ataaagataa cagaaacagc agggttgaat acgttttgaa
      721 agctgttcat atgtacgaaa ataaagatga aaaaatcggt tcattttcag gtggcatgaa
      781 acaacgtata ggcattgctc aaatattatt acatctacca cgaattttag ttgttgatga
      841 gcccaccgcc ggattggatc caagagaacg tatacgattc aggaacctgt tggttgagct
      901 tagcaaagaa cggattgtta tattttcaac tcatattata gaagatgtag caagttcatg
      961 taacagggtt gccgtaatga aaacaggagg agttgtttat cttggcaagc ctattgacat
     1021 ggcagatatt gctaaaggta aaatttggac acttaatatg cccgtttctg aatttgaaaa
     1081 aataagaaac agattaacaa ttatttatca cattcgcgaa aaggacataa taaaagttag
     1141 atgcttggcg gatgagccac ctgttgaagg agctcaatca gtcaaggcta atttagaaga
     1201 tgcctatttg tatttgctaa agaagaatgg aaaagtggga ttgtgatcag tgaatagctg
     1261 tgggaagaat cttaaagatt taattataaa aaatagagat ccttcgctat cgctcaggat
     1321 aacaaaaaga ggattggaaa gatttcaaat tactaaatta tcataagtta atttataata
     1381 aatgacaggg aacaaaatac atctcgcaat aagtatggtt cggtataacc tgaaaataat
     1441 ttttgcaaac aggtttgtct attttatgat agctgcagct gcattttttt tgcttataat
     1501 aggaatcatg ctcttttcag aagaaacggc aacagaggaa gatatataca atactcttat
     1561 ttttccggga ttgttaatac tattttatcc tgtaatattc aatatacaaa atgacaaaga
     1621 ttcacgaatg ctcgaaataa tttttagtat tccgaattac agatataaaa tataccttct
     1681 tcggtttttt atcagcatgc tattattagc agttgttctc ctttttatga ctctctttac
     1741 agtttttact attattcagg ttccagtctt ttatatggtt tatcaagtaa tgtatccttt
     1801 gttttttcta gcttgtgtat cgtttttgtt tacaacactt gttaaaaatg ctagtggtgc
     1861 agcagtaata atggttataa ttggattgtt cttttggata atggccgaac ctttagaata
     1921 cagcaaatgg aacctgtttt taaacccttt taatatcccc tcagatatta gctatacaat
     1981 ctggacaaac atagtttttc aaaatcgcct tatgttggta acagggtccg taatttcaat
     2041 actgtggaca ttgataaacc ttcaaaaacg agagaagttt gtctaaattt cctattattt
     2101 tttaggataa cactatttag gtaatgtata gtaaatccct gcatcagggc caagcggaat
     2161 acccaataat agccatgcaa ctaaaagtat tatccacaca aataagaaag caattgaata
     2221 tggtaacatt gtagcaataa tagttccaat acctgctttt ggttcgtatt tctgaacaaa
     2281 agcaataatt agagcaaaga aactcatcat tggagaaatt acatttgtaa cactatcacc
     2341 aattctatac acaacctgag ataactcagg agagtaaccc attatcataa acataggaat
     2401 aaaaattgga gcgagtatag cccactttgc agatgcactt cccataagca tatttatgga
     2461 ggctgcaagc aatacgaaaa ggatcatcaa aggtatgagg ccaatgtttg ctgacattag
     2521 gagattcgct ccttcaacag ctaagataat tcctagatta ctccatttga aataagctac
     2581 aaactgagct gcaaaaaata caagaacaaa ataagttgca agtgttttca tcgacgatgc
     2641 catgccgttc ataacatcag aatcat
//
LOCUS       DASCQP010000207         2425 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000784609, whole genome shotgun sequence.
ACCESSION   DASCQP010000207 DASCQP010000000
VERSION     DASCQP010000207.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2425)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2425)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2425
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000784609"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..700)
                     /locus_tag="QF480_03505"
     CDS             complement(<1..700)
                     /locus_tag="QF480_03505"
                     /inference="COORDINATES: protein motif:HMM:NF027441.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4831 family protein"
                     /protein_id="HJN05658.1"
                     /translation="MKKSKIRIFVVSVLLTTFLFQSYSQITVTKIEQRNVTSSNEGFI
                     YTLPQTVFKIDVVYEKIQELKGPLMQYTKEYLGATDYISSDNTEYKFVDINVSVFQES
                     DPGQLYFVQYPIERAKDEKKTSFILSKIGGILAYNAQPPISSTTPDIITDQTFIFEEG
                     DEKFPYMSQYNKQKKTDTIIRVINIDTVTINRFLFKSSWIDKSNKDKAADAAMQIEKI
                     RESRYNLISGYQEVN"
     gene            complement(818..>2425)
                     /locus_tag="QF480_03510"
     CDS             complement(818..>2425)
                     /locus_tag="QF480_03510"
                     /inference="COORDINATES: protein motif:HMM:NF012348.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine synthetase type III"
                     /protein_id="HJN05659.1"
                     /translation="VEVCKYFDKNIEKVYANLGWEQEYFLVDSALFAARPDLVLTGKT
                     VFGHSSAKDQQLSDHYFGTIHNRVLAFMQDLEVESHKMGIPLKTRHNEVAPNQFECAP
                     VYEEVNIAVDHNQLLMHLLDVVARKHNFNVLLHEKPYAGVNGSGKHNNWSIATDTGIN
                     LLSPGKTQDENFRFITVLANILKAVHDNEELVRASIASAGNDLRLGANEAPPAIISVF
                     VGEQITKTLDEIEKMPSRGKMNNRAEKDITVDIPKIPEILFDNTDRNRTSPFAFTGDK
                     FEFRAVGSTDNTAKPMFVLNSIIADQFSKFKSEVDNLIEGGTKKKVALFEVVKQYIKD
                     SKDIRFEGNSYSAEWEIEANKRGLSNHASTPEALRAFVSEKSMKLFERQHVMSKTELE
                     ARYSIKLENYTKKIQIEGRVMGDLATNHILPTAIHYQNRLIENAKGLKDVLDSKSFVK
                     LSKNQLNTIKEISNHISEIKDLVEKMVESRRTANRIQNTYDKALAYKNDVRAYFDEIR
                     KHVDALEMLVDDEMWPLPKYRELLFIK"
BASE COUNT          698 a          427 c          395 g          905 t
ORIGIN      
        1 aattaacttc ctgataacca gatatgagat tatatctact ctccctaatt ttttcaattt
       61 gcatggctgc atccgcggcc ttatctttat tacttttatc gatccatgat gacttaaaca
      121 aaaacctgtt aatagtaaca gtgtcaatgt taattactcg tataatcgtg tccgtttttt
      181 tttgcttgtt atattgagac atgtaaggaa atttttcatc cccttcttca aagatgaaag
      241 tctggtcagt gattatgtct ggagttgtac tagaaatagg cggttgtgca ttataggcta
      301 atattccacc aatttttgaa aggataaaag aagtcttttt ttcatctttg gctctttcaa
      361 taggatattg tacaaagtat agttgtccgg gatctgattc ctgaaatact gaaacattta
      421 tatccacaaa cttgtattct gtattatctg aagaaatata atctgtggct ccaagatact
      481 cctttgtata ttgcattaaa ggacctttaa gctcttggat tttttcgtat acaacatcaa
      541 ttttaaaaac agtttgtgga agtgtatata taaaaccttc atttgaagag gttacatttc
      601 tctgttctat ttttgtaact gttatttggc tataactttg gaataaaaaa gttgtaagta
      661 gaactgaaac aacgaatatg cgaattttag attttttcat gcgcatgaag tttacgatag
      721 ttgttaataa acagtgctta ttttttgggc ctctcactat tggtgtactt caacaaagtg
      781 taagacttag aaatacaaat atagtacttc tatttcatta tttaataaat aacaattccc
      841 tgtacttggg tagaggccac atttcatcat ctaccagcat ttccaaagca tcgacatgct
      901 tcctaatttc atcaaaataa gctcgtacat catttttata tgcaagggct ttgtcataag
      961 tgttttgtat tctgttggca gttcttctgg attcaaccat cttctcaaca aggtccttga
     1021 tttctgaaat atggtttgat atttccttta tagtatttaa ctgatttttg gaaagtttaa
     1081 caaatgattt agagtcgagt acatccttta agcctttggc gttttcaata aggcgatttt
     1141 gataatgtat tgcggtaggt agtatatgat ttgttgcaag atcacccatt actctacctt
     1201 caatctgtat tttttttgtg taattctcca atttaattga ataccttgct tcaagttcag
     1261 tcttcgacat aacatgttgt cgttcaaata gtttcatgct cttttcagaa acaaatgctc
     1321 ttaatgcttc gggagtagag gcatgatttg ataatcccct tttatttgct tctatttccc
     1381 attctgctga atatgaattc ccctcaaagc gtatgtcttt tgaatccttg atatattgtt
     1441 ttacaacttc aaaaagggcc actttctttt ttgtgccacc ttcaattaga ttatcaactt
     1501 ctgacttgaa tttggaaaac tgatctgcga taattgaatt taacacaaac attggtttcg
     1561 cagtattatc ggtagatccc actgccctaa actcaaactt gtcgccggta aaagcaaagg
     1621 gtgatgttct atttctatct gtattatcaa atagaatttc aggaatttta ggtatatcaa
     1681 cagtaatatc tttctcggcc ctgttgttca ttttaccacg tgatggcatt ttttcaatct
     1741 catccagagt ttttgtaatt tgttcaccaa caaaaacgga aataattgca ggaggggctt
     1801 catttgcacc aagtcgtagg tcattaccag ctgatgcaat acttgccctt acaagttctt
     1861 cattatcatg aactgctttt aatatgtttg ctaatacagt aatgaaccta aaattctcat
     1921 cttgtgtttt tccaggtgac aataggttaa tccctgtgtc ggttgctatc gaccagttgt
     1981 tatgttttcc tgatccattt actcctgcat aaggtttttc gtgtagtaat acattaaaat
     2041 tatgttttct tgctactaca tccagtaaat gcataagcag ttggttatga tcaacagcta
     2101 tatttacttc ttcgtataca ggagcacatt caaattgatt tggtgctact tcgttatgtc
     2161 ttgttttgag aggaataccc attttatgtg actcaacttc aaggtcttgc ataaacgcta
     2221 gtactctatt atggattgtt ccaaaataat gatcagaaag ttgttggtcc tttgcagaag
     2281 aatgaccaaa tacagttttt ccagtaagta cgagatctgg acgggcagcg aacagtgctg
     2341 aatctacaag gaaatattct tgttcccaac caagattagc atatactttt tcaatattct
     2401 tgtcaaaata tttacatact tcaac
//
LOCUS       DASCQP010000208         3199 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000788815, whole genome shotgun sequence.
ACCESSION   DASCQP010000208 DASCQP010000000
VERSION     DASCQP010000208.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3199)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3199)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3199
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000788815"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1246)
                     /locus_tag="QF480_03515"
     CDS             complement(<1..1246)
                     /locus_tag="QF480_03515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05660.1"
                     /translation="MKKVYSILTKALILSLVMALSFTSYAQEDTGDKKAEKKSSSFSP
                     YWFVEGEIGPSWSHADLSQYNLAPDLSHTKFNGAIGFGRQLTSVFSAYVDLDCGFFSG
                     EKKNVATLSIPDAKWGRDMRFEADYYGGNINIGINLSNLISGYNERLVDFGIHAGFGQ
                     AQWKSKTYDLTTDAVLSTDGYKGTLSGGTGKGINERNVDYTIPLGFNVNFNVSEKWDI
                     YGDYSYTWMDTDYADGVIHGAQQVKNDVYSHFNIGVRFKFGGNINKKMAANFEKIDLK
                     ATPSPLEERGGTIEVTIKGTFPPKYFGKKAILCFMPVLKYEGGETAFEPMNFKGEDVA
                     GDGTLVSYANGGSFTYSSTIPYDPAMDVSELVVAPVIYTYEGEVYDNCADAEANGSKA
                     FVAPERKIDDGVIHTSQLLRNTA"
     gene            complement(1434..1964)
                     /locus_tag="QF480_03520"
     CDS             complement(1434..1964)
                     /locus_tag="QF480_03520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004293306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HJN05661.1"
                     /translation="MAKKLLLDELNRLSISEFKKASKVPVVIVLDNIRSLSNIGSIFR
                     TADAFRIEAVYLCGITAQPPHREIHKTALSATESVDWHYFSSTKEAVKNLKSENFKII
                     SIEQVDNSIMLNKFLPEPQSKYALIFGNEVNGVGDDIIELSDNCIEIPQHGTKHSFNV
                     SVSVGIILWDIVLKLK"
     gene            2161..3132
                     /locus_tag="QF480_03525"
     CDS             2161..3132
                     /locus_tag="QF480_03525"
                     /inference="COORDINATES: protein motif:HMM:NF017039.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05662.1"
                     /translation="MKQYNNIKAKYPDALLLFRVGDFYETFGEDAIRAAGILNIVLTK
                     RRNGAASFVELAGFPHHSLDTYLPKLVRAGHRVAICDQLEDPKLTKKIVKRGVTELVT
                     PGVTLNDNVLETKENNFLAAVHLTSGISGIALLDISTGEFYLAEGNTEYIDKLIQSFA
                     PSEVVIQRQNRAKFIELMGDKFYLSFFDDWVFSIDFATELLLKHFNTTSLKGFGVDGI
                     NNGIIAAGAALHYLFETHHEKLSHINKLSRIDEGKFVWLDKFTIRNLELIQPLSSGAN
                     TLLEIVDKTDSPMGARLMRRWISLPLKDISSINERLNIVEFLIKMRV"
BASE COUNT         1076 a          580 c          515 g         1028 t
ORIGIN      
        1 gtgcagtatt acgtaataat tgagatgtgt gaattacacc gtcatcaatt tttctttcag
       61 gagcaacaaa tgctttgctt ccattagctt cagcatctgc acaattatcg taaacttcac
      121 cttcgtaagt gtatattact ggagcaacta ccaactcgct aacatccata gcaggatcat
      181 atgggattgt acttgaatat gtaaatgaac caccattagc ataactcaca agggttccat
      241 caccagctac atcttctcct ttaaagttca taggttcaaa tgctgtttcc ccaccttcat
      301 atttcaatac tggcatgaaa cataaaattg cctttttgcc gaaatacttt ggagggaaag
      361 tacctttaat agtaacttca atggtaccac ctctttcttc caatgggctt ggagtagctt
      421 tcagatcaat tttttcaaag ttagcagcca tttttttatt tatgttgcca ccaaacttga
      481 aacgaacacc aatattaaaa tgtgaataaa catcattttt aacctgctgt gcaccgtgta
      541 ttactccgtc agcataatct gtatccatcc aagtgtagga ataatcacca tatatatccc
      601 atttttcact aacattaaag ttgacattaa aaccgagagg aatcgtataa tcaacgtttc
      661 tctcgttaat acccttaccg gtacctcctg ataaagttcc cttgtatcca tctgtactta
      721 atactgcatc agttgttaag tcataggttt ttgacttcca ttgcgcttgt ccaaaaccag
      781 catgtatccc aaagtcaacc aatctctcat tgtatccact tattagatta gataggttta
      841 ttccaatatt aatattaccg ccataataat cggcctcaaa acgcatatct ctaccccatt
      901 ttgcatcagg aatagataat gttgccacat ttttcttttc accactaaag aatccacaat
      961 ccaaatctac gtaagcacta aacactgaag taagttgacg accaaagcca attgctccgt
     1021 tgaacttagt atgacttaaa tcgggtgcaa gattatattg acttaaatcg gcatgagacc
     1081 aagaaggtcc gatttcacct tcaacaaacc aatatggaga aaatgatgaa gattttttct
     1141 ctgctttttt atctccagta tcttcctgag cataagaagt gaaagacaaa gccataacga
     1201 gacttaaaat caaagctttt gttaaaatag aataaacttt tttcatgatc gtaattttta
     1261 ttgtagaatt tatttttcaa atataatcaa taacaatttt ttcaaatagg tcaaaatcaa
     1321 aagatataac aggttacgtg ttaataacgc aaaagtataa aattatgtca ataattgcac
     1381 aaagaacgta gatttttacg tgaataccca ttattagtta caaaaagtac caactatttc
     1441 aattttagaa ctatatccca taatataatt ccaacgctta cgctcacatt aaatgaatgt
     1501 tttgtcccat gctgaggtat ttcaatacaa ttgtcagaca attcaattat atcatcacca
     1561 acaccattaa cctcattacc aaaaattaat gcatatttac tctgtggttc aggcagaaac
     1621 ttattcagca ttatactatt atcaacctgt tctattgaaa taatcttgaa attttcgctt
     1681 tttagatttt ttacagcctc tttagttgag ctgaaataat gccagtcaac agattcggtt
     1741 gcactgagtg ctgttttatg aatttcacga tgagggggtt gcgcagttat cccacataaa
     1801 taaactgcct caatacggaa ggcatcagca gtcctgaata ttgatccaat attactcagg
     1861 cttctgatat tatcgaggac tataactaca ggcacttttg aggctttctt aaattcagaa
     1921 atactcagtc tgtttaactc atcaagtaac agtttttttg ccataacgct caaattgatg
     1981 caaaaataaa gtattgctcc taaattaatt acgattagtg aagatttgtt gaattgttga
     2041 ataaacaata attattacaa atataaagat tacacagtct gtgtatattt gccttgaaat
     2101 tttatggaaa gttaaaattt attcgtggac aaaaaaaaca aatatgtcga aacaccttta
     2161 atgaaacagt ataataacat taaggctaaa tatccagatg ccttgttact gttcagagtt
     2221 ggtgattttt atgaaacttt tggtgaagat gcaattaggg cagccggtat attaaatatt
     2281 gttctgacga aaagaagaaa tggagctgct tcgtttgtgg agcttgcagg ttttccacac
     2341 cactcacttg atacatatct tcccaaattg gtaagagccg gacatagggt tgcaatttgc
     2401 gatcagctcg aagatcctaa gttaaccaag aagatagtga aacgtggagt taccgaactt
     2461 gttactcctg gtgttacatt aaatgataat gtacttgaga caaaagaaaa taattttctt
     2521 gcagcagttc atttaacatc cggaatctca ggaatagcct tattagatat cagcactgga
     2581 gagttttatc ttgcagaagg caatacagaa tacatagata agttgattca gagctttgcc
     2641 cctagtgagg tagtcataca acgacaaaat cgtgctaagt ttatagagtt aatgggcgat
     2701 aaattctatt tgtcattttt cgacgattgg gtattttcaa ttgactttgc taccgaatta
     2761 cttcttaaac atttcaacac aacttcacta aaaggatttg gtgttgatgg aatcaataat
     2821 ggaatcattg cagcgggtgc tgctttgcat tatctgttcg aaacacacca cgaaaaacta
     2881 agtcatataa ataaattaag ccgtatagat gagggaaaat ttgtgtggct cgataagttt
     2941 acaattcgta accttgaatt aatacaacca ttaagtagtg gagctaatac tttattagag
     3001 atagtagata aaacagactc tccaatgggt gcgcgtctta tgagaaggtg gatctcattg
     3061 cctctgaaag atatttcatc aataaatgaa aggttgaata ttgtagaatt tcttataaaa
     3121 atgagagtat aggatcaact cttcacaagg aaataaaaaa aataggtgat cttgaaagac
     3181 taatatctaa agttgttac
//
LOCUS       DASCQP010000209         1569 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000789567, whole genome shotgun sequence.
ACCESSION   DASCQP010000209 DASCQP010000000
VERSION     DASCQP010000209.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1569)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1569)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1569
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000789567"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..875
                     /locus_tag="QF480_03530"
     CDS             <1..875
                     /locus_tag="QF480_03530"
                     /inference="COORDINATES: protein motif:HMM:NF013430.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alanine dehydrogenase"
                     /protein_id="HJN05663.1"
                     /translation="KMIRENQIIYTYLHLAAAKELTEGLIKSKSVCIAYETVTDDNGR
                     LPLLAPMSAVAGRMSVQAGAHSLEKTQKGRGLLLGGAPGVNPATVVILGGGVVGENAA
                     LIATGMRANVFIVDKSSERLKQLQEIFGDKIKPVLSDKAKLKKLIIDCDLLIGGVLIP
                     GAEAPKLVTRDMVKSMKRGSVIVDVAIDQGGCIETSRPTTHGNPTYLVDDVVHYCVAN
                     MPGGVPRTSTLALNKATLPLLVKIADQGYEKTLKENKNYLAGLNVFKGAITCKGVADS
                     FKLKYTPPDKALQN"
     gene            1016..1225
                     /locus_tag="QF480_03535"
     CDS             1016..1225
                     /locus_tag="QF480_03535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05664.1"
                     /translation="MSAEESIRSNGKGKEGYSRILSGTSKVKVDLNNLMRRVKEEEKK
                     TKRNNLLISATALSAVAVFGIILTL"
     gene            1359..>1569
                     /locus_tag="QF480_03540"
     CDS             1359..>1569
                     /locus_tag="QF480_03540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05665.1"
                     /translation="MDELKPLILLISSGLILRYSLTLTGQAWARAHAQTAAFMILPVI
                     TYVITKTIAGNIALSLGMIGALSIVR"
BASE COUNT          537 a          239 c          316 g          477 t
ORIGIN      
        1 ttaaaatgat tagggaaaat caaattattt atacctattt acatttagca gcagctaaag
       61 aattaacaga aggtttaata aaatctaagt cagtatgtat tgcttacgaa acggttaccg
      121 atgacaatgg tcgtttaccc ttattagcac caatgagcgc tgttgcagga cgaatgtcag
      181 ttcaagcggg agcgcattct ttagagaaaa cccaaaaagg cagaggattg cttttaggtg
      241 gtgcgcccgg agtaaatcca gcaactgtag ttattcttgg agggggagtt gtaggagaaa
      301 atgcagcttt aattgcaaca ggtatgagag ctaatgtttt tatagttgat aaatcttctg
      361 aacgtttaaa acaattacaa gaaatatttg gagataaaat taaaccagtt ctgagtgaca
      421 aagcaaaact aaagaaactt ataatagact gcgatctttt aattggcggt gttttaatac
      481 caggggctga agcgccaaaa ttggttacaa gggatatggt taaatcaatg aaaagaggtt
      541 cggttattgt tgatgtagct attgaccaag gaggatgtat tgaaacaagc agacctacta
      601 ctcacggcaa tccaacttat ttggtggatg atgtggttca ctattgtgtg gccaatatgc
      661 ccggaggcgt tccaagaact tcaacacttg cattaaataa agcaacactt cctttgttgg
      721 ttaagatcgc tgaccaaggt tatgaaaaaa ccttaaaaga aaacaagaac tatttggcag
      781 gtttaaatgt ttttaaagga gccatcacct gcaaaggtgt ggcagattca tttaaactaa
      841 aatatacacc tcctgataaa gcattacaaa attaagaaag aaagttacaa cttgtagttc
      901 gtaagactat caattgaatt taaataaccc attttgaaca ttgtttttcg agtttttagt
      961 cattttgatc aaaacagaac tttataaaat cttaagataa tgatttaatc aatctatgag
     1021 tgcggaggaa agtatacgtt ctaacgggaa gggaaaagaa ggatattcaa gaattctgtc
     1081 agggacgtct aaagttaaag ttgacctgaa taacttgatg agaagagtta aggaagaaga
     1141 aaagaaaacc aaaaggaata atttattaat ttctgcaaca gctctttcgg ccgtggctgt
     1201 atttggcata attttaactc tgtaagattt ttatctcaat aaaacctttg tataattgaa
     1261 gagaattcac tgaagatgcg aatcgtgttt tctgtgtcca tcaatatatt gcttgttatg
     1321 ccattttttt attagtataa aaaaagggta acttcatcat ggatgaacta aaaccattga
     1381 tactacttat ctcaagcggg ttaattctca gatattcttt gacattaact gggcaagctt
     1441 gggctagggc tcatgcacaa accgctgcct tcatgatatt gcccgttata acttatgtaa
     1501 ttaccaagac gatagccggc aatattgctt tatctttagg tatgatagga gctttatcta
     1561 tagttcgat
//
LOCUS       DASCQP010000210         2267 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000790943, whole genome shotgun sequence.
ACCESSION   DASCQP010000210 DASCQP010000000
VERSION     DASCQP010000210.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2267)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2267)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2267
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000790943"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            275..346
                     /locus_tag="QF480_03545"
     tRNA            275..346
                     /locus_tag="QF480_03545"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:308..310,aa:Arg,seq:ccg)
     gene            693..1826
                     /locus_tag="QF480_03550"
     CDS             693..1826
                     /locus_tag="QF480_03550"
                     /inference="COORDINATES: protein motif:HMM:NF012798.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HJN05666.1"
                     /translation="MKPKQNIILLNDYHRDKYVILVKFKYDKELINCVKRIEGASWSQ
                     SRKSWYITKDEFDLPVIIDVFRDMADVDYSALTANSKATRIPQPVKKIAKRKVKLPKA
                     YYDMLDQKRYSDSTKATYTNYFEDYIRYFDGRVLEEIPTEEINGYILELIRNKKISAS
                     LQNQHINAIKFYYEKVLGGEKFCLKIDRPRKSKSLPDILTISEIKIMLDVTINIKHKC
                     IISLLYSAGLRRNELINMEIVDILSEQMLIKVRNSKGNKDRYVGLSKHLLQLLRKYVS
                     EYKPKKHLFEGQKGGKYSAGSVIKVVKRSAISAGIIRRVTPHMLRHSFATHHLESGTD
                     LRYIQEFLGHSSTKTTEVYTHVAKTDFSRFKNPLDVMFENVDN"
     gene            1950..>2267
                     /locus_tag="QF480_03555"
     CDS             1950..>2267
                     /locus_tag="QF480_03555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05667.1"
                     /translation="MSLKKLSEKSKEFNLPQENIDKRENGRLSFVSKFPLDKIKDLNI
                     DEYVQGTDENSFCYWLDFKKILFGIGGGNASKFGVYKATDGNYYTSYGKNKKQLTSQD
                     LETF"
BASE COUNT          861 a          323 c          416 g          667 t
ORIGIN      
        1 ccaacaggat caataaaatt aatccctcca gctccacaac aaaaatgagc aacacggagt
       61 gtttggtaat gagctaaaaa cagaatcaag catgcttgaa tgaatgtttt tttgcaaatt
      121 gacaagcaag catagcaagt gaggtttttt tattgtaccc cactccaaca ggatcaataa
      181 aattaatccc tccagctcca caatgtgagt aatgaaatgt gaatggtgat tagtcgattc
      241 agttcacaat tcactaataa ctattcacca atcaggtccc gtagttcaat ggatagaatg
      301 tgagattccg gttctcatga tatgggttcg aatcccgtcg ggatcacaga tgaataaaac
      361 caacctgaaa aggtttggtt ttttagtttt agatggaatc aagtttactt gaattccgta
      421 taaaagtaaa acagccagga tgcgaagcag acaggtttta ttctcaaaat ggaaccctta
      481 gggatcataa aataatcccg tcgggatcac tcttaattga atatatatct aatatacagc
      541 ctattataaa taggggtata aaaagggggt tgaatattta actccctttt tttgtttata
      601 ctatactgga ttctcattaa ttatacctct ataattacaa tgtatcaaaa caaattgtat
      661 atttacttcc tactaaataa ttaacttaaa tcttgaaacc caaacaaaat atcattttgt
      721 taaatgatta tcatcgtgac aaatatgtta tattagttaa gtttaagtat gacaaagaac
      781 tgattaactg cgtaaagaga attgaaggtg ctagttggag tcagagtagg aagagctggt
      841 atattactaa agatgaattt gatttaccag tgattattga tgtttttagg gatatggcag
      901 atgttgatta ttctgcatta actgctaata gcaaggcaac ccgtattcct caaccagtaa
      961 aaaaaatagc aaaacggaaa gtaaagttac ctaaggcata ttatgatatg cttgatcaga
     1021 aaagatatag tgatagtaca aaagccactt acacaaatta ttttgaagat tatatcaggt
     1081 actttgatgg aagggtgtta gaggaaatac ctacagaaga aattaatggc tatatactgg
     1141 aattaatacg taataaaaag atatccgcaa gtctgcaaaa ccagcatatc aatgctatta
     1201 aattttatta tgagaaagtt ttgggaggag aaaagttttg tttaaagatt gacagaccta
     1261 ggaaatcaaa aagtttaccg gatatattga caatatcaga gattaaaata atgcttgatg
     1321 ttaccattaa tatcaaacac aaatgtataa ttagcttgct ttattcggct ggtttaagaa
     1381 gaaacgaatt gattaacatg gagatagtag atatattatc tgaacaaatg ttaataaagg
     1441 tacgtaacag caagggaaat aaagatcgtt atgttggttt atcaaaacat ttacttcagt
     1501 tattaaggaa atatgtcagt gagtataaac caaaaaagca cttattcgaa ggtcaaaaag
     1561 gcggtaaata tagtgctgga agcgttataa aagttgtaaa aagatcagca attagtgctg
     1621 gaataataag aagggtaact ccgcatatgt taagacattc ttttgcaacg catcatttag
     1681 aaagtggtac tgacttaaga tatatccagg aatttcttgg ccacagtagt accaaaacaa
     1741 cggaagttta cacacatgtg gctaaaacag attttagtag attcaagaac cctttagacg
     1801 tgatgtttga aaatgtggat aattaataaa agtacacaat acataccaat atggggtaat
     1861 aagtatacct ttgagcgtgt gggtaaagaa gaaataagtg taagagtaca catacactat
     1921 tgttggcacc aataagaaaa caatactaaa tgagtctaaa aaaattaagt gaaaaatcta
     1981 aggagtttaa ccttcctcaa gaaaatattg acaaaagaga aaatggtaga ctttctttcg
     2041 tttcgaaatt tccccttgat aaaataaaag acttaaatat tgacgaatat gtgcagggga
     2101 ctgatgaaaa cagtttctgc tattggttag attttaaaaa aatactcttt ggaataggcg
     2161 gtggtaatgc ttctaaattt ggtgtgtaca aagcaacaga cggaaactac tatacaagct
     2221 atggtaaaaa caagaaacag cttactagcc aagatcttga aaccttt
//
LOCUS       DASCQP010000211         1643 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000805960, whole genome shotgun sequence.
ACCESSION   DASCQP010000211 DASCQP010000000
VERSION     DASCQP010000211.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1643)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1643)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1643
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000805960"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1643
                     /gene="gcvPB"
                     /locus_tag="QF480_03560"
     CDS             <1..>1643
                     /gene="gcvPB"
                     /locus_tag="QF480_03560"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: protein motif:HMM:NF003346.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006546 - glycine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase
                     subunit GcvPB"
                     /protein_id="HJN05668.1"
                     /translation="KLAKSFADKIKKSGYELYSDSFFDTVTILTKNKTQNIYKNALRN
                     GVNLRVVDDNMLSIAFDERKTIEKTNELLKIFNSAESINRTGKVVLNNIPKNLVRTSK
                     YLQHPVFNSYHSETEMTRYLKKLEDSDIALNRSMISLGSCTMKLNAVSEMIPVTWNEF
                     YEPHPFAPVEQMEGYRYLFTDLKNWLREITGFSGVSLQPNAGAQGEYAGLMVIRKYHL
                     ENGENNRNICLIPSSAHGTNPASAQMAGMKVVVIGCDKDGNIDLSELKSKVRQYSKNL
                     STLMVTYPSTHGVFEEEIKEICSTVHDNGGQVYMDGANLNALVGIAKPGKFGPDVCHI
                     NLHKTFCIPHGGGGPGMGPIACKKHLDPFLPKHEVIKDCGPTTGIGAVSAAPWGSSSI
                     LVISWMYIKMMGAEGLKKASQVAILNANYIARRLNKYFPVLYTGKNGNVAHECIIDIR
                     PIKAETGITEEDIAKRLIDFGFHAPTMSWPVIGTNMTEPTESESLSEIDHFCDTLIKI
                     KEEINKVKSGEFDKVDNPLKNAPHTHVELATNVWKHKYD"
BASE COUNT          582 a          246 c          330 g          485 t
ORIGIN      
        1 aagttagcaa aaagttttgc tgataaaatt aaaaagtcgg gttatgaact ttattctgat
       61 agtttttttg acactgttac cattcttaca aaaaataaaa cccaaaatat ttataaaaat
      121 gctctgagaa acggagttaa tctaagagta gttgatgata atatgttatc cattgctttt
      181 gatgaaagga agacaattga aaagactaac gaacttttaa aaatttttaa tagtgccgag
      241 tcaattaatc gcacaggtaa agttgtatta aataatatac caaagaattt ggtaagaaca
      301 tcaaagtacc ttcagcaccc tgtttttaac tcttatcatt cagaaactga aatgactcga
      361 tatttaaaaa aattagaaga ttcagatatt gctttaaata gatcaatgat ctcattaggt
      421 tcatgtacga tgaagttaaa tgcagtatca gaaatgatcc cggttacttg gaatgaattt
      481 tatgaaccac atccctttgc acccgtagag caaatggagg gatatagata tttattcact
      541 gatttgaaaa attggctgag agaaataact ggtttttcag gagtttcttt acaaccgaat
      601 gcgggtgcac aaggtgaata tgcaggttta atggtaatta gaaaatatca cttggaaaac
      661 ggagaaaata atagaaatat ttgtctcatt ccaagttcag cacacggaac caatccagca
      721 agtgctcaga tggctggtat gaaagtggtt gttattggct gtgacaaaga cggaaatatt
      781 gatcttagtg aattaaaatc taaagtaaga caatattcaa aaaatttatc gactttaatg
      841 gttacttatc catcaactca tggagtgttc gaggaagaaa ttaaagaaat ttgcagtacc
      901 gttcatgata atggtggtca ggtttatatg gatggagcca atcttaacgc gttggttgga
      961 attgctaagc caggaaaatt tggtccggat gtatgccata ttaatttgca caaaactttt
     1021 tgcattcctc atggtggagg tggaccagga atgggaccta ttgcatgcaa gaaacatttg
     1081 gatccttttc ttcccaaaca tgaagtgatc aaagattgtg gtccaacaac tgggatcgga
     1141 gctgtttccg cagcaccctg gggtagctca agtattttgg taatttcatg gatgtatata
     1201 aaaatgatgg gggccgaagg tttaaagaag gcttcccaag tagctatttt aaatgccaat
     1261 tatatagcaa ggagactaaa taaatatttc cctgttctat atactggaaa aaatggaaat
     1321 gttgcccatg agtgtataat tgatattcgt ccaattaaag cagaaacagg tattactgaa
     1381 gaagacatag caaagaggct aatagatttt ggttttcatg caccgaccat gtcttggcca
     1441 gttatcggaa ctaatatgac ggaacccacc gagagtgaaa gtttatcaga gatcgatcat
     1501 ttctgtgata ctttgataaa gatcaaagaa gaaatcaata aagtgaaatc gggagaattt
     1561 gataaagtag ataatcctct gaaaaacgct cctcacacac atgttgaact tgcaacaaat
     1621 gtttggaagc acaaatatga cag
//
LOCUS       DASCQP010000212         3079 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000809830, whole genome shotgun sequence.
ACCESSION   DASCQP010000212 DASCQP010000000
VERSION     DASCQP010000212.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3079)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3079)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3079
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000809830"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..530
                     /locus_tag="QF480_03565"
     CDS             <1..530
                     /locus_tag="QF480_03565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05669.1"
                     /translation="FNDREPDEGHKARFASRLSDSNIAKPKKITIQSFIMIAAALLLL
                     IATSYLILRTVSVGNKNEIHSVTDIVYPQELIKVQNYYDELSVSRLNQIDNHAKSEEE
                     AQKIKVKAQKKMDKLDANLAMIEKEYMKNPQSERLKAAIVVNKKMKAEVAENIVEQLG
                     NAQLGYHAGSMFTNY"
     gene            546..1613
                     /locus_tag="QF480_03570"
     CDS             546..1613
                     /locus_tag="QF480_03570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05670.1"
                     /translation="MKKVLTLSIATLFIFLASGIVANINADEWTEKVVADKKFEINKN
                     AKLVVDHEFGNVRCKNWNQNSISVKVTVKAKTKDAKKVQEIIDRVIVDVDGSKDNVTV
                     ECGLGNKNEKNKSINVTIDIDIYMPSTINLSLEHKFGTAFVESVSGPTKISSEYGSIE
                     IGSLSNSDNELEVMFGEAQINSINKCKLEISYSQLKIQDSKDLSIESEYSDMSIDNSN
                     SIKFELESGNVALGNVNKLDVESTFSNLEVLSLAESFKSEMEYGALEIKNVNKGFAFI
                     SIENTHGTVALNVSKSGSFKFAVEGEFLSFNYPKEYTSISEKSENNFETTIKGVVGKE
                     SNPTSVIKIESVYGSVNFIAK"
     gene            1670..2509
                     /locus_tag="QF480_03575"
     CDS             1670..2509
                     /locus_tag="QF480_03575"
                     /inference="COORDINATES: protein motif:HMM:NF022441.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head GIN domain-containing protein"
                     /protein_id="HJN05671.1"
                     /translation="MKTQIRRKFKIILTIMLAIIIGTSIAQTRVKGNGKVITEERNTG
                     NFTGIKLTCSADLIISQGSTSVTVKTDENILKFISTKVKDGTLEIGVKKDGFRSATTL
                     EVHISIPNLESIKSLGSGDIDFKGTFKAKDLFIANSGSSDIDGNFDVTNLELKMNGSG
                     DIDLEGIFGTFKVFSSGSGDLEAEGLKLEECYVKCSGSGDIELNGKANNLTVTISGSG
                     DVSAYNLTTVNAIVNSSGSSDVTLNVVEKLQARLSGSGDVTYRGNAKADVTSRGSGEV
                     YKK"
     gene            complement(2613..>3079)
                     /locus_tag="QF480_03580"
     CDS             complement(2613..>3079)
                     /locus_tag="QF480_03580"
                     /inference="COORDINATES: protein motif:HMM:NF023390.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="STAS/SEC14 domain-containing protein"
                     /protein_id="HJN05672.1"
                     /translation="NPKILILDEATSSLDTINPITLTLNFTIMIKILEGASDKAIAIE
                     IIGGYETDDEKSIEKMFEEKISSGMNKVNLLIKIDRMSITHSSWKAMWSDGIYALKNI
                     KHCGHIAVVGDSKVEGFLVKMDNALFGSEKAGRIEKYFNVSDLDKAMGWINE"
BASE COUNT         1123 a          450 c          570 g          936 t
ORIGIN      
        1 ttttcaatga ccgagaacca gatgagggac ataaagcccg gtttgcaagc agattgagtg
       61 atagtaatat agccaaacct aaaaaaatta ctattcaatc atttattatg attgctgctg
      121 ctctgctgct attaattgca acttcttatc tgatcttaag aactgtaagt gttggaaata
      181 aaaatgagat tcattctgta acagatattg tgtatccaca ggagcttata aaggttcaaa
      241 attattatga tgaattatct gtatcccgtc tcaaccaaat tgacaaccat gccaaatcag
      301 aagaagaagc acaaaaaatt aaagttaagg ctcagaaaaa aatggataag cttgatgcca
      361 acctggcaat gatagaaaag gagtatatga aaaatccaca aagcgaaaga ctcaaagctg
      421 caatcgtggt taacaaaaaa atgaaagctg aggtagctga aaatattgtt gagcaattag
      481 gtaatgctca gctaggatat catgcaggaa gcatgtttac taattattaa ttaaaatcgg
      541 aaaaaatgaa aaaagtactt acattgagta tcgcaacact ttttatattt ctggcttcag
      601 gaatagtagc aaatattaat gctgacgaat ggacagagaa agtcgttgcc gataaaaaat
      661 ttgaaatcaa caaaaatgcg aaacttgttg tagatcatga gtttggtaat gttcgttgta
      721 agaattggaa ccaaaattca atatctgtta aagtaacagt aaaagccaaa acaaaagatg
      781 caaagaaagt acaggaaata atcgacagag taattgttga tgttgatggt agtaaagata
      841 acgttaccgt ggagtgtggt ttaggtaaca agaatgaaaa gaataaatca ataaacgtta
      901 ctattgatat agatatctat atgcctagta cgatcaatct ttcactagag cataagtttg
      961 ggacagcttt tgtagaatca gtttcaggtc caacaaaaat ctcaagtgaa tatggaagta
     1021 tagagatagg ttctttaagc aattctgaca atgaactaga agtaatgttt ggtgaagcac
     1081 aaattaatag tatcaacaag tgtaagctcg aaattagcta ttcacagctt aaaatacaag
     1141 attcaaaaga tctctcaatt gaatcagaat attctgatat gtctattgat aactcaaatt
     1201 caattaaatt tgagttagaa agtggaaatg tggctctcgg taatgttaat aaattagatg
     1261 ttgaatctac attctcaaac cttgaagtac taagtcttgc tgagtcgttt aaaagtgaaa
     1321 tggaatatgg agcattggaa ataaagaatg ttaacaaagg ttttgcattt attagtatcg
     1381 aaaacacaca tggtactgtt gcattaaatg taagcaaaag tggttcattc aaatttgctg
     1441 tagaaggtga gttcttaagt tttaattatc cgaaagaata tacaagtatt tctgagaaaa
     1501 gtgagaataa cttcgaaact accattaaag gagttgtagg taaagagtca aatccaactt
     1561 ctgtcattaa gatagaaagt gtatatggct ccgtaaattt tattgccaaa tagtcctcat
     1621 ttagataaaa gatcataaaa aattttataa ttaaataaat tctaaaaaaa tgaaaacaca
     1681 aattcgtaga aaattcaaaa ttatattaac aataatgttg gccattatta ttggtaccag
     1741 cattgcacag actagagtaa aaggcaatgg caaggtaata actgaagaac gaaataccgg
     1801 aaattttacc ggaattaaac ttacctgttc tgctgatcta atcattagcc aaggcagtac
     1861 ttccgttacg gttaaaacag atgaaaacat acttaagttt atttcaacta aagttaagga
     1921 tgggacactt gaaataggag taaagaaaga cggctttagg tctgcaacta ctttagaagt
     1981 acatatttcg attcctaatc tagagagcat aaagagcctt ggatcaggtg atattgactt
     2041 taaaggtaca tttaaagcaa aagatttgtt tatcgctaat agtggttcga gtgatataga
     2101 cggtaacttt gatgttacta acctggaact taagatgaat ggctcaggag atattgattt
     2161 ggagggaata tttggcacct tcaaagtttt tagttccgga tctggtgatt tggaagcaga
     2221 aggtttaaaa ctggaagaat gttatgtaaa atgttcagga tcaggtgata ttgaattgaa
     2281 tggaaaagct aacaacttaa ctgttactat ttcgggttcg ggtgatgtta gcgcatataa
     2341 cctaaccact gtgaatgcaa ttgttaatag ctcaggatct tctgatgtta ctttaaatgt
     2401 agttgaaaaa cttcaagcac gattaagcgg ttccggagac gttacctacc gaggaaacgc
     2461 taaggcagat gtaactagca gaggttcagg agaagtgtat aaaaagtaac actcaactag
     2521 tacttaagac aatatgaaag tcggaagaat tgataacaat tcttccgact ttgtgttttt
     2581 aagaaataca attgaagaca atagtggaag gattattcat ttatccaacc cattgcttta
     2641 tccaagtcag atacattaaa gtatttttca attcttcctg ccttttcact tccgaacaaa
     2701 gcattgtcca ttttaaccag aaagccttcc actttactgt cgccaacaac agcaatatgt
     2761 ccgcagtgtt taatattctt taaagcataa attccatcac tccacatagc tttccagcta
     2821 ctgtgagtaa tactcattct gtcgatttta atgagaaggt tgaccttatt cattcctgat
     2881 gaaatttttt cctcaaacat tttctcgatt gacttttcat catctgtttc gtaaccacca
     2941 attatttcaa tggcgattgc tttgtctgac gctccttcta aaattttaat cataatggta
     3001 aaatttaaag ttaatgtaat agggttgatt gtatctaaag aacttgttgc ttcatccaaa
     3061 attagtattt tgggattat
//
LOCUS       DASCQP010000213         1520 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000811207, whole genome shotgun sequence.
ACCESSION   DASCQP010000213 DASCQP010000000
VERSION     DASCQP010000213.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1520)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1520)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1520
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000811207"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..726)
                     /locus_tag="QF480_03585"
     CDS             complement(<1..726)
                     /locus_tag="QF480_03585"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HJN05673.1"
                     /translation="MSRVVHWIQNQGLAHYPTSILRQLHQNPWAEIAILHFQILSNGD
                     RFANLIQWLSMIGASMGVSLIARQLGANLRGQIFSTVVSATIPMWILQASSTQNDYVV
                     SFWLICFVYFASLMLNDRIKWTHLVRVGASLGLAILTKATAYIYAFPFLLWFILTRIK
                     HLSWKSWKPIVIIAIVAVTINLGHYMRNFDLYGSPFGPGKEAAGFEYVNELFSIPALA
                     SNIIRNFALHIGTPIGLVNTIMER"
     gene            737..895
                     /locus_tag="QF480_03590"
     CDS             737..895
                     /locus_tag="QF480_03590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05674.1"
                     /translation="MESQVFAGLTMAIKPVRTKIKPIESNNARDIIDGLVILSRAIDS
                     GFLIEENK"
BASE COUNT          512 a          307 c          293 g          408 t
ORIGIN      
        1 cctttccatt atcgtgttga caagcccaat cggtgttcca atgtgcagag caaaatttct
       61 aatgatattc gatgctaatg ccggaatgct aaacaattca ttcacatatt caaaaccagc
      121 agcctctttg ccgggcccaa agggagaacc gtacaaatcg aaattacgca tataatggcc
      181 aaggttaatc gtaaccgcca caattgctat gataacaatg ggtttccatg atttccagct
      241 aaggtgcttg atgcgcgtga gaatgaacca aagtaaaaat ggaaacgcgt aaatataagc
      301 tgttgcctta gtcagaattg cgagtcccaa acttgcacca actcttacta aatgggtcca
      361 ttttattctg tcgtttaaca tcaatgacgc aaagtaaaca aaacatatta accagaatga
      421 aaccacgtaa tcattttgag tgctcgaggc ctggagtatc cacatgggaa tcgttgcgga
      481 tacaacagtg gaaaatattt gccctctcaa atttgcaccc agttgccttg cgataagtga
      541 cacacccata ctggccccga tcatactgag ccattgaata agattggcga agcgatcgcc
      601 attactcaaa atttgaaagt gaagaatagc aatttcggcc catggatttt gatgtagttg
      661 tcttaatatg gatgttgggt aatgggcgag accctgattt tgtatccaat gtaccacacg
      721 gctcatgtga taggtcatgg agtcccaagt gttcgccggg cttacaatgg caattaagcc
      781 tgtcagaacg aaaattaaac ctatcgaaag taacaatgcc agggatataa ttgatggtct
      841 cgtaatcctg tcgcgagcaa ttgattctgg ttttttaatt gaagaaaata aatagacaca
      901 acatagtccg ctaccgacaa gcccccaaat tcccaatacc caattaaaag taagagattt
      961 gaagaggctc agaatttcag taataataat taacaaggtg ccccatgcaa tagcagccga
     1021 taatgcagag cttcgccaac aattatccca cttatggaaa atcagaatta gaagaatgaa
     1081 tagaatgaat ggtatcaaag ccagcatttt tatcgctcgc agctacaaat tctctgatct
     1141 atagacaata atattttata tcttaattat tgatactaca aaatcttctg gaatttcaag
     1201 cttctaatct ccttgtgttt tcataataaa aagactgaac tatgaaatta tccataaatc
     1261 cagatatctg cctaatgtaa actcacgaaa agcgtcaact ttgttgaaaa tatagatgaa
     1321 atttatagga ttaagacacg aaaaacactt ttggctccga gatagaatta ttcaggatac
     1381 aataattgtt tttaattaaa cctcgggctc tgcccgagcg aacctcaaag gttctaccgt
     1441 tccggcgaga aaaagatgtg ataataggtt cttcctcagg gaaagtccca aaaggggcag
     1501 gaggaagaac ctatgcaaga
//
LOCUS       DASCQP010000214         3144 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000812576, whole genome shotgun sequence.
ACCESSION   DASCQP010000214 DASCQP010000000
VERSION     DASCQP010000214.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3144)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3144)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3144
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000812576"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..3110)
                     /locus_tag="QF480_03595"
     CDS             complement(<1..3110)
                     /locus_tag="QF480_03595"
                     /inference="COORDINATES: protein motif:HMM:NF016260.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translocation/assembly module TamB
                     domain-containing protein"
                     /protein_id="HJN05675.1"
                     /translation="MPNIIGITGKISGPVRNMKSENLKIKFGADTRISGDISFTGLPV
                     FSSTLMVGNELSITTNPQDINKFFLPIDEKHLDLSNVIPSNEQITFQGNFNGYFEDFS
                     SDIDILTSFGKIKSGVKFKHSPDNSVSFDVSLTGDTVNIGDFLNQTRALGDISFNIKV
                     TAVGKSPQKINYVSSGTLTNVDLLGYNYRRIDFDGNYSYDSATVDLQVGDKNLIMTAS
                     AKADLTEKNIFTVNSNIIRANLNKLNLWYDQNINLSSQLKAKVIGTDINKLNADISLN
                     DCRLVFDKKEYTIDTIVLTKTTDHLGNTNISLNSDIIDVGVTGNYNISTLTQSILRLP
                     DHYYNLFQTDTSKLIGNKYANISVNVTKPTIFSEQFLSGISFAPNTYVHSEINFENND
                     VKLNLFADKIQINDLIIDSSVLTVYSKNNHLFSDFTISKLILKDSTPEDTLAFGIDDF
                     SLSARIGNDSVTFGINWDNRNQVLKNSGILQGYVSKTLDSTKINIGQADVFVNNIPWS
                     IDTNNLVVIHKDQTYFHNFDIEAGRSEFKLIGTIPKNENENLEAQFTDWDLSYFDIIT
                     RPMNIDLDGRISGSLNLSLIKNNPTLVSNISIKELTLNHEYLGDANLFNTWDNTNNSI
                     YIKSQIIRQGNAGKGEVFLANGYYYPTKKDDNLNINVSFNRFKLRTLEPFLSTFVNQL
                     EGTTSGKLEIRGSALEPIITGTVEMQRTAMRVVYLNTKYSFSNSIEFVKNGIRFDKLV
                     IYDTLGNQASINGSLIHNNFSEPKFDVVITTSGLLFFNTTEHMNDLYYGTAFASGDLK
                     MSGDPNNVDLSIKIKTQKGTSVILPLNYSVEISDKDYIIFTKPAYDTISEKEILAYTN
                     EKKKNQLNYNIGVNMEVTPEAQVKISLPADMGTIEARGSSNLALGVNSFGKFNLVGDY
                     VVNDGMFHFKIGNLVSKRFSLVKGGRISWTGNPYSANVSIKGMYKVKTNLSSLGIVVD
                     STASYRNKVTVECFVVLTGELLNPNIKFEIKLPDIDPDLQRAVYSELDTTNTAMMNQQ
                     MISLLVL"
BASE COUNT          992 a          518 c          495 g         1139 t
ORIGIN      
        1 agtactaata gtgatatcat ttgctggttc atcattgctg tgtttgtagt gtcaagttct
       61 gaatatacag ccctttgcaa atctggatca atatctggga gctttatctc aaacttgatg
      121 ttgggattaa gtaattctcc ggttaaaaca acaaaacatt caactgttac tttatttcta
      181 tatgatgcgg ttgagtcgac cacaatgcct aaacttgaga gattggtttt aactttatac
      241 atacccttta tgcttacatt ggcagaataa gggtttccag tccatgatat tcgcccccct
      301 tttaccaatg aaaaacgctt gcttacgagg tttccaattt taaaatgaaa catgccgtca
      361 ttcacaacat aatcccccac taagttaaat ttaccaaacg agttaacacc cagtgcaaga
      421 tttgaacttc cacgtgcttc aatagttccc atatcagcgg gtaatgagat ttttacttga
      481 gcctcaggag taacctccat gttaacacct atgttataat taagttgatt ttttttcttt
      541 tcatttgtat acgccaaaat ttccttttcc gatatggtgt cataagctgg tttagtaaat
      601 ataatataat ccttatcaga tatttctact gaataattaa gtggcaatat taccgaagtt
      661 cctttttgag tttttatttt aatactaagg tcaacattat taggatctcc gctcattttt
      721 aaatctcccg aagcaaaggc agtaccataa tacaagtcgt tcatgtgctc ggttgtatta
      781 aaaaaaagca atccagatgt agtaataaca acatcaaact ttggttcact aaagttgttg
      841 tggattaaac ttccgtttat agatgcctga ttgccaagtg tgtcgtatat tacaagctta
      901 tcgaaccgga taccgttctt aacaaattct attgagtttg agaaggaata tttggtgttc
      961 aagtatacaa ctctcattgc ggttcgttgc atttcaacag ttcccgttat aataggttct
     1021 aatgcacttc ctcttatttc aagtttccca gatgttgttc cttcaagctg gtttacaaaa
     1081 gtgctcaaaa aaggctcgag ggttcttaac ttgaatctgt taaaagaaac attaatattt
     1141 agattatcat cttttttagt cggataataa taaccatttg ccaaaaaaac ttcgcctttt
     1201 ccagcatttc cttgtcttat tatttgtgat ttaatataaa ttgaattgtt ggtattatcc
     1261 catgtgttaa ataaattagc atcgcctaaa tactcatgat ttagagttaa ttctttgatg
     1321 ctaatgttgg aaactagagt tggattattt tttatcagac taaggttaag agatccgctt
     1381 attcgaccat ccaagtcaat attcataggt ctggtaataa tgtcaaaata ggataagtcc
     1441 caatcagtaa attgagcttc aagattttca ttctcatttt ttggaatagt tccaataagt
     1501 ttaaattctg atcttcctgc ttctatatca aagttatgaa agtatgtctg atccttatgt
     1561 attacaacta aattatttgt gtcaatgctc catggaatat tgttaacaaa tacatcagct
     1621 tgtccaatat taatttttgt tgaatcaagt gttttcgaaa cataaccttg cagaattcct
     1681 gaatttttca atacctgatt tcgattatcc cagtttatac caaaggttac agagtcgttg
     1741 ccaattcttg cagataaact aaaatcatct atgccaaatg caagagtatc ttcaggagta
     1801 ctgtctttga gtattaattt cgatattgta aaatcactaa atagatgatt gtttttgcta
     1861 tatacagtca gcacactgct atctattatt aaatcattaa tttggatttt atctgcaaag
     1921 agattgagtt tgacgtcatt attttcaaaa ttaatttcag aatgtacata agtatttggg
     1981 gcgaatgaaa ttcctgaaag aaactgttca ctgaaaattg ttggtttagt tacattaaca
     2041 gatatattgg catatttatt accaattaac ttggatgtat ctgtctgaaa taaattataa
     2101 taatgatcag gcaatctcaa aatactttgt gtaagcgttg agatattgta attaccagta
     2161 acaccgacat caataatgtc tgagttcaga gagatattag tatttccaag atggtcagta
     2221 gtttttgtta atactatggt atcaattgtg tactcttttt tatcgaatac tagtctgcaa
     2281 tcatttaatg agatatctgc atttaattta ttaatatcgg taccaattac ttttgcttta
     2341 agttgggatg ataaatttat attctgatca taccatagat taagtttgtt tagattagcc
     2401 cgaattatat ttgaattaac agtgaatata tttttttcag tcaaatctgc tttggcagaa
     2461 gcggtcatta ttaaattttt gtcaccaact tgtaggtcaa cagttgctga gtcatatgaa
     2521 tagttaccat caaaatcaat tctccgataa ttgtaaccaa gtaaatccac attagttagg
     2581 gttcctgaag aaacgtaatt gattttttgt ggagatttac ctactgctgt aactttaata
     2641 ttaaaactaa tatcccctag tgccctggtt tggttcaaaa aatctccgat gttaacagtg
     2701 tcaccagtta aagaaacatc aaatgaaact gagttatctg gtgaatgttt aaattttaca
     2761 cctgatttta tttttccgaa gctcgttaat atgtctatat cgcttgaaaa atcctcaaaa
     2821 taaccgttaa aatttccttg aaaggtaatt tgttcgttag aaggtatgac attggaaaga
     2881 tcaagatgtt tttcatcaat tggtaaaaaa aacttattaa tatcttgtgg attagtagta
     2941 atagataact cattgcctac cataagggta gatgaaaaga ctggtagtcc agtaaaacta
     3001 atatcacctg aaattcttgt atctgctcca aatttaattt taaggttttc tgacttcata
     3061 tttcttaccg gcccacttat ttttcctgtg atcccgataa tattcggcat ctcaaaaaga
     3121 atattggcaa aatagcccag atct
//
LOCUS       DASCQP010000215         3983 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000813837, whole genome shotgun sequence.
ACCESSION   DASCQP010000215 DASCQP010000000
VERSION     DASCQP010000215.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3983)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3983)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3983
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000813837"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..2630
                     /locus_tag="QF480_03600"
     CDS             <1..2630
                     /locus_tag="QF480_03600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05676.1"
                     /translation="LIFFTITKLDRLPQSKKFTSFPIYISLFFLLAGAYTTYSYIDNK
                     KSIIRFKKQLIDLNNQYFNYAKVNVDSCNINLSHVGTQIEAKAKLTVTNNHKQTIDTL
                     IFSLNPSLKVNNVKVDSLNVPVIRELQLLKIVVPGGITPNEKQQITLNYAGTINENTC
                     FLDQNLEDFKDNFSFEIFRIKKRYAYLDNDFVLLTREALWYPIAGVGYASESPSSYTP
                     GFTNYSLTVTTDSNLYAISQGTSTQPEPGVFQFYTDVPLPQISLLIGDYINYSVNVDS
                     IDYNLFTIAGNDYYKEYFNDINDSLPGIIRDLKNEYETQIGFEYPFKRFSLAEVPVQF
                     ALDKHIWSLTSDAVQPEITFYIEKGVVLEETDFKKRLRRTERNMNRNNEEVGPLELQS
                     RIFKRFTRGNFMAPHSEWYMFRGMDRNTLSLFPNYLTFVTSLDSEKWPALSLSLQTYL
                     KDRYSNPISSYRWYFTDLSKSERINLELKRNSLAEHSKLHKTSDNDNESISNYELIIA
                     KGNYLFSVLRARYGDEEFNSLLDELVISNKQKSISLSSFDSAMISNFNETIIDKVNNW
                     YYEPSLPGFLVKDVETYKVMVGEHTKYQIKFKISNPEETDGIITINIDLYDPNDRGSN
                     RDSPPDFSKKVYIPAESAKEVGFVFSTEPVRMNIFTHISLNLPNNIIYDFGAFNETKK
                     VTVIDSLANGEPFDNMLVEGEIIVDNDDSTFNYFHEIKKSYLKTLIDDKKDPGYGFSR
                     IRWWRPPSEWQRVLRSGFYGKYVRSAMYTRSGQDDRTATWTAPIKNNGYYDVYCHVEK
                     INVNFSNMGRRSKKSDYNFKVYHEGGVEKIHLTDSDLEDGWNYLGTFFITPSTAKVEL
                     SNSSVGPMIFADAIKWIEN"
     gene            2642..>3983
                     /locus_tag="QF480_03605"
     CDS             2642..>3983
                     /locus_tag="QF480_03605"
                     /inference="COORDINATES: protein motif:HMM:NF014385.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HJN05677.1"
                     /translation="MQIVKPIILTCLLISQGYLFSQPLPTSEERLLTLDQSMEIAGQN
                     SPAIQKSRYNMEKNKEYLNAQLASLKSNFFLNITPASYSKGDVYDEITSKWYTTERKE
                     AEASLSISQPVKFTDGLITIQNVFGYKDNYSESSSTNVTKSFNNSLFVNYDQPIFTYN
                     RLKLNLDRIRLNLETATMAYAIEMLNMEYRVNQAFYSVYQKETAVQIAKEEFENQKVS
                     LEIIQSKVEAGLSAKEELLQGELNYATSQSSLDNSKVDLENSQDQFKLLIGMSLFDKV
                     SVKSDIDFKLIYVNLEKAIENGLSQRLELTQRNIDLKMAEFSLTETSSQNEFRGDIRL
                     SVGIDGYNESFTSIYDKTTPSPAFGITFKIPLYDWGERKANIKAAEIEIQSKQIDLED
                     QKNNIIINIRQTYRNLQNLVNQIEIARQNEKNAQLTYEINLERYQNGDLTSIDLQ"
BASE COUNT         1439 a          679 c          684 g         1181 t
ORIGIN      
        1 ctttaatttt tttcactata acaaaactcg acaggcttcc ccaatcaaaa aaattcacat
       61 catttccaat ttatatatca cttttctttc tattagcagg tgcatatact acttatagct
      121 atattgacaa taagaaaagt ataataagat tcaaaaagca gctcatagat ttaaacaacc
      181 aatattttaa ctatgcaaaa gttaacgttg attcttgcaa tatcaactta tcacacgttg
      241 gtacccaaat cgaagcaaaa gcgaaactta ctgtcacaaa taatcacaag caaacaatag
      301 atactctcat ctttagcctt aacccatctt taaaagttaa taatgtgaaa gttgacagcc
      361 taaatgtgcc agtaatcaga gaattacaac tactaaaaat agttgtccca ggaggaataa
      421 cacctaatga gaagcaacag attactttaa attacgcagg tacaattaat gaaaatacat
      481 gctttctgga tcaaaacctg gaggatttca aggacaactt ttcatttgag attttcagga
      541 ttaaaaagcg atatgcttat cttgataatg attttgtttt gttaacacgt gaagcacttt
      601 ggtatccaat tgcaggagtg ggatatgcat cagaaagtcc ttcaagttat acaccaggat
      661 ttaccaatta ttcattaacc gttactaccg attcaaattt atatgctatt tcacagggta
      721 ctagcacaca acctgaacca ggcgtttttc agttctacac tgatgttcca ttaccccaaa
      781 ttagcttact tattggcgat tatattaact attcagttaa tgttgactca attgattata
      841 acttatttac aattgctggt aacgattact acaaagagta tttcaacgat ataaacgata
      901 gccttcccgg aattattagg gacctgaaaa atgagtatga aacacaaata ggatttgaat
      961 atccgtttaa acgtttttcg cttgccgaag taccggttca atttgccctc gataaacata
     1021 tttggtcact aacaagcgat gcagttcaac ctgaaataac tttctacatt gaaaaaggtg
     1081 tcgtattgga agaaactgat ttcaaaaaac gattgagaag aacagaaagg aatatgaaca
     1141 gaaacaatga agaagtagga ccacttgagt tgcaatcaag aatatttaaa cgatttacaa
     1201 gaggtaattt catggctcct catagcgaat ggtatatgtt ccgtggcatg gacagaaata
     1261 ctctgtcgct gtttccaaac taccttactt ttgttacatc cttagactca gaaaaatggc
     1321 ctgccctaag cttgtcatta caaacttatt tgaaagatag atattcaaat cctatttcct
     1381 cctaccgttg gtattttacc gatctaagta aaagtgaacg aataaatctt gaattaaaac
     1441 gaaactctct tgctgaacat tccaaattgc ataaaacgtc tgacaatgac aatgagagta
     1501 tttctaatta tgaactaata attgcaaaag gcaattactt attttcagtt ttacgagctc
     1561 gctatggtga tgaagaattt aattcgcttc tcgacgaact tgttatttcc aataaacaaa
     1621 aatctattag cctttcctct ttcgattctg ccatgataag caactttaac gagactatta
     1681 ttgataaagt taacaactgg tattatgaac ctagtttacc cggttttctt gtaaaagatg
     1741 tagaaaccta taaggttatg gtaggagagc atactaaata tcaaattaag tttaaaatat
     1801 caaatcctga agaaactgac ggcattatta ccataaacat cgatctttat gatccgaacg
     1861 atcgtggcag taatagagat agcccacccg atttctcgaa aaaagtctat attccggcag
     1921 agtcagcaaa agaggttggt tttgtatttt ctacagagcc tgttagaatg aatattttta
     1981 cacatatttc actaaacctt cccaataaca tcatttatga ttttggcgca tttaatgaaa
     2041 ccaaaaaagt tacggttatt gatagtttgg ctaatggcga accttttgat aacatgttag
     2101 ttgaaggtga aatcattgtt gataatgatg acagtacatt caattatttt catgaaatca
     2161 aaaagagcta tttaaagact cttatagatg ataaaaagga tcctggatac ggattctcaa
     2221 gaataaggtg gtggagaccg ccatcagaat ggcagagggt actaaggtct ggtttttatg
     2281 gcaaatatgt acgttctgca atgtatactc gtagtggtca agacgaccgg accgctacct
     2341 ggacagcacc aataaaaaat aatggatatt atgatgttta ttgtcatgtt gagaaaataa
     2401 atgtaaattt ttcaaacatg ggaagacgtt caaaaaaatc tgactacaat tttaaggtgt
     2461 atcatgaagg aggtgttgaa aaaatacatt tgaccgacag cgatcttgag gacggttgga
     2521 attatcttgg aacattcttt attacaccat caacagcaaa ggttgaatta agcaatagtt
     2581 cagttggccc aatgattttt gccgatgcaa ttaaatggat agaaaattaa aaataatgat
     2641 tatgcaaatt gttaaaccaa taatattaac atgtttgtta attagccagg gatatttgtt
     2701 ttcacaaccc ctgcctacca gcgaagagag acttttaact cttgatcaat cgatggaaat
     2761 agccgggcag aatagtcctg ctattcaaaa atcgaggtac aatatggaaa aaaacaagga
     2821 gtatctgaat gcacagcttg cttctctgaa atctaatttc tttctcaaca ttacaccggc
     2881 aagctactct aaaggagatg tttatgatga aataacatca aaatggtata ctactgaaag
     2941 gaaagaggca gaggccagcc ttagcatttc gcaaccagtt aaatttactg atgggctgat
     3001 tacaattcaa aatgtttttg gatataagga caactattca gaatcatctt caacaaatgt
     3061 tactaagtcc tttaataact ctctctttgt taactatgac cagcccattt tcacatataa
     3121 ccgattaaaa cttaacttgg atagaataag gctaaacttg gaaacagcaa ctatggctta
     3181 tgcaattgaa atgctaaata tggagtatag agtaaatcag gcattttact cagtttatca
     3241 aaaagaaact gccgttcaga tcgcaaaaga agaatttgaa aaccagaagg ttagtttaga
     3301 aataattcaa agtaaggttg aggccggatt atctgcaaaa gaagagctgt tacaaggaga
     3361 gttaaattac gcaacaagtc aatccagcct tgataacagt aaagtagatc tagagaattc
     3421 acaggatcag tttaagctac taataggaat gtctctcttt gataaggtta gtgttaaatc
     3481 ggatatagat tttaaactaa tttatgtaaa tcttgaaaaa gccatagaaa acggactaag
     3541 ccaacgactt gagctaacgc aaagaaatat tgatcttaaa atggcagagt ttagtctaac
     3601 cgaaacgtca tctcaaaatg agtttcgtgg cgacataaga ctttcggttg gtatagatgg
     3661 ttataatgag tcttttacaa gtatttatga taaaacaaca ccaagtcctg cgtttggtat
     3721 tacatttaaa attcctcttt acgactgggg cgaaagaaaa gcaaatatta aagctgcgga
     3781 aattgaaata caatcgaagc aaattgacct tgaagatcag aaaaataata ttatcattaa
     3841 tatccgacaa acgtatcgca acctacaaaa ccttgtcaat caaattgaaa tcgcaaggca
     3901 aaacgaaaaa aacgcacagc tcacatacga aattaacctg gagagatatc agaatggtga
     3961 tctaacgagc attgatcttc agc
//
LOCUS       DASCQP010000216         2695 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000817858, whole genome shotgun sequence.
ACCESSION   DASCQP010000216 DASCQP010000000
VERSION     DASCQP010000216.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2695)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2695)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2695
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000817858"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..357)
                     /locus_tag="QF480_03610"
     CDS             complement(<1..357)
                     /locus_tag="QF480_03610"
                     /inference="COORDINATES: protein motif:HMM:NF019284.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05678.1"
                     /translation="MINSIKIFLLLLFLSILYIGCKDNREKYWENGNLQSELQYKDNK
                     LNGLATWYYENGNKEQEVYYTNNVIVGSLLRWYQNGNYESKSFYKNGRLEGQALMFDE
                     NGHLLSEENYVNDTLDG"
     gene            complement(350..>2695)
                     /locus_tag="QF480_03615"
     CDS             complement(350..>2695)
                     /locus_tag="QF480_03615"
                     /inference="COORDINATES: protein motif:HMM:NF013275.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HJN05679.1"
                     /translation="SKNETFARLSSIYLIPERYIFKANPNLSSPLREGEYVKIPVEDS
                     FDILDGKAKKRSSTRSVKASNTGSAYSKRVNNPASNNSSASKLNTSDNRSKSNSANNR
                     IPADISETVSFNPDIAVIPDYRHVVILGETTKTIANKYDIPVDILKAANPGLGNNVTK
                     GDRLRVPDKTKLQKTIKEQPLNNNEPKIIEPTTDTNISIPAATSPQYETIKHKVKKKE
                     TLYSIGREYGVTVSELMQANNGLTTTISIGQIILVPKKKISTPYIIHRVENKTKVSKI
                     AKLYRIPVYQIKEYNPEVGKRVYSGQDIKIPVGNHAIIMTLPLVNDKVSRSHEQSDRY
                     KHITENRSSHCNFTPDGNRIFKIALMIPMFLEEADSLNKEEFLLSHQPFFSPFRFIQF
                     YEGALLALDSLTKQGMKVEMYVYDVGRNLTKTTEVLRQRELRNMDLIIGPFYSNSFNQ
                     VALFAGNFNIPIVNPLSYREAVINDYKTVIKVKPEILSQVVMIKTYVNIFANYSKVFL
                     ISQTSYKDADKVIEINNGIISELEPQIKFSNEELLDLAFAVAQRDTLYEDVNTPPPFI
                     IENTEIYPSILESIPSDSTVINNYLIRINYATDSLHPFLENASPLRNNLVLLYGTKKS
                     FILDVINRLNECRDTFDIQLLGVPTWERINNLSNVEMNNLNLSYFASNYINYQSESTQ
                     DFIDTFRNNFSSEPDYYAFSGFDVTYYFLSSLFYLGDDFSDCLDQFPMKLLQSTYSFK
                     RVANTDNFENKYWNLLQLKHMTKIKIPDNIILPEKEVLTYD"
BASE COUNT          809 a          453 c          455 g          978 t
ORIGIN      
        1 accatctaat gtgtcattaa cataattttc ttccgatagc aaatgtccat tttcatcaaa
       61 cataagtgcc tgaccttcaa gcctgccatt tttgtaaaat gatttagatt catagtttcc
      121 gttttggtac caccgtaaaa gagaaccaac tattacattg ttggtgtaat atacctcttg
      181 ctctttatta ccattctcat aataccaggt tgctaggccg tttagtttgt tatccttgta
      241 ttgcagctcc gactgaagat tcccattctc ccaatatttt tcacggttgt ccttacatcc
      301 aatatataat attgataaaa aaagtagtag taaaaatatt ttgattgaat taatcatatg
      361 tcaaaacttc tttctcagga agtatgatgt tatcaggtat ttttattttg gtcatatgct
      421 tgagttgtaa tagattccag tacttgtttt caaaattatc cgtgttagca actcttttaa
      481 acgaatacgt cgactgcaat agtttcattg gaaactgatc gaggcaatca ctaaaatcat
      541 cacctaagta aaaaagtgag cttaagaagt agtaagtgac atcaaaacca gaaaatgcat
      601 aatagtcggg ttcactacta aaattatttc taaaagtgtc gatgaagtcc tgtgtgcttt
      661 cagattgata gttaatgtaa ttagatgcga aatacgataa attgagatta ttcatttcga
      721 cattgctaag attgtttatt ctttcccatg ttggaactcc aagtagttga atatcaaaag
      781 tatctctgca ttcgtttagt ctattaatta catccagaat aaatgacttt ttagtaccat
      841 ataataatac aagattgttg cgtaggggtg aagcattttc aaggaatggg tgcagactgt
      901 cagtagcata attaattcta atcaggtagt tattgataac agtgctatcc gatggtatgc
      961 tttcaagaat tgaaggataa atctctgtat tctctataat gaaggggggt ggggtattta
     1021 catcctcata aagtgtatcg cgctgtgcaa cagcaaaagc taagtcaagt agttcttcgt
     1081 tactaaattt aatctgaggt tcaagttccg atattattcc attgtttatt tcaataacct
     1141 tatcagcgtc tttataggat gtttgagaaa tcaggaaaac cttactataa tttgcaaaaa
     1201 tattgacata tgtttttatc atcactactt gagacagaat ttctggttta actttaatta
     1261 ctgttttata atcgtttatt acagcttcac gatatgaaag aggattaact ataggtatgt
     1321 tgaaattacc agcaaacaaa gcaacctgat taaagctatt gctataaaac ggtccaatta
     1381 tgagatccat attacgtaat tcacgttgcc gtaaaacttc tgtcgtttta gttagatttc
     1441 tgccaacatc ataaacatac atttcaactt tcatcccttg ttttgtcaat gaatccagag
     1501 ccagtagagc cccttcgtaa aattgaataa atctgaaagg agaaaaaaaa ggttgatgtg
     1561 acaacaggaa ttcttcttta ttcagactgt cagcctcttc taaaaacata ggtatcatta
     1621 aagctatttt aaaaatcctg ttgccatcag gtgtgaagtt acaatggctg cttctatttt
     1681 cagtaatatg cttgtatctg tcagactgct catgcgaacg tgaaacttta tcatttacaa
     1741 gtggtaaggt cataattatt gcatgatttc ccacaggaat tttaatatcc tggccactat
     1801 aaacacgctt tccaacttca gggttatact cttttatttg gtaaaccgga attcgataga
     1861 gctttgcaat tttacttact ttggttttgt tttccactct gtggattata tacggagtgc
     1921 ttattttttt tttgggaaca agaattattt gtccgatact tattgtagtt gtaagcccat
     1981 tattagcctg catcagctca gaaactgtaa ctccatattc ccttccaata ctataaagag
     2041 tttctttttt cttcacctta tgttttattg tttcatattg aggacttgta gctgctggaa
     2101 tagaaatgtt tgtatcagta gttggttcaa ttattttggg ttcgttgttg ttgagaggtt
     2161 gttctttgat tgtcttttgt aattttgttt tatcaggaac acgtaaacga tctccctttg
     2221 taacattgtt ccctaacccc ggatttgcag ctttaagaat atctaccgga atatcatatt
     2281 tgtttgcaat agtttttgtc gtttctccaa gaattacaac atgccgataa tccggaatca
     2341 cagctatatc aggattgaaa ctaactgttt ctgatatatc tgccgggata cgattattcg
     2401 cagaatttga ctttgatcta ttatcactag tattaagctt acttgcagat gaattatttg
     2461 atgcgggatt attgactcgt ttggaatagg cagaacctgt atttgaagct ttaaccgatc
     2521 ttgttgagct cctttttttt gcctttccat ctaatatatc aaacgagtct tcaacaggta
     2581 ttttaacata ttctccttcc cgtaaaggtg atgataaatt aggatttgct ttgaaaatat
     2641 atctttcagg aattaaataa attgagctta agcgtgcaaa cgtttcattc ttgga
//
LOCUS       DASCQP010000217         2082 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000822505, whole genome shotgun sequence.
ACCESSION   DASCQP010000217 DASCQP010000000
VERSION     DASCQP010000217.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2082)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2082)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2082
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000822505"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(172..1530)
                     /locus_tag="QF480_03620"
     CDS             complement(172..1530)
                     /locus_tag="QF480_03620"
                     /inference="COORDINATES: protein motif:HMM:NF016289.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HJN05680.1"
                     /translation="MIRISLFILLISTINLSISQNQDEKVIKDIFDNVLLSDEAYNNL
                     EYLCEKAPGRLLGYDESLIAINYMKDYFESLGADTVFLQEFKTPAWKCYNTAVSILTG
                     ENEIKLRADALGPSPSTQPEGLLAKVIEVQGLEELKALKQENIEGNIVFFNRPVDLRK
                     VNTFRVYGGGVDQRYRGPAVAAELGAAGVLVRSVGTAIDTFPHTGSTGFKDKKIPCAA
                     ISTIDADILSESLSGEKDLKVKLVIDAEDFEEITTYNLIADLRGSEFPDEFIVVGGHI
                     DSWFNSPGAHDDGIGCVQSADVMRIFKELGLKNKRTLRVIMFMDEELYQSGAKAYVKY
                     TETNGIKNYLALEADAGGFTPEGFMVDASDSIVANISGYKPLLEPYGIHYIKKGGSGV
                     DIGPLKKFGVPLMGYRTDSQRYMDLHHSANDSFDKVHIRELQLGSGNMAAIIYLIDKH
                     GL"
     gene            1811..>2082
                     /locus_tag="QF480_03625"
     CDS             1811..>2082
                     /locus_tag="QF480_03625"
                     /EC_number="3.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004347353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase domain-containing protein"
                     /protein_id="HJN05681.1"
                     /translation="MKTFRQILFVISFMLFSTLITGQNNIYVLATGGTIAGAQGDADK
                     PGYKAGSFSVDDLISAVPKLKDIANLKGEQVANIGSQDMNDQVWLKL"
BASE COUNT          639 a          414 c          342 g          687 t
ORIGIN      
        1 agaataggta atgaaacagc aagcgaaaac aatattaaaa gagatgttgg tcgtcttttt
       61 caaactcttc ctgttaaaaa attgaaaaag aaataagact ttataagtac gttaacttct
      121 ccttaacttg attcattcct gcctaattca tccttaggat tctgatttag gttacaaccc
      181 atgcttatcg atcagataaa taatagctgc catatttcct gatcctagct gtagctccct
      241 gatgtgaact ttatcaaaac tatcatttgc gctgtgatga aggtccatat atctttgcga
      301 atctgtccta tagcccatta aaggtacacc aaactttttt aaaggaccaa tgtctactcc
      361 actcccgccc ttttttatgt agtgaatacc atagggctcg agaagaggtt tgtatcccga
      421 aatattggca actatactat cggatgcatc aaccataaat ccttcgggtg taaatcctcc
      481 ggcatcagct tcaagggcga gatagttctt tattccgttt gtttcagtgt actttacata
      541 tgcttttgcg cctgattgat agagctcttc atccataaac ataataactc gaagtgtcct
      601 cttgttcttt aaacccagtt ctttaaaaat tctcataaca tcagctgatt gtacacatcc
      661 tatcccatca tcatgtgccc ctggactatt gaaccaggaa tcaatatgtc ctccaaccac
      721 aataaattca tcaggaaatt cactccccct tagatctgca ataaggttat aagttgttat
      781 ttcttcaaaa tcttctgcat cgattaccaa tttcaccttg agatcttttt cgccacttag
      841 tgattcgctt agaatatcag catcgatagt gctgatcgca gcgcaaggaa tttttttgtc
      901 tttaaatcct gttgacccgg tatgtggaaa agtgtcaatg gctgttccaa ctgatcttac
      961 taacactccc gccgcaccaa gttcagcagc aactgcggga ccacgatacc tttgatctac
     1021 tccaccaccg taaacccgga aagtattgac ttttcttaaa tctacgggtc tgttaaaaaa
     1081 cacaatattt ccttctatat tttcctgttt aagagcctta agttcttcta aaccctgtac
     1141 ttcaattacc tttgccaaca atccttcggg ttgtgtagag ggagaaggcc ctaaagcatc
     1201 agcccgtagt ttaatttcat tttcgccagt taatatacta acagctgtgt tataacattt
     1261 ccaggcgggt gtcttaaact cttgtaggaa aactgtatca gctcccaaac tttcaaaata
     1321 gtccttcatg taattgattg cgattaatga ctcatcataa cctaatagtc ttcctggagc
     1381 tttttcacat aaatactcaa gattattata agcctcatca cttaagagca cattatcaaa
     1441 aatatccttg attactttct catcttgatt ttgagaaatt gaaagattga tcgtcgatat
     1501 taacaggata aagagagaga ttcgtatcat attttttggt tataaaagta gagaaaatgt
     1561 cattactttc taactctaca atgtctgagt ggattaatcc aacttttccg aatttttaga
     1621 atactaataa acagatagtt acagattaat ctaaatgttt tgcgctcata actaaattta
     1681 tagttatatt tacactagtg ttgcgttaag attggctaat atctttttaa ccttatgggg
     1741 gcctataatt attgcgcttg taagctaatg tttaatgcaa aaatattttt tgtaaataaa
     1801 attatatgaa atgaaaacct tcagacaaat actctttgta attagtttta tgttattctc
     1861 taccctaatt actgggcaaa acaatattta tgtgttggca actggcggaa ccatagctgg
     1921 agcacaaggg gatgccgaca aacctggtta taaagcagga tcatttagtg tggatgattt
     1981 gatttcggct gtccccaaat taaaagatat agccaatctt aaaggagagc aggtggctaa
     2041 tataggaagc caggatatga atgatcaagt ttggttaaaa ct
//
LOCUS       DASCQP010000218         1703 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000823494, whole genome shotgun sequence.
ACCESSION   DASCQP010000218 DASCQP010000000
VERSION     DASCQP010000218.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1703)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1703)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1703
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000823494"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(209..1486)
                     /locus_tag="QF480_03630"
     CDS             complement(209..1486)
                     /locus_tag="QF480_03630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05682.1"
                     /translation="MTTHPVLREVQISDYEKVKSLFRKIRMPSESIEAWKSYRKSPAL
                     KKAGKDFPFGWVLESGNNIVGYLANIPMMYSYQGSEVFVAVARAYAVAPEYKGHGLKL
                     ALKFFKQQEVSALLNTTANEYSAAVFKYFNAKPVPQAHYNEALFLVFNSWQFLRAVFL
                     KCKFPGAIASGAALLNTTANEHSAAVFKYLKAKPVPQAHYNEVLFLVYNSWQFLRAVF
                     IKCKFPGSIASGTALFLAPLFKIITILKQKNTPSYLQDLFLKRVCIDNLVEELDKLWV
                     TKREQRVFYTDRSVAMLQWRINIAPSLYHMYGAYLKGQFLGYILLKIEHVEHLKLKRC
                     LIIDIFGDFKNDENLEVLISKLVREVQNLSVDTLEIIGFPQAIREVVKRLLPFKRIIP
                     TWPYFKFMTQDLRTVCQNSDFWYVSLIDGDSSL"
     gene            complement(1483..>1703)
                     /locus_tag="QF480_03635"
     CDS             complement(1483..>1703)
                     /locus_tag="QF480_03635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0000036 - acyl carrier activity [Evidence
                     IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HJN05683.1"
                     /translation="IQVLINIFQVSPDKISAETTSDNVENWDSMNHINMILALEQEFG
                     ISYDEEQAVSMLSVGEIIEVTKGKLGLQ"
BASE COUNT          571 a          349 c          289 g          494 t
ORIGIN      
        1 acctgtttgc caaaggtaag ccgccgagca gtaacaggat ccatgtggag tggattgtag
       61 tcaccagaaa ggcgagcaaa catatcttga tctgacttag taaaaactcg acttttcata
      121 aataagtatt ttcgtcaaga tacaacagta tagtatctat aacgttattc ttaaaacttc
      181 aattaaagat catccattat cgattaagtt acaaagaaga gtcaccatca atcaatgaca
      241 cataccaaaa atcactgttt tgacatactg ttctcaagtc ctgagtcata aatttgaagt
      301 atggccaagt tggaataata cgcttaaaag gtagaagccg tttgacgact tcacggatag
      361 cttgagggaa tcctataatt tctaaggtat caactgacaa attctgaact tctctgacaa
      421 gtttagaaat cagtacctca agattctcgt catttttaaa atcaccaaaa atatcaatta
      481 ttaagcatcg tttgagcttg agatgctcaa catgctcaat tttcaataag atatatccaa
      541 gaaactgacc ttttaaatag gcaccataca tatgataaag agatggagca atattaatac
      601 gccattgcaa cattgcgaca ctacgatcag tgtaaaacac cctttgctct ctttttgtaa
      661 cccaaagctt atcaagttct tccaccaaat tatctataca gaccctctta agaaacaaat
      721 cctggaggta agaaggtgta ttcttttgct tcagaatggt aataatttta aacaatggcg
      781 ctaaaaaaag agcagtgcct gatgcaatac taccagggaa cttacattta ataaaaacag
      841 cacgcaagaa ctgccatgaa ttataaacca gaaacagtac ctcattatag tgagcctggg
      901 gcactggttt ggcttttaaa tacttaaaaa cagccgctga atgctcattt gctgtcgtat
      961 taagaagagc agcacctgat gcaatagcac cagggaactt acatttaaga aaaacagcac
     1021 gcaagaactg ccatgaatta aaaaccagaa ataatgcctc attatagtga gcctggggta
     1081 ccggtttggc attaaaatat ttaaaaacag ccgctgaata ctcatttgcc gtcgtattaa
     1141 gcagagcgga cacttcttgt tgcttaaaaa attttaatgc aagtttaagc ccatggccct
     1201 tatattccgg agcaaccgca taggcccggg caacagccac gaaaacttca gagccttgat
     1261 aactatacat cattgggata ttagccaaat aaccaacgat attatttcca gattcaagca
     1321 cccatccaaa agggaaatct ttaccagctt ttttaagagc ggggcttttg cggtaagact
     1381 tccatgcttc aatagactct gaaggcattc ttattttacg aaatagtgac tttacttttt
     1441 cataatcact tatctgaact tctctcaata ctggatgagt ggtcattgta aacctaactt
     1501 ccctttggtc acttctatta tttctcccac actaagcatg ctcaccgctt gttcttcgtc
     1561 gtaactaata ccaaattcct gctctagggc taaaatcata ttaatatgat tcatcgagtc
     1621 ccaattttcg acattgtcag acgtagtttc ggcggatatt ttatcaggag aaacctggaa
     1681 aatatttatt agtacttgta tca
//
LOCUS       DASCQP010000219         2621 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000830055, whole genome shotgun sequence.
ACCESSION   DASCQP010000219 DASCQP010000000
VERSION     DASCQP010000219.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2621)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2621)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2621
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000830055"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..679)
                     /locus_tag="QF480_03640"
     CDS             complement(<1..679)
                     /locus_tag="QF480_03640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013444383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1015 domain-containing protein"
                     /protein_id="HJN05684.1"
                     /translation="MAILKAFKGYRPPKNIVKELASRPYDVLNSSEARDEASGNIYSL
                     LHIIKPEIDLDDNINLYNQEVYNKAKDNFEEFKAAGWLKQDEKDYLYIYAQTMFGKTQ
                     YGIVGCASVDDYMNNVIKKHELTRPDKEEDRMKHVRITNANMEPVFFSYPAVAEIDNI
                     IEDYVDANNADFDFTADDGIGHHFWVIRDSSIINRIIELFSKLPSTYVADGHHRTAAA
                     TLVGNEKK"
     gene            complement(731..1249)
                     /locus_tag="QF480_03645"
     CDS             complement(731..1249)
                     /locus_tag="QF480_03645"
                     /inference="COORDINATES: protein motif:HMM:TIGR02436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four helix bundle protein"
                     /protein_id="HJN05685.1"
                     /translation="MSDQIEKIEKAGTFFRFEDLRIYHKSLEYINWLQDVTMLFPDNN
                     LQFVHRFNDSARNIAFFIAEGSARNKNQFIYYLKMAKSSIRECLIFTTLSYKQNNISE
                     THENDSRNELMEMTKMIGALISSLQRSIGASNNGNHNNNYRYNGKGNEANERRTKYEN
                     VDDPNYNKETDN"
     gene            complement(1354..2289)
                     /locus_tag="QF480_03650"
     CDS             complement(1354..2289)
                     /locus_tag="QF480_03650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018339687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoglycerate dehydrogenase"
                     /protein_id="HJN05686.1"
                     /translation="MTKVLVATEKPFATAAVEEIGGIFKDAGYNCTFFEKYNGQDELI
                     DAVKDAEAMIVRSDKVTPEVIDAATKLKIVVRAGAGFDNVNLEAATKNDVVVMNTPGQ
                     NSNAVAELAMGMMVYQARNHFNGTSGTELCCKKLGIHAYGNVGKLVAKIAKGFGMEVY
                     AFDPFVAKDAIEADGVKVTDTVEELYSTCDYISLHIPANQHTFKSINYELLSRMKAGA
                     TLVNTARKEVINEDDMLKIFAEYNKFKYLSDIAPDNKDILLNNYSDRCFFTPKKMGAQ
                     TAEANINAGKAAAHQIIGFIEEGNTTFKVNLNLIG"
     gene            complement(2332..>2621)
                     /locus_tag="QF480_03655"
     CDS             complement(2332..>2621)
                     /locus_tag="QF480_03655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004329216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="3-phosphoserine/phosphohydroxythreonine
                     transaminase"
                     /protein_id="HJN05687.1"
                     /translation="KKAGMLYDEIARNSLFKATVEDEEDQSLMNICFVMTEGNEDKEK
                     AFFDFATSKGMVGIKGHRSVGGFRASTYNALPVESVEALIATMQEFEAQHK"
BASE COUNT          755 a          507 c          402 g          957 t
ORIGIN      
        1 attttttctc attaccaacc aaagtagcag cggctgttct gtggtgacca tcagcaacat
       61 atgttgaagg caacttgcta aataactcaa ttatcctgtt gataatcgaa ctatctctga
      121 taacccaaaa gtgatgacca ataccatcgt cagctgtaaa atcaaaatct gcgttattag
      181 catccacata atcttcaatt atattgtcaa tttcggcaac agcaggatag gaaaagaaaa
      241 caggctccat atttgcatta gtaatgcgaa catgtttcat tctatcttct tccttatcag
      301 gcctggtaag ctcatgtttc ttaataacat tattcatgta atcatctaca ctggcacagc
      361 ctacaatacc atattgagtt ttgccaaaca ttgtttgtgc atagatatag agataatcct
      421 tttcatcctg ttttaaccac ccagctgcct taaactcttc aaagttatcc tttgctttgt
      481 tgtaaacttc ctgattatat aaattaatat tgtcatcaag atcaatttct ggtttaatga
      541 tatgtaataa agagtagata ttgccagatg cttcatctcg agcttctgaa gagttaagta
      601 cgtcataagg acgtgatgct aactccttta caatgttttt gggagggcga tatcctttaa
      661 aagcttttag tattgccata taaccaataa atatttagtt aaacacgact tttcagcaga
      721 atttacagat ttaattatct gtttccttgt tatagtttgg atcatcaaca ttttcatatt
      781 tggttcttct ttcgtttgcc tcattccctt ttccgttata acgataattg ttgttatgat
      841 ttccattatt gcttgcacca atcgaacgct gaagtgaaga aataagagct cctatcatct
      901 ttgtcatttc catcagctcg tttctggaat cattttcatg tgtttcagaa atattgtttt
      961 gtttgtacga aagagttgta aaaataagac attccctgat ggaactttta gccattttta
     1021 aataataaat aaactggttc ttatttctgg ctgatccttc agcaatgaag aaagctatgt
     1081 ttcttgccga atcattaaat cggtgtacaa attgcaaatt attatcaggg aatagcattg
     1141 ttacatcctg aagccagttg atatattcta aagatttatg ataaattctt aagtcttcaa
     1201 atctaaaaaa tgttcctgct ttttcaattt tttctatttg gtcgctcatg agataaagtt
     1261 aaatggttta ttatattata gttgttatat tattgtttag tagtctttta tattattcgg
     1321 ataccatgtt aattgtcttt gtaaatatga cttttaacct atgaggttta aatttacttt
     1381 gaaggttgta ttaccttctt ctatgaaacc aataatttgg tgagcagctg ctttaccagc
     1441 gttaatattt gcctctgcag tttgggcacc catcttctta ggtgtaaaga aacacctgtc
     1501 agagtagtta ttgagtaaaa tatccttatt atcgggcgca atgtctgata aatatttaaa
     1561 cttgttatac tctgcaaata tttttaacat gtcatcctcg ttaataactt ctttacgggc
     1621 tgtatttact aatgttgcac ccgctttcat tcttgacaac aactcatagt taatagattt
     1681 gaaagtgtgc tggttagccg gtatatgtag actaatataa tcgcatgtac tataaagttc
     1741 ttccactgta tcagtaacct ttactccatc tgcttcaata gcatcttttg caacaaatgg
     1801 atcgaatgca tatacctcca ttccaaatcc ctttgcgatt tttgcaacca gtttgcctac
     1861 gtttccataa gcatgaatac ccagtttttt acagcaaagc tcagtacctg aggtaccgtt
     1921 aaaatgatta cgtgcctgat aaaccatcat gcccattgcc agttcagcaa cagcatttga
     1981 gttttgcccc ggtgtgttca tcacaacgac atcatttttt gtcgctgctt caagattaac
     2041 attatcgaac cctgctcctg ccctaacaac aatttttagt ttcgttgcag catctataac
     2101 ttcgggtgta actttatcac tcctaactat cattgcttct gcatctttaa cagcatcaat
     2161 aagttcgtcc tgtccattat atttttcaaa aaatgtgcaa ttgtaaccgg catctttaaa
     2221 tatgcctcct atttcttcta ctgcagctgt agcaaagggt ttctctgtgg cgactaatac
     2281 ttttgtcata tcagtaatat ttatggttaa tttagaaaaa tatgagttct attatttgtg
     2341 ctgggcttca aactcctgca ttgtagctat taaagcttca acactttcaa ctgggagagc
     2401 gttatatgta gaggctcgga atccgcctac agatctatgt cctttaattc cgaccatgcc
     2461 ttttgaagtt gcaaaatcaa agaacgcctt ttctttatct tcattgcctt cagtcattac
     2521 aaagcatata ttcattaagg attgatcttc ttcatcttca acagtcgctt taaataagct
     2581 attcctggca atctcatcat aaagcattcc agcttttttt a
//
LOCUS       DASCQP010000220         5621 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000830433, whole genome shotgun sequence.
ACCESSION   DASCQP010000220 DASCQP010000000
VERSION     DASCQP010000220.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 5621)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5621)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5621
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000830433"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..319)
                     /locus_tag="QF480_03660"
     CDS             complement(<1..319)
                     /locus_tag="QF480_03660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05688.1"
                     /translation="MKKTTLKFLAIAMFFLMGTFVMAQTQYSITFQVDMTDADPFDPA
                     TDEIFMSSSFAGWPQPGTCAGCVMEPTGVGSMIYTNTATIDSGEVQYKYFRVINGEAS
                     WDHG"
     gene            complement(510..1517)
                     /locus_tag="QF480_03665"
     CDS             complement(510..1517)
                     /locus_tag="QF480_03665"
                     /inference="COORDINATES: protein motif:HMM:NF012742.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000976 - transcription cis-regulatory
                     region binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HJN05689.1"
                     /translation="MKRQVTIKDIAEKLGVSPSTVSRSLKDHPDISIKTRNAVKELAN
                     LLGYKPNLIALHLKNSRTNTIGLLVPEIEHHFFSSIINGIEEVAYQNNYNVLIVQSNE
                     SYLREVLNTQTLLGNRVDGMLVSFSKETKDFSHYQQLIDNEIPLVFYDRAVDELQADI
                     VVVDDYSGAYDAVTHLLNRGCRRVAFYSAPQHLLLGKDRLQGYIDAIKHHNMEFNKDL
                     VYSCDTFDSAVKISQSILKKVDRPDGVFAVNDLTAVGVMKAAKRLGIKIPEELKIVGF
                     ENSNKASICEPELTSVDQFGYHLGKKAMNILLDRIKSNISKYEPVRHVIKTKLIIRGS
                     S"
     gene            complement(1617..2648)
                     /locus_tag="QF480_03670"
     CDS             complement(1617..2648)
                     /locus_tag="QF480_03670"
                     /EC_number="3.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005837320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004067 - asparaginase activity [Evidence
                     IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I asparaginase"
                     /protein_id="HJN05690.1"
                     /translation="MIEETSILIIYTGGTIGMIADKSTNVLIPFDFDNINEQIPELKK
                     FNYNLGFHSFDPSLDSSNMNPEVWIELAQIINKNYEDYDGFVVLHGSDTMAYTASALS
                     FLLENLNKPVIFTGSQLPLGVLRTDGRENLITAIEIAADKKDDTPIVPEVCIYFENRL
                     MRANRTTKYNAENFDAFVSGNLPLLAEVGIYIKYNKNIILKPNFKKLKVHKHMGTGVA
                     VLKLFPGISADFVHSFLSIPNLKAIVLESFGSGNAPSESWFLNPLCDSISNGIIVLNV
                     TQCMTGAVKHGKYETSVKLNDIGVISGRDITTEAALTKLMYLIGEEHDRNDIVRLLQL
                     SLRGEVTIR"
     gene            complement(2651..3418)
                     /locus_tag="QF480_03675"
     CDS             complement(2651..3418)
                     /locus_tag="QF480_03675"
                     /inference="COORDINATES: protein motif:HMM:TIGR00010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HJN05691.1"
                     /translation="MKLIDTHAHLYLDNFNTDRNEVIQGAVNQGVNTMLLPAIDRSTF
                     DAMMDLVKKFPDNCLPMIGLHPTSVNRNYEAEISFVERKLTEGDYVAVGEIGIDLYWD
                     STYVDQQKDAFRTLLKMAKEHNLPAVIHTRDSFDEIYAITNEESTENLKGVFHCFTGT
                     QDEARKIIDLGFLIGIGGIITFKNGGLAKTVQDLPIESLVLETDAPFLTPTPYRGKRN
                     QSAYLTFIAKRLAEVKNTSVEQIAEITTKNSVELFNL"
     gene            3462..4058
                     /locus_tag="QF480_03680"
     CDS             3462..4058
                     /locus_tag="QF480_03680"
                     /inference="COORDINATES: protein motif:HMM:TIGR00730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HJN05692.1"
                     /translation="MTRICVFCGSSMGNREEYRRAAKLVGEYFIDNNIELVYGGANVG
                     LMKIIADVVLAGGLKVIGIMPHMLIEKEVEHKGISQMITVETMAERKEKMMEVSDGFI
                     AMPGGFGTLDELIEILTHNQLRISDKPIGLLNVVGHYDNLLKFFDDATDSGFVRKEHR
                     DNIIVASNIEDLVEAMNAFKPVVIKKWIEDIKVESIED"
     gene            4128..4682
                     /locus_tag="QF480_03685"
     CDS             4128..4682
                     /locus_tag="QF480_03685"
                     /inference="COORDINATES: protein motif:HMM:NF024635.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HJN05693.1"
                     /translation="MKIIGITGTLGAGKGTIVDYLVNNMGFKHYSVRDFLIEEINKSG
                     LPVNRDTMTEMANKLRANHSPAYIIEQLYKKAKQDGSNAIIESIRTPGEVDFLKKQGK
                     FYLIAVDADPKIRYNRITLRATETDNISFKTFLANERREFTTSDPNKQNLSRCIEMAD
                     IVLQNNGNLPELHKQLENDLSRIK"
     gene            complement(4735..5442)
                     /gene="tsaB"
                     /locus_tag="QF480_03690"
     CDS             complement(4735..5442)
                     /gene="tsaB"
                     /locus_tag="QF480_03690"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009137762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HJN05694.1"
                     /translation="MAKILNIESSTSVCSVALSIDGEVASIQESYSKNSHSELITLFC
                     KKVVAEAGFNFSDLDAVSISKGPGSYTGLRIGVSTAKGFCYGLEIPLVSIETLTAMAH
                     GMKNTLDYNNSSDSILFCPMIDARRMEVYTALFSDTLIQVEKTSAKIIDKDSFTNYLS
                     AYKIIFAGDGAEKCKDVLDYHPNAIFINDFFPSANYLCKIAEQKYLAKDFENTAYFEP
                     YYLKDFVAGKPKVKGLR"
BASE COUNT         1839 a          989 c          945 g         1848 t
ORIGIN      
        1 caccatgatc ccagcttgct tcaccgttaa taaccctgaa gtatttgtat tgaacttcac
       61 ctgagtcaat tgtagctgta tttgtataga tcattgagcc aacccctgtt ggttccatta
      121 cacaaccagc acatgtacct ggttgtggcc atccagcaaa gctacttgac ataaatattt
      181 cgtcagttgc agggtcaaaa gggtcagcat cagtcatgtc aacctgaaag gttatgctgt
      241 actgtgtttg cgccataacg aaagttccca ttaaaaagaa catcgctata gctaaaaatt
      301 taagagtagt ttttttcata atacttattg tttagtgaat aataattagt ttctttctat
      361 ataaatttgg ttcaacacta caaaactaag ctataattat acaaatatca agtattaaca
      421 aagattttta atttttatgt aacacaggca ttttgactag gagtaagtat taactataac
      481 aaacgtttgc gtatgataca acgggtaaac taactcgatc cacgtattat tagtttagtt
      541 ttaattacat gtctaaccgg ttcatacttt gaaatattac tcttaattct atccaagaga
      601 atattcatag cttttttacc aaggtgataa ccaaactgat ctacagatgt aagttcgggt
      661 tcacaaatag aagctttatt actattttcg aatccaacaa tctttaattc ttctggtatt
      721 tttatgccta atctttttgc tgctttcatt acaccaacag ccgttaagtc atttactgca
      781 aataccccgt caggtctatc aactttttta aggatacttt gtgatatttt caccgctgaa
      841 tcaaaagtgt cacaagaata caccaggtct ttattaaatt ccatgttatg atgtttaatt
      901 gcatcaatat atccttgcaa cctgtcttta cctaataata aatgttgtgg tgcagaataa
      961 aacgctactc tgcgacagcc tctgtttaat aaatgagtta ctgcgtcata agctccggaa
     1021 taatcatcta caacaacaat atcggcttga agttcatcaa cagcacgatc gtaaaaaacc
     1081 aaaggtatct cattatcaat taattgttgg taatgtgaaa aatctttagt ttccttggag
     1141 aaagatacaa gcataccatc aactctgttt cctaatagtg tttgagtatt caacacttca
     1201 cgaagatatg attcgtttga ttgaacaata agcacattgt aattgttttg gtaggcaacc
     1261 tcttcaatgc catttataat gctggaaaaa aagtgatgct cgatctcagg tactagtaat
     1321 ccaattgtgt ttgtgcggct gtttttaagg tgtagagcaa ttaagttagg tttataaccc
     1381 aataaattag ccaattcttt aaccgcattt ctcgttttta tgcttatgtc aggatgatcc
     1441 ttcaatgagc gagaaacagt tgacggagat acgcctagct tttcagctat atcctttata
     1501 gttacctgtc gcttcataat aatactagaa catcaagatt aaaagttagt gcaaagttgg
     1561 taaattttat gatagtatat aaaagtgtgt tcagatagtt aatttaatta aaatatctac
     1621 ctgattgtta cctcgccacg taatgacagc tgtaatagtc ttacaatgtc atttctgtca
     1681 tgctcttcac caattagata cattagcttt gtgagtgctg cctcggttgt tatgtctctt
     1741 ccacttataa cccctatgtc attaagtttc acgcttgttt catatttgcc atgtttaaca
     1801 gcaccagtca tgcattgggt tacatttaga acaataatcc cgttacttat tgaatcacac
     1861 aaaggattta aaaaccagga ttccgaaggt gcatttccgg atccgaaact ctcaagcaca
     1921 atagctttta gattgggtat actgagaaat gaatgtacaa aatcagcact tatacctggg
     1981 aatagtttta atacagcaac tccagttccc atatgtttgt gcactttaag ctttttaaag
     2041 tttggcttaa gtattatgtt cttgttatac ttaatataaa tcccaacctc cgcaagtaat
     2101 ggtaaattgc cagatacaaa agcatcaaaa ttttcagcat tatattttgt tgttctgtta
     2161 gcacgcataa ggcgattttc aaaataaatg catacttcag gaacaatcgg agtatcatct
     2221 tttttgtcag cagcaatttc aatagcagtt atcaggtttt cacgaccatc tgtacgcaat
     2281 actccgagag gtagttgtga ccctgtgaaa attacaggtt tgttcagatt ttccaacaga
     2341 aaacttaagg cagaagcagt atacgccatt gtatctgagc catgtagtac tacaaatcca
     2401 tcatagtctt cgtaattttt atttatgatt tgagccagct caatccaaac ttctggattc
     2461 atgttagatg aatcaaggct tggatcaaaa ctatgaaaac ccagattata attaaacttt
     2521 ttaagttctg gaatctgttc attaatgttg tcaaaatcaa aaggtataag gacatttgtg
     2581 ctcttatcag cgatcatgcc tatcgtaccc cctgtataaa ttattagaat cgaagtttct
     2641 tcaatcatat tcataaatta aataattcaa ctgaattttt agtggtaatt tctgctattt
     2701 gctcgacact cgtattctta acctcggcta atcttttagc aataaacgta agatatgcac
     2761 tttgattacg cttaccgcga tatggcgtag gtgttaaaaa aggggcatcg gtctctaata
     2821 ccagagattc aataggtaaa tcttgaactg ttttggctag tccaccgttt ttaaaagtga
     2881 ttattcctcc tatccctatc aaaaaaccta aatcaataat cttcctggct tcatcttggg
     2941 tgccagtaaa acaatgaaat acacctttta agttttcggt tgactcctca ttggtaatcg
     3001 cgtaaatttc atcaaacgaa tcacgagtat gtataacagc cggaagattg tgttcttttg
     3061 ccattttaag tagcgttcta aaagcatctt tttgttgatc aacgtaagta ctatcccaat
     3121 ataagtcaat gccaatttca ccaacagcta cataatcacc ttctgttaac ttgcgttcaa
     3181 caaaacttat ttctgcttca taatttctat taacagatgt tgggtgcaat ccaatcatag
     3241 gtaaacagtt atctggaaat ttttttacca aatccatcat cgcgtcgaaa gttgacctat
     3301 caatagctgg taacagcatt gtattaacgc cctgattaac tgcaccttga atcacttcat
     3361 tgcgatctgt attaaaatta tctagatata aatgagcatg cgtatcaatt aatttcattt
     3421 agcaaaatta acctaaattt gtctctcaaa aataaagcac tatgacaaga atttgtgttt
     3481 tttgtggctc aagtatgggt aatagggaag aatatcgtag ggccgcaaaa ctagttggtg
     3541 aatattttat tgataataat atcgaacttg tatacggtgg tgctaatgtt gggttaatga
     3601 aaattattgc agatgttgtg ctagccggcg gcttaaaagt aattggtatt atgccacata
     3661 tgcttattga aaaagaagta gaacataagg gtataagtca gatgatcacc gtagaaacta
     3721 tggcagagcg caaagaaaag atgatggagg tatccgatgg ttttattgct atgccaggtg
     3781 gatttggaac tcttgacgag ttaatagaaa tacttacaca caatcagttg aggatatctg
     3841 ataagcccat tggcttgtta aatgtagtag gtcattatga taacctgttg aaattttttg
     3901 atgatgctac cgattctggc tttgttagga aagaacatcg agataatata atcgttgctt
     3961 ccaatatcga agatttggtt gaagcaatga atgcatttaa acctgtcgtt attaagaaat
     4021 ggattgaaga tattaaagta gaaagtattg aggattgaat tggaggtaga aagcaagaaa
     4081 actaaaactg tttccatgca taatatccca gtaactaacc attcgaaatg aaaattattg
     4141 gaataacagg aactttggga gccggcaaag gcactatagt agattacctt gtaaataata
     4201 tgggatttaa gcattactct gttagagatt ttttaattga agagattaat aaatcaggac
     4261 ttccggttaa tcgtgataca atgactgaaa tggctaataa actaagagcc aatcattcac
     4321 ctgcatacat tattgaacaa ctgtataaaa aagcaaagca agatggtagt aatgccataa
     4381 tcgaaagtat acgaactcct ggggaagtag atttccttaa aaaacaaggc aaattttatt
     4441 taattgctgt tgatgctgac cctaaaatca gatacaaccg aattaccttg cgtgctactg
     4501 aaactgacaa cattagtttc aaaacatttc tggcaaacga aagaagagaa tttaccacat
     4561 cggacccaaa caaacaaaac ctgagcagat gcattgaaat ggctgacatt gtgcttcaaa
     4621 ataatgggaa tctacctgag ctacacaaac aattggaaaa tgacttgtcg aggataaaat
     4681 agactatgtt gtaatactct ttgtgtttac ttgaatattc tattgtgaaa ataactatct
     4741 aagtcctttt acctttggtt tacctgcaac gaagtctttt aggtaatatg gttcaaaata
     4801 tgcagtattt tcaaaatcct ttgccaaata cttttgttct gcaatcttac ataaataatt
     4861 ggcagaaggg aagaagtcat ttataaaaat agcatttgga tgataatcca atacgtcttt
     4921 acatttttct gcaccatcac cagcaaaaat tattttatat gcagataaat aattggtaaa
     4981 cgaatcttta tcaatgattt ttgctgatgt tttttcaacc tgtataagtg tgtccgaaaa
     5041 caaagctgtg tagacttcca ttcgtctagc atctatcatc ggacagaaaa gtattgaatc
     5101 tgaactatta ttataatcca gtgtgttttt catgccatgt gccattgctg ttaatgtttc
     5161 tattgaaact aaaggtattt caagtccgta acaaaatcct tttgcagtcg acacgcctat
     5221 acgaaggcct gtataagatc ccgggccttt actaatagat actgcatcaa ggtcagaaaa
     5281 attaaatccc gcctcagcaa ctactttttt gcaaaagaga gtaataagtt cagagtgaga
     5341 attttttgag tatgattcct gaatggaagc aacctcacca tcaattgaga gggcgaccga
     5401 acaaacactt gttgatgatt caatatttag aatctttgcc aaacctacta cttaacattt
     5461 aaaacaaagt acataaacgt acatttgtaa cgtggcttaa attaatgtta tacaacagta
     5521 ctattctaat cttcatccga tttgaaaagg tcttttttat caactttttc aactttagca
     5581 ttatttttta aagtttttga aacagccctg taaggcccaa c
//
LOCUS       DASCQP010000221         2704 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000833406, whole genome shotgun sequence.
ACCESSION   DASCQP010000221 DASCQP010000000
VERSION     DASCQP010000221.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2704)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2704)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2704
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000833406"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(112..987)
                     /locus_tag="QF480_03695"
     CDS             complement(112..987)
                     /locus_tag="QF480_03695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013547839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HJN05695.1"
                     /translation="MDAQEIFKKVRKIEIKTRGLSNQIFSGEYHSVFKGRGMAFSEVR
                     EYQFGDDIRNIDWNVTARFNHPFIKIFEEERELTVMLLIDVSGSNNFGTQSQLKQDVV
                     TEIAAVLSFSAIQNNDKVGVIFFSDKIEKFIPPKKGTTHILRIIRELIDFKAENSGTN
                     IAEALRYLSNAIKKKSTAFIISDFIDEGMEKAIQIANYKHDLIAIRITDEREKEMPNV
                     GMVRMLDAETGKKMWIDTSSSKVRKLYANRVASKTDSLDGMFARFGVDMVKIYTGKDY
                     VAPLMNLFKKREARR"
     gene            complement(1032..2024)
                     /locus_tag="QF480_03700"
     CDS             complement(1032..2024)
                     /locus_tag="QF480_03700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008149530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HJN05696.1"
                     /translation="MLETDIRELNEKIQRESQFADLIQLEMNKVIIGQKHMTERLMIG
                     LLANGHILLEGVPGLAKTLAITSLANIIDAKFSRIQFTPDLLPADLVGTMIYSQKKEE
                     FMVKKGPIFANFILADEINRSPAKVQSALLEAMQERQVTIGETTFKLEEPFLVMATQN
                     PIEQEGTYPLPEAQVDRFMLKVVINYPKKEEEKLILRQNITNAQSKTNTILKTNDIIK
                     AREIVREIYLDEKIENYITDIVFATRYPSDYKLSSFSGMIQYGASPRASINLALAAKA
                     LAFLKKRGYVIPEDIRAVAHDVMRHRIGLTYEAEAENITSEDIINEILNSVEVP"
     gene            complement(2312..2506)
                     /locus_tag="QF480_03705"
     CDS             complement(2312..2506)
                     /locus_tag="QF480_03705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05697.1"
                     /translation="MDTKTSTDNHPGGNKIKESKVLKRFIDQYYLYVKVEESKDPQGY
                     ERKLIDAYIDEFGEKPPLNG"
BASE COUNT          811 a          478 c          429 g          986 t
ORIGIN      
        1 atcgagtgat gaccaggcac catgctgctg tgcttttacc ccattaatgt acagcacaga
       61 caaaatgaga aatgatatgt atattatgtg cttcatagta taatataatc tctatcttct
      121 tgcttcgcgt tttttaaaca aattcataag gggtgctaca taatctttgc ctgtgtatat
      181 cttgaccatg tcaactccaa aacgggcaaa cataccatct aacgaatctg ttttggaagc
      241 aaccctgtta gcatatagtt tcctgacttt tgagcttgaa gtatcaatcc acattttttt
      301 accagtttca gcatcaagca ttcgaaccat tcctacgttt ggcatttctt tctcccgctc
      361 atcggtaatc ctaatggcaa tcaaatcgtg tttgtaattt gctatttgga tcgctttttc
      421 cattccttca tctataaaat cggagataat aaaggctgtt gatttctttt ttattgcatt
      481 ggaaagatat cgcaaagctt cagcgatgtt tgttccacta ttttcagctt tgaaatcaat
      541 taactccctt attattctta gaatatgagt agtacctttc tttggtggga taaatttctc
      601 aattttgtcg ctaaaaaaga ttacaccaac cttatcatta ttttgaattg ccgaaaaaga
      661 tagcactgcg gcaatttcag taactacatc ttgcttaagt tgactttggg ttccaaaatt
      721 atttgagcct gacacgtcta ttagcagcat cactgttaac tctctttctt cttcaaatat
      781 ctttataaat ggatgattaa atctggctgt aacattccaa tcgatattcc tgatatcatc
      841 tccaaattga tattctctta cctcactaaa ggccattccc cttcctttaa atacactatg
      901 atattcaccg gaaaatatct ggttcgacaa tcctcttgtc ttaatttcaa ttttcctaac
      961 ctttttgaag atttcctgtg cgtccaattt tgtgagttaa gagtaaaaag ttattagttt
     1021 taagaaatac gttaagggac ttcaactgag ttaagtattt catttattat gtcttcactt
     1081 gtaatgtttt cagcctcagc ttcgtatgtc aaaccaatcc tgtgacgcat tacatcgtgt
     1141 gctacagcac gaatatcttc aggaattaca tacccgcgtt ttttaaggaa tgcaagtgct
     1201 ttggcagcaa gtgctaaatt aatactagcc cttggcgatg caccatattg tatcattccg
     1261 gaaaaactac ttaatttgta atcacttggg tatctcgtgg caaaaacgat atcggtaata
     1321 taattttcaa ttttttcgtc aagataaatc tctctaacaa tttctcttgc tttaataata
     1381 tcattagttt taagaattgt attcgtttta gattgagcgt ttgtgatgtt ttgtcgcagg
     1441 attagttttt cttcttcctt tttaggatag tttataacaa ctttcagcat aaatctgtca
     1501 acctgagctt ctggcaaagg atatgttcct tcctgctcaa ttgggttttg ggtagccata
     1561 accaagaaag gctcttcaag tttaaaggta gtttcaccaa ttgtgacctg tctttcctgc
     1621 attgcttcca ataaagcact ttgtactttt gcaggtgatc tgttaatctc atcagcaaga
     1681 atgaaattag caaatattgg acctttttta accataaatt cttccttttt ctgactataa
     1741 atcattgtgc caactaggtc agcaggaagt aaatcaggag taaattgtat acgactgaat
     1801 tttgcatcta taatattagc tagcgaagta atagctaaag tcttagctaa tcccgggact
     1861 ccttccagga gtatgtgtcc attggcaagt aatccaatca ttagcctttc ggtcatgtgc
     1921 ttttggccaa tgattacttt gttcatctca agctgaatta aatcagcaaa ttggctttcg
     1981 cgttgaattt tttcgtttaa ttcccttata tctgtttcta gcataattat gtgattttct
     2041 gaaaacgcaa aaataggaaa ttacgttttt agttggtgtt aataattgtt aaagggaaga
     2101 tagggcataa agttaagaaa tgtctataat gatacatgat taagggtagt acgttttact
     2161 ctgggatggt gctcaactaa ttgccaaaat cagattggta ctaaaacact atttgaaata
     2221 agttagatga cctacttgaa aatttaaatt gttaaaagct agtactgtat ggaaacaagt
     2281 gtattgaaac caaggattaa tctatttaat ttcagccatt taatggtggt ttttcaccaa
     2341 attcatcaat ataggcatca attaattttc tttcataacc ttgaggatct ttagactctt
     2401 ctactttaac ataaagataa tattgatcta taaatctttt taatacttta gattctttaa
     2461 ttttattacc tcctggatga ttgtctgtag atgttttcgt atccatcgag ttaataaaat
     2521 atcttaatct tgtaccaaca ctttgtttat gcgattcccc gatatatgta tagtttcagc
     2581 aaaaagtgaa cttttcacga gtcaaattta agatatatat tttataattt tattaatctt
     2641 aaaaagtaaa gaaaatggct aggaagaaaa gtgcaacttc actaattagt gatttaaaaa
     2701 ggaa
//
LOCUS       DASCQP010000222         1625 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000840774, whole genome shotgun sequence.
ACCESSION   DASCQP010000222 DASCQP010000000
VERSION     DASCQP010000222.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1625)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1625)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1625
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000840774"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1202)
                     /locus_tag="QF480_03710"
     CDS             complement(<1..1202)
                     /locus_tag="QF480_03710"
                     /inference="COORDINATES: protein motif:HMM:TIGR00797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HJN05698.1"
                     /translation="MKDLTTGKEGKRILNFAIPMLFGNVFQQLYNVVDSIIVGKVIGD
                     EALAAVGANFPFIFALISFVVGIAIGATIIIAQYFGAKQMENMKRTIDTLFIFMFFAS
                     IIITLVGIWLSKYVFEMIDLPADVAPMAIQYFNVYAIGFIFFFGFQGTSAILRGLGDS
                     KTPVYFLIGSTILNIALDLLFVVVFRWGIVGVAAATVISQGCAFFAIIWYINKFHRLI
                     DISPLKMRFDMSIFKKSLRIGLPTGFQHTFVALGFLALYRIVNVFGTPTIAAYSIAMR
                     IDSFAVMPAMNFSAAISTFVGQNIGANKFERIGKGLKSTLLMINSISLAVTIFAVIFA
                     GPLISLFTDSKEVIEIGKQYIYIVTPFYIVFSTMFILNGLLRGAGDTFIPMIITLLAL
                     WAVRLPTS"
     gene            complement(1257..1529)
                     /gene="tatA"
                     /locus_tag="QF480_03715"
     CDS             complement(1257..1529)
                     /gene="tatA"
                     /locus_tag="QF480_03715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006800774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HJN05699.1"
                     /translation="MIQHCGWIGGPEIIIILIVVILLFGGKKIPELARGLRKGIRDFK
                     KATEDSGIKNDIKDVTSEIHDLKSGVNKINPKNILKTDNLQKPKKK"
BASE COUNT          577 a          302 c          256 g          490 t
ORIGIN      
        1 catgatgtag gcagtcttac agcccataat gctaacaagg tgataatcat agggataaat
       61 gtatcacctg ctcctctaag taggccattt agaataaaca tggttgaaaa gactatataa
      121 aatggagtta cgatgtaaat gtactgtttg cctatttcaa taacttcttt actatcagta
      181 aaaaggctaa ttagcggacc ggcaaaaatt accgcgaaaa ttgtaactgc aagagatatt
      241 gaattaatca tcaacaaagt agattttaaa cctttaccga ttctctcgaa cttattagct
      301 ccaatattct gtccaacaaa agttgaaata gccgcggaga agttcattgc aggcataact
      361 gcaaacgaat ctattcgcat agcaatacta tatgcagcaa tcgttggagt tccaaataca
      421 ttaacaatcc tgtatagtgc taaaaatccg agagcaacaa aagtatgttg gaagcctgta
      481 ggtaatccga tccgtaaact tttcttgaaa atactcatat caaatctcat cttaagtgga
      541 gaaatatcaa tgaggcgatg gaatttattt atataccaaa taattgcgaa aaaagcacat
      601 ccttgtgaga ttacagttgc tgctgccaca ccaacaatac cccatctaaa cacaacaaca
      661 aataataaat cgagcgcgat gtttagtatg gttgatccaa ttaaaaaata gacaggtgtt
      721 tttgagtctc ctaatccacg gagaatggcg cttgtaccct gaaagccaaa aaagaaaata
      781 aatccgattg cgtaaacatt aaaatactga atggccatgg gtgctacatc cgcaggcaaa
      841 tcaatcatct caaatacata tttactcaac caaattccaa ccagcgtaat aattattgac
      901 gcaaaaaaca taaaaataaa taatgtgtcg attgtgcgct tcatgttttc catttgtttt
      961 gcgccaaaat attgagcaat aattatagtt gctccaattg caataccaac aacaaatgaa
     1021 ataagagcaa aaatgaaagg gaaatttgca ccaacagcag caagggcttc gtcacctatg
     1081 actttaccaa caataatgct gtcaacaaca ttgtaaagtt gttgaaatac atttccgaaa
     1141 agcataggta tggcgaaatt caatatccgt ttgccctctt taccggttgt tagatctttc
     1201 aattaagtta tgttagagta ttactaatga taataagcag gataaacttt ctgtggttat
     1261 ttttttttag gtttttgcaa attatctgtc tttagtatat ttttcggatt aattttgttt
     1321 acacccgact tcaaatcatg tatttctgag gtaacatctt ttatatcatt tttaatgcca
     1381 ctatcttcag ttgctttctt aaaatcacga atgccttttc taagccccct ggctaattca
     1441 ggtatctttt ttccgccaaa taataggatt acaactatca gtatgataat tatctcagga
     1501 ccaccaatcc atccgcagtg ctgtatcata ataaaaaagt taattcgtac aatttgtaaa
     1561 agtcattcca ataagagtta tacaatgaaa caatgaatgc tcaaatccca taacaagtat
     1621 ttaaa
//
LOCUS       DASCQP010000223         4872 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000843837, whole genome shotgun sequence.
ACCESSION   DASCQP010000223 DASCQP010000000
VERSION     DASCQP010000223.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4872)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4872)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4872
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000843837"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(25..1878)
                     /locus_tag="QF480_03720"
     CDS             complement(25..1878)
                     /locus_tag="QF480_03720"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN05700.1"
                     /translation="MKKLLLIAFTIIFASTISAQKHVLRSTEFPVHSAPEKVPKSKSN
                     IGTVTKPDIAKEQAAGSSTTYIPLGQSNNINGFQGNSRTYLWADPNLNSVVFTHKGID
                     EIPALNFDVSTDGGSTWSINNVINVPDLDLSFAQGGIINEEGNTNPDDAYYTYFNSIT
                     NGLSYGVNILTNTSTPNFSYVNHVIDSAEFDVTNAFTITQQGVAWNVGIKTEPIDNNY
                     NGQLLVSNATVDNGTVQYQDTIFDFLAPLDGINDEKIAFAPDGQTGYIMILSDSESDP
                     QPYTNYHPVLLKTIDGGVSWSDPIHVQLGGVDGIESIKNYWSDEVMEEVYGAGFNRDE
                     IYYNLGYHADIIVDYNGNPHITGIIALGTEDGWYPNEGTMATWHVYSDDGGDTWVADP
                     LYDNIFLDGDIGGVAQYNRPYAASSFDGAALFFSWIDTDLDGAEGNINPNIFTLGYCA
                     SESTYTEVENVTALSLYWFSAFFGCMSQYVFEYESGNGYEYEIPFVFAEFSNPYINYW
                     YIDDYSLSTGNPCNPISIDEKKFCHYPTVSQNSPNPATNFTEILVTTEINGVISLSIG
                     NILGQVVHQESATNNSLTHTFDIDVSSLDAGIYFYTVEIGNSSITKKMVVK"
     gene            complement(2040..3977)
                     /locus_tag="QF480_03725"
     CDS             complement(2040..3977)
                     /locus_tag="QF480_03725"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN05701.1"
                     /translation="MKKLLLTVLAFAIGLTSFSQTRHVVRSTKAPNTELLLEKAPQQS
                     ARTIMASEKPAPKTETINGVSATYIPIGQAGNAYGFYFGPRTYLWADNNLNSVVFTHR
                     MTGGTEVEGNSRVSYDVSTDGGATWETNVQVYTPLGPGPQYPEAAGRYPQGGIINPEG
                     NTDPANAHYAYFIATIINTNNIWGGYAYGSNVLTETDPSNPSQVNLGFEPGYYRTVPD
                     AFTITQQAVAWYLEPSVDLSSGSAEYTGDLILGRGEMDGGVIVYEEELIGFLAPLDGM
                     NDSKIAFAPDGQTGYILVMSDSEGDPQPYTNYHPILLKTTDGGDSWSDPIHVLLGGED
                     GNETLKNYWSDEIMEELYGAGFNRDEIYYNMGYQCDIIVDGQGNPHITGIIALGTEEG
                     WYPNEGTMATWHVYSDDGGATWAADALYDNIWLQGEPAGLVMYNRPYAASTMDGHYLF
                     FSWIDTDLEGAEANTNPNIFVTGYDSEDNTYYEGGVQNVTALSLYWFSAFYGSMSQYV
                     FSEDNGGPWDIEIPFVFTEYTVPGDPAAEMNFYYIKGFTIPMLVGIDSHEGLANFVVS
                     QNSPNPAVNSTSILVTTETSGVINLRVNNILGQVVHQESVDNSALAHTFNVNVSNLES
                     GIYFYTIEIGKSSITKKMLVK"
     gene            complement(4142..>4872)
                     /locus_tag="QF480_03730"
     CDS             complement(4142..>4872)
                     /locus_tag="QF480_03730"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN05702.1"
                     /translation="YSDDGGSTWVADPLYDNIFFDGDIGGLGQWNRPYAASTIDGHYL
                     FFSWIDTDLEGAEGNTNPNIFVVGYDSEDHTYYEGGVQNVTALSLYWFSAFYGSMSQY
                     VFADLDEPAEIWNCEIPFVFTEYTVPGDPAAEMNFYYVKGFSLPMPVDIDSHEGLANF
                     SVSQNSPNPATNSTSILVTTEKAGVIDLRISNILGQVVHQESVSNSALAHTFNVNVSN
                     LESGIYFYTIEIGTSSITKKMLVK"
BASE COUNT         1571 a          987 c          791 g         1523 t
ORIGIN      
        1 agttttagaa accacaaagt ttgcttactt cacaaccatt ttctttgtta tcgagctatt
       61 tccaatttcg actgtgtaga aataaattcc tgcatctaaa ctactaacat caatatcaaa
      121 agtgtgggta agtgagttgt tagtagcact ttcctgatgg acaacctgac ccagaatatt
      181 accaatgctt aggctaatca cgccatttat ttcggttgtc accaaaattt cagtaaaatt
      241 tgttgccgga ttgggtgaat tttgtgaaac tgttggataa tgacaaaact ttttttcatc
      301 aatactaata ggattacatg ggttgcccgt cgacaaacta tagtcatcaa tataccaata
      361 attaatataa ggattagaaa actcggcaaa aacaaaaggt atttcatatt cgtaaccgtt
      421 cccagattca tattcaaaaa catactgact catgcatcca aagaatgcac taaaccaata
      481 aagacttaat gccgtgacat tttcaacttc cgtataagtg ctttcagatg cacaataccc
      541 taaagtaaat atatttgggt taatattacc ttcagcacca tcaaggtctg tatcaatcca
      601 tgagaaaaac aaagcagctc catcaaaaga ggaggcagca taaggacggt tatattgagc
      661 tacaccccct atatcaccat caagaaaaat attatcatat aaaggatctg caacccatgt
      721 atcgccccca tcgtcagaat aaacatgcca tgttgccata gtaccttcat ttggatacca
      781 tccatcttca gtaccaagtg caattatacc tgtaatatgt ggattaccat tataatcaac
      841 aattatatct gcatggtaac ctaagttata ataaatttca tccctgttaa atcctgctcc
      901 atatacctcc tccataactt catcagacca ataatttttt atggactcta taccatcaac
      961 acctccaagt tgcacatgaa taggatcgct ccaacttaca ccgccatcaa tggttttcaa
     1021 aagcacggga tgataatttg tatatggttg tggatcactt tctgaatcac ttaaaatcat
     1081 tatatatcca gtttgtccgt ctggcgcaaa tgcaattttt tcatcgttga ttccgtctag
     1141 tggagcaaga aaatcaaaaa ttgtatcctg atattgaacc gtcccattat caaccgtagc
     1201 gttgctaact aataattgtc cattataatt attatcaata ggctcagtct ttattcccac
     1261 attccaggca acaccctgtt gcgtaatcgt aaatgcatta gttacatcaa actcagcact
     1321 atcaattacg tgatttacat atgagaagtt aggtgtagaa gtatttgtaa gtatattaac
     1381 tccataactt agtccattgg ttatactatt aaaataagta taatatgcat catcaggatt
     1441 ggtattacct tcttcgttaa taatccctcc ctgtgcaaag gacaaatcta aatcaggtac
     1501 attaataaca ttatttatgg accatgttga tcccccatct gttgaaacat caaaattcaa
     1561 tgctgggatt tcatcaatac ctttatgagt aaataccacg ctattcagat ttgggtcagc
     1621 ccaaaggtag gttcgtgaat ttccttgaaa accattaata ttattcgatt gcccaagagg
     1681 tatataagtt gtgctgctac ctgctgcttg ttcttttgcg atatcaggtt tagtaactgt
     1741 tccaatatta gatttgcttt tgggtacttt ttcaggtgca gaatgaacag gaaactctgt
     1801 actcctaaga acatgttttt gagcactaat tgtactagca aaaataattg taaatgcaat
     1861 taacagtagc tttttcatat ttaatgtttt taggttatag caccaaagtt acaataaata
     1921 aaaaggacga acaacttagt gcataataaa ataagaccta agaaatcaaa taatggttgt
     1981 catttaaata aaaaaaggct gccaaaactg acagcctttt tttaataata ttagaatgct
     2041 tatttcacaa gcattttctt tgttatcgaa ctctttccaa tttcaattgt gtagaaataa
     2101 atccctgatt ccaaattgct aacatttaca ttaaaagtgt gtgcaagtgc gctgttatct
     2161 acactctcct gatgaacaac ctgtccaaga atattattaa ctcttaggtt aataacacct
     2221 gatgtttctg ttgttaccag aatactagta ctattaacag ctgggttagg actattttga
     2281 gaaactacaa agttagccag tccttcatga ctatcaattc caactaacat tggtattgta
     2341 aaacctttaa tgtaatagaa attcatttca gcagccgggt cacctggcac agtgtattcg
     2401 gtaaacacaa atggaatttc aatgtcccac ggaccaccat tatcttcact aaagacatat
     2461 tgagacattg agccataaaa tgcgctgaac caatagaggc ttaatgctgt tacattttga
     2521 actccacctt cgtaataagt attatcctca gaatcataac ctgttacaaa aatatttggg
     2581 ttagtattgg cttcagcacc ttcaaggtcg gtatcaatcc aggaaaagaa tagatagtgt
     2641 ccatccatgg ttgatgcagc ataaggacgg ttatacataa ctaaacctgc tggttcgcct
     2701 tgaagccaaa tattgtcgta caatgcgtca gcagcccaag ttgcaccacc atcatctgaa
     2761 taaacatgcc atgtggccat tgtaccttca tttggatacc agccttcttc tgtgccaaga
     2821 gcaattatac cagttatatg tggattaccc tgaccatcaa caataatatc acattggtaa
     2881 cccatattat aataaatctc atccctgtta aatccggcac cataaagttc ttccataatt
     2941 tcatcagacc aataattttt taaagtttca ttaccatctt caccgccaag tagaacatga
     3001 attggatcgc tccacgaatc acctccatca gtagttttga gtaatattgg gtgataattt
     3061 gtatatggtt gtggatcacc ttccgaatca ctcataacga gtatgtatcc ggtttgccca
     3121 tcaggggcga atgcaatttt agaatcgttc attccgtcga gaggcgcaag aaaacctatc
     3181 aattcttctt catagactat cacaccacca tccatttctc ctcttccaag tattagatca
     3241 ccggtatatt cagcactacc actacttaaa tccacactag gttcaagata ccaagctact
     3301 gcttgttggg taattgtaaa ggcatcagga acagtcctgt agtagccagg ttcgaatcct
     3361 aaatttactt gagaaggatt agatggatcg gtttcagtaa gtacattaga accatatgca
     3421 tatccacccc agatattgtt agtattaata atcgttgcaa taaaataagc atagtgcgca
     3481 ttagcgggat ccgtattccc ttcagggttt attattcctc cctgagggta tctacctgct
     3541 gcttcaggat attgaggtcc aggccctaaa ggtgtataaa cctgcacatt ggtttcccat
     3601 gtagcaccac catcggttga tacatcataa gaaacacgac tattaccttc aacttcagta
     3661 ccacctgtca tacggtgagt aaacacaaca ctattaaggt tgttatcggc ccataaatag
     3721 gttctgggac cgaagtaaaa accgtaagca ttgcctgcct ggccaattgg gatatatgtg
     3781 gcagacactc cattaatagt ttcggtttta ggggcaggct tctcgcttgc cattattgtt
     3841 cgagcacttt gctgaggtgc tttttccaac aataattctg tattaggtgc ttttgtactt
     3901 cttactacat gcctggtttg tgaaaaggaa gttaaaccaa ttgcgaaagc taatacagta
     3961 agtaataatt ttttcatgat tttaaattta attaataata aaagaatttt aaagagtcat
     4021 tatgataaaa ggacataacg attctttatt cagttgctaa aattacgtaa ataaatttaa
     4081 aaatcacaga aaaaggccgc ctgtttaggc agccttttta aataagaatc tttttaaacg
     4141 cttattttac aagcattttc tttgttatcg aacttgttcc tatttcaatt gtatagaaat
     4201 aaattcctga ttccaggttg ctgacattta cattaaatgt atgtgcaagt gcactattac
     4261 ttacgctctc ctgatgtaca acctgaccaa gaatattgct aattcttaag tcaataacac
     4321 ctgctttttc tgtagttacc aaaatgctgg tactattagt tgccgggtta gggctatttt
     4381 gagatactga gaaattagct aatccttcat gactatcaat atcaacaggc atgggcaatg
     4441 agaatccttt aacgtaatag aaattcattt ctgcagcagg atcaccgggt acggtgtact
     4501 ctgtaaacac gaatgggatt tcacaattcc atatttccgc aggttcatca agatcagcaa
     4561 aaacatattg tgacattgag ccataaaatg cgctaaacca gtagaggctt aatgctgtta
     4621 cattctgaac tccaccttcg taataagtgt gatcttcaga atcataacct actacaaaaa
     4681 tatttgggtt agtattgcct tcggcacctt caagatcagt atcaatccat gagaagaata
     4741 gataatgtcc atcaattgtt gaagcagcat aaggacgatt ccactgacct aacccaccaa
     4801 tatcgccatc aaagaatata ttatcgtata atggatcagc aacccatgtg ctaccaccat
     4861 catctgaata aa
//
LOCUS       DASCQP010000224         3732 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000844256, whole genome shotgun sequence.
ACCESSION   DASCQP010000224 DASCQP010000000
VERSION     DASCQP010000224.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3732)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3732)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3732
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000844256"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..748)
                     /locus_tag="QF480_03735"
     CDS             complement(<1..748)
                     /locus_tag="QF480_03735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05703.1"
                     /translation="MLKYLASAIKDIILLSRDRAGLVMLFIMPAALIIIMTLLQDSTF
                     RVLEEKKLPILVLNFDKDTFGINIVESLKKSKFFKLVEQVGNGEKAERELKERVAKGS
                     FQIGIVIHKNATKLLRNNISYYIVQQLPDEDQLIFGDDTIMLQNASKISIYFDPVIKN
                     SFKQSITSALQGYSSSVEAKMMYSVYSALFRDLLGMELKNKGDLSNLVDFETLYASAD
                     DEILVPNSVQHNVPAWTIFAMFFIVIPLAGN"
     gene            complement(762..1514)
                     /locus_tag="QF480_03740"
     CDS             complement(762..1514)
                     /locus_tag="QF480_03740"
                     /inference="COORDINATES: protein motif:HMM:NF012235.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJN05704.1"
                     /translation="MNNDVVIEVKSLTKQYKNTQTVAVNELCLKVTHGEIFGLLGPNG
                     AGKTTTISILCNIINPTSGEITINGMNLKSDASSIKKIIGIVPQEIALFSNLTALENL
                     RYFGNMYGLKGNYLKERISSLLEIFGIEHKANERISTFSGGMKRRLNLITGILHSPKI
                     LFLDEPTVGIDVQSRSVIIDFLISINKLGTTIIYTSHHMDEAEKFCSRVAIIDVGKII
                     IEGSPQNLIKEHDNCYNLEDIFLEITGRNLRD"
     gene            complement(1515..2522)
                     /locus_tag="QF480_03745"
     CDS             complement(1515..2522)
                     /locus_tag="QF480_03745"
                     /inference="COORDINATES: protein motif:HMM:NF027495.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BtrH N-terminal domain-containing protein"
                     /protein_id="HJN05705.1"
                     /translation="MDVDIKFEHKQSAHCENGVVSNLLGYYGIELSEPMAFGIGSGLF
                     FSHMPFLKVGGIPVTSFRPLPGIIFKRISRRLGIKFEKHKYSKPPMAMDALDANLKKG
                     IPTGMLVGVYHLTYFPDPYRFHFNAHNIVVFGKKNSSYLISDPIMDRVETLTYNELLR
                     VRYAKGTFAPNGHMYWAVNIPQNINIERAIIKGIKHTCKDMLTIPIPMFGVKGIKFLA
                     KKVRSYPKKLGARRAASYTGQIVRAQEEIGTGGAGFRYMYGAFLQEASVVLKNDELVK
                     LSYEISDIGDLWREFAVITGRIVKNRNKADESYDKAADLLLVIADREKEFFIKLKKSI
                     V"
     gene            complement(2588..3004)
                     /locus_tag="QF480_03750"
     CDS             complement(2588..3004)
                     /locus_tag="QF480_03750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05706.1"
                     /translation="MKSKDVPQDDANMLQGKFKEPVYSLDEEGNYITVPSVGWDPKNA
                     VMQEAWDIVNEKVEKARQYVLSGKLSPIGYYIEKNIMDIGLVAKYMGVRKWKVKKHLA
                     PKNFAKLNDEMLEKYAKVFSISKEELVNIKLLSNVG"
     gene            complement(3015..3431)
                     /locus_tag="QF480_03755"
     CDS             complement(3015..3431)
                     /locus_tag="QF480_03755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05707.1"
                     /translation="MLADSKDIINLIPQKHPMIMVDGLISNDETLTVSKLSLNKNNIF
                     CNEGYFQVPGLIENIAQTAALRSGYEARENNKEPTIGFLGSVKNVIIHKLPNDNDILQ
                     TKLKILNRLTNVLIVKGELFVDNILMAEGEMNIFLQ"
     gene            complement(3539..>3732)
                     /locus_tag="QF480_03760"
     CDS             complement(3539..>3732)
                     /locus_tag="QF480_03760"
                     /inference="COORDINATES: protein motif:HMM:NF020130.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="3-oxoacyl-[acyl-carrier-protein] synthase III
                     C-terminal domain-containing protein"
                     /protein_id="HJN05708.1"
                     /translation="GIDLPEHKWFMNLPKIGNVGAASAMLMIEELFNSGNLNIGEKIL
                     VMVPESARFSYTYLLLTVV"
BASE COUNT         1191 a          739 c          506 g         1296 t
ORIGIN      
        1 tgttccctgc caaaggaata acaatgaaaa acatagcgaa gattgtccag gccggaacat
       61 tatgttgtac agaatttggt acaagaatct catcatcagc acttgcatat aatgtttcaa
      121 aatcaaccag attactgaga tctcctttgt ttttaagttc cattcctaat aaatccctga
      181 aaagagccga atatacacta tacatcattt ttgcttcaac tgaagatgaa tacccttgca
      241 gtgcactggt tatagattgc ttaaaggagt tttttataac cgggtcgaaa taaatgctaa
      301 tttttgaagc attttgcaac attatagtat catcaccgaa tataagttga tcctcgtcag
      361 gtagttgctg aacgatgtag taactaatat tgttccgcaa aagtttagta gcatttttat
      421 gaataacaat acctatctga aaactacctt tggcaacccg ttccttgagt tctctttctg
      481 ctttttcacc attacctacc tgctcaacta atttaaagaa cttagatttt tttaaacttt
      541 caacgatatt aattccgaaa gtatctttgt caaaatttag tactagtatt ggcaactttt
      601 tttcttcaag gactctaaat gttgaatctt gaagcagggt cattatgatt attaatgctg
      661 ccggcattat aaatagcatg actagtccag ccctatctcg tgacaggagt ataatatctt
      721 taattgctga tgctaaatat tttaacataa attaaaatag attaatctct cagatttctg
      781 ccagttattt ccagaaaaat gtcttcaaga ttgtaacagt tatcatgttc tttaatcaaa
      841 ttctgtgggc taccttcaat aattattttt cccacatcga ttatcgcaac ccttgagcaa
      901 aacttttcag cttcatccat gtgatgcgac gtataaataa ttgtagtacc aagcttatta
      961 atgctaatta aaaaatcgat tattacggaa cgcgactgaa catctatgcc aacagtaggc
     1021 tcatcaagaa aaagtatttt tggcgagtgt agaataccag ttattaagtt caagcggcgt
     1081 ttcattcctc ctgaaaaagt agatattctt tcatttgctt tatgctcaat accaaatatt
     1141 tcaagcagac ttgaaatcct ttcttttaaa taattacctt tcaaaccgta catatttcca
     1201 aaataccgca ggttttctaa tgcagtaaga ttagaaaaaa gagctatttc ctgtgggaca
     1261 atcccaataa tctttttaat actactggca tccgatttaa gattcattcc gtttattgta
     1321 atctcgccag aagtaggatt aattatatta catagaattg atatagttgt agttttccca
     1381 gctccgttgg gtcctaataa accaaagatt tcaccgtgag taacttttaa acatagctcg
     1441 ttaaccgcta ccgtctgagt atttttatac tgttttgtaa gtgacttaac ttctatgaca
     1501 acatcattat tcatttaaac tatgctcttc ttcagtttta taaaaaactc tttttctcta
     1561 tcagcgataa caagtaataa gtcggctgct ttatcataac tttcgtcggc cttattacga
     1621 tttttaacaa tacgccctgt tattacagca aattcacgcc aaaggtcacc gatatcagag
     1681 atttcgtatg aaagtttcac taattcatca tttttaagta ccacagaagc ttcttgcaaa
     1741 aaggcaccat acatatatct aaaacctgct ccacccgttc ctatctcctc ctgtgcccga
     1801 actatttgcc cggtataaga tgctgctctt cttgcaccta atttcttagg ataacttcta
     1861 accttttttg ctaaaaactt aattcctttt actccaaaca tagggatagg aatagttagc
     1921 atatctttac atgtatgctt aattccttta attatagccc tttcaatatt tatattctgt
     1981 ggaatattta ccgcccaata catatgcccg ttaggtgcaa aagtaccttt agcatatcgt
     2041 acccttagca gctcattata agtaagtgtt tcgactctgt ccattatcgg gtcactaatt
     2101 agatagctac tattcttttt tccaaaaaca acaatattat gagcattaaa atggaatctg
     2161 taaggatcgg gaaaatatgt gagatgatat actcctacta acattcctgt tggaatacct
     2221 tttttcaaat tcgcatctaa tgcatccatt gccataggtg gtttggagta tttatgcttc
     2281 tcaaatttaa ttcccaatct ccgtgagatt ctcttaaaaa ttattcctgg taatggtcta
     2341 aatgaagtaa caggaatccc tcccacttta aggaacggca tatgagaaaa aaataatcct
     2401 gaaccaattc caaacgccat aggctcactt aattcaatcc cgtaataacc taacaaatta
     2461 ctgaccacac cattttcaca atgtgccgat tgtttatgtt caaattttat atcaacatcc
     2521 attatttaaa agtactttga tattaatcat aatcctaccc actccatagc aaaaaacgaa
     2581 catacaatca tccaacattt gacaacaatt taatattaac aagttcttct ttacttatgc
     2641 tgaatacctt agcgtatttc tctaacatct catcgtttaa ttttgcaaaa ttttttggtg
     2701 ccaggtgttt ttttactttc catttcctca cacccatgta tttggcaacc agcccaatat
     2761 ccataatatt cttttcaata taataaccta ttggacttaa tttacctgag agcacatact
     2821 gccttgcctt ttcaactttt tcatttacaa tatcccatgc ttcctgcatt actgcatttt
     2881 ttggatccca tcctacagaa ggaactgtaa tataatttcc ttcttcatcg agcgaataaa
     2941 caggctcttt aaatttacct tgcaacatat tagcatcgtc ctgtggtaca tctttacttt
     3001 tcatacgatt gtacttattg taagaaaata ttcatttcac cttcagccat caatatatta
     3061 tcaacaaaga gctctccttt tacaattaac acattggtta accgatttaa aattttcaac
     3121 tttgtttgca ggatatcatt atcattaggt aacttatgaa taataacatt tttaaccgac
     3181 ccaagaaaac cgatagtagg ttctttatta ttctctctag cctcatatcc tgaccttaaa
     3241 gcagccgttt gagcaatgtt ttctatcaaa ccaggtactt gaaaataacc ttcattgcaa
     3301 aaaatattat ttttattgag ggagagtttt gacactgtta aagtttcatc attacttatc
     3361 aatccatcaa ccataatcat cgggtgcttt tgaggaataa gattgattat atctttacta
     3421 tcagctagca ttacaaaatt ggttacttat taatctcttt ccaaaaataa aaaaatacca
     3481 agttaatttg agaatatgga aatagtttga tgttgaactt atacttattg cataaaaact
     3541 aaacaacagt aagtaataaa tatgtgtaag aaaaccgagc actttcaggt accatgacaa
     3601 gaattttttc tcctatattg aggttacctg agttaaataa ttcttcaatc attagcatag
     3661 ctgaagctgc accaacattt ccaatttttg gcaaattcat aaaccattta tgttcaggca
     3721 gatcaattcc cg
//
LOCUS       DASCQP010000225         4129 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000844572, whole genome shotgun sequence.
ACCESSION   DASCQP010000225 DASCQP010000000
VERSION     DASCQP010000225.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4129)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4129)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4129
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000844572"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            8..1414
                     /gene="cysS"
                     /locus_tag="QF480_03765"
     CDS             8..1414
                     /gene="cysS"
                     /locus_tag="QF480_03765"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004329906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004817 - cysteine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006423 - cysteinyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HJN05709.1"
                     /translation="MNPPHVGMYVCGPTVYGDAHLGHARPAITFDIVFRYLIHLGYKV
                     RYVRNITDVGHLENDADEGEDKIAKKARLDSLEPMEVVKYFTDRYHSNMDQLNVLHPS
                     IEPTASGHIIEQIELIKTIVKNGYAYEVNGSVYFDVEKYNKEYNYGKLSGRKIEELLE
                     NTRNLAGQEDKKHSYDFALWKKSDPKHIMNWPSPWSQGYPGWHLECSAMGTKYLGEKL
                     DIHGGGMDLLFPHHESEIAQVVASRGHDPVKYWMHNNMITIAGQKMGKSLNNFITLEE
                     FFTGNHELLSHAYSPMTIRFFILQAHYRSTLDFSDEALQASEKGLHKLFKAIEVIEKL
                     APSEKSSVNIKRFETKLYDAMNDDFNTPIVLAHLFDLSKIINQVNDGKETLSVEDIEL
                     IKSLFDIFMFKLLGMKNEIIENNDQLIDQLMNTILVLRKDAKLNKDWATADRIRDELG
                     KININIKDTKDGVEWSFD"
     gene            1506..1889
                     /locus_tag="QF480_03770"
     CDS             1506..1889
                     /locus_tag="QF480_03770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007570487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HJN05710.1"
                     /translation="MKRVIYTDNAPAPIGPYSQAVENNGTLFISGQIPVNPSNGKVVP
                     GGVTEQTNQVLKNIKAIITAAGYGNDLSKIIKCTIFLNDMSLFAEMNAVYGTYFQVDP
                     PARAAFAVKELPLNVLVEIEAIAMI"
     gene            2002..2538
                     /locus_tag="QF480_03775"
     CDS             2002..2538
                     /locus_tag="QF480_03775"
                     /inference="COORDINATES: protein motif:HMM:NF015674.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF308 domain-containing protein"
                     /protein_id="HJN05711.1"
                     /translation="MTKSTRSNWWLLLLAGIIFLILAYKVMIHPAESIVGLAYFIGWA
                     ALIAGIFQVGFSVSSKHIVQNWAWRMFSGIINIVIGIIFLSHPAVTAQILPFFFGLWM
                     IFVGISVFFNSFREQNLNISGGWFDMLLGIILFIGGLWISFHPAEEAAMVVWLITLTL
                     LFYGIYFIVIALQFSKRK"
     gene            complement(2545..3120)
                     /locus_tag="QF480_03780"
     CDS             complement(2545..3120)
                     /locus_tag="QF480_03780"
                     /inference="COORDINATES: protein motif:HMM:TIGR00566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HJN05712.1"
                     /translation="MRLLIIDNYDSFTYNLVQLVEQAGVTDYIIVKNDELDKINPNDF
                     NRVLISPGPGIAREAGQLMWFLNRFYKTRPILGICLGHEAIAETFGAKLIPMNKPFHG
                     IKNKATILINDKIFNGLPITFNIGHYHSWNIDEQTIPDEIEIILKDEDNLNMAIRHRK
                     YNLVGLQFHPESIMTDYGLEIIKNWLSLSSN"
     gene            3250..>4129
                     /locus_tag="QF480_03785"
     CDS             3250..>4129
                     /locus_tag="QF480_03785"
                     /EC_number="2.6.1.85"
                     /inference="COORDINATES: protein motif:HMM:NF005486.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate synthase component I"
                     /protein_id="HJN05713.1"
                     /translation="MKNVINRINQLGKDRVPFLFIIDFDLENPVILPLTEVDPNNILF
                     SISGINNVPEIPSQITNELELKIYPVQKERYIKAFNHVQNHISHGDSFLLNLTLPSLI
                     ETNLSLKEIFLRSDAKYKLWLRNKFVVFSPEIFVQTRERKITSFPMKGTIDASLPDAK
                     NKLLNSKKELAEHYTIVDLIRNDLSMVAKNVKVEKFRYIDHVKTNRGGLLQMSSEISG
                     ELPANYNECIGNILFKILPAGSISGAPKRKTLEVIEEAEQYKRGFYTGIVGIFDGYNI
                     DSGVMIRYIEQTPEGMI"
BASE COUNT         1372 a          656 c          759 g         1342 t
ORIGIN      
        1 tgaaccaata aatccaccgc atgtgggcat gtatgtttgt gggccaactg tttatggaga
       61 tgcacattta ggtcatgcta ggcctgctat tacttttgat atagtttttc gttatttaat
      121 acatcttggt tataaagtcc gctatgttcg aaatattact gatgttggtc atcttgaaaa
      181 tgatgccgat gaaggtgaag ataagattgc gaaaaaggca agattagact cacttgaacc
      241 aatggaagtt gtgaagtatt ttactgaccg ttatcacagt aacatggatc aactaaacgt
      301 gcttcaccct agtatagaac caacagcttc aggtcatatt atcgagcaaa ttgagcttat
      361 taagacaatt gtgaagaatg gatatgctta tgaagtgaat ggatctgtat attttgatgt
      421 tgaaaaatat aacaaagaat ataattacgg aaaactatcc ggacgtaaaa tagaagaatt
      481 gttggaaaat acacgtaacc ttgccggaca ggaggataaa aaacacagct acgattttgc
      541 cctatggaag aaaagtgatc ctaaacatat aatgaactgg ccatctccat ggagccaggg
      601 ctatccgggg tggcatctag aatgctcggc aatgggtact aaatacctgg gcgaaaagtt
      661 ggacatacat ggcggtggta tggatttgct cttcccacat catgaatcag aaatagctca
      721 ggtagttgct tcacgtggac acgacccagt taagtactgg atgcacaaca atatgatcac
      781 aattgctggt caaaaaatgg gaaaatcgtt aaataatttc atcacactcg aagaattttt
      841 taccggaaac catgagttgt tgtcacatgc ctatagccca atgactattc ggttctttat
      901 acttcaggca cattatcgta gcactctcga tttttctgac gaagcattac aagctagcga
      961 aaaaggcttg cataaactgt ttaaagctat tgaagttatt gaaaagttag caccttctga
     1021 aaagtcatcc gtcaacatca aacgatttga gactaagttg tatgatgcta tgaatgatga
     1081 ttttaacaca ccaattgttc ttgctcatct ttttgattta tcgaaaataa taaatcaggt
     1141 taacgatggc aaagaaacat tatctgtaga agatattgag ttaataaaaa gcttgttcga
     1201 catcttcatg tttaaactac ttggaatgaa aaatgagata attgaaaata acgatcagct
     1261 tattgatcaa ttgatgaata ctattctcgt tctccgtaaa gatgccaaac taaataaaga
     1321 ctgggctact gccgatcgca ttcgcgatga attaggaaag attaatataa atatcaagga
     1381 tactaaagac ggagttgaat ggagttttga ttagactctt cttactcaac ttaaattgtt
     1441 ctttgagtgg tttttagtaa atttgagaaa tatctaaaaa taacgaatcc tattaataat
     1501 aaaatatgaa aagggtaatt tacactgaca atgctcccgc accaattggt ccttacagcc
     1561 aagcagttga aaataatgga acattgttta tttcaggcca aattcctgtt aacccatcaa
     1621 acggcaaagt agttccaggt ggagtaactg aacaaactaa ccaggtatta aagaacatta
     1681 aagctattat tactgcagca ggatatggta acgacctaag caaaataata aaatgcacga
     1741 tttttttgaa tgatatgtct ctttttgcag agatgaatgc agtttatgga acatattttc
     1801 aagtggaccc tccggcaagg gcagcatttg ccgttaagga gcttccttta aacgtgttag
     1861 tggagattga agctattgct atgatataat aatatggctt attcaggata cgcaacctat
     1921 cttttttata gtaaaacatt gaatcagttg agcaattgaa aaattgttca aattatattt
     1981 aaaccattaa ataaaataat catgacaaaa agtactagat caaattggtg gttattactt
     2041 ctggctggca tcattttttt aattctggct tataaagtaa tgatacatcc agcagaatcc
     2101 attgttggac ttgcatattt tattggctgg gcagcactga tagccggaat ttttcaagtt
     2161 gggttttcag tttcatcaaa gcacattgtt cagaattggg cctggcgaat gttcagcggg
     2221 ataattaata ttgttatcgg gataatattc ttatcacatc cagctgtaac agctcagatc
     2281 ctacctttct tttttggatt gtggatgatt tttgttggaa tctctgtatt ctttaatagc
     2341 tttagggaac aaaatcttaa catatctgga ggttggttcg atatgctatt gggaataatc
     2401 ctctttattg gaggattatg gattagtttc catcctgctg aggaagcagc aatggttgtt
     2461 tggttgataa ccctaacact actattttat ggtatttatt ttattgtaat tgcactacaa
     2521 ttttcgaaga ggaagtagca agagttaatt actgcttaat gataaccagt tttttataat
     2581 ttctaaccca taatctgtca taattgattc tgggtgaaat tgtaaaccaa caaggttgta
     2641 ttttctatgt ctgattgcca tatttagatt atcctcatct tttagtataa tctctatttc
     2701 atctgggata gtttgttcat caatgttcca tgaatgatag tgccctatat taaaggtaat
     2761 tggtaatcca ttgaaaattt tatcatttat tagtattgtg gctttgttct ttataccatg
     2821 gaatggttta ttcattggaa ttagttttgc accgaaagtt tctgcgattg cctcatggcc
     2881 aaggcaaatt cctagtattg gtctggtttt atagaaccgg tttaaaaacc acattaattg
     2941 tccggcttct cgtgcgatac ctggccctgg agaaatcaat actctattaa aatcatttgg
     3001 gttaatcttg tcaagctcat cattcttcac aattatataa tcagtaacac ctgcctgctc
     3061 aaccaattga accaggttat aggtaaacga atcgtaatta tcaatgatta atagtctcaa
     3121 aacctttgtt tgcaaaagta actcattatt tattttagaa acaattatga agttactgaa
     3181 taatattatc aaagttcaaa cagatgcttt tgctatttgg gtaattttac agaaaattat
     3241 tttaagcttt tgaagaatgt tataaataga attaatcaac ttggtaaaga tagagtccca
     3301 tttctcttta ttatagattt tgatttggag aatcctgtta ttctaccttt aactgaagtt
     3361 gatcccaata atattctatt ctcaatttca ggaattaaca atgtgcctga aataccatca
     3421 caaatcacaa atgaattaga gttaaagatt tatcctgttc aaaaagaacg ttatatcaaa
     3481 gcatttaatc atgtgcaaaa tcacataagt catggtgatt ctttcttact gaaccttact
     3541 ttgcctagtc taattgaaac taatttgagc ttaaaagaaa tatttcttcg tagtgatgca
     3601 aagtacaaat tgtggttaag gaacaaattt gtggtgttct caccagaaat atttgtacag
     3661 accagagaaa gaaaaatcac ttctttccct atgaaaggga caattgatgc ttcattacct
     3721 gatgctaaaa acaagcttct aaacagtaaa aaagaacttg cagaacatta tacaatagta
     3781 gatttaatac gcaacgacct aagcatggtt gcaaagaatg tgaaagtaga gaaattcaga
     3841 tatattgatc acgtaaaaac aaatcgtgga ggtttgctac aaatgagttc tgaaattagc
     3901 ggtgaattgc ctgcaaatta taacgagtgt attggaaaca ttttatttaa aatattacct
     3961 gcaggttcaa tttccggtgc tcccaaaagg aaaacccttg aagtaataga agaagctgaa
     4021 caatataaac gtggctttta tacaggcata gttggcattt ttgatggtta taacattgat
     4081 agcggggtta tgatacgata tattgagcaa actcccgaag gtatgatct
//
LOCUS       DASCQP010000226         4524 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000849296, whole genome shotgun sequence.
ACCESSION   DASCQP010000226 DASCQP010000000
VERSION     DASCQP010000226.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4524)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4524)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4524
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000849296"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(42..1019)
                     /locus_tag="QF480_03790"
     CDS             complement(42..1019)
                     /locus_tag="QF480_03790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013613379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004476 - mannose-6-phosphate isomerase
                     activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I phosphomannose isomerase catalytic
                     subunit"
                     /protein_id="HJN05714.1"
                     /translation="MNSLYPLKFKPIFKDKIWGGQKIKNELGLDYGELPNCGEVWVIS
                     GVKDNQSVVENGFLKDNELNELVEVYMGDLVGEKVFDKFGDEFPLLIKFIDANDWLSV
                     QVHPDDRLAAKRKIGQGKTEMWFTLGADDNTQLISGFNREMDKETYLKHLNNGTLKEI
                     LNYENVKKGDAFFMPAGRVHALGPGILLAEIQQTSDITYRIFDWDRVDDKGDSRQLHT
                     EEALDAINFKKYDSYRTQYKSEVNKTNEVVKCDKFTTNIVDFNKTIYKDLEALDSFVI
                     YIGIEGNTILVWDEGEIKIDVGEAVIVPALISQIELVPKTTSKLLEVHL"
     gene            1091..2446
                     /locus_tag="QF480_03795"
     CDS             1091..2446
                     /locus_tag="QF480_03795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005856826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HJN05715.1"
                     /translation="MKENRRNFIKTAAIAGAGLTVLPHVAFGKKRSDTKVRLGFIGLG
                     LRGSVHLANALKRNDIEVTALCDIDPVRINIAQDELRNSSYPKAKVFDNGDYDYRNLL
                     DKKDVDAVIISTPWLWHAPMTVDAMKAGKYAGTETSGVTSLEECWDIVNTHEETGTHM
                     MILENVNYRRDVMAVLNMVRQNVFGELIHFRCGYQHDLRAVKFNNGLQPYGGGVLFGE
                     KAASEAKWRTLHSLKRNADLYPSHGIGPVAAYDNINRGNRFVSLTSHATKSRGLHDYI
                     VKEGGPDNPNAKLRWKLGDIVTTTIDTANGETIIVTHDTNLPRPYSLGFRVQGTKGLW
                     EVDGNRIYIEEISDPHRWDDATEWLQKYDHPLWKKYEDRAVGAGHGGMDFFVLNAFIE
                     SVKNNVAPPLDAYDAATWSAITPLSEVSITNNGEVQDFPDFTRAQWIKRKPYDWMKDT
                     Y"
     gene            complement(2440..3366)
                     /locus_tag="QF480_03800"
     CDS             complement(2440..3366)
                     /locus_tag="QF480_03800"
                     /inference="COORDINATES: protein motif:HMM:NF024109.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HJN05716.1"
                     /translation="MNNISRLLFFLIITQLLLISCNKKDDNTVVSPQISEVQYIVIGD
                     VNMAYRTVGVGYPLLLCMGFTGVMDIWPEVVLYELANHYKVIIFENRGMGYSTIINDT
                     TAFSMKLFAQDAANLMNALDISIAHVMAWSMGTYIAQELALNYPEKVNKVILYAADCG
                     DDITIQPDSAVMAILSDPNASDTVILSVLFPENWLERPDALAYFPQDFPEADSNIVKR
                     QDIACRNWFTEGGGTTDRLGSFNKQTLLITGDQDICTPWKNTLIMKPLIENSEILILP
                     GGGHGLMYQYPYDFSNHVLTFLKEDKGKPLNQ"
     gene            complement(3467..>4524)
                     /locus_tag="QF480_03805"
     CDS             complement(3467..>4524)
                     /locus_tag="QF480_03805"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN05717.1"
                     /translation="ESNIYITSVYYNNYTSYYGDTAVDNFGGYSGTFISPADYDYKEN
                     ILYSNAVDFFGGNSNRLLKASNIPYNVVTQMVQLGTGTFVPFSHVTYSRFSPIGTSTL
                     FVGTQSGRLYKVTNAESEPETIEIGSTQFPTANLSCVAIGESEDNLLVTFSNYGVSSV
                     WLTKDGGATWEEKESNLPDMPIRWALFHPDNNGQAILATEIGVWWTNTLNEDDTEWAP
                     SVDGMANVRIDMLKLRNGDDIVLAATHGRGLFTAEYLEDIYVGIVDNQFTESTFNIYP
                     NPAVDNITISADLKIEGPLSLTITDLSGRIIYTDQIECHSENINYSIKLPEMSSGTYL
                     VNLAFDGISESKKLIVK"
BASE COUNT         1426 a          857 c          810 g         1431 t
ORIGIN      
        1 cagtaaaaac ctggaataaa ttgataaata gggagttgga tctataagtg aacctccagg
       61 agttttgacg ttgtttttgg cacaagttca atctggctta ttaatgcagg cacaattact
      121 gcttcaccaa catcaatctt aatttctcct tcatcccaaa caaggattgt atttccttca
      181 atcccaatgt aaattacaaa tgagtccaga gcctccaagt ctttatagat ggttttatta
      241 aaatccacaa tgtttgtggt aaacttatca cattttacta cttcatttgt tttatttact
      301 tcagacttat actgagtacg atatgagtca tactttttaa agttgattgc atcaagtgct
      361 tcttcagtat gtagttgccg agaatctcct ttatcgtcaa ctctgtccca atcaaaaatt
      421 ctataagtaa tatcagaagt ttgttgaatt tcagctaata gtatcccagg accaagagca
      481 tgtactcttc cggcaggcat aaaaaaggca tctccctttt ttacgttttc ataattaagg
      541 atttctttaa gagtaccatt attgagatgc ttcagataag tttctttatc catttcccga
      601 ttaaaaccgc ttatcaactg tgtattatca tctgccccaa gcgtaaacca catttcggtt
      661 ttcccctggc ctattttcct tttagcggct agtctatcat caggatgaac ctgtaccgaa
      721 agccagtcgt tcgcatcaat aaattttata agtaatggaa attcatcacc aaatttatca
      781 aaaacttttt ctccaacaag atcgcccata taaacttcca caagttcgtt tagctcatta
      841 tctttaagga agccattttc tacaactgac tggttatcct taactcctga aatcacccag
      901 acttcaccac agtttggaag ttcaccgtaa tccaatccta actcgttttt aatcttctgc
      961 ccaccccaaa ttttatcttt aaagatcggt ttaaatttta atggatacag cgaattcata
     1021 attgatctga ttttattcaa tacagcaaaa ttagctattt ttggtacggc aaccttaaag
     1081 cagattatta atgaaagaaa acagaagaaa ttttattaaa actgcagcta ttgcaggagc
     1141 aggattaaca gttctgccac atgtcgcatt tggaaaaaag cgttcagata caaaagttag
     1201 acttggtttt attggtcttg gtttacgagg ttcggtacat ttagccaatg cgcttaaaag
     1261 gaatgatatt gaagttacag ctttgtgcga tattgatcca gtacgaataa acattgctca
     1321 ggatgagctt cgaaattcta gttatccaaa agctaaagtt tttgataatg gggattatga
     1381 ctatcgtaac cttcttgata aaaaagatgt tgacgcagtt attatttcaa cgccttggtt
     1441 atggcatgca cctatgaccg ttgatgccat gaaggcagga aaatatgctg gcacagagac
     1501 tagtggtgtt acatctctcg aagagtgctg ggatattgtt aatacgcacg aagaaaccgg
     1561 aactcatatg atgatcctgg aaaatgttaa ttatcgcaga gatgttatgg ctgtattaaa
     1621 tatggtacgc caaaatgtgt ttggagaact tatccatttt cgctgtggtt atcagcatga
     1681 cttacgcgca gttaaattta ataacggctt gcaaccttac ggtggaggcg tgttgtttgg
     1741 agaaaaggcg gcctcggaag ctaaatggcg taccttgcat agtcttaagc gtaatgccga
     1801 tttgtatccc tcacatggaa ttggaccagt tgctgcttat gataatataa atagaggaaa
     1861 ccgatttgta tcacttactt ctcatgccac aaaatcgaga ggtctacatg attatattgt
     1921 taaagaaggt ggccctgata atccaaatgc aaaattgcga tggaagttgg gagacattgt
     1981 tacaactaca attgatacag ctaatggcga aacaattatt gtaacgcatg atactaattt
     2041 gccacgtcca tattctcttg gtttcagggt gcagggtacc aaaggtctgt gggaagttga
     2101 cggaaacaga atctatattg aagaaatatc agatccgcat agatgggatg atgctactga
     2161 atggttacaa aaatatgacc atccattgtg gaaaaaatat gaagacaggg cagtaggagc
     2221 aggacatggt ggcatggatt ttttcgtgct taatgctttt attgaaagtg tgaagaataa
     2281 tgtggctcct ccacttgatg cttacgatgc tgcgacatgg agtgcaatta ctccactatc
     2341 agaagtgtca atcacaaata atggtgaggt tcaggatttc ccagatttta ctcgtgccca
     2401 atggataaaa agaaagccat atgattggat gaaagatact tattgattta atggcttccc
     2461 cttgtcttct ttgagaaaag tcagtacatg attggaaaaa tcataaggat attgatacat
     2521 taatccatgt ccacctcccg gaaggatgag tatttctgag ttctctataa gaggtttcat
     2581 tattagtgta tttttccatg gtgtgcaaat atcctgatct cccgtaatca acaatgtctg
     2641 tttattaaaa ctgccaagtc tgtcagttgt gccaccacct tctgtgaacc aattcctaca
     2701 ggcaatgtct tgccgtttta ctatattgct atctgcctct gggaaatctt gcggaaaata
     2761 tgctagtgca tcaggtcgtt ccagccagtt ttcaggaaat aatactgaca aaataactgt
     2821 gtctgatgca ttggggtctg atagtatagc cattacagca gaatcaggct gtattgtgat
     2881 atcatcacca caatcagctg cataaaggat tactttattt accttttcgg gataattcaa
     2941 tgcaagctct tgggcaatat acgtccccat agaccaagcc attacatgag ctattgaaat
     3001 atccaaagca ttcataaggt ttgcggcatc ctgtgcaaaa agcttcatgc taaaagcagt
     3061 tgtgtcattt attattgttg aatatcccat cccacggttt tcgaaaataa tcactttgta
     3121 atggttagcc aattcgtata atactacctc cggccatatg tccataactc cggtaaaccc
     3181 catacaaagt aataatgggt atcctactcc aacagtacgg tatgccatat ttacatcgcc
     3241 gataactata tattgaactt cactaatttg tggagatact accgtattat catccttctt
     3301 attgcaagat ataagtagca attgagtgat aataagaaag aataggagcc ttgaaatatt
     3361 attcatgagt cagggttata aatcaagaaa tgaatttcat gacaaatgta taaaacaaat
     3421 caattgaaac ccagaaagat actatcaaaa gtaaacctta gtgaagttat ttaacaatca
     3481 actttttact ttcacttatt ccatcgaaag caaggttaac caaataggtt ccgcttgaca
     3541 tttctggaag tttaatgctg tagttaatat tttcagaatg gcactcaatt tgatcagtat
     3601 aaataatcct gccactaagg tcagtaattg ttaatgataa aggaccttca atttttaaat
     3661 ctgccgaaat tgtaatatta tcaactgcag gatttgggta aatattaaat gtactttctg
     3721 taaactgatt atccacaatc ccaacataaa tatcttccaa atattcggca gtaaataagc
     3781 cacggccatg tgttgctgct agtacaatat catctccatt acgaagtttc agcatatcaa
     3841 tacgaacgtt tgccattcca tctacagatg gagcccactc agtatcgtct tcattaagtg
     3901 tgttcgtcca ccaaacccca atttctgtag ccaatattgc ttgcccgttg ttatcaggat
     3961 gaaataaagc ccaacgaatt ggcatatcag gcaggtttga ttctttttcc tcccaggttg
     4021 cgccaccatc ttttgttaac caaacagaag aaacaccata attagagaat gtaactaaaa
     4081 gattatcttc actttcccca atagcaacac atgaaaggtt tgctgttgga aattgcgtac
     4141 ttccaatttc gattgtttca ggttcacttt ctgcatttgt cactttgtat aaccttccag
     4201 attgtgttcc tacaaataat gtagaagttc caatcggtga aaagcgtgaa taagtaacat
     4261 gagaaaaagg cacaaatgta cctgttccaa gctgaaccat ttgagtaact acattataag
     4321 gaatattgct tgccttcaaa agtctattgc tgtttccacc aaaaaaatca actgcatttg
     4381 aataaagaat gttttcttta taatcgtaat ctgcagggct aataaatgtt cctgaatatc
     4441 caccaaaatt atctacggca gtatcaccgt aatatgatgt gtagttatta taataaacag
     4501 acgtaatata tatatttgat tcat
//
LOCUS       DASCQP010000227         2218 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000849812, whole genome shotgun sequence.
ACCESSION   DASCQP010000227 DASCQP010000000
VERSION     DASCQP010000227.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2218)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2218)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2218
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000849812"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            199..633
                     /locus_tag="QF480_03810"
     CDS             199..633
                     /locus_tag="QF480_03810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05718.1"
                     /translation="MFSRVPILIFFVLANIILLSNITIPHHHHNSKVCIVDSHCQTNS
                     ETHKHESDGHHHDHDGDNNSEYCVFDQIYLIPYNQLTQDRKDLVSIYLQSQPEGFQTV
                     SFDQELSVKFPISRFVTQRHLLSFCYTSAASTNIGLRAPLVA"
     gene            746..931
                     /locus_tag="QF480_03815"
     CDS             746..931
                     /locus_tag="QF480_03815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05719.1"
                     /translation="MNYKILLFVLLALVFKGCNNLNKQEQQTEHEEPVIQITAYNGDF
                     ELFAETIHAILQLYAHY"
BASE COUNT          754 a          345 c          351 g          768 t
ORIGIN      
        1 tcacaggccc atcacatgag ataagtataa tctttgagtt tgatgagatc ggactcatcg
       61 gtaagagcag caagggtagt aattttatgg cccctacaag aaaacgtaca aacagcccta
      121 ttgagtgttc gccgttttag ggaagagagt ttttaagaag aaataattta tcattatctt
      181 tgcataaatt tattataaat gttcagtaga gttccaatat taatattttt cgtgcttgct
      241 aatattattt tgctctctaa tattactatt cctcaccatc atcataacag taaagtctgt
      301 attgtagatt ctcattgtca aacaaatagc gaaacacata agcatgaatc tgatggacac
      361 catcatgatc acgatggtga taataactct gaatattgtg tttttgacca gatttatcta
      421 attccttata atcagctaac acaggatcgc aaagacctag taagtattta tcttcaatca
      481 cagcctgaag gatttcaaac tgtttcattt gatcaggaat tatctgttaa atttcctata
      541 tcaagatttg ttactcaacg tcatttatta tctttttgtt ataccagtgc tgcatccact
      601 aatattggat tacgggctcc cctagttgct taaattttaa agtttacata taattttatg
      661 aatgtatgtg ataatcagct tatcaccgat ccttaattta cattcatata tccaatgttt
      721 tttattgaat ttaaacaata cctaaatgaa ttataaaata ttattattcg tattacttgc
      781 tttggtcttt aaaggttgta acaatttaaa caaacaggag caacaaactg agcacgaaga
      841 acccgtaatt caaatcacag catataatgg tgattttgaa ctttttgctg aaactataca
      901 tgccatttta caactttatg cacattactg aataaatcct tgtctgagag tagatctctc
      961 tctaatgata aaggggtaag taaataagag aagtattagc atccttattt ctccctcaca
     1021 aaagtaatat ctcagaaaga ttaataaagg gtataataaa ccctgatcca tcgcacaagc
     1081 taacctaata tcagtgccct tgacaaatcg ttctgagaat tattaaagta tgttacgaga
     1141 attaaagata gagaaccaga ataactagta tcattacctt atacgaatta tactaacaat
     1201 acatatcaat catgtgcagt tgattttatt ttaagaagtt gatgagctat ttggaagcat
     1261 tagttttttt taatccggaa cttagacgaa ttagcaaaat gtgttttgtc gccaaaagaa
     1321 ttactaatca atgataatta tccctccaaa tcaagaataa aacaataaat atgctaccac
     1381 aatgtcacca gcaactattg atccgattgt actataaact aagggaagta agtatgttcg
     1441 tgtacccttt gcaaggtaac cctcaagaag tgatatgtgt actagttgtt tattactcct
     1501 ataagatgta gatagtaggg gtatttgatg taatgttggg cttgagtttg ctgtatataa
     1561 gatactaata atagggaact ggttaaatgg ttaatttaac aaaccaatta aagtggaaat
     1621 tcacattgta gtgtacctcc ataaatggat atctatccct ttacacttgt taatgtatat
     1681 tgaagcagat aagaggccta tttgatgtaa tgttggtaag gttttctctc ttatataggt
     1741 tactaataat acccatgagg tgatagtaat gttttctttg atggatatga caaccttttt
     1801 ttaatcaatt attcaagacc agtataagaa tataatattg aaatattatc tcaacatcat
     1861 cagttgcatt tataaaggaa ctgctccagt atcttggata ccttgtccag tgatcgtaaa
     1921 ataacgttat agaagtattg tcagtgtgta attataacct ttttagataa tcgttgttgt
     1981 gtcgtttaaa ttatagacaa caattagtgc tgcaattatt ctggcaatat tatgtttgaa
     2041 ttatgtgcgt cctaaatgct aatattgtga tgttggcaca tggtaatatt tggtgagaat
     2101 atgcctttct aaacaaatct catcttctat ataagcaaca atattatgcg taacaaatat
     2161 gtaacccttg tactccttta aattatgcac aaaggataat atcttgtaat aggttgaa
//
LOCUS       DASCQP010000228         3944 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000851387, whole genome shotgun sequence.
ACCESSION   DASCQP010000228 DASCQP010000000
VERSION     DASCQP010000228.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3944)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3944)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3944
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000851387"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..605
                     /locus_tag="QF480_03820"
     CDS             <1..605
                     /locus_tag="QF480_03820"
                     /inference="COORDINATES: protein motif:HMM:NF040439.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="GWxTD domain-containing protein"
                     /protein_id="HJN05720.1"
                     /translation="LVLNTQNTFVEKINSRDTLETYIKYLIPISTDIERKYSENQLKT
                     ADIEELRKYFLSFWMERDKLNPEMAWNDYLLRVKQANKNFKSVSLEGYQTDRGRVYLQ
                     YGQPNIISEQYFEPAAYPYEIWHYYQLDKQHDKKFVFYSHDIVTNDFQLIHSNAVGEL
                     NNYRWETIIYKRTWDPHSIDDAIIPSAWGSKATQTYKQPW"
     gene            825..1841
                     /locus_tag="QF480_03825"
     CDS             825..1841
                     /locus_tag="QF480_03825"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006847465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HJN05721.1"
                     /translation="MQKTALVILNYNGVKFLEKFLPIVIEHSSGDAEIWVADNCSTDG
                     SIELLEEQFKDVKIIQNETNSGFATGYNVALKQIIADYYILLNSDIEVTANWIPPIIS
                     LMESDSTIGACQPKIRSYYNKGMFEYAGASGGFIDKYGYPFCRGRIFQSLEKDEGQYD
                     DSIEVFWATGACLFVRAELFHKLNGFDDDFFAHMEEIDFCWRIKSFGNKVMVCPSSMV
                     FHVGGGTLPVGSARKTYLNFRNNFVLLIKNLPSSQLFSVLTTRLFLDFFAGMKFLGQG
                     GFSDFIAVIRAHNYVYRNLQLIRRKRKATVRSLVSKIYQGNIAIDHYMFGKRKYSDLK
                     KPLS"
     gene            complement(1842..2258)
                     /gene="aroQ"
                     /locus_tag="QF480_03830"
     CDS             complement(1842..2258)
                     /gene="aroQ"
                     /locus_tag="QF480_03830"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005845241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003855 - 3-dehydroquinate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II 3-dehydroquinate dehydratase"
                     /protein_id="HJN05722.1"
                     /translation="MKILILNGPNLNLTGERETNIYGTVSFENYLDELRVIYPDIKIL
                     YFQSNVEGEIINIMQDVNNAFDAIILNAGAYTHTSIAIGDAVSSLKIPVIEVHITNIF
                     SRESFRQTSYLAPYCKGVISGFGLESYTLAIEYLNN"
     gene            2651..2995
                     /locus_tag="QF480_03835"
     CDS             2651..2995
                     /locus_tag="QF480_03835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018337561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HJN05723.1"
                     /translation="MKLEKTNAQMRKGVLELCILSIISTKEVYSSNIMSSLKDAKLLV
                     VEGTIYPLLTRLKNDGLLSYRWEESASGPPRKYYSMTENGKTVLNSLKSTWEQLSESV
                     NTIITLKPDNNE"
     gene            2988..3617
                     /locus_tag="QF480_03840"
     CDS             2988..3617
                     /locus_tag="QF480_03840"
                     /inference="COORDINATES: protein motif:HMM:NF015957.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0080135 - regulation of cellular response
                     to stress [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PspC domain-containing protein"
                     /protein_id="HJN05724.1"
                     /translation="MNKIMNINIGGIIFNVDKETYDRLNSYLKEINNHFKETEGGEEI
                     INDIESRIVELFQQRLNSKKEVITIQDVEEVITIMGKPSDFEGEPQDDYNDPDVRQYS
                     KKRMFRDIDNRMLGGVCSGLGAYFRIDTVWFRIGFVVATLSGLSILAYLILWVIIPPA
                     RTVSEKLEMNGDPVTVSNIEKSIREEMDEIRSKIDDLAAQAKRKFRKKS"
     gene            complement(3646..>3944)
                     /locus_tag="QF480_03845"
     CDS             complement(3646..>3944)
                     /locus_tag="QF480_03845"
                     /inference="COORDINATES: protein motif:HMM:NF012515.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HJN05725.1"
                     /translation="NKNALVIITLGADGVIADAEGITTKLPAIETEVVSTIGAGDAFN
                     AGIIFGLEQQNFKHESFTNIQKDSVVNLLKSGLKYSAQVCNSLDNYIPKKTQHN"
BASE COUNT         1349 a          577 c          708 g         1310 t
ORIGIN      
        1 tgcttgtgtt aaatacccaa aatacttttg tagaaaagat taacagtaga gatactctag
       61 aaacctatat aaaatatttg attccaatct caacagatat tgagcgtaag tattctgaga
      121 atcaattaaa aacagctgat attgaagagc ttcgaaaata ttttttaagt ttttggatgg
      181 aacgcgacaa gctaaatcct gaaatggcct ggaatgatta tctactaaga gtgaaacagg
      241 caaataagaa tttcaaatct gtttctctcg aaggttatca aactgatagg ggtagggtat
      301 atttacagta tggacaacca aacattattt cagaacagta ttttgaacca gctgcatatc
      361 catacgagat ttggcattat taccaacttg acaaacagca tgataaaaag tttgtgtttt
      421 attctcacga tattgtgacc aacgactttc agttaattca ctcaaatgcc gttggagagc
      481 ttaataatta cagatgggag acaatcatat ataaacgaac ctgggaccca catagcatcg
      541 atgatgctat tataccctcg gcctggggta gtaaagctac acaaacatac aaacaaccct
      601 ggtaatttat ttgtaattct tcaaatcata aagatttagt gtctagctcc atgattgtct
      661 aagttttgaa tttcttttct ttactctatt catacatcta tttaccaatg tgaactttaa
      721 tttgtgattt aataatgata aattacaaaa gagttttaat ttcgtggttc ttaataaaat
      781 gacatttgtt tgataaattg aattgcacac gtatatatta aaatttgcaa aaaacagcat
      841 tagttatatt gaattataat ggggtcaagt ttttagagaa gttcctcccc atagtaattg
      901 agcatagttc aggtgatgca gaaatatggg tagctgataa ttgttctact gatggttcta
      961 ttgagttgtt ggaagaacag tttaaggatg tgaaaattat tcaaaatgaa actaatagtg
     1021 gatttgcaac tggttataat gttgcactca agcaaattat tgctgattat tacatcttac
     1081 taaattcgga tattgaagtc accgctaact ggattccacc cataatctca cttatggaat
     1141 cagacagtac aattggtgct tgtcagccaa aaatcaggtc atattataac aaaggtatgt
     1201 tcgagtatgc tggtgctagt ggtggtttta ttgataaata tggttatccc ttttgcagag
     1261 gaagaatatt tcagtcactc gaaaaagatg agggtcaata tgatgactca atagaagttt
     1321 tctgggctac tggtgcatgt ttgtttgtga gggctgagct ttttcataaa cttaacggct
     1381 ttgatgatga tttttttgcg catatggaag agatagactt ctgttggaga attaagagct
     1441 ttgggaataa agtcatggtc tgcccttctt caatggtatt tcatgtggga ggtggtactc
     1501 ttccagttgg ttcagccaga aagacttatc ttaattttag aaataacttt gtgctgctaa
     1561 ttaagaattt accatccagt caactctttt ctgttttaac taccaggtta tttcttgatt
     1621 tttttgcagg catgaagttt ttaggccaag gaggattctc tgattttatt gctgtaatta
     1681 gagcacataa ttatgtgtat agaaacttac aacttattag acgaaagcgt aaggctacag
     1741 tgagaagttt ggtaagtaaa atatatcaag gcaatattgc tattgatcat tatatgtttg
     1801 gtaagagaaa gtattccgat ttaaagaaac cgcttagctg attaattatt taaatattca
     1861 atagctagcg tatatgactc caaaccaaag cctgaaataa cacctttgca atatggtgct
     1921 aaataactcg tttgtcggaa agattccctt gaaaatatat tagtaatatg aacttctatc
     1981 actggaattt ttaggctgct aacagcatcg ccaatagcta tagaagtatg tgtatatgca
     2041 cctgcgttta atataatcgc atcaaacgca ttgttaacat cctgcattat attaattatc
     2101 tctccttcaa catttgattg aaaatataaa atcttaatat caggatatat cactctaagt
     2161 tcatcaagat aattttcaaa tgaaacagta ccgtaaatat ttgtttctct ttctccggtt
     2221 agattaagat tgggtccgtt taaaattaat attttcattt ctcgagttaa tttattgcaa
     2281 agatagtaat tgtctgtttt ttaactgagc caaatctgtt agacatacat aataaatttt
     2341 ctcaatagca atttaagcac atttaatttg atattattat aactaattta ttacattagt
     2401 tttcctatat ttcagttaga atgcatatag atttacaaca taacataaaa actattaacc
     2461 agaaacatca gaaaaacagt gtgttataaa ataatattaa aagatatagg actatgtatt
     2521 gcatagtact ataaattgta ctatgtttgc agcatgaaac gtctattgta agatcatcat
     2581 aattttagaa cgtaatgatt attttactat agaaagttcc atatgtcgtc taaaaaataa
     2641 ataataacat atgaaactag agaaaacaaa tgcccaaatg cgaaaaggag tgttggaatt
     2701 atgtatactg tctataattt cgactaaaga agtttattct tcaaatataa tgtcttcatt
     2761 aaaagatgca aaattactag tggtagaagg cactatttat cctttgctaa cgaggcttaa
     2821 aaatgatggg ttacttagtt atcgctggga agagtcagca tccggaccac ctaggaaata
     2881 ctatagtatg acggaaaatg gcaaaacagt acttaactca ttgaaaagta catgggagca
     2941 gttatccgaa tctgtaaata cgataataac tttaaaacct gataacaatg aataagataa
     3001 tgaacataaa tatcggaggg ataatattta atgtggacaa ggaaacttat gacagattaa
     3061 atagttatct taaagaaatt aataaccact ttaaggaaac agaaggggga gaagagataa
     3121 tcaacgatat tgagtcacga attgttgaat tatttcaaca gagactgaat agtaaaaagg
     3181 aggtgatcac tatacaggat gttgaggagg ttatcacaat aatgggtaaa ccatctgatt
     3241 ttgaaggtga gccccaagat gactataatg atcctgatgt tagacaatat tctaaaaagc
     3301 gaatgttcag agatatagat aacagaatgc taggtggagt ttgttctggg cttggtgcat
     3361 acttcagaat tgatactgta tggttccgaa ttggttttgt tgtagcaact ctttctggat
     3421 taagtatact ggcatatttg attttgtggg tgattattcc tccagctaga actgtaagtg
     3481 aaaagctcga aatgaatggt gacccggtaa ctgtttcaaa tattgaaaag tcaattcgtg
     3541 aggagatgga tgaaatacgt agtaagatag atgacctcgc agcacaggct aagagaaaat
     3601 ttagaaagaa atcttaatat tattatccaa acaattgtta agagtctaat tgtgttgggt
     3661 tttcttggga atataattat ctagtgaatt acacacctgt gcagaatatt ttaatccact
     3721 tttcaacaaa tttactacgc tatccttctg tatattagtg aagctttcgt gcttaaaatt
     3781 ttgttgttca aggccaaaaa ttattccagc attaaatgca tctccagcgc caattgtact
     3841 tactacttcg gtttctatgg ccggtagttt agttgtaatt ccttcagcat cagcaattac
     3901 accatcagcc ccaagcgtaa ttattactag tgcatttttg ttta
//
LOCUS       DASCQP010000229         2810 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000853087, whole genome shotgun sequence.
ACCESSION   DASCQP010000229 DASCQP010000000
VERSION     DASCQP010000229.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2810)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2810)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2810
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000853087"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            311..1930
                     /locus_tag="QF480_03850"
     CDS             311..1930
                     /locus_tag="QF480_03850"
                     /inference="COORDINATES: protein motif:HMM:TIGR04456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LruC domain-containing protein"
                     /protein_id="HJN05726.1"
                     /translation="MRKFIYLLGVMLIISIGFTGCSKKEDQNDDDPAKGMNDLIISDN
                     FDWRTTKTVDVSITLPTDDFSQIVNIYSISGEELYYTGYATNNDILSTKITIPTSVTE
                     VMLIYGFDQAAEPKLVDVGGNLVYNFNSSKSIVNGKSADDCGCNGGLFSLTMRYTGSS
                     SAQIKVKEKKCSVVIYCGTVGPDAEFTITGGSKKNGRFDNTIYFYVDGVKNSTMHTSC
                     SVPLEAGDVYDDFTIISGISKNNLPLCGSPPPDPPPPPPPVDPPVTTTVNFDGCLAYE
                     DLWPGKGDYDFNDLIIDYDFAVTKDDDDYIQNVTGVFTVYAYGASFHNGFGFTLPNVD
                     PDQLISVSGYEIQSGSIFTLASNGLEDNQSAATVIVYDDSYNILTHPGVGIGVNTEES
                     APYVAIDSVVLQMVFFDNGSFASGGPVSYDDLDIGNFNPFIIVRQDRDVEVHLLDFTP
                     SDLADQTIYGTFDDDSDASQQRYYTTSNNLPWAINLPVLFEYPQEKKEITTAYLKFAD
                     WAESGGTLFTDWYEDLSGYRNDSKIYSPPSK"
     gene            complement(2057..>2810)
                     /locus_tag="QF480_03855"
     CDS             complement(2057..>2810)
                     /locus_tag="QF480_03855"
                     /EC_number="1.4.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018695125.1"
                     /note="converts 2-oxoglutarate to glutamate; in
                     Escherichia coli this enzyme plays a role in glutamate
                     synthesis when the cell is under energy restriction; uses
                     NADPH; forms a homohexamer; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glutamate dehydrogenase"
                     /protein_id="HJN05727.1"
                     /translation="GIEWGGSLIRLEATGYGTVYFAEEMLKTRGDSMKGKVCTVSGSG
                     NVAQYATEKATEFGAKVVTLSDSSGYIYDPEGIDAEKLAFIMDLKNVRRGRIKEYADK
                     YGCEFFPGQRPWGVKCDVAMPCATQNEVSEEEAKALIANGCFVVSEGANMPSVPEAVT
                     VYQEAKILYGLGKAANAGGVAVSGLEMSQNSMRFSWTREEVDAKLHQIMKDIHATCVE
                     WGKEGDYIDYVKGANIGGFVKVADSMMAQGVV"
BASE COUNT          876 a          481 c          512 g          941 t
ORIGIN      
        1 acaaatatag ggttaattaa ttattaattt ttttgtgaag taattaatat caaattgtca
       61 atagatttat ttagattgac gatttctagg gtgagaatgt gctatatttg gcattatgcg
      121 gaaatttaat tgagagtctt tagcattgaa tttcccaaca tgggaagata ttattattat
      181 tagaatattc taatcctaac acttagaagg atggaggtaa gttaaatacc tgaaaaacaa
      241 ctttgtataa actatttatg ttgtacggca tattaattga tcttgaatct tgaatctaaa
      301 ccataatgtt atgagaaaat ttatttattt actcggcgta atgctaataa ttagtattgg
      361 atttacaggt tgtagcaaaa aagaggacca aaatgatgat gatccggcta agggtatgaa
      421 tgatttgatt attagtgata attttgattg gagaacaact aaaacagttg atgtttctat
      481 aactcttcct actgatgatt tttctcaaat agtcaatatt tattcaatta gtggtgaaga
      541 gctatattat acaggttatg caacaaataa cgatatactg tcaacaaaaa ttacaatccc
      601 aacaagtgta actgaggtaa tgcttattta tgggtttgat caggctgctg agcctaaact
      661 tgttgatgtt ggaggaaatc ttgtatataa cttcaactcc agtaaatcaa tcgttaatgg
      721 aaaaagtgct gacgattgtg gttgcaatgg gggcctattt agtttaacca tgcgttatac
      781 cggaagttca tcggcccaga taaaagtaaa agagaagaaa tgtagcgtag ttatttattg
      841 tggtaccgtt ggccctgatg cggagtttac aattacaggt ggttcaaaaa agaacgggag
      901 atttgataat acaatttatt tctacgtgga tggggttaaa aattcaacta tgcatactag
      961 ttgttctgtt cctctagaag caggcgatgt ttatgatgac ttcacaataa tatcaggaat
     1021 tagtaaaaat aatctgccat tatgtggaag cccaccacca gatccaccac caccgccacc
     1081 accagtagat ccaccagtaa caacaacagt taattttgat ggttgtttgg cttatgagga
     1141 tctttggcca ggaaaaggtg attatgattt taatgactta attattgatt atgactttgc
     1201 tgttaccaaa gatgacgatg attatataca aaacgtaact ggagtattta ctgtttacgc
     1261 ttatggagca tcattccata atggatttgg atttacattg ccaaatgttg acccagatca
     1321 gttaataagt gttagtggat atgaaattca atcggggagc atttttacat tagcttccaa
     1381 tggacttgaa gataaccaat ctgcagcgac agttattgtt tatgatgatt catacaatat
     1441 tcttacacac cctggtgttg gtattggtgt taatactgaa gaatctgctc catatgttgc
     1501 gattgattcc gttgtgcttc aaatggtttt ctttgataat ggatcatttg catctggagg
     1561 tccagttagt tatgatgatc ttgatattgg taattttaat cctttcatta ttgttcgtca
     1621 agatagagat gtggaggtgc atttgcttga ttttacacca tctgatcttg ctgaccaaac
     1681 aatatatgga actttcgacg atgatagtga tgcaagtcag caaagatatt acacaacttc
     1741 aaacaattta ccctgggcta ttaatttgcc agttttgttt gaatatcctc aagagaagaa
     1801 ggaaattact actgcatatt taaaatttgc tgattgggct gaaagcggag gtactctttt
     1861 tactgattgg tatgaggatc tgagtggata tagaaatgat tcaaaaattt attcaccacc
     1921 ttctaaataa atagatttag ttaaacatta gggtaaagtc tcgtaattta cggggctttt
     1981 tttatacaat taatagataa aaaaaagccg tctgggattt cccaaacggc tttcttttat
     2041 tattgtttgg tgtttactaa acaactcctt gtgccatcat tgaatcggca acttttacaa
     2101 aaccgccaat atttgcgcct tttacataat ctatgtaatc accttcttta ccccattcaa
     2161 cacatgttgc atggatatct ttcataattt ggtgaagttt tgcatcaact tcttcacgtg
     2221 tccagctgaa acgcattgag ttttggctca tttcaaggcc tgaaacagca acaccaccag
     2281 cattggcagc tttaccaagt ccgtaaagaa ttttagcctc ctgatatact gtaacagctt
     2341 caggtaccga aggcatatta gcgccttcac ttactacgaa acatccatta gcaataagag
     2401 cttttgcttc ttcttcgcta acttcatttt gagtagcaca tggcatagca acatcacact
     2461 taactcccca tggacgctgt cctgggaaga actcacaacc atatttgtca gcgtattctt
     2521 taatacgacc acgtcttaca tttttaagat ccataatgaa tgctaatttc tcagcgtcaa
     2581 ttccttcagg gtcatatata taacctgatg aatcagaaag agtaacaact ttagctccaa
     2641 attcagtcgc tttttcagtt gcatattgtg caacattacc tgagccagaa actgtacaaa
     2701 ctttaccttt catgctatca ccacgggttt tgagcatttc ttctgcaaaa tatacggtac
     2761 cataacctgt tgcttcaaga cgaattaatg atccccccca ttctattcct
//
LOCUS       DASCQP010000230         2177 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000854218, whole genome shotgun sequence.
ACCESSION   DASCQP010000230 DASCQP010000000
VERSION     DASCQP010000230.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2177)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2177)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2177
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000854218"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..812)
                     /locus_tag="QF480_03860"
     CDS             complement(<1..812)
                     /locus_tag="QF480_03860"
                     /inference="COORDINATES: protein motif:HMM:NF015316.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein transport protein"
                     /protein_id="HJN05728.1"
                     /translation="MRKVVLLMLSSVFISMSVFAGGYQVRLQGNKQNGFGLVGTSLNW
                     GSSSIFYNPGALSFMKDKIHFAIGASGIMSNAAFQQSGSSYAAETDNPISTPFYVYGA
                     AKINELITVGVGVYTPFGSSVKWKDDWSGKLLIQNISLKAIFIQPTISFNLNEKFGVG
                     AGFSYTTGSVEINKALNYGPNSDVNLNANANGIGFNLGVFYKASDKLSIGLDYRSKIS
                     MKVDGGDATFNVPSSLNTLIPATNKFDTELPLPGNLDFGIAYWVTENLLIAF"
     gene            complement(1132..>2177)
                     /locus_tag="QF480_03865"
     CDS             complement(1132..>2177)
                     /locus_tag="QF480_03865"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN05729.1"
                     /translation="VTQAYATLNNYNTEIAGLPKFIDTGTGLPFVIESRDGTIDGGPG
                     FLRLHDPLFDFGFPKNVSMSVNMGGSLADSTWLEQDDAAMVAFHCLRDPFAPFDHGMV
                     VVPTTNENVVPVDGGNIFIRKANEFGNNDAFSGIPDGNPYTDAARATYGQTYEYIYAT
                     QPTMTVSEGAEGLYPFILPLNGGTSVFGNQASPWDWWDFATLELVVAATNALMGTNFN
                     AIDINNSGLFSNPNMSQEQGLIYIDTIMGYLNPRAVLQLDLATGIGESIEVRDAMKLY
                     PNPSSGSVVVENDKAKMSEIIFMDAIGRIVFSVEVDGYQYMLDHNGWKRGIYFVTVMF
                     KEGGQLTKKLIIK"
BASE COUNT          733 a          433 c          340 g          671 t
ORIGIN      
        1 tcaaaagcta ttagtaaatt ctcagttacc cagtatgcaa taccaaaatc aagatttcct
       61 ggaagaggaa gctctgtatc aaatttattc gtagcaggta tcaatgtatt taatgacgaa
      121 ggaacattaa aagttgcatc tcctccatca accttcatac taattttaga gcggtagtca
      181 agtcctattg aaagtttatc actggctttg tagaaaacgc caagattaaa tcctatacca
      241 ttggcattag cgttaaggtt aacatcagaa tttgggccat aatttagcgc cttgttaatt
      301 tctacactgc ctgttgtata gctaaatccg gcaccaacac caaacttctc atttaaatta
      361 aatgaaattg ttggttgaat aaaaattgcc tttaatgaaa tattctgaat taacaatttt
      421 ccagaccaat cgtctttcca ttttaccgaa ctaccaaaag gcgtgtaaac acctacacca
      481 acagttatca attcattaat tttagctgcg ccatatacat aaaaaggtgt actaattgga
      541 ttatcggttt ctgctgcata actactcccc gattgctgaa aagctgcatt cgacataata
      601 ccgctggcac ctatcgcaaa gtgtatttta tctttcataa atgataatgc acccggattg
      661 taaaaaatgg aactggagcc ccaatttaaa gaagttccaa caagtccaaa tccattttgt
      721 ttatttccct gaaggcgaac ctggtatcct ccggcaaaaa ccgacatcga aataaacact
      781 gatgacagca ttaataaaac aacttttctc attgattaat cttttaaata tgcctgcaaa
      841 ataattaaat atagattaaa aaaccaaagc ttaaaaaaac attataacta ttagctcaat
      901 agttacaaca aataataaaa atttttggaa tataataagg aagcatttac tgatttgttc
      961 aagtccttat ttactattgg atactaaaga aagttgaaaa gaatgtttga ataaaaatgt
     1021 gttgcttaac ttcataactt gtttagtccc aaatttgata atctgaagat tttagtgaaa
     1081 aaaatacctc ttgcattcaa gaggtatttt tataaatatt gagaattgat tctatttaat
     1141 aatcaatttt ttagtcaact gaccaccttc tttaaacatt actgttacaa agtagatccc
     1201 tcttttccat ccgttgtgat ctaacatgta ttgatatcca tcaacttcaa cactgaaaac
     1261 aatgcgtcca atggcatcca taaaaataat ctcactcatt ttagctttat cattttcaac
     1321 aacaacagaa ccagaagaag gattaggata taatttcatt gcatctctaa cttcaataga
     1381 ttcaccgatt cctgtagcaa gatccaattg taacactgct cgcggattta aatatcccat
     1441 aattgtatca atgtagatta atccttgttc ctggctcata tttgggttag aaaataaacc
     1501 actattattt atatcaatag cgttaaaatt tgttcccatt agagcattgg tcgcagctac
     1561 aacaagctca agcgttgcaa aatcccacca atcccatggt gatgcctggt taccaaatac
     1621 actagtacct ccgttaaggg gtaaaataaa aggatataag ccttcagcgc cttcgcttac
     1681 agtcatggta ggttgtgtag cataaatata ttcataagtt tgtccataag tagcacgggc
     1741 agcatcagta taaggattac catctggtat tccggagaat gcatcattat ttccaaattc
     1801 atttgctttg cggataaata tatttccccc atcaaccggc actacatttt cgttggtggt
     1861 gggtaccaca accattccat ggtcaaacgg tgcaaaagga tcgcggagac aatggaacgc
     1921 aaccattgca gcatcatcct gctccaacca tgtagaatct gccaatgaac cacccatatt
     1981 aaccgacata cttacatttt tagggaagcc aaaatcgaaa agcggatcgt gcaatcttag
     2041 aaatcctgga cccccatcta tggttccgtc tctggattcg ataacaaatg gtaatccggt
     2101 tccggtatca ataaatttcg gtagtccggc tatctcggtg ttgtaattat ttaaagtggc
     2161 ataagcttga gttacat
//
LOCUS       DASCQP010000231         3584 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000855212, whole genome shotgun sequence.
ACCESSION   DASCQP010000231 DASCQP010000000
VERSION     DASCQP010000231.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3584)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3584)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3584
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000855212"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..387
                     /locus_tag="QF480_03870"
     CDS             <1..387
                     /locus_tag="QF480_03870"
                     /inference="COORDINATES: protein motif:HMM:NF015291.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GH3 auxin-responsive promoter family protein"
                     /protein_id="HJN05730.1"
                     /translation="MNRAIELLQEDLDIKIKEFTIAGVRHGSLFAHRWYIGTDDHLEG
                     NRAAKIIDEHLKNLNDDYRVERMEAIKEVWVTVLPSKVFYNYMKESGKEGSANKFPRV
                     LKNSRIDEWNEYLESNNLLIKKPILI"
     gene            532..1161
                     /locus_tag="QF480_03875"
     CDS             532..1161
                     /locus_tag="QF480_03875"
                     /inference="COORDINATES: protein motif:HMM:NF013933.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family transporter"
                     /protein_id="HJN05731.1"
                     /translation="MDVFLEGTILGLSLAFLFGFGPAFFALIQTGIYRGFFPGILLAF
                     GIFLNDLVIVTASLYGATSITSGAQNYSLMGIIGGGLLIIIGIVTYLRKTDIREMEDK
                     PEIKAPHPIIYIGKGFILNAVNPFVWIFWISIIVGITARFNADTFKLILFFSGTLSIV
                     LITDIIKTFAASQFKRFITDKFLILINKIAGIAIAGFGIFILIRSIISF"
     gene            1245..2357
                     /gene="ricT"
                     /locus_tag="QF480_03880"
     CDS             1245..2357
                     /gene="ricT"
                     /locus_tag="QF480_03880"
                     /inference="COORDINATES: protein motif:HMM:NF041131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="regulatory iron-sulfur-containing complex
                     subunit RicT"
                     /protein_id="HJN05732.1"
                     /translation="MGEIKENNNQQKNIVLSRGCCTVSGTEKDDLFVNQQRCCKLSAY
                     DWLPDYNDPLSKSSYNFVEVRFKNGRKDFFTFQPEMTLKKGEVVAVEASPGHDIGIIT
                     LTGELVRIQMKRKQVDPDKKDLKRVFRHARNTDIEKWLEIIELENPTMLKSRSIALDL
                     NLEMKINDVEYQGDKTKAIFYYTANDRVDFRELIRKLADAFKVRIEMKQIGVRQEAAK
                     VGGIGPCGREQCCSSYMSNFTSVSTNSARIQQLSLNPQKLAGQCAKLKCCINYEVDDY
                     IDTLNEFPDSSIPLNTKKGKAYYIKSEVFKKTMWYAYTDDSINMMAIPIDKVKYIITQ
                     NKKGKLPSELEEFAEKNTQVDNIIDDGYSNDITSYV"
     gene            2460..2918
                     /locus_tag="QF480_03885"
     CDS             2460..2918
                     /locus_tag="QF480_03885"
                     /inference="COORDINATES: protein motif:HMM:TIGR03511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gliding motility lipoprotein GldH"
                     /protein_id="HJN05733.1"
                     /translation="MSLAILTAVLYSCTTNTVFNQNVILPSEGWYKNNAVAFNVNIND
                     TLDTYDFGLNIRNSINYRYSNLYIFLITEFPNGNISRDTIELNLANDEGKWLGKGWGD
                     IKESNIVLKSGLSFPLIGTYRFLVQHAMRVDTLVGINNIGLSINKVGTLK"
     gene            2947..>3584
                     /locus_tag="QF480_03890"
     CDS             2947..>3584
                     /locus_tag="QF480_03890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019130218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008955 - peptidoglycan
                     glycosyltransferase activity [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic peptidoglycan transglycosylase"
                     /protein_id="HJN05734.1"
                     /translation="MANQKSEKKKFFNYILKLWLLWFLSIALAVVFFYGIVGEWFGHM
                     PTFEELENPKSNLASEVYSSNGELLGTFFIENRSNISYRDISPNLINALIAIEDIRFE
                     KHSGIDEKALLRVFYGVITGNHRGGGSTLTQQLAKNLFPRGRLSTPQLVLRKFQEWIT
                     ALKLERYYSKEEIIAMYLNTVPFGHNSYGIKSASATFFDCTPDSLNLQEAAL"
BASE COUNT         1226 a          540 c          670 g         1148 t
ORIGIN      
        1 atgaatcgtg caatagagtt attgcaggaa gacttggata ttaagataaa agagttcaca
       61 attgcaggtg tccgacatgg tagcctgttt gcccataggt ggtatattgg tacagatgat
      121 catcttgaag gaaaccgcgc tgcgaaaata atagatgaac atttaaaaaa tttaaatgac
      181 gattaccgtg ttgagcgaat ggaggccata aaagaagttt gggtaacggt gctcccttca
      241 aaggtttttt ataattacat gaaggaatca gggaaggaag gtagtgctaa taagtttcct
      301 cgtgtattaa aaaactcacg gatcgatgag tggaatgagt accttgagag taataaccta
      361 ctaattaaaa aacctatatt gatataaaaa tctgatatgg ctaatcccta tcgtagattt
      421 gccgacttat ttgatattca acaatagtca taaattttta ttaataatgg cgaaatacat
      481 taaggtacaa agttttaact atttttggat cattaataaa atggcctaac gatggatgtt
      541 tttcttgagg gaacaattct gggtttatca ttagcttttc tttttggctt tggtcctgca
      601 ttttttgccc taattcaaac cggaatctat aggggatttt ttcctggaat attactagca
      661 tttggcattt ttctaaacga tctcgtaatt gtaacagcat cgctttacgg agcaacaagc
      721 ataacgagtg gcgcccaaaa ttacagctta atgggtatta ttggtggggg gcttttaatt
      781 attattggga ttgttactta cttaaggaaa accgacatca gagagatgga ggataaaccc
      841 gaaatcaagg ctccacatcc aataatatat ataggtaaag gttttatttt aaatgctgta
      901 aatccttttg tatggatatt ttggattagc attatcgtag gtataacagc acgtttcaac
      961 gccgatactt ttaaacttat tttgtttttt tcaggaacat tatcaattgt tttgattacg
     1021 gatataatta aaacttttgc cgcttctcag tttaagaggt ttataacaga taaattcctc
     1081 atactgataa ataaaattgc cggaatcgcc attgcaggat ttggcatttt catcttaatc
     1141 aggtcaataa tctcatttta gagaatatta actgtttact gaataaataa acttaatgtt
     1201 tacctttgtc acgatacaat tgagatagag atcgcagaaa taatatgggt gaaataaaag
     1261 aaaataataa tcaacaaaaa aatattgttc tatcaagggg atgttgtact gtatccggca
     1321 cagagaagga tgaccttttt gttaatcagc aaagatgctg caaattaagt gcttatgatt
     1381 ggctgccgga ttataacgat cctttatcaa aatccagtta taattttgtt gaagtacggt
     1441 ttaaaaatgg acgaaaggat ttttttacct tccagccaga aatgacatta aagaaaggtg
     1501 aagttgttgc tgtcgaagca tcaccagggc atgatattgg aataattacg ctaactggtg
     1561 aattagttag aattcagatg aagcgtaaac aagtagatcc tgacaaaaaa gatctaaaac
     1621 gtgttttcag gcatgcaaga aatactgata tagaaaaatg gctggaaata attgagctcg
     1681 agaatcctac aatgctaaaa tccagatcta ttgcattaga tctcaacctt gaaatgaaaa
     1741 ttaatgatgt tgagtaccag ggcgataaaa caaaagccat tttttattat acagcaaacg
     1801 atagggttga ctttagagaa ttaataagaa aacttgcaga tgctttcaag gtacggatcg
     1861 agatgaaaca aatcggcgtt cgccaggaag cagctaaagt tggaggaatt ggaccctgtg
     1921 gacgtgagca atgttgctct tcttatatga gtaatttcac tagtgtttca actaattcag
     1981 ctcgcataca acaattatca ctaaatcctc aaaaacttgc aggccagtgt gctaagttaa
     2041 aatgctgtat aaattacgag gttgatgatt atatagatac acttaacgaa tttcctgata
     2101 gctcaatacc actcaatact aaaaagggca aagcttatta catcaaaagt gaagtattta
     2161 aaaagactat gtggtatgcc tacacagacg attctattaa tatgatggca atacccattg
     2221 ataaagttaa atatattata actcaaaata aaaaaggtaa gttaccatcg gaactggaag
     2281 aatttgccga aaaaaatacg caagtggata atataataga tgacggttat tcaaatgata
     2341 ttacaagtta tgtgtgatat tattttgact tttttttcgg agctaaataa taaatatttc
     2401 tatttcccat tcttataaca tagatgttta actttttaag aaaatcagca attacatttt
     2461 tgtctttagc catactgacg gcagttcttt actcgtgtac caccaatact gtttttaacc
     2521 aaaatgttat tcttccttcc gaaggatggt ataagaataa cgctgttgct tttaatgtta
     2581 acattaacga cactcttgat acatatgatt tcggattaaa tattcgaaat tcgattaatt
     2641 acaggtatag caacttatat atatttttaa ttacagagtt tcctaacggt aatattagtc
     2701 gcgatacaat tgaacttaat ctggcaaacg acgaaggaaa atggctaggc aaaggatggg
     2761 gagatataaa agaaagtaat attgttttaa agtctggctt atctttccca ctaataggta
     2821 cctaccgatt tctcgttcag catgctatgc gtgttgatac attagttggt attaacaata
     2881 taggattaag tataaataag gtgggaactc ttaagtaaag gtttttcgaa aaagagtatt
     2941 tgtgttatgg caaatcaaaa atcagaaaag aaaaaattct ttaactacat ccttaaacta
     3001 tggctactat ggtttttatc aatcgcattg gctgtagttt ttttctatgg tattgtaggt
     3061 gaatggtttg gtcacatgcc tacgtttgaa gaattagaaa atcccaaaag caaccttgct
     3121 tcggaagttt actcttctaa tggtgaacta ctcggaacat tttttataga gaacaggtca
     3181 aacataagtt atcgagatat ttcaccaaac ttaataaatg ccttgatcgc tatagaagat
     3241 attaggtttg agaaacactc tgggatagat gagaaagctt tacttcgggt tttttatgga
     3301 gtaattacag gaaatcatag aggtggtggc agcacactta cacaacaatt ggcaaaaaac
     3361 ctgtttccaa gaggtagact ttctactccc caacttgtgc tgcgcaaatt tcaagagtgg
     3421 attacagctc ttaaattaga aagatattat tccaaagaag agattattgc aatgtatcta
     3481 aacacagttc catttgggca taattcttat ggtataaaat ctgcttcggc aacttttttt
     3541 gattgtactc ctgattcatt aaatctacaa gaggctgctc ttat
//
LOCUS       DASCQP010000232         8829 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000858451, whole genome shotgun sequence.
ACCESSION   DASCQP010000232 DASCQP010000000
VERSION     DASCQP010000232.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 8829)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8829)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8829
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000858451"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(271..1986)
                     /locus_tag="QF480_03895"
     CDS             complement(271..1986)
                     /locus_tag="QF480_03895"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN05735.1"
                     /translation="MNLLSASFTTLMLMALLTIIPSSLVAQKQNTDKRYMHKEVINDP
                     YLPILPKDYQTSPAYSSRSSIFFTTQVNVNEDGENILFDAANEPSIAFDPTNPDRIVI
                     GWRQFDNVASNFRQAGYGYSTDAGLTWTSPEPIDAGVFRSDPVLEYDENGNFYYNSLT
                     YNQYGDFITDIYRIEDGGVVWDNGTYAFGGDKQWMQIDRTGGIGNGNIYAFWTSYYSI
                     CNPDFFTRSIDEGDTYEDCVEILGNPYWGTVTVGPDGEVYTVGTTSNISAVVIKSTSA
                     KDPDATVTWEEPTYVDLDGALTGWTNVNPAGLLGQAWIDVDRSEGPGRGNVYVLASVD
                     RYSSSDPGDVMFARSTDGGLTWEAPIRINTDSSPYNYQWFGTMSVAPNGRIDVIWLDT
                     REGNTNPYISALYYSYSDDQGDTWSANEKLSESFNPHLGWPNQNKMGDYFDMVSDNNG
                     AHLAWANTINGEQDVYYGFISQSWYVGIGDKNEDDKLFSFINYPNPFSIKTTLRYEID
                     KSSLVNITVYDIYGNKVIVVTDEMQAAGIHNIVFNANELAKGIYFCKLTAGAKSETIK
                     LTMIN"
     gene            2169..2774
                     /locus_tag="QF480_03900"
     CDS             2169..2774
                     /locus_tag="QF480_03900"
                     /inference="COORDINATES: protein motif:HMM:NF012514.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HJN05736.1"
                     /translation="MIIVYFNDIAIRITTNSIPASESMRLFNASHKEDIQGFLKKLID
                     NKITSDANIFGFEYVDLFNEISNHFRYIEAAGGVVINSEKEFLLIKRFGIWDLPKGKI
                     EKRESVKDAAIREVCEETGLSHVEIVKPLQDTFHIYKQKEKWYLKKTHWFLMRTEDTF
                     ELIPQVEEDISEALWMEKSVAQSAISKSYRSLSETLAYLFC"
     gene            complement(2794..3636)
                     /locus_tag="QF480_03905"
     CDS             complement(2794..3636)
                     /locus_tag="QF480_03905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05737.1"
                     /translation="MKYHNLVFKLFVTVAVLIGLMACNPEKKLAIEFASKAGAKNLLV
                     IAPDYLFKTNLKTYLMDSLGIGDDENKDSILLIHSEYLSDLNDSLFIVNYMLGYNKAL
                     SSFGFRVFTQDQTEEFLNLDSNSYQVNIAQIEIEETLYTYRDEVNVYEKNFYHDHNLN
                     AVYVNSWFEIYNLNDNIDNQQIYFTTDMISDIPDGSFDYDIFSGKVRYMYNIDSLKVD
                     VLYDFAYRLGKEYAGYTFDFLLNDELNKKIHPDARSTKYWRYDPINHIFFPATDDKFI
                     PLNE"
     gene            3903..4922
                     /locus_tag="QF480_03910"
     CDS             3903..4922
                     /locus_tag="QF480_03910"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012458011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004084 - branched-chain-amino-acid
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009081 - branched-chain amino acid
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid aminotransferase"
                     /protein_id="HJN05738.1"
                     /translation="MKNIDWRSLPFGYQKTDYNVRCYYKDGKWGELETTSSETINIHM
                     AATALHYGQEAFEGLKAYRGKDGKVRLFRWEENAKRMARSADGIMMAKVPEKIFKEAI
                     FKAVKLNTKYIPPYGTGATLYIRPLLFGSGPQVGVKPAEEYMFMVFVTPVGPYFKEGF
                     KPVPIEVIRDYDRAAPQGTGNIKVGGNYAASMVPAHRAHLDGFASVLFLDALEKKYLD
                     EAGPANFFGIKDGRYITPQSDSILPSITNMSLEQIAEDIGLTVERRSVPIEELATFEE
                     AGACGTAALISPISKVYDRVKDITYEYGEIAGPYSTKLYITLRAIQEAEIEDKHGWTT
                     VIDGV"
     gene            complement(4927..5757)
                     /gene="pyrF"
                     /locus_tag="QF480_03915"
     CDS             complement(4927..5757)
                     /gene="pyrF"
                     /locus_tag="QF480_03915"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007215343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004590 - orotidine-5'-phosphate
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HJN05739.1"
                     /translation="MNRKELFQLIKRKRSFLCIGLDTDINKIPKHLLSTDDPVFEFNK
                     QIVDATHSLAVAYKPNIAFYESMGSAGWDSLEKTVNYIRSVTTDIFIIADAKRGDIGN
                     TSAMYARTFFSTYNFDAVTLAPYMGLDTVTPFLEYKDCWSIILALTSNKSASDFQYIQ
                     DKNGTHLFEDVLKTAETWGSDDQIMFVVGATKAEALQEIRKIVPDNFLLVPGVGAQGG
                     SLEEVAKYGMNDHCGLLVNSSRGIIYASTEEDFAKVARKKATELQEEMELYLEDFGLL
                     "
     gene            complement(5759..6826)
                     /gene="prfA"
                     /locus_tag="QF480_03920"
     CDS             complement(5759..6826)
                     /gene="prfA"
                     /locus_tag="QF480_03920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019245279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016149 - translation release factor
                     activity, codon specific [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HJN05740.1"
                     /translation="MIDKLEVIKNRWEEIADQMNDPEVITDMKRYVKLNKDYKDLEPL
                     ITAYKEYKSLIANLVSAKEVLATEDDAEFKEMAKEEIDQLTPEKETLEEKIRMLLIPK
                     DPQDTKNAIMEIRAGTGGDEASIFAGDLYRMYQKFCESKNWKTEITKVNEGTAGGYKE
                     IVFTITGNGAYGILKFESGVHRVQRVPKTETQGRVHTSAASVVVLPEAEDFDVELLDS
                     DIRKDTYCSSGPGGQSVNTTYSAIRLTHIPTGIVVTCQDEKSQLKNLAKAMKELRNRI
                     YDLEYTKYLEEMSGKRKTMVSTGDRSAKIRTYNWPQGRVTDHRINLTLYNLPAIIDGD
                     IKDITEKLQMAENAEKLKEEV"
     gene            complement(6875..>8829)
                     /locus_tag="QF480_03925"
     CDS             complement(6875..>8829)
                     /locus_tag="QF480_03925"
                     /inference="COORDINATES: protein motif:HMM:NF024579.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05741.1"
                     /translation="ARDSMRDLILSLEAHKPKYYHLGFGKTISRRNLGIANERRSGDT
                     EDFNNLMSTGVILLDQNKFTEAIKSFKKAAKILPDNTAPDVQIAKSKEARINMEAKLT
                     AYSEEIELASNYIDTKEYAKTLRHLKNAQDILPDNWALANEIKTFTLLATKQNPPNQI
                     DRIENKQVITQFSETDNKSLISRKPTEILPVITKSRASMINYKPSLTLVSDNSSQNNY
                     QSEIDIMIEQNQKEIKVIEDTLKKLKEIDEKYAENIVIAQNLFNKDQFHEARISFLSA
                     SQIKPLEAKPKQFIAIIDSIFKILEVQKQIDQQFNSYIIIGDSLLKQNLYDKSITAFT
                     EAVSIKPSDTLASNKLQIAKNKKIDYDRAIQVMKDYNKVVKEADELLAEEEYLISKIT
                     YEKALKIKTDEAYPIVKINEISEIFAKIEFENNQKYNKVVTVADNFYSSSNLVEALVQ
                     YKIALDMKADESYPQDRIAEINTLIEDELKKTKDKYDLAISNADKLYAVKIYDKAIDA
                     YREALNILNKESYPKEMISKIITLMTENAIVNILNDTITINSETTRKFAFDPVSIKVR
                     RSSYIYFKATNLSGNVHKLIVSYGSDKGKNGGFVVVVAEGVEKNDYIIRVGNQYKWFA
                     DDNNWISIYPEKGDIQLSMMQISKSN"
BASE COUNT         2676 a         1579 c         1511 g         3063 t
ORIGIN      
        1 gtttaatttt atagctttaa tttccagtaa actgagggct atgtattttg ctgtttcttc
       61 tttaaatatc atgcaacaaa cgtacgaaaa gtttcgaaag ttggggtata taattgtgga
      121 aaatgggaaa tgaggagaaa catggttatt ggggtataag cgtataaagg tataagggta
      181 taaatgtctt gttctgaaat aggttgacac acaaagtaaa caaatttcag gatgaatcaa
      241 accttattac tgtatacctc tataccttcc ctagttaatc atagtcagtt taatagtttc
      301 tgattttgct ccggcagtaa gtttgcaaaa atagattcct tttgcaagtt cgttggcatt
      361 gaaaactata ttatgtattc ctgctgcttg catctcatcc gtaacaacta taaccttatt
      421 gccataaata tcgtacacag taatgttaac aaggctactt ttatcaatct catacctgag
      481 agtagttttt atactgaatg gatttggata atttataaat gagaaaagtt tatcgtcttc
      541 attcttatca ccaatgccaa cataccatga ttgactgatg aatccatagt aaacatcctg
      601 ttctccatta atagtatttg cccaggcaag atgtgcaccg ttattatcag aaaccatatc
      661 aaaataatct cccattttgt tctgattagg ccatcctaaa tgtggattaa atgattcaga
      721 tagcttttcg tttgcagacc atgtatcacc ttgatcatca gaatatgaat aatataatgc
      781 tgaaatatac ggattcgtat taccctcgcg agtatcaagc caaattacat caatacgacc
      841 attaggagct actgacattg ttccgaacca ttgataatta taagggctgg agtcagtatt
      901 tattctaata ggggcttccc aggtaagccc tccatcagtg ctacgcgcaa acattacatc
      961 tccaggatca ctactgctat agcgatcaac cgatgcaagt acataaacat tgcctcttcc
     1021 cggtccttcc gatctatcca catcaatcca agcctgccct aataatcctg cagggttaac
     1081 gttagtccat cctgttaagg ctccatcgag gtcaacatat gtaggctctt cccaggttac
     1141 tgttgcatca ggatctttgg cggaggttga ttttataaca actgcactaa tgttggacgt
     1201 agttccaact gtataaactt cgccatcagg cccaaccgtt actgttcccc aatacgggtt
     1261 acctaatatt tctacacaat cttcataagt atcaccctca tcaattgagc gtgtgaaaaa
     1321 atcaggattg catattgaat agtatgaagt ccagaaagca tatatattac cattgcctat
     1381 tcctcctgta cggtctattt gcatccattg tttgtcgcca ccaaaggcat aggttccatt
     1441 atcccaaacc acaccaccgt cttcaatcct atatatatca gtaataaaat cgccatattg
     1501 gttatatgta agactgttgt aatagaaatt tccattttca tcatattcaa gaacagggtc
     1561 agagcggaac accccagcat caattggttc aggagaagtc caagttaggc ctgcatccgt
     1621 tgaataacca taacctgctt gtctgaagtt actagctaca ttatcaaatt gacgccaacc
     1681 aattactatc ctgtcgggat ttgttgggtc gaatgctatt gatggttcgt tggctgcatc
     1741 aaagagtatg ttttcaccat cttcattaac atttacctga gtagtaaaaa aaatactgct
     1801 acgtgagcta tatgcaggag atgtttgata atccttaggt aatattggaa ggtaaggatc
     1861 attaattact tccttatgca tatacctctt atctgtattt tgcttttgag caactaacga
     1921 tgatggaata atagttaata atgccataag catcaaagtt gtgaaactag ctgataataa
     1981 attcattaat atagtgtttt gattaatctg gttgcttata ataaatttct ttttggttgt
     2041 aactacaaag aaacataaaa aagacattcg atcttacaaa atagttgtag ggataattct
     2101 atgtccttca tggaaatgta ttattaatta gatttgcttt cgaaaaagaa gatacttttc
     2161 aaccaattat gattatagtt tacttcaacg atattgcgat caggataaca actaattcta
     2221 taccggcttc agaaagtatg agactattta atgcatcgca taaagaagat atccaaggtt
     2281 ttttgaagaa attaattgat aataagataa ctagtgatgc taatattttt gggtttgagt
     2341 acgtggattt atttaatgaa atctctaacc atttcagata cattgaagct gcaggtggtg
     2401 tagttataaa tagtgaaaaa gagtttttgc ttataaagcg atttggtatc tgggatctgc
     2461 caaaaggaaa aatcgaaaag cgagaatcag taaaggatgc tgcgatccgt gaagtttgtg
     2521 aagaaacagg attaagccat gttgaaatag tgaagccctt gcaagatact ttccatattt
     2581 ataagcaaaa agaaaagtgg tatcttaaaa agacacattg gtttttaatg agaacagaag
     2641 atacttttga acttattcca caagtagaag aggatataag tgaggctttg tggatggaaa
     2701 aatcggtggc tcaaagtgct atctcaaagt cgtaccgttc actttctgaa acattggcgt
     2761 atttattttg ttaggcttta actaaattct taatcattca ttcaacggga taaacttgtc
     2821 atcagtagct gggaagaaga tgtgatttat agggtcgtag cgccaatact tggtacttct
     2881 ggcatcggga tgtatttttt tatttagctc atcattcaat aaaaaatcaa aagtataacc
     2941 agcgtattct tttcctagcc tgtatgcaaa atcataaagg acatctactt ttaacgaatc
     3001 gatattatac atatatcgta ccttaccgct aaatatatca taatcgaatg agccatcagg
     3061 gatatcagat atcatatcgg tagtgaaata aatttgttga ttatcaatgt tgtcgttgag
     3121 gttgtagatc tcgaaccatg aattaacata tacggcgtta agattatgat cgtgatagaa
     3181 gttcttttca taaacattta cttcgtcacg ataagtatac aaggtctctt cgatttcaat
     3241 ctgagcaata tttacttgat aactgttcga atctaaattt aaaaattcct ccgtttgatc
     3301 ttgtgtaaaa accctaaatc caaaactact caatgcttta ttatatccca gcatgtagtt
     3361 aacgataaac aatgagtcgt ttaaatctga taaatattcg ctatgtatca gtagtattga
     3421 gtctttattc tcatcatcac ctatgccaag cgagtccatt aaatatgttt taagatttgt
     3481 cttaaataaa taatcaggag caatgactag caaatttttt gcacctgctt ttgatgcaaa
     3541 ctcgattgct aacttcttct caggattgca tgccattaac ccaattaaaa cagctacagt
     3601 gacaaataat ttgaaaacta aattatggta tttcattatt ttcgatcaac aatttgatga
     3661 atactaattt gtaaacgaga ttattttaaa aatcatatat taacaattac tatgccgtct
     3721 attaataata caattttagt atcaggttgt aaaactatta ataaatgtta ttgcagcatg
     3781 cctcatacaa tcactaattt ttactgttta taaactgtgt aatttatggt gattgttggt
     3841 cctgttttct caattatccg taaattagca ttttaaaaaa taaaataatt atcatggata
     3901 atttgaagaa tatagattgg agaagtctcc ctttcggata tcaaaaaact gattataatg
     3961 tgcgttgcta ttataaagat ggtaagtggg gcgaattgga aactacatca tccgaaacta
     4021 taaacattca catggcggca actgctttac attatggtca agaagcattt gaaggattga
     4081 aagcttatcg cggtaaagac ggaaaggtaa gattgtttag atgggaagaa aatgcgaaac
     4141 gtatggcacg ttcagcggat ggtattatga tggcgaaggt gccggaaaag atatttaaag
     4201 aagcaatttt taaagccgtg aaacttaata cgaaatatat tcctccatat ggtacaggcg
     4261 caacacttta cattcgtcca ttattgtttg gaagtggccc tcaggttgga gtaaaaccag
     4321 cagaagaata tatgtttatg gtatttgtaa caccggttgg cccatatttt aaagaaggat
     4381 ttaaacctgt acctatcgaa gttatcagag attatgatcg cgctgcgcca caaggaaccg
     4441 gaaatattaa agtaggaggt aattatgctg ctagtatggt acccgctcac agggctcacc
     4501 ttgatggttt tgcatcggta cttttccttg atgctttaga gaagaaatat ttagatgaag
     4561 ccggcccggc taattttttc ggaattaaag atggcagata tattacacca caatcagata
     4621 gcatattgcc ctcgataact aatatgagtc tcgaacaaat tgctgaagat attggcctca
     4681 cggttgagcg ccgtagtgta ccaattgaag aactagctac attcgaagag gcaggagctt
     4741 gtggaacagc agctcttatt agtcctatct caaaggttta cgacagggta aaagatataa
     4801 cttacgaata tggtgagatt gcaggacctt attcaacaaa actttatata actttaaggg
     4861 ctattcagga agctgaaata gaagacaaac atggttggac tacagttata gatggggtgt
     4921 aggggcttat agtagaccaa aatcttcaag gtataattcc atttcttcct gaagctccgt
     4981 agcttttttt ctggctactt ttgcgaaatc ttcttcggtt gaggcgtaga ttattccacg
     5041 tgaggaatta actagtagtc cgcaatgatc attcattccg tattttgcaa cttcttctaa
     5101 gctaccaccc tgagcaccaa ccccgggcac taataaaaag ttatctggta ctattttacg
     5161 gatctcctgt aaggcttctg cttttgttgc cccaacaaca aacattatct gatcatctga
     5221 tccccaggtt tcggcagttt taagtacatc ctcaaaaaga tgtgttccat ttttatcttg
     5281 aatgtattga aaatcagaag cacttttgtt ggaagtcagt gctaggataa tagaccaaca
     5341 atctttatat tcgagaaaag gggtaacggt atctaatccc atatatggtg caagagtcac
     5401 agcatcaaaa ttatatgtgc taaaaaatgt acgggcatac attgccgaag tgttgcctat
     5461 gtcaccacgt tttgcatcag cgataataaa aatatcagta gttactgacc ttatatagtt
     5521 tacagttttc tctagactat cccatcctgc agatcccatc gattcataaa aggcaatgtt
     5581 tggcttgtaa gcaactgcta atgaatgggt ggcatcaaca atttgtttgt taaactcaaa
     5641 aacagggtca tctgtagata gcaaatgttt tggaatttta tttatatcag tatccagccc
     5701 tatacacagg aatgatcttt tccttttgat cagttgaaat agttcttttc gattcatttt
     5761 agacttcttc ttttaacttt tcagcatttt cagccatttg aagtttttcg gtaatatctt
     5821 taatatcacc atcaataatt gctggtaaat tgtaaagtgt aagattgatt cgatgatcgg
     5881 taacacgacc ttgtggccag ttatacgttc ttatttttgc agaacgatct ccggttgaca
     5941 ccatagtttt tctttttcct gacatctctt caagatactt agtatactcc agatcatata
     6001 ttctgtttct aagctctttc attgctttgg caagattttt aagctgtgat ttctcatcct
     6061 ggcacgtaac aacaattcct gttggtatat gtgttagtcg aatagctgaa taagttgtat
     6121 taacagattg accaccggga cctgatgagc aataagtatc ttttctaata tcactatcaa
     6181 gtaactcaac atcaaaatct tcagcctcgg gtagtactac tacagatgct gcagaagtat
     6241 gaactctacc ttgtgtttca gttttaggaa cacgttgtac ccgatgaact cctgattcga
     6301 atttcaatat tccatatgca ccatttcctg ttatagtaaa gacaatctct ttgtaacctc
     6361 cggcagtacc ttcatttact tttgtaattt ctgtcttcca atttttgctt tcgcagaatt
     6421 tctgatacat tcggtataga tcgccggcaa aaatactagc ctcatcaccg ccggtacccg
     6481 ccctgatctc cataattgca tttttggtat cttgaggatc tttggggatt agcaacatcc
     6541 ttattttttc ttcaagtgtt tccttttcag gtgtcagctg atcaatttct tcttttgcca
     6601 tttccttgaa ttcagcatcg tcttctgttg caagcacttc tttggcactt accagatttg
     6661 caataagtga cttatattct ttgtaagcag tgataagagg ttccagatcc ttatagtcct
     6721 tgttcaactt aacatatcgc ttcatatccg taataacttc aggatcattc atctgatcgg
     6781 ctatctcctc ccagcgattt tttataacct ctaatttatc aataatttcc acagattctc
     6841 aatttggatg caaaggtatt aaaaatggat gaggttagtt gcttttggaa atctgcatca
     6901 tgcttaattg aatatcacct ttttcgggat atatactaat ccagttgtta tcgtcagcaa
     6961 accatttata ctgatttcca actcttatta tgtaatcatt tttttcaact ccttctgcaa
     7021 caactacaac aaatcctcca tttttacctt tgtcgctacc ataactaacg attaatttat
     7081 gcacatttcc acttaaattt gtagctttaa aatagatata actagatctt cgtactttaa
     7141 tactaacagg atcaaaagca aactttctgg ttgtttcgga gtttattgta atagtgtcgt
     7201 ttagtatatt aacaatagca ttttccgtca tgagagttat tattttggaa atcatttctt
     7261 ttggataact ttctttatta agaatgttca acgcttcgcg atatgcgtca attgccttat
     7321 cgtatatttt tacagcatac aatttatcgg cattagaaat tgccagatca tatttgtctt
     7381 ttgtcttttt gagttcgtct tcaatcaggg tattaatttc agctattcta tcttgtggat
     7441 agctttcgtc tgctttcatg tcaagagcaa ttttatattg gactagtgct tctactaaat
     7501 ttgatgaact ataaaagtta tcggcaactg ttacaacctt gttgtatttt tgattattct
     7561 cgaattcgat ttttgcaaat atttcggata tttcattgat cttcactatt ggatacgctt
     7621 catcggtttt tatttttagc gctttttcgt aagtaatctt tgaaattaaa tattcttcct
     7681 cagccaataa ttcatctgct tcctttacaa ctttattgta atctttcatg acctggatag
     7741 ctcgatcata atctattttc ttattcttag caatttgaag tttattactt gctaatgtat
     7801 cactaggctt gattgagaca gcttcagtaa atgcagtaat cgacttatca tacaaatttt
     7861 gtttaagcaa tgaatcgcct ataattatat aagaattaaa ttgttggtcg atttgttttt
     7921 gaacttctag aatcttaaat atactgtcaa ttatagcaat aaactgttta ggttttgctt
     7981 caaggggttt tatttgagat gcactcaaaa atgagatccg agcttcatga aactgatctt
     8041 tgttaaaaag attttgtgca attacaatgt tctcagcata tttctcgtcg atctctttaa
     8101 gttttttgag agtatcttca atcactttta tttccttttg attctgctca atcataatat
     8161 caatttcaga ctgataatta ttttgtgaag aattatcact cactaatgtt aatgagggtt
     8221 tataatttat catacttgct cttgactttg taataacagg taagatttca gtaggctttc
     8281 tagagattaa ggatttattg tcagtttcag aaaactgcgt tataacttgc ttattttcaa
     8341 ttctgtctat ttgattcgga gggttctgtt ttgttgctaa caaggtaaaa gtctttatct
     8401 cattcgccaa agcccaatta tctggtaata tatcctgcgc gtttttaaga tgacgtaatg
     8461 tttttgcgta ttccttggta tctatataat tgctggccag ctcaatttct tcgctgtaag
     8521 cagttagttt tgcctccata tttattcttg cttctttcga ctttgcaatt tgaacatcag
     8581 gtgctgtgtt atctggaagt atttttgccg cttttttgaa actcttgatt gcctctgtaa
     8641 acttgttctg atcaagtaat ataacaccag tagacattaa gttgttaaaa tcttcagtgt
     8701 ctccacttcg cctttcattt gcaatcccaa gatttcgcct tgaaatagtc tttccaaaac
     8761 caaggtgata atattttggt ttatgagcct ccaaacttag tatcaaatct ctcatactat
     8821 ctctagctg
//
LOCUS       DASCQP010000233         2273 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000860109, whole genome shotgun sequence.
ACCESSION   DASCQP010000233 DASCQP010000000
VERSION     DASCQP010000233.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2273)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2273)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2273
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000860109"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            272..1591
                     /gene="nhaA"
                     /locus_tag="QF480_03930"
     CDS             272..1591
                     /gene="nhaA"
                     /locus_tag="QF480_03930"
                     /inference="COORDINATES: protein motif:HMM:NF018648.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015385 - sodium:proton antiporter
                     activity [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaA"
                     /protein_id="HJN05742.1"
                     /translation="MKNKPIPYFAITRFINEQTIGGIILIIATIIALYWSNSYFYESY
                     QNLWHNYKIGFVWGDMNMVGSLHHWINDGLMALFFFTVGLEIKREIMGGELNSVKKAS
                     LPIAAAVGGMIIPAVMYSIVVFNYPEYISGWGIPMATDIAFALGLMAMFGKRVNINLK
                     IFLTALAIADDLGAVLVIAFFYTDTIVYAEIISAIIFLGVLVIANFAGVRRTVFYAIV
                     GFGGVWVAFMLSGVHATIAGVLIAFTIPARTKIDEDSFMNKLSGFIAAFKKEPSTQNN
                     LLSKKQVHIISEIEKLNDQAHTPLQKLEHALHPVVIYFILPIFALSNAGVHISGSIID
                     MFLHPISLGIIAGLLLGKFIGISIFSHIVVKFKFATLPEGVTWKQIYGAAFLAGIGFT
                     MSMFISDLAFVSEEFKEIAKVGIIAASALSAIVGMLLLGMSLPKGEK"
     gene            complement(1678..>2273)
                     /locus_tag="QF480_03935"
     CDS             complement(1678..>2273)
                     /locus_tag="QF480_03935"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN05743.1"
                     /translation="STIWSLPLADKSWNVAPIDDITGDGINDVIIGTLFSNNYGYFLN
                     GVDGEDLESFNYSTPVDAINAIPDIVGDGTMEMVIGGRNGRVYCYSGGIGLGVGIDEM
                     ADLGNEQLSTNYPNPFSDQTTISFRLDQESFVTLRIYNLSGTVVSTLINNHLPSGQHS
                     TIWNGRSNFGKNLPAGFYIYEISTNKGDLRRKIAKIK"
BASE COUNT          698 a          372 c          418 g          785 t
ORIGIN      
        1 caaaacttat tgttggtggt aattatcctt ttgtaaaaga tacatgtaat gataatttat
       61 atcagctact agacggcaca ctttttcagg gagacggcca gtatccactt attgagtata
      121 atgcaatata tgatggatca ttgttgcatg tatttaacta agctttgtat atttgttcat
      181 aggagatgaa gattgtaaaa cagaagattt atgatctttc gttttggttc ataactttta
      241 gctaatccct tgcattaaaa gattctattt catgaagaat aagcctatac cttattttgc
      301 cattacccgg ttcataaatg aacaaaccat tggtggaata atattaatta ttgctactat
      361 tattgctctt tactggtcaa attcctattt ctatgaaagt taccaaaact tatggcataa
      421 ttataaaatt ggatttgttt ggggagatat gaatatggtt ggttcgttac atcattggat
      481 taatgatgga ttaatggcct tattcttttt cacagttggc cttgaaataa agcgagaaat
      541 aatgggaggt gagttgaact ccgttaaaaa agcttcacta cctatagctg cagcagtagg
      601 cgggatgata attcctgctg taatgtacag tattgttgta tttaactacc cagaatatat
      661 tagtggctgg ggaatcccaa tggccactga tatagcattt gccctagggt tgatggctat
      721 gtttggaaaa agggttaata taaatctcaa aatatttctt acagctctgg caattgctga
      781 tgatttaggt gctgttttgg tcatagcatt cttttatact gatacaatag tttatgctga
      841 gataatatca gctattattt ttctgggagt tttagtaatt gcaaactttg caggagtgcg
      901 acgaacagtt ttttatgcaa tagttggttt tggaggagta tgggtagcct ttatgctttc
      961 tggtgttcat gcaacaattg caggtgtttt aattgctttt acaattcctg ctcgaacaaa
     1021 aattgacgaa gacagtttta tgaataaact aagcggtttc attgctgcat ttaagaaaga
     1081 gccatcaaca caaaacaatc tcctttccaa aaagcaagtt catataatat cagaaattga
     1141 gaaactcaat gatcaggcac atactccact tcagaagcta gaacatgcat tacatccggt
     1201 agtaatttat tttatcctac caatttttgc gctgagtaat gctggtgtgc atattagtgg
     1261 cagtataatt gatatgtttc ttcatcctat ttcgttgggt ataatcgccg gattattatt
     1321 aggcaagttt attggtatct caatattctc acatattgtt gtgaaattca aatttgctac
     1381 tctccccgaa ggtgttacat ggaaacagat ttatggagct gcttttcttg ccggtatcgg
     1441 attcacaatg tcaatgttta tttctgattt agcatttgtt agtgaagaat ttaaagaaat
     1501 agccaaagtg gggataattg cagcatcggc gctttcagca attgtcggaa tgctattgct
     1561 tgggatgagt ttgccaaaag gggagaagta gattgttgaa ttttagttaa aaaaccttcc
     1621 acctcaataa aagatggaag gattcatatg aagtataagt tgtaaactta caatgtgtta
     1681 ttttatttta gctatctttc ttcttaaatc gcctttgtta gtgctaattt catagatata
     1741 gaatccggca ggtaaatttt ttccaaaatt acttcttcca ttccatatag ttgaatgctg
     1801 tccacttggt aagtggttgt tgatcaatgt gctaacaact gtaccgctga gattataaat
     1861 tcgtaatgta acgaaagatt cttgatcgag tctgaaagag attgttgttt gatcagaaaa
     1921 tggatttgga taatttgttg ataactgttc attccccaaa tcggccattt catcaatacc
     1981 tacaccaagt ccaatacctc cagaataaca atatactctg ccgtttcttc ctccaattac
     2041 catctccata gtaccatctc caactatatc aggaatagca ttaattgcat caacaggagt
     2101 tgaataatta aaagattcaa gatcctcacc gtcaactcca tttaagaaat aaccataatt
     2161 atttgaaaat aatgttccaa ttataacatc gttaatcccg tcaccggtta tatcatcaat
     2221 tggtgccaca ttccacgatt tatcagcaag aggtagcgac caaatagttg acg
//
LOCUS       DASCQP010000234         1956 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000861608, whole genome shotgun sequence.
ACCESSION   DASCQP010000234 DASCQP010000000
VERSION     DASCQP010000234.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1956)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1956)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1956
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000861608"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..908)
                     /locus_tag="QF480_03940"
     CDS             complement(<1..908)
                     /locus_tag="QF480_03940"
                     /inference="COORDINATES: protein motif:HMM:NF012711.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HJN05744.1"
                     /translation="MFDSYPIVQIQGIYYKVDELKLLCKEKISNSQVQNWEKEIYLFL
                     LELFSSSLTINVSTSGSSGFPKKIVLQKEHLIASAKATIKFFDLKKDDTIWLCLPVAY
                     IAGKMMIVRSIVGGLNLLYCKPSSIPLYDKNTNVDFVAMVPNQIFEMLETEVGLRQLS
                     KIKKLLIGGSELSNELEESLLERSSVNAWHSYGMTETITHIALCKLSSANKKGVFKLL
                     PEISVRLNKNEQLIINAPSVGVFNLVTNDIAKINEDGSFLIIGRSDNVIISGGVSLFP
                     EIIEQKIEKHIPSNFFIGGLPDEKLG"
     gene            complement(901..1956)
                     /locus_tag="QF480_03945"
     CDS             complement(901..1956)
                     /locus_tag="QF480_03945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018337809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate synthase"
                     /protein_id="HJN05745.1"
                     /translation="MEAFTKKHTFYFKQPGGTSRGVLKSKDSWFIFVYNIDEPQIKGI
                     GECSIIQGLSIDERPDFEQKLNQVCNDINNYKYWLDEGLVGFPSIRFGVEMAIKDLFA
                     GGTKLLFPSLFTEGKGEISINGLVWMGDFEEMRKRIIHKIESGYSCVKVKIGAINFED
                     ELRLLKLIRNDFTEKDIELRLDANGAFSYEEALDKISRLSEFAIHSIEQPIKQQQWKN
                     MADLCNKSSIPIALDEELIGVCHIEDIRQMLDVIKPHFIILKPSFLGGWKQSHIFIEE
                     AENRNIGWWVTSALESNIGLNAIAQWTYTLQNNIPQGLGTGQVFSNNIHSPLTILNSS
                     LNYNPLIGWDLTELINV"
BASE COUNT          625 a          383 c          273 g          675 t
ORIGIN      
        1 tcacctaact tttcatcagg taaacctcca ataaaaaagt tgctgggaat gtgtttttca
       61 attttttgct caataatttc gggaaacaaa ctaacgccac cactgattat tacattatct
      121 gaccttccaa ttattaaaaa tgatccatcc tcatttatct tggcaatatc attagttacc
      181 agattaaata ctccgacaga tggagcatta attataagtt gttcgttctt atttaatcta
      241 acgctaattt ctggcaatag tttaaagaca ccttttttgt tcgcacttga tagcttacaa
      301 agtgcaatat gagtaattgt ttcggtcatg ccataagaat gccaagcatt aacagaagat
      361 ctttctaata gactttcttc caattcattg gaaagttctg atcctccaat aagcagtttc
      421 ttaatttttg ataattgtct caagcctacc tcagtttcca gcatctcaaa aatttgattt
      481 ggtaccatag caacaaaatc cacatttgtg ttcttgtcat aaagaggtat agagctcggc
      541 ttgcaataaa gcaaattaag acctccaaca attgatcgaa caatcatcat ttttccggca
      601 atatatgcga caggtaaaca cagccatatg gtatcatcct tttttaaatc gaaaaactta
      661 atcgtagcct ttgcgctagc tatcaagtgc tctttttgta gaacaatttt ttttggaaaa
      721 ccagatgatc cagatgttga aacattaata gttaatgaag atgaaaatag ttctagcaga
      781 aataaataaa tctctttttc ccaattttgt acctgtgaat tactaatctt ttctttacac
      841 aataacttga gttcgtctac tttatagtaa atgccttgta tttgtactat tggataacta
      901 tcaaacattt attaattctg ttaagtccca accaattaac ggattataat ttaaacttga
      961 attaagaata gtgagtggtg aatgtatatt gttagagaaa acttgtcctg ttcctaaccc
     1021 ttgtggtatg ttattttgta aagtatatgt ccattgagca atcgcgttaa ggccgatgtt
     1081 agactctaac gctgaggtaa cccaccaacc aatatttcta ttttctgctt cttcaataaa
     1141 tatatgactt tgcttccaac cacctaaaaa actcggtttt aggattataa aatgaggttt
     1201 aattacatct aacatttgtc taatatcctc gatgtgacaa actccaatta gttcttcgtc
     1261 aagagcaatt ggaattgaag atttgttaca aaggtcagcc atgtttttcc attgttgctg
     1321 cttaataggt tgttcaattg aatgaattgc aaattcagat aacctactta tcttatctaa
     1381 agcctcctca tatgaaaatg caccattagc atctagccga agttcaatat ctttttcagt
     1441 aaaatcattc ctgattaatt ttagcaacct caattcatct tcaaaattta tcgcacctat
     1501 ctttactttt acacagctat aaccagattc aatcttgtga ataatccttt tcctcatttc
     1561 ctcaaaatct cccatccaca caagtccatt aatagaaatc tcgcctttac cctcagtaaa
     1621 taatgaagga aacaataatt tggtgccacc agcaaataaa tctttaattg ccatttcaac
     1681 accaaatctg atagaaggaa acccgaccag tccttcgtct aaccagtact tgtaattgtt
     1741 gatatcattg caaacctgat ttagtttttg ttcaaaatcg ggacgctcat caatacttaa
     1801 accttgtatt atgctacatt caccaattcc tttaatctga ggctcatcga tattataaac
     1861 gaagataaac caagagtctt ttgattttaa tactcccctg gatgtacctc ccggttgctt
     1921 aaaataaaag gtgtgctttt ttgtaaaggc ttccag
//
LOCUS       DASCQP010000235         3292 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000863090, whole genome shotgun sequence.
ACCESSION   DASCQP010000235 DASCQP010000000
VERSION     DASCQP010000235.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3292)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3292)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3292
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000863090"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1042
                     /locus_tag="QF480_03950"
     CDS             <1..1042
                     /locus_tag="QF480_03950"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015049.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MBOAT family O-acyltransferase"
                     /protein_id="HJN05746.1"
                     /translation="IDVYRRRTPVQNKYVDLALYISLFPQLIAGPIVRYNDIAEQLSV
                     RENNRANFVSGIERFVIGLAKKVLIANQFALLADTAFSMAPENLSTFIAWAGVVAYSF
                     QIYFDFSGYSDMAIGLGRMFGFKFLENFNFPYIAKSIREFWRRWHISLSNWFRDYLYI
                     PLGGNRKGNYRTYFNLLIVFFVTGIWHGASWNFVAWGMLHGLFMVIEKLGFNRLLTKL
                     WRPFQHIYTLFIVMMAWVLFRADDFTHAWGYFEAMFSYKSTNLNIDILHTFLNNEIYL
                     VLVIAILSSTRIWVIIYNNALAMVSKNNSYLNIANGVWSFIVLIFVVGVMILSTNYLV
                     VSSYNPFIYFRF"
     gene            1042..2181
                     /locus_tag="QF480_03955"
     CDS             1042..2181
                     /locus_tag="QF480_03955"
                     /inference="COORDINATES: protein motif:HMM:NF028132.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05747.1"
                     /translation="MMKGIKEIFVSVTFMVILIFPMVDSVFHFVPEKEIRENRALKLK
                     PELDWSDIDNFPEEFDKYYTDNFDFRNQFLLFNSRLKIQLFNVPPVNSKAIIGDDGWM
                     YLIKNMKDVYLGKNIADTNKLKRYSDIFNYRKKYLDSIGCAYYIVIAPVKTSVYPEYL
                     PLSQRNLPQTSLTDQLINLLDTIEELNIVDLRPIFRDSKGDIRMYHKTDTHWNAYGSY
                     VAYKAIMNVISIDFPELIPHSISKYKIDSIDVKGMNLTSILGIYHGIFENKITCEPTF
                     KKKSKEGQKRNYPVYEWFRFKSEYEQVFTTENDSLLKLMLVRDSFGKAIMPFLSEHFS
                     ESVYIFDGWHHDLNEDIVINEKPDIFVQLVLESQIPYLYKSAKKP"
     gene            2277..>3292
                     /locus_tag="QF480_03960"
     CDS             2277..>3292
                     /locus_tag="QF480_03960"
                     /inference="COORDINATES: protein motif:HMM:NF028132.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05748.1"
                     /translation="MKEILVLITFMVILVLPYTDSVFHFVPEEENTENRALKTMPEFD
                     WSFIDNFPEEFDKYYSDNFDLRNQFLSFNSKLKYQLFNKPPVEGKAFIGYDGWMYLVK
                     DEMDLYYGNTVAKSDELTNYYDIFRYRKNFLDSIGCKYYVVIAPSKASVYPEFLPLSK
                     RKSVEKTLTDQIVSLLDTVTGLTVIDLRTVLKKAKSRDIRMYHKTDNHWNEYGSYVAY
                     EAIMDSLSVDFPNLNPIPISKFNIETVEAKGMGLTNMMGIYDEVYEDKIMCKPDFKRK
                     SKNGEKNNYPVVRGFPYTSQHEIVYTVANDSLPKMLLIRDSFGATLIPFLSEHFSKSV
                     FIFDG"
BASE COUNT         1078 a          460 c          594 g         1160 t
ORIGIN      
        1 tattgatgtc tatagacgac gtacacctgt tcaaaataag tatgttgacc ttgcgttgta
       61 tatctcactt ttccctcaat taattgcagg gccaatagtg agatataatg atattgcaga
      121 acagctgtct gtccgggaaa acaacagggc taactttgtt tcgggaattg aacgatttgt
      181 aataggactt gcaaaaaaag tactgattgc caatcaattt gcattacttg ccgatactgc
      241 ctttagcatg gctcctgaaa atctttcaac ctttattgca tgggctggtg ttgttgccta
      301 ttcttttcaa atatatttcg acttttctgg gtactctgat atggcaatcg gcctcggaag
      361 gatgtttggg tttaaatttc ttgaaaattt taattttcct tatatagcca aatcaatacg
      421 tgaattttgg cgacgatggc atatttcatt gtcaaactgg ttccgagact atttatacat
      481 accattgggt ggaaatagaa aagggaacta cagaacctat tttaatctcc ttatagtttt
      541 ctttgttact ggaatttggc atggtgcaag ctggaatttt gttgcatggg gtatgttgca
      601 cggtttgttt atggttattg aaaaacttgg tttcaacagg ctactaacga aattatggag
      661 accttttcag catatttata ctctgtttat cgtgatgatg gcatgggttc ttttccgtgc
      721 agacgatttt acacatgcat ggggatattt tgaagcgatg ttctcatata aaagtacaaa
      781 tctaaatatt gacatacttc atacttttct taataatgaa atttatctcg ttttggtaat
      841 tgcaattttg agctcaacac gcatatgggt tattatctac aataatgcat tagcgatggt
      901 ttcgaaaaat aatagttatt taaatattgc aaatggagta tggtcattta ttgttttaat
      961 ttttgtagta ggagtaatga ttttatctac aaactatctt gttgttagtt cgtataatcc
     1021 gtttatctat tttagattct gatgatgaag ggtatcaaag aaatatttgt ttcggttact
     1081 ttcatggtta ttttgatttt tcctatggtt gactcagtat ttcattttgt acctgaaaaa
     1141 gaaattaggg aaaatcgtgc cttaaaatta aagcctgagc ttgattggtc tgatattgat
     1201 aattttcctg aagagtttga taaatattat actgataatt tcgactttag aaatcaattt
     1261 ctactattta acagtagact taaaattcaa ttatttaatg tgccacctgt aaactcaaag
     1321 gcaattattg gagatgatgg atggatgtat cttattaaaa acatgaagga tgtctatttg
     1381 ggaaaaaata tcgccgacac taacaaactg aaaaggtaca gtgacatttt caattacaga
     1441 aagaaatatt tagacagtat tggatgtgca tattatattg taattgcacc tgtaaaaaca
     1501 tcagtttatc cggagtatct acctttatcg caacgtaact taccacaaac atccttaact
     1561 gatcagttga ttaacttgct tgacacaatt gaggagctaa atattgttga tttacgacca
     1621 atatttagag attcaaaagg tgatatacgt atgtatcata aaactgatac tcactggaat
     1681 gcgtatggaa gttatgttgc ttataaagca ataatgaatg ttatttcaat tgatttccct
     1741 gaacttattc cacacagtat ctcaaagtat aaaattgact ccatagatgt taaaggcatg
     1801 aatctgacta gtattttggg tatttatcac ggaatatttg agaataagat cacctgtgaa
     1861 ccaactttta aaaagaaaag taaagaagga caaaagcgta attatcctgt ttatgaatgg
     1921 tttcgtttta aatcagaata tgaacaggtg tttacaactg aaaatgacag tctcttaaag
     1981 ttaatgctgg tacgtgattc ttttggcaaa gcaataatgc cgtttcttag tgaacatttt
     2041 agcgaaagtg tgtatatttt tgatggctgg catcatgatc ttaatgaaga tattgttata
     2101 aatgaaaagc cggatatttt tgtgcaatta gttttagaat ctcagattcc gtatctttat
     2161 aaaagtgcaa aaaaaccata attattaaat tggagttgac cattttacgg caagatactt
     2221 atgtaaacaa attaattatc agatattaat aatgaattat tgtaatattg aataacttga
     2281 aagaaatact tgttttgata acctttatgg ttatattggt gctgccctat actgattcag
     2341 tatttcattt tgtgcctgaa gaagaaaata cagagaatcg tgctttaaaa acaatgcctg
     2401 aatttgattg gtcttttatt gataattttc ctgaagagtt tgataaatat tatagcgaca
     2461 actttgatct aagaaatcaa tttctttcat ttaatagcaa actaaaatat cagttgttca
     2521 ataaacctcc tgtggaaggt aaagcattta ttggatatga tggatggatg tatcttgtta
     2581 aagatgagat ggatctatat tatggaaaca cagttgcaaa aagtgatgaa ttgacaaatt
     2641 attatgatat ttttagatac aggaaaaatt ttcttgacag tattgggtgt aaatattatg
     2701 ttgtaattgc accttcaaaa gcatcagtat accctgaatt tcttccttta tcaaaacgta
     2761 agtctgttga aaagacatta actgaccaga tagttagttt acttgatact gttaccggtc
     2821 taacagtaat cgatttacgc actgttctta aaaaagcaaa aagtcgtgat attcgaatgt
     2881 accataaaac agataatcac tggaacgaat atggaagtta tgttgcttat gaagctataa
     2941 tggatagttt atccgttgat ttcccaaatc taaatccaat accaatatcg aagtttaata
     3001 ttgaaactgt tgaagctaag ggaatgggac ttaccaatat gatgggtatt tatgatgaag
     3061 tttatgaaga taaaattatg tgtaaacctg actttaagcg gaaaagtaaa aatggcgaaa
     3121 aaaataatta ccctgttgtt cgtggattcc catatacttc gcaacatgaa attgtatata
     3181 ctgttgctaa cgatagcttg ccgaaaatgt tactgattcg cgactcattt ggtgcaacac
     3241 taattccgtt tctaagtgag cattttagca aaagtgtttt tattttcgat gg
//
LOCUS       DASCQP010000236         1510 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000878811, whole genome shotgun sequence.
ACCESSION   DASCQP010000236 DASCQP010000000
VERSION     DASCQP010000236.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1510)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1510)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1510
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000878811"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..411
                     /locus_tag="QF480_03965"
     CDS             <1..411
                     /locus_tag="QF480_03965"
                     /inference="COORDINATES: protein motif:HMM:NF015588.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl hydrolase family 65 protein"
                     /protein_id="HJN05749.1"
                     /translation="RVVHSQLANLTNNKKLSWELYKEALMSDYDDIQGGTTAEGIHMG
                     VMAGTVMIALTSYAGVDLRDDIIKIKPNLPEQWKELEFSLTFKRIVYHFIITNKYVRV
                     VTSADTELVVFGENYEITKNENFTFKNIESLSFN"
     gene            448..1089
                     /locus_tag="QF480_03970"
     CDS             448..1089
                     /locus_tag="QF480_03970"
                     /inference="COORDINATES: protein motif:HMM:NF012697.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05750.1"
                     /translation="MLEDVLLITEKHTTAANIIIKEILKKKKDKYVVAISGESGSGKS
                     ELTHVIARNLRNYGIVAKAIHVDNFYNTLPIERAFWRQKNGIENVVGLNEYDWDKINQ
                     TIDDFKHNKKSTMPCVDLVTEQVDELTTDFNGIDMLIIDGLYAINIDKTDIRILIELT
                     YHETKKSQIDRGKELDTDLRRKILEQEHKVVESLKNKATIRISKEYKVILLSS"
     gene            1266..>1510
                     /gene="grpE"
                     /locus_tag="QF480_03975"
     CDS             1266..>1510
                     /gene="grpE"
                     /locus_tag="QF480_03975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013612462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000774 - adenyl-nucleotide exchange
                     factor activity [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HJN05751.1"
                     /translation="MGEENIEDVTFENNDDNVEPEQGNEKDMTKQKPKPEKKSRKLKA
                     EKKIDELQDQYNELNDKYLRIYSEFDNYRKRTNKERL"
BASE COUNT          601 a          205 c          270 g          434 t
ORIGIN      
        1 agggttgttc actcgcaatt ggcgaacctc acaaataaca aaaagcttag ttgggaacta
       61 tataaagaag ctttaatgtc tgattatgat gacattcaag gaggcactac tgccgaagga
      121 attcatatgg gtgtaatggc aggaactgtt atgatcgctt taacttctta tgctggtgtt
      181 gatttaagag atgatataat taaaattaaa cccaacttgc cagaacaatg gaaagaattg
      241 gaattctcac ttacgtttaa aaggatagtt tatcatttta ttattactaa caaatatgtt
      301 agagttgtaa caagtgcaga tacagaatta gttgtatttg gtgaaaatta tgaaataact
      361 aaaaatgaaa actttacatt taaaaatatc gaatcgttga gttttaatta actatcaatc
      421 acaatcgtaa aataaaaact aactaatatg ttagaagacg tattattaat aactgaaaag
      481 catacaactg ccgctaatat tattattaaa gaaattctta aaaagaagaa ggacaaatat
      541 gtagttgcaa tttcaggaga atcaggttca ggaaagtctg aacttactca tgttattgcc
      601 aggaacttac gtaactacgg cattgttgcg aaagctatac atgttgataa tttctacaat
      661 acccttccta ttgaacgagc cttttggcgc caaaaaaacg gaatagaaaa tgtggtaggc
      721 ctaaatgaat atgattggga taaaataaac caaactatcg atgacttcaa acacaataag
      781 aaatctacta tgccatgtgt tgatcttgtc accgagcaag ttgatgagct aacaactgac
      841 tttaacggaa tagatatgtt aattattgat ggtttgtacg ctattaatat tgataaaact
      901 gatattcgaa ttctgattga attaacatat catgaaacaa aaaagtctca aattgacaga
      961 gggaaggaac tagataccga tttaagaaga aaaattttgg aacaagaaca taaggtagta
     1021 gagtctctta aaaataaagc gacaattaga ataagtaaag aatataaggt tattttgcta
     1081 tctagctgat attagctata taacataatt taaataagtt taaggattcc tttttgttga
     1141 tcattcagaa ttcgatattc tcaattttta ttttctgcca atttgacgga aatcagtact
     1201 tggcagagct tttgctattg cacttgagca agaaataatc taatgcactt aaaagattaa
     1261 tgaacatggg tgaagaaaat atagaagacg taacttttga aaataacgac gataacgttg
     1321 agccagaaca aggcaatgaa aaggatatga caaaacaaaa accaaagccg gagaaaaaaa
     1381 gcaggaaatt aaaggctgag aagaaaattg acgaacttca agatcaatac aatgagctga
     1441 atgacaaata cctacgcata tattccgagt ttgataatta cagaaaacga acaaataaag
     1501 aaaggttgga
//
LOCUS       DASCQP010000237         1751 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000887510, whole genome shotgun sequence.
ACCESSION   DASCQP010000237 DASCQP010000000
VERSION     DASCQP010000237.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1751)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1751)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1751
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000887510"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            134..1108
                     /locus_tag="QF480_03980"
     CDS             134..1108
                     /locus_tag="QF480_03980"
                     /inference="COORDINATES: protein motif:HMM:NF014647.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BMP family ABC transporter substrate-binding
                     protein"
                     /protein_id="HJN05752.1"
                     /translation="MKNFFYILILLPLLFAFEASSADYALIYDEGGKFDKSFNEAAYD
                     GAEKFKAETGEDYIEFEAATNAQIEQGLRKLAQRDAKVIVAMGFAMADGVAAVAAEHP
                     DINFTIVDVDWLDGANIQQIAFREHEGSYLVGIIAAMKSESGVIGFVGGMDIPLIRKF
                     HGGYEQGAKSVNPNITVLMNMTGTTGAAWNDPERGAELTKGQIAKGADVVYHAAGTTG
                     EGVLQAAADSGILGIGVDKNQNHLHPGKVLTSMLKRVDVAVYDAFMSTKNGTYEAGKF
                     SYGLAEGGVGWALDENNESLITADMKAAADKAASDIISGNIEVIDVSK"
     gene            1157..>1751
                     /locus_tag="QF480_03985"
     CDS             1157..>1751
                     /locus_tag="QF480_03985"
                     /inference="COORDINATES: protein motif:HMM:NF012235.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HJN05753.1"
                     /translation="MVSQPILELQDINKSFGHVQANKNISITVNKGDIHGIVGENGAG
                     KSTLMSIVFGYYQADSGIIKINGKQIEIKSPHQSILCGIGMVHQHFMLVENFTVLENI
                     ILGFEGEFVFGKKLKEAKRNLEELCESYNLKVDLDATISDLSVGYRQRVEILKALYRK
                     AEILILDEPTGVLTPQEVDELFKILRSLNDEGKTIILI"
BASE COUNT          582 a          244 c          368 g          557 t
ORIGIN      
        1 ttaggtgatg ctggcgaccg ctatatggga acataattat ggtggattaa ttcataaaaa
       61 acccctttta ccttttattt ttttgcccta ttatcaccaa tttattcaac aaatttaata
      121 ctcgaggaaa cttatgaaga atttttttta tatattaatt ttacttccat tactctttgc
      181 ttttgaagcc tcttctgctg attatgcttt aatatacgat gagggtggaa aatttgataa
      241 atcatttaat gaagccgcat atgatggggc tgagaaattt aaagctgaaa caggtgaaga
      301 ctatatagaa tttgaagcag caacaaatgc acaaattgaa caaggtcttc gcaaactggc
      361 tcagagagat gcaaaagtta ttgtagcaat gggctttgca atggccgatg gtgttgcagc
      421 tgttgcagca gagcatccag atatcaattt tactattgta gatgttgatt ggcttgatgg
      481 tgcaaatatt cagcaaatag ccttcagaga acacgaaggt tcatatcttg ttggtataat
      541 tgctgcaatg aaatctgaat caggtgttat aggttttgtt ggaggtatgg atataccact
      601 tattagaaaa tttcacggtg gatatgagca aggtgcaaag tcagtcaatc caaacattac
      661 agtgcttatg aatatgaccg gaactacagg agcggcatgg aacgatcctg agagaggtgc
      721 tgagttaact aaaggacaaa ttgctaaagg cgctgatgtt gtttaccatg cagctggtac
      781 tacaggcgaa ggcgtgcttc aagcagcagc ggatagtgga attcttggta taggtgttga
      841 taaaaatcag aatcaccttc atccaggaaa agttctaacc tcaatgctta aaagagttga
      901 tgttgcagtt tatgatgcat ttatgtcaac taaaaatgga acttatgaag ctggtaagtt
      961 ttcatatggc ttggccgaag gtggagtagg ttgggctcta gatgaaaata atgaaagttt
     1021 gataactgcg gatatgaaag cagctgctga taaggccgct tcagatatta ttagtggaaa
     1081 tattgaagtt atagacgttt ctaaataata tttttttggt tgtgagactt gttgaaacta
     1141 ctatttacta gattttatgg tctcacaacc aatacttgaa cttcaagata taaataaatc
     1201 ttttggtcat gttcaggcca ataaaaatat ttcaataacc gttaataagg gcgatattca
     1261 cggaatcgtt ggtgaaaatg gtgccggaaa gtcaactttg atgagcattg tttttggtta
     1321 ttatcaagca gattcaggga ttataaaaat taacggtaaa caaatagaaa ttaaatctcc
     1381 tcaccaatca atattatgcg gaataggaat ggtgcatcag cactttatgt tagttgaaaa
     1441 ttttacagtt ttagaaaata ttattcttgg tttcgaagga gagtttgttt ttggaaaaaa
     1501 actaaaagaa gctaaaagaa atttagaaga actgtgtgaa agttataatt taaaagttga
     1561 tttagatgca acgatatctg atctttctgt tggttatcgt caaagagttg aaattttaaa
     1621 agctttatat agaaaagcag agatacttat cttagatgaa ccaaccggag tccttactcc
     1681 tcaagaggtt gatgaactat ttaaaatatt acgttcgctg aatgatgagg gaaaaacaat
     1741 tattcttatt a
//
LOCUS       DASCQP010000238         4580 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000889634, whole genome shotgun sequence.
ACCESSION   DASCQP010000238 DASCQP010000000
VERSION     DASCQP010000238.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4580)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4580)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4580
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000889634"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..348)
                     /locus_tag="QF480_03990"
     CDS             complement(<1..348)
                     /locus_tag="QF480_03990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05754.1"
                     /translation="MKSRIATFLIAVNMFLTGTAFAANPVTKTNNASKEVSTLLKQEL
                     KYPKFAKDSKFECCVLVRLTINKDGTFKVDCINCTSPIMKAHVTKAIEKISRKELARY
                     AGMQICYKINYKLI"
     gene            703..2325
                     /locus_tag="QF480_03995"
     CDS             703..2325
                     /locus_tag="QF480_03995"
                     /inference="COORDINATES: protein motif:HMM:TIGR00225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HJN05755.1"
                     /translation="MSKKNNKIQIYLPFAFSIVLIAGMWLGSLMVGNQNVSNTILPIG
                     YNSYNKLDDVLDYIVQDYVDSVALNGLETDAIRGMLKKLDPHSMYITNEEFHHVNDPL
                     MGSFEGIGISFRIEKDTITVINPIPGGPSEKVGLMAGDRIVNIDDTLVAGIGITNNGA
                     IKKLKGKKGTKVTVSNYRRGVPKLIDFTITRDVIPTYSIDIAYMVDDSIGYIKLNKFS
                     ATTYDEFKEAAGQLKEQGMTKLILDLRSNPGGFLQAAIDISDEFIIDGQLIVYTEGNN
                     RQRQHAFATEVGDFEQTDVAVLIDENSASASEIVAGALQDNDKGLIIGRRSFGKGLVQ
                     EQINLPDGSAVRLTVSRYYTPTGRCIQKPYENGNKEGYYEDHIQRYLNGELQSQDSIH
                     FDDSLQFTTPAGKTVYGGGGIMPDIFVPIVTDTIHTSYNILANKGLIFQFAFDYTDRH
                     RANLNKYKDFDAFNREFNMDNRTFNELIDYADGKGIKLTDNKIDISKEKIETLFKAFV
                     GRNVLNEKGFYPIYHNIDTTFLRAVDEIRNFN"
     gene            complement(2367..>4580)
                     /locus_tag="QF480_04000"
     CDS             complement(2367..>4580)
                     /locus_tag="QF480_04000"
                     /inference="COORDINATES: protein motif:HMM:NF036531.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004866 - endopeptidase inhibitor activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-2-macroglobulin family protein"
                     /protein_id="HJN05756.1"
                     /translation="LKVGTLERKIKSQKELMIIPNVPRFVRQGDTLIFSAKVINFTEN
                     EILAKTNIEFFDAITMEPLSIFIANNHKTISQNIDPKQSISVSWGISIPENINMLGFR
                     ITASTGTFIDGEERMFPVLTNRMLVTNTMPMNVSALSTANFSFKGLSEFNKKESSIRN
                     YRYTLEFTSNPAWYAIQALPYLSSPSSKNNMSLFNNYFANALSLYIVNSNPKIKAVFE
                     SWKYKTPDAFLSNLEKNQDLKNIIITSTPWVLDAEDETEQKRRISILFDVNRMANEKE
                     NLTRKLLEAQLSSGAWPWFKGMREDRHTTQTIVLGMAKLNHKGVIDLDSDKKRFHMVK
                     KAVSWLDAKIANDYVTLKKKSGKSLNNYQIRSSQTQYLYIRALLVDIMPIPEKSKEAF
                     QYYIDQTKKYWLKQSNYLQGMMAITLNKFGYRNDSEAIIRSLKERSLYNKEMGMYWRQ
                     KAGWNWYQAPIETQTMMIETFSELENNPTIIEQLKIWLLKQKQTQHWNTSSATAEAVY
                     TLLMFGNNALDNNNLVDITVGNQIIDINGNSDITAESGTGYFSTSWSGSEITPELSQI
                     SITNPNNHIAWGAAYWQYFEDLDKIKTNISPLSINKKLFIEKLTPSGPILIPVDTNLE
                     LNPGDKIISHLIISTDRNMEYIHLNDMRATAFEPVSPLSGYTYNGGLWYYKNITDVST
                     DFFIRYLNKGTYVLEYPLYVTQIGDFTVGIATIQSMYAPEFSAHSSGLRVKVSEQ"
BASE COUNT         1446 a          763 c          806 g         1565 t
ORIGIN      
        1 gatcagctta tagttaatct tgtagcaaat ttgcatacct gcgtaccttg caagttcttt
       61 gcggcttatc ttttcaatag ctttggtaac atgtgccttc attattgggc tcgtacaatt
      121 aatacaatca actttaaatg taccatcttt attaattgtt aatctaacca gtacacagca
      181 ctcaaactta ctatccttag cgaatttagg gtatttaagt tcttgcttta ataatgtaga
      241 cacctctttc gaagcattat tagtttttgt tactgggtta gcagcaaaag ctgttccggt
      301 aaggaacatg ttcactgcta tcaaaaaggt tgcgattctt gatttcatgg cagtaaaatt
      361 tagaaatgtt tcaacctata aaataccaat agtataccgc aatttataat taaaagagga
      421 tcagcaactt atcgtcttaa tttgtattgt gagttcaaaa aaatgttcgc actcaaacac
      481 aaagtgtcta agttcgtaca cttttatggt tcgtaatgtt tattgaaaaa ttgtgaaata
      541 gagaattgag attgctgaga cattcataat tagagatata tggagtttaa atgttcaatt
      601 caccattatg gtataaaggt tgtacaacaa ctcaaatagg agtaattgaa caatagatat
      661 tcttgttaat ttcaatttta taattttgca aaaaaatatt taatgagtaa aaaaaataat
      721 aaaattcaga tataccttcc ttttgcattt tcaattgtcc ttatcgctgg tatgtggctt
      781 ggctcgctaa tggttggaaa tcaaaacgta agtaacacta ttctaccaat tggttataat
      841 tcgtacaaca agcttgatga tgttctcgat tatattgtac aagattatgt tgattcagtt
      901 gcattaaacg gtcttgaaac ggatgcgatt agaggtatgc ttaagaaact ggatccacat
      961 tcaatgtata taactaatga agaatttcac catgtaaacg atcctttaat gggcagtttc
     1021 gaaggaattg gaatttcgtt tcggatcgaa aaagatacaa taacggttat taatccaatc
     1081 cctggaggac catctgaaaa agttggcctt atggcaggcg acagaattgt aaatattgat
     1141 gatacacttg ttgcaggtat tgggattact aataatggtg ctataaaaaa actcaaggga
     1201 aaaaagggga cgaaagtaac agttagtaat taccgccggg gtgtaccaaa attaattgat
     1261 tttacgataa cacgtgatgt gatacctact tatagcattg atattgcata tatggttgat
     1321 gatagcattg gttacataaa gctgaataag ttctctgcaa caacttatga tgaatttaaa
     1381 gaagctgctg gacaacttaa ggaacaggga atgaccaaat taatccttga cttgaggagt
     1441 aatccgggag gctttctaca ggcggccatc gatattagtg atgaatttat cattgatggt
     1501 caactaatag tatatactga aggcaataac cgtcagagac aacacgcttt tgctactgaa
     1561 gttggtgatt ttgaacaaac tgatgtagca gttcttatcg atgaaaattc ggcatcagca
     1621 agtgaaatcg ttgctggtgc attacaggat aacgataaag gtttaataat tggacgacgc
     1681 tcttttggta aaggattggt tcaggagcaa attaatcttc cagatggttc tgccgttagg
     1741 cttactgtgt cgagatatta tacacctaca ggacgttgca ttcaaaaacc ttatgaaaat
     1801 ggtaataaag agggctatta tgaagatcat attcagcgtt atctaaatgg ggaactgcaa
     1861 agtcaggata gtattcattt tgatgattct ctacaattta caactcctgc cggaaaaact
     1921 gtttatggcg gtggcggtat aatgccagac atttttgttc ctatcgtaac tgacacaata
     1981 catacatcct ataatatact tgccaacaaa ggtttaattt tccaatttgc ttttgattat
     2041 acggacaggc acagagccaa cttaaataaa tataaagact ttgatgcctt caaccgtgag
     2101 tttaatatgg acaacagaac ctttaatgag cttattgatt acgcagatgg aaaagggata
     2161 aaactgacag ataataaaat agatatatca aaagaaaaaa tagaaaccct atttaaggca
     2221 tttgtaggta ggaatgtact taacgaaaaa ggtttttacc ctatttatca taatattgat
     2281 actacttttt taagggctgt agatgaaatt aggaatttta attaataagt agcctcttca
     2341 gcatacgctg aaaattatca acatcattat tgctctgata cttttaccct tagccctgat
     2401 gaatgtgctg aaaattcagg agcatacatg ctttgtatgg tagcaatacc aactgtaaaa
     2461 tcaccaattt gcgtaacata taacggatat tcaagtacat aggttccttt atttaaatag
     2521 cgtataaaaa agtcggtgct aacatccgtg atattcttgt aataccatag tccaccatta
     2581 tatgtatacc ctgacaaagg tgatactggc tcgaaagcag tagccctcat atcattcaga
     2641 tgaatatatt ccatatttct gtcggtactg ataattaagt gtgaaattat tttatctcct
     2701 ggatttaact ccagatttgt gtcaacaggt atgagtatag gtcctgatgg agtaagcttt
     2761 tcaatgaaca actttttgtt aattgacagg ggtgaaatat tagtctttat tttatccaga
     2821 tcttcaaaat attgccagta agctgccccc caggcgatat gattgttagg gttagttatt
     2881 gatatttgcg aaagctcagg ggtaatctca cttcccgacc aggacgtact gaaataacca
     2941 gtaccagatt ctgctgtgat gtcactattg ccattaatat caataatctg gttgcctacg
     3001 gtgatatcaa caagattgtt attatcaaga gcattatttc caaacatcaa caaggtgtaa
     3061 acagcttcag ctgttgctga tgaagtattc caatgttggg tttgcttttg ttttagtaac
     3121 catattttta actgttcaat tattgtagga ttgttttcta attccgaaaa cgtttcaatc
     3181 atcattgttt gtgtttctat aggtgcttga taccagttcc atcctgcttt ttgacgccag
     3241 tacataccca tttctttatt gtatagagat ctttctttta acgacctaat aattgcttcc
     3301 gaatcattac gatagccaaa tttattgagg gttatagcca tcattccttg taaataatta
     3361 gattgtttta gccagtattt ttttgtctga tcaatataat attgaaaagc ttcttttgat
     3421 ttttcaggta tgggcattat atctacaagt aaggccctga tatacaaata ttgagtttgt
     3481 gaacttctta tttgatagtt atttaatgat ttaccacttt tctttttaag ggttacataa
     3541 tcattagcaa ttttagcatc taaccatgaa acagctttct taaccatgtg aaagcgtttc
     3601 ttatcactat ccagatctat tacacctttg tggttcagct ttgccattcc aagtacaatt
     3661 gtttgcgttg tatgccgatc ctcacgcatt cctttaaacc atggccaggc accacttgat
     3721 aactgagctt ccaacaactt tctggttagg ttttcttttt cgttagccat acgattaaca
     3781 tcaaatagta tacttattct gcgtttttgt tctgtttcat cttcggcatc aagaacccaa
     3841 ggtgttgaag taataattat atttttgaga tcctgatttt tttcaagatt tgacagaaat
     3901 gcatccggag ttttatattt ccaactttca aaaacagcct ttatttttgg attactattt
     3961 acaatgtaca atgataacgc atttgcaaaa taattattaa aaagagacat gttgttctta
     4021 ctgctaggag aacttaaata aggcaatgct tgaatagcat accatgccgg gtttgaagta
     4081 aattcaagag tgtacctata gttccttatt gacgattcct ttttgttaaa ttcggacaga
     4141 cccttgaaac tgaaattagc tgtgcttaaa gcgctaacat tcatcggcat tgtattagtg
     4201 accaacatcc tgtttgtgag caccggaaac attctttctt ctccatctat gaaagttccg
     4261 gttgaagccg ttatcctgaa acctaacata ttaatatttt caggaatgct aataccccag
     4321 ctaactgaaa tactttgttt tggatcaatg ttttgcgaaa ttgttttgtg attattcgct
     4381 atgaatatag acaatggttc catggtaatg gcatcaaaaa attcaatatt agtcttagcc
     4441 aatatttcat tttcagtaaa gttaattacc ttggcagaga atattaatgt gtctccttgc
     4501 cttacaaacc ttggaacatt tggaattatc atcaactctt tttgcgattt tatttttctt
     4561 tcaagcgtcc ctaccttaag
//
LOCUS       DASCQP010000239         3755 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000900754, whole genome shotgun sequence.
ACCESSION   DASCQP010000239 DASCQP010000000
VERSION     DASCQP010000239.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3755)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3755)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3755
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000900754"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..959
                     /locus_tag="QF480_04005"
     CDS             <1..959
                     /locus_tag="QF480_04005"
                     /inference="COORDINATES: protein motif:HMM:NF025420.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF4249 family protein"
                     /protein_id="HJN05757.1"
                     /translation="TILNFNMRKQEIVGSCKLAEKRQKSVKYDLLQSTVFGLRTLASL
                     IIILLFGTVILNSCTKRIDIKLDSTYERLAVAGFITPQKGDQYVRLTKTSNYFSNKPA
                     PTVSGAVVTISDDSSTVEFSEDFNNPGYYLAPEDYFGISGTTYHLDITLSESINGNVN
                     YKAHEEMPHLADNIDSVVVEYNEQYERWMVRLYAWEPPSTDFYMFNGMRNGNMITDTV
                     SRINISDDRLFNGNYTSGAVVLVLYKDELELGDTFTLILSNITEEYANYMTDLQLELQ
                     PHDPMFSGPPANVRTNINNNAVGYFAAFPSAFTSTTVKPIDF"
     gene            1096..2070
                     /gene="dcm"
                     /locus_tag="QF480_04010"
     CDS             1096..2070
                     /gene="dcm"
                     /locus_tag="QF480_04010"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009230531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003886 - DNA
                     (cytosine-5-)-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA (cytosine-5-)-methyltransferase"
                     /protein_id="HJN05758.1"
                     /translation="MEKIKFIDLFCGIGGFRTAMDQACVENDLIPECVFSSDIDAYCQ
                     DSYEANFGERPEGDITKIDEKNIPDHDILFAGFPCQPFSIIGQMQGFNDIRGTLFFDI
                     ARIIKHKKPKAFILENVKQLVGHDRGKTLKVIVKTLEKELGYNVQYVVLNALDYGLPQ
                     KRERVIIVGHREPILFSFPSPIRPFKPLTEIIEKKVDKKHFASEYITKKRTEKHKSAY
                     KLSIWHENKSGNISSYPYSCALRAGASYNYLLVNGERRLTPREMLRLQGFPDTYKIVV
                     SDSQAKKQAGNAVPVNVVKAVTLKLLPFVATSMQMDLVLREYEIGYGE"
     gene            2060..2812
                     /locus_tag="QF480_04015"
     CDS             2060..2812
                     /locus_tag="QF480_04015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05759.1"
                     /translation="MENNKSPKLRTVHKSVSAFPLNEFPKEFPFLLGKELIYLLASKG
                     KSELEGSEWENIFANCIGADWKPSNVGLDDVVKGNTAWGAKTVKATRPSTQKKVRLIS
                     GRNSPNYSFGERSDQKADAGFIGKLVLEIWNERVSAIREKFKHLRTVVLIKSNDLTEV
                     VVFEFDTIRYDYELYIWEWNKNNNLVGTCKKTGEHTFTWQPHGSQFTIIENVPEKGLI
                     VNIKQPKPLDKEQVLKSLGFDKSWVTVTQKTK"
     gene            3089..>3755
                     /locus_tag="QF480_04020"
     CDS             3089..>3755
                     /locus_tag="QF480_04020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007135513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lyase family protein"
                     /protein_id="HJN05760.1"
                     /translation="MELSSNTSISPIDGRYRNKTEELAEYFSEYALHKYRIQTEIEYF
                     IALCNIPLPGLENFDKSQFDQLRDIYIKFSTTDANSIKQIEKTTNHDVKAVEYFIKEC
                     IEEIGLGEYKEFIHFGLTSQDINNTALPLSLKAAHTKVFIPAFEELIEKINICAFEWK
                     NVSMLARTHGQPASPTKLGKEIYVFVERLENQLMTLGSIPFSGKFGGATGNMNAHNVA
                     YPEI"
BASE COUNT         1318 a          603 c          671 g         1163 t
ORIGIN      
        1 gtacaatttt aaattttaat atgagaaaac aagaaatagt tggaagttgc aagctagcag
       61 aaaaaagaca gaagtctgta aaatacgatt tacttcaatc tacggtcttc ggtcttagga
      121 ctttagcgtc cttaataatc atactcttat ttggaacagt gatcttgaat tcttgtacta
      181 aaaggattga tatcaaactg gactcgactt atgagaggct cgcagttgca ggttttatta
      241 cgccacaaaa aggcgatcaa tatgttcgct taacaaaaac atctaattat ttctctaata
      301 agcctgctcc taccgtatca ggtgcagttg ttacaatttc ggatgattcg tcaactgtgg
      361 aattttctga ggattttaat aatccggggt attacctggc acctgaagat tattttggaa
      421 tttccggtac tacatatcac cttgatataa cgctttcaga atcaataaac ggtaatgtca
      481 attacaaagc tcatgaagaa atgcctcatc tagccgataa tattgattca gttgtagttg
      541 agtataacga acaatatgaa agatggatgg tacgacttta tgcctgggag cccccatcaa
      601 ctgatttcta tatgtttaac gggatgagga atggcaacat gattactgac actgtttctc
      661 gcataaatat cagtgacgat agattattta atggaaatta cacttcaggt gcagttgtgc
      721 tggtattata caaagatgag cttgagttgg gagatacgtt tactcttatc ttatcaaata
      781 ttactgaaga atatgcaaac tatatgacag accttcagct tgagttgcaa cctcacgacc
      841 ctatgttcag tgggccacca gccaatgttc gaactaacat taataacaat gctgttggct
      901 attttgcagc ttttccatct gcatttacct ccacaacagt taagcctatt gatttttagt
      961 taagatgttt atttaggatt gttatgcata attgcaatca accacagcat taacaaataa
     1021 actgtataac ttttatataa agtgatatta ttttaatgac caatatatta catttgagta
     1081 ataattaatt cagcattgga aaaaataaaa tttatagatt tattttgtgg gattggaggc
     1141 tttagaaccg caatggatca ggcttgtgtc gaaaacgact taataccaga atgtgtattt
     1201 tcttcagaca ttgatgctta ttgtcaagat agttatgaag ctaattttgg tgaaagacca
     1261 gaaggtgata taactaaaat tgacgaaaaa aatattcctg atcatgatat tttatttgca
     1321 ggttttcctt gccaaccatt tagtattatt ggacaaatgc aaggatttaa tgatatccgt
     1381 ggtactctat tttttgacat tgctagaatt ataaaacaca aaaagccgaa agcatttatt
     1441 ttagaaaatg taaagcaatt agttggtcat gataggggga aaaccttaaa agttattgtt
     1501 aaaaccttag agaaagaatt aggatacaac gtacaatatg tagtactaaa tgctcttgat
     1561 tacggacttc ctcaaaaacg cgaacgtgta ataattgtag gtcataggga gcctattttg
     1621 tttagtttcc cttctcccat aaggccattc aaaccattaa ctgaaatcat tgagaaaaaa
     1681 gttgacaaga aacattttgc ttcagagtat attactaaaa aacgtacaga gaaacataaa
     1741 tctgcatata aattatctat ttggcacgaa aataaatctg ggaatatatc ttcttaccca
     1801 tattcttgtg cgcttcgtgc tggtgcttca tataattatt tgctcgtaaa cggagaaaga
     1861 cgtttgacac caagagaaat gttacgttta caaggttttc cagatactta taaaattgtt
     1921 gtatctgata gtcaagctaa gaaacaagct gggaatgcag tacctgtaaa tgtagtaaaa
     1981 gcagttacct taaagttact accttttgtt gcaacatcaa tgcaaatgga tttagtttta
     2041 agggaatatg aaataggtta tggagaataa taaatccccc aaattaagaa cagtacataa
     2101 atcagtttcg gcatttccac ttaatgaatt tccgaaggaa tttccctttt tacttggtaa
     2161 agagttaata tacttacttg cctcaaaggg aaaatcagaa cttgaaggtt cggaatggga
     2221 gaatattttc gcaaactgta ttggtgctga ttggaaacca tccaatgtgg ggcttgatga
     2281 tgttgtaaaa ggaaacacag cttggggtgc aaaaacagtt aaggcaacta ggccatctac
     2341 tcaaaaaaaa gtaaggttaa tatcagggcg taactctcca aattattctt ttggagaacg
     2401 tagtgatcaa aaagcagatg caggatttat tggaaaactt gtacttgaga tatggaatga
     2461 gagggtatca gcaattcgag aaaagtttaa acatttacgt acagttgtac taatcaaatc
     2521 caatgattta acagaagttg tagtatttga gtttgacact attcgttatg attatgaact
     2581 ttacatttgg gaatggaata agaataataa ccttgttgga acttgtaaga aaacaggaga
     2641 gcatactttt acttggcagc cacatggttc acagtttaca ataattgaga atgttccaga
     2701 aaaagggtta atagtaaaca taaaacaacc taaaccacta gacaaggagc aagtattgaa
     2761 atccttgggc tttgacaaat cttgggtgac tgttacacaa aagactaaat aatctcccct
     2821 tagaaaagca aaagtgccta acaatgaata aaatataagc gagatagtag taatataaag
     2881 gtttatagct cattttaact ttcttgaaag tagaaaaatt actacttcga aatcacttgc
     2941 ttttcatata ctgactgtag gggtcataga gcataattaa taatattcat atttagtcaa
     3001 taaccaatcc aaatatctta attgatgctc caaacttatt catcaaactt cttaagatat
     3061 ttcttaattt tgaaccaaaa taatagtcat ggaattatct tcaaatactt ctatttcacc
     3121 cattgatggc agatatagaa ataaaacaga agaactagcg gaatatttct cggaatacgc
     3181 ccttcataaa taccgcatac aaactgaaat agagtatttt atcgcattgt gcaatattcc
     3241 actaccaggt cttgagaact tcgacaaaag tcagtttgac caattaagag atatttatat
     3301 caagttttct actaccgatg ctaactctat taaacagata gaaaaaacta caaaccatga
     3361 tgttaaggca gtagagtatt tcattaaaga atgtattgag gaaatcggac tgggagaata
     3421 caaagagttc attcattttg gattaacttc acaagatatt aataatacag ccctacccct
     3481 ttcacttaaa gctgcccaca caaaagtctt tattcctgca tttgaagaat taatagagaa
     3541 aattaatatc tgtgcttttg aatggaagaa tgtatcaatg cttgcacgaa ctcacggaca
     3601 acctgcatca cccactaaac taggtaaaga aatatatgtt tttgtggaaa ggctagaaaa
     3661 ccagttaatg acgttgggat ctataccttt ctccggtaaa tttggtgggg caacaggtaa
     3721 catgaacgct cacaatgttg cctaccctga aattg
//
LOCUS       DASCQP010000240         3485 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000901255, whole genome shotgun sequence.
ACCESSION   DASCQP010000240 DASCQP010000000
VERSION     DASCQP010000240.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3485)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3485)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3485
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000901255"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            553..1122
                     /locus_tag="QF480_04025"
     CDS             553..1122
                     /locus_tag="QF480_04025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05761.1"
                     /translation="MKNSDSRPIQIFIILFSVTLILIFGCSRSTSSSHDRDNIGISNS
                     SNNQSTEIAVSAPPFSEDIFPCSECHDAEWETNQERRVLDMHEEIVESFDHDSENRWC
                     LDCHNVDDRDYLKLASGKIIGYDESYLLCGQCHGDKLRDWKVGVHGKRTGEWNGEKQY
                     LLCVHCHNPHSPRFESIKPLPPPGRQEDI"
     gene            1152..1391
                     /locus_tag="QF480_04030"
     CDS             1152..1391
                     /locus_tag="QF480_04030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05762.1"
                     /translation="MQKTSNNPRRDFLKRIPIAIVSIGAFSFFGQKKHNRFTEKKFNT
                     LSKTEMDKIIKAKKFSIPTRIKPAPAPVASKNIKG"
     gene            1425..2324
                     /locus_tag="QF480_04035"
     CDS             1425..2324
                     /locus_tag="QF480_04035"
                     /inference="COORDINATES: protein motif:HMM:NF024644.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HJN05763.1"
                     /translation="MQKKEKNNSRRDFLKKLPVLAAGTAALASCTSDELDEFLQNNFK
                     TLTRAEKEDILIRLEKEYSEKYGKEFSVTDKPPIDGVLFGYGLDLSRCIGCRRCVYAC
                     VEENNQSRDPQVHWIQVLQMENQKGIDLAHADIHYNPEVVPEEGHFYMPVACQQCRNP
                     QCTTVCPTKATWQEEDGIVVVDYNWCIGCRYCMAACPYGARHFNWGEPYIPDEEVNPI
                     TSYLGNRPRMKGVVEKCTFCIQRVRDGKYPSCVEICPTGARKFGNLLDPDSEIRYILE
                     NKRVLIFKEELNTQPKFYYFFGV"
     gene            2367..>3485
                     /gene="nrfD"
                     /locus_tag="QF480_04040"
     CDS             2367..>3485
                     /gene="nrfD"
                     /locus_tag="QF480_04040"
                     /inference="COORDINATES: protein motif:HMM:NF015851.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NrfD/PsrC family molybdoenzyme membrane anchor
                     subunit"
                     /protein_id="HJN05764.1"
                     /translation="MSFLRFIVGSFRIITKGGRVYYSCLFFLFVLIVWGAFGYYNQLQ
                     EGLIVTNMRDSVSWAFYIGNFTFLVGVAAAAVVLVIPAYIYNWGPIKEIVIFGEILAI
                     CAVIMCLLFIMVDIGDPLRFWHMVPVIGTMNFPSSILSWDFFALLAYFVLNLIIVTHL
                     LFRQFHNKEYNKSLIWPLVLLSIPAAIAIHTVTAFLFNALPARPYWNSALLAPRFLAT
                     AFCSGPALLILIFQVLRKTTKFEIKDEAIFTIAELMVYAMFIYIFFTVSELFKEFYSD
                     TEHIVYWEYLLLGVEKNREIAIYGWSSFFMALTAFLLFLIPKTRKNFLTLNIGAVLIY
                     FSVYLEKGITLIVPGFTPDALGQYYFYVPSDVEVRTAVM"
BASE COUNT         1133 a          509 c          632 g         1211 t
ORIGIN      
        1 aaggctgtaa atgaatatct agatgaaatt ctcaaaactg tgactcattc actctacatg
       61 attcaccaat tagatattca ttagtcacat cacagtggaa tagtttgaat tgttcatctc
      121 attaattgat gaatactcaa tacatgtatt ttctaatact cataacgtga ggttattata
      181 tattgtttgc tcaattaatt cagtgctaaa tccttcgtaa agaatcatca tcataattta
      241 tgattgagtt cactcaatat ttagattcaa tctaaattta tctttttatg atttatatca
      301 tatcacgtta tataaattag ttaagctaag cagctacttt tacaaaagta agtatgtaac
      361 ttttgacaca tcttctgaat tggaatcaag tcattgggtc gttaaccatc tatatgtcaa
      421 ctagttatga gtttcatatt ttttgcagct gaatcttttt ataatgctgt gttataatcc
      481 taaatcagct gaatagtatg tgagtttaat agattaaagc aacgcgttta atattaataa
      541 tataagttcg tgatgaaaaa ttctgatagc cgaccaatac aaatatttat tattcttttt
      601 agtgtaacct tgatattgat atttggatgt agcaggagca cttctagttc acatgataga
      661 gataatattg gaatttcgaa tagttcaaat aatcaaagta ctgagattgc tgtttcagca
      721 ccccctttta gtgaagatat atttccatgt tcagaatgtc atgatgccga atgggaaaca
      781 aatcaggaaa gaagagtatt ggacatgcat gaagaaattg ttgaatcttt tgatcacgat
      841 agtgaaaaca gatggtgtct tgattgtcat aatgtagatg acagggatta tctaaagctt
      901 gccagtggta aaattattgg ttacgacgaa tcatatttgc tttgtggcca gtgtcatggt
      961 gataaacttc gtgattggaa agttggtgta cacggaaaaa ggacagggga gtggaatgga
     1021 gaaaaacaat atttactatg tgtacattgt cacaatcctc attcacctag atttgagtca
     1081 ataaagccat taccacctcc aggccgacaa gaggatattt aataataaac taattaagat
     1141 ctatatttat tatgcagaaa actagtaaca atccacgacg agatttttta aaaagaatcc
     1201 caatcgcaat tgtttcaatt ggtgctttct cgttctttgg acaaaaaaaa cataatcgtt
     1261 ttactgagaa aaaatttaat actttgtcta aaaccgaaat ggataaaatt attaaagcta
     1321 aaaagttctc gattcctaca aggatcaaac ctgcacctgc accggttgca tcaaaaaaca
     1381 taaagggata attttataaa tatttgacac aaattttgtg aagtatgcag aaaaaagaaa
     1441 aaaataattc acgacgagat tttttaaaga aattgcccgt tttggctgca ggtactgctg
     1501 ctttagcaag ttgtacatcg gacgaactag atgaattttt acaaaataat ttcaaaacat
     1561 taactagagc ggaaaaggaa gatatcctaa taagacttga gaaagaatat tctgaaaaat
     1621 atggcaaaga gttcagtgta acagataaac ctccaatcga tggagtactg tttggatatg
     1681 gcctcgattt atcacgatgt attggatgta gaagatgtgt atatgcttgt gtagaggaaa
     1741 ataatcaatc tcgtgaccct caagttcatt ggatacaggt acttcagatg gaaaatcaaa
     1801 aaggtatcga cctagctcat gcagatattc attataatcc tgaggtggtt cctgaagaag
     1861 gacattttta tatgccagtt gcttgtcaac aatgcagaaa tccacagtgt acaacggttt
     1921 gccccacaaa ggccacttgg caagaagaag atggaattgt tgtagttgat tataattggt
     1981 gcattggttg tagatattgc atggcggctt gcccatatgg tgcaagacat ttcaactggg
     2041 gcgaaccata tatacctgat gaagaagtta atcctataac atcatatcta ggtaacaggc
     2101 cacgaatgaa gggagttgtt gaaaaatgca ctttttgtat ccaacgggta agagacggta
     2161 aatacccctc ttgtgttgaa atttgtccta caggagcacg aaaatttgga aacttattag
     2221 accctgatag tgaaataaga tatatactag aaaataaaag ggtgcttatt tttaaagaag
     2281 agcttaacac tcaacctaaa ttctattatt ttttcggtgt atagttttat gctttttaat
     2341 atttgataca tttaaaatag ttaaatatga gttttttacg gtttatagtt ggaagtttta
     2401 ggatcattac caaaggtgga agagtatatt actcctgctt attttttcta ttcgttttaa
     2461 ttgtatgggg agcatttggg tattataatc aattgcaaga gggtttaatt gtaacaaata
     2521 tgagagactc tgtttcctgg gccttctata ttggaaattt taccttttta gttggtgttg
     2581 ctgctgcagc tgttgtgtta gttattcctg catatatata caattgggga ccaattaagg
     2641 aaattgtgat ttttggtgaa atactagcta tttgtgctgt tattatgtgc ttattattta
     2701 taatggttga tattggtgat ccattacgtt tttggcatat ggttccggtt attggaacaa
     2761 tgaattttcc gtcatctatt ttatcttggg acttctttgc tctattagca tatttcgtat
     2821 taaatcttat tatagttaca catttattat ttagacaatt tcataataag gaatataata
     2881 aatccttgat ctggccatta gtattgttaa gtattcctgc tgcaattgca attcatactg
     2941 tgacagcatt tctttttaat gcactacctg ctcgacctta ttggaatagt gctttacttg
     3001 cacctagatt tttagctacg gctttttgtt cagggccggc attgttaata ctaatatttc
     3061 aagttctaag aaaaactaca aaatttgaga ttaaagatga agcaatattt acaattgcag
     3121 aattaatggt ttatgcaatg tttatatata ttttctttac tgtctcagaa ttatttaaag
     3181 aattttactc agacactgaa cacattgttt attgggaata tttattgtta ggagtggaga
     3241 aaaacagaga gattgccata tacggttggt cttctttttt catggcttta acggcatttc
     3301 ttcttttttt aatccccaaa acccgaaaaa acttccttac attaaatata ggagcagtac
     3361 ttatttattt tagtgtttat ttggaaaaag gaataacctt gattgtaccc ggatttactc
     3421 ctgatgctct agggcaatat tacttttatg ttccttctga tgttgaagtg cgcactgctg
     3481 taatg
//
LOCUS       DASCQP010000241         2243 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000909979, whole genome shotgun sequence.
ACCESSION   DASCQP010000241 DASCQP010000000
VERSION     DASCQP010000241.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2243)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2243)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2243
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000909979"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..382)
                     /locus_tag="QF480_04045"
     CDS             complement(<1..382)
                     /locus_tag="QF480_04045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05765.1"
                     /translation="MKTRYIIIAITLFAFALNSCDKVSPPFIETKDYCNGNKKILIED
                     YTGHGCVNCPAAAVLAHDLKEQFCNRVVILGVHAGFFAKPNFDNNPLFAADFTTPAGN
                     TWDTFFGNSIMGNPNGLIVRVKGTT"
     gene            complement(393..2063)
                     /locus_tag="QF480_04050"
     CDS             complement(393..2063)
                     /locus_tag="QF480_04050"
                     /inference="COORDINATES: protein motif:HMM:NF039629.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6029 family protein"
                     /protein_id="HJN05766.1"
                     /translation="MKKLVTILIFALSLTTTVTAQGFLGKSEVHGSFEADGMYYHADK
                     DLGITDSLINGNIFGFNGFADIIYTLGDFSAGFRYEAYLPPIAGFDPSLDGQGFPYLW
                     ASYTTEKFSFTVGNFYEQFGNGLVLRTYQEWTLGYDNSINGIRIIYEPTKGIILKGVY
                     GTQRYFWAKYAKNGRGVIKGFDGEININDVFGSLSDSKIKLILGGSAVSKYQSDQNPF
                     YKLPQNVGAFAGRFNLGIGRFVFTSEYAHIINDPSAVNNYIYKPGNGLTFAGSYSTKG
                     LGIFAMFKRNDNMSYKSDEAVTSNALDINFLPPLIEAHTYMLASMYPYATQPNGEIGF
                     QFEIIYSVPKKSKLGGKYGMSININYSQMNDIARERVNDTSFIGESGTMGWKSDFFKF
                     GKQIFNRDLTIEIDKKFNRRFKSIFKYIYQDYDISTILGHTGDPNVKANIGIVDMTWK
                     FTSKKAIRWELQGLWTKQDKGNWAAALIEYTVSPHWFFSIADQYNYGNDHTSERIHYY
                     TGSFGYTLRTTRLSLTYGRQREGVVCVGGVCRQVPASSGFYLTVSSSF"
BASE COUNT          721 a          456 c          338 g          728 t
ORIGIN      
        1 cggttgttcc tttaaccctg acaattaatc cattaggatt acccataatg ctatttccga
       61 aaaaagtatc ccatgtatta ccagctggag ttgtaaaatc tgctgcaaac aatggattat
      121 tatcaaagtt tggtttagca aaaaaacctg catgtacacc aagaattaca acacgattac
      181 aaaattgttc tttcaaatca tgtgcaagta cagctgctgc tggacagtta acacagccgt
      241 gccctgtata atcttcgata agtatctttt tatttccatt acagtaatcc tttgtttcaa
      301 taaaaggagg tgagacttta tcgcaagaat ttaatgcaaa ggcaaaaaga gttattgcaa
      361 taattatata tctggttttc ataattttaa tattagaaac tacttgatac cgttaaataa
      421 aatccacttg aagcaggaac ctgacgacaa acgcctccta cacacacaac cccttcacgc
      481 tgtcgcccat atgtaagcga aaggcgagtt gttctcaagg tatatccgaa ggagccagta
      541 taataatgaa ttctttcgct agtatgatca ttgccgtagt tgtattgatc agcaatcgag
      601 aaaaaccaat gaggagatac cgtatattca atcaatgcag ctgcccagtt acctttgtcc
      661 tgttttgtcc ataaaccttg taattcccat ctaattgctt ttttagaagt gaatttccag
      721 gtcatatcca caataccaat atttgccttt acgttagggt ctccggtatg accaagaatt
      781 gtagatatat catagtcctg ataaatgtat ttgaaaatac ttttgaatct tctgttaaat
      841 ttcttatcaa tctcaatagt aaggtcgcgg ttaaagattt gcttgccaaa cttaaaaaaa
      901 tcagatttcc agcccatcgt accactttct ccgataaaag aagtgtcatt taccctttca
      961 cgagcaatgt cgttcatttg tgaataattt atattaatgc tcatgccata tttaccaccc
     1021 aacttacttt ttttaggtac actataaatt atttcaaatt ggaaaccaat ctcaccattt
     1081 ggttgggttg cataagggta catagaagca agcatataag tatgagcctc tatcagcgga
     1141 ggtaagaaat taatgtctag cgcatttgaa gttactgcct catccgactt ataactcatg
     1201 ttatcattac gcttgaacat agcaaaaata cccaatcctt tagtagaata tgaccctgca
     1261 aaagtcaatc cattaccagg tttataaatg taattgttta ctgctgaagg atcgttaatt
     1321 atatgagcat attctgatgt gaacacaaat cttccaattc ctagattaaa tcttcccgca
     1381 aaagcaccta cattttgagg tagtttataa aacggatttt gatctgactg atatttgctt
     1441 acagcactac ctccaaggat taatttaatc tttgaatctg acaaagagcc aaaaacatca
     1501 ttaatattta tttctccatc aaatccttta attactcccc tgccgttttt cgcatattta
     1561 gcccaaaaat atctttgtgt accatataca cctttaagta ttatcccttt tgtgggttca
     1621 taaattattc gtattccatt tatcgaatta tcgtaaccta gtgtccactc ttggtaggtt
     1681 ctaagaacga gtccatttcc aaactgctca taaaaattac ctacagtaaa actaaatttt
     1741 tcggttgtgt aggacgccca taaatatgga aaaccttgcc catctaaact tggatcaaat
     1801 ccagcaatag gaggtaaata tgcttcatat ctaaaccctg cagaaaagtc acctagggta
     1861 tagataatat cagcaaaacc gttgaagcca aatatgttcc cgttaattaa cgaatctgtt
     1921 atcccaagat ctttatcagc gtgataatac ataccatcag cttcaaaact gccatgcacc
     1981 tccgatttgc ctaaaaagcc ctgtgccgtg acagttgttg tcaatgatag agcaaatatt
     2041 aaaattgtaa ctaatttttt catttatagc ttttcaataa ttgattctat tttgtaccag
     2101 attcatattc acctgctgcc actttctcga caatctcaaa tatttcgtct tccagtcctt
     2161 cataatacga agtgtgctga taaacgatat ttccttcacc atcaaggata aatgtgtgag
     2221 gtatcatatt aacactcata gct
//
LOCUS       DASCQP010000242         1897 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000913880, whole genome shotgun sequence.
ACCESSION   DASCQP010000242 DASCQP010000000
VERSION     DASCQP010000242.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1897)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1897)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1897
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000913880"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..929)
                     /locus_tag="QF480_04055"
     CDS             complement(<1..929)
                     /locus_tag="QF480_04055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05767.1"
                     /translation="MKRKNLPLSLALISIVLGGIIFGFSNSQSESKYIPRSSDNESLV
                     YGIKPSVEYIALIRNNQTTGVIAPEYLNRVQDQLKDFEESRSFVNLTWRQLGPDNFGG
                     RTRAIMFDNQDATAKTLYAAGVSGGIWKSENVGISWQKINSESYNLNVTCMQQDAGGT
                     IYAGTGESFAAETMSGLEEMGFTGGFMGQGIFKSTDGNNFTLIPSTQPQFNDANSDWA
                     FINELAVNLNSGSLFAATNSGLKYSTDGGNSWSVAKDTSGAELVMNSFDVQVSSDGAI
                     VACIDNSCYISTSGDVDAFVNRSTGDSVSLPSE"
     gene            complement(1172..1283)
                     /gene="rrf"
                     /locus_tag="QF480_04060"
     rRNA            complement(1172..1283)
                     /gene="rrf"
                     /locus_tag="QF480_04060"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            complement(1503..>1897)
                     /locus_tag="QF480_04065"
     rRNA            complement(1503..>1897)
                     /locus_tag="QF480_04065"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          579 a          406 c          321 g          591 t
ORIGIN      
        1 tcttccgaag gtaaacttac tgaatcacca gttgacctgt taacaaaggc atcaacatct
       61 ccagatgtcg aaatatagca agagttgtca atacaggcaa caatagctcc atcagaagaa
      121 acctgtacgt caaacgaatt cataaccaat tcagccccag acgtatcttt tgcaactgac
      181 caggaattac caccatcggt tgagtatttt aatcctgaat ttgtggctgc gaataaactt
      241 ccactattta ggtttactgc gagttcatta ataaatgccc aatcgctatt agcatcattg
      301 aattgaggct gagtagatgg gataagtgta aaattgttac catcagttga tttaaagata
      361 ccttgtccca taaaacctcc agtaaagccc atttcttcaa gtcctgacat tgtttccgct
      421 gcaaagcttt ctcctgttcc tgcataaata gtaccgccag cgtcttgctg catacatgtt
      481 acatttaagt tgtaactttc actatttatt ttttgccagc taattccaac attctctgat
      541 ttccaaatac cacccgaaac accagctgca taaagagttt ttgccgttgc atcctggttg
      601 tcgaacataa ttgctcttgt tctacctcca aaattatcag gacctaattg tctccatgtc
      661 aagttaacaa aagaccgaga ttcttcaaaa tcttttaatt gatcttgtac cctgtttaga
      721 tattccggtg caattacacc agtggtttgg ttattacgaa ttaaagcaat atactccact
      781 gagggcttaa ttccatatac caacgattca ttatcgcttg atcgaggtat gtattttgat
      841 tcactctgac tgtttgaaaa gccaaagatt attcctccta atactatgga tatcaatgct
      901 aaacttaaag gtaaattttt tcgtttcatg ctttataact ttataatgct aattattatg
      961 aattcacatt ttagaacgca caatttacag cttttcttta aaatgaaata atattattaa
     1021 aaaaaataat aaacaagtaa ttaattatgc ctctaaactg taactctatt gacaaattta
     1081 cactagcata aggttgcaaa tatgatgtaa aagtgagtat atgggcaata aaaaagcccc
     1141 atacagaaga gtacggggct ttaaataaaa tctttggcga tgacctactt ttccacctgg
     1201 tatggcagta tcattggcgc tggcaggctt aacttctctg ttcggaatgg gaagaggtgg
     1261 accttgccgc tataatcacc caaaggtctt tgagaatttt aaatgttaaa tgttgaatgt
     1321 tgaattttga attttatccc gataattatc aggatcatat ctaacattca ctctcgttta
     1381 tattttattg atttatgttg cttttagtct tccgacttct agcttctgac ttatccataa
     1441 atcaatgaca aatgaaagaa aagtaaaata atatcttgcc catgaaaaga gacctatttg
     1501 agattaaaaa gtatacgggt aattagtact gctcggcttt gatgttacca tctttacacc
     1561 tgcagcctat caacgtcata gtctataacg acccttaaag gaagcctcat cttgaggtaa
     1621 gtttcgtgct tagatgcttt cagcacttat ctcatccaaa catagctacc ctgcgatgct
     1681 actggcgtaa caacaggtac actagaggtt tgtccaactc ggtcctctcg tactagagtc
     1741 aggtcctctc aagcttccaa cgcccacaac agatagggac cgaactgtct cgcgacgttc
     1801 tgaacccagc tcgcgtgcca ctttaatggg cgaacagccc aacccttggg accttctcca
     1861 gccccaggat gtgacgagcc gacatcgagg tgccaaa
//
LOCUS       DASCQP010000243         3908 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000914126, whole genome shotgun sequence.
ACCESSION   DASCQP010000243 DASCQP010000000
VERSION     DASCQP010000243.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3908)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3908)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3908
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000914126"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..958
                     /gene="rny"
                     /locus_tag="QF480_04070"
     CDS             <1..958
                     /gene="rny"
                     /locus_tag="QF480_04070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005790424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004521 - RNA endonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ribonuclease Y"
                     /protein_id="HJN05768.1"
                     /translation="AEHAIENTVTVFNIESDEIKGRIIGREGRNIRALEAMTGIEIII
                     DDSPDAILLSGFDPIRREIARLSLQKLVTDGRIHPARIEEIVAKTRKEVEQEILEVGK
                     RTVIDLGIHNMHNELIKLVGRMKYRSSYGQNLLAHSKEVANLSATMASELGLNPKKAK
                     RAGLLHDIGKIAENEAELPHAILGMKLAEKFKEKPDVCNAIGAHHDEIEMDNLISPIV
                     QVCDAISGARPGARREVVEAYIQRLKKLEGLALTYPGVVKTYAIQAGRELRVIVGAEQ
                     VSDEDADKISYELSRKIQEEMTYPGQIKITVIRETRAINYAK"
     gene            990..1484
                     /locus_tag="QF480_04075"
     CDS             990..1484
                     /locus_tag="QF480_04075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05769.1"
                     /translation="MKRIALFLFVSIFAFSIQAQHVFNAGSVKFNAGVGVPQINGFIP
                     TVNISGEVGVIPTGEVGLVSFGGLAEFHLADDGKTFPRFYVGPRAAWHVHAFNSTVFD
                     VYAGAGFGIVLNGEGKFNNSSINTQADIFVGGRWMYSPSTGLFVELGFTGLSNARFGF
                     TFGF"
     gene            complement(1549..2091)
                     /locus_tag="QF480_04080"
     CDS             complement(1549..2091)
                     /locus_tag="QF480_04080"
                     /inference="COORDINATES: protein motif:HMM:NF024572.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HJN05770.1"
                     /translation="MFKIAISLIITSVILCACNSGEKNNTVKISDINKLETELFSSNI
                     TAPDLVKAQQLADMYVVYADQHPDDSLAPEFLFKAADINMNVGNPNVTIGIFNRIISN
                     YPDYRNMSTVLFLVGFVYEDQLNDYPNAKKCYLEFLDRFPESDFADDAVVSLNNLGKS
                     PEELIREFEMKNKEDQESIN"
     gene            complement(2123..2695)
                     /gene="def"
                     /locus_tag="QF480_04085"
     CDS             complement(2123..2695)
                     /gene="def"
                     /locus_tag="QF480_04085"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018338283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042586 - peptide deformylase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HJN05771.1"
                     /translation="MILPITAYGHQTLKKVGEDITKDYENLDTLIENMFETMYFSKGI
                     GLAAQQINRAIRLFVIDPTPYSDDYPELKDFKKVFINARITNDEGEEVDFEEGCLSIP
                     GINEKVKRKSVIYLSYYDEEFNFHENVRFEGLLSRVIQHEYDHNEGKLFIERLPNFKK
                     LLLKGKLRDISTGNVDVAYKMILPRKKSRK"
     gene            complement(2714..3127)
                     /gene="ruvX"
                     /locus_tag="QF480_04090"
     CDS             complement(2714..3127)
                     /gene="ruvX"
                     /locus_tag="QF480_04090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005677892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HJN05772.1"
                     /translation="MGRILAIDYGQKRIGLAATDEMQLISTGLTTVHVKDIWNFLDDY
                     LTNEEVESIVVGEPKDLMNRPSESIKYIEPFVKQLTKKYPHIPIVRFDERFTSKMAHD
                     TMLISGLSKSKRQDKSLVNTISATLILQSYMNSIS"
     gene            3217..>3908
                     /locus_tag="QF480_04095"
     CDS             3217..>3908
                     /locus_tag="QF480_04095"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004328486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HJN05773.1"
                     /translation="MRNLTEIIESSWKDRSKLANPEVIEAVEEVIELLDKGKLRVAQQ
                     LDGSWKTNDWVKKAIILYFIIRKMETSEIGMFEFHDKIPLKHNYSDLDVRVVPHAVAR
                     YGSYLSPGVILMPSYVNIGAYVDRGTMVDTWATVGSCAQIGRNVHLSGGVGIGGVLEP
                     IQASPVIIEDNCFIGSRSIIVEGVHISEEAVLGANVTITKSTRIIDVSKTKPIEYKGI
                     VPPRSVVIPGSFA"
BASE COUNT         1223 a          647 c          758 g         1280 t
ORIGIN      
        1 cgccgagcat gcgattgaga atactgttac agtattcaat atagaaagcg atgaaataaa
       61 aggtcgtata attggacgag aaggcagaaa cattagggcg cttgaggcaa tgaccgggat
      121 tgagataatt attgatgaca gtccggatgc aatactactc tctggctttg atccaatacg
      181 tcgtgaaatt gcaagactat ccctacaaaa acttgttacc gatggtagaa ttcaccctgc
      241 acgtattgag gagattgttg ctaaaacacg taaagaggtt gagcaagaga tacttgaagt
      301 aggaaaaaga actgtaatag acctaggcat tcataatatg cacaacgaat taataaagct
      361 tgtaggtcgc atgaaatacc gatcatctta tgggcaaaat ctgttagccc actccaaaga
      421 agttgcaaac cttagtgcta caatggcatc agaacttggt ctaaatccaa aaaaagcaaa
      481 gcgcgccgga ttattgcatg atattggtaa aatagccgaa aatgaagctg aattacctca
      541 tgctattttg ggaatgaagc ttgcggagaa gtttaaagag aaacctgacg tatgtaatgc
      601 aattggtgcc caccacgatg aaattgaaat ggacaactta atctcaccaa ttgtgcaggt
      661 atgtgatgca atttctggtg cccgacctgg tgctcgtcgt gaagtggtag aagcctacat
      721 acaacgtctt aaaaagctgg aaggacttgc tctaacttat ccaggtgttg taaaaaccta
      781 tgctattcag gcaggtcgcg aactgagagt gattgttgga gcagaacagg taagtgacga
      841 agatgccgat aaaatttcat atgaattgtc taggaagata caagaggaaa tgacttatcc
      901 cggacaaata aagataacag taattcgcga gacaagagct atcaattatg ccaaataggt
      961 ttcttgatat taaaatctaa ttaacaatta tgaaacgtat agcattattt ctatttgtat
     1021 cgatttttgc ttttagtata caagctcagc acgtttttaa tgcaggaagc gtaaaattca
     1081 atgctggagt tggagttcct caaattaatg gttttatacc tactgtgaat ataagtgggg
     1141 aagtaggagt gattccaact ggagaagttg ggttggtatc ttttggtggg ttggctgagt
     1201 tccaccttgc cgatgacgga aaaacctttc cgcgttttta tgtgggaccc agagcagcct
     1261 ggcatgttca cgcctttaat agtaccgtgt ttgatgtata tgctggcgct ggttttggta
     1321 ttgttttaaa tggagagggt aaatttaata atagcagtat taatactcag gccgatatct
     1381 ttgttggtgg aagatggatg tattcgccta gtacagggct atttgtagag cttgggttta
     1441 caggactgag taatgctagg tttggtttta cttttggatt ttaacaacaa ctgtacttac
     1501 cgatttaccc aatcaataca caaatcaaaa gttttaataa taataggttt aattgattga
     1561 ttcttgatct tctttatttt tcatttcaaa ctctctgatc aattcttcag gagattttcc
     1621 tagattattt agcgaaacaa cagcatcatc agcgaaatca ctttccggaa aacggtccaa
     1681 aaactccaga taacatttct ttgcatttgg gtaatcatta agttgatctt catatacaaa
     1741 tcctactaaa aacaaaactg ttgacatatt tctgtaatca ggataatttg aaattatcct
     1801 attaaatatt ccaattgtga catttggatt cccgacattc atattaatat cggcagcctt
     1861 aaatagaaac tcgggagcca atgaatcatc agggtgttgg tcggcataaa caacatacat
     1921 atcagctagt tgctgtgctt taactaaatc aggtgcagtt atattagagc taaaaagctc
     1981 ggtttcaagt ttatttatat cactgatttt tacagtatta tttttctcgc cactattgca
     2041 agcgcataga attactgatg tgataattaa agatattgca attttaaaca tagttgtaag
     2101 ctttattatt tggtttctac tattattttc tacttttctt tcttggtaat atcattttat
     2161 aagctacatc aacatttccg gtactgatat cgcgtaattt acctttgagc aataatttct
     2221 tgaaatttgg taaacgttca ataaataact taccctcatt atggtcgtac tcatgctgta
     2281 taacacgaga taacaaacct tcaaatctta cattttcatg aaaattaaat tcctcatcat
     2341 aataagataa gtaaataacc gatttccttt ttaccttttc atttatacca ggaatactaa
     2401 ggcacccttc ctcaaaatca acctcttcac cttcatcatt ggtgatacgg gcgttaataa
     2461 atactttttt aaaatccttg agctcaggat aatcatcgct ataaggtgtt gggtcaataa
     2521 caaataatct aattgccctg ttaatttgtt gtgctgcaag gcctataccc tttgaaaaat
     2581 acatagtttc aaacatgttt tcaattaagg tgtctagatt ctcatagtcc ttggttatat
     2641 cctcacctac ttttttaagt gtttgatgac catatgctgt tataggtagt atcatttaac
     2701 ttttttctgg taattagctt atcgaattca tgtacgattg aagtatcaaa gtggcactta
     2761 tagtatttac gagtgacttg tcttgccgtt tgcttttact taatccacta atgagcattg
     2821 tgtcgtgtgc catttttgaa gtaaatcgtt catcaaatct tactataggg atatgtggat
     2881 atttttttgt tagttgtttt acaaaaggct caatgtattt tatggattcg gaaggtctat
     2941 tcataaggtc tttaggctca cccactacta tgctttcaac ctcttcattt gttaaataat
     3001 catcgaggaa attccaaata tccttaacat gaacagtggt aagacctgta gagatgagtt
     3061 gcatttcatc tgttgctgcc aaaccaattc ttttctgtcc ataatctatc gctaagatcc
     3121 ttcccattta ctaattagtt tctattcttt gattacaaaa gtttaaggcg gcaaaattag
     3181 cattttttta tacttttatc gtaaatttta atttcaatga gaaaccttac agaaattata
     3241 gaatctagtt ggaaagatag gagtaagctt gctaatcccg aagtaattga agctgtggaa
     3301 gaagtgattg aattgttgga taagggcaag ttaagggtcg ctcaacagct tgatggaagc
     3361 tggaaaacta atgattgggt aaaaaaagct ataatattat actttataat tcgtaaaatg
     3421 gaaacctcgg aaattggaat gtttgaattt cacgataaga ttccattgaa gcacaattat
     3481 agtgatcttg atgtacgggt tgttccacac gccgtcgctc gttacggatc atatctttca
     3541 ccaggtgtaa tattaatgcc ttcttatgta aatattggtg cttatgttga tagaggaact
     3601 atggttgata catgggctac cgtaggatca tgtgctcaaa ttggaagaaa tgttcatttg
     3661 agtggtggag ttggtattgg aggcgtacta gaaccgattc aggcatctcc tgttataatt
     3721 gaagataatt gttttatagg atcacgatct attattgttg aaggtgttca tattagtgaa
     3781 gaagcagtac ttggcgcgaa cgttacaata accaaatcaa ccagaataat tgatgtaagt
     3841 aaaactaaac ctatagagta taaggggata gtgccaccaa gatcagtggt tatacccggc
     3901 agttttgc
//
LOCUS       DASCQP010000244         5376 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000918635, whole genome shotgun sequence.
ACCESSION   DASCQP010000244 DASCQP010000000
VERSION     DASCQP010000244.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 5376)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5376)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5376
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000918635"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..215
                     /locus_tag="QF480_04100"
     CDS             <1..215
                     /locus_tag="QF480_04100"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN05774.1"
                     /translation="NPTDGLLHIELQVNISIATITLIDFSGREVLARRFNTNKVEISL
                     PETNGIYLLIVESENGSIYMKRIVKQ"
     gene            complement(270..1733)
                     /locus_tag="QF480_04105"
     CDS             complement(270..1733)
                     /locus_tag="QF480_04105"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN05775.1"
                     /translation="MKTIFILLFSVLFFCKFSFTQTNPGLSFGGTNNDCGYSLCLTND
                     QGYLLAGTTRSYGKGSEDLYLIKLNEFGHLNWSETYGGSHQDFVRSIIPSDDAYILIG
                     DQWIDFSKRTDIKMIKINSVGERIWEISFGTNNDEKGFKVLETSYGNLIILGYSRGFD
                     DPGDIFIIKTDAEGNQLWQNHYGYEMDDYGLDIVENDDGSLMIFGTKNGFFNDVHVNF
                     RVPDADMFLLKIDENGNELWRQEYGAEGHDFGYALNKSVSGGYFLFGSTQSYGAGSFD
                     MCLIKIDENGSLIWQKTYGGEHYEYGLSIDNNESGDLFLLGCTKSFGENGSVDYYLIK
                     TDSLGNPIWELTIGGDMADNGNKVLATIEGGCVVIGSSESFGSGGSDMLVAKVNQYGM
                     IENLYDDINSKYSNQLVIAPNPIHQTGRIILDDNNPSTSKVLELTSANGVFVKQYILT
                     LPNFTFDVSGLPAGIYVYKLSDTNKTTNEYRGKLIVY"
     gene            2099..2818
                     /locus_tag="QF480_04110"
     CDS             2099..2818
                     /locus_tag="QF480_04110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013612660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HJN05776.1"
                     /translation="MPKKLSILIPAFNEANTILQILDKVLDVKLKDKVEKELLIVDDC
                     STDSSISVIKEYIANHKDISIKLFEQPTNMGKGAAIHRGIKESTGDFIIIQDADLEYD
                     PNEYNKLLKPVLDDFADVVYGSRFMGGNPHRILFFWHSLGNKFLTFLSNMFTNLNLTD
                     METCYKLFRADILKSIPLKEQRFGFEPEVTAKISRVPNIRIYEVGISYYGRTYTDGKK
                     IGWEDGLRAIYCVLKYNLLSR"
     gene            2852..4300
                     /locus_tag="QF480_04115"
     CDS             2852..4300
                     /locus_tag="QF480_04115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05777.1"
                     /translation="MKVQNNKFTIYAFLALSFFAGIILILTTQNSFGGGDSIQHYSMA
                     HWGWKYPKLLFDHWGKPIFTILISPFAQIGINGARIYNLLLGFGTAIVIWQIAQILKF
                     KNSTISIFFVLFTPIYFILIFTPLTEVSFSFFLALSILVFFKKKYYLSAIILSFLPLI
                     RTEGIVLLPLFILAYFFRKKILAIPLLLSGFLIISLAGYSYYDDFWWLITKMPYSGDA
                     IDIYGSGSLFRFINDTRGILGYLLGVLFIIGLIFSLIQWVQKDKFKFSNTFYFLLLVP
                     GSYIVFLSAHSFAWWLGVGNSLGLIRVIGSVTPLAALTALLGFNLIIDLLNRKNKFIG
                     KIITYGIIIWIIAFGIGTHRGGFKLSDNQVLIQQTTTFLKNNNLIKHKLYYFDPFVVY
                     ELSIDPYDVTKCSWGIPNVEKASLGIPDSSIIIWDAHFGPNEGRVALASLQKQKSLST
                     VKIFKPKKPTIVLGGYNYEVHVFMKDKSLTKN"
     gene            4625..>5376
                     /locus_tag="QF480_04120"
     CDS             4625..>5376
                     /locus_tag="QF480_04120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018695125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase dimerization
                     domain-containing protein"
                     /protein_id="HJN05778.1"
                     /translation="MSNIYEQKVNDFMAKVIAKNPSEVEFHQAVHEVVESIIPFIEEN
                     PQYQDAKVLERMVEPERVIMFRVPWLDDKGEVQVNRGFRIEMNSAIGPYKGGLRFHPT
                     VNLGVLKFLAFEQVFKNSLTTLPMGGGKGGSDFDPKGKSDNEVMRFTQSFMSELFRHI
                     GPNTDVPAGDIGVGGREIGFMFGQYKRLRNEFTGVLTGKGIEWGGSLIRPEATGYGTV
                     YFAEEMLKTRGDSMKGKVCTVSGSGNVAQYAT"
BASE COUNT         1813 a          904 c          889 g         1770 t
ORIGIN      
        1 caaacccaac ggatggacta ttacatatag aattacaagt taatattagc atagcaacaa
       61 ttactttaat agatttctca ggcagagagg tattagctag gcgatttaat acaaataaag
      121 tggaaattag tctacctgaa actaatggaa tttatttatt aatagttgaa agtgagaatg
      181 gtagtattta catgaaaaga atcgtaaagc agtaacacga ttttcccaca actaaaaaca
      241 gtatcaaacc tagggttcac tcgatttgtt taataaacta ttagtttacc tctatattca
      301 ttagtagttt tgttagtatc tgataatttg tacacataaa taccagcagg taaacctgaa
      361 acatcaaatg tgaaatttgg taatgttaaa atgtattgtt taacaaaaac accattagcg
      421 gaagtaagtt caagcacttt ggaagtactg ggattattgt catctaatat tatccgtcct
      481 gtttgatgaa tggggtttgg tgcaattacc aactggttac tatatttgga attaatatca
      541 tcatacaggt tttcaatcat tccatattga ttcacttttg caacaagcat atctgaacca
      601 ccggaaccaa aactctctga actaccaata acaacacaac cgccttcaat agttgcaagt
      661 actttattgc cattatctgc catatcccca cctatagtga gttcccaaat aggattaccg
      721 agtgaatctg tcttgataag gtaatagtct acacttccgt tttcaccaaa gcttttagtg
      781 caaccgagaa ggaataaatc accgctctca ttattgtcaa tggataatcc atattcgtaa
      841 tgttcacctc cataagtttt ttgccatatt aatgagccat tttcatctat tttaataaga
      901 cacatatcaa agctgcctgc gccataactt tgagttgatc caaataggaa ataaccacct
      961 gaaactgatt tatttaaggc atatccaaaa tcgtgaccct ctgcaccata ttcctgacgc
     1021 caaagttcat taccattttc atctatttta agtagaaaca tgtcggcatc aggtactcga
     1081 aaattaacat gtacatcatt aaaaaatcca tttttagttc cgaaaatcat taaacttccg
     1141 tcatcatttt caacaatgtc caaaccataa tcatccattt catacccata gtggttttgc
     1201 caaagttggt ttccttcagc atctgttttt ataataaaga tgtcaccggg atcatcaaat
     1261 ccgcggctat atccaagtat tatcagattt ccgtaagaag tttccaatac tttaaaaccc
     1321 ttttcatcat tattagtgcc aaatgaaatt tcccagatgc gctcaccaac actattaatt
     1381 ttaatcattt taatatcagt gcgtttacta aaatcaatcc attggtcacc aataaggata
     1441 taagcatcat cagatggaat aattgaacgt acaaaatcct gatggctgcc tccataagtt
     1501 tccgaccaat taagatgtcc aaattcatta agttttatca gatataaatc ttcacttccc
     1561 ttaccataac tacgagtagt tccggccaac aaatatcctt gatcatttgt caggcataat
     1621 gaatatccac aatcgttatt agtacctcca aatgacaagc cagggttggt ttgtgtaaaa
     1681 ctaaatttgc agaaaaaaag cacagaaaac aaaagaataa atattgtttt catactattt
     1741 atgatttgaa ttcatcgtca ggacaatagt gaagaagatt cctcagttag atacgtaatg
     1801 aaaccgaaaa acaaatatac gtatattgga tgagcattgg ttattgctaa atatatgaaa
     1861 aaatattttc agtagaaaga agatgatctg tgaggcttaa tgataaataa atgagtaata
     1921 tatttctaat tagcttctcg aaccgtccaa atttatcaaa tatttgtatt tattaacatt
     1981 aattgaattt aatacatttg caaaacatat ctatttcctg attaatttta gcgcaacaaa
     2041 ataaatttag aattaaacta attatatata tattttcgcc gaacacaaaa tttaacaaat
     2101 gcccaaaaaa ctatcaatcc taattcctgc cttcaatgaa gcgaatacaa tcctacaaat
     2161 acttgacaaa gtattggacg taaaactaaa agataaagtg gagaaggaat tattgatagt
     2221 tgatgactgc tcaaccgata gctctatatc agttattaag gaatatattg ctaatcacaa
     2281 agatatatcc atcaaactat ttgagcaacc cacaaatatg gggaaaggag ctgctattca
     2341 tcgcggcatc aaggagtcta cgggtgattt tattattata caggacgccg atctggaata
     2401 tgatcctaat gaatacaaca aattactcaa accagtgtta gatgactttg cagatgttgt
     2461 ttatggttca agatttatgg gtggtaatcc tcataggata ctcttctttt ggcattcctt
     2521 aggtaacaaa ttccttacgt ttttatcaaa catgtttaca aatctgaacc ttacagatat
     2581 ggaaacttgc tataaacttt tcagggcaga tatccttaaa tcaatacctc tcaaagagca
     2641 acgttttggt tttgaaccag aagtaacagc aaaaatttca agggtaccca atattcgtat
     2701 ttatgaagta ggtatttcat attatggacg tacttatacc gatggcaaga agattggttg
     2761 ggaagatggg ctaagggcaa tttattgcgt ccttaaatat aatttgttat ccagataaca
     2821 tgaattaaac ttacaactcc tttataagtt tatgaaagtt caaaataata agtttacaat
     2881 ctatgctttc ttagcgctta gtttttttgc agggattatt cttatactta ctacccaaaa
     2941 cagttttgga ggaggtgatt cgatccagca ctacagtatg gcacattggg gttggaagta
     3001 ccccaaacta ctatttgatc actggggtaa accaatattc actattctaa tttcaccgtt
     3061 tgcacaaatc ggcattaacg gggctcgaat ttataatctg ttgttaggtt ttggaactgc
     3121 cattgtaata tggcagatcg cacaaatatt aaaattcaag aatagtacca ttagtatatt
     3181 ttttgtattg ttcacaccaa tttatttcat tttaatattt acgcctttaa ctgaggtgag
     3241 tttcagtttt tttcttgcat tatcaatact ggtcttcttc aaaaagaagt actatctttc
     3301 ggcaataata ttatccttct taccattaat tcgcacagaa ggtatagtgt tactaccatt
     3361 atttatttta gcttacttct tcagaaaaaa aattcttgca attccattac ttttgagtgg
     3421 atttttaata attagcctgg caggttattc ttactatgac gatttttggt ggcttattac
     3481 aaaaatgcct tactcgggag atgctataga catttacgga agtggttcac tttttcgttt
     3541 tattaatgat acaagaggaa tattgggata tcttttgggt gtcttgttta ttattggttt
     3601 aatattttca ttgatacaat gggtacaaaa agataaattt aaattttcaa atactttcta
     3661 ttttctatta cttgttcctg gttcttatat tgttttttta tcggcacatt cttttgcatg
     3721 gtggcttgga gttggtaatt ctcttggact cataagagtt atagggtcgg ttacaccatt
     3781 ggcagcttta acagctttac tcgggtttaa tttaattatt gacctattaa atagaaagaa
     3841 caagtttatt ggtaaaataa tcacttatgg aattattatt tggattattg cattcggaat
     3901 cggtactcac cgaggtggtt ttaaactgtc cgataatcag gtgctaatcc aacaaactac
     3961 gacatttctc aaaaacaata accttatcaa acataagcta tactattttg atccatttgt
     4021 tgtttacgag ttaagtattg atccatatga cgtaactaaa tgttcttggg gtattcctaa
     4081 tgtagagaaa gcttctttgg gaattcctga tagcagtata attatttggg atgcgcattt
     4141 tggccctaat gaaggaagag tcgctctagc atccttacaa aagcaaaaat cactaagtac
     4201 agttaaaata ttcaaaccta aaaaacctac tatagtatta ggaggatata actatgaggt
     4261 gcatgttttt atgaaagaca aaagtttaac gaagaattaa ttccttcagc tgaaatgaga
     4321 atgaaatatt tgattcaaaa caagagtttt aaaatttcgt aataacaatg ataactttga
     4381 caagttaatt taagcacaaa acctatcaac ctaatttagg tagtaacaat tgacaaacta
     4441 ccaattcgca ttcgcactct aacccctcct ctacgtgttt tacttaattt aatacgggat
     4501 accctcaatt agtatactta aaatgaaatt gcggtgttat aatgactaat attgacaaat
     4561 attattaaac actcgtagtg taatagtgtt gaagcaaaat tgtttaatca aaaacatata
     4621 aaagatgtcg aatatttatg aacaaaaggt aaatgacttt atggctaaag ttattgccaa
     4681 gaatccaagc gaagtagaat tccatcaggc agttcacgaa gttgttgaat caattattcc
     4741 tttcattgaa gaaaacccac aatatcagga tgcaaaagtt cttgagagaa tggtagaacc
     4801 agaaagagta attatgttcc gcgttccatg gttggacgac aaaggtgaag tacaggtaaa
     4861 ccgtggtttc cgtattgaaa tgaatagcgc tattggtcca tacaaaggtg gattacgctt
     4921 tcatccaact gtaaaccttg gtgttcttaa attccttgct tttgagcaag tatttaaaaa
     4981 ctcattaact acccttccaa tgggtggtgg taaaggtggt tctgattttg acccaaaagg
     5041 aaaatcagat aatgaagtga tgcgttttac tcaaagtttt atgagtgaac ttttccgtca
     5101 tattggtcct aacacagacg ttcctgccgg tgatattggc gtgggtggtc gtgaaattgg
     5161 attcatgttt ggacaatata aaagattaag aaatgagttc acaggtgttc ttaccggtaa
     5221 aggaatagaa tggggtggat cattaattcg tcctgaagca acaggttatg gtaccgtata
     5281 ttttgcagaa gaaatgctca aaacccgtgg tgatagcatg aaaggtaaag tttgtacagt
     5341 ttctggctca ggtaatgttg cacaatatgc aactga
//
LOCUS       DASCQP010000245         1504 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000924787, whole genome shotgun sequence.
ACCESSION   DASCQP010000245 DASCQP010000000
VERSION     DASCQP010000245.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1504)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1504)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1504
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000924787"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..251)
                     /locus_tag="QF480_04125"
     CDS             complement(<1..251)
                     /locus_tag="QF480_04125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4136 domain-containing protein"
                     /protein_id="HJN05779.1"
                     /translation="MRKLLIPIMLIFLVSCSSLKVTNNWDKSIDFKEFKNFSMYPWDK
                     QNDKLINEYDRQTITLEVISEMERRGYKHLEKGGELIVST"
     gene            436..894
                     /locus_tag="QF480_04130"
     CDS             436..894
                     /locus_tag="QF480_04130"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF012478.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HJN05780.1"
                     /translation="MMKRCFIVTISVILLSMIMFSCKKDSNQSEIDHGLIEAYVIKKQ
                     LDGQYTSSGLYYVIVDPGDNDHPTINSNVNVSYTGYSLEDVVFDEGNNITLGLYQVIA
                     GWQEGLQLIGEGGSIKLVIPSGLAYGSSGLGSIKPNEVIAFDVTLHYFIN"
     gene            935..1387
                     /locus_tag="QF480_04135"
     CDS             935..1387
                     /locus_tag="QF480_04135"
                     /inference="COORDINATES: protein motif:HMM:NF014668.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="regulatory protein RecX"
                     /protein_id="HJN05781.1"
                     /translation="MAPEHTFLLNKARKFCAYQERSIFDLKSKLLSWNVSEKIIAEII
                     LLLKKEDFINEERFTFAFATGKLRNNKWGKNKIGYALRQKQIPELTIQIALNSLDEDE
                     YIKTLKAILSSKNIDDDNDFRRNSKLVKYAQQKGFQPDLVWKVIKNEI"
BASE COUNT          540 a          217 c          248 g          499 t
ORIGIN      
        1 gttgaaacta tcaattcacc tcctttttct aaatgcttat atcccctacg ctccatctcg
       61 cttattacct ccaaagtaat agtttgcctg tcatactcat ttatgagttt atcattttgc
      121 ttgtcccaag gatacatgct aaagtttttg aactctttga aatcaatcga tttatcccag
      181 ttatttgtaa ccttaagaga gctacatgac actagaaata tcaacattat tggaattaat
      241 aattttctca ttgtaataaa tttaattagt tgcatttttc acaaagataa atcaatatac
      301 tgcaagacaa ttacagaaat tggtaaaata atttaacatc tagaatttta agtgcttttt
      361 tcctaactca aatattaaaa attgagttga cacgttctcc taaaaatgta aatttgcttc
      421 ttaaatttta aaattatgat gaagagatgt tttattgtta ctatttctgt catacttcta
      481 agtatgatca tgttttcctg caaaaaggat tcgaatcaat cggaaataga ccatggatta
      541 attgaagctt atgtgattaa aaaacaatta gatggacaat atacatctag tggattatac
      601 tatgttattg ttgatccagg agataatgat cacccaacaa ttaattctaa tgtcaatgtt
      661 tcatatacag gttattctct tgaagatgta gtatttgatg aaggaaataa tataactctt
      721 ggcctctacc aggtaatagc tggatggcag gaaggactac aattaattgg ggagggtggt
      781 agtataaaac ttgtaattcc ttctggattg gcatatgggt caagcggatt agggagtatt
      841 aagccaaatg aagtaattgc ttttgatgta acacttcatt atttcataaa ttagataatc
      901 gagatgttat tagtttctta ctaaaactta aattatggca cctgaacaca catttttgct
      961 aaacaaagca cgaaagtttt gtgcatatca ggaacgctca atttttgact tgaaatcaaa
     1021 attattaagc tggaatgtaa gtgaaaagat tatcgctgag attatcctcc tacttaaaaa
     1081 ggaagatttt attaatgagg agcgctttac atttgccttt gcaactggaa aattacgtaa
     1141 taacaaatgg ggaaagaaca aaattggtta cgctctccgg caaaagcaaa ttcctgaact
     1201 aacaatacaa attgcactta attcgctgga tgaggacgaa tatataaaaa cgttaaaagc
     1261 aatactgtca tccaaaaata ttgatgatga taatgacttc cgtcggaact ctaagttggt
     1321 aaaatatgcg caacaaaaag gttttcaacc tgatttagtg tggaaagtaa ttaagaatga
     1381 aatttaaaag gagtgatttg tttttaaaaa accttgaaat agctaaataa aatatttgaa
     1441 tcagaataat atgtttacaa cagaaggaag aaaagaactt ttcaagaggc ttgatgcttt
     1501 aagg
//
LOCUS       DASCQP010000246         3076 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000926849, whole genome shotgun sequence.
ACCESSION   DASCQP010000246 DASCQP010000000
VERSION     DASCQP010000246.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3076)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3076)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3076
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000926849"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..883
                     /locus_tag="QF480_04140"
     CDS             <1..883
                     /locus_tag="QF480_04140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013611082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="asparagine synthetase B"
                     /protein_id="HJN05782.1"
                     /translation="VTLALTYAEIPYDVVYDHEVMSGMLPTYDWLHLHHEDFTGQYGK
                     FWAHYRNYPWYREDVAVNEKIASELGFEKVSELKLAVTKKIRDFVLGGGYLFAMCSAT
                     DSYDVALAADNIDICDVMFDGDPMDASAQEKLDYDNCMVFKDFTIVRNPAKYEISNID
                     VTETRPRSIREGNDFFMLFDFSAKWDHIPTILCQNHQRLIKGFMGQTTAFNNDLIQSN
                     VVIMGENKAANEARYIHGEYGNGFWTFYGGHDPEDYQHRIGDPQTDLNLHPNSPGYRL
                     ILNNVLFPAAKKKKRKT"
     gene            895..1326
                     /locus_tag="QF480_04145"
     CDS             895..1326
                     /locus_tag="QF480_04145"
                     /inference="COORDINATES: protein motif:HMM:NF019310.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJN05783.1"
                     /translation="MQLNTSTTPSMSAMHSFYPIIVLTGFVQMIIPSTIHMLMNHFHL
                     KTGEVAILPLIYFTGMMIGALAITALIKRFSVKRLMISGAIIVSISLIAVSQSQLFFL
                     LVFLYIFIGFGNAIMVTLPGIYATNRYSEKSAQLQSMILVL"
     gene            1416..2099
                     /locus_tag="QF480_04150"
     CDS             1416..2099
                     /locus_tag="QF480_04150"
                     /inference="COORDINATES: protein motif:HMM:NF019310.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJN05784.1"
                     /translation="MIFPALIPIILTKHAPIDKAEQLNFRIIKEIIAFDKRFFLGLVI
                     AVVISSGSGSGFLTWLITFLEVQRETSVGVAHLILASMGIAAFFGRLIWSRVGPKITV
                     YRTLLLIVPISVALVFIAPLSKIVMMNIILFFIAMIFVSGVTPLLLSTATVYPKSHSS
                     SAYTILFIFMSLGGMLIPFGIGHVFQQEGPVIGMSSISLLFIIVIGMILLIRKEIQIK
                     KHQRKNPQP"
     gene            2215..>3076
                     /locus_tag="QF480_04155"
     CDS             2215..>3076
                     /locus_tag="QF480_04155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05785.1"
                     /translation="MIKIFRSTALLSLLMAALFPQAQTTSKMPLEIARAFQNGTRSND
                     GNPGPNYWQNSSNYTIKAELLTEDSKLVGSESIIYYNNSPDTLNRIVMRLYPDFYKKG
                     NTRSWSIGEDDLTDGTLINKLNINGKAIDINNRRKVRRSSTNMFISLEDKLVPGDSLQ
                     LDCNWEFNIPRKRWVRMGNYGNDRFFIAYWYPQIAVYDDIDGWDRIEYTGMVEYYNDF
                     NNYDVTISTPPGFTVWATGELENINELYSKKVIDNYNKAKKTEEVVNIFSISDLKNNK
                     VLKNSTSNKWH"
BASE COUNT          989 a          522 c          568 g          997 t
ORIGIN      
        1 tgttaccctt gctctcacat atgctgaaat tccatacgat gtggtttatg accatgaagt
       61 tatgagtgga atgttgccaa cttacgactg gttacacctt catcacgaag attttacagg
      121 tcaatatgga aaattctggg cacattatcg aaactatccc tggtacagag aagatgttgc
      181 tgtgaatgaa aagattgctt ctgaattagg ttttgagaaa gtttcagaac taaaactggc
      241 cgttacaaaa aagattcgtg attttgtatt agggggtggg tatttattcg cgatgtgctc
      301 agcaactgat agttacgatg ttgcacttgc cgctgataat attgatattt gtgacgtaat
      361 gttcgatggt gatccaatgg atgccagcgc tcaggaaaag ctagattacg acaattgtat
      421 ggtttttaaa gatttcacaa ttgttagaaa tcccgctaag tatgagatat caaatataga
      481 tgtaacagaa acaagaccaa gaagcatacg tgaaggaaat gactttttta tgctttttga
      541 tttttcagca aaatgggatc acattcctac tattctctgc caaaaccatc aacgtttgat
      601 taaaggcttt atgggacaaa caacagcatt taataatgat ctaatacaat caaatgttgt
      661 aattatgggt gaaaacaaag ctgctaacga agcgcgatat atacatggtg agtatggtaa
      721 cggattctgg acgttctacg gtggccatga tccagaagat tatcaacatc gtattggtga
      781 tcctcaaacc gatctaaacc tccatcctaa ctcacctggt tatcggctga ttctcaataa
      841 tgtattgttt ccagctgcaa agaagaagaa gaggaaaaca taggagaaca ctatatgcaa
      901 cttaatacat ccactacccc atcaatgagt gcaatgcatt cattctaccc gataattgtg
      961 ctgactggtt ttgttcaaat gatcattcca tcaactattc atatgttaat gaatcatttt
     1021 catctcaaaa caggtgaagt tgctatactt ccccttatct atttcacagg aatgatgatt
     1081 ggtgctttag ccataactgc tctaataaaa agatttagtg taaagcgcct tatgatttca
     1141 ggggcaatta ttgtttcgat atcactaata gctgtctctc aaagtcaatt gttcttctta
     1201 cttgtatttt tatatatttt catcggtttt ggaaatgcta ttatggttac tcttcctggt
     1261 atttatgcta ctaatcgtta tagtgagaaa agtgcacaac ttcaatcgat gattttagtt
     1321 ttatagcatt gggctttgta attggtcctg tttttccagg attaatatct tattttcatt
     1381 tgtcatggtg atggtgtttt gcgttacctg gactattgat atttcccgca ttgataccaa
     1441 taatacttac aaaacacgca ccgatagaca aagctgaaca attaaatttc cgtattatta
     1501 aagaaattat tgcatttgat aagagattct ttcttggtct ggtaattgcg gttgttattt
     1561 catcaggctc cggttctggt ttcctaacat ggctcattac gttccttgaa gtacaaagag
     1621 aaacatcagt tggagtagct catctaatac tggcatccat gggtatcgcc gcatttttcg
     1681 gcagattaat ttggtcaaga gtagggccaa aaattacagt ttatcgtact ttacttctta
     1741 ttgtaccgat ttctgtggcc cttgtattta tagcacctct gtccaaaata gtaatgatga
     1801 atattatact gttttttata gcaatgattt ttgtgtcggg agtaacccca ctattacttt
     1861 ctactgctac agtttatcct aaatcacatt cttcaagcgc atatacaata ttatttatct
     1921 ttatgtcatt aggaggaatg ttaataccat ttggcatcgg gcatgtattc caacaggaag
     1981 gacctgtaat agggatgagc tcaatttctt tgttattcat aatcgtaata ggcatgatac
     2041 ttcttatccg aaaagaaata cagattaaaa agcatcagcg taagaatcca caaccttaaa
     2101 aagttgtgaa attttgtatc acttgatgtg cttgtataat cgttattgaa attagaaatt
     2161 aaattctcac aattattcct atttttaccg caattattca aatagcactt gtaaatgatt
     2221 aagatattta gatcaaccgc attactttct ctgctgatgg cagcattgtt tccccaagct
     2281 caaacaacta gtaaaatgcc tcttgaaatt gcaagagcat tccagaatgg tacacgttcg
     2341 aacgatggaa acccgggacc aaattactgg caaaattcat ctaattacac aataaaggcg
     2401 gaacttttga cggaggacag caaactagta ggaagcgaat caataattta ctataacaat
     2461 agccctgata cactaaatag gattgttatg cgattatatc ccgattttta taaaaaggga
     2521 aatacacgct cttggtccat tggtgaagat gatttaactg atggtacatt gataaataaa
     2581 ttgaacatta atggcaaagc tattgatatt aacaatagaa gaaaagttag acgttcatca
     2641 accaacatgt ttatttctct tgaggacaag cttgttcctg gtgattcatt acaattagat
     2701 tgtaactggg aattcaacat tccacgtaag cggtgggtaa ggatgggaaa ctatggtaac
     2761 gacagattct ttattgctta ttggtatccg caaattgctg tatatgatga cattgatggg
     2821 tgggacagga tagagtatac tggaatggtt gaatattaca acgatttcaa taactatgat
     2881 gttacaataa gtacacctcc aggatttacg gtttgggcca caggtgagct tgaaaacata
     2941 aacgagttat actcaaaaaa agttatagat aattacaata aagccaaaaa gacagaagag
     3001 gttgtaaata tattctcaat atctgaccta aaaaacaata aggttcttaa aaatagtaca
     3061 tcaaataaat ggcatt
//
LOCUS       DASCQP010000247         3025 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000933354, whole genome shotgun sequence.
ACCESSION   DASCQP010000247 DASCQP010000000
VERSION     DASCQP010000247.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3025)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3025)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3025
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000933354"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>3025)
                     /locus_tag="QF480_04160"
     CDS             complement(<1..>3025)
                     /locus_tag="QF480_04160"
                     /inference="COORDINATES: protein motif:HMM:NF013125.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lamin tail domain-containing protein"
                     /protein_id="HJN05786.1"
                     /translation="PNNITTISGPPPPTNLFTFMVEDTASMNYDGFFLKGSWDAGGQY
                     DPSWGGGIEHSPFYDDGTHGDVIADDHIWTCQQDLVVDGGTNTWEWGVNDSESNWIAG
                     NWQFTNPDQTPQTLIWTIPAVDDIVINEIMYNSPGTDEEWIELYNNTDQTINLENWNV
                     CDEDASHTHIYIPAGYSVAPGEYFTISIATGGAFPFTPDFDGTGNFALNNGGDAVRIW
                     NNNGLLVDIVTYDDSSPWPTEPDGNGPTLSLIQPDLDNALAESWRPSQQDLGTPGAIN
                     FPIAITAPNGGETIETNSTYDITWDVEDWDGNIVIELIRDGYDPIMLVSNLPVSTETF
                     AWNVFSTIDPASDYKILITNIDDDTPYDESDDYFTIVEGYVIPEIVITEIMYNPPESG
                     NDSLEFIEIYNNGAETVNLDGFMFTAGVDYTFPNVDLLPDSYLLVSINSDAMLSTFGV
                     DAYQWTGGALSNSGELIELSDSFANVIDSLTYDDSLPWDTLADGHGPSLTLCNPDADN
                     SIAENWTHSVNFAAINTEGDSIYATPGFACQVELLPAFEADNTTVSLNESVMFTDLSI
                     GDPIEWIWTFEGGTPDTYNGQTPPEIFYNELGTWDVTLYISDGTNNAEVTYPDYIEVV
                     YFAPPTNLEATVGPYDDVQLTWNAPVTNGFEDDFESYDDFVLEFLPWTNVDVDLSTTY
                     GMTGVDWPNAFAEQAFIIFNPSQTTPPVDDIIPHSGDKIAACFAATSPPNDDWLITPL
                     VGIGTGYKVSFWAKSYTADYGLERFRVGVSTSGVSPSDFTIISPGDYEEAPVDDWTEF
                     FYDLAPYAGQSIYLAIQCVSNDAFILLVDDFYVGASKSAIVYNAVNPIVGKAMKSINY
                     IATPAAIPNQNSQIDRNVINDLLGYNVYRDDIQINATIVEVTEYNDPEPTIGSHDYYV
                     TAVYDDGESDPSNVVSVVVTDINEVVANHISIYPNPTDGVFHIEFENNITAEIVIMDL
                     TGKEVYRNVTNRSININVSDLQKGMYLIRIIDLKSN"
BASE COUNT          984 a          630 c          499 g          912 t
ORIGIN      
        1 cattagattt taaatcaata attcgtatca aatacatacc cttttgtaaa tctgatacat
       61 taatattaat agatctatta gtaacgtttc tataaacttc tttacctgtt aaatccataa
      121 tgacaatttc agcagtaata ttattctcaa attcaatgtg aaagactcca tctgttggat
      181 ttggataaat actaatatga ttcgctacaa cttcattaat atcagttaca acaactgaaa
      241 ccacgtttga cggatctgat tcaccatcat cataaacagc agttacataa taatcgtgag
      301 aaccaattgt aggctcagga tcgttgtatt ctgttacctc aacaattgta gcattaattt
      361 gaatatcgtc gcgatataca ttataaccaa gaaggtcatt aattacgtta cgatctattt
      421 gagaattttg attaggaata gctgcaggtg ttgcaatgta gttaatactt ttcattgctt
      481 tgccaactat tgggttaact gcattataca caattgctga cttggaagct cctacataaa
      541 aatcgtcaac aagcaatata aatgcatcgt ttgacacaca ctggattgct aaatagatac
      601 tttgcccagc gtaaggagct aagtcataga aaaactcagt ccaatcatca actggtgcct
      661 cttcataatc tccgggggaa ataatagtaa aatcgctggg actaactccg cttgtagaaa
      721 ctccaaccct aaatctttca aggccataat cagcagtgta agattttgcc cagaatgaga
      781 ctttatatcc agtcccgatc ccaaccaatg gtgttatcaa ccaatcatca ttaggtggag
      841 aagtcgccgc aaaacaagct gcaatcttat caccggaatg tggaataata tcgtcaaccg
      901 gtggtgttgt ttgtgatgga ttaaaaataa taaatgcttg ttcagcaaag gcattcggcc
      961 aatcaacacc agtcattcca taagttgtac ttaaatcaac atctacgtta gtccatggca
     1021 aaaactcaag tacgaaatca tcgtatgatt caaaatcatc ctcaaaacca ttagttacag
     1081 gggcattcca tgttaactga acatcatcat aaggccctac agttgcctcc agatttgttg
     1141 gaggagcgaa gtaaactact tcaatatagt caggataagt cacttctgca ttattagttc
     1201 catctgagat atatagggtt acatcccagg ttcctagttc gttatagaaa atctcaggag
     1261 gtgtctgacc gttatatgta tcaggagttc ctccttcaaa tgtccaaatc cattcaatag
     1321 gatctccaat actcaaatca gtgaacatta cactttcatt taggcttaca gttgtattat
     1381 cagcttcaaa agcaggaagt aattcaacct gacaggcaaa tccaggtgtt gcataaattg
     1441 aatccccttc agtattaatc gcagcaaaat ttacagaatg agtccagttt tccgcaattg
     1501 aattatccgc atcaggatta caaagagtaa gtgaaggacc atgaccatca gctaatgtat
     1561 cccaaggtag agagtcatca taggttaatg agtcaattac gtttgcaaaa ctatcactta
     1621 gctctatcaa ttcaccacta ttgcttaacg caccaccagt ccattgataa gcatctactc
     1681 caaaggtact caacattgca tccgaattaa ttgaaacaag taaataacta tctggtaaca
     1741 gatcaacatt tgggaacgtg taatctactc cagcagtaaa cataaatcca tcaagattaa
     1801 cagtttctgc accattatta taaatctcaa tgaactcaag cgaatcatta cctgattcag
     1861 gtggattata cattatttca gtaataacaa tttctggtat aacgtatcct tcaacaattg
     1921 tgaaatagtc atcactttca tcatatggag tatcatcatc aatatttgtt ataagtatct
     1981 tataatcgct tgctggatca atggtactaa atacattcca tgcaaaggtt tctgtcgata
     2041 caggtaagtt tgatacgagc ataattggat catatccatc tctaattagt tctattacaa
     2101 tattaccatc ccaatcctca acatcccatg taatatcata agtggaatta gtttcaatag
     2161 tctcaccacc attgggtgca gttatggcaa ttggaaagtt aattgctcct ggggttccga
     2221 gatcttgttg acttggccgc caactttcag ctaatgcatt atctaggtcg ggttgaatca
     2281 atgacaatgt tggtccgttt ccatccggtt cagttggcca gggactgcta tcatcatatg
     2341 tcacaatatc gaccaataat ccattattat tccaaatcct aactgcatca cctccattgt
     2401 taagagcaaa attacctgtt ccatcaaaat caggggtaaa aggaaatgct cctccggtag
     2461 ctattgaaat cgtaaaatat tcacctggag ctacactata tccagcaggt atgtaaatat
     2521 gtgtatgcga tgcatcctca tcacaaacat tccagttctc caggttaatt gtttgatcag
     2581 tattgttata taattcaatc cattcctcat cggtaccagg agaattatac ataatctcat
     2641 ttattactat atcatcaaca gcaggtatag tccaaatcaa agtttgagga gtctgatcag
     2701 ggttagtaaa ctgccaattt ccagcaatcc aattactttc actatcattt actccccatt
     2761 cccaagtatt tgtaccacca tcaacaacaa gatcttgctg acaggtccat atgtggtcat
     2821 cggcaataac atcaccgtgc gtaccatcat cataaaaagg agaatgttca atgccgccac
     2881 cccatgaagg atcgtattga ccaccagcat cccagctacc ttttaagaag aatccatcat
     2941 aattcatgct tgcagtatcc tcaaccatga aagtaaagag gttcgtcgga ggaggtggtc
     3001 cggagatagt tgtaatatta ttggg
//
LOCUS       DASCQP010000248         1747 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000933595, whole genome shotgun sequence.
ACCESSION   DASCQP010000248 DASCQP010000000
VERSION     DASCQP010000248.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1747)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1747)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1747
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000933595"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            34..522
                     /locus_tag="QF480_04165"
     CDS             34..522
                     /locus_tag="QF480_04165"
                     /inference="COORDINATES: protein motif:HMM:NF025698.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4395 domain-containing protein"
                     /protein_id="HJN05787.1"
                     /translation="MKKYQSLISRARIKRLKVQGYSNYSDEMISELAFGNRFAYGLCS
                     AILLIGVILANIPLLAIMMIIALFGVILPYHPFDYIYNYLIRGMINKPKLTRRSKQLK
                     FACGIATIWIAAVIYLFYAGFALAGYIAGGVLSFVAILVSTTDICIPSIIFNFLFKVK
                     TK"
     gene            548..>1747
                     /locus_tag="QF480_04170"
     CDS             548..>1747
                     /locus_tag="QF480_04170"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030246 - carbohydrate binding [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GH92 family glycosyl hydrolase"
                     /protein_id="HJN05788.1"
                     /translation="MKQNIILLAGLLLLNSCQNNISSFSEKDFTQYVNPFIGTSKMGH
                     TFPGATAPFGMVQLSPQTNFEVMYNDDGSYNTSTYEYCAGYQYRDTTIIGFAHTNFSG
                     TGHSDLGDFLIMPTTGELVLDPLVTPDGNKGYYSTFSHDNETASPGYYKVDLDSYDII
                     AELTASERVGFHQYTFPKSDDAHIILDLVYNIYHHDNKNVWTFIRVENDSLVTGYRQT
                     KGWARTRKVFFAMQFSKPFESYGYRKYNDETYDGFYRRFDQSENFPEMAGKDIRAYFN
                     FNTEQDEKISIKFALSSVSTAGTLKNLESEIPHWDFKRTKAETKVNWNNELSKIKVKT
                     IKEEDMITFYTALYHTMLSPILYEDVDGQYRGLDQNIHTSDGFTNYTIFSLWDTYRAL
                     HPLFNIIQ"
BASE COUNT          573 a          291 c          303 g          580 t
ORIGIN      
        1 ttatagggta tttcagttat aaacattatt attatgaaga aatatcaatc gcttatttca
       61 cgcgctagaa ttaaacgtct taaagttcaa ggttatagta attattctga tgagatgatt
      121 tcggaacttg cattcggtaa taggtttgct tacggtctat gcagcgctat attgttaatt
      181 ggcgttatat tagctaatat ccctttgcta gctataatga tgattattgc actgtttggt
      241 gtcattcttc cataccaccc tttcgattat atctataatt acttaattcg aggaatgata
      301 aataaaccca aactaacacg acgatcaaaa caattaaaat ttgcatgtgg tatagccaca
      361 atctggattg ccgccgtcat ctatttattc tatgcaggtt ttgctcttgc aggatacatc
      421 gcaggaggag tactgtcttt tgttgcaatt ttggtaagca ccactgacat ttgtatacct
      481 tcaataattt tcaactttct ctttaaggtt aaaacgaagt aaaatttagt tacccccatc
      541 taatgaaatg aaacaaaata taattctatt agcaggtcta ttactcctaa attcatgtca
      601 aaataatatt tcaagtttct cagaaaagga cttcactcaa tacgtcaatc cttttattgg
      661 tacaagcaaa atgggacata cttttcctgg agccacagct ccttttggaa tggttcagtt
      721 gagtccgcaa acaaacttcg aagtaatgta caatgatgat ggtagttaca atacaagcac
      781 ttatgaatat tgtgcaggat accaatatag agacacaaca ataattggtt ttgcacatac
      841 caactttagt ggcacaggac attcagattt aggtgatttt ctaattatgc caactacagg
      901 cgaactagtt cttgatccat tagttactcc tgatggaaat aagggctact attctacttt
      961 ttctcatgat aatgaaacag cttcaccggg atattacaaa gttgatctgg atagctatga
     1021 tattattgct gaacttacag cgagtgaacg tgttggattc catcaatata catttccaaa
     1081 gtcagatgat gcgcacatta ttttagattt agtgtataat atttatcatc atgacaataa
     1141 aaatgtttgg acttttattc gtgttgaaaa tgattcgctc gtaactggct ataggcaaac
     1201 taaaggttgg gctagaacga gaaaagtatt ttttgcaatg cagttttcta aaccgttcga
     1261 aagttatggt tatagaaagt ataatgatga gacttatgat ggattttacc gtcgatttga
     1321 tcaatccgaa aactttccgg aaatggcagg taaagacatc agagcttact ttaattttaa
     1381 cacagaacaa gatgaaaaaa ttagcattaa gtttgcttta tcttctgtta gtactgccgg
     1441 caccttgaaa aatctggaat cagaaattcc gcattgggat tttaagagaa ccaaagctga
     1501 aactaaggtt aattggaata atgagctttc aaagattaaa gttaaaacca ttaaggaaga
     1561 agatatgatc acgttttaca cagcattata tcacactatg ttaagtccaa ttttgtatga
     1621 ggatgtagat ggccaatatc gtggtttaga tcaaaatata cacacgtcgg atggtttcac
     1681 taattataca atattctcac tttgggatac ttatagagcc cttcaccctt tatttaatat
     1741 catacaa
//
LOCUS       DASCQP010000249         4729 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000935136, whole genome shotgun sequence.
ACCESSION   DASCQP010000249 DASCQP010000000
VERSION     DASCQP010000249.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4729)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4729)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4729
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000935136"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1135
                     /locus_tag="QF480_04175"
     CDS             <1..1135
                     /locus_tag="QF480_04175"
                     /inference="COORDINATES: protein motif:HMM:NF012301.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HJN05789.1"
                     /translation="FLSSMSHQIRTPLSGILGFFDLLETELAVQGNEELYAYAKNIKE
                     SGERLINLITNIIDISSIEANILELNVSSCDLNNIIKGVEQTFSFKAKEKDLVFKTKY
                     DTELPKIEADHGSLVKVLNVIMDNAIKYTEKGFVTISTKYTNRDTVIIEIKDKGVGID
                     DETMKKLLASFEYKKHGSSLTYKGRGLGLILAQRLIDLMNGKLEIDSKFGIGTNVSIT
                     LPCTFDPDSDDTTKTTSQKASIISAPEFGIVKIFIVEDDRMNRLVLEKMLKKSGEILT
                     ADDGNDAIKKLEKSYSSGKIFDVMLIDINLPAPWDGILLMKEIKKRYPKYKSVPFIAQ
                     TAYALTGDKDLYLDAGFNDYISKPISKTELLTMIQKQLELVNT"
     gene            1165..2244
                     /gene="fbaA"
                     /locus_tag="QF480_04180"
     CDS             1165..2244
                     /gene="fbaA"
                     /locus_tag="QF480_04180"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013445430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004332 - fructose-bisphosphate aldolase
                     activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase"
                     /protein_id="HJN05790.1"
                     /translation="MTSKISNRVRPGFVFGDDLQTIFSIAKENHFALPAVNVVGTDSA
                     NAVMEAAMAVNSPVIIQFSNGGGAFYAGKGLSLENDKAAIAGSVSGALHIHKLADLYG
                     IPVILHTDHAAKKLLPWIDGLLDAGEEFFKTHGKPLFSSHMLDLSEEPLEENLEISKR
                     YLERLSKMGMTLEIELGITGGEEDGVDNTHIDSSKLYTQPEEVARAYEVLSEVSDNFT
                     IAAAFGNVHGVYKPGNVKLEPIILKNSQNYIQEKFGTKNNPLNFVFHGGSGSEPEKIK
                     EAISYGVIKMNIDTDTQWATWDGVRAYEEKYHAYLQCQIGNPEGDDSPNKKYYDPRKW
                     LRAGEQSMAERIKRAFEELNCIDRY"
     gene            2305..2706
                     /locus_tag="QF480_04185"
     CDS             2305..2706
                     /locus_tag="QF480_04185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05791.1"
                     /translation="MLNYPPKILLAFGETFGNTGDKFQTWLLENGYPELAALSSGIKG
                     SNDAIEWLLKNKFPQYAALEGAIDKKPDAYAWLKKYEFDFLVVFAEAINEKPKAIAWL
                     NEQDLKIFIVLAAKINSYRNNQTFDYHKLHF"
     gene            2789..3373
                     /locus_tag="QF480_04190"
     CDS             2789..3373
                     /locus_tag="QF480_04190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05792.1"
                     /translation="MKKYIHIALSLLIASLLTLTGCDSNSSKSEKKEGGVKAGNIAEA
                     DKSNPELTISLDNAAILMQKHNRLTQKWFNYTYTRAWIETLQTEENTFLYYLGVEASL
                     EGKNNEKAYSCYAVYSELTVNNNELYFYPNAYQQSCMGKCCSSCELEMFEDNVQGCIF
                     KPSANESEECKGRGGCVHNESIVPDEEQAKDDMI"
     gene            complement(3398..4405)
                     /locus_tag="QF480_04195"
     CDS             complement(3398..4405)
                     /locus_tag="QF480_04195"
                     /inference="COORDINATES: protein motif:HMM:NF005741.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase-like protein"
                     /protein_id="HJN05793.1"
                     /translation="MNLSTKYLGLELKNPIIVGASNLVTDLETIKKLEEAGAAAIVYK
                     SLFEEQIHLENLEMNQTMDGINERHAEMSSGISDTFDSGPDDFLLRFAEVKKAMSIPL
                     IASLNAIYDDTWEVYAKKLQDAGADALELNFYNNPKDFEMEGRSIINAELDIIEIVKK
                     AVSIPVSIKLSPFYTNPLYTFNEMDRKGVDGFVLFNRLFHPDINIYLEKLGSPYNLSS
                     EYDSRLPLRYVGLLYDNINADICANRGVYTGEDVIKMILAGANVVEVVSTIYKHGPKQ
                     ITKMLEDIEIWMANKQYETLDEFRGNVSKKNIKDPFAYRRAQYVDVLMKSTEIIRDYP
                     I"
BASE COUNT         1677 a          770 c          831 g         1451 t
ORIGIN      
        1 ctttttaagc agcatgagtc atcagataag aacaccttta agtgggatac taggattctt
       61 tgatttgctt gaaaccgagc tcgccgttca gggaaatgaa gagctctatg catatgcgaa
      121 aaatatcaag gaaagtggag aaaggctaat aaacttaatt actaatataa ttgatatttc
      181 cagtattgag gctaacatac ttgagcttaa tgtttcatca tgtgatttaa ataatataat
      241 taaaggagtt gaacagactt tttcatttaa agctaaagaa aaagatctcg tttttaaaac
      301 aaaatatgat accgaacttc cgaaaataga agctgaccat ggaagtcttg tcaaagtttt
      361 aaatgtaata atggataatg ccattaaata cactgaaaag ggctttgtaa ctatttcaac
      421 aaaatatact aatcgtgata cagtcattat tgaaataaaa gataaaggtg ttggaattga
      481 tgatgaaact atgaaaaagt tgcttgcttc gtttgaatat aagaaacacg gcagctcact
      541 aacatataaa ggacgtgggt taggattgat actggctcaa agattaattg atctaatgaa
      601 tggtaagttg gagatagact caaaattcgg cattggaact aacgtaagca ttacattgcc
      661 ttgtactttt gatcctgatt cggatgacac tactaaaaca acctctcaaa aggcatcaat
      721 aataagcgca cctgaattcg gtattgttaa aatttttata gttgaagatg atcgcatgaa
      781 tcgccttgta cttgaaaaaa tgttaaagaa atcaggtgaa atactcactg cggacgatgg
      841 aaatgatgcg attaaaaaac ttgaaaaaag ttatagctct ggaaaaatat ttgatgtaat
      901 gctaatagat ataaaccttc cggcaccttg ggatggtata ttacttatga aagaaataaa
      961 aaagagatat ccaaaataca aaagtgttcc atttatcgcg caaactgctt atgcactaac
     1021 aggcgataaa gatttatacc ttgatgcagg atttaatgat tacatctcta aaccaattag
     1081 caaaaccgaa ctattaacca tgatacaaaa acagcttgaa ttagtaaata cttaagataa
     1141 atcaatttcc caaaaaaaat tagaatgact tcaaaaattt caaatagagt tagaccgggt
     1201 tttgtattcg gtgatgattt acagaccatt tttagtattg caaaggaaaa tcattttgca
     1261 ctaccggcag taaatgttgt aggcacagac tctgccaatg ctgtaatgga agctgccatg
     1321 gcagtaaact cacccgtgat aattcagttc tcaaacggtg gtggtgcctt ttacgcaggg
     1381 aaaggattat cattagaaaa tgacaaagca gcaattgcgg gatcagtttc aggagcttta
     1441 catattcata agcttgcgga tctttatgga atacccgtaa ttcttcatac cgatcatgcc
     1501 gctaaaaaac tactgccttg gattgatggg ttattggacg ctggcgaaga attcttcaaa
     1561 acacacggga agccattgtt cagctcacat atgctggatc tttcagaaga acccttagag
     1621 gaaaaccttg agatatcaaa aagatactta gaacggctaa gtaaaatggg aatgacactt
     1681 gaaatagaat taggaataac cggaggagaa gaagatggtg ttgataacac acatatcgac
     1741 agctcaaaat tatatactca accagaagaa gttgcgagag cttatgaagt actgtccgaa
     1801 gttagtgaca attttaccat agcagctgca tttggcaacg ttcatggtgt ttataaaccc
     1861 ggaaatgtaa agcttgaacc aataattctt aaaaattctc aaaattatat acaagaaaaa
     1921 ttcgggacta agaataaccc actgaatttt gttttccatg gtggatctgg ttctgaacct
     1981 gaaaaaatca aagaagccat ctcatatgga gttataaaaa tgaatattga cactgacaca
     2041 caatgggcta cctgggatgg cgtacgtgct tatgaagaga agtaccatgc ttatttacag
     2101 tgccaaatag gaaatcctga aggtgatgat tcaccaaaca aaaaatatta tgatcctaga
     2161 aaatggttga gagccggaga acaatcaatg gcagaaagaa taaagcgtgc ttttgaagag
     2221 ttgaattgta ttgacagata ctaaaacaat ttgatttaga ctgttttagc ctctaattgc
     2281 ttagaattga aaaactgaaa ttatatgctt aattatcctc ctaaaatatt acttgcattt
     2341 ggagaaacat ttgggaatac cggcgataag tttcaaacat ggttattgga aaacggttat
     2401 cctgaattag ctgccttaag cagcggtata aaaggtagca atgatgccat tgaatggctt
     2461 ttaaaaaaca aatttccgca atatgctgcg ttggaaggtg caattgataa aaaaccagac
     2521 gcatatgcat ggctaaaaaa atatgaattc gactttctgg ttgtatttgc agaagcaata
     2581 aatgaaaaac caaaagccat tgcatggtta aatgaacaag atttgaaaat atttatagta
     2641 ctggcggcaa aaatcaatag ctatcgtaat aatcaaacat ttgattatca taagttgcat
     2701 ttttgagtta ttaattcttt aagtttattc gcacttttta aggttgctac aaataaaaat
     2761 aaatttagat ttgcaaaaaa ataaacaaat gaaaaaatac attcatattg ctttaagctt
     2821 gttaatagct tctttactta cattaactgg ctgtgattca aatagttcta agtctgaaaa
     2881 gaaagaagga ggtgttaaag ctggaaatat tgctgaagct gataagtcaa atccagaatt
     2941 aactatttca cttgataatg ctgctatact tatgcaaaag cataataggt taactcaaaa
     3001 gtggtttaac tacacctaca ctcgtgcctg gatagaaact cttcaaactg aagagaatac
     3061 attcctttac taccttggtg ttgaagccag tcttgaaggt aaaaataatg aaaaggcata
     3121 tagttgctat gcagtttatt cagaactaac ggttaacaac aatgaattat acttttatcc
     3181 taacgcatac cagcaatcgt gtatgggtaa atgctgctca agttgcgaac tggaaatgtt
     3241 tgaggacaac gttcagggtt gtatctttaa accttcggct aatgaatctg aagaatgtaa
     3301 aggcagagga ggatgcgttc ataacgaatc aattgtccca gatgaagaac aggcaaagga
     3361 tgatatgatt tgacaaaaca ggatgtcaga attgatctta aatcggataa tccctaataa
     3421 tttctgttga tttcattaat acatcaacat attgagctct gcgataagca aatggatctt
     3481 taatattttt ctttgacaca ttccccctga attcatcaag agtttcatac tgcttgttag
     3541 ccatccaaat ctctatatct tcaagcattt ttgttatttg cttcggtcca tgtttgtata
     3601 ttgtgcttac aacttcaaca acattggctc cagctagtat catttttata acatcttcac
     3661 cggtatacac acctctgtta gcacaaatat cagcattaat attatcatat aataatccta
     3721 cgtaacgaag tggtaatcga ctatcatatt ctgaactgag attgtatgga gagcctagtt
     3781 tttcaagata aatatttata tctggatgaa aaagtctgtt aaaaaggaca aaaccatcaa
     3841 ctcctttacg atccatttca ttaaacgtat atagtgggtt tgtgtaaaat ggactcaatt
     3901 taatacttac cgggatgcta acagctttct ttacgatttc aataatatca agttcagcgt
     3961 taattattga ccggccctcc atttcaaagt cctttgggtt attataaaaa ttcaattcca
     4021 aagcatcagc accagcatct tgaagttttt tagcatatac ttcccaagtg tcatcataaa
     4081 tggcatttaa acttgctatt aaaggaatgc tcatagcctt cttaacttct gcaaaacgca
     4141 ataaaaaatc atcagggcct gaatcaaaag tatcacttat acctgaagac atttccgcat
     4201 gacgctcatt aatgccatcc attgtttgat tcatttccag attttcaagg tgtatttgtt
     4261 cttcgaataa cgatttataa acaattgcag ctgcgcccgc ctcctctagt ttctttattg
     4321 tttccaaatc agttacgaga ttacttgcac cgacgattat gggatttttt aactctaacc
     4381 ctaagtattt tgttgatagg ttcatataat cataaattta tgggtaaaat tttattggct
     4441 gtaaaattac gatattttta ttttcatttc aaatatattg gaactacaat ctaaattgat
     4501 tttaaattgt aacataaccc aaaacaaatt agcttattta ggtagcaaaa tgtactgaat
     4561 tgagtaattt cgccaaattt tccaaactgg aaattttaat actttctaaa ttttaaaatt
     4621 atgaacagaa agaaaaaatt tattacttgt gagggtaact atgctgcctc acatatcgca
     4681 tatatgttta gcgaagttgc tgctatttat cccataactc cctcatcag
//
LOCUS       DASCQP010000250         3316 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000935773, whole genome shotgun sequence.
ACCESSION   DASCQP010000250 DASCQP010000000
VERSION     DASCQP010000250.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3316)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3316)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3316
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000935773"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1345
                     /locus_tag="QF480_04200"
     CDS             <1..1345
                     /locus_tag="QF480_04200"
                     /inference="COORDINATES: protein motif:HMM:NF026018.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="polysaccharide biosynthesis C-terminal
                     domain-containing protein"
                     /protein_id="HJN05794.1"
                     /translation="SLLFAQFAGLGINTVTIKLFPYFRNYERKHHGYLGLALLVSTVG
                     LIISVAAFVLLKSSILDTDNEGADLFAHYFYYIVPLIIFTLLFNVFDTYYRVLYNAVK
                     GIIYKEVIQRILILILIVLFFVNIIDFHQAVILYTIALISPTILLFLSLIYNKQLFLN
                     IDLSFVDRKLSYEMMNVGVFGILASFSAVLVMTIDTIMVERILGLSSLGVYTITFFFG
                     ALILVPLRTMGKISSVVIADAWRENDINVINQIYKKSSISLSVIGLLLFIGIWGNIDN
                     ILHIITDKYLSGKYVILFIGIASLFDIALSISPHIIVNSKHYRYLTYFLIIFAILLIV
                     SNYILIPIYGIVGAAIATLISKFIYNIIKYLFLYSKYKLQPFNFKTVLVYLIAIVAYG
                     VSLLLPEQRNYIVDILLRSSIITIIFMVPVYYFKISTDINSKIETTIKKIVTIIS"
     gene            1389..2372
                     /locus_tag="QF480_04205"
     CDS             1389..2372
                     /locus_tag="QF480_04205"
                     /inference="COORDINATES: protein motif:HMM:NF013383.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HJN05795.1"
                     /translation="MDRNLKICFIGSGTISTAMGNVLAQKGKYEVFLLSIERDVVDSI
                     SNDHINRKYFPNIDLDKSLKATFDKSVLSDSDIVFLGIPSNVVVSYISENKQYFGEDA
                     LIVNLAKGFGDGQKIIPQTLSKIIPNQIFSMKGPSFAREIINNMPTAFTLASRRDKHF
                     KLFETVFYNTSIHLDFSTDVTGVELASILKNIYAIMVGIIDAHFDSPNLRSLILTKAV
                     KEMRTIISKFGGEEDTMFNYCGIGDFTLTALNDLSRNRTLGLLIGKGFFTDYVSGKVV
                     LEGKVAVNIFVEEIAKKRGIKTKDLMLKELYKVFNDEKYDINNFVSNITKI"
     gene            complement(2404..2853)
                     /locus_tag="QF480_04210"
                     /pseudo
     CDS             complement(2404..2853)
                     /locus_tag="QF480_04210"
                     /inference="COORDINATES: protein motif:HMM:NF033679.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNRLRE domain-containing protein"
     gene            complement(2878..3264)
                     /locus_tag="QF480_04215"
     CDS             complement(2878..3264)
                     /locus_tag="QF480_04215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05796.1"
                     /translation="MKKLLILFCIYGLILLFDSCRKQVIITEDHICETCYDGIQNQNE
                     TGIDCGGFCMPCNIIIDTVYVFDTIIIIDTIIVIDTVVVIDTVVVMDTIVSMTMQPDP
                     LNGKDAVIHSIDLFTGGDYEYFWAAS"
BASE COUNT         1067 a          532 c          532 g         1185 t
ORIGIN      
        1 ttctttattg tttgcacagt ttgcaggact tggtataaac accgtgacaa ttaagctttt
       61 cccttatttc agaaattatg aacgtaagca ccatggatat ctggggcttg cattacttgt
      121 ttcaacagtt ggtcttataa tttcggttgc agcctttgtt cttcttaagt cttcaatact
      181 tgacactgat aatgagggag cagatttatt tgctcattac ttctactaca tagttccttt
      241 gataatattt acactacttt tcaatgtctt tgatacatat tatcgtgtcc tctacaatgc
      301 tgtaaaaggc attatttata aagaagtcat tcagagaatc ttaatactta tcttaattgt
      361 cctctttttc gtcaacatca ttgattttca tcaagcggta atcctatata cgattgcact
      421 tatatctcct acaatacttc tattcctttc attgatttac aacaaacaac tttttctaaa
      481 cattgattta agctttgtag acaggaaatt gtcatatgaa atgatgaacg ttggggtttt
      541 tggaatcctg gcaagttttt ccgctgttct ggtaatgaca atagacacta taatggttga
      601 acgaattctt ggacttagta gcctcggggt ttatacgatt acattcttct ttggtgcatt
      661 aatactcgta ccgctacgta cgatgggtaa aattagctct gtggttattg ctgatgcatg
      721 gcgagaaaat gatattaatg ttattaacca gatttacaaa aaaagtagta tcagccttag
      781 cgttattggt ttactcctat ttataggcat ctggggtaat attgacaata ttcttcatat
      841 aataactgat aaatatttgt cgggtaaata tgttattcta tttattggta tcgcaagctt
      901 atttgatatt gcgcttagta ttagtccaca cattatagtt aactctaagc attacagata
      961 ccttacatat ttccttataa tctttgctat acttcttatt gtttccaact atatattaat
     1021 accaatatat ggaattgttg gcgcagctat tgcaactttg atttcaaaat ttatttacaa
     1081 tattattaag tatttatttc tttacagtaa atacaaactg caaccattta actttaaaac
     1141 cgtattagtg tatttaatag ctattgttgc atatggagtg tcgttattat tgccggaaca
     1201 aagaaattat attgtggaca tattactcag aagcagtatt ataacaataa tatttatggt
     1261 accagtttat tattttaaga tctcaactga tatcaatagt aagattgaaa ccacaattaa
     1321 aaaaatagta actattattt cataatatga taattgtata gtgtggtatt tttttattag
     1381 gaaaaaagat ggacagaaat ttaaaaatat gctttatagg tagtggtaca atttcaactg
     1441 ccatgggcaa tgtacttgct cagaaaggta aatacgaagt ttttttactg tcgatcgaac
     1501 gggatgttgt tgattcaata agcaatgatc atataaaccg taaatatttc ccaaatattg
     1561 atctggataa atctctcaaa gcgacatttg acaaaagtgt actcagcgat tctgatattg
     1621 tttttctcgg aattccttcg aatgtagttg tttcatatat ttcagaaaac aagcaatatt
     1681 ttggtgaaga tgctttaatt gttaatctcg cgaaaggttt cggggatggt cagaaaataa
     1741 taccgcagac actttcgaag attattccta accagatttt tagcatgaag ggtccttcct
     1801 ttgcaaggga gattataaat aatatgccaa ctgcttttac tcttgcatcg agaagagata
     1861 aacattttaa actgtttgaa acggtatttt ataatacctc gattcatcta gatttttcaa
     1921 ccgacgtaac tggtgtagaa ctagcaagca ttctcaaaaa tatatatgca ataatggtgg
     1981 gcattatcga tgcacatttc gattcaccta acctccggtc attaatactt acaaaggccg
     2041 ttaaagaaat gagaactatc atttctaaat ttggaggaga ggaagatacg atgttcaatt
     2101 attgtggtat tggcgatttc acgcttaccg ctcttaacga cctaagtcgt aaccgcacac
     2161 tcggacttct tataggaaag ggttttttta ctgattatgt ttcgggaaaa gttgtgcttg
     2221 agggtaaggt agcggttaat atatttgttg aggaaatagc aaaaaagcga ggaataaaaa
     2281 caaaagatct tatgctaaag gagctttaca aggtttttaa tgatgagaaa tacgacatca
     2341 ataattttgt atccaatatt actaagattt agagctttta atcatcacta ttgaattatt
     2401 ttattaattt atctttctca ctttataaat aatctctaat tttggtctca aagttggatc
     2461 attgttatca cttgtggcaa atgccatcat cctatatgga aattcttcat tcaaacgtat
     2521 cataaaacca aacccattat caggatcatt cagaatatct tcaataatta gtttcacccc
     2581 cacatcgaga tagttttgat cgggaatggc agagggatat agttcaactt gattctgtgt
     2641 agtaatattt ggttgattat cccaactcac tttattttca ctccaattag aagtcactct
     2701 ttgaatcatg gaataattat aagtgccata tatattataa gtagaatgtt gatcaggtgc
     2761 actttttttg ccatacaatg ataatctggc atcaattatt gatgcatttt gaggtatgtg
     2821 tgaaatgtca aattctaata atgccctcat aacaccttca ttgccaccat tccatgtcta
     2881 tgatgcagcc caaaaatatt cataatcacc acctgtaaat aaatcaatgc tgtgaataac
     2941 ggcatcttta ccatttaacg ggtcaggttg cattgtcatc gatacaattg tatccataac
     3001 aacaactgtg tctattacta caactgtatc aattactatt atagtatcga ttattattat
     3061 agtatcaaat acgtaaactg tgtcaattat aatattgcaa ggcatgcaga accccccaca
     3121 atcaatccct gtttcatttt gattttgaat accatcataa catgtttcac atatgtgatc
     3181 ttcagttata ataacttgct tacgacagga atcaaataag agaattaaac cataaatgca
     3241 aaataaaatt agcagttttt tcattgggtt aggttttgag ttattaatac aattgagtaa
     3301 ttgaatgatt taacta
//
LOCUS       DASCQP010000251         2689 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000943611, whole genome shotgun sequence.
ACCESSION   DASCQP010000251 DASCQP010000000
VERSION     DASCQP010000251.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2689)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2689)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2689
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000943611"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..618
                     /locus_tag="QF480_04220"
     CDS             <1..618
                     /locus_tag="QF480_04220"
                     /inference="COORDINATES: protein motif:HMM:NF012797.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HJN05797.1"
                     /translation="KERFNEIIKYRTRHFTVVLEDIYQPHNASAILRTCDLTGIQDVH
                     IIENNNHYEVNPEVALGSSKWLNLFKHNTADNNTIGAINALKDKGYTVVATTPHKKDW
                     NLDSLPLDKKIAFMFGTELLGLSDIAINSADEHLRIPMFGFTESYNISVSAALVLFTV
                     TQRLRASNIDWRLSNNEITDILLDWTRRSINKHELVEQHFLNNIL"
     gene            681..1148
                     /locus_tag="QF480_04225"
     CDS             681..1148
                     /locus_tag="QF480_04225"
                     /inference="COORDINATES: protein motif:HMM:TIGR04560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein THX"
                     /protein_id="HJN05798.1"
                     /translation="MGKGDKKTKRGKIIIGSYGNKRRKKRTPLYVPPVKRKPAKKAEP
                     VVEEVVVEVEEVIEVPKEKATPKTETKKAPVKKAAAKKPAAAKKVTATKKTTATKKTT
                     ATKKTTVAKKAVTTKEKAPAKPKTTKKAPATKKTTTAKKATSKKTDTSDKAEK"
     gene            1346..1999
                     /locus_tag="QF480_04230"
     CDS             1346..1999
                     /locus_tag="QF480_04230"
                     /inference="COORDINATES: protein motif:HMM:NF024811.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD hydrolase-like protein"
                     /protein_id="HJN05799.1"
                     /translation="MQKFNNKKIIIWDWNGTLLNDANFCVMCMNKVLSKRQLQRIDVE
                     QYRNLFTFPVKDYYEAIGFNFDLEDFEVPAMEFIDLYYPNLDMASLHAEAKDVLLFFS
                     KLGFRQLVLSAMEHSNLVKSLTDKGIISFFDDISGINDHYAVSKLEMGKNMITKLGVP
                     RSEILIIGDTIHDFEVALGLGVDCILVTNGHQSRERLLKTTPNVLSQLKDVTNLFQS"
     gene            complement(2005..>2689)
                     /locus_tag="QF480_04235"
     CDS             complement(2005..>2689)
                     /locus_tag="QF480_04235"
                     /inference="COORDINATES: protein motif:HMM:NF019284.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="toxin-antitoxin system YwqK family antitoxin"
                     /protein_id="HJN05800.1"
                     /translation="ITLIILLTQCFTLNAQLVNQANSTGQKTGSWVKYFDNNKIKYEG
                     QFNNDKPFGKFTYYYKNGSIKTISVFSENGTIAHNISYYKNGKLLAEGKYVKQQKDSI
                     WRYYLNEKSNPLISVETYVNGILHGESITYYSDTGKPAEIVFFKDGKKNGKLLKYFPD
                     GNLMTESYYVNGMPDGKFTHYHPDGEVQITGSYKNGKQVGDWKYYDENGKQVDKDEFR
                     KQEEVKEIK"
BASE COUNT          960 a          465 c          445 g          819 t
ORIGIN      
        1 aaagagcgat ttaatgaaat cataaaatac cgaaccagac attttacagt tgttcttgaa
       61 gatatttacc aacctcataa tgcaagtgcc atccttcgca cttgtgattt aactggtatt
      121 caagatgtcc atattatcga aaacaacaat cactacgagg tgaatccgga ggtggccctt
      181 ggctcttcaa agtggttaaa cttattcaaa cataataccg cagataacaa taccataggg
      241 gcaattaatg cattaaaaga taaaggttat actgttgttg ctacaacacc ccacaaaaaa
      301 gattggaatt tggatagctt accattagac aaaaaaattg cttttatgtt tggtacggag
      361 ctcctgggtc tttctgatat agccatcaac tctgctgatg aacaccttcg tattcctatg
      421 ttcgggttta ctgaaagtta taatatttcg gtttcagcag cgcttgtttt attcacagta
      481 acacaaagat taagagcaag caatattgac tggagactga gtaataatga gataacagac
      541 atacttcttg attggacccg cagatcaata aacaaacatg aattagtaga gcaacatttt
      601 ttgaataata tactctagag cttgttccgt aattgatttt tcataatttt accgcatatt
      661 ttaacaataa acttttaaac atgggaaaag gtgataaaaa aacgaaaaga ggaaagatta
      721 taataggatc gtatggtaat aaacgacgta aaaagaggac acctttgtac gttccacccg
      781 tcaaaaggaa gccagctaaa aaagcagaac ctgttgttga agaagtagtt gttgaagttg
      841 aagaagtaat tgaagtacca aaagaaaaag ctacaccaaa aactgaaaca aagaaagcac
      901 cagtcaaaaa agctgctgcg aagaaacctg ctgctgctaa aaaagtaaca gcaactaaga
      961 aaaccactgc aacaaagaaa accaccgcga caaagaaaac aacggtagca aaaaaagctg
     1021 ttactacaaa agaaaaagca cctgcaaaac caaaaacaac aaaaaaggct ccagcaacaa
     1081 aaaagacgac aacagctaaa aaagctacat caaaaaaaac tgacacatca gataaagctg
     1141 aaaaatagca agtaagatat tccttgcagg cattatctta ataactttaa tatcattttc
     1201 ttatttacaa ttagttgtaa taattttaca acttatggct tgtagtattt tgaatttcat
     1261 taaagtaaaa ggaataacac tcgactatct gcatcttgaa agtatatgaa ctataataca
     1321 tactacggtt atttgacttg tctccatgca aaaatttaat aacaaaaaga taataatatg
     1381 ggattggaat ggcacattgc taaatgatgc caatttttgt gtaatgtgca tgaacaaggt
     1441 attgagcaaa cgtcaattgc agagaataga tgttgaacaa taccgcaacc tctttacttt
     1501 tcctgtaaaa gattattatg aagctatagg gtttaatttc gaccttgaag actttgaagt
     1561 accagctatg gagtttattg atctttatta tcctaattta gatatggcga gtctgcatgc
     1621 agaagcaaaa gatgttctat tattttttag caaactgggc ttcaggcaac tagttctctc
     1681 agcaatggaa catagcaacc tagtcaaatc actaaccgat aaaggaataa ttagtttttt
     1741 cgatgatatt tcagggatta atgaccacta tgcagttagt aagcttgaga tggggaaaaa
     1801 tatgataaca aagttaggtg ttcctagaag tgaaatatta ataattggtg atactattca
     1861 cgattttgaa gtagcattgg ggctcggtgt agactgcatt ttggttacca acggacatca
     1921 atcgcgagag cgattattaa aaacgacacc aaacgtacta tcacagttga aggatgtaac
     1981 aaatcttttt caaagctgaa acaattattt tatttctttt acttcttcct gtttcctgaa
     2041 ttcatcttta tcaacctgtt tcccattttc gtcgtagtat ttccaatctc caacttgttt
     2101 gccgttttta taactacctg ttatttgcac ttctccatca ggatggtagt gagtaaattt
     2161 cccatcaggc ataccattaa cataataact ctcagtcatc aggttgccat ctggaaagta
     2221 cttaagtaat ttcccatttt ttttgccatc tttaaagaaa actatttcag ctggttttcc
     2281 tgtatcggaa taatacgtga tactttcacc atgaaggatt ccgttaacat aagtttctac
     2341 tgaaataagt gggttagatt tttcatttaa ataatatctc cagatgctat ccttttgctg
     2401 cttaacatat ttaccttcag ctaacaactt accattcttg tagtatgata tattatgagc
     2461 aatggttcca ttctcagaaa aaacactgat agttttaata ctgccatttt tataatagta
     2521 agtaaattta ccgaagggtt tatcattgtt aaactggccc tcgtacttaa ttttattatt
     2581 atcaaaatat ttaacccaac tacctgtttt ttgaccagta ctattagcct gattcacaag
     2641 ctgggcattt aaagtgaaac attgagttaa taaaattatc agtgtaatc
//
LOCUS       DASCQP010000252         2870 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000946906, whole genome shotgun sequence.
ACCESSION   DASCQP010000252 DASCQP010000000
VERSION     DASCQP010000252.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2870)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2870)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2870
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000946906"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(67..1182)
                     /locus_tag="QF480_04240"
     CDS             complement(67..1182)
                     /locus_tag="QF480_04240"
                     /inference="COORDINATES: protein motif:HMM:NF017495.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF819 family protein"
                     /protein_id="HJN05801.1"
                     /translation="MESLISPDSHVVLFLMVIGAAALGIYSEYKKWFGKLSGILVTMI
                     SMSLLSMAGVVPVASNPNIKVDVYEMVFSYFIPISIPMLLFSTNITKIIKESGKLLVA
                     YIIGAIGIVIGCFIAYSFIDLGEDSGNTAGVIAATLIGGSVNFIAAAKILNFSTNPMF
                     TATIAVDNFVSNLYTLFLFLTPSIIFLSRFFVKPKKENLEDKDEKQLEEKFPITMERI
                     AVSLFIAALIAAMGNIIAPPLQNLLQTDLNLSLLLITIFAVVAANLFPKKLIALEKTS
                     FSLGMWMMYVFLAVIGAATNIEQILSIGPSVLLFYITIMLFHFVFLVSLAKLFKLDVY
                     EVVGSSAANIMGPSVAAPMAASRGRKKLVTPASLSEY"
     gene            complement(1300..2001)
                     /gene="ric"
                     /locus_tag="QF480_04245"
     CDS             complement(1300..2001)
                     /gene="ric"
                     /locus_tag="QF480_04245"
                     /inference="COORDINATES: protein motif:HMM:TIGR03652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster repair di-iron protein"
                     /protein_id="HJN05802.1"
                     /translation="MEIKKIDELTVGEIVANDFRASSVFKNAGIDFCCGGKQSLEEAC
                     LEKGINKEELALELKNLEKEPTNNSINFKEWELGFLCDYIVNTHHKFVAKNLPEIVFY
                     TEKIATVHGEHHPELIVVANLFSKINDALIPHSKNEEEILFPAIKEMVLNESPTAKKT
                     IVSEITRMLEEHDNAGKAMDEINRKTKSYQVPEDGCATYQVAFKMLQEFEDDLHVHVH
                     LENNILFPRAIELAS"
     gene            2255..>2870
                     /locus_tag="QF480_04250"
     CDS             2255..>2870
                     /locus_tag="QF480_04250"
                     /inference="COORDINATES: protein motif:HMM:NF016494.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LpxD N-terminal domain-containing protein"
                     /protein_id="HJN05803.1"
                     /translation="MKSLTIKEINEILKGELVGDTNQRIIGAEQLDKASNNHISFIGS
                     SKYALLWDTSKACAAIVNDKLEIEPGENRALIKVNNADLAMAKLLEVFDPGLPQVDYD
                     IHPTAVIHESATMGKGCKIGAGSYIGKDVILGDSVVLFPNVTILDETKIGNGTVIWSG
                     TVIRERCEIGQFCIFHTNVSIGADGFGYRPSEDGKGLVKIPHIGN"
BASE COUNT          933 a          490 c          495 g          952 t
ORIGIN      
        1 tatccattga gcttcacgat aggtacattg caattgaaac accaataaaa gttccaatta
       61 cataccctag tattccgaca aggatgccgg tgtaactagt ttttttcgtc ccctggatgc
      121 cgccattggt gccgctaccg aaggccccat tatgtttgct gcagatgaac caactacttc
      181 ataaacatct agtttgaaaa gtttcgctaa agaaaccaaa aacacaaaat ggaaaagcat
      241 tattgtaatg tagaataata gtacggaggg gccaatactt aatatttgct caatattggt
      301 cgctgctcca attactgcta aaaacacata catcatccac atgccaagtg aaaaagatgt
      361 tttctctaaa gcaattagtt tttttggaaa cagattagct gcaacaaccg caaaaattgt
      421 aattaaaagt aggctcaaat taagatctgt ttgtagtaga ttttgtaatg ggggggcaat
      481 tatattgccc atggcagcaa ttaatgctgc aataaataac gaaacggcaa ttcgctccat
      541 tgtaattggg aatttttctt ccagttgctt ttcatcttta tcctcaagat tttccttctt
      601 tggctttaca aaaaaccgtg agagaaaaat aatagaaggg gttaaaaaca gaaataaagt
      661 gtataaatta gatacaaaat tgtcaacggc gattgttgct gtaaacatgg gatttgtact
      721 aaaattcaat attttggcag cagcaataaa attaacacta ccacctataa gagtagccgc
      781 aataacacct gcggtatttc cagaatcctc ccccagatcg ataaagctat aagcaataaa
      841 acatcctatt acaataccta ttgctccaat aatatatgct actagtagct ttccactttc
      901 ctttattatt tttgtaatat tggtgctaaa taataacatt ggaattgaaa taggaataaa
      961 gtagctgaat accatctcgt atacatccac tttaatgttc ggattagaag caactggaac
     1021 tactcctgcc attgatagta aagacataga aatcatagtt acaagtatgc cagaaagttt
     1081 gccaaaccac tttttatatt cagaataaat acctagggcc gctgcgccga taaccattaa
     1141 aaacaaaact acgtggctgt cgggggatat taatgactcc ataatgcgct ttaattattt
     1201 tagcgccgaa gatatggttt atttaagaat tagttagaaa ttaaaaatga tttaaacaac
     1261 gtcagaaaaa agttggttat tcaaattagt gagctctttt taacttgcca attcaatggc
     1321 tctaggaaaa agtatgttgt tttcaaggtg aacatgaaca tgtagatcgt cttcaaattc
     1381 ttgaagcatt ttaaatgcga cctgatacgt tgcacaacca tcttccggca cttgataaga
     1441 ctttgttttc ctgtttattt catccatagc ttttccggca ttatcatgct cttccaacat
     1501 acgcgtaatc tcacttacaa ttgtcttctt tgctgtcggt gattcattta aaaccatttc
     1561 tttaattgca ggaaaaagaa tttcctcctc gtttttcgag tgaggtataa gtgcgtcatt
     1621 tattttgcta aataggtttg caacaacaat taattcagga tggtgttctc catgtacagt
     1681 tgctattttt tctgtataaa atactatttc aggtaaattt tttgcaacaa atttatgatg
     1741 cgtattaaca atgtaatcac ataaaaatcc taattcccat tctttgaaat taatggaatt
     1801 gttggttggt tccttttcaa ggtttttcaa ttctaatgct aattcttctt tattgattcc
     1861 tttttcaagg caagcctctt caagactttg ttttcctccg caacaaaaat caatacctgc
     1921 atttttaaaa actgatgatg ctctaaaatc gtttgctaca atttcaccaa ctgttaattc
     1981 gtctattttt tttatttcca tctctgatat attttgtttt ttgaatttgc aaatatatta
     2041 aatgtttaat aaaagacatc aatgtctttt atttgtttga tggttgtaag aatccaagaa
     2101 attaaataat tgaggtttac cagctattga ccttagctct acttctttaa aattccagaa
     2161 taatacttaa caaaccaaaa atggtatcca tttccttgtt ttttatagtt ttgccagcac
     2221 tgtacacaaa ggtccattaa caaaaaagaa ccctatgaaa tcgttaacaa ttaaagaaat
     2281 caacgaaata ttaaaaggtg aattggttgg agatactaat cagcggataa taggagctga
     2341 gcaacttgac aaagcgtcta ataatcacat ttcatttatt ggaagttcga aatatgcatt
     2401 gttatgggat acgtcaaaag cctgtgcggc aattgttaat gataaactgg aaattgaacc
     2461 aggtgaaaat cgtgcattaa ttaaagtaaa taatgcagat ctggctatgg ctaagttatt
     2521 ggaagtgttt gaccctggtc ttcctcaggt tgattatgac attcatccaa cagctgttat
     2581 tcatgaatca gcaacaatgg gaaaaggttg taaaattggt gcgggtagtt acattggcaa
     2641 agatgttatt ttgggcgata gcgttgtttt atttcctaac gttacaattc tagatgaaac
     2701 caaaattggt aatggtactg ttatttggtc ggggaccgtt attcgagagc gttgcgaaat
     2761 agggcaattt tgtatttttc acactaatgt aagcattggt gctgatggat ttggttatcg
     2821 tccgagtgaa gatggcaaag ggcttgttaa aattcctcat attgggaatg
//
LOCUS       DASCQP010000253         5738 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000949107, whole genome shotgun sequence.
ACCESSION   DASCQP010000253 DASCQP010000000
VERSION     DASCQP010000253.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 5738)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5738)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5738
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000949107"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            109..300
                     /gene="rpmF"
                     /locus_tag="QF480_04255"
     CDS             109..300
                     /gene="rpmF"
                     /locus_tag="QF480_04255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010264557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HJN05804.1"
                     /translation="MAHPKRKISKTRRDKRRTHYKAESPQLATCSTTGTIHVYHRAYY
                     VDGDMYYKGKLVVENAKAE"
     gene            486..1478
                     /locus_tag="QF480_04260"
     CDS             486..1478
                     /locus_tag="QF480_04260"
                     /EC_number="2.3.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009137900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0033818 -
                     beta-ketoacyl-acyl-carrier-protein synthase III activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HJN05805.1"
                     /translation="MSKINAAITGIHAWVPEYILTNKELETLVDTSDEWIVTRTGVKE
                     RHILKGEGQGTSVIGAKAVEGLLKKTNTSPDEIELIICATATPDMLFPATATIISENI
                     GIKNAFSYDLNAACSGFLYALETGRRFVESGQYKKVIIVGADKMSSIVDYTDRTTCIL
                     FGDAGGAVLLEPTTENLGIIDSALYSDGVGIPHLHQKAGGSAKPPTHETIDAREHFIF
                     QEGQSVFKFAVTKMADVSAEIMERNNLKAEDVAYLVPHQANMRIIDATARRMGIEREK
                     VMNNIERYGNTTNGTIPMCLFEWAPKLKKGDNLILAAFGGGFTWGSIYLKWAID"
     gene            complement(1551..2009)
                     /locus_tag="QF480_04265"
     CDS             complement(1551..2009)
                     /locus_tag="QF480_04265"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN05806.1"
                     /translation="MKLFQLIGGEEGSGAIDDMWAMHNVFTDLGFSENELFSIEVENG
                     QHNEAFWKEQFADAYLWMYTSFANDINEIIRSVEMEITPNPAKNYITLDSNKFGNNDS
                     LEIIDMRGRKIMNLNIGDNGKVDVKGLNPGSYILIIKTKERTYYGKFIKI"
     gene            complement(1981..2940)
                     /locus_tag="QF480_04270"
     CDS             complement(1981..2940)
                     /locus_tag="QF480_04270"
                     /inference="COORDINATES: protein motif:HMM:NF012958.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase-fold protein"
                     /protein_id="HJN05807.1"
                     /translation="MNRISIFLVIIFSCTALIGQVTFIISSLPESTPSEDIIYLAGDL
                     NSWNPGNPDFALEKNTDELWFITLPGQPDGSQIEFKFTRGDWGTVEKGANGEEIANRE
                     FTFGNGDTVYVEILTWADTGGSGSSTAAENVFIIDENFYIPQLDRTRRIWIYLPPDYD
                     NSNEHYPVLYMHDGQNLFDAFTSYLGEWEIDETLNELAEDGYQVPIVVGIDNGGEERM
                     NEYNPWVNPQYGGGQGDEYIDFLVFNLKPYIDENYRTLSGKENTGIMGSSMGGLISQY
                     GALKFQDVFSKSGIFSPAYWTADSIWAFTNETGKHETFSVNRW"
     gene            3084..3626
                     /locus_tag="QF480_04275"
     CDS             3084..3626
                     /locus_tag="QF480_04275"
                     /inference="COORDINATES: protein motif:HMM:NF015674.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF308 domain-containing protein"
                     /protein_id="HJN05808.1"
                     /translation="MKSNSYSINWSVLAFNGLIALLFGLMAIFSPLDTLKVIIMYFGI
                     VMIIVGIAMMFGVYSSMKNKLNYGTDLISTIVTIGLGVVLSFFTEKTLEIFVFIVGIW
                     AILLGIGQLIIMASLETKGDKRFLLYSGLFTIIFGILLFFNPFALASVFVVIIGVMSI
                     IIGIVLISFAFKLKNLQNSK"
     gene            complement(3665..5413)
                     /gene="recJ"
                     /locus_tag="QF480_04280"
     CDS             complement(3665..5413)
                     /gene="recJ"
                     /locus_tag="QF480_04280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018338420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008297 - single-stranded DNA
                     exodeoxyribonuclease activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HJN05809.1"
                     /translation="MKKRWVLREKPDHEVVERLSKELNINTILTTLLIFRGITTYKDA
                     KSFFRPQLTDLLDPFLMKDMDKAVERVISAKTTGEKIMVYGDYDVDGTTAVSIVYSYL
                     KNTHKKVDFYIPDRYKEGYGISYIGIDYAVEHGYKLLISLDCGIKAVEKVDYAKKKGL
                     DIIICDHHRPGEIIPDAVAVLDPKQPDCNYPFKELSGAGVGFKLIQALSIRSEIPVEK
                     IYSCLDLVAISIAADVVTMVGENRTLSYFGLKNLNKEPRIGVKSLLKSAGVGKKMSLG
                     EDQYFKKKITVSDLVFLLGPRINAAGRIESATDSVRLLISNNIEYAEKLGKQINDLNT
                     TRRELDSNITKEALQILNEDKNINNKKATIVYNDNWHKGVVGIVASRLIDSYYRPTIV
                     LTKADGILSGSARSVKNFDIYDAIDSTSHLLENFGGHKYAAGLALKPENLDEFISKFQ
                     DYADKHISEDMLVPEIEIDAELFISDINFKFYKILMQFAPFGPGNMSPVFQTKNVIDT
                     GFAKLVGKKDNKHLKFSVVHPDRTGNPVPAIAFNQGRHLEEMEKGTPFEICYHIDENT
                     WLGSTTLQLRVLDIRF"
BASE COUNT         1748 a         1031 c         1002 g         1957 t
ORIGIN      
        1 gaaatgataa atcaactcaa taagtactca gaacaaaaaa gtgatcttcg atgggacgct
       61 ttaaagaaca taaatataga ataaaattaa ttaaataaag aaataaaaat ggcacatcca
      121 aaacgaaaaa tttcgaaaac caggagagat aagagaagga ctcattataa ggccgaatct
      181 cctcaattag caacgtgctc taccaccgga acaattcatg tttaccaccg tgcttattat
      241 gttgacggtg atatgtatta taaaggtaaa cttgttgttg aaaacgccaa ggcggaataa
      301 ataaacagtc tttttaaccg atttttagaa ttaataattt tgataattgg tcaagataat
      361 aataataaac tctaggatgt ttttctgttc aggagtttat tttagtttag accataattt
      421 ttatgtttta aaatgccaat tgaaaatttg tatttttgag cctcaataat ttgaaaaaac
      481 aacgtatgtc aaaaattaat gcagctataa ccggaataca cgcgtgggtt cctgaatata
      541 ttctgacaaa taaagagctt gaaactttag tggatacttc agatgaatgg atcgttacac
      601 gtactggggt aaaagaaaga cacatactaa aaggtgaagg acagggaaca tcagttattg
      661 gtgcaaaagc agttgaaggt ttgcttaaaa aaacaaatac ttctcctgat gaaattgaat
      721 taataatctg tgccacagca acccccgaca tgttgtttcc tgcaacagct acgattatta
      781 gtgaaaatat tggaattaag aatgctttta gttacgattt aaacgcggct tgttcagggt
      841 ttctttatgc ccttgaaact ggccgaagat ttgttgagtc aggacaatat aaaaaagtta
      901 taattgttgg tgcagataaa atgtcctcaa ttgttgatta tactgatcgg acaacgtgta
      961 tattatttgg agatgctggc ggtgctgtat tattagagcc aacaactgaa aatctaggaa
     1021 ttatcgattc tgctttatat agtgatggtg taggaatacc ccacctacat caaaaagctg
     1081 gtggttcggc aaaacctcca acacatgaaa ctattgatgc gcgcgaacat tttatttttc
     1141 aagaggggca gtccgtattt aaatttgctg ttactaaaat ggcagatgtt tcagctgaaa
     1201 taatggagag gaataatctt aaggcagaag atgttgcata ccttgttcct catcaggcaa
     1261 atatgcgtat aattgatgct actgcaagac gtatgggtat tgaaagggag aaggtgatga
     1321 acaatataga gcggtatggc aatactacta atggaacaat tccaatgtgt ctttttgaat
     1381 gggctccaaa attaaaaaaa ggcgataatc ttattcttgc tgcttttggt ggtggattta
     1441 cctggggttc tatttattta aaatgggcta ttgactgaga ttataaattg gctaattaaa
     1501 atctacttcc gatttgttaa tttggagatg gttttttgtt ttgaaacttc ttatatcttt
     1561 ataaactttc cgtaataagt tctctctttt gttttaataa tcaatatata actgcccgga
     1621 tttaatccct taacgtcaac ctttccattg tcgccaatat taaggttcat gatttttctt
     1681 cccctcatat caattatctc aaggctgtcg ttgtttccaa atttattact gtctagcgta
     1741 atataatttt tagcagggtt tggggttatt tccatttcta cacttctgat aatttcgtta
     1801 atgtcattgg caaaagaagt atacatccat aagtaagcat cggcaaattg ttccttccag
     1861 aaggcttcat tgtgttgtcc gttctctact tcaattgaaa aaagttcatt ttcactaaat
     1921 ccaagatctg tgaatacatt atgcatagcc cacatatcat ctatcgcacc agatccttcc
     1981 tcaccaccta ttaactgaaa aagtttcatg tttgcctgtt tcatttgtaa atgcccatat
     2041 cgagtcagct gtccagtaag ctggagaaaa aattcctgat ttgctaaaaa catcctgaaa
     2101 tttaagtgcg ccgtattgtg aaattaaccc ccccatggaa cttcccatta tacccgtatt
     2161 ttcctttcct gacaaggttc gatagttttc atcaatatac ggttttaagt taaatacaag
     2221 aaagtcgata tactcatctc cttgccctcc tccatactgt gggtttaccc atggattata
     2281 ctcattcatt ctttcctctc ctccgttatc aattcctacg acaataggca cctgataacc
     2341 atcttcggca agttcgttca gggtctcatc aatttcccat tctcctaaat aggaggtaaa
     2401 cgcatcgaaa agattttgcc catcgtgcat atataacact gggtaatgtt cattggaatt
     2461 atcataatcg gggggaagat aaatccatat tcgcctggtg cggtctaatt gtggaatata
     2521 aaagttttca tctataatga acacattttc ggctgcagtt gagctaccgc tcccacccgt
     2581 atcggcccag gttaatatct caacataaac ggtgtcgcca ttcccgaaag taaattctcg
     2641 atttgctatt tcttcgccgt tggctccttt ttcaacagta ccccaatcac cacgggtaaa
     2701 cttaaattct atttgacttc catcaggttg tccaggaagt gttataaacc acaattcatc
     2761 agtgtttttt tcaagtgcga aatcaggatt tccgggattc catgaattca gatctcctgc
     2821 tagatatatt atatcctcgg agggtgtcga ttccggtaat gagctgatta tgaatgtcac
     2881 ttgtcctatt aatgcggtac aggaaaaaat gattactaga aaaatgctaa ttctgttcat
     2941 ggtgttaagt ttggttatta ctaccttgtt ctcagccttt ttgctccttt tatttgttat
     3001 gttaatacaa aattagacta ttctttaata aaaatccaaa tccagaaata agttatcttt
     3061 actgctcact aatattctta aaaatgaaat caaactctta ttcaattaat tggtcggtat
     3121 tggcttttaa cggattaatt gccttgctat ttggtttaat ggctattttc tctccattag
     3181 acactctgaa agttattatt atgtatttcg gcattgttat gattattgtg ggtattgcaa
     3241 tgatgtttgg ggtatattca agcatgaaaa acaaattaaa ttatggaacc gatttaatta
     3301 gcaccatagt tacaattggg cttggtgtgg ttctgtcatt ttttacagaa aaaactcttg
     3361 aaatttttgt gtttattgtc ggaatctggg caattctact tggtattggc caattaatta
     3421 ttatggcaag cctagaaacc aagggtgata aacggtttct actttacagc ggcttattta
     3481 ctataatttt tgggatactt ctctttttta atccttttgc cctggcatcc gtttttgttg
     3541 taattatagg tgttatgtcc attattattg ggattgtgct gatttcgttt gcttttaaac
     3601 taaagaatct tcagaatagc aaataaagaa atttaatggt ataggttgaa attagcgttt
     3661 gaatttaaaa cctaatatct aatactcgaa gctggagtgt tgttgagcct agccatgtat
     3721 tttcatcaat gtgataacat atttcaaagg gtgtaccctt ttccatttct tccaaatggc
     3781 gaccctgatt aaaggcaatt gcgggcacag gattccctgt tctgtcagga tgtactacgg
     3841 aaaattttag gtgtttgttg tctttctttc caacaagttt tgcaaaacct gtatcaatca
     3901 cattttttgt ttgaaaaaca ggtgacatat tgccagggcc gaaaggggca aattgcatta
     3961 gaattttata aaacttaaaa ttaatatcgc taataaataa ttcggcatct atttctattt
     4021 caggaacaag catatcctcc gaaatatgtt tatcagcata atcctgaaac ttactaataa
     4081 attcatcaag attttcaggc ttaagggcaa ggcctgcggc gtatttgtgt ccgccgaagt
     4141 tttcaagaag atggcttgtt gaatctattg catcataaat atcaaaattt ttgacagatc
     4201 tggccgatcc agaaagtatt ccatctgctt ttgttagtac aattgttggt cgataatagc
     4261 tgtcaattag acgagatgca acaatcccga caacaccctt gtgccaatta tcattataaa
     4321 ctattgttgc ttttttattg ttaatgtttt tgtcttcatt gagaatctgt aatgcttctt
     4381 tggtaatatt actgtcgagc tctcgacggg ttgtattcaa atcattaatt tgtttgccta
     4441 gtttctcggc gtattctata ttgttgctga tcaacaatcg tactgaatct gtggcacttt
     4501 caattctgcc agcagcatta atccttggac caagcaaaaa taccagatca ctaacagtaa
     4561 ttttcttttt aaaatattgg tcttctccca ggctcatttt tttgccgaca cctgcagatt
     4621 taagcaatga tttaactcca atacgtggct ctttattcag attctttaaa ccgaaataag
     4681 aaagtgttct gttttcacca accatggtaa ctacatcagc agcaatactt attgccacaa
     4741 gatcgaggca cgagtaaatc ttttcaacag gtatctcaga tcgaatcgaa agtgcctgaa
     4801 ttaatttaaa cccaactcct gctcctgaca attctttaaa gggatagtta cagtcgggtt
     4861 gtttggggtc aagaacggct actgcatcag gaataatttc accgggtcga tgatgatcgc
     4921 aaattataat gtcaagacct ttcttctttg catagtcaac cttttcaaca gccttaatac
     4981 cacagtcgag agaaattaga agtttatatc catgttcaac agcataatca attccaatat
     5041 aggatatacc gtacccttct ttatatctat cgggaatata aaaatcaact tttttgtgag
     5101 tgtttttcaa atatgaataa actatactta ctgctgtagt tccatctaca tcataatcac
     5161 cgtaaaccat aattttttca cccgtggttt tggctgagat tacccgttca acagctttgt
     5221 ccatatcctt catcaggaat ggatccaata gatcagtaag ttgtggtcga aaaaaagact
     5281 tagcatcttt ataggtagta atccctcgga aaattagtaa tgtggtaagt atagtattta
     5341 tattaagctc tttggatagc cgctcaacta cctcgtgatc aggtttttct ctaagcaccc
     5401 atcgcttttt catagcttac tttctttgga gtgtaaagat agctaaatat caactaaaat
     5461 tccgacgagc caaagctatt gatcgcctta aatctgttta ttgctttaac taaaacacaa
     5521 tcaactagtt ttaatttttt gttaattgaa tttttattga ttggaaaact aataatgtgt
     5581 attttcagtt atttattatc aattatatat ccattgagct tcacgatagg tacattgcaa
     5641 ttgaaacacc aataaaagtt ccaattacat accctagtat tccgacaagg atgccggtgt
     5701 aactagtttt tttcgtcccg tggatgccgc cattggtg
//
LOCUS       DASCQP010000254         2304 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000954726, whole genome shotgun sequence.
ACCESSION   DASCQP010000254 DASCQP010000000
VERSION     DASCQP010000254.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2304)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2304)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2304
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000954726"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..446)
                     /locus_tag="QF480_04285"
     CDS             complement(<1..446)
                     /locus_tag="QF480_04285"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HJN05810.1"
                     /translation="MKILMVLDHEFPPDPRVENEINSLTKAGHEIILACYTLQNRPTC
                     EKSGSTNIYRKPISKFIYKSSVGILKFPFYFNFWKSFLDSLSETLEFDAIHIHDLPLA
                     KIGYEFAKKHNIPFVLDLHENWPSLLETSEHANTFLGKILSTNKQW"
     gene            complement(717..972)
                     /locus_tag="QF480_04290"
                     /pseudo
     CDS             complement(717..972)
                     /locus_tag="QF480_04290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008186715.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="integrase core domain-containing protein"
     gene            complement(1015..2031)
                     /gene="murB"
                     /locus_tag="QF480_04295"
     CDS             complement(1015..2031)
                     /gene="murB"
                     /locus_tag="QF480_04295"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: protein motif:HMM:NF000755.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008762 - UDP-N-acetylmuramate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HJN05811.1"
                     /translation="MIIHKDFSLNPYNTFGLDIVANRLAIISTVDDLHALYDNGELNK
                     SKILILSKGSNILFRGHVTGLVLLNEIQGKEVIDEDEENIFLKVSAGESWTDLVDFTV
                     KNGWGGLENMTDIPGMVGAAPIQNIGAYGAELKDVMVNLEAFDLLTGKIVEFTNSDCN
                     FGYRSSIFKTTHKNRYFITNVIIKLSKEPKINLSYKPLAEGFAGKLVNEVTIKDVSRK
                     ISEIRNSKLPDPDKFNNAGSFFKNPLVNNNKLKNLKLVYSSIPSYPADNKYHKVPAAW
                     LIEQCGWKGKRIGNVGVYEKQALVLINYGNATGKEILEFANSIQQSVYKKFGVSLEFE
                     VNVV"
     gene            2125..>2304
                     /locus_tag="QF480_04300"
     CDS             2125..>2304
                     /locus_tag="QF480_04300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05812.1"
                     /translation="MRKKVIVSVINDLVTDQRVNKVCQTLLTMNCDVLLIGRKMRNSP
                     ELENRDYAYHRMKLMF"
BASE COUNT          732 a          424 c          335 g          813 t
ORIGIN      
        1 ctccattgtt tatttgttga cagaatcttc ccaagaaatg tattcgcatg ctccgatgtt
       61 tcaagcaatg atggccagtt ttcatgtaga tcaaggacaa atgggatgtt gtgctttttg
      121 gcaaactcat aaccaatctt agccaggggt agatcatgaa tatgtatcgc atcgaattcg
      181 agagtttctg ataagctatc taaaaaagat ttccaaaaat tgaaatagaa tggaaatttt
      241 agaatcccaa cactcgactt atatatgaat tttgagatgg gttttctgta tatattggtt
      301 gatcctgatt tttcacaggt aggcctattt tgtaaagtgt aacacgcaag aattatttcg
      361 tgccctgcct ttgttaacga attaatttca ttctcgactc ttgggtctgg tggaaattca
      421 tgatcgagaa ccattaaaat cttcatagta tactacttac ataaagaatt atagattaca
      481 tctactattc gttcagatgc ctttccatcc caatattcag gaatacttcc aacttttact
      541 tgaccaatct attttacacc atacctagtt ggataaatgt ttgtcaaagt taagagatac
      601 tttttacatt cctaagttta atttcaatca aaatattgtt gataataatt agctgatgta
      661 atgttgctaa cttttagctt tagtgttaaa aaaggtttca atatttcaat agcattctac
      721 acatcttcta ttatgcattt taaagcttca tatggtattt tcccgtcaaa tgctgtgagg
      781 tcgattgaaa ttataaaaat actcccaact ctttaactgt tcatctaaat caatatcatc
      841 agtgtaggat aatagttgat aaaattcatc tttatcagtt agatgagatc tttcgacttt
      901 accattaagt tggggagttc tagctttaat atatacatcc ctcatcccat tatcttcaac
      961 atgccagtgg aacagtagct ctcattaggt agtattattc tttaccacaa aaaactaaac
     1021 cacattcacc tcaaattcaa gacttacacc aaacttttta tatacacttt gttgaattga
     1081 attggcaaac tcaagaattt cttttccggt ggcattacca taattaatca gaactagcgc
     1141 ttgtttttca taaacaccaa cgtttcctat tctctttcct ttccatccac attgctctat
     1201 taaccatgct gctggcacct tgtggtactt attatcagcc ggatatgaag gaatggatga
     1261 ataaactaat tttaaatttt ttaatttatt attgttaact aatgggttct taaaaaaact
     1321 tcctgcattg ttgaatttat caggatcagg caactttgaa tttcttattt cagagatctt
     1381 ccggctaaca tcctttattg ttacttcatt tactaattta cctgcaaacc cttctgccag
     1441 aggcttataa ctcaaattaa tttttggttc tttagataat ttgattatta catttgtaat
     1501 aaaataccta tttttatggg tagttttaaa gatgctactc ctgtaaccaa aattacaatc
     1561 gctgttggtg aactcaacaa tttttcccgt aagcaaatca aatgcttcga ggttaaccat
     1621 aacatccttt aattcagctc catatgctcc aatattttga attggagcag caccaaccat
     1681 gccaggtata tcagtcatat tttcaagtcc accccaacca tttttaactg taaagtccac
     1741 taaatctgtc cacgactcac cagcagaaac tttaagaaat atattctcct catcctcatc
     1801 aattacttct ttaccctgaa tttcatttag caggactaaa cctgttacat gtcctctaaa
     1861 aagtatatta cttcctttgc ttagtataag tatcttgctt ttattcaatt ccccattatc
     1921 ataaagcgca tgtagatcat ccactgtaga aattatcgcg agacggtttg cgacaatatc
     1981 gagcccgaaa gtattgtatg gatttaagct aaaatcttta tgaataatca ttatgtttca
     2041 aaaatagtaa aatgatgcaa taaaacttat aatagaatgt tattcatcaa aagtcactaa
     2101 gtttacactt ttcaaacaca tatattgcgc aaaaaagtaa ttgtttcggt aataaatgat
     2161 ttggtaactg atcagcgtgt aaataaagtc tgccagacgc tgttgacaat gaattgtgat
     2221 gtgttactca ttggtagaaa gatgcgcaat agtcctgaac tagagaatag agactatgct
     2281 tatcaccgga tgaaattaat gttt
//
LOCUS       DASCQP010000255         2552 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000958103, whole genome shotgun sequence.
ACCESSION   DASCQP010000255 DASCQP010000000
VERSION     DASCQP010000255.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2552)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2552)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2552
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000958103"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1166
                     /locus_tag="QF480_04305"
     CDS             <1..1166
                     /locus_tag="QF480_04305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005808160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HJN05813.1"
                     /translation="YRKKSRKPIVEKGSLSDDQNRRDFTINALSLSLQKDSYGELLDP
                     FNGVEDIENKIIRTPLDSDITFSDDPLRMMRAIRFATQLNFSIEKNTFDAISRNKARI
                     NIVSPERIIDEFNLILMTAKPSEGLKLLEETGLLKIIFPKLADLQGVEIINKHGHKDV
                     FYHTLQVLDNLAKKSDDLWLRWSALLHDIAKPVTKRYSPDTGWTFHGHEFIGAKMIPG
                     IFKSLKLPLNEKMRYVQKMVQLHLRPIVLAQDIVTDSAIRRLLFDAGNEIEDLMLLCD
                     ADITSKNEKKVKQYLTNFQLVRKKLKEVEEKDNIRNWQPPITGEVIMETFGLGPSKTV
                     GIIKDIIRDAILDGIINNNYDDAYNLLLEIGKKKKLRMVKKVDEPDNQIKLQD"
     gene            1206..2123
                     /gene="miaA"
                     /locus_tag="QF480_04310"
     CDS             1206..2123
                     /gene="miaA"
                     /locus_tag="QF480_04310"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008861746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0052381 - tRNA dimethylallyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HJN05814.1"
                     /translation="MTPLSKFTGKLIVVEGPTASGKTDIAIELASYFGAEIISADSRQ
                     FYKELPIGTAAPTSIQRNKVPHHFVAMLSVADDYNVSRFEHDVLDLLVNKFANAPLVI
                     MVGGSGLYIDAVCNGIDILPDIEDSIRNDAKSNYETRGIKGLQEKLYQLDPVYYQEVD
                     LNNPARLLRAIEVCLQTGEPYSKLRKNKPQTRSFDIIKIGIRVPREILVDRINNRVDE
                     MIKNGWIEEAKSVYPFKDNNSLNTVGYKELFAYFEKRLTFDQAIEKIKTNTRRYAKRQ
                     MTWFRKDKEIQWFDHDNLNGMVDFVKTKL"
     gene            2326..>2552
                     /locus_tag="QF480_04315"
     CDS             2326..>2552
                     /locus_tag="QF480_04315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05815.1"
                     /translation="MRKISITFIIFFLFVSAALATHQRAAEITYKHLYGLTYEFTITM
                     YTKTSSFADDSRIVMPISWGDGTGDEIPRIY"
BASE COUNT          870 a          390 c          491 g          801 t
ORIGIN      
        1 cctaccgaaa aaaatcaagg aaaccaattg ttgaaaaggg atcattgtcg gatgatcaaa
       61 atagacgcga tttcacaata aatgctttgt cattaagcct tcaaaaggat tcttatggag
      121 aattgctgga tcctttcaat ggagttgagg atattgaaaa taagataata cgtacacctt
      181 tagattctga tattactttt tctgatgatc ctttgcgcat gatgcgtgca attagatttg
      241 ccacccaatt gaatttcagt atcgaaaaaa atacctttga tgcaatttcc agaaataaag
      301 caaggatcaa tattgtttct cccgagagaa taattgatga gtttaacctg attcttatga
      361 ccgctaaacc ttccgagggt ttgaaattac ttgaagaaac cggtttgttg aaaattattt
      421 tcccaaaact agctgaccta cagggtgtag agataatcaa taagcatggt cataaggatg
      481 ttttttacca tacattacaa gtgctagata atctagctaa gaaatctgat gacctttggt
      541 tgcgttggag tgctttattg cacgatatcg caaaaccggt tactaaaaga tatagtcctg
      601 ataccggatg gacatttcac ggacacgagt ttataggtgc taagatgatt cccggaatat
      661 ttaaaagttt aaagcttccg ttaaacgaaa aaatgcgtta tgttcaaaaa atggttcagc
      721 ttcatttacg tccgattgtg ttagcacaag acattgttac cgattctgct attcggcgat
      781 tattgtttga tgccgggaat gaaattgaag atctgatgtt gctttgtgat gctgatatta
      841 cttctaaaaa tgaaaaaaaa gtaaaacaat atcttactaa ttttcagctt gtaagaaaaa
      901 aactcaaaga ggttgaagaa aaagataata ttagaaactg gcaaccgcct attactggtg
      961 aggttattat ggaaactttt ggattaggtc cttcaaaaac tgttggaatt attaaggata
     1021 ttatccgtga tgcaatactt gatggaatta ttaataataa ctacgatgat gcatacaacc
     1081 tgctgcttga aatcgggaaa aagaaaaagc tgaggatggt aaagaaagtt gatgaaccgg
     1141 ataatcaaat taaactacaa gattgaattc tttgcaactc ttaggttgtt aataacaaat
     1201 caataatgac tcccttatca aaattcactg gcaaactcat agttgttgaa ggccctacag
     1261 cttcaggaaa gacagatatt gccattgaac ttgctagcta ttttggggct gaaattattt
     1321 cagccgattc acggcagttt tataaagaat taccaatagg tactgctgcc cccacctcaa
     1381 tccaacgaaa taaagttcca caccattttg ttgctatgtt gtcggttgct gatgattata
     1441 atgtgtcaag atttgaacac gatgtgcttg atttgttagt taataagttt gctaatgcac
     1501 ctcttgttat aatggtagga ggttcaggtt tatatattga tgctgtttgc aatggtatcg
     1561 atattcttcc tgatattgag gactcaattc ggaatgatgc aaaaagtaac tacgaaaccc
     1621 ggggaataaa aggtttgcag gaaaagttgt atcaacttga tcctgtatat tatcaagaag
     1681 ttgacctgaa taatccagca cgattgctac gggccatcga agtttgtttg caaaccggag
     1741 agccgtattc taagttgaga aaaaacaaac cacaaacaag gagttttgat attattaaaa
     1801 ttggaattag agtaccacgt gagattctcg ttgatagaat aaacaaccga gttgatgaaa
     1861 tgataaaaaa tggttggatt gaagaggcaa aatcggttta tccctttaaa gataataact
     1921 ctttaaacac agtaggctat aaggagttgt ttgcctattt cgagaaaaga ttaacatttg
     1981 atcaggctat tgaaaaaatt aagacaaaca cacggagata tgctaaaagg caaatgacct
     2041 ggtttagaaa agataaggaa attcaatggt ttgatcatga caatcttaat gggatggtgg
     2101 attttgtcaa gacaaagtta taactagtat attaattggt tatatgtact catactatca
     2161 ggctaatata gtaacgtgac atattagtaa taaagacatc caataacaaa acaactacag
     2221 caacaataaa aatgtctaac ttttagtttt ctttgtcaaa cgataggata atttggcatt
     2281 ggatttgctt tttgttgtag ttttgaattt atacttatta agtccatgag gaagatatca
     2341 atcacgttta ttatcttttt tctttttgtt tcagcagcac ttgcaacaca tcagcgagcc
     2401 gctgaaatta catataaaca tttgtatgga ttaacttatg agtttacgat taccatgtat
     2461 acaaaaacct ctagttttgc tgatgattct agaattgtaa tgcctatttc ctggggtgat
     2521 ggaacaggtg atgagattcc aagaatctat tt
//
LOCUS       DASCQP010000256         3069 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000958155, whole genome shotgun sequence.
ACCESSION   DASCQP010000256 DASCQP010000000
VERSION     DASCQP010000256.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3069)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3069)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3069
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000958155"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..441)
                     /locus_tag="QF480_04320"
     CDS             complement(<1..441)
                     /locus_tag="QF480_04320"
                     /inference="COORDINATES: protein motif:HMM:NF026220.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YCF48-related protein"
                     /protein_id="HJN05816.1"
                     /translation="MNKAVFKILLFIIFLQVQTYCFAQGSWEQIEVPTQQFLRSVYFT
                     DSLTGWAVGDSGIIVHTMDGGGNWMIQESNTANDIVDVFFLNSQLGWASSFNYSTPPY
                     GTLLLKTTNGGIDWIGETYPVENIFMTCIFFLDSLVGWMGGIPHA"
     gene            585..929
                     /locus_tag="QF480_04325"
     CDS             585..929
                     /locus_tag="QF480_04325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05817.1"
                     /translation="MKKIIVLLIIVFACYIGYSQIYVGDININKRKGTNYVELVGITK
                     NFETLVHVDYGQAKPKAQEIRDKDGAIARSASIISALNLMTKNGWEFVNSYGYGTNDE
                     NVVRYLLKKKEK"
     gene            complement(1183..1515)
                     /locus_tag="QF480_04330"
     CDS             complement(1183..1515)
                     /locus_tag="QF480_04330"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: protein motif:HMM:NF013222.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MGMT family protein"
                     /protein_id="HJN05818.1"
                     /translation="MEKGFFQQVYDVALQIPFGKVTSYGAIAEYLGSKGSARMVGWAM
                     NSSKNLPQNLPAHRVVNRNGLLTGKQHFGGKDIMADLLRSEGLIVEENKIIDFDKYFW
                     DPSLELKM"
     gene            complement(1527..2201)
                     /gene="trmB"
                     /locus_tag="QF480_04335"
     CDS             complement(1527..2201)
                     /gene="trmB"
                     /locus_tag="QF480_04335"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: protein motif:HMM:NF001080.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008176 - tRNA
                     (guanine(46)-N7)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HJN05819.1"
                     /translation="MSKKNKLYRFAENETFDNMFQLAYEDVIDGFELRDNWTSNFFKN
                     NNNLIIELGCGKGEYTTGLAQMFPANNFIGIDIKGARIWRGLVTSDDRSLKNVAFIRS
                     RINLIEYFFGNNEVSEIWITFPDPHPSRIKEKRRLTSPQFLNRYYKILKTDGVIHLKT
                     DNIIFFEYTMDVIRDHGHDLLYTTYDVYGEENDKALTQIQTFYEKKWLNRGTKIKYLK
                     FKLIPL"
     gene            complement(2220..>3069)
                     /locus_tag="QF480_04340"
     CDS             complement(2220..>3069)
                     /locus_tag="QF480_04340"
                     /inference="COORDINATES: protein motif:HMM:NF016895.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HJN05820.1"
                     /translation="VSPAIRRETDEEKVRKVVKSAFDKSSTRKKPKDRKIKIEKKVKL
                     DGGRKMHAKRRKSALTNQLTFLLVVVLAMGVGYMYMQREALQIYFDKYSSHIPFFYSS
                     VNDYLSENINSSHVAELSRSTASFFPFFLKTEDTTTIEEDANPANQLNTEIVDITEEE
                     NLNEDNSEQPLILDDEIIEEFVDNSSPKENVEVAKNIEKIPVEKVLTTDRFFIIAGSF
                     SNETNAKRLVTKLNNKGYSALIADTNKYGMFRVAIMKFNNRVSAENNLMAIRNEENPQ
                     AWLLVK"
BASE COUNT          988 a          557 c          461 g         1063 t
ORIGIN      
        1 tgcatgcgga ataccgccca tccatccaac aagtgaatcc aaaaagaaaa tacatgtcat
       61 gaaaatattc tcaacagggt aagtttcacc aatccaatca atacctccat tagtagtttt
      121 gagcaacaaa gttccataag gcggtgttga ataattgaat gaagatgccc atcccaactg
      181 gctgttaaga aaaaaaacat caacaatatc attcgctgta ttactttctt gtatcatcca
      241 gttacctcca ccatccatag tatgcactat gattccagaa tctccaacag cccatccggt
      301 taaactgtct gtgaaataaa cagatcttaa aaattgctgt gttggaactt cgatttgttc
      361 ccagctaccc tgagcaaaac aataggtttg aacttgaagg aaaataataa atagtaatat
      421 tttgaagaca gctttattca atgttgaaaa ttgttattgt gattttaatc caatcaaatg
      481 caaaattaat aaagtagcat atcaaaaaac aatatagtgt catttcgtcc tttatgctat
      541 gaatttccta tttttggatt ataaatcaca aatagccaaa taaaatgaaa aaaattatcg
      601 tattactcat tattgttttt gcatgctaca taggatactc gcagatatat gttggtgata
      661 ttaacataaa taagagaaaa ggcaccaatt atgtagagtt ggttggcatt accaaaaact
      721 tcgaaacgtt agttcatgtg gattatggcc aggcaaaacc caaagcacaa gaaattagag
      781 ataaagatgg ggcaattgcc cgatcagcaa gtattatttc tgccttgaac ctcatgacta
      841 aaaacggttg ggaatttgta aatagttatg gttatggcac caatgatgag aatgttgtta
      901 gatacttgtt aaagaaaaag gagaagtaac ttcatattat tttctgctaa aaccgcttta
      961 taagattaag atatagtctg ttgtagttat tcttggtctc gaaaatacct ttgtaagcaa
     1021 tagacaacga cagttttttc atgttagtat gcatcaaata ttaggcgttg taatatacaa
     1081 ctttaaaact aaatgttagg tgtttgtctc atcaggatca ttcataataa agacgatgaa
     1141 ccattataag gctgcggaaa attagtgttt gagttatgga ccttacattt ttaactccaa
     1201 tgaaggatcc caaaagtact tgtcaaaatc tataatttta ttttcctcaa caatcaaccc
     1261 ttcactccta agcaagtcag ccataatatc cttgccgcca aaatgttgtt ttccggtaag
     1321 taatccattt ctatttacaa ctctatgagc gggtagattt tgaggtaagt ttttagatga
     1381 attcattgcc cagccaacca tacgtgccga tcctttactt cctagatatt ctgcaatagc
     1441 accataggaa gtaacttttc caaaaggaat ttgaagagct acatcatata cttgttgaaa
     1501 gaaacctttt tccattttca aattagttat aaaggtatta acttaaactt caaatactta
     1561 atttttgttc cacgattaag ccactttttt tcatagaacg tttgaatttg agtaagggct
     1621 ttatcatttt cttctccata aacatcatat gtagtatata ataagtcatg gccgtgatct
     1681 ctaatcacat ccatcgtgta ttcaaaaaaa ataatattat ctgtctttaa atgaataact
     1741 ccatcagttt ttaagatctt gtaatatcta ttcagaaact gaggtgatgt caatctcctt
     1801 ttttctttaa ttctactagg atgaggatca gggaaggtaa tccatatttc tgatacttcg
     1861 ttgttaccaa aaaaatattc aatgaggtta attcttgaac ggataaatgc tacatttttt
     1921 aaacttctgt catctgatgt aaccaatcca cgccagatac gagctccctt aatatctata
     1981 ccaataaaat tattagctgg aaacatttgt gccaatcctg tcgtatattc tccttttcca
     2041 catcctaact caattatcag gttattgtta ttcttgaaaa aattacttgt ccagttatct
     2101 cttagctcaa atccatcaat aacatcttcg tatgccaatt gaaacatatt gtcgaaagtt
     2161 tcattttcgg caaaacgata aagcttattt tttttactca ctttagggaa aaatttagcc
     2221 tattttacaa gtagccaggc ctgtggattt tcttcgttac gaattgccat aaggttgttt
     2281 tcagctgaaa cgcgattgtt aaatttcata atggcaactc tgaacattcc gtacttgttt
     2341 gtatcagcaa ttaatgcact atatccttta ttattgagct tggttaccaa tcgcttggcg
     2401 tttgtttcat ttgaaaatga accggcaatt ataaagaacc tatctgtggt aagaactttc
     2461 tcgacaggaa tcttttctat attcttggca acctcaacat tttcttttgg actggaatta
     2521 tcaacaaact cctcaattat ttcatcatcc agtattaaag gctgttcact attgtcttcg
     2581 tttaaatttt cttcttcagt aatgtcaact atttcagtat ttaactgatt tgcaggatta
     2641 gcatcttctt ctattgtcgt agtgtcttct gtcttaagaa aaaatgggaa aaatgaagct
     2701 gtacttcggc tcaattcagc tacgtggctt gaattgatat tctctgacaa ataatcattt
     2761 acgcttgaat agaaaaatgg aatatgtgat gaatatttat caaaataaat ttgcaaagct
     2821 tctctttgca tatacatata gccgactccc attgccaaaa caactactaa taaaaaggtt
     2881 aattggttag taagcgctga tttccttctc ttagcatgca tcttcctccc accatccagt
     2941 ttaaccttct tttcaatttt aatttttcta tcctttggtt tttttctagt actacttttg
     3001 tcaaatgctg actttacaac ttttctgact ttttcctcat ctgtttctct tcttatagca
     3061 ggagaaact
//
LOCUS       DASCQP010000257         2450 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000958880, whole genome shotgun sequence.
ACCESSION   DASCQP010000257 DASCQP010000000
VERSION     DASCQP010000257.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2450)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2450)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2450
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000958880"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..391
                     /locus_tag="QF480_04345"
     CDS             <1..391
                     /locus_tag="QF480_04345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018696405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HJN05821.1"
                     /translation="GEPFMLTHYAKLIFNSNELPKDVEHTTAYFRRFLIIPFDVTIPE
                     DEQDKQLHTKIIDSELSGVFNWVLDGLSRLLSQKRFTHCEAVKDAIELYKNQSDSAKM
                     FLQEYDYSKSANESILIKELYIDYRAF"
     gene            438..770
                     /locus_tag="QF480_04350"
     CDS             438..770
                     /locus_tag="QF480_04350"
                     /inference="COORDINATES: protein motif:HMM:NF012488.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HJN05822.1"
                     /translation="MIAQHEEELATLLVDFLNQRDGITIIGENSPDRSIRVPTISFTV
                     ANRKSSEIPLLVDRYKVGIRWGDFYARRLINDLNLSDNDGVIRISAVHYNTLAEIEYT
                     IEVLDSIL"
     gene            complement(777..1781)
                     /locus_tag="QF480_04355"
     CDS             complement(777..1781)
                     /locus_tag="QF480_04355"
                     /inference="COORDINATES: protein motif:HMM:NF018024.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1028 domain-containing protein"
                     /protein_id="HJN05823.1"
                     /translation="MKARIPITLCLIVLCVLNIQSQDTFSIVAIDTVTGEVGSAGASC
                     VNLNSWPGMSDDFLGELFPDIGAINTQAYYHQTNQANARNRMNLGDTPSQIIQWLVDN
                     DVSGQPQLRQYGIVAFVDGSPESAAHTGVATDDYKNHVLGRNYSIQGNILLGQIVLDS
                     MESNFINADGDLACKLMAALQGANMIGADTRCASNGSSSLFAFLKVAQPDDEFGDPSF
                     LVSLRTVNGDGIEPIDSLQVLFDAAHTCTTTDIIAKEKFDSHFLLYPNPVEDVVNIEV
                     LKAGNYELEIVDIMGNQISSINFEDDIELDISFLPDGIYFVRISNKEQSFITKIIKAD
                     "
     gene            1961..>2450
                     /locus_tag="QF480_04360"
     CDS             1961..>2450
                     /locus_tag="QF480_04360"
                     /inference="COORDINATES: protein motif:HMM:NF025046.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4149 domain-containing protein"
                     /protein_id="HJN05824.1"
                     /translation="MQNPTLQIILDFLHLMATIAWIGGMFFNFLVVMPTVAKALDPQT
                     TGKFMGMLFKRVRVVVYTSLIILFVTGIPMKIANELYVGVISFGNTWELIGFIKHICV
                     GILALLAIYSFEILFPKVSKLAKEGPSPKLNGLKKQQITIGSISFLFGIVIIFLSAMM
                     NYM"
BASE COUNT          795 a          439 c          414 g          802 t
ORIGIN      
        1 tggcgaacca ttcatgttga cacattatgc aaagctaatt tttaacagta atgagttacc
       61 aaaggatgtt gaacatacta ctgcatattt cagaagattt ctgattattc catttgatgt
      121 aactattccg gaggatgaac aagataaaca gttgcacacg aagattattg atagtgaact
      181 gtcaggagta tttaactggg tactggatgg cctaagccgt ttgttatcac aaaaaaggtt
      241 tacccattgt gaggctgtta aagatgcaat tgaactatat aaaaatcaat ccgatagtgc
      301 taaaatgttt ctacaggaat acgattatag taaaagtgca aacgaaagta ttttaatcaa
      361 ggaactatat atcgattaca gagcattttg atgaagcatc cctcccaccg ttttcaaaat
      421 atgaaaaggt atttgatttg attgcacaac atgaagaaga gttagcaaca cttcttgttg
      481 atttcctgaa ccaaagagat gggattacta taattggaga aaattctcca gatcgttcaa
      541 ttagggttcc aacaatatca tttacagttg cgaacagaaa aagcagtgaa attccattac
      601 ttgtggacag gtataaagta ggtatccggt ggggagattt ttatgcaaga cgtctgatta
      661 acgatttgaa cctatcagat aacgatggag tcatcaggat aagtgcggtt cattataata
      721 cgttagcgga aatcgaatat actattgaag tactcgatag tattctttag ctcaatctaa
      781 tcagccttga taatttttgt aataaacgat tgctctttat ttgatatccg aacaaaataa
      841 attccatcgg gtagaaagga tatatctagc tcaatatcat cttcaaaatt tatactagaa
      901 atttggtttc ccattatatc gacaatttcg agttcgtaat ttcccgcttt aagaacctct
      961 atattgacaa catcttcaac tggatttgga taaagtaaaa agtgcgaatc aaacttctct
     1021 ttggcgatta tatcagttgt tgtacaagtg tgagcagcat caaataaaac ttgcagcgaa
     1081 tcaataggct caatcccatc accatttact gttcttaacg agaccagaaa cgatgggtct
     1141 ccaaattcat catcaggttg tgccaccttt aaaaacgcaa ataatgaaga tgaaccattt
     1201 gaagcacatc tggtatctgc tccaatcata tttgcacctt gtaaagcagc cattaatttg
     1261 caagcaaggt caccatctgc atttataaaa tttgattcca tagaatccag tacaatttga
     1321 cccagtagga tatttccctg aatggaataa ttacgaccaa gtacatgatt cttataatca
     1381 tccgttgcaa caccagtatg tgctgccgat tcaggtgatc catcaacaaa tgcaacaata
     1441 ccgtactgcc ttaactgtgg ttggccacta acatcgttat caactaacca ttgaatgatc
     1501 tgacttggag tatcacccag gttcattcta tttctggcgt tagcctgatt tgtttgatga
     1561 taataagctt gtgtgttaat tgcaccaata tctggaaata attctcccag aaaatcatca
     1621 ctcattccag gccaactgtt taaattaaca catgaggcgc cagcgctgcc tacttcacca
     1681 gtaactgtat caattgctac aatagagaat gtatcctgac tctgtatatt caaaacacac
     1741 aatactatca agcacaatgt tattggtatt cttgctttca tttctctgag tattacaatt
     1801 gaatattata gaaatcaatt ctctaacaaa tgtagttata attatcctac tctagttttt
     1861 cgacaatatt attattattc atttccaaga ggttgcaatt ctcaaatcta atagtttgaa
     1921 attttttgta ttttcgacat ctaaccaaaa cacactagtt atgcaaaatc ctactttaca
     1981 gattattctt gattttttgc acctgatggc tactattgcc tggattggtg gaatgttttt
     2041 taatttttta gttgtaatgc caaccgttgc caaggcacta gaccctcaaa ctactggaaa
     2101 atttatgggt atgttgttta aacgtgtcag ggtagttgtt tatacatccc tgataattct
     2161 gtttgtaaca ggaattccaa tgaaaattgc aaacgagtta tatgtgggag taataagctt
     2221 tggcaatacc tgggaattaa ttggctttat taaacatata tgtgttggca tacttgcact
     2281 attagctatc tattcttttg aaattctttt tcctaaggtt tcaaaactgg caaaggaagg
     2341 tccatctcct aaattgaatg gacttaaaaa acaacaaata acaataggct ctatctcttt
     2401 cctatttggt attgttatta ttttcctatc cgccatgatg aattatatgt
//
LOCUS       DASCQP010000258         3768 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000961017, whole genome shotgun sequence.
ACCESSION   DASCQP010000258 DASCQP010000000
VERSION     DASCQP010000258.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3768)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3768)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3768
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000961017"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1891)
                     /locus_tag="QF480_04365"
     CDS             complement(<1..1891)
                     /locus_tag="QF480_04365"
                     /inference="COORDINATES: protein motif:HMM:NF015515.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC family protein"
                     /protein_id="HJN05825.1"
                     /translation="MRLLLISVFLLLVNISCFSNETDVLTNQNLEVDFPEIIVKGVQQ
                     TIDIRITDEELANSFNYKKIDVLLSGEIVATVVKNGSITIPYTFDKQEILTISIGNFT
                     QSEPVNPIPLWMSVLPPLIAILIALIIREVYTALFVGIWVGTAIIYYYKGSWFLLAIF
                     KGFLAILDTYIIQSLNNSGHLAIILFTMIIAATVSLISRNGGMKGVVNRLSKYATDPR
                     SGSFITWLLGIVIFFDDYANTLVVGNTMRPLTDKLRISREKLSYIIDSTAAPVASVAF
                     VTTWIGAELSYIQDGINTLNLNESAYSVFFNSLAYSFYPFFTLAFILILIWKNVDYGP
                     MYKAERLARRRGALAVNTDSIDAEISYDLVEEISAKKGVTPRSVNAVIPILVIIFGML
                     SALLYTGWNQEIWNKNSLSFFEKLSETIGSSDSYISLLWASLASLFAALILTLSQRLL
                     SLKDTVESIIQGFKTMLPAIMILTLAWAVALLTEHLHTADFISGLLMDASISPYLIPV
                     ITFVVAALVSFSTGSSWGTMAILYPLILPAGWLLAEKSGLNYETTLSIFHNVAAAVLT
                     GSVLGDHCSPISDTTILSSLASSCPHIEHVRTQLPYALTTGAVAIFLGTLPASYGISS
                     WILFPI"
     gene            complement(1996..3165)
                     /locus_tag="QF480_04370"
     CDS             complement(1996..3165)
                     /locus_tag="QF480_04370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05826.1"
                     /translation="MTYDKNLPASLNPYYSFIYSQDRNIAGTIVDYQTRKPIEGVQIV
                     HSYSDTIIFSNKKGEFKCGEQPIHDDTLFLSHPDYYSNITVVRRNGNVHRKRIKLFPA
                     NLNTENIVVNEHQHHEIIGGKIFERNTSKPLGEVSIGIGGKVYSSSNNSGSFSIIIPA
                     STPEIIFAHPDFNTDTLSITRKRINNTKIEVIMNRVVFSKEDTLWLTYKNLIGVAVNE
                     FINGGIGVRYQRFLKVNHAVGVHNSYYYNGTGVNFYTKDNSYTGIKIAPYYRFYSPRK
                     VRNGIYVEAKFITGYFDFDALYYGSKADNRRGETFKEKFWSFGFGVGGGWYNFLRRSN
                     HFVFNLYAGIQYLPMNVSKTKSTDQYKNLEGQRGWWYFYGPGSVVEIKLMFSGLF"
     gene            complement(3221..>3768)
                     /locus_tag="QF480_04375"
     CDS             complement(3221..>3768)
                     /locus_tag="QF480_04375"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018711230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="rRNA adenine dimethyltransferase family protein"
                     /protein_id="HJN05827.1"
                     /translation="INIIEADFLRINIDNIYASPFALIGNFPYNISSQILFKVLENRN
                     RIPLVICMIQKEVAERISSPFGNKTYGILSVLLQSWYNIEYCFTVNENVFFPPPKVKS
                     AVIRLKRNSFEKLDCNEKLFFTTVKTAFNHRRKTLRNALRPLLPNIQQSDHKFFSLRA
                     EQLSPEQFVELTNVVEKKLSE"
BASE COUNT         1250 a          670 c          637 g         1211 t
ORIGIN      
        1 caattgggaa caatatccat gatgaaattc cgtatgaagc tggaagtgtt cccaagaata
       61 ttgcaacagc tcccgttgtt aatgcatatg gaagctgagt acgaacatgt tcaatatgtg
      121 ggcaggagct ggctaatgag cttaatatag ttgtatcgga aataggagaa cagtgatcac
      181 ctaatacaga accagttagt acagctgcgg ctacgttatg aaaaattgaa agggtggttt
      241 cataattgag tcctgatttt tcagctaaca gccatcctgc tggtaaaatc agaggataaa
      301 gtattgccat tgttccccac gagcttccag ttgaaaatga aactaaagcc gcaacaacaa
      361 atgttatcac cggtatcaag tatggtgaaa tggaagcatc cataagcaac cccgaaataa
      421 agtcggcagt atgcaaatgt tcagttagta aagcaaccgc ccaggccaga gtaagtatca
      481 taattgctgg aagcatagtc ttaaatccct gaattatgct ttctactgta tctttcaagc
      541 ttagcagccg ttgcgacaac gttagtatca gagcagcaaa caagcttgcc aacgatgccc
      601 acaataatga tatataagag tcggaacttc caattgtttc tgataatttt tcgaaaaagc
      661 ttagtgagtt cttattccat atttcctgat tccagcctgt ataaagtaaa gccgacagca
      721 ttccaaaaat aataaccaat atagggataa ctgcattcac acttctggga gtaacacctt
      781 tttttgccga tatttcttct actagatcat acgaaatttc tgcatcaatg gagtcagtgt
      841 ttacagctaa cgcgcctctt cgtctggcta gacgttcagc tttatacatt ggtccataat
      901 ctacattttt ccatataaga attagaataa aggcaagagt aaagaaaggg tagaatgaat
      961 atgcaagtga gttaaaaaac acactataag cagattcatt tagattaagc gtattaatcc
     1021 catcctgaat ataacttagt tcagcaccaa tccacgttgt tacaaaagca acggaggcaa
     1081 ccggtgcagc agtcgaatca attatgtatg agagtttctc gcgtgaaatc cgtaatttgt
     1141 ctgtaagggg tcgcattgta ttacctacta caagggtgtt ggcatagtca tcaaaaaaaa
     1201 taacaatccc taatagccaa gtaataaatg aacccgaacg tggatcagtg gcatatttcg
     1261 aaagtctatt tactacacct ttcatgcctc catttctgga aatcaagcta actgtagcag
     1321 ctattatcat agtaaataga ataattgcca aatgcccact attgttaagg gattggataa
     1381 tgtaagtatc taatattgct aaaaatcctt tgaaaatagc aagcaggaac cacgatcctt
     1441 tgtagtagta tataattgct gttccaaccc aaataccaac aaacaaagca gtataaacct
     1501 ctctgattat caaggcaatt aatattgcta tgagaggcgg taaaacagac atccataaag
     1561 gaattgggtt aacaggctcc gattgtgtga aattaccaat actgatagtt agtatttctt
     1621 gtttatcaaa ggtgtaagga atggttattg aaccattttt cacaactgta gctactattt
     1681 ctcctgatag gagtacatca attttcttat agttaaaact attggcaagt tcttcgtcag
     1741 ttatcctgat atcaatagtt tgctgaactc ctttaacaat aatttccggg aagtcaactt
     1801 ctaaattttg atttgtgagt acatctgttt cattagaaaa acaagaaata ttaacgagca
     1861 aaagaaatac agaaataagg agtaaacgca ttccgatttt ttaagtgtgt gaaagtaaca
     1921 aaaaagcttt aagattcaac ataaaggtaa taggatacta ctacaattga agacaaatta
     1981 ttatctttta atagcttaaa atagtccgct aaacatcagt ttaatttcta caacgctacc
     2041 aggtccataa aaataccacc aacctctctg accctccaag tttttatatt gatcggtaga
     2101 tttggttttt gatacattca ttggtaagta ttgaatacct gcataaagat tgaaaacaaa
     2161 atgatttgat ctacgtagaa aattatacca tcctccacca accccaaatc caaagctcca
     2221 aaatttctct ttaaatgttt caccacgacg attatcggct ttagacccat agtaaagagc
     2281 gtcaaaatca aaatatccag ttataaattt ggcttctaca taaattccat ttcttacttt
     2341 tcttggagaa tagaatctat aatatggggc aatttttatt cctgtgtagc tattatcttt
     2401 ggtataaaaa ttaacaccag ttccattata atagtacgaa ttatgaacgc caacggcatg
     2461 atttactttt aaaaatcttt gatatctaac gcctattccc ccattaataa attcattaac
     2521 agctacgcca ataagatttt tatatgtcaa ccagagagtg tcttctttac taaaaacaac
     2581 tctgttcatg atgacttcta ttttggtatt atttattcgc ttccgagtga ttgataatgt
     2641 atcagtgtta aaatcaggat gggcaaagat tatttcagga gttgaagccg gtataattat
     2701 tgaaaaagaa cctgaattat ttgaagatga ataaactttt ccccctatac ctattgaaac
     2761 ttctcccaat ggtttgctag tatttctttc gaatattttt cctccaataa tctcatgatg
     2821 ttgatgttca ttaacaacta tattctcagt atttaaatta gcaggaaaca acttaattct
     2881 ttttcgatgt acatttccat tccttcttac tactgtaata tttgaatagt aatcaggatg
     2941 cgataaaaaa agtgtgtcat catgaattgg ttgttctcca cacttaaatt cccccttttt
     3001 attcgaaaaa attatagtat ctgaatagga atgtactatt tgtactcctt caattggttt
     3061 tcgtgtttga taatcaacta tggttcccgc aatgtttctg tcctggctat aaatgaatga
     3121 atagtaaggg ttaagactag caggcaaatt cttatcataa gtcaaaaata gtaatattta
     3181 cattcttttt tgttattctt atgcgcaaat agctactcaa ttattcagat agctttttct
     3241 cgacaacatt tgtaagttca acaaattgct ctggtgaaag ttgttcggct ctaagtgaga
     3301 aaaacttatg atcggattgt tgaatatttg gcagaagtgg ccttaacgca tttcgcaatg
     3361 ttttacgcct gtggttgaat gcagttttta cagttgtgaa aaataatttc tcattgcaat
     3421 ccaacttttc aaatgagttt cttttcagtc gtattactgc tgattttacc tttggtgggg
     3481 gaaagaacac attctcattt acagtaaagc aatactcaat attgtaccag ctttgcaata
     3541 gtacgcttaa tataccatag gttttatttc caaagggtga ggaaatccgt tcggctactt
     3601 ctttttgtat catgcatata accagaggaa tacggtttct gttttcgaga actttgaaca
     3661 atatctgact tgaaatattg tatgggaaat tgccgataag tgcaaatggt gatgcgtaaa
     3721 tattatcaat attaatcctt agaaaatcag cttcaataat attaattc
//
LOCUS       DASCQP010000259         5035 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000961827, whole genome shotgun sequence.
ACCESSION   DASCQP010000259 DASCQP010000000
VERSION     DASCQP010000259.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 5035)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5035)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5035
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000961827"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..565)
                     /locus_tag="QF480_04380"
     CDS             complement(<1..565)
                     /locus_tag="QF480_04380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05828.1"
                     /translation="MQKKILLSLALISVTLFGIGQNAWINELHYDNVSSDVGEFVEVV
                     IENPGSYTLSDFEVYLYNGSSSSGATYSNESMNNFTVGTTVGNFTIYTWYPSSIQNGA
                     PDGLALVYQGTVISNQFLSYEGTFTATDGPANGLTSTDIGVAETSSTPIGESLQLSGS
                     GTSYPDFVWNAPAAETPGNENNGQTLGG"
     gene            complement(820..2733)
                     /gene="dnaK"
                     /locus_tag="QF480_04385"
     CDS             complement(820..2733)
                     /gene="dnaK"
                     /locus_tag="QF480_04385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008149022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HJN05829.1"
                     /translation="MGKIIGIDLGTTNSCVAVMEGNEPVVIPNSEGRRTTPSIVAFTE
                     NGERKVGDPAKRQAITNPTKTVYSIKRFMGNRFKEMTKEIERVTYKVVKGDNDTPRVK
                     IDDRLYTPQEISAMVLQKMKKTAEDYLGHTVTEAVITVPAYFDDSERQATKEAGEIAG
                     LIVKRIINEPTAAALAYGLDKKKDDSKIAVFDLGGGTFDISILELGDGVFEVKSTNGN
                     THLGGDDIDQVIIDWLAEEFKKDEGLDLKKDPMALQRLKEAAEKAKIELSSTTETEVN
                     LPYIMPVDGVPKHLVKKLTRAKFEMLANSLFQETIGPCKEALKDASLNAADIDEVILV
                     GGSTRIPAIQEIVKKIFAKDPSKGVNADEVVALGAAIQGGVLTGEVKDVLLLDVTPLT
                     LGIETMGSVMTKLIEANTTIPTKKSETFSTAADNQPSVEIHILQGERPMANQNKSIGK
                     FHLDGIPPSPRGVPQIEVTFDIDSNGILNVSAKDKATGKSQSIRIEASSGLSDEEIKK
                     MKAEAEANADADKAERERVDKLNAADALIFQTEKQLKEYGDKVPADKKSEIEGALEEL
                     RTAHKSQDITAMDVAMNKLNTIWQSASEAMYKDTQGQPGAAPEGDAGTEDTSSEKGDD
                     EVTDVDFEEVDDK"
     gene            complement(2963..3979)
                     /locus_tag="QF480_04390"
     CDS             complement(2963..3979)
                     /locus_tag="QF480_04390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05830.1"
                     /translation="MKKIIFPFLLISSLIIFNNCSTDFDIYADYKDVTIVYGLIDISD
                     DTTWVKITKAFTGPGNALLIAQNPDSSNYPYKLDVNLVGNKKGTELDPIVFDTITIHN
                     KAITDTVINEAGDTTILNPFYSPNQLVYYAVATLDKDANYTLVINKTNEQLTASSDLV
                     DDFHVGSPVNRIVFSETSDGSIKWSSTKNGKRYEVSLRFNYLELAPGYADTLRKSVDW
                     FLGIVNSKTIDGGEDLEKTYSGPGFYSLLESKLEPIPNVERWVDNVNITIACGSQVLA
                     TYLDINSAGGSLLEEVPVYSNIEGGTGVFASRHTIVKDIRLSVTTERNLIEHYNLGFK
                     FKSK"
     gene            complement(4175..>5035)
                     /locus_tag="QF480_04395"
     CDS             complement(4175..>5035)
                     /locus_tag="QF480_04395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018339643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HJN05831.1"
                     /translation="IGCSSRFPYYMNTYGIHGIHGRAAALATGIKLTNPKLSVWMISG
                     DGDSMAIGGNHFIHIARRNPDINYLMFNNKIYGLTKGQYSPTTPMGSKTKTSPQGTFE
                     HPFNPGELVIGAQGKFFARVPDTNLKLMSKIFKEAAKFKGTSIVEILENCVIFQNKIH
                     SLITSKETKEDNQLILEAGEPMLYGKDNQKGIVLDRTKLKAVDLGKDGITIDDILIHD
                     PYTTETGIHMMLASMSPPELPTAIGVIRAVKAETLEERVWKSVEHAKETSPWSSVDEL
                     LNSGNTWVIK"
BASE COUNT         1522 a         1003 c          796 g         1714 t
ORIGIN      
        1 ctccacctaa ggtctgaccg ttattttcat ttcccggggt ttctgcagct ggtgcattcc
       61 atacgaaatc aggataagat gttccggatc cagatagctg aagagattct cctatgggtg
      121 tactacttgt ctcagcaaca ccaatatcgg tagatgtgag tccattagca ggaccatcag
      181 tagcagtaaa tgttccttca tagctcaaaa attgattgct aattacggtt ccctggtata
      241 ctaaggctaa accatcagga gcaccatttt ggatacttga gggataccat gtataaatgg
      301 taaagttgcc aaccgttgtt ccaacagtga agttattcat tgattcatta ctatacgtag
      361 caccactgct actgctccca ttgtacaaat acacttcaaa atctgaaagc gtataactgc
      421 cagggttttc aattacaact tctacaaatt ctccaacatc actactcaca ttgtcatagt
      481 gaagttcatt tatccaggca ttttgcccaa ttccgaaaag agttacggat attaatgcca
      541 aactcaaaag tatttttttt tgcatagctt aaaatttaat aataattaat atttcttttg
      601 aaaaacccac ctctgtcttg aagctagatt gtagattaat aaactattaa gttataagga
      661 tattaactgc gttacaacaa aggagcatcg aaactaataa aaaaaaagtt gctttggtta
      721 aaaatcagcg ataaaattat taatagaaat taacaataac aaaaaaaggc cgtgtagaaa
      781 tattacacag cctttagaat tttgataatt attacttatc tatttatcat caacctcttc
      841 aaagtcaacg tcagttactt catcatcacc tttttcagaa cttgtgtctt ctgtacctgc
      901 atcaccttca ggtgctgctc ccggctgtcc ttgagtatct ttatacatag cctcactagc
      961 agattgccat atagtattca gcttattcat tgcaacatcc attgctgtaa tatcctggct
     1021 tttatgcgca gttctaagct cctcgagtgc tccttcaatt tcagactttt tatcagcagg
     1081 aactttatcg ccatattcct ttaactgttt ctcagtttga aatattaagg catcagctgc
     1141 attcagttta tcaactcttt cgcgttcagc tttatctgca tctgcattag cttcagcttc
     1201 tgctttcatc tttttaattt cttcatcaga caatcctgaa gaagcctcaa ttcgaatgct
     1261 ttgcgatttg ccagtagctt tgtcttttgc acttacattt aatatgccgt ttgaatcgat
     1321 atcaaaagta acttcaattt gtggaacgcc acgaggtgaa ggaggaatgc catcaagatg
     1381 gaatttacca atactcttat tttgatttgc cattggtcgt tcaccctgca atatgtggat
     1441 ctcaaccgat ggttgattat cagctgcggt tgaaaatgtc tctgatttct tagtcggtat
     1501 tgtagtgttt gcttcaatca gctttgtcat tacacttccc atagtttcaa tgccaagggt
     1561 aagtggagta acatcaagta acaatacgtc ttttacttca cccgttaata caccaccttg
     1621 aatagcagct ccaagagcaa ccacttcatc ggcatttaca ccctttgaag gatctttagc
     1681 aaaaattttc ttaactattt cctgaatagc aggtattctt gtagaaccac ccaccagaat
     1741 tacctcatca atatcagctg catttaagct tgcatctttt aacgcttctt tacaaggtcc
     1801 tatggtttct tgaaacaatg aattagctaa catttcaaat tttgccctgg taagtttttt
     1861 aacgaggtgc ttaggcactc catctacagg cattatatat ggaagattta cttctgtttc
     1921 tgtagtactt gataattcaa tctttgcttt ttcagcagct tcttttaaac gttggagagc
     1981 catcggatcc tttttcaaat ctagaccttc atctttttta aactcttctg ctaaccaatc
     2041 gattattacc tgatcaatat catcacctcc gaggtgagta ttaccattag tagattttac
     2101 ctcaaatact ccatcaccta attcaaggat agaaatatca aaagtacctc caccaagatc
     2161 gaatactgca atcttagagt catctttttt cttatcgagg ccgtatgcta aagcagcagc
     2221 agttggctca ttaattattc tttttacaat taatccagca atttcaccag cttccttagt
     2281 tgcctgacgt tctgaatcgt caaaataggc gggaacagta attacagctt ctgtaactgt
     2341 atgtccaaga taatcttcgg ctgttttctt cattttctga agaaccattg ctgaaatttc
     2401 ctgtggtgta tacaaacggt catcaatctt aactctaggt gtatcattat cacctttcac
     2461 tactttataa gttacccgtt caatttcttt ggtcatttct ttaaacctgt tacccataaa
     2521 acgtttaata gagtataccg tttttgtagg atttgtgatg gcctgtcttt ttgccggatc
     2581 accaacttta cgctcaccat tttcagtaaa cgcaacaatg gatggagttg tcctgcgacc
     2641 ttcgctatta ggaataacaa caggttcgtt accttccatt acagcaacgc aagagttggt
     2701 tgttcctaag tctattccaa ttatttttcc catgatttta ttaatttaaa ttttcaatat
     2761 ttttatatgg attgtttgtc aatgattatg ccaaattaag gaaagtaata acaaatgtga
     2821 catctggtga caaaaaggca gccaagattt gtttgtaaaa agctaataat aggggttgtt
     2881 aatttcacct aactccttcg aatattcatt aaaagtggct gccgatgata acttccgagc
     2941 aatgggtggt tttaagataa ctctatttgc ttttaaactt gaatccaagg ttgtaatgct
     3001 caatcaggtt cctttcagta gtaacagata atcgaatgtc cttgacaatt gtgtggcggg
     3061 aagcaaacac tcctgtacct ccttctatat ttgagtaaac tggaacttct tctaacaaac
     3121 tacccccagc agaattaata tctagatatg tagcaagcac ttgtgaacca caagctattg
     3181 ttatgtttac attatcaacc catctctcta catttggaat tggttctagt ttactttcta
     3241 gtagactgta aaaacccggc cctgaataag ttttttcaag atcctctccc ccatcaattg
     3301 ttttcgaatt tacaatacca agaaaccaat caactgattt acgaagtgta tccgcatacc
     3361 ctggtgcgag ttcaagataa ttgaatctta aagatacctc ataacgcttt ccattttttg
     3421 tagaactcca ttttatacta ccatctgaag tttctgagaa aactattcga ttaaccggac
     3481 tacccacatg aaaatcatca acaagatctg aagaagcagt taattgctca ttagttttat
     3541 taataaccag agtgtaatta gcgtccttat caagggtggc taccgcataa tatactaatt
     3601 gattaggtga gtaaaaagga ttaaggatgg ttgtatcacc agcttcgtta attacagtat
     3661 ctgtgatagc tttattatga atagtaattg tatcaaaaac aataggatcg agttcagtcc
     3721 ctttcttatt tccaactaag tttacatcca gtttataagg gtaattacta gaatctgggt
     3781 tttgggctat tagaagagca ttacctggtc cggtaaatgc ttttgtgatt tttacccagg
     3841 ttgtgtcatc actaatatca attaaaccat aaacaatggt gacatcttta tagtcagcat
     3901 aaatatcaaa atcagtgcta cagttattaa aaattatcag gctcgaaatc aataaaaaag
     3961 gaaatataat tttcttcatc tttggcatat tctacataat gaaacaaacg atcaaaatta
     4021 acaattatta tttattcgat tctagttaat ttttcgaaaa tattataaaa acatcattca
     4081 actaccgacc agtacaaaac aattacatca aattataata tccataattt gtctaataat
     4141 gacatatata aatgaaatga aaatttgcaa taatctattt aatcacccat gtatttccac
     4201 tatttagtag ttcatcaaca gaactccaag gtgatgtttc ttttgcatgc tcaactgact
     4261 tccaaaccct ttcttcaagg gtttcagctt ttacagccct aattacacct attgcggtag
     4321 gtagttcagg tggtgacata cttgcaagca tcatatggat acctgtttca gtagtataag
     4381 gatcatgaat cagaatatcg tcaatagtaa ttccatcttt tccaagatca actgccttta
     4441 gttttgtacg atctaatact ataccttttt gattatcttt tccatagagc attggttccc
     4501 ccgcttcaag tatgagttga ttatcttctt tagtctcttt acttgttatc agtgagtgga
     4561 tcttattttg gaaaatgaca caattttcaa gaatttcaac aattgaagtg cctttaaatt
     4621 tagccgcttc cttaaaaatt ttagacatca gtttaaggtt tgtgtcaggt actctggcaa
     4681 aaaacttacc ctgtgcacca attactagtt ctccaggatt gaagggatgt tcaaatgtgc
     4741 cctgtggtga cgtttttgtt tttgatccca ttggagttgt gggtgaatac tgtccttttg
     4801 taagtccgta gatcttatta ttaaacatta aataattaat atcaggatta cgccgggcaa
     4861 tgtgaataaa atgattacca ccgattgcca ttgaatctcc atctccagaa atcatccaaa
     4921 cactcaactt aggatttgtt agtttaatac ctgtagccaa tgcggcagct ctaccatgaa
     4981 ttccatgtat accataagta ttcatatagt atggaaaccg agatgaacag ccaat
//
LOCUS       DASCQP010000260         2781 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000966886, whole genome shotgun sequence.
ACCESSION   DASCQP010000260 DASCQP010000000
VERSION     DASCQP010000260.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2781)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2781)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2781
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000966886"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..387
                     /locus_tag="QF480_04400"
     CDS             <1..387
                     /locus_tag="QF480_04400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018711602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1573 domain-containing protein"
                     /protein_id="HJN05832.1"
                     /translation="EAKVNGPEIFFKKTTHDYGTIDLNGDGTYNFEFTNIGNEPLILS
                     KPRSSCGCTVPSWPKEPILPGETNKIKVTYNTHKSGAFNKTVTVFSNSKKKSTTLLRI
                     KGKVEKKPNEALPEKNNSAGATPINK"
     gene            495..1694
                     /locus_tag="QF480_04405"
     CDS             495..1694
                     /locus_tag="QF480_04405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004370111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HJN05833.1"
                     /translation="MLNISQKGQLMPESPIRKLVPYAEEAKKRGVYVYHLNIGQPDIE
                     TPEVALNAVHTYGKKVIEYSHSAGMLSLREKLVEYYRSVNIDVTADEIIVGAGASEAL
                     LFAFQSIMDPEDEVIIPEPFYANYNGFATNAGIKIVPIFSSIETGFALPPIEEFEKNI
                     TSRTKAILVCNPNNPTGYLYSKEELNTLRDIAKKYDLFLIADEVYREFTYDGKQHFSC
                     MHLKGIENNVILIDSVSKRYSACGVRIGWLVSKNKELMATAMKFAQARLSPPTFGQVA
                     AEGAVDTPDEYFDKVMEEYIARRNTIVNGINNIEGAFCPKPAGAFYVVAKLPVDDSDR
                     FCQWLLEDYSYKNKTVMMAPASGFYSTPGMGKDEVRISYVLNVDDLNNSVKVLEEALK
                     VYPGRTN"
     gene            1762..>2781
                     /locus_tag="QF480_04410"
     CDS             1762..>2781
                     /locus_tag="QF480_04410"
                     /inference="COORDINATES: protein motif:HMM:NF024882.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK 4TM domain-containing
                     protein"
                     /protein_id="HJN05834.1"
                     /translation="MAPKSNKLKPKPTAKQNDKKKKIAKRKRAKSSKSRFRLSDPRLI
                     RSIGFLFLIAGIYLLLAITTFIINWFAADSADALKTTAEQFKDHTETVTNWTGRLGSL
                     ISNYLVFKGIGIGAYFISLFFISIGLRLLVKIKLFSLWRWFELLIVSFIWIPVTFNLL
                     FSNHPENLLGGLAGRQLNIWLIAYLGNAGLILLIIFIPVIFSLIDFRFQFNWMKRKSE
                     GGGDNNESMDSTVKSKSELYNTVEFAVDDETDDHQSDFIKPEEGSGNTFKVEEESSIR
                     KERESNLIEKPDNNDELELTVELPKVETDVKTKLEPGEHFGVDTEFDPTLELADYQLP
                     TFDLLE"
BASE COUNT          945 a          432 c          537 g          867 t
ORIGIN      
        1 gaagcaaaag ttaacggacc tgaaatattt tttaaaaaaa ctacacatga ttatggtaca
       61 attgatttaa acggcgatgg tacttataat tttgaattta caaacattgg taatgaacct
      121 ctaatacttt caaaaccgag gtcatcttgt ggatgtactg ttccatcttg gcctaaagaa
      181 ccaattctac ctggtgaaac aaacaaaata aaagtaactt ataacaccca taaaagtggt
      241 gcttttaata aaactgttac ggtattttca aattcaaaga aaaaatcaac cacactactt
      301 cgaatcaagg gtaaagtaga aaaaaaacca aacgaagcac tccctgaaaa gaataacagt
      361 gctggtgcta ctccaattaa taagtaatac gaattttatt tcgtctctac gattatctgt
      421 gtaattcata attttcttat atcaattctc gaattaatca gtatgatttt tcttcaacca
      481 aattaataaa tagtatgcta aatatctctc aaaaagggca gttaatgccg gaatctccaa
      541 tcaggaaatt ggttccatac gctgaagaag caaaaaaaag aggtgtttat gtttatcatc
      601 tgaatatcgg acagcctgat atcgagacac ctgaagtagc tttaaatgca gttcatacat
      661 acggaaagaa agttattgaa tacagtcatt cggctggtat gctatcatta agagaaaaac
      721 tcgtagaata ttatagatcg gtaaatattg atgtaactgc agatgaaata attgtaggtg
      781 ctggtgcttc cgaagcttta ctgtttgcct ttcaatcgat aatggatcct gaggatgaag
      841 taataatacc tgaacctttt tatgccaatt ataatggttt tgctaccaat gcaggcataa
      901 aaattgttcc aatattttca tcaattgaaa caggatttgc gttgccccca atagaagagt
      961 ttgaaaaaaa tattacgtcc agaaccaagg cgatattggt ttgtaatcct aataatccaa
     1021 ctggctatct ttattcaaaa gaagagctta atacattaag ggatattgca aagaaatatg
     1081 atttgtttct aattgctgat gaggtatatc gtgagtttac gtacgatggt aagcaacatt
     1141 tttcatgcat gcatcttaaa gggattgaaa ataatgtaat tcttatcgat tcagtgtcaa
     1201 agcgatatag tgcctgtggt gttcgtattg ggtggcttgt atcaaaaaat aaggaactca
     1261 tggctacagc gatgaaattc gcccaggcac gtcttagtcc accaactttc ggacaagtgg
     1321 ccgcagaggg tgccgtagat actcccgatg aatactttga taaagttatg gaggagtata
     1381 tagctagaag aaataccata gttaatggaa taaataatat agaaggtgct ttttgcccga
     1441 aaccagcagg tgctttttat gtagttgcta aacttcctgt cgatgattct gacaggttct
     1501 gtcaatggtt actagaggat tatagctata aaaataaaac agttatgatg gctccggctt
     1561 ccgggtttta ctctactccg ggaatgggta aggatgaagt aagaatcagt tatgtgctaa
     1621 acgtggatga tcttaacaac tcggtaaaag tacttgaaga agctttaaaa gtttatccgg
     1681 gaagaacaaa ttaacctttt cctcaaagaa ccaactgcca atttgttact tttgtcatga
     1741 acttgtctaa attgttcttt aatggctcct aaatcaaata agttaaaacc aaaaccaact
     1801 gccaagcaga acgataagaa aaagaaaatt gctaaaagga agagagcgaa gagtagtaaa
     1861 tcacgattta gattgtccga tccgagactg attaggagta taggattttt atttttaatt
     1921 gccgggatat atctgttact agcaatcacg acttttatta ttaactggtt tgctgctgat
     1981 tctgctgatg cattaaagac aaccgctgag caatttaagg atcatacaga aacagtcacg
     2041 aattggactg gcagactggg ctcattaata tctaattatc tagtatttaa gggtataggt
     2101 attggagcat atttcatatc actatttttt atttccattg gtttacgtct gttagttaaa
     2161 ataaaattat ttagtttatg gaggtggttt gaacttctta tagtcagttt tatttggata
     2221 cctgtaactt ttaacctatt gttttcaaac catcccgaaa atttattggg cggactggct
     2281 ggccgtcagt taaatatttg gttaatagca tatttaggta atgcaggact tatattgctg
     2341 ataattttta ttcccgtaat tttttcactt attgatttta gatttcagtt taactggatg
     2401 aagagaaagt cagaaggggg tggagataat aatgaatcta tggattcaac agttaaatca
     2461 aaatctgaac tttataatac tgttgagttt gctgttgatg atgaaacaga tgatcatcaa
     2521 tcagatttta tcaagcctga ggaaggaagc gggaatactt ttaaagtaga ggaagaaagt
     2581 tctattcgga aggagcgcga aagtaatttg attgaaaagc ctgataacaa tgatgaactt
     2641 gaactcaccg tagaattacc aaaggttgaa actgatgtga aaacgaagtt ggaaccaggg
     2701 gagcattttg gtgttgatac agaatttgat ccaacacttg aacttgccga ctaccaacta
     2761 cctacatttg atttacttga a
//
LOCUS       DASCQP010000261         1774 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000969306, whole genome shotgun sequence.
ACCESSION   DASCQP010000261 DASCQP010000000
VERSION     DASCQP010000261.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1774)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1774)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1774
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000969306"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..446
                     /locus_tag="QF480_04415"
     CDS             <1..446
                     /locus_tag="QF480_04415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05835.1"
                     /translation="FNFDNSILYGFNENEFETDMDGGADSLYFFKSSILKTELDISNT
                     EIYTDVLKNEDPLFVNVEEKDFRIDSLSPAVGRADKAIAATVPKDILNNQRMPLPDIG
                     AYQFVPGQDTSETKNNLIIPPRFPAKKLEISRKGNYPKLKKRGSN"
     gene            477..986
                     /locus_tag="QF480_04420"
     CDS             477..986
                     /locus_tag="QF480_04420"
                     /inference="COORDINATES: protein motif:HMM:NF012697.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05836.1"
                     /translation="MVIGIGGISNAGKSTLALRINDYYSSNKVIILCQDDYAFPKDKI
                     PLIRDHVNWECPESIDFNYYENVVQEVITKNEIVIVEGIFAFYKDSFNKHIDRKIFLT
                     LDRSFFFSRKSNDLRWGKEPEWYMQHIWDSHHKYCDHNTPKDALRIKANEDIDLKMVI
                     DFLEKSNVK"
     gene            1081..>1774
                     /locus_tag="QF480_04425"
     CDS             1081..>1774
                     /locus_tag="QF480_04425"
                     /inference="COORDINATES: protein motif:HMM:NF015715.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HJN05837.1"
                     /translation="MQYITTYFEALFSLTSEMAPFLLLGFLFAGILKVAVPPDLMSRY
                     LGKSSFASVVNASLLGVPLPLCSCGVLPAGISLYNNGASKGSSVSFLISTPQTGVDSI
                     MVTWSMLGLPFALIRPIVAFFTGIGGGLLTNRIDKKNVNLPSKKTSHSKVKFSIKTIL
                     HYAFVEMVADIAKWLVVGLLIAALITVLVPDNFFTEFHLGGISGMLLILIVSIPLYIC
                     ATSSVPIAAVLLL"
BASE COUNT          595 a          277 c          318 g          584 t
ORIGIN      
        1 atttcaattt tgacaatagc atactttatg gttttaatga gaatgaattt gaaactgata
       61 tggatggagg agcggattct ctatatttct ttaaaagcag catattaaaa accgaattag
      121 atataagtaa tacagaaatc tatactgatg ttctaaaaaa tgaggatcca ttatttgtaa
      181 atgttgagga gaaagatttt cgaatagatt cactttcgcc agcggttgga agagctgata
      241 aagccattgc ggccacagtt ccaaaggata ttcttaataa ccaacgtatg ccattacccg
      301 atattggtgc atatcaattt gttcctggac aggatacgag tgaaacaaaa aacaatttga
      361 tcatacctcc ccgattccca gccaagaagc tggaaataag tagaaaagga aattatccaa
      421 agttaaaaaa aaggggttca aattaaactt acaactttcg ccttaattaa agaagcatgg
      481 ttattggcat aggtggtata agtaacgctg gaaaatcaac tctggcatta agaatcaatg
      541 attattattc ttcaaataaa gtgattatcc tttgtcaaga tgattatgcg tttcccaaag
      601 acaaaatacc attaataagg gatcatgtga attgggaatg tcccgaatca attgacttta
      661 attattacga aaatgttgtt caggaagtaa ttacaaaaaa tgaaattgtt atagtagaag
      721 gtattttcgc tttctataaa gatagtttca acaagcatat tgacagaaag attttcctca
      781 cacttgatag aagtttcttt tttagcagaa aaagtaacga cttaaggtgg gggaaagaac
      841 ctgaatggta tatgcaacat atttgggata gtcatcataa gtactgtgat cataacactc
      901 caaaagatgc tttaaggata aaagccaatg aggatatcga tctcaaaatg gtaattgatt
      961 tcttagaaaa gagtaatgtt aaataattca taaccaagct ccattttaaa agttataagc
     1021 aatattttta actttgtatc tctaaactaa actagttgca aggctttttc cattaatata
     1081 atgcaatata taactacata ctttgaagct ctattttcgt taacatctga gatggctcct
     1141 tttttactat taggatttct ttttgctgga atacttaaag ttgcagtgcc acctgattta
     1201 atgtcgaggt atttaggaaa aagtagtttt gcctcggtag ttaatgccag tttacttggt
     1261 gtaccattgc cactttgttc ttgtggtgtt ctacctgctg gtatctcttt gtataataat
     1321 ggtgcatcta aaggttcatc tgtatccttt ctaatatcaa caccacaaac aggcgttgat
     1381 tccataatgg taacctggtc gatgcttggt ttaccatttg ctttaattag acctattgtt
     1441 gcatttttta ccggaattgg aggtggacta ctaacaaaca gaattgataa gaagaatgta
     1501 aatctgcctt ccaaaaaaac aagtcatagt aaagtaaagt ttagtattaa aaccatacta
     1561 cattatgcct ttgtagaaat ggtagccgac attgcgaaat ggttagttgt tggtttattg
     1621 attgcagctt taatcacagt acttgtacct gataatttct tcaccgaatt tcacctgggt
     1681 ggaataagcg gtatgttgct gatattaata gtatcgatac ctctttatat atgtgcaaca
     1741 tcctcagtac ctattgccgc tgtcttactt ctaa
//
LOCUS       DASCQP010000262         3324 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000970314, whole genome shotgun sequence.
ACCESSION   DASCQP010000262 DASCQP010000000
VERSION     DASCQP010000262.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3324)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3324)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3324
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000970314"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1662)
                     /locus_tag="QF480_04430"
     CDS             complement(<1..1662)
                     /locus_tag="QF480_04430"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF013592.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family metallopeptidase"
                     /protein_id="HJN05838.1"
                     /translation="MKKLTLFLILFLIYQFGVAQFPNQGIGDTIHAIHYSIYLDEINT
                     SDQTISGYTEIEITPLVSNLNYIPLELLDLTTDSVFVNQGAATFNHINDRLTIFLDTP
                     ITPNDTVVVRIYYHGQPFHEAWGGFHFSGNYAFNLGVGFVSIPHNLGKAWFPCIDNFT
                     DRADYDLFVTANTGITVTAGGFLVDTVNNGNTTTWHWSLPHPIPTYLASVAIGNYIEY
                     QDVYIGIEDTIPISIFTRPSEAGKVAGSFVNLHEIMDWFETHFGAYPFEKIGYTGTAI
                     GAMEHASNIAYPHFAINGGTSYESLLTHELSHMWFGDKVTCSTAEDMWLNEGWATFCA
                     IYYLEELYSYDEFITEMRNNHKDVLQNAHIVDGGYWPLNDIPQQYTYGKTAYDKGGTV
                     VNVLRNYLGDSIFSDAITAFLNTDSIAYHSVSSYTLRDFLTDYTGINMIPFFDAWVMT
                     PGTPHFSIDSIQVTEGGASFMIDIWLKQKRKGFDFLADDNIVEVTLVDENFNYYTDTI
                     HFSGKTGHSVKYYDLETMPTEPVAAFIDLFEKVNDATTDNYKYFTQ"
     gene            1956..>3324
                     /locus_tag="QF480_04435"
     CDS             1956..>3324
                     /locus_tag="QF480_04435"
                     /inference="COORDINATES: protein motif:HMM:NF014385.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HJN05839.1"
                     /translation="MKIRPALLMIAITLVAFGINVTAQKLWTLEECINYAFENNIDIK
                     QSVLSVDAADKDVLQSKYNLAPSVNASTSHTFGWGRSFDESANRYASNNTQSSYFSLN
                     SQVTLFNGLQLINNVRQKQFDYLAEKYASDKIRNDMSLNVAAAYLQILFTIELANNAQ
                     RQVDISKEQIERTKKQVDAGAVARGSLYDIEAQGAVDDANLVSASNNVMIAYLDLKQL
                     LDMESNTEFDIDKPVLEIMGNPTLLPAGMIYNKSVTIMPEIKSAEYRVESAQKGLSLV
                     KGQRSPRLYASGSYGTNFSDQLMKSYIPGQPGYNDMIPFGDQFKENRNGVLSLGLSIP
                     IFNGYQVSTNIKKSKIYYESVNLSLASEKLRLRKNIEEAYADAIAAYQTFISRQKSVE
                     AFTEAFKYTEEKFNVGMVNSTDYNVVKIQLANAESNLASSKFDYIFKTKILDFYLGRS
                     LSLSDI"
BASE COUNT         1128 a          579 c          593 g         1024 t
ORIGIN      
        1 ctgtgtaaaa tatttataat tatcagtggt agcatcatta accttttcaa acaaatcgat
       61 aaaagctgct actggttctg ttggcatggt ttctaggtca taatatttta cagaatgacc
      121 tgtcttacca gagaaatgta ttgtatcagt atagtagtta aagttctcat caactaaagt
      181 tacctcaact atattatcat cagctaagaa atcaaaccct ttacgttttt gctttagcca
      241 gatatcaatc ataaaacttg cacctccttc ggtaacttgt attgaatcta ttgagaaatg
      301 cggtgttccg ggagtcatta cccaagcatc aaaaaatggt atcatattaa tgccagtata
      361 atcggttaaa aaatcacgta acgtgtaaga agaaaccgaa tgatacgcaa tactatcggt
      421 gttgaggaaa gcagtaatcg catcagagaa aattgaatca cctaaataat tgcgtaatac
      481 gttgaccacc gtaccacctt tatcataagc tgttttgcca tatgtatatt gttgagggat
      541 atcatttaaa ggccagtatc cgccatcaac aatatgtgca ttttgtagta catctttatg
      601 attattacgc atttctgtga taaattcatc ataactatat agctcctcta aataataaat
      661 agcacaaaat gtagcccagc cttcattaag ccacatatct tcagcagtag aacaggttac
      721 cttatcacca aaccacatat gtgaaagttc atgagtgaga agcgattcgt acgatgttcc
      781 tccatttata gcaaaatgag gatatgctat gttggatgca tgttccatag ctccgatagc
      841 tgttccggta taaccaatct tctcaaaagg atatgctcca aaatgagtct caaaccagtc
      901 cattatttca tgcagattaa caaaagaacc ggccacttta cctgcttcag atggtctggt
      961 aaatatgcta attggtattg tgtcttctat accaatatac acgtcctgat attcaatata
     1021 gttgcctatt gccaccgaag ccagatacgt tggtataggg tgaggaagac tccaatgcca
     1081 agtagttgta ttgccattgt taacagtatc taccagaaat ccaccagcag ttacagtgat
     1141 gccggtatta gcagtaacaa acaaatcgta atcagctcga tcagtaaaat tgtcaatgca
     1201 agggaaccat gcttttccaa gattatgtgg aatagacaca aaaccaacgc ctagattaaa
     1261 agcataattg ccggaaaaat ggaagccacc ccaagcttca tgaaaaggtt gaccatgata
     1321 gtaaatccgt actactacag tatcgtttgg agttattggg gtatctaaaa aaattgtaag
     1381 tctatcatta atatgattaa aagtagcagc accttgatta acaaatacag aatcggttgt
     1441 caagtcaagt agttccaatg gaatataatt caggttggaa accaatggcg tgatctcgat
     1501 ttcggtatag ccagatattg tctggtcaga ggtgttaatc tcatcaagat aaatgctgta
     1561 atgtattgcg tgtatcgtat ctcctattcc ctgatttgga aattgtgcca ctccaaattg
     1621 gtatatcaga aataaaatta gaaataatgt tagttttttc atattccatt ttttaatcgt
     1681 ttgtaaaatt agtgcttttt tcatttgtat tccacttgct attatcaaga gctatacata
     1741 acaatatgat tgaaattgct ttagtttttc attaaggcaa gtatagaatc tcgttccttt
     1801 acattagatg tccgatttcg tacaaatacg tgttaataac tggacacttt acttgctaat
     1861 aatttaatat ttaataatca ccttgttgtg tttcaattga ttaactttgt ggcacatttt
     1921 tagataatat atgtggaatc aaaaaaacag aagagatgaa aattaggccg gctttgctaa
     1981 tgatagctat tacgttagtt gcttttggaa taaatgtaac tgctcaaaaa ttatggacat
     2041 tagaggaatg tatcaattat gcatttgaaa ataatattga cattaaacag agtgtattgt
     2101 ctgttgacgc tgcagataaa gatgttctac aaagtaagta taatcttgca ccctcagtaa
     2161 atgcaagtac atcacataca ttcggatggg gacgttcatt tgatgaatca gcgaacagat
     2221 atgcatctaa taatacacag tcaagttatt ttagcctaaa ttcacaggta actttgttta
     2281 atgggctaca gttgataaac aatgttcgtc aaaaacagtt cgactatctt gcagaaaaat
     2341 atgcttctga taaaatacgc aatgacatgt cgttaaacgt tgccgctgct tatcttcaaa
     2401 ttctgtttac tatagaactt gcaaacaatg cacaacgcca ggtagatatt tcaaaagagc
     2461 aaattgaacg taccaaaaag caagttgatg caggggcagt agctagggga agtttatatg
     2521 atatagaagc tcagggtgct gtggatgatg ccaaccttgt tagtgcaagc aataatgtta
     2581 tgatagctta tcttgaccta aagcaattat tagatatgga atctaacact gaattcgata
     2641 ttgacaagcc tgttctggaa ataatgggta accctacatt acttcctgct ggtatgattt
     2701 ataataaatc cgttacaatt atgcctgaaa taaaaagtgc cgaatacagg gttgaaagtg
     2761 cacaaaaagg cctgtcatta gtcaaaggac aacggagccc caggttatat gcatcaggtt
     2821 catacggtac aaatttttca gatcaactta tgaaaagcta tattccaggt caacccggat
     2881 acaacgatat gatacctttt ggtgatcaat ttaaggaaaa cagaaacgga gtattaagct
     2941 taggcttatc aattcctatt ttcaatggtt atcaagtttc aacaaatatt aagaagtcta
     3001 aaatatacta tgaatcagtt aacctaagtc ttgcgtcgga gaaattacga ttaaggaaaa
     3061 atattgaaga ggcttacgct gatgccatcg cagcctatca aactttcata tcacgtcaaa
     3121 aaagtgtaga agcgtttacc gaagctttta aatataccga agaaaagttt aatgtaggaa
     3181 tggtaaactc aaccgattat aatgtagtca aaattcagct tgccaacgcc gaatcaaatt
     3241 tagcctcatc aaaattcgat tatattttca aaaccaagat actcgacttt tacctcggga
     3301 gaagtttatc gttgagtgat attg
//
LOCUS       DASCQP010000263         2824 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000971070, whole genome shotgun sequence.
ACCESSION   DASCQP010000263 DASCQP010000000
VERSION     DASCQP010000263.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2824)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2824)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2824
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000971070"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..658
                     /locus_tag="QF480_04440"
     CDS             <1..658
                     /locus_tag="QF480_04440"
                     /inference="COORDINATES: protein motif:HMM:NF026018.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="polysaccharide biosynthesis C-terminal
                     domain-containing protein"
                     /protein_id="HJN05840.1"
                     /translation="LLLPLFSKMISIRESVEKMVKLSFSIIISGSLIIAITLQFFATD
                     LMQLMYDINPGESEQHFISRINQSATILKLLMVSFIAISTNYIFGTLLTANHNLKQLN
                     LIALGGLVINITLNLILIPYLYSIGSAYASLATQSITAILQFLLVFKIFKFKINYKIF
                     VNLVFLILALITIGYLLTQVINLRWELSFILMLISGLCVSIVLKLLNVKEFISIIKEK
                     "
     gene            739..1791
                     /locus_tag="QF480_04445"
     CDS             739..1791
                     /locus_tag="QF480_04445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05841.1"
                     /translation="MDSQNQHHKPFLSGVLMQVVYGYKKHLTIIAISVIILSSIFSGP
                     YFITPLFKSTVILYPTASNSISKVLLSDNFNNSKDILEFGEIEQTEQMLQVLNSNKIR
                     DRIISKYNLLNHYNIKQGSKYRMTRLYEEYESNFKFRRTEYMAVKITVYDKNPQLAAD
                     MANEVADLVDSTINQMQKKIATKAFKIVEDEYNKLKKEIKIKEDSLTILREFGVHDYE
                     SQSEMFNRQLAIEMAKGESKSVKRLEKKLETLAKYGGPYVSLRDALEHDKKQLSQLKA
                     KYEEAKVDANESLPHTFVINTAYKAEKKTYPLRWLIVLVSTIAALFLAIILFSLIDLF
                     SGELGQDLKKKDLDVD"
     gene            1953..>2824
                     /locus_tag="QF480_04450"
     CDS             1953..>2824
                     /locus_tag="QF480_04450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05842.1"
                     /translation="MDKLFNSTHLINLIAKWRYHLLAIVVISAILAGVFSGPTFITPL
                     FKSYAIAYPANVEPYSDESETEQMLQILNSQDIVDSMVKKFDLPKHYEVNPKYKYFKT
                     VLYDLYHEHVSINKTPYESVLIEVSDRNPDTAALMVISILDFYDRKISQLHKSKSLEV
                     IDMYYIQLEKKRMALDSLKNILYKLGTEDGLIEYGFQSQELMRGYLGTIDGGNRSQIN
                     IKEVERLLKNMEKGIGQLIEVVQMVQHEARSYVDVKIDYEMAVRFFDSNLTYSNIVSY
                     PYPADKKSYPIRWL"
BASE COUNT         1024 a          410 c          471 g          919 t
ORIGIN      
        1 attattatta cctctattct caaaaatgat aagtattaga gaatctgttg agaaaatggt
       61 caaattatcc ttttcaataa taatttctgg ctcgttaata atagctatta ctttacaatt
      121 tttcgccacc gatttaatgc agttgatgta tgatattaat cccggtgagt cagaacaaca
      181 ttttatatcg cgtataaatc aatcagcaac aatactcaaa ttattgatgg tcagctttat
      241 tgctatttcg acaaattata tttttggcac gctgttaact gcaaatcata atctaaaaca
      301 actaaattta attgccctag gagggttagt aattaatatt acccttaatt taatcctaat
      361 cccttatctt tattctatcg gttcagctta tgcaagctta gcaacccaga gtattacagc
      421 aattttacaa tttcttcttg tttttaagat attcaaattc aaaatcaatt acaaaatttt
      481 tgtaaacctt gtttttttaa tacttgcctt aattacaatc ggttatttgt tgacccaggt
      541 tataaacctg agatgggaat tatcgtttat cttgatgcta atttcggggc tttgtgtttc
      601 aattgtatta aagttattaa atgtcaagga gtttatttca ataattaagg aaaaatagat
      661 attgtataac gaattttata cttttattaa gacataaata atatttctta tttttgactg
      721 cttaaattca aaatataaat ggattcgcaa aatcaacacc ataaaccatt tttatcagga
      781 gttttgatgc aagttgttta tggttacaaa aagcatctca caataatagc tatctctgtt
      841 attatacttt cctcgatatt ttcaggtccg tattttataa cacctctatt taagtcaacg
      901 gtaatactgt atccaactgc cagcaactct atttcgaaag ttttattaag tgataatttt
      961 aataactcaa aggatatact tgaatttggt gagattgaac aaactgaaca aatgcttcag
     1021 gtgctaaact caaataaaat acgcgatcgt ataatcagta aatataatct gttgaatcat
     1081 tataatatta agcaagggtc aaaatataga atgacaaggc tttatgaaga atatgagagc
     1141 aattttaaat ttagaagaac agaatatatg gcagtgaaaa ttactgtcta tgataagaat
     1201 ccacaattag cagcagatat ggcaaacgag gttgctgatc tggtagactc tacaataaat
     1261 caaatgcaaa agaaaattgc aactaaggct tttaaaattg tagaagatga gtataacaag
     1321 ttaaagaaag aaattaagat taaagaagat tcattaacaa tattgcgtga gtttggagtt
     1381 catgattatg agagccagtc ggagatgttc aacaggcaat tagctattga aatggctaaa
     1441 ggtgagagta aaagtgttaa aagacttgaa aagaaacttg agacacttgc aaaatatggc
     1501 ggtccgtacg tgtcattgag agatgctctt gaacatgata aaaaacagtt aagccaattg
     1561 aaagctaagt atgaagaagc aaaagttgac gctaatgaaa gtttacctca tacatttgtt
     1621 ataaatacag cttataaagc agagaagaaa acataccctc taagatggct gattgtgctg
     1681 gtttcaacta ttgcagcatt atttttggca ataatacttt tcagcttaat tgatttgttc
     1741 tcaggagagc tgggccagga tcttaaaaaa aaagatttgg acgtagatta actgcgtctg
     1801 aaagaaattc tataagaatc aatcttttta aactgcccgt agtctatcgt aagcaggaaa
     1861 aaaagaacga aatttataga aacattgatg atcaagaaag gttatcacaa agtgctgatg
     1921 aagattatat ttgggatatt aataatatag acatggacaa actatttaat agcacacatt
     1981 taataaactt aattgccaag tggaggtatc acttattagc aattgttgtt atttccgcaa
     2041 tactagctgg agtattctca ggtcctactt tcattacacc tctgtttaag tcatatgcca
     2101 ttgcttatcc tgcaaatgtt gaaccctatt cagatgagag tgaaactgag cagatgttac
     2161 aaattcttaa ttctcaagat attgttgata gcatggtaaa aaagtttgac ttacctaaac
     2221 actatgaagt aaatcctaaa tacaaatatt ttaagacggt actttatgat ctttatcacg
     2281 aacatgtatc tataaataaa acaccatacg agtctgttct tatcgaagtt tctgatcgaa
     2341 accctgacac agcagcatta atggtaatat ccatactaga cttttacgat cgcaaaattt
     2401 ctcagttaca caaaagcaaa tccttggagg taattgacat gtactatatc cagctagaaa
     2461 aaaaacgtat ggctttggat tcattgaaaa acattctata taaacttggt actgaggatg
     2521 gcttgattga gtatggtttt caatcgcagg agttaatgag aggttactta ggtacaattg
     2581 atggaggaaa tcgatctcaa ataaacatta aagaagttga aagactgttg aaaaacatgg
     2641 aaaaaggaat tggacagcta atcgaagttg ttcaaatggt acaacatgaa gctagatcat
     2701 atgttgatgt aaaaattgat tacgaaatgg ctgtgagatt cttcgattca aatcttactt
     2761 acagtaatat agttagttat ccttatccag cagataaaaa aagttatcca ataagatggt
     2821 tgat
//
LOCUS       DASCQP010000264         3652 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000977404, whole genome shotgun sequence.
ACCESSION   DASCQP010000264 DASCQP010000000
VERSION     DASCQP010000264.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3652)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3652)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3652
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000977404"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..388)
                     /locus_tag="QF480_04455"
     CDS             complement(<1..388)
                     /locus_tag="QF480_04455"
                     /inference="COORDINATES: protein motif:HMM:NF014657.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF177 domain-containing protein"
                     /protein_id="HJN05843.1"
                     /translation="MGSHCYTYKIDDPFFANFENLDADKGLLNLVVDLMVESNLLNIR
                     FYFTGYIELQCDRCLDKFNLNVENSFRLIVKYGEQFEEISEEVIVIPSSESNIDLGQF
                     IYEYVNLMLPIKKAHANDAIGNEKCNA"
     gene            697..1644
                     /locus_tag="QF480_04460"
     CDS             697..1644
                     /locus_tag="QF480_04460"
                     /inference="COORDINATES: protein motif:HMM:NF013761.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline dehydrogenase family protein"
                     /protein_id="HJN05844.1"
                     /translation="MRLYKFELMPMMFINKLIASALPLMPQRLVWIFSSRYIAGQNLD
                     EAIKAAKKMNNEGNMVTIDLLGEFITEMTEAERNRDDYIEIINSVEKNDIDGNYSLKP
                     TMFGLLIDKHACYRIIRDIVKKAVEFDNFVRIDMEDSQCVDLEIELFRKLKKEFPKNV
                     GLVLQAYMRRTMDDINGMLDLNTTENPVNFRLCKGIYVEPENIAYKKYDEINNHFLKD
                     LEHMFKKGIYPGIATHDEKLVNGAYKLIEKYNVPNDKFEFQMLYGVTPALRKSILDKG
                     YRMRIYAPFGKQWFAYSTRRLKENPKMAQEIIKALFVRG"
     gene            complement(1712..>3652)
                     /locus_tag="QF480_04465"
     CDS             complement(1712..>3652)
                     /locus_tag="QF480_04465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05845.1"
                     /translation="HQPATEPGNPNIVYSEWQEGNLNRTDRATGEIVFIQPQPEAGED
                     YERYNWDAPILVSPHSPSRLYFASQRVWRSEDRGDSWTSISGDLTLNQERITLPVMDI
                     TWSWDSPWDVSAMSNYNTITSLAESPLREGLIYAGTDDGLLQVTEDGGVSWRKIEVDK
                     LPDVPATAFVNDIKADLHDSNTVYVVLDNHKNGDFNPYIIKSTDRGNKWQSITGNIPK
                     KTLVWRIVQDHIKPELMFAGTEFGIYFTIDGGDQWVKLKGNVPTISFRDLAIQKREND
                     LIGASFGRSFFVLDDYSALRHINPDQLKEEATLFPTRDAWWYIPRPSSTFWGKGSQGA
                     SYFLAPNPPFGAVFTYYLSEGYSTKKTARKKNEKKLIKEKKNVPFPGWEKVEEERREE
                     TPIILMTIKDSEGNVVRRIEGPAGKGFHRVAWDLRKPYASAINIHNSSVYDPPSSRGG
                     NLVLPGSYTVSISKRINGEITELSEPVTFMVNKMNKGTLEGSSPEKTVAFWDEVDDMR
                     MATSALRIVLDNAKRRVAGMKKAIAVTNIKPGDLDKKVYSINQQLLDINERLYGNRSK
                     NEIGEKTKPTVMSRLRSASSGVKNSTYGPTPTHIRSLDIAKSEFKKILIVLENIIELE
                     IPALEKQLIDAGAPWMEGQEIH"
BASE COUNT         1174 a          706 c          600 g         1172 t
ORIGIN      
        1 ccgcattaca tttttcgttg ccaatcgcat cattagcatg ggctttctta atgggtaaca
       61 ttaaatttac atactcataa atgaactgac caagatcaat attactttct gatgaaggaa
      121 ttacaataac ttcttcagaa atttcctcaa attgctcgcc atattttaca atcaacctaa
      181 aagaattttc tacattaaga ttgaatttat ccaggcaacg atcgcattgc agttcaatat
      241 aaccagtaaa ataaaaccga atgttcaaca agtttgattc taccattaaa tctacaacaa
      301 ggtttaacaa ccctttgtca gcatctaagt tctcaaaatt agcaaagaac ggatcgtcaa
      361 ttttataagt atagcagtga cttcccaaac ttaaaccttt aatcggtatt atatattcta
      421 ccatcttctt caccctacac aaaattcggg cgacaaattt acaccgaatt attaggattt
      481 acaaacattt taaaacagaa taaattgtgg tataatattc ttgcctttaa ttaaaactcc
      541 gttaatcaat aaatcctagt atcaaatttt tcattatagg ttgagcacca caaccccaaa
      601 cacctctaat acattcaaag ataggcgaat acacgaataa tgcaattaca aaaaaatatt
      661 aatttttatt acaattatga acaaatctat ctaaatttgc ggctatataa atttgaactt
      721 atgcctatga tgttcatcaa taaattaata gcctctgctt tacccctgat gccccaaaga
      781 cttgtctgga ttttttctag cagatacatt gccggccaga atctcgatga agccataaaa
      841 gctgctaaaa agatgaataa cgagggaaat atggttacaa ttgatttgct tggtgagttt
      901 atcacagaga tgactgaagc tgaaagaaac agagatgatt atattgaaat tattaatagt
      961 gttgaaaaaa atgatattga tggcaactat tcattaaaac caacaatgtt cggattgtta
     1021 attgataagc atgcttgtta tagaataata agagacatag ttaaaaaagc tgttgaattt
     1081 gataattttg tacggattga catggaggat tcccaatgtg ttgatttaga aatagaacta
     1141 ttcagaaaac ttaaaaaaga atttccaaaa aatgtaggac tggttcttca ggcatatatg
     1201 cgccgcacta tggacgatat taatgggatg ttagatttga acacaaccga aaatcctgta
     1261 aattttagat tgtgtaaagg aatttatgta gagccggaaa acattgctta taaaaagtat
     1321 gatgaaataa acaatcattt tctgaaagat cttgagcaca tgttcaaaaa aggcatttat
     1381 cctgggatag ctacacacga cgaaaaactc gtaaacggag catataaact tattgaaaaa
     1441 tataatgttc caaatgataa atttgaattt caaatgttat atggcgtcac gccggcatta
     1501 cgaaaatcga ttctggataa gggttataga atgcgtattt atgcaccatt tggcaagcaa
     1561 tggtttgcat attcaacccg ccgattgaaa gaaaacccaa aaatggcaca ggagataatt
     1621 aaagccctgt ttgttagagg gtaggtagat tacttctatt ctccgtgtga tctcaaacca
     1681 cttcaaatat tacttcacat agaccaaaaa actagtgaat ctcttgtccc tccatccagg
     1741 gagctccagc atcgataagt tgtttttcaa gtgctggaat ctccaattca ataatattct
     1801 ctaatactat taatattttc ttaaattcac tttttgcaat atctaaactt cttatatgtg
     1861 taggagtggg gccgtatgta gagtttttaa ctcccgatga ggcacttctt aatctactca
     1921 taacagttgg ttttgttttt tctccgattt cattctttga cctgttacca taaagccttt
     1981 cgttaatgtc aagcaattgt tgatttatag aataaacctt cttatccaga tctcctggtt
     2041 taatattcgt gacagcgata gcttttttca ttccggcaac ccttctttta gcattgtcta
     2101 aaactatccg caatgcagat gttgccatcc tcatgtcatc cacctcgtcc caaaaagcta
     2161 cagttttttc aggagaagat ccttcaaggg ttcctttatt cattttattt accatgaaag
     2221 tcaccggttc agacaattca gttatttcac cattaattct ttttgaaata cttacagtat
     2281 agcttccagg cagaacaaga ttgccaccgc gtgatgatgg tggatcataa accgaactgt
     2341 tatgtatatt gatagctgag gcataaggct tacgtaaatc ccaagctact ctatgaaaac
     2401 ctttgcctgc aggtccttca atacgccgaa caacatttcc ttcactatct ttaattgtca
     2461 ttaagataat tggagtttct tccctgcgtt cttcttcaac tttttcccag cctggaaagg
     2521 gcacattctt tttttctttt ataagttttt tctcattttt tttacgtgca gtttttttag
     2581 tactatagcc ttcagaaaga taataggtaa ataccgcacc aaacggagga ttaggagcca
     2641 aaaaatatga tgctccctgt gaacctttgc cccaaaaagt tgatgaggga cgaggaatat
     2701 accaccaggc atcacgggtt gggaaaagcg ttgcttcttc ttttagctga tctggattta
     2761 tgtggcgtaa tgcactataa tcatctagca caaaaaaact acggccaaat gatgctccaa
     2821 tcaaatcatt ttcacgtttt tggattgcta aatcgcgaaa tgaaatagtg gggacatttc
     2881 ctttaagttt tacccactga tctccaccat caattgtgaa atatattcca aattcagttc
     2941 cggcaaacat aagttcgggc tttatatgat cttgaacaat acgccaaaca agtgtttttt
     3001 ttgggatatt tccggtaata gattgccact tatttccacg atcagtgctt ttaattatat
     3061 agggattaaa atcaccattt ttatgattat caagcacaac ataaacagta tttgagtcat
     3121 gtaaatctgc ttttatgtcg tttacaaatg ctgtagccgg aacatcggga agcttatcaa
     3181 cttcaatttt tcgccaactt acaccaccat cttctgtaac ttgtaacaga ccgtcatcag
     3241 ttccagcgta aattaaacct tcacgcaaag gggattctgc taatgaagta atagtattat
     3301 agtttgacat ggcacttaca tcccatggcg aatcccagct ccatgttatg tccataacgg
     3361 gcaaagtaat ccgctcctga tttagagtaa ggtcgcccga aatacttgtc cagctatctc
     3421 ccctgtcttc agatcgccat accctttgag atgcaaaata taatcttgaa ggagaatgtg
     3481 gactaaccaa tattggtgca tcccagttat atcgctcata gtcttcacct gcttctggtt
     3541 gaggctgaat aaacacaatt tctccagttg cccgatcggt acggtttaaa ttaccttctt
     3601 gccattctga ataaacaata tttggatttc ccggctctgt agcgggctga tg
//
LOCUS       DASCQP010000265         3511 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000985994, whole genome shotgun sequence.
ACCESSION   DASCQP010000265 DASCQP010000000
VERSION     DASCQP010000265.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3511)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3511)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3511
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000985994"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..806)
                     /locus_tag="QF480_04470"
     CDS             complement(<1..806)
                     /locus_tag="QF480_04470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006281464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004427 - inorganic diphosphate
                     phosphatase activity [Evidence IEA];
                     GO_function: GO:0009678 - diphosphate hydrolysis-driven
                     proton transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proton-translocating pyrophosphatase"
                     /protein_id="HJN05846.1"
                     /translation="MKKILSILTLFAAPFMVSASEADLVIPAGIRDQSILYWGFLITF
                     AGFMFGLYQFVQVKKIRAHKSMLDVAQVIFETAKTYLIEQGKFLAILFAFIGAAVAFY
                     FGWLSDANFGAGGVFMILGWTVIGILGSYSVAWFGIRMNTLANSRMAFASLERKPIKL
                     LNIPLNAGMSIGVVLISLELIMMLMILLFVPGEYAGASFIGFAIGESLGASVLRIAGG
                     IFTKIADIGSDLMKVIFKIGEDDPRNPGTIADCVGDNAGDSVGPTADGFET"
     gene            1102..1692
                     /locus_tag="QF480_04475"
     CDS             1102..1692
                     /locus_tag="QF480_04475"
                     /inference="COORDINATES: protein motif:HMM:NF014618.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional nuclease family protein"
                     /protein_id="HJN05847.1"
                     /translation="MKKVKLEIVGMSYSQSQSGAYALILGIPGQKKRLPIIIGSNEAQ
                     AIAIELEKMKPSRPLTHDLFANFAKHFNITIKEVIINKFEEGIFYSTLICKQGDNLSE
                     LDSRTSDAVALALRFNCSIYTYQSIIDEAGIMLEDDPMGDDPEAKKAMSTPEDQESDF
                     SKYQTEELEDMIKTAVENENYEEASKIRDELKIRRK"
     gene            1856..3313
                     /locus_tag="QF480_04480"
     CDS             1856..3313
                     /locus_tag="QF480_04480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008150341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside transporter C-terminal
                     domain-containing protein"
                     /protein_id="HJN05848.1"
                     /translation="MTGFVDKQFNDSIPDSTVNTKVVINKEFEESLQFDSTNDEKRGN
                     ILDLERKGGFKPMSIIRGIFGIFILILISFIFSSNRKKINWGVVGKGLGLQLLLALGV
                     LYVPFIEAAFDFIGTGFVLILDFTKAGTDFLFKSFVTNQIEMANINFVIQILPTIIFF
                     SALTSLLFYLNIIQYIVFGLAWVMTKFMKLSGAESLSVAGNIFLGQTESPLMIKAYLP
                     KMNNSEIMLVMMGGMATLAGGVLAVYISFLGGDDPVQRILFAKHLLTASVMAAPGAVV
                     ISKILVPQTEDIDSDVIIPREEAGKNILDAISNGTTQGLKLAVNVAAMLLVFIAFIAM
                     FNYISKSIGDLLNLNAWITDITDGKFNNLSLQFMLGYIFAPIMWLIGVNINDITLVGQ
                     LLGEKIIMTEFIGYVSLAEMKEAHVFTDSKSVIMATYMLCGFANFASIGIQIGGIGSL
                     APTKRVLLAKYGLRALLGGTIASLLSATIVGALIG"
BASE COUNT         1212 a          577 c          608 g         1114 t
ORIGIN      
        1 gtttcaaaac catcagcagt tggacctaca ctatcaccgg cattatctcc aacacagtca
       61 gcaatggttc cggggttacg tggatcgtct tcccctattt taaagattac tttcatcagg
      121 tcagatccta tatctgcaat ctttgtaaaa ataccacctg caatcctcaa cactgaagct
      181 cctaacgatt caccaattgc aaaaccaata aagcttgcac ctgcatattc acctgggacg
      241 aacaatagta tcataagcat cattatcaac tccagcgaaa tcagtactac accaatactc
      301 atacctgcat tcaatggaat gttaagtaat ttgattggtt tcctttccaa agatgcaaaa
      361 gccatcctag aattagctaa tgtattcatt cgtattccaa accatgcaac actatatgaa
      421 ccaaggatac ctattactgt ccatcctaat atcataaata caccgccagc tccaaaatta
      481 gcatcgctta gccagccaaa atagaaagca acagcagcgc caataaatgc aaataatatg
      541 gcaaggaatt taccttgctc gataaggtaa gtttttgcgg tttcaaaaat aacctgagca
      601 acatcaagca ttgatttatg tgccctgatt ttttttacct gtacaaattg gtacaagcca
      661 aacataaaac cggcaaaagt gatcaagaaa ccccaatata agattgactg atctctaatt
      721 cctgcaggaa tcacaagatc tgcttcactt gccgaaacca taaaaggtgc agcaaataaa
      781 gttaaaattg aaagaatttt tttcatacta tttttttatt gatttaaact acaaaatttc
      841 aaacgtttgc ataattggcc gcaaaaatat aaataatggt ttaactggca caataataat
      901 tacttttgtt attaatactt atactaacaa taattttcag aaaaaaaatt cgagagaaac
      961 aaactattta aaacaggaat atttctttat tcaaatctct agtcatattt cagcattttg
     1021 ttagtaaaaa gcaaaaaaca attaatcaag aaatcaataa agcattaaaa gttttatatt
     1081 tttatcaatt atttcagcca tatgaaaaag gttaaactcg aaattgttgg aatgtcttat
     1141 agtcaatcgc aaagcggagc ttatgcgttg atacttggta ttccgggaca gaaaaagagg
     1201 ttacctataa ttatcggaag taatgaagca caggcaattg caattgaact tgagaaaatg
     1261 aaaccctctc ggccacttac tcatgatttg tttgcaaact tcgccaaaca ttttaatata
     1321 actattaaag aagttattat aaataaattt gaagagggga ttttctattc aaccctgata
     1381 tgcaaacaag gtgataatct tagtgaatta gatagcagaa cttctgatgc tgttgccctt
     1441 gcattaagat ttaattgctc aatatataca tatcaaagta ttattgatga agctggaata
     1501 atgctagaag atgatccaat gggcgatgat ccagaggcaa aaaaagcaat gtcaacaccc
     1561 gaagaccagg aatctgattt tagtaaatat caaactgaag agttagaaga catgattaag
     1621 actgctgttg aaaacgaaaa ttacgaagag gcctcaaaaa ttagagatga acttaaaata
     1681 cgaaggaaat aatctaacaa ttcaagtatt ttgatatcta caatcttaac ttttacaatc
     1741 cttaggtttt aattaagtga aataattacc aactacattg attaatgaca catgaataag
     1801 aagaaaagga atttaataat cttgtttttt tttagcagga tttttttctc ttgcattgac
     1861 aggatttgtc gataaacaat ttaatgactc tatccctgat agtacggtta atactaaagt
     1921 agttatcaat aaagagtttg aagaaagctt acagtttgac tctaccaatg atgaaaaaag
     1981 gggaaacatt ctggatttag aacgcaaagg tggttttaaa ccaatgagta ttatccgggg
     2041 aatattcggc atatttatcc taatactgat ttcctttata tttagttcca atcggaaaaa
     2101 gatcaattgg ggggttgttg gaaaaggtct aggtcttcaa cttttgttag cattgggagt
     2161 actttatgtt ccttttattg aggctgcatt cgattttatt ggcacagggt ttgtcttaat
     2221 acttgatttc actaaggctg gtactgattt cctttttaaa tcatttgtta caaaccagat
     2281 agagatggcc aacataaatt ttgttattca aatacttcca acaataattt tcttttctgc
     2341 attgacaagt ttactttttt acttaaacat tatacagtat atcgtttttg gtttggcttg
     2401 ggtaatgacc aaatttatga aactatcagg agctgaaagc ctttcagttg ccggaaatat
     2461 ttttttagga caaactgaat caccattaat gataaaagcc tatttgccga aaatgaataa
     2521 ctcggagata atgctggtta tgatgggagg catggcaact cttgccggtg gagttctcgc
     2581 agtttacatt agttttctgg gaggggatga ccctgttcag cgcatactat ttgcaaagca
     2641 tttacttacc gcatctgtaa tggctgctcc cggtgctgtg gtgatttcca aaattttagt
     2701 tccacagacg gaggatatcg actcagatgt tataattcca agagaagaag ctggaaaaaa
     2761 tattcttgac gcaatttcaa acggcacaac tcaaggatta aagctagcag taaatgttgc
     2821 tgcaatgctt ttggtattta tagcattcat agcaatgttc aactatattt caaaatcaat
     2881 aggtgatctc ctgaacttaa acgcatggat tactgatata acggatggta agtttaataa
     2941 tctatcatta cagtttatgc ttggttatat ttttgcacca attatgtggc ttattggtgt
     3001 taatattaat gatattacat tggtaggtca gctattaggg gaaaaaatta tcatgactga
     3061 atttattgga tatgtaagtc ttgctgagat gaaagaagcc catgtcttta ctgattccaa
     3121 atctgttata atggctacat acatgttatg tggatttgca aattttgcat ccattgggat
     3181 tcaaataggt ggtataggtt ctttagctcc aacaaaaaga gtattgttag cgaaatatgg
     3241 tttgagagca ttacttggtg gtaccatcgc ttcattgttg tcagcaacaa ttgtaggagc
     3301 gttgattgga tagttaatat ttgttttgag atgccaattt cttagcgtaa aagtttacga
     3361 tgtccaatta aaatttaaat atttttgcaa tttccaaaag agtaaatttc ggataaaaag
     3421 ttagaaggtt caataagaga agaatgaaac aatatcacaa actactgcaa tatgttctcg
     3481 ataatggaaa tcataaagag gacagaactg g
//
LOCUS       DASCQP010000266         2462 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000000986218, whole genome shotgun sequence.
ACCESSION   DASCQP010000266 DASCQP010000000
VERSION     DASCQP010000266.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2462)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2462)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2462
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000986218"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..596)
                     /gene="ftcD"
                     /locus_tag="QF480_04485"
     CDS             complement(<1..596)
                     /gene="ftcD"
                     /locus_tag="QF480_04485"
                     /EC_number="2.1.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018336339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030409 - glutamate formimidoyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0030412 - formimidoyltetrahydrofolate
                     cyclodeaminase activity [Evidence IEA];
                     GO_process: GO:0019556 - histidine catabolic process to
                     glutamate and formamide [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate formimidoyltransferase"
                     /protein_id="HJN05849.1"
                     /translation="MRQLIECVPNFSEGRDMTVIKQITDEIEKIEGVKLLDVDPGAAT
                     NRTVVTMVGTPDEVIEAAFVAIKKAAEVIDMRHQKGEHPRFGATDVCPLVPVANIKME
                     ETVVYARKLAERIGNELKIPVYCYENAAFAEERRNLATCRSGEYEGLKEKLRDPQWKP
                     DFGPAEFNERVAGSGVTAVGARDFLVAFNVNLNTTSTRR"
     gene            748..2379
                     /gene="pruA"
                     /locus_tag="QF480_04490"
     CDS             748..2379
                     /gene="pruA"
                     /locus_tag="QF480_04490"
                     /EC_number="1.2.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009136740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003842 - 1-pyrroline-5-carboxylate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0006562 - proline catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-glutamate gamma-semialdehyde dehydrogenase"
                     /protein_id="HJN05850.1"
                     /translation="MYKDLQSVPKAYNEPVKSYLPGSPEREEIIKTIAQLKSTVLDIP
                     MVIGGKRITSDEKVSIHPPHNLNHLLGYFYRGTVDHVNTAIEAALEASKKWSQMPWEH
                     RAAIFLRMADLLSGPYRAKINATTMLAQSKTVHQAEIDAACELADFLRFNVQYMTEIY
                     AQQPESEPAIWNRLEYRPLEGFVYALTPFNFTSIAGNLPTAPALMGNTVVWKCSNTQV
                     YSAKVLMDLFEEAGLPDGVINLVFVTGPVGGKAVMEHPDFAGFHFTGSTGVFQHIWQT
                     IGANIATYKTYPRIVGETGGKDFVMVHPSANTDQVVTALVRGAFEFQGQKCSAASRAY
                     VPVSLWEEIKEKLVAQVDGIKMGDPEDFTNFMCAVIDKPSFDKLSMFIDNANKDEDAE
                     IIAGGDYDDSKGYFIRPTVIVTTDPRYITMEEELFGPVLTIYVYEDDKWEETLDILDD
                     TSPYALTGAVFSNDRYATEYAVNRLSQTAGNFYINDKPTGAVVGQQPFGGARASGTND
                     KAGSILNLFRWTSPRTIKENFVPPVDYRYPFMQED"
BASE COUNT          774 a          465 c          490 g          733 t
ORIGIN      
        1 cgacgggttg aagtagtatt aagatttaca ttaaatgcaa ccagaaagtc gcgggcacca
       61 acagcagtta caccactacc ggcaacacgt tcgttgaatt ccgcaggacc aaaatcaggt
      121 ttccattgtg gatctctaag cttttccttt aatccctcat actctcctga tcgacacgta
      181 gccaagtttc ttctttcctc tgcaaaagca gcattttcat aacaataaac aggtatcttt
      241 aactcattac caatacgctc agccagtttg cgagcataca caactgtttc ctccatttta
      301 atgttagcta caggtaccag tgggcaaaca tctgttgcac caaaccgggg atgctctcct
      361 ttctgatgtc gcatatcaat aacttcggct gcctttttta ttgcaacaaa tgcagcttct
      421 atgacctcat caggtgtacc taccatagtt acaacagtac gatttgttgc agcaccggga
      481 tcaacatcga gtagttttac tccctctatc ttttcaattt catcagtaat ttgcttaatg
      541 actgtcatat cacgaccttc actaaaatta ggaacacact ctataagttg tctcatctca
      601 tttctgttaa agtaatttat gaagtgcaaa aatagaaaat gtagtataac tttttcaata
      661 ataatagtta tatatttcat aattgactta acaatattta ttaatttcgc ccgcaaatta
      721 ttgatgaatt ttaaagagtt ttaagtaatg tataaagatc ttcagagtgt gccaaaagca
      781 tataacgaac cagtaaaatc atatttacca gggtcacccg aaagggaaga gataataaaa
      841 acaattgcac agttaaaatc gacagtgtta gatattccaa tggtaatagg cggcaaaagg
      901 ataacatctg acgagaaagt cagtattcat cctccacaca acctaaatca tttgcttggc
      961 tatttttaca gaggtacggt tgaccatgta aatacggcta ttgaagctgc tttggaagct
     1021 tcaaaaaaat ggagccaaat gccatgggaa catcgtgcag caatattttt aagaatggcg
     1081 gatttattgt caggtccata tcgtgcaaaa ataaatgcta ctactatgct tgcacagtca
     1141 aaaactgtac atcaggctga gattgatgct gcttgtgagt tggctgattt tttgagattc
     1201 aacgtgcaat atatgactga gatatatgcg caacagccgg aatcagaacc tgcaatctgg
     1261 aacagacttg aatatcgtcc gttagaaggt tttgtgtatg cacttacacc ttttaacttt
     1321 acatcgattg ccggaaacct accaactgca cctgcactga tgggcaacac agttgtttgg
     1381 aaatgttcaa acactcaggt ttattctgca aaagtattga tggatctttt tgaagaagcg
     1441 gggcttcctg atggagtaat taatcttgtt tttgtaacag gccctgtagg tggtaaagct
     1501 gtaatggaac atccagattt tgcaggattt cactttacgg gctcaacagg agtgtttcaa
     1561 cacatttggc aaactattgg agcaaatatt gcaacatata aaacttatcc caggattgtt
     1621 ggagaaacag gtggtaaaga ttttgtgatg gttcatcctt ctgctaatac tgaccaggtt
     1681 gtaacggctt tggttagagg tgcttttgaa ttccaggggc aaaaatgttc ggctgcatca
     1741 cgagcatatg ttccagtaag tctttgggaa gaaattaaag aaaaacttgt tgcacaggtt
     1801 gatggtatta aaatgggtga tccggaagac tttacaaact ttatgtgtgc tgtgatcgac
     1861 aaaccttcat tcgataaatt atctatgttt attgataacg ctaataagga tgaagatgct
     1921 gaaattattg ccggtggtga ttatgatgat tcaaagggat attttatcag gccaactgtc
     1981 atagttacaa cagacccacg atatataaca atggaagaag agttgtttgg acctgttctc
     2041 acaatttatg tttatgaaga tgacaagtgg gaagaaacac ttgatatcct tgatgacacc
     2101 tcaccatatg cattaacagg agctgtattt tcaaacgacc gttatgcgac tgaatatgct
     2161 gtaaatcgtc tttcgcagac agctggtaat ttttatataa acgataagcc aactggagca
     2221 gttgttggtc aacagccatt tggcggagcc agggcatccg gcacaaatga taaagcagga
     2281 tcaatcctca accttttcag gtggacatca ccacgaacaa ttaaggagaa ttttgtgcct
     2341 cctgttgatt acaggtatcc atttatgcaa gaagattagt acgaaatata tttcgatttt
     2401 aacccgatgt caacaacctg agaagaagtt gttcattcgg gggggtaaga gaacaaaaaa
     2461 ag
//
LOCUS       DASCQP010000267         2420 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001006653, whole genome shotgun sequence.
ACCESSION   DASCQP010000267 DASCQP010000000
VERSION     DASCQP010000267.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2420)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2420)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2420
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001006653"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1385
                     /locus_tag="QF480_04495"
     CDS             <1..1385
                     /locus_tag="QF480_04495"
                     /EC_number="1.17.7.3"
                     /inference="COORDINATES: protein motif:HMM:NF016438.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HJN05851.1"
                     /translation="TTRNSKEAENLKNIKHELQKAGVEVPLIADVHFNPRVAETAAQF
                     VEKVRINPGNYIDKEREGKANQEYDDNDVLEGITKQLSPLIKICKQFGTAIRIGVNHG
                     SLSERILVKYGNTALGMVESIVEFVQVCNRLDFHSLVLSLKASNVITMIEVNILLVER
                     LSKIGSSYPIHLGVTEAGSGEEGRIKSVAGIGYLLAHGIGDTIRVSLAEDPLEEIPVA
                     QKLVDIFGQRKDITNKIKPETFHFPKSRFSIKPPVVLTSGYSSFSDLSVDKYENTHPI
                     PKQSSHSERSEACLPNRQESKFDTFLIQKFSYKGLSYDDLVVTAAVEVSTVLLDQETD
                     GIWIQNPDATSYDNIAKLALSILQVLGLRISKTEYVACPTCGRSEINVIKQLENIKER
                     TSNLPGLKIAVMGCAVNGPGEMDDSHYGCVGTGKGMVNIYEGSNVVQRNVHQELATDS
                     IIKLIKENGY"
     gene            1583..1876
                     /locus_tag="QF480_04500"
     CDS             1583..1876
                     /locus_tag="QF480_04500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006842607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HJN05852.1"
                     /translation="MKEIIANLNKIFDNRIRIGIMSILMRGSWVDFTVLRDTLQATDG
                     NLSSHLSALEKENMLKLKKRFVNNRPRTSYKITHHGFRKFTLHLEAFEKLIKK"
     gene            complement(2065..>2420)
                     /locus_tag="QF480_04505"
     CDS             complement(2065..>2420)
                     /locus_tag="QF480_04505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05853.1"
                     /translation="IVTNDQSDDIWNNSVVVYPKQKNIYYYVFASCYCDLNGDGKDEY
                     HVFFSPIKKQYVQYELQRKFNKIIRDIYPQWADFDQANIIENGFPTMQKAIESKQIAI
                     KEYQSKYFKAHDLQW"
BASE COUNT          844 a          383 c          434 g          759 t
ORIGIN      
        1 tcaccacccg aaatagtaaa gaagctgaaa atctaaaaaa cataaagcat gaacttcaaa
       61 aagcgggagt agaggtgccc ctaattgccg atgtacattt taatccaagg gtagcagaaa
      121 cagctgctca atttgtagaa aaggttcgaa ttaatcccgg aaactatatt gacaaagaaa
      181 gggaaggtaa agcaaatcag gaatatgatg ataacgatgt gcttgaaggg ataacgaaac
      241 aattaagccc tctgattaaa atctgcaagc aatttggtac agctatcaga ataggagtaa
      301 accacggttc attatctgaa agaatactcg ttaaatatgg aaatactgcg ttaggaatgg
      361 tcgagtctat tgtggaattt gtacaagtat gtaataggct ggattttcac agcttggtac
      421 tttctcttaa agcaagcaat gttattacta tgattgaagt caacatactt ttagtagaaa
      481 gattatcaaa gatcggatca agttacccta ttcatcttgg agttacagag gctggtagtg
      541 gtgaggaagg aaggataaaa tcagtagctg gcatagggta tttattagca catggaattg
      601 gtgatacaat tcgcgtttca cttgctgaag atccattaga agaaatacca gttgctcaaa
      661 agctcgttga tattttcggt cagagaaaag atataacaaa caaaattaag ccagaaacat
      721 ttcattttcc taaaagtaga tttagtataa aacctcctgt cgttttaaca tccggatatt
      781 catcattttc tgatttatca gttgataagt acgaaaacac ccacccaata cccaagcaaa
      841 gtagtcattc tgaacgaagt gaagcctgtc tgccgaacag gcaggaatct aaatttgata
      901 cttttttaat tcaaaagttc agttataagg gattatcata cgatgacctc gttgtcactg
      961 cagctgttga ggtatcgaca gtattactag accaggaaac cgatggaatt tggattcaga
     1021 accccgacgc aacttcatat gacaacattg caaaactagc ccttagcata cttcaggtat
     1081 tgggattgcg aatatctaaa accgaatatg ttgcctgccc cacttgtggc agatcggaaa
     1141 taaatgtaat aaagcaactt gaaaatatta aagagagaac atcaaatttg cctggactca
     1201 aaatcgctgt tatgggttgt gctgttaatg gtcctggcga aatggacgat tcacattacg
     1261 gctgtgttgg aactggaaaa gggatggtta atatttatga gggcagcaat gtagttcaga
     1321 ggaacgtcca tcaggaatta gctacagatt ctataattaa gcttattaaa gaaaacggct
     1381 actagcgtaa tatttaagtc tatttttata tttgtgatta tctatttact agtaccttta
     1441 ccaaacttca agtttccatc tccggacttc atacttaata aatattttgc acgttaagct
     1501 acggcaagta aaactataat attaatattt gatacatgta aattattttt attaactttg
     1561 taatgcaaag cactctgtag ttatgaaaga aattattgct aatcttaaca aaattttcga
     1621 taatcgaatt agaataggca taatgtcaat attaatgaga ggtagctggg tagatttcac
     1681 agtgttacga gacacacttc aggctactga tggaaatctt tccagtcatc taagtgctct
     1741 tgaaaaggag aatatgttaa agttaaaaaa acggtttgtt aacaatagac caagaacaag
     1801 ttataagatc acacatcatg gcttcaggaa atttacttta catttagagg cttttgaaaa
     1861 gttaatcaaa aaatgaactt tgaaaatcaa agtactttgg ataatattat ttgtgtacta
     1921 atcaaccact tacaagttaa atttcttaag agaaggaatt tattttcaga atgttcaatt
     1981 caattagata gataagtaca gatttagcat gtgttgtcag aaaaaactag tgatatattt
     2041 ttaaagagcc aaaatgctta tttattacca ctgcaaatcg tgtgctttaa aatatttgga
     2101 ttggtattcc tttatagcaa tttgttttga ctcaattgct ttttgcattg ttggaaaacc
     2161 attttcgatt atgtttgcct gatcaaaatc agcccattga ggataaatat ctctaattat
     2221 cttgttaaat tttctctgta attcatattg tacatactgt ttttttattg ggctaaaaaa
     2281 tacatgatat tcatcctttc catccccgtt taaatcacaa tagcatgaag caaatacata
     2341 gtaatatata ttcttctgct ttggataaac cacaactgaa ttattccaaa tatcatcact
     2401 ttgatcatta gttactatat
//
LOCUS       DASCQP010000268         1637 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001007632, whole genome shotgun sequence.
ACCESSION   DASCQP010000268 DASCQP010000000
VERSION     DASCQP010000268.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1637)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1637)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1637
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001007632"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..192
                     /locus_tag="QF480_04510"
     CDS             <1..192
                     /locus_tag="QF480_04510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HJN05854.1"
                     /translation="LKEGVKNVILIGKDFSNTHGHNFSKFISPDDAKMHLSKIKVRNS
                     TILVKGSRGMELEKLLDVL"
     gene            212..1270
                     /locus_tag="QF480_04515"
     CDS             212..1270
                     /locus_tag="QF480_04515"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: protein motif:HMM:NF007144.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HJN05855.1"
                     /translation="MKKNKVIGLMSGSSLDGVDIAYCEFYYDTKWHYSIIKADTIPYI
                     EEWRIVLTELPEQKGDKLIEYDISYGNYLGNIVNDFIESQQLNPDLISSHGHTIFHKP
                     DKGYTFQLGNGQAIASSTGINTICDFRIGDIQHGGQGAPLVPIGDELLFPEYDFCINL
                     GGIANISYVSEGKRIAFDICAANQLLNHLSHQIGKPFDENGNIAQLGKLNTDLFEKLN
                     NHPYFNLDYPKSISNQLITDTFINLLDDSDASVEDSLYTVCKHIAYQINQAINDVEGD
                     TKLITGGGAHNDFLITAIQKEIQRKLTIPDKMIVDYKEAMIFAFMGVLRFEGQINCLA
                     SSTGASRDSSVGVIYIPS"
     gene            complement(1318..>1637)
                     /locus_tag="QF480_04520"
     CDS             complement(1318..>1637)
                     /locus_tag="QF480_04520"
                     /inference="COORDINATES: protein motif:HMM:NF014818.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HJN05856.1"
                     /translation="LDGMAIRIPTPTGSLVDLVVNLKTEASKDEINAAMKEASEGPMK
                     GILEFQEDPIVSVDIIHNSHSSIYDQDSLMVQGKTIKILSWYDNEWGYSCRVVDLINL
                     FNL"
BASE COUNT          554 a          283 c          288 g          512 t
ORIGIN      
        1 ctaaaagagg gtgtgaaaaa tgtaatccta atcggaaaag attttagtaa tactcatggt
       61 cataattttt caaaatttat ttcacctgat gacgctaaaa tgcacttaag taagatcaag
      121 gtcagaaact ctacaattct ggtcaaaggt tcaagaggaa tggagcttga aaaactccta
      181 gatgtattgt aatagatgat atcaaaatga tgtgaaaaaa aataaggtca taggattaat
      241 gtccggaagc tcattagatg gagttgatat tgcctactgt gagttttatt acgacacaaa
      301 gtggcattac agtatcatta aagctgatac aatcccttat attgaagaat ggagaattgt
      361 gcttacggaa ttacctgaac aaaaaggtga taaactaatt gaatatgata tctcttatgg
      421 caattatctt ggtaatattg taaacgattt cattgagagt cagcaattaa atcctgatct
      481 catctcttca cacggacata caatctttca taagccggat aaaggatata ctttccaatt
      541 agggaacggg caggcgatag cttcttctac cggaataaat acaatttgtg attttcgtat
      601 tggagatata cagcacggcg gtcagggagc tcctttggtt cctattggcg acgaattact
      661 ttttccagaa tacgattttt gtataaatct gggtggaatt gcaaatattt cgtatgtaag
      721 tgaaggaaaa agaattgcat ttgacatatg cgctgcaaac caacttctga accatctaag
      781 tcatcaaata ggaaaaccat ttgatgagaa cggaaatatt gctcaattag gcaagttaaa
      841 tactgacctt ttcgaaaaac taaataatca tccctacttt aaccttgatt atccaaaatc
      901 tattagtaat caactcatca ctgatacatt tattaattta ttagatgatt ctgacgcaag
      961 tgtggaggat agtttataca ctgtttgcaa acacatagca tatcaaatca atcaggccat
     1021 aaacgatgtt gaaggtgata cgaaacttat aactggagga ggtgcacaca atgatttcct
     1081 gataacagca attcaaaaag aaatccaacg aaagttaaca atacctgata aaatgattgt
     1141 tgattataaa gaggcaatga tttttgcttt tatgggtgta ttgcgctttg aaggacaaat
     1201 aaattgccta gcgtcatcta ccggtgcaag cagggatagt tccgtaggtg taatttatat
     1261 tccttcataa tttatgtatc ccaaaatcca cttttaggta tttcgcagct atccatatta
     1321 caaattaaac agattaatta aatcaaccac acggcacgaa tacccccact cgttgtcgta
     1381 ccatgaaagt attttaatcg tttttccctg aaccatcaga ctatcttggt cataaattga
     1441 agaatgacta ttatgaatta tgtcaaccga aacaattggg tcttcctgaa attctaatat
     1501 tcctttcatc ggaccttctg aggcttcctt catcgcagca tttatttcat ctttagacgc
     1561 ctctgttttt aaatttacta ccaaatcaac taatgaccct gttggtgttg gaattcgaat
     1621 tgccattcca tcaagtt
//
LOCUS       DASCQP010000269         2705 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001007645, whole genome shotgun sequence.
ACCESSION   DASCQP010000269 DASCQP010000000
VERSION     DASCQP010000269.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2705)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2705)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2705
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001007645"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..356)
                     /locus_tag="QF480_04525"
     CDS             complement(<1..356)
                     /locus_tag="QF480_04525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05857.1"
                     /translation="MKNLQAISLVILLSAVIFSTQAQPWNSLLPIDKVENGSLTFFDI
                     QKAFNDYWTPKNVEDGYYYVNGVRTKAGGWKQFKRWEWYWENRVDPTTGVFPNTSAWE
                     EYQKIKKAARGNKSPSG"
     gene            597..1139
                     /locus_tag="QF480_04530"
     CDS             597..1139
                     /locus_tag="QF480_04530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005936577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HJN05858.1"
                     /translation="MKKGLFFILSIIIIALISCNEHPVVKGDRGYHVKVGDTVKDINF
                     TLTDGSTLSLSELVGKVIVLQFTASWCSVCRKEMPFLERDVWQKYKDMDFVLIGVDYD
                     EPLDTVIAFVEKMKTSYPMALDPQGDIFAKFAYKNSGVTRNVVIDREGKIAYLTRLFN
                     KEEFDLMKGKIEELIQDQKP"
     gene            complement(1117..1965)
                     /locus_tag="QF480_04535"
     CDS             complement(1117..1965)
                     /locus_tag="QF480_04535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05859.1"
                     /translation="MNSIVSRGLITGLFLLIIFVFTSCHKKNSSFDYNQAIETVSDYV
                     ESQQMTDLLLNTYFKSITDSILLMDGVAEIDGADVSFSLEPAIIVIDYHAWGNDDGYG
                     HFRSGMYEATTETGFFDSLAVVNFAFSNFFYDFDSVSVSHLSLVNRGITNDGNYLFNI
                     DATDIYREFNDTSGHIVYQFQQDFLRHKSTSSLYYSDNDYFDISGNLSGVARNGYAFT
                     SIIQDTSVLRNSFSCRWLNGGISDVELPDFIYNAKVNFSNDGQCLNKYSIITNETLLI
                     KAFDPE"
     gene            complement(1968..2462)
                     /locus_tag="QF480_04540"
     CDS             complement(1968..2462)
                     /locus_tag="QF480_04540"
                     /EC_number="1.5.1.3"
                     /inference="COORDINATES: protein motif:HMM:NF012413.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004146 - dihydrofolate reductase activity
                     [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HJN05860.1"
                     /translation="MTKDISIIVAIASNYAIGKDNDLLWHISKDLVRFKQITNGHYII
                     MGKRTYFSLPKRPLPNRTNMIITDVANEQIDDCIMAYSIDDAVNKMDSAKENFIIGGG
                     SIYSQFMPLANKLYITRVHKDFDADTFFSEISLNEWELTYQQLVDDDPQNDFNYTFEI
                     YNRK"
     gene            complement(2495..>2705)
                     /locus_tag="QF480_04545"
     CDS             complement(2495..>2705)
                     /locus_tag="QF480_04545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019539252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HJN05861.1"
                     /translation="EGDFVHTFGDAHIYLNHIDQVKLQLSRKPNKLPVMEINPLVDDI
                     FSFKFDDFNIKGYYPHPTIKGKISV"
BASE COUNT          880 a          428 c          460 g          937 t
ORIGIN      
        1 ccacttggac ttttattacc cctagctgct tttttaattt tttgatattc ttcccatgca
       61 gaagtgtttg ggaaaactcc tgtagtagga tcgactctat tttcccagta ccattcccat
      121 cgtttaaatt gtttccagcc acctgctttc gttcttacgc catttacata atagtaacca
      181 tcctcaacat tttttggtgt ccaatagtcg ttaaatgcct tttgaatatc gaaaaaggtt
      241 aaagagccat tttcaacttt gtctatgggt agcagggagt tccagggttg tgcttgtgtg
      301 ctaaaaataa cagcacttaa taaaattact aagctaattg cttgtaggtt tttcatagtt
      361 gtattatttg ttttatgtca aaattagaaa taattttcat atttttctct taagatatat
      421 ggctcgagac tttaataata tatcaaatta cttaagttaa ttactgtaaa gccttttatt
      481 gcaatagact aggtgtaatt agggttttta tatgaaataa taaattaact ttttattaac
      541 gctgcttttt ttgataaact acattttatt attttcgtca taaaaaaacc tataaaatga
      601 agaaaggatt gtttttcata cttagtatta tcattattgc tttaatatca tgcaatgaac
      661 atcctgtagt gaaaggtgat aggggttatc atgttaaagt tggtgatact gtgaaggata
      721 ttaatttcac gttaacagat gggtctactc tatcgctttc agagctagta ggtaaggtaa
      781 tagtgttaca atttacggca agttggtgct ctgtatgcag aaaagaaatg ccttttcttg
      841 agcgtgatgt atggcaaaaa tacaaggaca tggattttgt cttaatcgga gttgattacg
      901 atgaaccgct tgatactgta atagcttttg tagaaaaaat gaaaacctcg taccctatgg
      961 cccttgatcc gcagggagat atattcgcaa agtttgccta caaaaatagt ggtgttacaa
     1021 gaaatgttgt tattgataga gaggggaaga ttgcatacct gacaaggctt tttaataaag
     1081 aagagtttga tttgatgaaa ggtaagatag aagaacttat tcaggatcaa aagccttaat
     1141 tagtaaagtt tcgtttgtaa ttatagaata tttattcagg cattgcccat catttgaaaa
     1201 gttaactttc gcattgtaaa taaaatcagg tagttctacg tcggatatac caccattaag
     1261 ccacctgcag gagaatgaat tccttaacac acttgtatct tgaataatgc tggtaaaagc
     1321 atagccgttt cttgcaacac cactcaggtt tcctgatata tcgaaataat cattatcaga
     1381 ataatataat gaagacgttg acttatgacg cagaaaatcc tgttggaact gatatactat
     1441 gtggcctgat gtatcattga attcacggta aatatcagtg gcatcaatat taaacaaata
     1501 attgccatca tttgtaatac ctctgttaac gagggataaa tgactaacac ttaccgaatc
     1561 gaaatcatag aagaaattgg agaatgcaaa attcacaaca gccagtgaat cgaaaaagcc
     1621 agtttccgtg gttgcttcgt acattcctga tctgaagtgt ccataaccgt catcatttcc
     1681 ccaagcgtga taatcaataa caattattgc aggctctaac gaaaagctaa catcagctcc
     1741 atcaatttcc gcaactccat ccattagcag tatagaatcg gtaattgatt taaaataggt
     1801 atttaacagt aaatctgtca tttgttgcga ttcaacgtag tcagaaactg tttcaatagc
     1861 ctgattgtaa tcaaatgagc tgtttttctt atggcaggat gtaaatacga atataattaa
     1921 taaaaagagg cctgttatta aacctctgga aacaatgctg ttcataatta ttttctgttg
     1981 taaatttcga aagtgtaatt aaaatcattt tggggatcat catcaaccaa ctgttgatat
     2041 gttaactccc attcgtttaa cgaaatttca gaaaaaaaag tatcggcatc gaaatccttg
     2101 tgtacacgag ttatatagag tttattagct aatggcataa actgactata aattgatcct
     2161 cctccaatta taaaattttc ttttgcgcta tccattttat tcacagcgtc atcaattgaa
     2221 taagccatta tgcaatcatc tatttgttca tttgcgacat ctgttataat catatttgta
     2281 cgatttggta gtggtctttt gggaagagaa aaataagttc gttttcccat tataatataa
     2341 tgaccattag ttatttgctt gaagcggact aaatcttttg aaatgtgcca gaggagatca
     2401 ttatcttttc caatggcata attggatgct attgctacta ttattgagat gtcttttgtc
     2461 attctgtgat tcttaaaact tagagaatag tttattaaac tgaaattttt cctttaattg
     2521 taggatgagg atagtatcct ttgatattaa aatcatcaaa tttaaaacta aaaatatcat
     2581 caactaatgg attaatttcc ataacaggta atttattcgg cttacggctt agctgcaatt
     2641 ttacttggtc tatatggttt aaataaatat gagcatcacc aaaagtatgt acaaaatcac
     2701 cttct
//
LOCUS       DASCQP010000270         2678 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001014696, whole genome shotgun sequence.
ACCESSION   DASCQP010000270 DASCQP010000000
VERSION     DASCQP010000270.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2678)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2678)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2678
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001014696"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(81..1388)
                     /gene="der"
                     /locus_tag="QF480_04550"
     CDS             complement(81..1388)
                     /gene="der"
                     /locus_tag="QF480_04550"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010264358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HJN05862.1"
                     /translation="MNTIAIVGRPNVGKSTLFNRLLETKEAIVESVSGVTRDRIYGKS
                     DWNGYEFSVIDTGGYVHGSDDTFEDEIRKQVLFAIDESDAIIFMVDSHSGINPLDEEV
                     ANLLRRSNKDIFTVANKVDSPNQTNTIAEFYALGLGDVFAISAVNGSGTGELLDEVVK
                     VFSNKTIIDEETDLPRIAFIGRPNVGKSSIINTLLGDKRNIVTPIAGTTRDSIYTRYN
                     AFGHDFMLVDTAGLRKKGKVYENIEFYSTLRTIRAIENSDVCVVMIDAKSGIEKQDVA
                     IFHLAQKNNKGIVLVVNKWDLINKETNTHLTFEKEIKEKIAPFKDVPIVFTSVTDKQR
                     IFKTLELAAEVYKRRTQHIPTSKLNDFLLPIIENTPPPMGSRGRYVRIKYVMQLKTAT
                     PMFAFFCNLPDDVKDSYSRFLENKIRDHYDFTGVPIQIFFRKK"
     gene            complement(1466..2344)
                     /gene="era"
                     /locus_tag="QF480_04555"
     CDS             complement(1466..2344)
                     /gene="era"
                     /locus_tag="QF480_04555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009135020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HJN05863.1"
                     /translation="MHKAGFVNIIGYPNVGKSTLMNSMVGEKLSIITSKAQTTRHRIM
                     GIVNGDDFQIVYSDTPGIVKNPSYKMHQFMNLYINSALKDADILILMTEPDYDFAEQD
                     IIDKFNESDVQVLIVINKIDLSNQQAIMDEMVMWNTKMPKAEVIPVSALNNFNIEKLF
                     DRIIHYLPEHEAFYPKDELTDKSVRFFISEIIREKILQNYKKEIPYSAEVAIDQYKEE
                     EKLVRISAIIYVTRETQKAIILGHQGNAIKKTATAARLDIEDFIGKKVFLEITVKVSK
                     DWRDNENTLKRFGYDQ"
     gene            2445..2516
                     /locus_tag="QF480_04560"
     tRNA            2445..2516
                     /locus_tag="QF480_04560"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2477..2479,aa:Met,seq:cat)
BASE COUNT          787 a          509 c          427 g          955 t
ORIGIN      
        1 ccttttattt tttgattcta agtttttcta ctttcttcct gcttcggtct tccatcttcg
       61 ttcttctagc ttccaacttc ctacttcttc ctaaaaaata tttgaattgg cactccggta
      121 aagtcgtaat gatccctaat tttattttcc aggaatctgc tatatgaatc tttaacatcg
      181 tctggcaggt tacaaaaaaa ggcaaacatt ggagtggcag ttttaagctg cataacatat
      241 ttaatcctta catatcttcc tcttgatccc attggaggag gtgtattttc tataataggt
      301 aatagaaaat cattaagttt agatgttggg atatgttgtg ttctcctctt ataaacttct
      361 gcagctagtt ccagcgtttt aaaaattcgt tgtttatctg ttacagatgt aaatacaatc
      421 ggaacatctt taaatggagc aattttttct ttgatttcct tttcaaatgt gagatgagta
      481 ttggtttctt tattgatcag atcccatttg ttaacaacca aaactattcc tttattattt
      541 ttttgagcca gatggaagat tgcaacatct tgtttttcaa tacccgattt ggcatcaatc
      601 ataaccacac aaacatcaga gttttcgata gctctgattg ttcttagggt tgaataaaac
      661 tcaatgtttt cataaacttt cccttttttt cggagacccg cagtatctac aagcatgaaa
      721 tcatggccaa aagcattata tctggtataa attgaatcac gagttgttcc tgcaattgga
      781 gttactatgt ttcgtttgtc gcctaacaag gtattgataa ttgaagattt gccaacattg
      841 ggtcttccaa taaaagcaat acgaggtaag tcagtttctt catcaattat cgttttattt
      901 gaaaaaactt taactacttc atcaagcagt tcacctgttc cgcttccgtt tacagccgaa
      961 atggcaaaaa catctcctaa tccaagagca taaaattcgg cgattgtatt tgtttgattg
     1021 ggactatcaa ctttgttagc aacagtaaaa atgtctttgt ttgatcttct aagaaggttt
     1081 gccacctctt catccagcgg atttattcct gaatgcgaat caaccataaa tataatagcg
     1141 tccgattcat caattgcaaa caaaacctgt ttacgtattt catcttcaaa agtatcatcc
     1201 gaaccatgga cataaccacc agtatcgata actgaaaatt cataaccgtt ccagtcgctt
     1261 ttaccataaa ttctgtctcg tgtaacacca cttactgatt caacaatagc ttctttggtt
     1321 tctaataatc tgttaaacaa ggttgattta ccaacgtttg gccttccaac tatggctatt
     1381 gtgttcattg caattttatt tttgtaatta ttgttctctg aataacaaca aagtatctaa
     1441 aagttaggtc tatatgttgc tatactcact gatcatatcc aaaacgctta agtgtatttt
     1501 cgttatctcg ccagtcctta cttactttaa ctgtaatctc aagaaatact tttttgccaa
     1561 taaaatcctc aatgtctaat cgtgcagctg ttgcagtttt tttaatggca ttaccttgat
     1621 gaccaagtat tattgccttc tgggtttcgc gggtaacata tataatagcc gatatgcgta
     1681 ctaacttttc ttcctcttta tactgatcga ttgcaacttc agctgaataa ggaatctcct
     1741 ttttgtagtt ctgtagtatt ttttcacgta ttatttctga aataaaaaat ctaactgatt
     1801 tgtcggttag ttcatctttt ggatagaaag cctcatgctc cggcaggtaa tggatgattc
     1861 tgtcaaataa tttctcaatg ttaaaattgt tcagggcgct aacaggaata acctcagcct
     1921 ttggcatttt tgtattccac attaccatct cgtccataat tgcctgttga tttgataaat
     1981 caattttatt aatcacaatt aatacctgta catctgattc gttaaattta tcaataatat
     2041 cttgctccgc aaaatcataa tcgggttcag tcattaaaat tagtatatca gcatccttta
     2101 aagctgaatt aatatacaaa ttcataaact gatgcatttt ataagatgga tttttaacta
     2161 ttcctggcgt gtcggaatat acaatttgaa aatcatcacc gtttacaata cccattatcc
     2221 tatgccttgt tgtttgagct ttagatgtta tgatagatag tttctcacct accattgaat
     2281 tcatcaaggt tgactttcca acattagggt aaccgatgat atttacgaag cctgctttat
     2341 gcataaatct tatgaaaaag tttgcacagc aaagaaacaa aatatatctt tgcagcccct
     2401 ttttactgga tagtttaatt agttcataat tgataaaaat atattgcggg gtggagcaga
     2461 ggtagctcgt tgggctcata acccaaaggt cgtcagttcg aatctggccc ccgctacaat
     2521 gaaaaacctc acacgaaagt gtggggtttt tttattttgc agaaggcagc aaattgattt
     2581 gctagccgtg gtgcaaatca ataagccaca aaccctacgg gtttgggttt tcattgtaaa
     2641 gccccctata ccagataaac gacaggtagg gagttaat
//
LOCUS       DASCQP010000271         5966 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001015555, whole genome shotgun sequence.
ACCESSION   DASCQP010000271 DASCQP010000000
VERSION     DASCQP010000271.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 5966)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5966)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5966
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001015555"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..586
                     /locus_tag="QF480_04565"
     CDS             <1..586
                     /locus_tag="QF480_04565"
                     /inference="COORDINATES: protein motif:HMM:NF024271.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF3822 family protein"
                     /protein_id="HJN05864.1"
                     /translation="LIPEALFSEDHKNLYLGFNQPFQENSRIVFDRLKNNQAVNIYYL
                     PNFVVEKAKDFWPNVNLLHFSTAMIESLSINFKNKVDKKTLFVNLRDDCFDVVYFKEN
                     KLHFYNSFDFHTKEDFIYFLLISIEQLMLNPEDVNLIISGNIKETDQTYKMIHQYIKN
                     YSFISRNDNYSYSFVLDELKYYKYYILFNALQCE"
     gene            577..1050
                     /locus_tag="QF480_04570"
     CDS             577..1050
                     /locus_tag="QF480_04570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009276477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RsmD family RNA methyltransferase"
                     /protein_id="HJN05865.1"
                     /translation="MRIISGRYKRRVISPPNDLPVRPTTDMAKESLFNVLSNYVDFSE
                     KTVLDLYAGTGNISYEFVSRGCSSVTAVDKDFGCTKFIIKTAQQLEMKELNVTKLDAS
                     RFIETAKNKYDIIFADPPYKLTNIDFSGLLHFYEHRKYGRVNFSFFQLEGEQKRL"
     gene            complement(1195..1533)
                     /gene="ssb"
                     /locus_tag="QF480_04575"
     CDS             complement(1195..1533)
                     /gene="ssb"
                     /locus_tag="QF480_04575"
                     /inference="COORDINATES: protein motif:HMM:TIGR00621.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HJN05866.1"
                     /translation="MTTLKNSVQLIGRLGIDPETSTFGENKTKVKFSLATSTYYKDKE
                     GERVEETQWHNIVAWGNVANIADKYLKKGQEIALSGKLTYRSWDDKEGTTRYITEVVA
                     NEILMLEKKK"
     gene            1963..2730
                     /locus_tag="QF480_04580"
     CDS             1963..2730
                     /locus_tag="QF480_04580"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013672.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HJN05867.1"
                     /translation="MSNRINSITIIVIILIITGSYFNLTSLYYLIPIIILYIIVNIMG
                     STSIGLNYYFHSYSNASTTKKDIAITFDDGPHPHITPKLIELLDSHNVKATFFCIGKN
                     VRAHPNIVVDIIDKGHLVGNHSYRHSKFFDLLSSKNMQKEMVETNQILESITGKSPKL
                     FRPPFGITNPMLRKAISRTNMVSVGWSLRLFDTVKDPKNVIAKLVTNTKPGDVVLFHD
                     TNKNILEIVEEYLLWLKKNDYKIVSLTSLLNIEAYED"
     gene            2720..3370
                     /locus_tag="QF480_04585"
     CDS             2720..3370
                     /locus_tag="QF480_04585"
                     /inference="COORDINATES: protein motif:HMM:NF015510.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA];
                     GO_process: GO:0044874 - lipoprotein localization to outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein carrier protein LolA"
                     /protein_id="HJN05868.1"
                     /translation="MKINLQIIIVVFLIAWSFMLCGQDKEFKTVANIDKLKSKLETHS
                     NNTNTIESDFIQKKHLWMLNEVLISEGKFLFKKQNNVKWQYVTPIEYTIIIHNGIFTI
                     INNHKVKEFNINSNPLFHEINKMIVTAIRGDFIDNPDFSAEFFENQANYLAKLVPTNI
                     NVSSILENIEIYFNKQNMQVVKVVFHEPGDDFTSITFLNKKINSELSDDRFLSDTK"
     gene            3367..4011
                     /locus_tag="QF480_04590"
     CDS             3367..4011
                     /locus_tag="QF480_04590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05869.1"
                     /translation="MKNFCPIIKLRLAIGLLISILFIISSCSIAGYKPVANSEEYQIN
                     KLYIFDNDFKKALYKTNINIYGNNLTGLTLMKKTDSAMRVVSMSELGIKYFDFEFPDD
                     TQKEFKVHYVMEPLNKEFVINKISKEFTFMFFLPDITRSQIKIFRNDSSNLIIKHKNL
                     VYFFDQSGAVTKICLQRWPLHLKSIISLSDYKHSFPETIFINKGKISIDLELID"
     gene            complement(4063..4866)
                     /locus_tag="QF480_04595"
     CDS             complement(4063..4866)
                     /locus_tag="QF480_04595"
                     /inference="COORDINATES: protein motif:HMM:NF014414.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HJN05870.1"
                     /translation="MKRVGIHKPTVEDAIEISGIEILHPGGFELTQRTAEICNLKSGM
                     KILDVSSGRGTQALYYAKTFGVNVTGIDISPDMIKTATMAAKENGLTEQVNFIEGDSQ
                     NLPFGANLFDAVINECAVGIPDDSQKVLDEMVRVVKPGGAIAIHESTWKKTIPKNEKE
                     EISERYGTTPLEFDEWIAMLKKAGTTNIISEFDRWSKPEMFWNIRKDRKVNSFKSVMT
                     TSEKLKTACRICKIYGIKGVIKVFQNEKIFYKTILEGKLGYALFKGIKG"
     gene            complement(4863..5294)
                     /locus_tag="QF480_04600"
     CDS             complement(4863..5294)
                     /locus_tag="QF480_04600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05871.1"
                     /translation="MKNLYLIISVVLALSITSCSTMKSGSKDSNTTVSKERMQMDAIA
                     LANIECAYKLSLLKLEDNRNDFNLQSQFNTVRQDITALSKIINKRYNQTKGLRDELNN
                     MVKRFKEDLTTCQQLQEYENIRAEKNVEEPDTDKNNTKDKK"
     gene            complement(5376..>5966)
                     /locus_tag="QF480_04605"
     CDS             complement(5376..>5966)
                     /locus_tag="QF480_04605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05872.1"
                     /translation="CMCPGGVIVPATAVADANIVNGMSKYLRSNKFANAACVATLNIG
                     NMLKRDVSALEALDWMEGIENSFFEFSKGYKAPTCSITDFINKKITNNDTNTSYPLGV
                     IEAPLWELLPSEVETAMREGLKDFIKKMKGFETGNIMGLESKTSSPIQVDRYKNGLCS
                     GFANLYVIGEGSGFAGGIISSAADGIKSALDLISQL"
BASE COUNT         1969 a          976 c          903 g         2118 t
ORIGIN      
        1 attaattcct gaagcacttt ttagtgaaga tcataaaaat ctttatcttg gatttaatca
       61 accattccag gaaaatagca gaattgtttt tgatcgattg aaaaataatc aggctgttaa
      121 catatattac ctgccaaact ttgttgtgga aaaagcaaaa gatttttggc cgaatgttaa
      181 tctattacat ttttcaacag caatgattga gagcttatca ataaatttta aaaataaagt
      241 agataaaaaa acgctttttg taaaccttcg cgatgattgc tttgatgttg tgtatttcaa
      301 agagaataaa ctacattttt ataactcttt tgattttcac actaaggaag attttattta
      361 tttcttacta atatcaatcg aacaattgat gctaaatccg gaagatgtta acttaattat
      421 ctctggaaat attaaagaaa cggatcagac atataagatg attcatcaat acattaaaaa
      481 ttatagtttt atttctagaa atgataacta cagttattct ttcgttctgg atgaattaaa
      541 atattataaa tattatattc tttttaatgc gttacaatgc gaataattag cggaaggtac
      601 aagcgtagag ttatctcacc tcctaatgac cttcctgtac gaccaaccac cgatatggct
      661 aaggaaagct tattcaatgt actaagtaat tatgttgatt ttagtgaaaa aacagtactc
      721 gatctctatg ccggcacagg aaatatttct tatgaatttg tttcacgtgg ttgtagctcg
      781 gtaactgctg tagataagga ttttggatgt acaaagttta ttattaaaac cgctcaacag
      841 cttgaaatga aggagctaaa cgtaacgaag cttgatgcat cccgatttat tgagactgcc
      901 aaaaataaat atgatattat atttgctgat cctccatata agctaactaa tattgatttc
      961 tcagggttat tgcattttta tgagcataga aaatatggca gggttaattt cagttttttc
     1021 caactagaag gtgaacaaaa aagactataa ctaactccct ttttgaaatt aagcaacaaa
     1081 ttttattgag attaattttt agaaatcaat aatagtaaag ataaataata aacaaaaaaa
     1141 ccgggttgcg aaatttcaat ctcacagccc ggctaaaaat gttcaagttt aattttactt
     1201 tttcttttca agcattaata tctcgttggc tactacctcg gtaatatagc gtgtagttcc
     1261 ttccttatca tcccatgagc gataagtaag ttttccagat aatgctatct cttgaccttt
     1321 tttgaggtac ttatcagcaa tattggctac gtttccccaa gcaactatgt tatgccactg
     1381 ggtttcttct acgcgctcac cttctttatc tttgtaataa gtagaggttg caagtgagaa
     1441 ttttactttg gttttgtttt caccaaatgt tgatgtttca ggatcaattc ctaagcgtcc
     1501 gatcagttgt actgaatttt ttaaagttgt cataatagta attttaatta gttaaaaaat
     1561 atgtttaatt attattttct taatgtatgc actacgttaa gttgggtaat ctgtagctgg
     1621 cttcaataat gtatgaacga aatctgaggc aaacatacag tgggggtttt acctaagccg
     1681 tataataagc atttacttac gtaattatac gtttataacc gggtaaaaac gaattaaatg
     1741 cagaaataga gatagataga aaaatattag tgagtcagtt attttaacaa ttttgtaaat
     1801 taatttgttg attgtaagat ttgtagaggc taatttctat ttcaggatgg agataatatt
     1861 attataaaaa gtgtaattgt catacctttg cattaatcaa tcttgttaat tttttactaa
     1921 accatactat cattatcaaa tattgaaaac cgtgatgacc ttatgagtaa taggataaat
     1981 tcaataacaa taatagttat catacttatc attactggat cgtattttaa tcttacttcg
     2041 ttatactatc tcatccctat tataattcta tacataattg ttaatattat gggctcaaca
     2101 agcataggcc tcaattatta ttttcattca tatagtaatg catcaacaac caagaaagac
     2161 attgccatta cttttgatga tggacctcac cctcatatca ccccaaaact tattgagtta
     2221 ctagattctc acaatgtaaa agctactttt ttttgcattg gtaaaaatgt aagagctcat
     2281 cctaatattg ttgtcgatat tatcgacaaa ggtcatcttg taggaaatca cagttatcgt
     2341 cactctaaat ttttcgactt gctatcgtca aaaaatatgc agaaagaaat ggttgaaaca
     2401 aatcaaatat tagaatccat aacgggaaaa tctcctaaat tattcagacc ccctttcggg
     2461 attacaaacc ctatgctgcg taaagccata agtagaacaa atatggtttc agtcggttgg
     2521 agtttgagat tatttgatac agttaaagat ccaaaaaatg ttattgctaa attggtgact
     2581 aatacaaaac ccggagatgt tgttcttttt catgatacaa ataagaatat tttagaaatt
     2641 gttgaagagt atttgttgtg gcttaaaaaa aatgattata aaattgtaag tttgacaagt
     2701 ttgctaaaca tcgaagccta tgaagattaa cctacagata atcattgttg tatttttaat
     2761 cgcgtggtcg tttatgttat gtggtcagga taaggaattc aagactgttg cgaatattga
     2821 taaactgaaa tcaaaacttg aaacccactc taacaatact aatactatcg aaagcgattt
     2881 tattcagaaa aaacatttat ggatgttaaa cgaagtcctg attagtgaag gcaagtttct
     2941 ttttaaaaag caaaacaatg ttaaatggca atatgtaacc ccaatcgagt acacaataat
     3001 cattcataat gggatattca ctataatcaa caatcacaag gttaaggagt ttaatattaa
     3061 ttccaatccc ctttttcacg aaataaacaa aatgattgtt acagctattc gcggtgattt
     3121 tattgataat cctgatttta gtgctgaatt ttttgagaat caagctaact atctggctaa
     3181 gttagtccca acaaatatta atgttagttc gatactggag aacattgaaa tttatttcaa
     3241 taagcagaat atgcaagttg ttaaagttgt ttttcatgag cccggtgacg attttacatc
     3301 cattactttt ctaaacaaaa agataaattc tgaattatca gatgatagat ttttaagcga
     3361 tactaaatga agaatttttg ccctatcatt aaactaaggc ttgctattgg attgttaatt
     3421 tcaatactgt ttattatttc ttcttgttcg atagcagggt ataaacctgt tgcaaattct
     3481 gaggaatacc aaattaataa actttacata tttgataacg atttcaaaaa agcactttac
     3541 aaaactaata tcaatattta cggcaacaac ctaaccggct taacattgat gaaaaaaact
     3601 gatagcgcaa tgcgagtggt ttcaatgtcg gaattaggga ttaagtactt tgattttgaa
     3661 tttccagatg atactcaaaa agaattcaaa gttcattatg taatggaacc tttaaataaa
     3721 gagtttgtta ttaataagat tagcaaggag tttacattta tgtttttctt acctgatatt
     3781 acgagatctc agattaaaat tttcagaaat gatagctcca atctgattat taagcacaaa
     3841 aatcttgtat acttttttga tcaatcgggt gccgttacta aaatatgttt gcaacgatgg
     3901 ccattacatc taaagtctat aattagttta tcggattata aacactcatt tccagaaaca
     3961 atttttatta ataaaggcaa gatttcgatt gatttagaac ttatagattg aaacaagtaa
     4021 ttaagctaga tttatcacca aactatgttc aacatttgat gcttaacctt ttatgccttt
     4081 gaacaaggca taccctaatt ttccttctaa tattgttttg taaaatattt tttcattttg
     4141 aaaaacttta attacccctt taattccata gattttgcaa atacggcagg cggttttcaa
     4201 tttctccgaa gtagtcatta cacttttgaa gctgttaact tttctgtctt tacgtatatt
     4261 ccaaaacatt tcaggtttag accaacgatc aaattcagaa atgatattag tagtccccgc
     4321 ttttttcaac attgcaatcc attcatcaaa ttcaagcggt gtagttccat atctttcaga
     4381 gatttcttct ttttcgttct ttggaatagt tttcttccac gttgactcgt gaatggcaat
     4441 agcaccacca ggttttacaa cacgaaccat ttcatccaat actttttgag aatcatcggg
     4501 tattcctact gcacactcat taattactgc atcaaacaaa ttagctccaa agggtaaatt
     4561 ttgtgaatcc ccctcaataa aattaacttg ttcggttaat ccattttctt ttgcggccat
     4621 tgttgcagtt ttaatcatat cgggagatat gtcaattccc gtaacattaa caccaaatgt
     4681 tttggcataa tataacgctt gcgtacctct accactagac acatccaata tcttcatccc
     4741 ggatttaagg ttgcaaattt ctgctgttcg ttgtgttaat tcaaatccac cagggtgtaa
     4801 aatttctatg ccacttattt cgatcgcatc ttcaaccgtt ggcttgtgta ttccaactcg
     4861 cttcattttt tgtctttcgt attgtttttg tcagtatcgg gttcttcaac attcttctct
     4921 gctcttatat tttcatactc ttgtagttgc tggcaagttg taaggtcctc tttaaaacgt
     4981 ttaaccatat tattaagttc atcacgtaag ccttttgttt gattataacg tttattaata
     5041 atttttgata aggctgtaat atcctgtctt acagtattaa actgagattg aaggttaaaa
     5101 tcatttctat tatcttctaa ttttaaaagt gatagcttat atgcacattc aatatttgct
     5161 aatgcaattg catccatctg catacgctct ttagaaacag tagtgttact atctttgctg
     5221 ccagatttca ttgttgaaca ggatgtaata cttagagcta atactactga gattattaaa
     5281 tatagattct tcattttata aaatatggac aaaagtaatt aatattgaga agttgtatct
     5341 gcattaagtt tggaacgctt ttagatttca aaatattata attgtgatat taaatctaag
     5401 gctgatttaa ttccatctgc tgcactcgat ataataccac cagcaaagcc acttccttca
     5461 ccaattacgt aaaggttggc aaaaccggaa caaagtccat ttttatagcg gtccacttgt
     5521 attggcgatg aagttttact ttccaacccc ataatatttc ctgtttcaaa acctttcatt
     5581 ttttttatga aatcctttag tccttcacgc atggcagttt caacttcgct tggtaatagt
     5641 tcccataaag gtgcttctat cacacctaaa ggataacttg tgttggtgtc attgttggtt
     5701 atttttttat taataaaatc cgtaatgctg caggttggag ctttatagcc ctttgaaaat
     5761 tcaaaaaaac tattttcaat tccttccatc caatcaagag cttcaagggc agacacatct
     5821 ctttttaaca tgttgccgat atttaaagtg gcaacacatg ctgcatttgc aaatttatta
     5881 ctacgcaaat atttactcat tccatttact atattggcat cggcaacagc agttgcagga
     5941 acaataactc caccagggca cataca
//
LOCUS       DASCQP010000272         5054 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001015669, whole genome shotgun sequence.
ACCESSION   DASCQP010000272 DASCQP010000000
VERSION     DASCQP010000272.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 5054)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5054)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5054
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001015669"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..699
                     /locus_tag="QF480_04610"
     CDS             <1..699
                     /locus_tag="QF480_04610"
                     /inference="COORDINATES: protein motif:HMM:NF013986.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BadF/BadG/BcrA/BcrD ATPase family protein"
                     /protein_id="HJN05873.1"
                     /translation="DSIDYLLEKNKLRYDDIAYIASTGEGEMVTKKTGHFYSMTTHAR
                     GATFLFPQANYVVDMGALYVKAIKIDNIGRVLDYKMTGQCASGSGQFIENISRYLGLA
                     ISEVGEISLKSKDPETPSGICAVLAETDVINMVSRGVSTPDIVKGIHISVANRVIKLL
                     TTLKANGTIVLTGGMAANIGMVETVKELAQKANIDPQKIVAHADSIYAGALGAAIWGG
                     FRYNKLKVKGVALA"
     gene            734..2857
                     /locus_tag="QF480_04615"
     CDS             734..2857
                     /locus_tag="QF480_04615"
                     /inference="COORDINATES: protein motif:HMM:NF024938.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase family protein"
                     /protein_id="HJN05874.1"
                     /translation="MKNEMDKGISMTHELDSLFKPKSIAIIGASTKELSIGNVIIKNL
                     LHYDFKGAIYPINPKAPEVRGLKAYPSIFDVPGDIDLAHVIIPSRFVPQIIEDCGKKG
                     IKSVIINSAGFSEMGEEGAALQQAFLDNAKEYGIRIFGPNCQGIINTDPDYKAYCDFT
                     FTFPKPGHISIVALSGGVGALIMQSLFDLEIGMRMYASNGNACDVSISEVVSYYGEDD
                     KSKAIILYTEGFSNPKEFLEVAKIVAKKKPILAMKAGRTEEGAKAAASHTGSLAGVDI
                     ATELIFEKIGAISFHNEEEMCQSAMAFATQPIPKGNKVGIITNTGGPAVIATDELVSA
                     GLEIPKLSEKALSRLKETMFPEAAIENPIDVVATAGGKEYRSAMDVLMDEDGIDCIYI
                     NFVTAPFVDCDEVVRQIVEVNNLKKKPIVCNFMTNMSMEKYQKTSKILKDGGVPCYSF
                     PTTAAKALGALYKYSLLKSRNIGVARTFPDVDKAIAASIIQEAKDTEREILSATQVYN
                     LLDAYGIPVADWQVVENASEAEKVAIEIGFPVVIKADAESLVHKSDMGGVAINLKNAN
                     EVQTVVKDMERKFDAKDLKFFVQKFLPGGRELITGVSAERDLGHLIMFGIGGIYVEVL
                     KDVVFKIAPVTELEANEMLTSINANKLLDGVRGEKGIYKKGVIEIIQRLSQLVTDFAL
                     IKEMDLNPIMAFEDSVFVVDARIKI"
     gene            2872..4074
                     /locus_tag="QF480_04620"
     CDS             2872..4074
                     /locus_tag="QF480_04620"
                     /inference="COORDINATES: protein motif:HMM:NF017828.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacyl-CoA dehydratase family protein"
                     /protein_id="HJN05875.1"
                     /translation="MYKIETTKLMKEIMGNYFRGMKDSKKKIAWCTSVGPAELLRSFD
                     FEVHFPENHGALLGATRTAGDFIPEAAKLGYSSEICSYLTADVGSYLKQQTPLLEHYD
                     LNGPPKPDLIVYNTNQCREVQDWFTYFAREFNCPVFGITSPRHVNEVSKEDIDDVASQ
                     FKAMIPICEQVSGNKFDIDKFKETIRLSKEATDLWKEVLWTASVTPSPISFFDATIHM
                     GPIVVLRGTQTAKNYYDVLLEELKGNMDKGIGFLEKEKCRIYWEGMPIWGKLRSLSNL
                     FLEQNAAVVASTYCNSWVFDDFDERNPFESSALAYTTIFINRSEEAKEAVLKKMIQDF
                     RLDGIIFHEAKTCFNNSNSRFGMPARLKEETGVETLVIEGDLCDLRFFSEEQSTIKIE
                     TFLEQISS"
     gene            4092..>5054
                     /locus_tag="QF480_04625"
     CDS             4092..>5054
                     /locus_tag="QF480_04625"
                     /EC_number="1.1.1.169"
                     /inference="COORDINATES: protein motif:HMM:TIGR00745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008677 - 2-dehydropantoate 2-reductase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HJN05876.1"
                     /translation="MKKEIFKVGIVGMGPVGMILAVHFKLAGCEVAICDIDKRKINLI
                     RKEGIELVGKINKNAYFKHIYSSIPELMEHKFDLLISSVKAYHVDAVLDQIEAADHQD
                     LHLLCAQNGIDIRMKYQSHFKDSKILRMIVNFAGNLNAPNVVNVTFFNPPNYIGSIDD
                     SNGGLAELVADILSSQDLETKNADSFKIAEEAWIKTILNAALSPLCGISAHTMKEAMA
                     NPDTLEIVEQIIMEAMEVAKVEDVIFEKNFAKLCIRYLKNAGNHFPSLAVDLLNKRET
                     EIDYMNGKIIEYGRKHYIKTPINLVFTNLVKAITHKNLIENHSKD"
BASE COUNT         1773 a          727 c         1035 g         1519 t
ORIGIN      
        1 gattcaattg attatcttct cgaaaaaaac aagcttcgtt atgacgacat tgcttatatc
       61 gcatctaccg gagagggtga aatggttact aaaaaaacag gacattttta tagcatgaca
      121 acccatgcac gaggagcaac gtttttgttc ccacaagcta attatgttgt tgatatggga
      181 gctctgtatg ttaaagcaat taaaattgat aacataggca gagtgctcga ttataaaatg
      241 acaggacaat gtgcaagtgg ctctgggcaa tttattgaaa atatatcaag atacttagga
      301 cttgcaatta gcgaagttgg cgagatctct ctaaaatcaa aagatcctga aaccccttca
      361 ggaatttgtg ctgtacttgc ggaaactgat gtcattaata tggtatcaag aggagtttca
      421 acacctgata ttgttaaagg aattcatatt tctgtggcaa acagggtcat taaactttta
      481 acaacattaa aggctaatgg tacaattgta ttaaccgggg gcatggcagc caatataggt
      541 atggttgaaa cggttaaaga attagcacaa aaagcaaata ttgatcccca aaaaatagta
      601 gctcatgctg attccatcta cgcaggtgct ttaggtgctg ctatttgggg aggattcaga
      661 tataataaat taaaagtaaa aggtgtagca cttgcgtaat tgatttaata ctaattatta
      721 agaaaaagca aaaatgaaaa acgaaatgga taagggtata tcaatgactc atgaattgga
      781 ctcacttttt aaacctaaat ctattgctat tattggagca tcaactaagg aactatctat
      841 tggaaatgtg atcattaaaa atctactcca ttatgatttc aaaggtgcta tttatcctat
      901 taatcctaaa gcacctgaag taagaggtct taaagcctat ccctcaattt ttgatgtacc
      961 tggagatatt gatctggcac atgtgattat cccaagtaga tttgtgcctc aaataataga
     1021 ggattgtggt aagaagggga ttaaatcagt tataataaac tctgcaggtt ttagtgaaat
     1081 gggtgaagaa ggagctgctc ttcaacaagc attccttgat aatgctaagg agtatggaat
     1141 aagaattttt gggccaaatt gtcagggaat cattaatacc gacccggatt ataaagcata
     1201 ttgtgatttt acatttacct ttccgaagcc tggtcatatc tcaattgtag ccttaagcgg
     1261 aggtgttggg gcattaatca tgcaaagtct ttttgattta gaaataggaa tgcgaatgta
     1321 tgcttccaat ggaaatgcat gtgatgtatc aatttcggaa gtagtaagtt attatggaga
     1381 agacgataaa tcgaaagcaa taattttata taccgaaggt ttttcaaacc cgaaggaatt
     1441 cttggaagtg gcaaaaatag ttgcaaagaa gaagccaata cttgccatga aagctggcag
     1501 gactgaggaa ggggcaaaag cagcagcgtc tcatactggc tcacttgcag gagttgatat
     1561 tgcaacagag ctcatttttg aaaaaatagg agccatatca tttcataatg aagaagagat
     1621 gtgtcaatca gcaatggctt tcgctaccca acctattccg aagggaaata aagttggtat
     1681 tattaccaat acagggggtc ctgcggtaat tgctactgat gagctagtaa gtgccggact
     1741 ggaaatccca aagctttctg aaaaagcact tagcagattg aaagaaacta tgttcccaga
     1801 agcagctatt gaaaatccta ttgatgtggt tgcaactgca ggtggaaagg aatacagaag
     1861 cgcaatggat gtactaatgg atgaagatgg cattgactgt atatatataa attttgttac
     1921 tgctcctttt gttgattgtg atgaggtagt gaggcaaatt gttgaagtca acaatttgaa
     1981 aaagaaacct attgtatgta acttcatgac caatatgagt atggaaaagt atcaaaaaac
     2041 ttctaaaata ctaaaggacg gtggagttcc ttgttatagt tttccaacta cagccgcaaa
     2101 agctcttggt gcactatata agtatagttt actgaaatct cgaaatattg gtgtagctcg
     2161 tacctttcct gatgttgata aagctatagc agcaagtatt attcaggaag ccaaagatac
     2221 tgaacgagaa attctatcag ccacacaagt atataatttg ctggatgctt atggaatccc
     2281 agttgctgat tggcaggtag ttgagaatgc aagtgaagca gaaaaagtag ctatagaaat
     2341 tggatttcct gttgtaatta aggcagatgc agaatcttta gtgcataaaa gtgatatggg
     2401 aggggtagcc ataaatctta aaaatgctaa tgaagtacaa acagtagtaa aggacatgga
     2461 aaggaaattt gatgctaaag atttaaaatt cttcgtgcag aaatttcttc caggtggaag
     2521 agaacttata acaggtgtta gcgctgaacg tgatttggga catctaatta tgtttggaat
     2581 tggaggcatc tatgtggaag tacttaaaga tgttgtattc aaaatagcac ctgtaacaga
     2641 gcttgaagca aatgaaatgc ttacatctat caatgctaat aaattgttag atggagtgag
     2701 gggagaaaaa gggatataca aaaaaggtgt tattgaaata atacaacgtt tgtcacaatt
     2761 agttacagat tttgccttaa ttaaagaaat ggacttaaat cccataatgg catttgaaga
     2821 cagtgtattt gttgttgatg ctagaatcaa aatttaatga aataatcaga catgtataaa
     2881 attgagacaa caaaattaat gaaggaaata atgggaaatt attttcgtgg gatgaaggac
     2941 agtaagaaaa aaattgcatg gtgtacaagt gtaggtcctg cggaattatt acgttctttt
     3001 gatttcgaag ttcattttcc agaaaatcat ggtgccttat tgggagctac ccgtacagca
     3061 ggggatttca tccctgaagc tgcaaagctt ggatattcaa gtgaaatttg ttcctattta
     3121 acagctgatg ttggatctta tctgaaacaa cagacaccgc ttttagaaca ttatgacctg
     3181 aatggaccac ctaaaccgga tttgatcgtt tataatacaa atcaatgtag agaagttcaa
     3241 gactggttta catatttcgc aagagagttt aattgtccgg tatttggaat tacatcccct
     3301 cgacatgtta acgaagtatc gaaggaagat attgatgatg ttgcatctca gtttaaagct
     3361 atgattccta tttgtgaaca agttagtggg aacaagtttg atattgacaa atttaaagaa
     3421 accataagat taagtaaaga agctactgat ctttggaaag aagtattatg gactgcaagt
     3481 gtaacacctt cccctattag tttttttgat gctactattc atatgggacc aattgtcgtt
     3541 ttaagaggca ctcaaactgc taaaaactat tatgatgtac ttttagaaga attaaaagga
     3601 aatatggata aaggtattgg gttcttagaa aaggaaaaat gtcgtattta ttgggaagga
     3661 atgcctatat ggggaaaact taggtcctta tcgaatctat ttttagaaca gaatgccgca
     3721 gttgtggcct ctacatattg taatagttgg gtttttgacg atttcgatga aagaaatccc
     3781 ttcgaatctt cagcacttgc atatactaca atttttataa accgaagtga agaagcaaaa
     3841 gaagcagtac ttaaaaaaat gattcaggat tttaggctag atggtataat ttttcacgaa
     3901 gctaaaacat gtttcaataa ttctaattca agatttggaa tgcctgctag acttaaagaa
     3961 gaaacaggag tagaaactct tgttattgaa ggtgatttat gcgatttaag attcttttca
     4021 gaagaacaat caacaattaa aattgaaacc ttcttggaac agatatcctc ataaaaccaa
     4081 aataaataac tatgaaaaaa gaaattttta aagtaggaat agttgggatg ggccctgtag
     4141 gtatgatttt ggctgttcat tttaaacttg ccggatgtga agttgctatt tgtgatatag
     4201 ataaaagaaa aataaattta attagaaaag aaggaattga acttgttggg aaaataaaca
     4261 aaaatgccta tttcaaacat atatattcat caatacccga attaatggaa cataagtttg
     4321 atttgttgat tagttcggtt aaagcttatc atgttgatgc ggtactagat caaattgagg
     4381 cagctgacca tcaagaccta caccttcttt gtgctcaaaa tggtatcgat attaggatga
     4441 aatatcaaag tcattttaag gattccaaaa ttttaaggat gattgttaat ttcgctggta
     4501 accttaatgc tccaaatgtt gttaatgtta cattttttaa tcccccaaat tatattggtt
     4561 ctatcgacga tagtaatggt ggtttggcag agcttgtagc tgatatatta tcgtcccagg
     4621 atcttgaaac aaaaaatgct gattcattta aaattgctga agaagcttgg attaaaacta
     4681 tattgaatgc ggctttaagt cctttatgtg gaatatcggc ccacactatg aaagaagcga
     4741 tggcaaatcc tgacacactt gaaatagttg aacaaatcat tatggaggcc atggaagtag
     4801 ctaaagtaga agatgttata tttgaaaaga attttgcaaa gctttgtatt agatatctga
     4861 aaaatgccgg taatcacttc ccttctttag cggtcgacct tttgaataaa cgagaaaccg
     4921 aaatagatta catgaatgga aaaattattg agtatggaag aaaacactat ataaaaactc
     4981 ccataaattt agttttcacc aatttagtaa aagctattac tcataagaat ttaatagaga
     5041 accattcaaa agat
//
LOCUS       DASCQP010000273         4250 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001020020, whole genome shotgun sequence.
ACCESSION   DASCQP010000273 DASCQP010000000
VERSION     DASCQP010000273.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4250)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4250)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4250
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001020020"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..392
                     /locus_tag="QF480_04630"
     CDS             <1..392
                     /locus_tag="QF480_04630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018337850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="penicillin-binding protein"
                     /protein_id="HJN05877.1"
                     /translation="LEGVVESGTGIRLRYKYGFNHPIAGKTGTTQNQSDGWFMGITPD
                     LTSGVWVGAEDRSVHFRTLTLGQGANMALPIWALYMKKIYADPSLGISMGEFDKPLRD
                     VMIEFDCEKYDRERQNGMLDQEEEDEF"
     gene            668..3577
                     /locus_tag="QF480_04635"
     CDS             668..3577
                     /locus_tag="QF480_04635"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN05878.1"
                     /translation="MKKPIRSLLKVLAFGSIMLLTFSTFGQTVVDNPNLDQVPQWYLD
                     QSQNMRQQISQIVTIDDYDNTYIGIDLAEGHISSNPLMPAEFFCAFNINKPHYTMDGL
                     NWVNSSPSWGGSMRGDPVTAYDSLGNLYYENMYGSSIQGCKVVKSTDNGQTWGPSVIA
                     INGNDKNWIACDQTAGPYANYVYTTMTNSGSGKFMRSTDHGETWENTYNASTQSLPGM
                     MVCVGAYQNIQGGAVTIVTNRGNAFASVYTFYRSLDGGATFTLMSAQSFAGYVGSAVN
                     GRNAVQNMRTRPYPFITADNSFGTYRGRLHLVYASNDPPGNGNKPDIWSRFSDDGGTT
                     WSDALRVNTGTSPTESNQWHPATWCDKETGRLYVQWMDTRDTPTNDSALIYATYSDDG
                     GQSFQVNQQVSNEKMKINCNTCGGGGTPRYEGDYNGIVSNSEVSMLTWSDFRWGKFSS
                     FIGYFPDFAMRAYPTTKMIYMSDTIWAVIPGVKLYDNEAIFSATIEDPSSGSFTLEFP
                     NGNSLNAFPDSIPIVVTVDQVPVGEYVMEITAEGPNGTPVHYREAIVDVISDPVAEFT
                     ANETTICAGSTIDFTDESVSPQSWLWTFEGGDPGTSVEQNPTGITYANTGTFNVSLEV
                     TNPVGSDLIIKEDFITVNTIPESPTGASLSVCKNLLIPPLEVAGENILWYNNPALTEV
                     IFEGNVFPTGNTLPGVYRYYVTQTIDNCESEAIEISLEIYDTPAVSFAPLDSVCLNTE
                     VFKLENGQPLGGSYFGPGIFDDVLFDAPLAGIGTHILGYRYADENLCTDTAYQNITVN
                     DIPQVNIGNDTSICGNRDITLNATTPNAASYLWTPGDFTTPSITVDSVGIGYNSQEFS
                     VIVTDENTCSGIDAITVTFINCTGIEDIVGLENVSLYPNPNYGTFNFRITSSKSINID
                     LKVYNALGVIYLEQNKIVINGEYSSRIDLQDIKPGVYFITLQNDEGIFVKKFLVK"
     gene            3790..>4250
                     /locus_tag="QF480_04640"
     CDS             3790..>4250
                     /locus_tag="QF480_04640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05879.1"
                     /translation="MKKPKHSAFKALVFMLIGLIACPVYGQVFDDDPNLDQVPQWYLD
                     SIQKWPKMASQVITIDNYDNFYLGTDFAEGHISVNPLAPTEFFTAFNTDGSHYTMDGL
                     DWDNSNPNWGGAMRGDPVTAYDSIGNLYYENMYGSSIQGCKVVKSTDNGQT"
BASE COUNT         1380 a          697 c          836 g         1337 t
ORIGIN      
        1 tgttagaagg tgttgtggaa agtggtactg gtattagact cagatataag tacggattta
       61 accaccctat tgccggaaaa acaggaacaa ctcaaaatca atctgatgga tggtttatgg
      121 gaatcacacc tgatcttact tcaggagtat gggtaggtgc tgaagatcgt agtgtgcatt
      181 tcagaaccct taccttaggg caaggagcta atatggcatt gccaatttgg gccctttata
      241 tgaaaaagat ctacgcagat ccctcattgg gtattagcat gggtgaattc gacaaacctc
      301 taagagatgt aatgattgaa tttgattgtg agaaatatga tcgcgaacgt caaaatggaa
      361 tgctagacca agaagaagaa gacgaatttt aagttgaaaa acatccatta ataaatactg
      421 ttctgaaatg attacaagaa tagtagtgca actctttagt ttaaaagtgc attaaatcaa
      481 tccgaattgt tatctaattc agtctacttt ataaaaaagt tatctttgga ggctatattt
      541 tttatacgtt tattctttaa tgcattctaa ttgatctaac atttgtcata acccttatgg
      601 atatttctaa aaagtatcaa taatacttta ataataaaaa tcaatagtta caattaaata
      661 ttttaatatg aaaaaaccta tacgctctct tttaaaagta ttagcatttg gttcaataat
      721 gttattgact ttctccacat ttggacaaac agttgtggac aatcctaatt tagatcaagt
      781 tccgcaatgg tatttggatc aatcacaaaa tatgcggcaa cagatttcac aaattgtgac
      841 aatagatgat tatgataata cttatatagg tattgattta gcagaaggtc atattagctc
      901 gaacccgctt atgccagcag aattcttctg cgcgtttaat attaataaac ctcactatac
      961 aatggatgga ttaaactggg ttaatagcag tccttcatgg ggaggttcaa tgagaggtga
     1021 tcctgtgact gcatacgaca gtttagggaa cctttattat gaaaatatgt acggatcaag
     1081 tatacaaggt tgtaaggtag taaaatcaac agataatgga caaacctggg gaccttcagt
     1141 tattgcaatt aacgggaatg ataaaaattg gattgcctgt gaccaaaccg ctggaccgta
     1201 tgctaattat gtatacacca caatgacgaa tagtggttcg ggtaaattta tgagaagtac
     1261 tgaccatgga gaaacatggg agaatactta taatgcatca actcaatcct tacctggaat
     1321 gatggtttgt gttggagcct atcagaacat tcagggtggt gctgtaacta ttgttacaaa
     1381 taggggcaat gcatttgcct cagtttatac attttacaga tcccttgatg gtggggcaac
     1441 ttttacactc atgtcagctc aaagttttgc agggtatgtt ggcagtgctg ttaatggaag
     1501 aaatgctgtt caaaacatgc gtacaagacc ttatccgttt attacagcag ataatagttt
     1561 tggtacttat agaggacgtc ttcatttagt ttatgcatca aatgatccac cgggtaacgg
     1621 aaataaacct gatatatgga gtagattttc tgatgatggt ggtactacct ggtcagatgc
     1681 actaagagtt aacacaggca cctctcctac tgaaagcaat cagtggcatc ctgctacgtg
     1741 gtgtgataaa gaaactggta gattatatgt gcagtggatg gataccaggg ataccccaac
     1801 aaatgacagt gcgttgatct atgctaccta ttctgacgat ggtggacaaa gttttcaggt
     1861 taaccaacaa gtctcaaacg aaaaaatgaa aatcaattgt aatacatgtg gtggcggggg
     1921 tactcctaga tatgaaggtg actacaatgg tattgtgtca aactccgaag tttcaatgtt
     1981 aacctggagc gactttcggt ggggtaaatt ttccagcttt ataggttatt tccctgattt
     2041 tgcgatgaga gcttacccaa caacaaagat gatttatatg agtgacacaa tttgggcagt
     2101 aatccccgga gtaaaacttt atgataatga ggctattttt tctgcaacaa tcgaagatcc
     2161 ctcttcaggt tcatttacat tagagtttcc aaatggaaat tccctaaacg catttcctga
     2221 ttccatacca attgtcgtaa ctgttgacca ggttcctgtt ggagaatatg taatggaaat
     2281 aacagcagag gggccaaacg gcactcctgt ccattatcgt gaagcaatag ttgacgttat
     2341 ttctgatcca gtagctgaat ttaccgcaaa tgaaacaact atttgcgctg gttcaactat
     2401 tgattttaca gatgaatcag ttagtccaca aagttggtta tggacatttg aaggtggtga
     2461 tcctggaact tctgtcgagc aaaatcctac tggaattact tatgcaaata ctgggacttt
     2521 caatgttagt cttgaagtta caaaccctgt tggtagtgat ctaattatta aggaagactt
     2581 tatcactgtt aatacaatac cagaatctcc cacaggagca agtttatcag tttgtaaaaa
     2641 tttattgatc ccacctcttg aggtagcagg tgagaatatc ctctggtata ataatcccgc
     2701 tttaactgaa gtaattttcg aaggcaatgt atttcccaca ggaaatactc ttccaggcgt
     2761 gtaccgttat tacgtaacac aaacaattga caattgtgag agtgaagcta ttgaaatttc
     2821 cttagaaatt tatgatactc ctgcagtaag ttttgcgcca ttagattctg tctgcttaaa
     2881 taccgaagtg tttaaattag aaaatggaca accgttagga ggttcatatt tcggacccgg
     2941 gatttttgat gatgtattat ttgatgcacc attagctggt attggaactc atattcttgg
     3001 ctacagatat gcagatgaaa atctatgtac tgatacggca tatcaaaaca taacggtaaa
     3061 tgacattcct caagtgaata ttggaaatga tacatcaatt tgtggaaata gagatattac
     3121 tttaaatgcc acaacaccaa atgctgcttc atatttgtgg actcctggtg atttcactac
     3181 accaagtatt accgttgatt cagttggaat aggttataat tcacaggaat ttagcgtaat
     3241 tgttactgat gaaaatacct gctctggcat tgatgctatc acagtaacat ttattaattg
     3301 tactggtatt gaggatattg ttggtcttga aaatgtaagt ctctatccaa atccaaatta
     3361 tggaaccttc aattttagaa ttacttcttc taaatcaatt aatatcgacc ttaaggtata
     3421 caatgccctg ggtgttatat atttagagca aaataaaatt gtaattaatg gggagtattc
     3481 ctctagaatt gatctacaag acatcaaacc gggtgtatat ttcattactc tgcagaatga
     3541 tgaaggaata tttgtcaaga agtttttggt taaataaact agacaggttt ttactaattt
     3601 tgttttaacg gacataatca aaaagaagaa ataagttatc tttgagaact tttagttttt
     3661 cttattaggt tgtattaaat tcaagtattg ttagagcact aatgtgtaac tttacgtagc
     3721 ctaacataaa tagtaatcta aaaggatttc agtcacaatt ttaactaatt ataactaatt
     3781 atttaagaga tgaaaaaacc aaaacactct gcttttaaag cattagtatt tatgttgatc
     3841 ggattaatag catgtcctgt ttacggacaa gtttttgatg acgatccaaa cttagatcag
     3901 gtacctcaat ggtatttgga ttcaatacaa aaatggccaa agatggcctc acaagttatt
     3961 acaatagata actatgataa tttttattta ggaacggatt ttgcagaagg tcacattagt
     4021 gtcaatcccc tcgctcctac agaatttttc accgcattca acaccgatgg ttctcattat
     4081 acaatggacg gtctcgattg ggataatagt aacccgaatt ggggtggtgc tatgcgaggt
     4141 gaccctgtaa ctgcatacga tagcataggg aatctttatt atgagaacat gtatggctcc
     4201 agtatacaag gctgcaaggt ggtaaaatca actgataatg gtcaaacatg
//
LOCUS       DASCQP010000274         2083 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001024961, whole genome shotgun sequence.
ACCESSION   DASCQP010000274 DASCQP010000000
VERSION     DASCQP010000274.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2083)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2083)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2083
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001024961"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(125..427)
                     /locus_tag="QF480_04645"
     CDS             complement(125..427)
                     /locus_tag="QF480_04645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05880.1"
                     /translation="MKKINLRVIFIGILTLLSGSIFAQSVSISGEVRPRFEYRHGYKT
                     LIPDGKDAASFISQRTRLNAFYGNSTFKFGLVVQNVAVWGDVSQLNLSSKNGTAIH"
     gene            complement(671..>2083)
                     /locus_tag="QF480_04650"
     CDS             complement(671..>2083)
                     /locus_tag="QF480_04650"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008862241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurQ"
                     /protein_id="HJN05881.1"
                     /translation="VIQTIVGTKIIYIDLSQSPFELGGSSLAQSLNKIGTKTPDVTNA
                     KYFGSAFNAIQSLIAEEKILAGHDISAGGMITTLLEMNFSNCDHGMRINLSEIKENDI
                     IKLLFGENPGIIIQVDDHDHVYSCLKNQNINYHLIGEVISERKIDIVHNSNNYVFDID
                     KLRKFWFETSYNMDKKQSTQEAALSRFNNFSKQDLHFNFNRDFTGTAKDYGINLSRRN
                     PSGIKAAIIREKGVNGDREMAYAMHLAGFDVKDVHMTDLISGSENLTDVNFIVFVGGF
                     SNSDVLGSAKGWAGAFLYNKQAKEALDNFYAREDALSLGVCNGCQLMLELGLIYPEHP
                     EKPKMLRNQSGKFESGFVNVNIKENNSVMLKSLSGSRLGVWVAHGEGKFSFPYFRDSY
                     HMAMTFSYDLYPGNPNGSDWGTAAIYSNDGRHLAMMPHLERAFLPWQWPIYPKNHKDN
                     EVTPWIEAMVNARKWVENNT"
BASE COUNT          637 a          419 c          324 g          703 t
ORIGIN      
        1 catcatggct gcgagcctgt tgtgcccacc caacgttacc aaaaattcga tgatcatcgt
       61 atgcgatttc ctgcctacca actttaacag ataatttctt gctaaacata acttggcccc
      121 aagcctaatg aattgctgta ccattttttg agcttaagtt aagctgtgat acatcacccc
      181 atacagcgac attttgaaca actaatccga acttaaatgt actatttcca taaaaagcgt
      241 taagtcttgt acgttgtgaa ataaaacttg cggcatcctt tccgtctggt attaatgttt
      301 tgtatccatg cctatactca aacctaggcc tcacttcacc agaaatgctc acactctgag
      361 caaatatact tcctgataga agtgttaaaa ttccaataaa aattactcga aggttaatct
      421 ttttcatact cttaaattta gtttttaata atttcagtaa tgtaaatctg aaatacaaaa
      481 atagtttata tataatgtca tcaattgtat aattagtaat aatgtcaaat ttatactgtt
      541 tctaaattat ggttttagta atcgtaagat tattaggtat ttaataattg tcttttacaa
      601 ttattaaatt attattcgca cttccaatca agctgtttat ctccaactta aagtttggga
      661 gttaggatta ctaagtatta ttctcaaccc actttcgtgc attaaccata gcttcaatcc
      721 atggtgttac ctcattatct ttatgatttt taggataaat cggccattgc caaggcaaaa
      781 atgcacgttc aagatgtggc atcattgcca gatgccgacc atcgttggaa tatatcgctg
      841 cagtacccca atcagagcca tttggatttc cggggtatag gtcatagcta aaagtcatag
      901 ccatgtggta actatcccga aaatagggaa agctgaattt accttctccg tgtgctaccc
      961 aaacaccaag cctgctgcca gaaagggatt tgagcattac cgagttattt tcttttatat
     1021 taacgttaac aaatcccgat tcaaactttc ctgattgatt gcgaagcatt tttggctttt
     1081 ctggatgttc cggataaata agtccgagtt ctaacatcaa ctgacaaccg ttacaaactc
     1141 ctaagcttag cgcatcctca cgcgcataga aattatctaa tgcttcttta gcttgtttgt
     1201 tatataaaaa tgcccccgcc cagccttttg ctgagccaag tacatcagag ttggaaaatc
     1261 ccccgacaaa aacaatgaag ttaacatcag ttaagttttc actgccggaa atcagatcag
     1321 tcatatgaac atcctttaca tcaaagccag cgagatgcat tgcatatgcc atctcacgat
     1381 caccatttac acctttctca cgaataatgg ctgcttttat tcctgacgga tttcttctac
     1441 tcagattaat tccatagtct ttagccgtac ccgtaaaatc tctgttaaaa ttaaaatgca
     1501 gatcttgttt gctaaagtta ttgaatctgg atagtgctgc ctcctgtgta ctttgttttt
     1561 tatccatatt gtaggatgtc tcaaaccaga acttcctcaa cttatcaata tcgaaaacat
     1621 agttgttaga attgtgtaca atatcgattt ttctttctga aataacttca ccaataaggt
     1681 gataattaat attttggttt tttagacatg aataaacgtg atcgtggtca tctacctgta
     1741 ttataatgcc tggattttca ccaaacaaca atttgataat atcattttcc ttaatttcag
     1801 ataaattaat tctcatccca tgatcacaat tcgaaaaatt catttcgagt aaggtggtta
     1861 tcatcccacc ggctgaaata tcatgaccgg ctaatatctt ttcttcagct attaaagatt
     1921 ggatagcgtt aaatgctgag ccaaaatatt ttgcattagt gacatctgga gtcttagttc
     1981 caattttgtt taatgattga gctaagctgc tccctcctaa ttcgaaagga gattgtgata
     2041 ggtcaatata aataattttc gtaccgacga tagtttgtat tac
//
LOCUS       DASCQP010000275         6379 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001026187, whole genome shotgun sequence.
ACCESSION   DASCQP010000275 DASCQP010000000
VERSION     DASCQP010000275.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 6379)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6379)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6379
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001026187"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(148..2475)
                     /locus_tag="QF480_04655"
     CDS             complement(148..2475)
                     /locus_tag="QF480_04655"
                     /inference="COORDINATES: protein motif:HMM:NF012471.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004181 - metallocarboxypeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M14 family zinc carboxypeptidase"
                     /protein_id="HJN05882.1"
                     /translation="MKKVFLLIIIILCSNFIFGQVDNVVSAQEVLQNRGEVYFKFFLE
                     EDELTQNNISFLSNIISIDNIKENEITAYANTKGFSKFVDLNIDFEVLTPPSMLDSSI
                     LISASTTRNTEELDYYPSYDEYLNMMNQFATDYPNLCEVVNIGYSINGRELLFIHIND
                     SLGIAQNEPEFMYTSSIHGDELVGYFLMLRYIDHLLENYGVDPEITNLVNSIDIWINP
                     LANPDGTFAGGNNTVWGATRYNANNVDMNRNYADPEDGPHPDGNAYQIETIAFMDFAD
                     EHNLVMSANMHGGAEVVNYPWDTWPQLAADDDWWIYVSREYADTVHAYGPSGYLTDLN
                     NGITNGYVWYTISGGRQDYMNYFQNCREVTLELSQVKTPPESQLPGFWEYNYRSLVNY
                     MGQSLNGFSGKITNAMNGNPVAAKVFVENHDIDNSWVYSYQPLGYYHRLIKAGNYDVT
                     YSAFGYYDQTIVDVSITDDSNYELNVELIPYTSLLADFYASTTLTGAGNSIDFSDNSW
                     GSNIISWTWTFEGGTPSTSYDENPVGIIYENPGEFDVTLTIGNTNGDYDTEYKENYIN
                     IKESINMDNESITTCDLLFFDSGGENADYSDNEELTMTFLPDSPNSLVKMEFIEFNIE
                     NHFNCDYDYIEIFDGSDITAPRIGKWCGTNSPGLITADNEEGTLTVYFYSNSTITLAG
                     WKAIISCDSNVGIAQKKETDIKIYPNPARSEINIVLNGKIADIVLSDLQGRILYTAID
                     AQEIHHINIADFERGIYLISFKNNGEVVTRKIVFN"
     gene            complement(2536..3420)
                     /gene="dapA"
                     /locus_tag="QF480_04660"
     CDS             complement(2536..3420)
                     /gene="dapA"
                     /locus_tag="QF480_04660"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018464762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008840 - 4-hydroxy-tetrahydrodipicolinate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HJN05883.1"
                     /translation="MIPNFTGTGVAIVTPFLSSGKIDYNSLNKLLNCIVDNEIDFVVG
                     LGTTSEAVTLTSDEKKEVMKYVIEVVNNRVPIVMGIGGNNTAAVVNEIKNTNFKGVAG
                     ILSVAPYYNKPNQRGLYEHFKAIANSSPVPIILYNVPSRTSSNIAAETVLKLAIEFTN
                     IVAVKEASGDLAQVMEIIKNKPDGFSVLSGDDALTFPMISLGAEGVISVVANAFPSEF
                     STMVNQARNNDTEKAREIHYSLLEIIDLLFADGNPAGIKAALEIMGIMSNNLRLPMIP
                     VTYDVYLKLSQEIENYNK"
     gene            complement(3417..3962)
                     /locus_tag="QF480_04665"
     CDS             complement(3417..3962)
                     /locus_tag="QF480_04665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05884.1"
                     /translation="MRFSSKIKQSIAKFTLKLWPLSEHEPSGKPLNLVDNKILLLFDF
                     SKDNEIISLANKLSNIYIQLVASSTITICNLSNNCGQAENEEIVYFSFNDFDILGMPK
                     LSLNNWIINNEFDILISFVRKENVYCNNLISRIKSEFKAGLFNPNNVKLFDLTIKQKS
                     DNIINQLELFIQYLNKLNINK"
     gene            4173..4862
                     /locus_tag="QF480_04670"
     CDS             4173..4862
                     /locus_tag="QF480_04670"
                     /inference="COORDINATES: protein motif:HMM:NF024895.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HJN05885.1"
                     /translation="MKNRILIAIVIIASISWNISNAQVQGGFKMGVDFSNQVWTLDGD
                     KLNDTLNTKRLISPRIGFIIEVPINDYLFVQSGLFGCFKGFRFDGERLVSGKMAESKE
                     YELLLLVDLPINFGYKYDLGDAKLFAMAGPVISYATYATLLYKVDNEWDNEKQTIGTS
                     DTDTFKPWSLGVNIEGGVEVNRFQFSIFYTQGLSNLTAADDMKIKTNVFGLTAAIKFG
                     SVNGGGYRYGR"
     gene            4978..5736
                     /locus_tag="QF480_04675"
     CDS             4978..5736
                     /locus_tag="QF480_04675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013611028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HJN05886.1"
                     /translation="MVVTFLGTGTSQGVPVVACSCIVCKNAQKKDQRLRTSVLVEVDD
                     MVICIDAGPDFRQQMLREKVSKLDAIVITHSHRDHIAGLDDVRSYNYLSKKPMDIYAS
                     LEDQEEIKREFSYAFNNNYPGLPRFNIITINNGDFYIKNIKISPVRVLHLNIEVLGFR
                     IGDFAYITDTNYIPPSSLVKLDGCKVIVLNALRKEKHVSHYNLEEALNVINFLKPEYA
                     YLTHISHLMGFHKDLEKEIPPEVRVAYDGLKINL"
     gene            complement(5746..6153)
                     /locus_tag="QF480_04680"
     CDS             complement(5746..6153)
                     /locus_tag="QF480_04680"
                     /inference="COORDINATES: protein motif:HMM:NF012301.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HJN05887.1"
                     /translation="MTEWADYQFADKTILVVEDVDTSINFYHAALKKSHVNLLWAKDG
                     QEAVDLVNKYIDRIDLVLLDLYLPYISGFEVLKHLRNINQNVPVVVQTAYLFSGERKT
                     SFSMGANDFISKPVQLTDLLNIISKYLKPELTN"
BASE COUNT         2144 a         1093 c          995 g         2147 t
ORIGIN      
        1 attagtcgta tggatactat atattttgat gaagaagatc gttcaacaaa tctgtcacta
       61 gtaataattc tagttaccgt aataattttt gttgtgttgc gtgtgctgtt acataacgaa
      121 atatatatat ctgggtaagt tttgcagtta attaaatact atttttctgg ttacaacctc
      181 accattattt ttgaacgaaa ttaaatatat acctcgctca aaatcagcta tattaatatg
      241 atgtatttct tgggcatcaa tagccgtata taatattctt ccttgaagat cggataacac
      301 gatatctgca attttgccat taagcacaat atttatttca ctacgggcag gatttgggta
      361 gattttaata tctgtttctt tcttctgagc aattccaaca tttgaatcac aactaatgat
      421 tgctttccat ccggctaagg ttatcgtact atttgaataa aaataaacag tcagggttcc
      481 ttcttcattg tctgcagtaa ttaatccagg actattagtg ccacaccatt tccctattct
      541 tggtgcagta atatccgatc catcgaatat ctctatataa tcataatcac aattaaaatg
      601 gttttctata ttaaactcaa taaactccat ctttactaat gaattaggag agtcaggcaa
      661 aaaggtcatt gtaagttctt cattatctga ataatcagca ttttcaccgc ctgaatcaaa
      721 aaacaataga tcacaagttg taatactttc attatccata ttaattgact ccttaatatt
      781 tatataattt tccttatatt ctgtatcata atccccatta gtattaccaa tagttaaagt
      841 aacatcaaat tctccaggat tttcataaat aattccaaca ggattttcat cgtatgatgt
      901 tgatggcgtg ccaccttcaa aagtccatgt ccatgaaatt atattacttc cccacgaatt
      961 atcggaaaaa tcaatgctat tacctgcacc cgtaagggtt gtagatgcgt aaaaatctgc
     1021 aagtagtgat gtataaggaa taagctcaac atttaattca taatttgaat catcagtaat
     1081 cgaaacatca actattgttt gatcataata cccaaaagca gaatatgtta cgtcgtaatt
     1141 tccagctttt attagcctgt gataatagcc aagtggctgg taagaataca cccatgagtt
     1201 atcgatatca tggttctcaa caaatacttt agctgcaaca ggattaccat tcatagcgtt
     1261 tgtaatttta cctgaaaacc catttaatga ctgtcccata taatttacta atgaacgata
     1321 gttatactcc cagaagcccg gtaactgact ctctggcgga gttttaactt gagacagctc
     1381 aagtgtcact tcacggcaat tttgaaaata attcatgtaa tcctgtcgtc caccactaat
     1441 tgtgtaccat acatatccat ttgtaattcc attattgaga tcagttaaat aacctgatgg
     1501 accatatgca tgaacagtat cagcatattc acggctaaca taaatccacc aatcatcatc
     1561 tgctgcaagt tgtggccacg tatcccaagg gtaattaact acttcagctc ctccatgcat
     1621 attagctgac ataaccaaat tgtgttcatc tgcaaaatcc ataaaagcaa tagtctcaat
     1681 ttgatatgca ttcccatccg gatgagggcc atcttcagga tcagcataat ttctgttcat
     1741 atcaacattg tttgcattat accttgttgc tccccatact gtattattac cgccggcaaa
     1801 tgttccatcc gggttagcaa gggggttgat ccatatgtca atactgttaa caaggttggt
     1861 tatttcagga tctacaccat aattttcgag taaatgatca atatatctca gcattaaaaa
     1921 ataaccaacg agttcatcac catgtattga agaagtgtac ataaactcag gttcgttttg
     1981 agcgatgcct agactgtcgt taatatgtat aaataataat tctctgccat ttatactata
     2041 tccaatgttg acaacctcac acaggttagg atagtcagtt gcaaactggt tcatcatatt
     2101 aagatactca tcgtaggatg gataataatc cagttcttct gtattacggg ttgttgatgc
     2161 actaatcaaa attgaactat caagcatgga agggggtgta agtacctcaa aatcaatatt
     2221 cagatcaaca aacttgctga aacctttggt gttggcatag gcagtaatct cattttcttt
     2281 aatattgtca atggagataa tattagaaag aaatgatatg ttgttttgag ttagctcatc
     2341 ttcctcgagg aaaaatttaa aataaacctc tcccctgttt tgtaatactt cttgggcaga
     2401 aactacatta tcaacttgtc caaaaataaa attagagcat aagattatta taattaataa
     2461 aaatactttc ttcatcagtt aaatttctta gttactatga caacagtttt atcaaaatag
     2521 gtttctgaat atcctctatt tattataatt ttctatttcc tgagataatt ttaaatatac
     2581 atcataagtt acaggaatca taggtagtct taagttatta ctcattatcc ccatgatttc
     2641 aagtgcagct ttaattccag ccgggtttcc atctgcaaat agcaaatcaa taatttccaa
     2701 taaactataa tgaatttctc tagctttttc agtatcatta tttcgggctt gattaaccat
     2761 tgtggaaaat tcagatggaa atgcatttgc aacaacagaa ataacacctt cggcaccaag
     2821 agaaatcatt gggaaagtaa gagcatcatc acctgataga acagaaaatc catctggttt
     2881 attcttaatt atttccataa cctgtgctaa atctcccgat gcttccttaa ctgcaacaat
     2941 atttgtaaat tcaatggcca gtttaaggac tgtttcagca gcaatatttg aactagtcct
     3001 acttggtaca ttatatagta ttataggaac agggctgcta tttgcaatag ccttaaaatg
     3061 ctcatataaa cccctttgat ttggtttatt ataatatggt gcaaccgaaa gaattcctgc
     3121 tactccttta aaatttgtgt tttttatttc atttactact gccgcagtat tgtttccacc
     3181 aatgcccatt acaatcggaa ctctgttgtt aactacctca attacatatt tcattacttc
     3241 tttcttttca tcagaagtaa gtgttacggc ttcgctagtt gttcctaaac ctactacaaa
     3301 atcaatttcg ttgtcaacta tacaatttag tagtttattt agactgttat aatctatctt
     3361 tccgctagaa agaaacggtg ttacaattgc aaccccagta cctgtaaaat ttggtatcat
     3421 ttatttatgt ttagtttatt taagtattga ataaataact caagttgatt aattatatta
     3481 tcggattttt gctttattgt taaatcaaat agtttgacat tattgggatt aaataaacct
     3541 gctttaaatt ctgatttaat cctggagatc agattattac aataaacgtt ctctttcctc
     3601 acaaaactaa tcaaaatatc aaactcatta ttgataatcc agttattcaa actcaatttc
     3661 ggcataccca atatatcaaa atcgttaaaa ctaaaataca ctatttcttc attttcagct
     3721 tgcccacagt tattactcaa gttgcaaata gtaatagtag agcttgcaac aagctgtata
     3781 taaatgtttg aaagtttatt agccagcgat attatttcat tatctttgga aaaatcaaac
     3841 aataatagaa ttttattatc tactaaattt aatggttttc cagatggttc atgctctgat
     3901 aatggccaca atttaagtgt aaatttggca atcgattgtt ttattttact actaaagcgc
     3961 aaggaatttt ataattatca tgaatgcgta aaattaaaaa gaaattgcat gagcattaaa
     4021 taaaatttgt actcattata aataagatgt taactatcgg acatatggaa tgatacaaca
     4081 agaaaaagaa gaaatatgat aaattgggag ccatctttgt aatattagaa agctagtttt
     4141 gtatttttgt ttcgaactaa aataataaaa agatgaaaaa cagaattctt attgctattg
     4201 taataatagc ctcaatttca tggaatattt caaatgcaca agtacaaggt ggatttaaaa
     4261 tgggtgtgga tttctctaac caagtatgga ctttggatgg agataaacta aacgacacac
     4321 ttaataccaa acgactgatt tcacctcgta ttggatttat aattgaagta cccataaatg
     4381 attatctttt tgttcaatca ggattatttg gatgttttaa aggtttcaga tttgatggcg
     4441 aacgattagt tagtggaaaa atggcagaat caaaagaata tgaacttctc ttactcgttg
     4501 atctcccaat taattttggc tataaatatg atcttggaga tgcaaaacta tttgcaatgg
     4561 cagggcctgt aatatcctat gctacttatg ctacattgct atacaaagtg gataacgagt
     4621 gggataatga aaaacaaact attggtactt cagatactga cacttttaaa ccttggagct
     4681 taggggtaaa tatcgaagga ggcgtggaag taaacaggtt tcagttctca attttctata
     4741 cacagggatt atcaaaccta actgctgctg atgacatgaa aatcaaaaca aatgtcttcg
     4801 gtttaacagc tgccattaaa ttcggtagtg ttaatggtgg cggatataga tatggtcgtt
     4861 aattataaat gactttggcg cctggtataa tcatctatct tgtgtagtat tatattttct
     4921 atttcgtttg taatgcatta tcagctactt ttgtaataca aaacgtaagt acctaatatg
     4981 gttgtaacat tcttaggaac agggacatcg caaggagtac cggtagttgc ttgctcatgt
     5041 attgtttgta aaaacgctca aaaaaaagac caaaggctac gtacatctgt gctggtagaa
     5101 gttgatgata tggtgatatg catagatgct gggcctgatt ttcggcagca aatgctgcga
     5161 gaaaaggttt caaaactcga tgcaatagtt ataacccatt cgcatcgcga ccatatagca
     5221 ggattagacg atgtcagatc gtataactat ttatccaaaa aaccaatgga tatttatgcc
     5281 tcattggaag accaggaaga aattaaaaga gagttttcat acgcgttcaa taacaactac
     5341 cctgggttgc caagatttaa tattataaca attaacaatg gtgactttta tattaagaat
     5401 ataaaaatta gccccgtaag agtcttacat ttaaatattg aagtactcgg attcaggatt
     5461 ggagattttg cctatataac tgacacaaat tatatacccc cttcatcatt ggtcaaactt
     5521 gatggttgta aagtaatagt tctaaatgcc ttgcgtaaag agaaacatgt ttcacactac
     5581 aatctggaag aagcactaaa cgttatcaat tttctaaaac ctgaatatgc ttacttaacg
     5641 cacataagtc atttaatggg tttccacaaa gatttggaaa aagaaattcc tcccgaagtg
     5701 agagttgctt atgatggatt aaaaattaac ctttagaaat atctattaat tggttagttc
     5761 cggttttaga tactttgaaa tgatgttgag taaatctgtt aactgtactg gtttggagat
     5821 aaaatcattt gcccccattg aaaagctggt ctttctttca cctgaaaaca aatatgcagt
     5881 ttgtacaacc acaggaacat tttgattaat attccgtaga tgtttaagta cttcaaaacc
     5941 gctaatataa ggtagatata agtctaatag taccaagtca atccgatcaa tatacttgtt
     6001 cacgagatca actgcttctt gaccatcttt ggcccataat aaatttacat gtgacttttt
     6061 taaagcagca tggtaaaaat taatgctggt atcaacatct tcaacaacta gtatagtttt
     6121 atcagcaaac tggtaatcag cccattcagt catagtggtg gtaattaaat cagcaaatca
     6181 gtttatagcg tatttcaatt tctaaaacta ctacttattt ttcaaatagg attaaataat
     6241 aaaaaaagaa atccatctat taaataaagt atttttgcta cctagttaat ctaagttcat
     6301 acaaatacga acaaccatat gttatataga aggcatctaa gaataaaggt acttcagtca
     6361 ctttattcat ggcatactg
//
LOCUS       DASCQP010000276         1900 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001026284, whole genome shotgun sequence.
ACCESSION   DASCQP010000276 DASCQP010000000
VERSION     DASCQP010000276.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1900)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1900)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1900
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001026284"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..291)
                     /locus_tag="QF480_04685"
     CDS             complement(<1..291)
                     /locus_tag="QF480_04685"
                     /EC_number="2.7.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002558668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphofructokinase"
                     /protein_id="HJN05888.1"
                     /translation="MSKHKKIAILTAGGDCPGLNAAIRGVGKTAIVKYGMEVIGISSG
                     FLGLLDKEYFPLEENMLSGLLTEGGTILGTSREKPFKKSKRHNIDKPNRIKET"
     gene            complement(309..1721)
                     /locus_tag="QF480_04690"
     CDS             complement(309..1721)
                     /locus_tag="QF480_04690"
                     /inference="COORDINATES: protein motif:HMM:NF012593.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dicarboxylate/amino acid:cation symporter"
                     /protein_id="HJN05889.1"
                     /translation="MRKFALHWQILIALLLAIGYGLYFSTNYLITAESFEVLSKKNVS
                     GEVLTKIRTLEGNEYSTLSDFDDALEEHLGVVQYEKYKVLIVHSAYSNPAIEYVSWMG
                     DLFMRALRMLIIPLILSSLISGITNIGSGANLGRIGGKTLLYYLSTSMLAIFTGQILV
                     NIIKPGVGAQINFVQEVEGLVEKQRSFKEIIIEIVPDNVLTAMVENDMLSVIFFAILF
                     GFFIMKVGKKHSELLQHFFTSIFEVMMKITLFVIKFTPFGVFGLVAKTVADQDDFGGL
                     VNSMGLYMLTVIIALSIHGSITLPLIVKFIGKAKPLQHLKNMTTPLLTAFSTSSSAAT
                     LPLTINAVEEKSGVSNKISSFTLPLGATVNMDGTALYECIAAIFIAQAYGIDLTFLQQ
                     LIIVLTALLASIGAAAIPMAGLVMMTVILTAIGLPLEGVGLIIAVDRILDMFRTATNV
                     WSDSCGAVVIAKTEGEKLMV"
BASE COUNT          609 a          376 c          294 g          621 t
ORIGIN      
        1 ggtttccttt atacggtttg gtttgtcaat attatgacgc ttagatttct taaaaggctt
       61 ttcacgtgaa gtgccaagta tagttccccc ttcggtaagt aaacctgaca acatattctc
      121 ctcaagtggg aaatattcct tgtcgagcaa acctaaaaat ccagaggata tgcctataac
      181 ttccatacca tatttaacaa ttgctgtttt tccaactccg cgaatcgcgg catttaagcc
      241 agggcaatca ccgcctgctg taagtatggc tattttttta tgtttactca ttccctatac
      301 ttcatagatt aaaccatcaa tttctcacct tcagtttttg cgattaccac tgcaccacaa
      361 ctatcactcc atacattggt ggctgtgcga aacatatcca atatcctgtc aacagcaatt
      421 attaatccta ctccttctag tggtagcccg atagcagtta atattacagt catcataact
      481 agccctgcca ttggtatagc agctgcacca attgaagcca ataaagccgt tagcacaata
      541 attaattgtt gtaaaaatgt gaggtcaata ccatatgctt gtgcgataaa tatggcagca
      601 atacattcgt agagtgcggt tccgtccata tttacagttg ctccgagtgg tagagtaaaa
      661 ctactgatct tatttgatac acccgatttt tcctccacag catttattgt taaaggtaaa
      721 gttgccgctg acgaggaggt tgaaaaagca gtaagcaagg gggttgtcat atttttaaga
      781 tgttgcaatg gtttggcttt tccaataaac tttacaatta gcggtaaagt gattgaacca
      841 tggatggata gcgctatgat tacagtgagc atataaagcc ccatgctgtt tacaagtcca
      901 ccaaaatcat cctgatcagc tactgttttt gccaccaaac caaatactcc aaaaggtgta
      961 aatttgatta caaaaagtgt gatcttcatc attacttcaa aaatagatgt gaaaaaatgc
     1021 tgcaataatt cactgtgctt tttaccaact ttcataatga aaaatccaaa tagtatagca
     1081 aagaaaatga ctgacaacat atcattttca accattgctg ttaacacatt atcgggtaca
     1141 atctctatta ttatctcctt gaaggagcgt tgtttttcaa ccaagccttc tacttcctga
     1201 acaaaattaa tttgtgctcc tacaccaggt tttataatat tcaccaatat ctgtcctgtg
     1261 aaaattgcta acatacttgt actgagataa tagagtaacg ttttgcctcc aatacgtcct
     1321 aagtttgccc cagatccgat atttgtaatt cctgatatta atgaagataa aattaagggt
     1381 atgataagca ttcttaatgc ccgcataaaa agatcaccca tccagctaac gtattcaatg
     1441 gcagggtttg aatatgcaga atgaactatt agtaccttat atttttcata ttgaacaaca
     1501 cctagatgtt cttccaaagc atcatcaaaa tctgataatg ttgaatattc gttcccttca
     1561 agcgttctta tctttgttag tacctcacct gaaacatttt ttttacttag tacttcaaaa
     1621 gattccgcgg taattaaata attagtagag aaatataatc cataacctat ggctaataat
     1681 aatgctatta atatctgcca atgcagtgca aattttctca taaatctact atctttgtga
     1741 aacaatcaaa aatacaaaaa taatattacg caaattactg gtcgattttg attaaaataa
     1801 ctgatcttaa attaattgta cttgtagtaa tactttgatt gtctggtttc taaaatcgct
     1861 ctgtatgaaa aaactattac atcttattat tgccctatca
//
LOCUS       DASCQP010000277         3061 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001033363, whole genome shotgun sequence.
ACCESSION   DASCQP010000277 DASCQP010000000
VERSION     DASCQP010000277.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3061)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3061)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3061
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001033363"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..604
                     /locus_tag="QF480_04695"
     CDS             <1..604
                     /locus_tag="QF480_04695"
                     /inference="COORDINATES: protein motif:HMM:NF021497.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2219 family protein"
                     /protein_id="HJN05890.1"
                     /translation="LKKNISIKSSVNFGVIGPASMGGIVQSSIHNIEPIGWDNQIKNN
                     IVIDYSLKLEKGVVSTPHIELNVTAGGNFGTVFNKIASGLYFRAGSFVPVFKGLATNI
                     YRSSLRQPVKSPFQYWFFLSAETNLVLYDATLQGGIFNTNNPYTVQTSNINRLVANVS
                     VGFAVYYKKAGIELQNFYLSPEFKNGYDFRWGRIKFIYQF"
     gene            613..930
                     /locus_tag="QF480_04700"
     CDS             613..930
                     /locus_tag="QF480_04700"
                     /inference="COORDINATES: protein motif:HMM:NF016262.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF493 domain-containing protein"
                     /protein_id="HJN05891.1"
                     /translation="MTKKKVSDNGNLKNLNKAIKGVKIEFPVTFELKAVFDATATDDE
                     NKNELIELFDKLDISYSYKGNKKSSKGAYVSYNYKVTLQSKSKLEKLYSDLKNIPGLK
                     FAL"
     gene            927..1301
                     /gene="crcB"
                     /locus_tag="QF480_04705"
     CDS             927..1301
                     /gene="crcB"
                     /locus_tag="QF480_04705"
                     /inference="COORDINATES: protein motif:HMM:TIGR00494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:1903425 - fluoride transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:1903424 - fluoride transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HJN05892.1"
                     /translation="MIQKILAVALGGSIGAVLRYLIFLIYYRTHNQAFPWATLVINLI
                     GSFLIGLLWGMFDRFYVSPGIRLFLFVGILGSFTTFSTFAFDVFNLGRDGSIKYMILY
                     ISATNILGIALAFGGYYLSKVT"
     gene            1301..1870
                     /locus_tag="QF480_04710"
     CDS             1301..1870
                     /locus_tag="QF480_04710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05893.1"
                     /translation="MHEIEPYYNWRGNYVATNDPDSPFFKREYSEFTFTNSVYNHLIH
                     PQWDEFGSQTLFIKILMVNYEEHYCIIEMLGEWNDLLYNDIMFLYRNVIESLLENNIK
                     YFILIGENVLNFHGDTDDYYEEWFSNIDDGWIAGINFRDFVIQEFENCNIDYFIAFSG
                     KFNNVIWRKLTPDQFFEKVNSIITKRLSI"
     gene            1950..2219
                     /locus_tag="QF480_04715"
     CDS             1950..2219
                     /locus_tag="QF480_04715"
                     /inference="COORDINATES: protein motif:HMM:NF012911.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HJN05894.1"
                     /translation="MTKAAIIKVYGIVQGVGFRFYTNKKAIELGISGYVQNKPDGSVY
                     IEAEGDETDLMTFIDWCNIGPQWARVTKVETQIVPAINYIDFQIK"
     gene            2345..>3061
                     /locus_tag="QF480_04720"
     CDS             2345..>3061
                     /locus_tag="QF480_04720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005682732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HJN05895.1"
                     /translation="MEKVTQFIKENKERFMEELFEAIRIPSISSLSDHKDDMVRMAEF
                     YKKSLLAAGVDKAEVMSTAGNPVVYAEKIINESLPTVLVYAHYDVMPVDPIELWTSPP
                     FEPEIRDGKIYARGADDDKGQGFMHIKAFEALNKNNKLTTNVKFMIEGEEEIGSVSLG
                     AFCDEHKDMLKADIILVSDTGMIAEDIPSITTGLRGLAYWQVEVTGPSRDLHSGLFGG
                     AVANPINVLSKMIASMTDENG"
BASE COUNT         1031 a          450 c          590 g          990 t
ORIGIN      
        1 tctgaaaaaa aatatttcta taaaaagtag tgttaatttt ggagttatcg gacctgcttc
       61 aatgggaggg attgttcaat catcaataca taatattgaa cctattggtt gggataatca
      121 aattaagaat aacatagtaa tcgattattc attaaaactt gagaaaggag ttgtaagcac
      181 tccacacatt gagctcaatg taacagccgg aggtaatttt ggtactgttt tcaataaaat
      241 cgcaagtggt ttatatttta gagctggcag ttttgtccca gtttttaaag gtcttgcaac
      301 aaacatctat agaagttcac tcagacaacc tgtgaaaagt ccatttcaat attggttttt
      361 tttaagtgca gaaacaaatt tggtgttgta tgatgctaca ttacagggtg gaatatttaa
      421 cacaaataat ccttatactg tacaaaccag taatattaac agactcgtag ccaatgtaag
      481 tgttgggttt gcagtatatt ataagaaagc aggcattgaa cttcaaaatt tttatctttc
      541 acctgagttt aaaaatggat acgatttcag atggggccgg attaaattta tttatcaatt
      601 ttagtttatt acatgacaaa gaaaaaggta tcagataacg gtaacctaaa aaacttgaat
      661 aaggcaataa aaggtgttaa gatagaattt cctgttactt tcgaactaaa agcagttttt
      721 gatgctacag ctactgatga tgaaaacaaa aatgagctaa ttgaattatt tgataaatta
      781 gatattagtt actcgtacaa gggaaataaa aaaagcagta aaggagccta tgtcagctat
      841 aattacaaag ttactttgca aagcaaatcg aaattagaga agctgtattc tgatttaaaa
      901 aatatcccag gtttaaaatt tgctttatga ttcaaaagat attagctgtt gcgttaggtg
      961 gaagtattgg ggctgttttg cgatatctta tttttctaat ttattatagg actcacaacc
     1021 aagcattccc gtgggccact ctagtaataa atttaattgg ttcgtttttg attggactgc
     1081 tttggggaat gtttgacaga ttttacgttt cacccggaat tagacttttc ttgtttgttg
     1141 gaatacttgg cagcttcaca acattctcca cctttgcatt tgatgtattt aacctgggca
     1201 gagatggaag tattaaatac atgatacttt acatatctgc tacaaatatt ttagggattg
     1261 cacttgcttt tggtggctac tatttatcca aagtaacgta atgcatgaga ttgaaccata
     1321 ttacaactgg agaggtaact atgtagctac aaatgaccct gattcgcctt tcttcaaaag
     1381 agagtacagc gaatttacgt tcacaaattc tgtttacaac cacttgattc atcctcaatg
     1441 ggacgagttt gggtcccaaa cactctttat taaaatactg atggtgaatt atgaggagca
     1501 ttattgtatt atagagatgt taggagaatg gaacgacttg ctttataacg atattatgtt
     1561 tctttacagg aatgtaatag aatcattgct agagaataat atcaaatatt tcatccttat
     1621 tggtgaaaac gtattaaatt tccatggcga caccgatgat tattatgaag agtggtttag
     1681 caacattgat gatggttgga ttgctggtat taactttagg gattttgtaa tacaggaatt
     1741 tgaaaattgt aatattgatt attttattgc ttttagcggc aagtttaaca atgtaatatg
     1801 gcgcaaactt acacctgatc aattttttga aaaagttaat agtattatta ctaaacgact
     1861 tagtatatga tgattatgga atcagactaa aagaatctgg atatttctaa aaatgtcaaa
     1921 atgaccaatc aaccaatacc aattaaccaa tgaccaaagc agctatcata aaagtatacg
     1981 gaatcgtaca aggagttggt tttaggttct atacaaacaa aaaggccatt gaattgggaa
     2041 tatctgggta tgtacaaaac aagccagatg gctcagttta tatcgaagca gagggtgatg
     2101 aaacagatct gatgactttt atcgactggt gtaatattgg tcctcaatgg gcaagggtta
     2161 cgaaagttga aactcaaatt gtgccagcca tcaactatat tgattttcaa ataaaataaa
     2221 cctcgatata tattttcaac tcaacattta ttatgacctc aaccatcata tgaaataggt
     2281 tgtttaggag gtcatttttc agttaatctt tttaccttta cgcccttaat tttaaatatt
     2341 aaaaatggaa aaagtaacac aatttattaa agaaaataaa gaacgcttta tggaggaatt
     2401 gtttgaagca attcgtatcc cgtcaatttc ttcactatcg gaccacaaag atgatatggt
     2461 tcgtatggct gagttttata aaaaaagttt actggcagca ggagttgata aagctgaagt
     2521 aatgtcaact gctggaaatc cagttgttta tgctgagaaa ataattaatg agtcgttacc
     2581 aacagtgctt gtatatgcac attatgatgt tatgccagtt gaccctatag agctttggac
     2641 atcaccacct tttgaacctg aaattcgtga tggaaaaatt tatgctcgag gggctgatga
     2701 tgataaaggt cagggattta tgcatatcaa ggcctttgaa gctcttaata agaacaacaa
     2761 acttacaacc aatgttaagt ttatgatcga aggtgaggaa gaaattggtt ctgtgagtct
     2821 tggtgctttt tgcgatgaac ataaagacat gcttaaggca gatattattc ttgtttctga
     2881 cacgggaatg attgctgaag atattccatc aataaccaca ggactcaggg gcttagcata
     2941 ttggcaggtt gaagttacag gacctagcag ggaccttcac tcggggcttt ttggaggagc
     3001 tgtggcaaat ccaataaatg tactttcaaa aatgattgcc tcaatgactg atgagaacgg
     3061 t
//
LOCUS       DASCQP010000278         1937 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001041181, whole genome shotgun sequence.
ACCESSION   DASCQP010000278 DASCQP010000000
VERSION     DASCQP010000278.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1937)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1937)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1937
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001041181"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(341..>1937)
                     /locus_tag="QF480_04725"
     CDS             complement(341..>1937)
                     /locus_tag="QF480_04725"
                     /inference="COORDINATES: protein motif:HMM:NF016289.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HJN05896.1"
                     /translation="IEELPVDKTVWIIGFENKFAGEVIEQLHDYNSNFSTDSVKLENK
                     QLPKKGNNFVCTLFNAKDINKQTIFISINNDAAIAGLIRKLPHYGKYSYLAFNGDEPT
                     NIAKGQWPVLNSPLVKVFDPKAQKLSVVEKREALATLKPVFSENRMMSSIKYSASEVL
                     AGRGLGTPEIDQAAEYIAQKFQEAGLKPIGKSYYQKFTHNFQDKGVLDLTNVIGIIPG
                     TDAKFKNEPVIVSAHYDHLGEGWPDVHKGDEGKIHYGADDNASGVAIMIELAQTMAKT
                     VRPKRTIVFLACTAEEAGLIGSRYFVAHSKDYFKGEIFADVNLDTDGSLFDKKLLVLN
                     ANSAREWKFIFMGTDYTTGVKSEVIDKDLDASDQVAFIEKGIPAVQLFAGATANYHRP
                     SDSFEKIDGKGLVKVATVTKEVLVYLADREDPMNYTGTTPSAKKAPVKSKSNRRVSTG
                     SVPDFAYKGEGIKVASVISGSAGETAGLLANDIIVEFDNVKVTDLMQYSNLLKKYQPG
                     EIVNIKVLRGDKEKEISLKLGER"
BASE COUNT          560 a          411 c          298 g          668 t
ORIGIN      
        1 cgcagccaac ttttacaacc tgtacgaatg aaatttcttc tttttccatt ttatgttaac
       61 tttatgagac aatgtcacaa agttacccac aatattcatt ctcggttggt gtgctatttt
      121 tagctcatgg gtatttcatt tgtttaaaat ttattgaatt ttacaaatta ataatgccat
      181 actaatcagt aagtttaata aattgtatct ccgatagttc atataacctt tttcctttgt
      241 gtaccctttg tgaaatcctt ggtggtaact ttgtggttaa attttcacca ctaaggggca
      301 caaagtacat cactaagttg cacaaaacta attattatac ctacctctct cccaatttca
      361 aagaaatctc tttttcttta tcccctctaa gcactttaat attaactatt tcgccgggtt
      421 gatatttctt caatagatta gaatattgca ttaagtctgt aactttaaca ttatcaaact
      481 caacaataat atcgttggcc aacaaacctg cagtttcacc tgccgaaccg gatatcacac
      541 tagccacttt aattccttca cctttataag caaaatcagg aactgagcct gtggaaactc
      601 tacgatttga cttgcttttt actggtgctt tttttgcaga aggtgtagtt ccagtgtaat
      661 tcatagggtc ttctctatca gcaagatata caagaacttc tttagtaact gttgcaactt
      721 ttaccaaacc ttttccatct atcttttcaa atgaatctga cgggcggtgg taatttgctg
      781 tagcaccagc aaatagctga acagcaggaa ttcctttttc aataaacgca acctgatcgc
      841 tggcatcaag atccttatca atgacctccg attttacacc tgttgtgtaa tcagttccca
      901 taaagataaa cttccattcc ctagctgaat ttgcatttaa cacaagtagt tttttatcaa
      961 ataaactacc atcagtatca agattaacat cggcaaaaat ctcaccttta aaataatctt
     1021 tactgtgagc cacaaaatag cgagagccaa ttaatccagc ttcttcagcg gtacaagcta
     1081 gaaatacaat tgttcgcttt ggccttacag ttttagccat tgtctgtgca agttcaatca
     1141 taattgcaac tccacttgca ttatcgtcgg caccataatg aatttttcct tcatcaccct
     1201 tatgtacatc gggccatccc tcgccaagat ggtcgtaatg agctgaaaca atcacaggct
     1261 catttttgaa tttagcgtcc gttccgggta ttatcccgat aacatttgta agatccaata
     1321 cacctttatc ctgaaaatta tgggtaaact tctgatagta gctttttcca attggcttta
     1381 gtcctgcctc ttgaaacttt tgagcgatat attcggctgc ttgatcaatt tctggagttc
     1441 ctaagcctct tcctgctaac acttcagatg ccgaatattt aatgctcgac atcattctgt
     1501 tttcagaaaa aaccggcttt agagtagcta aagcttctcg cttttcaact acgcttagtt
     1561 tttgggcttt tggatcaaaa accttaacca aaggggaatt aagcactggc cattgcccct
     1621 tggctatatt agttggttcg tcgccgttaa atgccagata actgtattta ccataatgag
     1681 gtagctttct aatcaaacca gcaatggcag catcattatt gattgaaata aaaatagttt
     1741 gtttattgat gtcttttgca ttaaataaag tacatacaaa gttgttcccc tttttgggaa
     1801 gctgcttgtt ctctaacttt acagagtcgg tactgaagtt tgaattataa tcatgaagct
     1861 gctctattac ttctccggca aatttattct caaaaccaat tatccataca gttttgtcta
     1921 cgggaagttc ctcaatt
//
LOCUS       DASCQP010000279         2769 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001044324, whole genome shotgun sequence.
ACCESSION   DASCQP010000279 DASCQP010000000
VERSION     DASCQP010000279.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2769)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2769)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2769
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001044324"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1355
                     /locus_tag="QF480_04730"
     CDS             <1..1355
                     /locus_tag="QF480_04730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05897.1"
                     /translation="GTARSMAVGGAFGALGADFSTASTNPAGMGLFRTGEFIITPEVA
                     NRNVSSVYNGSLSESSRAIFDLSNLGYVIVKPLGKGSNWKFFQFGMGMNRLNNYNASL
                     YMQGENTINSKLDVYKELADGTLYSDLENDDPYELYPAWYLYLIDTLPGTTDLYSTAV
                     PFGGVLQQQQVISRGSKNEWLFSFSGNYNDFLYFGASIGLPYIRYFRESSYAEFDVKD
                     TIPNFNNWSVTENLTTTGWGINLKLGVIVTPFDWLRIGGAFHTPSYYWSMSDTWFYTT
                     TADFGSGFSDSYSSIVGNFDYHLSTPLRAIGSTAFLIGSHGFISGEYEYANYSTAKFT
                     ARNYNYSKDNQEIKSVFKSTHNFRAGTEWRFSNFSFRGGYALYGSPYNDKINDGKRTM
                     YSGGVGYKTRMYAVDFAYVYSVMNEDYYMYTTENISTNPVQNKFTTQSFVLSFKYFIN
                     "
     gene            complement(1427..1948)
                     /locus_tag="QF480_04735"
     CDS             complement(1427..1948)
                     /locus_tag="QF480_04735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004313451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HJN05898.1"
                     /translation="MATIKSVKGVLPKWGANCFIADNATLTGDVIIGNDCSIWFNSVV
                     RGDVHYIRIGNNVNIQDNVVIHCTYQKAPVNIGDNVSIAHSAIIHGCTIHNNVLVGMG
                     AILMDGVVVESNSMIAAGAVVSKNTIIKSGSLYAGVPARLIKTVDTELLEGEINRISN
                     NYNMYASWYDDDK"
     gene            complement(2050..>2769)
                     /locus_tag="QF480_04740"
     CDS             complement(2050..>2769)
                     /locus_tag="QF480_04740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019540196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HJN05899.1"
                     /translation="ERGSLAPRDIVARAIDNELKISGDEFVYLDTRKISKDEILNHFP
                     TIYAKCLSIGIDITKDMIPVVPAAHYSCGGIVTNKHGQTSISNLFASGEVANTGLHGA
                     NRLASNSLLESAVFSHRAAQKASSIISNINFEANIPDWDDKGTVLNEEMILVTQSKKE
                     LQSIMSNYVGIVRSNLRLKRALDRLNIIYRETEDLFDKSVVSEPICELRNMINVAYLI
                     IRLAMKRKESIGLHYNINYPG"
BASE COUNT          863 a          484 c          480 g          942 t
ORIGIN      
        1 agggaactgc acgaagtatg gctgtaggtg gagcttttgg tgctctagga gctgattttt
       61 ctactgcgag tacgaacccg gctggcatgg gcctttttag aacaggtgag tttataatta
      121 cacccgaagt agccaataga aatgtatctt ctgtgtataa tggcagctta tctgaaagtt
      181 ctagagctat atttgattta agtaatcttg ggtatgttat agtaaagcct ttaggtaaag
      241 gaagtaattg gaaatttttt cagtttggta tgggtatgaa cagacttaat aattataatg
      301 catcacttta tatgcagggg gaaaatacaa tcaattcaaa attggatgtt tataaagaac
      361 tggctgatgg gacgctatac agtgatctcg aaaatgacga tccatatgaa ctttatcctg
      421 catggtatct ttatctgatt gatactctac caggtacaac tgatctttat tctactgctg
      481 ttcctttcgg aggtgtatta caacagcaac aggtaatttc gcgtggatct aaaaatgaat
      541 ggttattctc gttttctgga aattataatg atttccttta ttttggagcg tcaatcggtt
      601 taccttacat aagatatttc agagaatcat catatgctga atttgatgtt aaggatacaa
      661 taccaaattt taataactgg agtgtaactg agaaccttac tacaaccggt tgggggatta
      721 atttaaaact tggggtaata gttacaccat ttgattggct gcgaattggt ggagcatttc
      781 acacaccatc atattattgg agtatgagtg atacatggtt ttacacaaca actgctgatt
      841 ttggatcagg attttctgat tcatattcat ccatcgtggg taatttcgac tatcatctat
      901 caacaccttt acgagccatt ggaagcacag ctttcttaat tggttcacat ggatttatct
      961 ccggtgaata tgaatatgct aattattcaa ctgcaaagtt tacagccagg aattataact
     1021 attctaagga taatcaagag attaaatctg ttttcaaatc aacacacaat tttagagctg
     1081 gaactgaatg gagattctct aactttagtt ttagaggcgg atatgctctc tacggcagcc
     1141 catataacga taaaattaat gatggcaaac gaacaatgta ttcaggtggt gtaggataca
     1201 aaacccgaat gtatgcagtt gattttgctt atgtgtactc ggtaatgaat gaagattatt
     1261 acatgtacac aaccgaaaat atttcaacaa atccggtgca aaacaagttt acaactcaat
     1321 cgtttgtatt atcatttaaa tactttataa actgattgtt agatttaaag tgaaataagg
     1381 tttatggtct taaacctagt gtgattactt gaataatgtt caaagtttat ttatcatcat
     1441 cataccagct agcatacata ttgtagttat ttgatatacg atttatttca ccttcaagta
     1501 gctcagtgtc aaccgttttt ataagtcttg caggcacacc tgcatataaa ctgccagatt
     1561 taataattgt attctttgaa acaacagccc cggcagcaat cattgaatta ctttccacaa
     1621 caactccatc catcaaaatt gctcccattc caactaatac gttgttgtga attgtacaac
     1681 catgaattat tgccgaatgt gcaattgata cattatcacc aatgtttacc ggagcttttt
     1741 gatatgtgca gtgtatcaca acattatcct gaatgtttac attattacct attcgaatat
     1801 agtgcacatc accacgtaca actgaattaa accaaatgct acaatcattg ccaataatta
     1861 cgtcaccggt taatgttgca ttatcggcaa taaagcaatt agctccccat tttggcaata
     1921 ctccttttac tgattttatt gttgccataa ttcattgatt cttttaataa ttgcttctta
     1981 tagagtattg atcaggaaaa cttaaaacaa ttctgaagta taattagtaa ttgtcaattt
     2041 tacaatacat taaccaggat aatttatatt gtaatgtagt ccaatactct cttttcgttt
     2101 catcgctaat ctaattatca ggtaagctac attaatcata ttcctcaatt cacatatcgg
     2161 ttctgaaact actgatttgt caaaaaggtc ttcagtttcc cggtagataa tatttaacct
     2221 gtcaagtgct ctttttagtc gtagattcga tcgaacaata ccaacataat tactcataat
     2281 cgattgaagt tctttttttg actgtgtaac taatatcatc tcctcattaa gtactgttcc
     2341 tttatcatcc caatcgggta tattagcttc aaaattaata ttagaaataa ttgacgatgc
     2401 tttttgagct gccctgtgtg agaatacagc agattctaac aaagagttag atgctaatcg
     2461 gtttgcacca tgcaaacctg tatttgcaac ctctccagag gcaaataaat tactaatgct
     2521 agtttgtccg tgcttgttgg taactatacc accacatgaa taatgtgcag caggtacaac
     2581 aggtatcata tctttggtga tatcaatacc aatgctcagg cattttgcat agatggtggg
     2641 gaagtggtta agtatttcgt ctttacttat ttttcgtgta tcgagataga caaactcatc
     2701 accactaatt tttaattcat tgtcgatagc tctggcaaca atatcacgtg gagcaagaga
     2761 tcctctttc
//
LOCUS       DASCQP010000280         4424 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001049470, whole genome shotgun sequence.
ACCESSION   DASCQP010000280 DASCQP010000000
VERSION     DASCQP010000280.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4424)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4424)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4424
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001049470"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(160..1785)
                     /locus_tag="QF480_04745"
     CDS             complement(160..1785)
                     /locus_tag="QF480_04745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018359947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HJN05900.1"
                     /translation="MQKLLLLGDEAIAQGAIDAGISGVYAYPGTPSTEITEDIQSSKD
                     AIEREIRSSWSANEKTAMESAIGMSYAGKKSLVCMKHVGLNVAADAFINSAITGANGG
                     LVVLSADDPSMHSSQNEQDSRFYGKFALIPILEPSNQQEAYDMTRYAFELSEKFEIPV
                     LIRITTRLAHSRAGVERKAMIHQNTVHLPTNPMQFILLPAIARKQYDKLLKKQTEFEA
                     DACSSGYNDLTIGDDKSIGIIACGLANNYLKENYQNTKIPYSVLKIGQYPIPYDLLNK
                     LYESVDEILVLEDGYPIIEEQLRGILNKGKKIHGRMDGSIPMAGELNPNIVGKALNLK
                     IEEGYPTPSILQNRPPSLCEGCSHNDTFLALNEVMQDYSPGRIFSDIGCYTLSALAPL
                     KSINTCVDMGASITMALGAADAGLVPSVAAIGDSTFTHSGITGLLDAVNTKSPITVII
                     NDNSTTGMTGGQDSSAFEKVEDIFRGVGVEENHIRIIIPLRRNHDKNLKVVREELSYD
                     GVSVIIAKRECIQTLRRRMKLKALKKREPELAD"
     gene            1980..2579
                     /locus_tag="QF480_04750"
     CDS             1980..2579
                     /locus_tag="QF480_04750"
                     /inference="COORDINATES: protein motif:HMM:NF016239.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008770 - [acyl-carrier-protein]
                     phosphodiesterase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ACP phosphodiesterase"
                     /protein_id="HJN05901.1"
                     /translation="MNFLAHAHLSQDNEDVIFGNFIADAIKGKSYLKFRKDIMYGILL
                     HRDIDTFTDKHRIVKNSRAEIRENFGKFSGIVVDIYYDHFLARNWTQYHNLELAQYST
                     HVYLILAKRFLLLPSRIKLLLPFLIGQNWLVGYANLNDLQNVFNGMDRRTGYVSGMGN
                     AVKVLEEKYDLLHMDFKAFYSELEKYSANRLFEISNEGN"
     gene            complement(2671..3267)
                     /locus_tag="QF480_04755"
     CDS             complement(2671..3267)
                     /locus_tag="QF480_04755"
                     /inference="COORDINATES: protein motif:HMM:NF013502.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheB"
                     /protein_id="HJN05902.1"
                     /translation="MSYNAVVIGASAGGFYAFRKLIPKMPKDFSMPILIVQHTSPTSD
                     NYLAQFLNKLSKLNVKEVDEKEEIKSGYVYIAPPNYHLLIEEDHTLSLSTEEKKNYSR
                     PSIDILFETAAIAYGKSLIGIILTGANDDGAEGLLAIQKAGGFCIVQKPDDAEVDTMP
                     IAAIEQAKPNKILKLDEIAKFLTKLDNPVKQKTQTKNK"
     gene            complement(3357..4205)
                     /locus_tag="QF480_04760"
     CDS             complement(3357..4205)
                     /locus_tag="QF480_04760"
                     /inference="COORDINATES: protein motif:HMM:NF013867.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008983 - protein-glutamate
                     O-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-glutamate O-methyltransferase CheR"
                     /protein_id="HJN05903.1"
                     /translation="MNKKSDNNNQTINIELQLILEAIYSKYGYDFRNYSRAHVKRRLL
                     NKLYSSKLKSISEMQHKVLHDPVFFESLLRDLSINVTEMFRDPGFYLALRKEVIPILK
                     TYPFIKIWHAGCSTGEEVYSFAVVLKEEGLYDRTQIYATDFNHEVLDLAKKGIYPIDR
                     IKEFTANYQSAGGTQSFADYYMANYNSVIYDPSLKKNLVFAEHNLVTDSVFAEVNLVI
                     CRNVLIYFNKELQNRVVSLFYDSLVNGGYLGLGSKETVQFTTKNNKFDIINNTEKIYK
                     KKIIKE"
BASE COUNT         1358 a          767 c          712 g         1587 t
ORIGIN      
        1 aatttcttct ttttccattt tatgttaact ttatgagaca ttgtcactaa gttacctaca
       61 atattcattc tcggatgctg tgctatcttt agctcatggg tatttcatct atataaattt
      121 atttcaagat caccaactag attacatttc ataaattact taatcagcta actcaggttc
      181 acgcttttta agagctttta gtttcatccg gcgtcttaga gtttgaatac attcacgttt
      241 agcaataata acagatactc catcataact gagttcctct cttactactt ttaggttttt
      301 atcatgattt cttcgtaatg gtattataat cctgatgtgg ttctcttcta cgccaacacc
      361 tctaaatata tcttcaactt tttcaaatgc agacgaatct tgccctccag tcatgccagt
      421 tgttgaattg tcgtttatga taacagttat tggagatttt gtatttacag catcaagaag
      481 gccagtaatt cctgaatgcg tgaatgttga atcaccaata gctgcaactg aaggaaccaa
      541 gcctgcatct gctgcaccca aagccatagt tattgaagct cccatatcta cacaagtatt
      601 tattgattta agtggagcta aggcactcaa agtataacaa cctatatcag agaaaatcct
      661 acctggtgaa taatcctgca tcacttcatt taacgccaaa aatgtatcat tatgagaaca
      721 cccttcacat aatgacggag gcctgttctg taaaattgaa ggtgtaggat atccttcttc
      781 gattttaaga ttaagggctt taccaactat atttggattt aattcacctg ccattgggat
      841 actgccatcc attcttccgt gtattttctt tcccttgttc aaaataccac gtaattgctc
      901 ctcgataatt ggatatccat cctcaagcac tagaatttca tcaacagatt catatagttt
      961 gtttaacagg tcatatggaa ttggatattg gcctattttt aatactgagt aaggtatctt
     1021 agtattctga taattttctt ttaaatagtt gtttgctaat ccacaggcaa ttatgccaat
     1081 agatttatca tcgccaattg ttagatcgtt ataccctgaa ctacaagcat ctgcttcaaa
     1141 ctctgtttgt tttttcaata atttatcata ctgttttctt gcaattgctg gaagtagtat
     1201 aaattgcata gggttggttg gaaggtgaac cgtattttga tgaatcattg ctttacgttc
     1261 aactccagct cttgaatggg cgagccgagt agtaattcta atcagaacag gtatctcaaa
     1321 tttttcactt agttcaaaag catatcttgt catatcatat gcctcttgct ggttcgaggg
     1381 ttccagtata ggaatcagtg caaactttcc gtagaatctg gagtcttgct cattttgtga
     1441 ggaatgcatc gatggatcat cggccgagag aactacaagg cctccgtttg cacctgtaat
     1501 agcagaattg ataaaagcgt cggccgcaac atttagccca acatgtttca tacatacaag
     1561 cgattttttg ccagcatatg acattccaat cgcactttcc atagctgtct tttcgttagc
     1621 agaccaactc gatcgtattt ctctttcaat ggcatctttt gatgattgaa tatcttcggt
     1681 aatttctgtt gaaggtgtgc caggatatgc gtaaacgcca gatatcccgg catctatggc
     1741 accttgagcg atggcttcat cacctaagag taataacttt tgcatcacgt attatagagt
     1801 ttgtttttgt agaaatttat gatgcaaaaa tatcaaaaat ccagcaaatt tctggcccag
     1861 ttttttaatc gataatgatt ataaattgaa taaattacta atattgccat ctgacttatg
     1921 ctatattaga tttgttttgc ttagtcagtt tcagtttgtc tttgtatatt tgattatcta
     1981 tgaatttcct cgctcatgct cacctttctc aagataacga agatgttatt tttggtaact
     2041 ttattgctga cgcgattaag ggtaaatcgt atttaaaatt tagaaaagat ataatgtatg
     2101 gaatactact ccatcgtgat atagatacgt ttaccgataa acatagaatt gttaaaaata
     2161 gtcgagctga aattagagag aattttggta aattttcagg aattgttgta gatatttatt
     2221 atgatcactt tttagctaga aactggacac aataccataa tttggaactt gcacaatatt
     2281 ctactcatgt ttacttaatt ctagcaaaaa ggtttttgtt attacctagt agaattaaac
     2341 tcttattacc ttttttaatt ggacagaact ggttagtggg ttatgcaaat ttgaacgatc
     2401 tccagaatgt atttaatggg atggatagaa gaacaggcta tgtgtcggga atgggaaacg
     2461 ctgtaaaagt tttggaagag aaatatgatt tattgcatat ggattttaaa gcgttctata
     2521 gtgaactaga gaagtactca gcgaatagat tgtttgaaat atctaacgaa ggaaattgat
     2581 aatactaaaa gcatattgga agataacgtg aattcactaa cttgtacttt tatccatttt
     2641 tgttgatgta taagtttcta tagtttatta ttacttattc ttagtttgcg ttttctgttt
     2701 caccggatta tcaagtttgg ttagaaattt ggcaatttca tctaacttta aaattttatt
     2761 aggtttagct tgttcaattg ctgcaattgg cattgtatct acttctgcgt catccggttt
     2821 ttgcacaatg caaaacccgc cagccttctg tattgcaagt agcccttctg caccatcatc
     2881 atttgcgcct gttagtatga taccaattag acttttacca tatgcgattg ctgctgtttc
     2941 aaatagaata tcaattgaag gacgggaata attctttttt tcttcagtgg ataaagataa
     3001 agtatgatct tcctcaatta gtaaatgata atttggaggg gcaatataaa catacccaga
     3061 cttaatttct tctttctcgt ctacttcttt tacattgagt ttcgataatt tatttagaaa
     3121 ttgggccaaa taattatcgg aagtcgggct ggtatgctgt acgattaaaa taggcatgga
     3181 aaaatcctta ggcatttttg gtattaattt cctaaatgca taaaatccgc cagctgatgc
     3241 tcctattaca actgcattgt aagacatgaa aaataggtat tttattatta tttatttggt
     3301 ttagaaacca gtctcattaa gaaaccttcc ttctcatcaa cttcatacaa attatatcat
     3361 tctttaatta ttttcttttt atagattttt tccgtgttgt taataatatc aaacttatta
     3421 ttttttgtag taaactgaac tgtttctttc gaccctaatc ccaaataacc tccattaacc
     3481 agactatcat aaaaaagact aacaaccctg ttttgcaatt ctttgttaaa ataaataagt
     3541 acgttacggc atattactaa atttacctca gcaaatacac tatccgtaac caggttatgc
     3601 tcagcaaaaa ccagattctt ttttaatgat gggtcatata tcaccgaatt ataattggcc
     3661 atgtagtaat cagcaaatga ttgagtacca ccagctgatt ggtagttagc tgtaaattcc
     3721 tttattctgt caataggata aatgcctttt ttagctaaat ctaatacttc atgattaaaa
     3781 tcggttgcat atatctgtgt acgatcatat aaaccttctt ctttcaaaac tacagcaaag
     3841 gaataaacct cctcgcctgt ggaacaacca gcatgccata tcttaataaa aggatatgtt
     3901 ttaagtatgg gaattacttc tttacgaaga gcaagataga aaccaggatc gcgaaacatt
     3961 tcggtaacat ttattgatag gtcacgaagc aatgattcaa aaaaaacagg atcgtgaaga
     4021 actttgtgtt gcatttccga aatgcttttg agctttgaag aataaagctt gttcaatagt
     4081 ctacgtttta catgtgctct actgtaattc ctaaagtcat atccatattt actataaatt
     4141 gcctccagaa ttaattgcaa ttcaatatta atagtttgat tattattatc acttttttta
     4201 ttcacttatc ttttcaagta tttaaatttc agaaaaattt ctattattaa tttacgaata
     4261 attaaatatt gtctttgtta attttaagtt tataatcatt caaaaaattt aggtaaacta
     4321 gtaatatcaa tacaaccaaa cacgaagcaa tgacaagagt ttgtcttttg caacaggttt
     4381 tgagagataa tcgttagcac ctgcagctat gcatttatcc ctgt
//
LOCUS       DASCQP010000281         3361 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001050033, whole genome shotgun sequence.
ACCESSION   DASCQP010000281 DASCQP010000000
VERSION     DASCQP010000281.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3361)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3361)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3361
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001050033"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..196)
                     /locus_tag="QF480_04765"
     CDS             complement(<1..196)
                     /locus_tag="QF480_04765"
                     /inference="COORDINATES: protein motif:HMM:NF013607.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05904.1"
                     /translation="MRKKYSEKNIDGIAQSAGFSPETINDPPDYRAVVAAEKYDIDLS
                     GSSRIFVKKDFDKFDKIYVMD"
     gene            complement(373..1809)
                     /gene="dnaA"
                     /locus_tag="QF480_04770"
     CDS             complement(373..1809)
                     /gene="dnaA"
                     /locus_tag="QF480_04770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013610367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA];
                     GO_process: GO:0006275 - regulation of DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HJN05905.1"
                     /translation="MNKKHVEVWEKCLAVIKDNIPPQSYNTWFVPIVPINLEKDVLTI
                     QVPSQFFYEWLEEHYIALLSKTIRMQLGASATLEYSVIIDNNYHKSKPYAVKYPATNR
                     KATQNKPVSMPLDLNKGKTRDIPNPFIIPGLKKLKVESQLVDTYSYDNFVEGECNRLA
                     RSAGWAIAENPGKTAFNPLLIYSSVGLGKTHLAHAIGLQVKKNYPDKIVLFVKTDQFM
                     NQYIDSVRNNNQNDFVHFYQMIDVLIIDDIQFIAGKEKTQDVFFHIFNHLHQNNKQIV
                     LTSDKPPVELKGMEPRLLSRFKWGLAADLQMPDLETRFAILKKKLYKDGIEMPYEVIE
                     YLAYSITTNIREMEGALISILAQSTLNKKAITLELAKQMIDKFVKSTTREISIDYIQK
                     VVCDYFSVALDILNSKTRKREIVQARQLAMYFSKMHTKNSLATIGLHCGNKDHATVLH
                     ACRTVNNLIETDKQFRVYVDDIDKKLKL"
     gene            complement(2065..2625)
                     /locus_tag="QF480_04775"
     CDS             complement(2065..2625)
                     /locus_tag="QF480_04775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018338550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YigZ family protein"
                     /protein_id="HJN05906.1"
                     /translation="MEISEYNTLLGNNDGYYKDKGSKFIALAYNVKSEQDAKEILNTV
                     KKKYYDARHHCYAYRITPEKEFSRSSDDGEPSGTAGKPILNQLLSFELFNVMIIVVRY
                     FGGTKLGVSGLIRAYKAATRDVIQNNKIVKSYITRQIKLSFDYPKMNQVMRIIKEENI
                     KVIEHDFATNCKIIIEIKKMQKKMPL"
     gene            2839..>3361
                     /locus_tag="QF480_04780"
     CDS             2839..>3361
                     /locus_tag="QF480_04780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05907.1"
                     /translation="MRRLIITFLFLSTISVLAQYSSSDNIFYTRFEGVIGNNIQVKAN
                     IVRLFDKLSGNYQYRFINEDTEMYYGKIINLNGDVNDEQADLKEMGQESITFTGILRQ
                     DSFIGVWNTPDNKQLTFDMKEYYPKGTLPFDIYYLHSEGKLVPDNNNSPIAEIELTLI
                     FPLDEYFQSGIVDS"
BASE COUNT         1108 a          569 c          487 g         1197 t
ORIGIN      
        1 tatccattac atatattttg tcaaatttat caaagtcctt ctttacaaat attcttgaag
       61 aaccgcttaa gtcaatatca tatttttctg cagctacaac tgctcggtag tcaggaggat
      121 cattaattgt ttctggagaa aaaccagcag actgagcaat tccatcgatg tttttttcac
      181 tatacttctt tctcaaaaaa gctgctgcta aaggcgagcg acatatatta cccttacaga
      241 caaataggac attcatattg tttaattatt tatttttttg cgaaaagtac taaaattatt
      301 tgaaaaaagc aaataacaaa gttctcaata atttagataa tttggctaat ctctagaaaa
      361 ccagtactat aattataatt ttaatttttt gtcaatatca tccacataaa cccgaaactg
      421 cttatcggtt tcaataagat tattgacagt tcgacatgca tgcaatacag ttgcatggtc
      481 tttattacca caatgtaatc caatggtggc taacgaattt ttagtatgca tttttgaaaa
      541 gtacatggct aattgccttg cctgtacaat ttctcgtttc cttgttttcg aattaagaat
      601 atcaagcgca acactaaaat aatcacaaac cactttttga atataatcga ttgagatttc
      661 gcgggttgta cttttcacaa atttatcgat catttgtttg gctaactcta atgtaatagc
      721 tttcttgtta agtgttgatt gggcaagaat cgaaatcaat gcaccttcca tttccctaat
      781 gttagttgta atgctatatg ccaggtattc aataacttca tatggcattt caattccatc
      841 tttgtaaagt ttctttttta agatggcaaa tcttgtttcc agatctggca tctgaagatc
      901 agcagcaagg ccccatttaa acctagataa caacctgggt tccattcctt ttaactctac
      961 tggtggttta tcagaagtaa gtacaatttg tttattgttt tggtgaagat ggttgaaaat
     1021 atgaaaaaat acatcctgtg ttttttcttt cccagcaata aattgtatat cgtcaataat
     1081 aagcacatca atcatttggt agaaatgtac aaaatcattt tggttattat ttctaaccga
     1141 atcaatatat tggttcataa attgatcggt tttgacaaat agtacgatct tgtccggata
     1201 attttttttc acttgcagac caatggcatg tgcgaggtga gttttaccaa ggcctacact
     1261 actataaatt aataatggat taaaagctgt tttaccagga ttctcagcaa tagcccatcc
     1321 agcagagcgg gctagcctat tacattctcc ctcaacaaag ttgtcgtatg aatatgtatc
     1381 caccaactgt gattctactt taagcttttt aagtcctggt ataataaatg gatttggaat
     1441 atccctggtt tttcctttat taagatcaag tggcattgac acgggtttgt tttgtgtggc
     1501 ctttctatta gttgccggat acttcacagc ataaggtttt gatttatggt agttgttgtc
     1561 gataattaca ctatattcaa gcgttgcact agcaccgagt tgcatacgaa tagttttgct
     1621 caataaagca atataatgtt cttctagcca ttcgtaaaag aattgacttg gtacttgaat
     1681 agtcagcaca tctttctcca aattaattgg cacaattgga acaaaccacg tattataact
     1741 ttgaggggga atattgtctt taattactgc taaacatttt tcccagactt caacatgctt
     1801 tttattcatc ttttattagt agaattttac cgaaataata aagatttagt tagtaaaaaa
     1861 cctaacgtgt tataattcag cctacttaag ccaaatacta gtaattttat tagggaaaac
     1921 aaatatcaat taaaaattct gaataaaaaa attcaaaaac acttgacttt ttaaaattat
     1981 tgttataaat gtgtacagtc caaaaaaatt atatctgctt gtttttcaaa caggttataa
     2041 aaatacccct gattttttca aactttataa gggcattttt ttttgcattt tttttatttc
     2101 gataataatt ttacaattcg tcgcaaaatc gtgctcaatt actttaatat tttcctcttt
     2161 tattatcctc ataacttgat tcatttttgg ataatcaaaa gatagtttta tctgccgagt
     2221 aatatatgat ttaacaattt tattattttg aattacatct cgggttgctg ccttatatgc
     2281 ccgtatcaat ccactaactc ctaattttgt tcccccaaaa tatcttacaa caataatcat
     2341 aacgttaaac agctcaaacg atagcaattg atttaatatt ggcttaccag ccgtaccaga
     2401 aggttcacca tcatcactgc ttcttgaaaa ctctttctca ggtgtaattc gatatgcata
     2461 acaatgatgt cgggcatcgt aatacttttt cttaacagta ttaagaatct cctttgcatc
     2521 ctgctcactc tttacattat aagccaacgc tataaattta cttcctttat ctttataata
     2581 accatcgtta ttaccgagca aggtgttata ttcactaatt tccataaaaa caaattagta
     2641 tattgaataa aattattaca ctagatttta atgattgcat tacaaactgc aaaactaatg
     2701 gataatttaa tttgaggtaa atcgtaatta gttactttac ttttaaataa tatagcttag
     2761 agtgtttaat aagtattaat tttgccactc atgatataat aatattaaac aaaacaacta
     2821 caaacaattt caacacaaat gcggcgacta ataattactt ttctatttct ttccacaata
     2881 tctgtactag cacagtattc atcaagcgat aatattttct atacaaggtt tgaaggagtt
     2941 ataggaaaca atattcaagt aaaagcaaat atcgtaaggt tatttgataa gctttcagga
     3001 aattaccaat atcggtttat aaacgaagat actgaaatgt attatggtaa aattattaac
     3061 ctaaatggtg atgtcaacga tgaacaggca gatttgaaag aaatgggtca ggaatcaatt
     3121 actttcactg gaatcttgag gcaagattct tttattggcg tttggaatac tcctgacaac
     3181 aaacaactta catttgacat gaaagaatat tatccaaagg gaacacttcc ttttgatata
     3241 tactatctgc attcggaggg caaactagta cctgataata ataattcgcc aatcgcggaa
     3301 attgaactta cactgatttt tcctttagat gaatattttc aatcaggaat agttgactcg
     3361 g
//
LOCUS       DASCQP010000282         2478 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001057246, whole genome shotgun sequence.
ACCESSION   DASCQP010000282 DASCQP010000000
VERSION     DASCQP010000282.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2478)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2478)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2478
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001057246"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>2478
                     /gene="rpoC"
                     /locus_tag="QF480_04785"
     CDS             <1..>2478
                     /gene="rpoC"
                     /locus_tag="QF480_04785"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002558080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HJN05908.1"
                     /translation="RERMGHIQLVVPVVHIWFFRSLPNKIGAMLGLQTKKLEMIIYYE
                     RYAVINPGIKKSEEIDYLTFLTEEEYFDIMETLPPENQYLDDDDPDKFIAKMGAEAVH
                     DLLQRLDLDKESYNLRHKANTETSQQRKADALKRLQVFEAFRDARKRADNRPEWMIVK
                     IVPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLIEIKAPDVIMRNEKRM
                     LQEAVDSLFDNSRKSSAVKTDSNRPLKSLSDSLKGKRGRFRQNLLGKRVDYSGRSVIV
                     VGPDLKLNECGFPKGMAAELFKPFIIRKLLERGIVKTVKSAKKIVERKDAVVWDILEN
                     ILKGHPILLNRAPTLHRLGIQAFQPKLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPL
                     GNAAVLEAQILMLASHNILNPANGAPITVPSQDMVLGLYYITKARKSTDKHPVKGEGM
                     NFYSPEEVNIAYSEKQVDLHAIINVKVDVKEDGQIVNKLIETTVGRVMFNQFVPAEYG
                     FINALLTKKNLRDIIGEILKETSTDICAKFLDDIKNLGFDMAFRGGLSFNLGNVNIPD
                     EKKTLVANANEEVDEVVNNYNMGFITNNERYNQIIDIWTHANSRLTNTLMSELSNDDQ
                     GFNPVYMMLDSGARGSKEQIRQLSGMRGLMAKPQKSGAKGGEIIENPILSNFKEGLSV
                     LEYFISTHGARKGLADTALKTADAGYLTRRLVDVAQDVVINEEDCGTLRGLTIKALKK
                     NEEIVETLFDRILGRVTLHDVYHPISNEVIIEAGQEINEEIAKIIEESPVESVEIRSV
                     LTCESKRGVCALCYGRNLASGRLVQKGE"
BASE COUNT          786 a          426 c          535 g          731 t
ORIGIN      
        1 cgtgaacgta tgggacatat tcaacttgtt gtacctgttg tacatatttg gttcttccga
       61 tcattaccca acaagattgg tgctatgctc ggattacaga ccaaaaaact ggagatgata
      121 atttattacg agcgttatgc agtaataaac ccgggtatca aaaaatctga ggaaattgat
      181 tatcttactt tcctcacaga ggaggaatat ttcgatatta tggaaacact tccgccggaa
      241 aatcaatatc ttgatgatga tgatcctgat aagttcattg ccaaaatggg agctgaggct
      301 gttcatgatc tattgcaacg cttagatctt gataaagaat cttataacct tcgccataag
      361 gcaaatactg aaacatcgca acagcgtaaa gcagatgcat taaagagatt gcaagttttt
      421 gaagcattta gagatgcacg taagagagca gataatcgcc ctgaatggat gatcgttaaa
      481 attgttcctg ttattcctcc tgagctgaga cctcttgttc ctcttgatgg tggcaggttt
      541 gcaacatccg atcttaatga cctttataga agggttataa ttagaaataa tcgtcttaaa
      601 agactaatcg aaatcaaagc tcctgacgtt attatgcgta acgaaaaacg tatgcttcag
      661 gaagctgttg actcattgtt cgacaattca agaaaatcca gtgccgttaa aactgattct
      721 aacagacctc ttaagtcatt aagtgacagt ttgaagggta aaagaggccg gttccgtcaa
      781 aaccttctag gtaaacgtgt tgattattct ggccgttcag ttattgttgt tggccctgat
      841 ttgaaactaa atgaatgtgg tttcccaaaa ggtatggcag cagagctatt caaaccattt
      901 attattagga aacttcttga acgtggaatt gtaaagactg taaaatctgc taagaaaata
      961 gttgaacgga aagatgcagt tgtttgggat attctcgaga acatcctgaa aggacatcca
     1021 atattactta accgtgcgcc tacgcttcac cgtttaggta tacaggcatt tcaacctaaa
     1081 ttgatcgaag gaaaggctat ccagcttcac ccgcttgtgt gtactgcatt taatgctgac
     1141 tttgatggtg accagatggc agttcacgtt ccgttaggaa atgcagcggt tctggaagca
     1201 caaattctga tgcttgcatc acacaatatt ctgaatcccg ctaatggtgc accaattaca
     1261 gtgccctcac aagacatggt acttggtctt tattatatta ctaaagccag aaaaagtaca
     1321 gataagcatc ctgttaaggg agaaggaatg aacttctatt cacctgaaga ggtgaacatt
     1381 gcttatagtg aaaaacaggt tgatcttcac gcaataatta atgtaaaagt cgatgtaaaa
     1441 gaggacggac agatcgttaa taaacttatt gaaactacag taggtagggt tatgtttaat
     1501 caatttgtac ctgcggaata tggctttatt aatgcgttgt taaccaaaaa gaatcttcgc
     1561 gatattattg gcgaaattct aaaggaaact agcacagata tatgtgccaa attccttgat
     1621 gatattaaaa atcttggatt tgatatggca ttcagaggag gcctttcatt taatcttggt
     1681 aatgtaaata ttcctgatga aaagaaaacg cttgttgcta atgctaatga ggaagttgat
     1741 gaagttgtca ataattataa catgggtttc attaccaata acgagcgtta taatcagata
     1801 attgacatct ggacacatgc taactcaagg ttgactaaca ctttaatgag tgagttgtct
     1861 aatgatgacc agggatttaa cccggtttat atgatgctag actctggtgc ccgtggatca
     1921 aaagagcaga ttcgtcagct ctcaggtatg aggggattga tggctaagcc gcaaaaatct
     1981 ggggctaagg gtggtgagat tattgaaaat ccaattcttt caaactttaa agaaggatta
     2041 tcagtgcttg agtatttcat atcaacacac ggtgctcgta aaggtttagc tgatactgca
     2101 cttaaaactg cggatgccgg ttatcttacc cgtagactgg ttgatgttgc ccaggacgtt
     2161 gttatcaacg aagaagattg tggtacatta agaggactta ctatcaaagc tcttaagaag
     2221 aatgaagaga ttgtagaaac ccttttcgac agaatattag gccgggtaac tctgcatgat
     2281 gtttatcatc ctatctcgaa tgaagttatt attgaagctg gtcaggagat taacgaagaa
     2341 attgcaaaga ttattgaaga atcaccagtc gaaagtgttg aaatacgctc ggtacttaca
     2401 tgtgaatcga aacgtggtgt ttgtgccctt tgttatgggc gtaaccttgc ttccggacga
     2461 ttagttcaaa agggagaa
//
LOCUS       DASCQP010000283         6157 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001064131, whole genome shotgun sequence.
ACCESSION   DASCQP010000283 DASCQP010000000
VERSION     DASCQP010000283.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 6157)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6157)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6157
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001064131"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            145..2160
                     /locus_tag="QF480_04790"
     CDS             145..2160
                     /locus_tag="QF480_04790"
                     /inference="COORDINATES: protein motif:HMM:NF025486.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative porin"
                     /protein_id="HJN05909.1"
                     /translation="MLIHTNTRFKCIVSLIIFLLIPGIHNAQNITRPNSNDTTSPKID
                     STQTIISLEDKLINPNDSTLSATDSLKVIYFKGSIEKLKLNRFNFIDTNTYHFQQFDP
                     LHINNRLYSTLSNIGLAAKNLVYSPTLTTDYYLGSSVFTRYLYHNKNVKYYYPIVPYT
                     EIRYVMATNREQNLNVIFTREIFNGFTIGLDYALNYSPSNKSPYQRSGVNDQRVFFTS
                     QYYTKNKRYGLIANYLRNKIVAEENGGIKYDSIFEDNIESDRRVIPVNLMKAENMVKQ
                     SGFFIEQYFNILPPIRTSDSIKKRKIDPGSISYSFRYRRNQMIYSDDDTLTPFYIGHD
                     IPLDSVSTYDSLFQSEIQNTIKWSNIGYHENPKDKIFYIYLGATHNFIKQMLPHDSVA
                     SNISQLTPFGGIAFNFGRSFHLSVDVNYVFGNYNQNDYSVDAILNQYLGNELRNIGSL
                     KFGLNLTNRTPNWYYNNYQSNYYRWSNNLKKEKHLILTGSYTYKQFSVGAKFYTIENY
                     TYLNDSVRPQQIEKGETLLELFAEGTIPMNKFGINTRIVYQTTSQPNIIRVPSLSGVV
                     DIYLRSPIFKSAAVLQTGFQVTYFSEYYADAYMPELRLFYLQNNKKIGNYPYIDFYVT
                     LMVKRARLFFKVAHLNSYFGDYRYYLAPNYPARDSRFCFGVSWRFHD"
     gene            complement(2157..3077)
                     /locus_tag="QF480_04795"
     CDS             complement(2157..3077)
                     /locus_tag="QF480_04795"
                     /inference="COORDINATES: protein motif:HMM:NF016955.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerB family tellurite resistance protein"
                     /protein_id="HJN05910.1"
                     /translation="MKYLLLIILIGIAIYYAMKWQSKSNKQSSGRESDGNPYGNRNSN
                     SQYDRTNDDGPYAHQNQGSQKQFSAGNYAKWIGGGLGWAFGGPIGGILGFMFGSMVGS
                     TGMTNMQVGQTRAGDFNVSLLILTAAVMKADGKVTRSELQYVKQFISNNFGVDRAPQY
                     VKILGDLIKQNFNLQDVSSQIKQYMDYSSRLMLLQFLFGIALADGKSHPSEVSVIQTI
                     SAYLGITNNDYSSIKAMFIKDTNSAYNILEVSPEATNDDIKKAYRELAKKYHPDKVSH
                     LGAEIKKAAEVKILALNAAYDAIKQERGIS"
     gene            complement(3122..4459)
                     /locus_tag="QF480_04800"
     CDS             complement(3122..4459)
                     /locus_tag="QF480_04800"
                     /inference="COORDINATES: protein motif:HMM:NF027964.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="saccharopine dehydrogenase C-terminal
                     domain-containing protein"
                     /protein_id="HJN05911.1"
                     /translation="MRKILILGAGLSTYSLIDYLLVNAAKYDWHIIVADINEELARLK
                     VNGHKYGSAKVFDIVDDTESWRTIAEVDVVISMLPASMHHLVAEMCIDLRKPMLTTSY
                     ATDDIKALNEKAINAGIPIYMELGLDPGIDHMSAMNVINRVKEMGGDLTSFYSFTGGL
                     VAPESDNNPWNYKFTWNPRNVVLAGNGVSQFIRNGRYKYIPYHRLFDRVMSRKILQYG
                     DFEIYANRDSLKYRSIYKLKDIPSMYRGTIRRPGFSKAWNVFVKLGMTEDTYTLEDSE
                     NMTYLQFLNTFLRYEPDVPVEVKLQEYCANASDPVVMDKLRWLGIFDDKKVDLKNATP
                     AQILQKLLIEKWTMEPEDKDMIIMQHEFKYMFEGIEKKIISAMAVIGKNQQETAMAMT
                     VGLPLAIATKLLLTGKLNHTGVRLPIEKDIYEPILSELRTFGISFEESEYLVE"
     gene            complement(4514..5815)
                     /locus_tag="QF480_04805"
     CDS             complement(4514..5815)
                     /locus_tag="QF480_04805"
                     /inference="COORDINATES: protein motif:HMM:NF017072.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional lysine ketoglutarate reductase
                     /saccharopine dehydrogenase family protein"
                     /protein_id="HJN05912.1"
                     /translation="MHKIGIRYEDKYVMERRVALVPTHVKELIDKGLEFKVVKSQKRI
                     FKDKEFEATGAQLVDEIKDSSVVIGVKEMPINFFEDKKTYIFFSHTIKGQPYNMPLLK
                     QMMKKKVNLIEYECIVNEKNQRLIFFGRFAGLAGMINSLWSVGQRWEELGFLTPFLQL
                     KQTHNYNSLDEAKKAITKVADEIKKGGLPRELEPIVVGLTGYGNVSRGAQEILDLFPI
                     KEITPDELLTTFSEGHKPDSLMYKVVFKESDLSEPLDSDKEFVLQEYYDHPELFKSKF
                     EQYIPHLTILMNCMYWDDKYPRIVTKDYLETLYERGDPKLTVIGDVTCDPDGSIECTY
                     KGTEIEDPVFVYDPFTRKPTMGFKGDGILVMAVDILPSELPRESSQTFSDALVGFMPE
                     IAAADFDVPYDELKLPLPIKRALILHNGELTPEYQYLKQYI"
BASE COUNT         1988 a         1151 c          926 g         2092 t
ORIGIN      
        1 tgccagcgcc aatgatactg ccataccagg tggaaaagta ggtcatcgcc aaagatttta
       61 tttaaagccc cgtactcttc tgtatggggc ttttttattt tataattata cctgagttaa
      121 aaatagtata atatctttgt aaatatgtta attcatacaa atacaaggtt taaatgtatt
      181 gtttcactta ttatatttct ccttattccg ggcattcaca atgctcagaa tatcacacgc
      241 ccaaactcta acgatactac ttctcctaaa attgattcca cacaaaccat aatttcttta
      301 gaggataaac ttattaatcc aaacgactca actttatcag caactgactc tctaaaagta
      361 atttatttta aaggaagtat tgaaaaacta aagctcaata ggtttaactt tattgacact
      421 aacacatatc attttcagca atttgatcct cttcacataa acaatagatt atactcaaca
      481 ctcagtaata tagggttggc tgcgaaaaat ctggtttact cccctaccct tacaactgat
      541 tattacttag gtagttcagt ttttacaagg tatctttatc acaataaaaa tgtaaaatat
      601 tattatccta ttgtccctta cacggagatt agatatgtga tggccacaaa tagggagcaa
      661 aatctaaatg ttatatttac acgtgaaatt ttcaatggat ttactattgg attagattac
      721 gctttaaatt actcaccatc aaataaaagt ccttatcaaa ggagtggagt aaacgaccag
      781 cgtgtatttt ttacatctca atattatact aaaaataaac gctacggctt aatagccaat
      841 tatttgcgaa ataaaatagt tgctgaagaa aatggtggta taaaatatga cagcattttt
      901 gaagataata tcgaatcaga cagacgggtt attccagtaa acctgatgaa ggctgaaaat
      961 atggttaagc aatcgggttt ctttattgaa caatatttta acatactacc gcctataaga
     1021 actagtgact ctataaaaaa aagaaaaatt gatcctggca gtatcagcta ttcattcaga
     1081 taccgacgta atcaaatgat ttacagtgat gatgatacgt taactccatt ttatatcggt
     1141 catgatattc ccttagatag cgtttcaact tatgattcct tattccaaag tgaaattcaa
     1201 aatactatca aatggtcgaa tattggttat catgaaaatc caaaagataa gatattctat
     1261 atttatctgg gtgccacgca taacttcatt aaacaaatgc tacctcatga ttcggttgct
     1321 tcaaatattt cacagttaac tccttttggc ggaattgcat ttaattttgg aagaagtttt
     1381 cacctcagtg ttgatgttaa ctatgtattt ggaaattata accagaatga ttatagcgta
     1441 gatgctattc ttaaccaata tctgggtaat gaattaagaa acatcggatc tctgaagttt
     1501 ggtttaaatt taactaatag aacacccaat tggtactata ataattatca aagtaattat
     1561 taccggtggt cgaacaatct gaagaaagaa aaacatctaa tactaactgg atcatacact
     1621 tacaaacaat ttagtgttgg ggcaaagttt tatacaattg agaattacac atatttgaat
     1681 gattcagtta gaccacaaca aattgaaaaa ggcgaaacat tattagagct atttgctgag
     1741 ggtaccatac caatgaataa atttggaatt aacactcgta tagtctatca aacaaccagt
     1801 cagcccaata tcatcagagt accatcatta tctggagtcg ttgacattta tttacgaagc
     1861 ccaattttta aaagtgctgc tgtattacaa actggatttc aggttacata tttttctgaa
     1921 tattatgctg atgcatatat gcctgaattg agactcttct atttacaaaa caataaaaaa
     1981 attggaaact atccctacat tgatttctac gttactttaa tggtaaaaag agctaggttg
     2041 ttctttaagg ttgcacatct caacagctat tttggagatt acagatatta tctagctcct
     2101 aattatccgg ctcgtgattc tagattttgt tttggggttt cttggagatt tcatgattaa
     2161 ctgatgcctc tctcctgctt tattgcatcg tatgcagcat ttaacgctaa aatctttact
     2221 tctgcagctt tcttaatttc tgctccaaga tgacttactt tatccggatg atattttttg
     2281 gctaactccc tatacgcctt ttttatatca tcgtttgtag cttcaggaga tacttcaagt
     2341 atattatagg cgctgtttgt atccttaata aacatagcct tgattgatga ataatcatta
     2401 ttagttattc ccagataagc agaaatagtt tgtatcacac ttacttcact aggatgcgat
     2461 ttcccatctg caagagctat tccaaacaaa aattgaagaa gcataagtcg ggatgaataa
     2521 tccatatact gctttatctg agaacttaca tcctgaaggt tgaaattctg tttaataagg
     2581 tctcctaaga tttttacgta ttgtggagca cggtcaactc caaaattatt cgatataaat
     2641 tgcttaacat actgaagttc agaacgcgta accttcccgt cagctttcat tacagcagct
     2701 gttaagatta ataacgatac attaaagtca cctgctcttg tttgtccaac ctgcatattt
     2761 gtcatgccgg tgcttcctac catcgatcca aacatgaacc cgagaatacc accaattggc
     2821 ccaccaaatg cccaaccaag gccccctcct atccacttag cataattacc ggctgagaat
     2881 tgtttttgag atccctgatt ttgatgtgca tacggaccgt catcattagt tctgtcatat
     2941 tgtgagttac tgtttctatt gccataagga ttaccgtcag attctctgcc agaactttgt
     3001 ttatttgatt tcgattgcca tttcatcgca taatatatgg caattcctat aagaattatt
     3061 aatagtaaat atttcattag ttgaaaatta gaaaaaataa aattggttga gatgaaaagt
     3121 tttattcaac caagtactcg ctttcctcaa aacttatacc aaacgttctt aactcggata
     3181 gaattggttc ataaatatct ttttcaatag gtaatctaac acctgtatga ttgagttttc
     3241 cggttagaag tagttttgtt gcgattgcca aaggtagacc aactgtcatt gccatagctg
     3301 tttcttgctg atttttacca atgacagcca ttgctgagat aatcttcttt tcaatacctt
     3361 caaacatgta cttaaactcg tgctgcataa taatcatatc cttatcttcg ggctccatag
     3421 tccacttttc tattaacaat ttttgcagta tttgagcagg ggttgcattt ttaaggtcaa
     3481 ctttcttgtc atcaaaaata ccaagccaac gaagtttatc cataacaaca ggatcagatg
     3541 catttgcgca atactcttgt agctttactt caacaggtac atctggctca tatcttaaga
     3601 aggtattaag aaactgaaga taagtcatat tctcagaatc ttctagtgta tatgtatctt
     3661 ctgtcattcc gagttttaca aaaacattcc atgctttaga gaatccggga cgtcgtatag
     3721 tgcctctata catggatggt atatctttta acttataaat acttctatac tttaatgaat
     3781 ctcgattagc ataaatctca aaatctccat attgtaaaat tttgcgtgac attaccctgt
     3841 caaaaagacg atgatagggt atatatttat aacgaccatt acgaataaac tgagatactc
     3901 catttccagc caaaactaca ttccttggat tccaggtaaa tttgtaattc catggattat
     3961 tgtcactttc gggggcaacc aaacctcctg tgaaagaata aaatgatgtt agatctcctc
     4021 ccatttcttt tactctgtta attacattca tagctgacat atgatctata cccggatcca
     4081 gaccaagctc catataaatt ggaattcctg catttattgc tttttcatta agtgctttaa
     4141 tatcatcagt tgcataggaa gttgttaaca ttggctttct gagatcaata cacatttcag
     4201 caacaagatg gtgcatagaa gcgggtaaca tagaaatcac aacgtcaact tcagcaattg
     4261 ttctccaact ttcggtatca tcaactatat caaatacttt ggccgagcca tacttatgtc
     4321 cattcacttt taatctagct aactcctcat taatatcagc aacaattata tgccaatcgt
     4381 atttggccgc atttactagt aaataatcaa ttaggctgta tgttgataaa cctgcaccca
     4441 gaattaatat ttttctcatt ttttaatttg tgttttatcg ctaataaata atataacaat
     4501 gtttgtaact agattaaata tattgtttaa ggtattgata ttctggtgtt agctctccat
     4561 tatgaagaat taaggcccgc tttataggaa gtggcagctt gagttcatca tatggaacat
     4621 caaaatcggc tgcagctatt tcaggcatga aaccaacaag agcatccgaa aatgtttgtg
     4681 acgactcacg tggcaactca cttggtaata tatcaactgc catcacaagt attccatctc
     4741 ctttaaatcc catagttggc ttccttgtaa atggatcata cacaaatacc ggatcttcta
     4801 tctcagtacc tttgtaagtg cattcaattg acccatcagg atcacatgta acatctccaa
     4861 taacagttag ttttggatct cctctttcat aaagagtttc cagataatct ttagttacaa
     4921 tccttggata tttgtcatcc cagtacatgc aattcattaa aatcgttaga tgtggtatat
     4981 actgttcaaa tttactttta aaaagttccg gatgatcata atattcctga agcacaaact
     5041 ctttgtcgga atcaagtggt tcactaagat cactttcctt aaaaacaact ttatacatga
     5101 gactgtctgg tttatgacct tcagaaaagg ttgtcaataa ttcatctgga gttatttcct
     5161 taattgggaa taaatcaaga atctcctgag ctcccctaga tacattgcca tatccagtta
     5221 gcccaactac aattggctct agttcacggg gtaatccacc tttcttaatt tcatcagcta
     5281 ctttagtaat agcttttttc gcctcatcca aagaattata gttgtgggtt tgttttaatt
     5341 gaagaaaagg cgttaaaaat cctaactctt cccaacgttg gcccaccgac caaagtgagt
     5401 ttatcatgcc tgctaaacct gcgaatcgtc caaagaaaat caatcgttga tttttctcat
     5461 tcacaataca ctcatattcg atcaagttaa ctttcttttt catcatttgt tttaacagtg
     5521 gcatattata tggctgcccc ttaatagtat gactaaagaa aatgtaggtt ttcttgtctt
     5581 caaaaaaatt gatgggcatt tccttaacac caattacaac agatgaatcc tttatctcat
     5641 caaccaattg agccccggtt gcttcaaatt ctttgtcttt aaagatacgt ttctgcgatt
     5701 taacaacctt gaattcaagg cctttatcaa tcaattcttt aacatgtgta ggaacaagag
     5761 caacacgtct ttccattaca tatttatctt catatcttat tccaattttg tgcataaatt
     5821 tttcatttat cattctgaat aataaaagca aacatataaa atttaatagg aaaatgatgg
     5881 cttattaaat tttttttttt agccaattca ctaacaaaat agttactcta ataatggaaa
     5941 agttgaaacc taatttataa tcattatact accggtttgt caatcaataa acatgttttt
     6001 tcctatcttt gcaggctcaa ttttgaatct tattttaatt aattttaatt ataatggcta
     6061 ataaaaaaca tgtttatcta ttcggcaacg gaactgctga aggtaacgca aaaatgaaaa
     6121 acctacttgg gggcaaaggt gcaaaccttg ctgaaat
//
LOCUS       DASCQP010000284         3461 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001068908, whole genome shotgun sequence.
ACCESSION   DASCQP010000284 DASCQP010000000
VERSION     DASCQP010000284.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3461)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3461)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3461
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001068908"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..476)
                     /gene="secA"
                     /locus_tag="QF480_04810"
     CDS             complement(<1..476)
                     /gene="secA"
                     /locus_tag="QF480_04810"
                     /inference="COORDINATES: protein motif:HMM:NF019156.3"
                     /note="functions in protein export; can interact with
                     acidic membrane phospholipids and the SecYEG protein
                     complex; binds to preproteins; binds to ATP and undergoes
                     a conformational change to promote membrane insertion of
                     SecA/bound preprotein; ATP hydrolysis appears to drive
                     release of the preprotein from SecA and deinsertion of
                     SecA from the membrane; additional proteins SecD/F/YajC
                     aid SecA recycling; exists in an equilibrium between
                     monomers and dimers; may possibly form higher order
                     oligomers; in some organisms, there are paralogous
                     proteins that have been found to be nonessential but do
                     function in secretion of a subset of exported proteins;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HJN05913.1"
                     /translation="MLSVLKKVFGDKSTKDLKDISPYVGKVKDAYNEIENLTNDELRT
                     KTAEFKKRIAEYIQEEENEIANLKESMDSNPDMDVDEKEENYLTIDKLTKKSYEKTQE
                     VLNQLLPEAFSVMKETARRFVQNEVVEVTANEFDRELGANQDSVNIKGDKAYYNNN"
     gene            765..2555
                     /gene="lepA"
                     /locus_tag="QF480_04815"
     CDS             765..2555
                     /gene="lepA"
                     /locus_tag="QF480_04815"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018361112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor 4"
                     /protein_id="HJN05914.1"
                     /translation="MKEIRNFCIIAHIDHGKSTLADRLLEFTDTVSERDLQAQVLDDM
                     DIERERGITIKSHAIQMDYAHENENYVLNLIDTPGHVDFSYEVSRSIAACEGALLIVD
                     ATQGIQAQTISNLYLAIDNDLEIIPVLNKMDLDNAMPDEVKDQIVDMLGCDYEDIIEA
                     SGKTGYGVDTILDAIIDKVPPPTGNPDAPLQALIFDSVFNSFRGIIAYFRIFNGEIRK
                     GDKVKFVNTGKEYEANEVGVLRLEQESREVLKTGDVGYIISGIKASKEVKVGDTVTHL
                     LAPCEKAIEGFEDVKPMVFAGIYPTDPDEYEELRASIEKLQLNDASLTFEPESSMALG
                     FGFRCGFLGLLHMEIIQERLEREFNMNVITTMPNVSYQVITNKNEAIEVHNPSGLPEQ
                     KYIDHIEEPFIKAQVITRTDYIGPIIKLCLDKRGELKNQIYLSTSRVELTVDMPLGEI
                     VFDFYDKLKSISKGYASFDYHISGYRPAKLIKLDILLNGEPVDALSSLTHVDNAYDLG
                     RRICVKLKDLIPRQQYDIAIQAAIGAKIIARETIKAVRKDVTAKCYGGDITRKRKLLE
                     KQKKGKKRMRQVGNVEVPQQAFLVVLKLND"
     gene            2641..2991
                     /locus_tag="QF480_04820"
     CDS             2641..2991
                     /locus_tag="QF480_04820"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HJN05915.1"
                     /translation="MTISEYNSCVDSFSDGVYRFILKNLKDTEVAHDIVQESFLKLWI
                     KRKEVDSSKGKSYLFTTAYHTMIDYIRKNSRSISIDNLESIHGESYNSFTDLKEILNL
                     AVDKLPEIQRSVVM"
     gene            3129..>3461
                     /locus_tag="QF480_04825"
     CDS             3129..>3461
                     /locus_tag="QF480_04825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05916.1"
                     /translation="MKNNIDINRANYEEYVIDYLEGSLNTFERDCFDDFLGNNPDIKE
                     EISSVNDITLKADKNIFSKKDNLKKRPIISINSINEDNYEEYFIANYENDLSDEEKKT
                     LSQFLNKNP"
BASE COUNT         1128 a          528 c          649 g         1156 t
ORIGIN      
        1 caattattat tataataggc tttatcccct tttatattta cactatcctg attggcccca
       61 agctctctgt caaactcatt agcagttact tcaactactt cattttgaac aaacctacgt
      121 gcagtttctt tcatcacact aaaagcttcc ggaagtaatt ggttcagaac ttcctgggtt
      181 ttttcataac tctttttggt aagcttatca atagtaaggt aattttcttc tttttcatct
      241 acatccatgt caggattaga atccatactt tctttaagat ttgctatttc attttcctct
      301 tcctgaatat attcagctat acgcttttta aactcagcag ttttggttct tagctcatca
      361 tttgtaagat tttctatctc gttgtatgcg tctttaacct ttccgacgta aggactaata
      421 tcttttaaat cctttgttga tttatctcca aaaactttct ttagtacact taacataatg
      481 atttctacta ttaaaatatt cagtcatcaa taattattcc attgtattaa tggccaaatt
      541 aaacagtcgc gaaattagtg ttaatttgca aactttcaag aattgaattg atttcgcagt
      601 taattgaata agttattctt aaatgctgag attgagtttg gtattttgtt gtcgtttagt
      661 cttatcgatg tgttattttt agccgttccc tctgttttat agaatagtta gtagacttaa
      721 ttaatcttgt tacgctatag gaaatgttcg tatttttgcc gtctatgaag gaaattagaa
      781 acttctgtat tatagcccat attgatcatg gtaagagtac attagctgat aggcttttag
      841 agtttacgga tactgtttct gaacgagatt tgcaagcaca agtgcttgat gatatggata
      901 ttgaacgcga acgaggtatc actattaaaa gtcatgctat tcaaatggat tatgctcatg
      961 aaaatgaaaa ttatgttctt aatctaattg atacacctgg gcatgttgat ttctcttacg
     1021 aagtttcaag atcaattgct gcttgtgaag gtgccctgct tattgttgat gctactcagg
     1081 ggattcaagc acaaacaatt tcaaaccttt atcttgctat tgataatgac cttgagataa
     1141 tacctgtatt aaataaaatg gatcttgaca atgctatgcc tgatgaagtt aaggatcaga
     1201 tagttgatat gcttggttgc gattacgaag atattattga agcaagtgga aaaacgggtt
     1261 acggcgtcga tactatcctt gatgcaataa ttgataaagt tccaccacca acgggcaatc
     1321 ctgatgcacc acttcaagca ttaatattcg actcagtatt taactcattt cgtggtatta
     1381 ttgcttattt cagaatattc aatggtgaaa taagaaaagg tgataaggtg aaatttgtaa
     1441 atacaggcaa agagtatgag gcaaatgaag ttggtgtatt aagattagaa caagaatcaa
     1501 gggaagttct taaaacaggc gatgttggtt atattatttc tggaattaaa gcctcaaagg
     1561 aagtaaaagt tggagataca gttacgcatc tactagcccc atgtgaaaag gcaatagagg
     1621 gttttgaaga tgtaaagcca atggtatttg ccggtatcta cccaacggat ccggatgaat
     1681 atgaagagct aagggcttct attgaaaagc tccagttaaa tgatgcatca ctaacttttg
     1741 aaccagaatc atcgatggca ttgggttttg gctttagatg tggtttttta ggattacttc
     1801 acatggaaat tattcaggag agattagagc gtgagttcaa tatgaatgtt ataacaacaa
     1861 tgccaaatgt ttcttatcaa gtaataacta ataaaaacga ggctattgag gttcataatc
     1921 catcaggatt acctgagcaa aaatatattg atcatattga agaaccattt ataaaagctc
     1981 aggttattac tcgcacagat tacataggtc ccattattaa actttgcctc gataaaaggg
     2041 gagagcttaa aaatcagatt tatctttcaa caagtcgtgt tgaactcaca gttgatatgc
     2101 ctcttggcga gattgttttt gatttttatg ataaacttaa aagtatttca aaaggatatg
     2161 cctcgtttga ttaccacatc agtggatata gacctgccaa attaattaaa cttgatatat
     2221 tactaaacgg agaaccggta gatgctctgt cgtcgttaac ccatgttgac aatgcctatg
     2281 atctgggacg aagaatttgt gtgaaattaa aggacctgat accaaggcaa caatatgaca
     2341 ttgccatcca ggcagcaatt ggagctaaga ttattgctcg tgaaacaatt aaagctgttc
     2401 gtaaagatgt aaccgccaaa tgctatgggg gagatattac tcgtaaacgt aaacttcttg
     2461 aaaagcagaa aaaaggtaag aagcgaatgc gccaggttgg aaatgttgaa gtcccgcaac
     2521 aagcattttt agttgtcctg aagttgaatg attaatagta ttttattttt ttcacttact
     2581 ttgtaacatt atctcattac gatcgtcata taaaaatatg aggcattatt acgcgcgcaa
     2641 atgaccataa gtgaatataa tagttgtgtt gacagctttt cagatggtgt gtacaggttt
     2701 attctgaaaa accttaagga tactgaagtg gctcatgata ttgttcagga gtcgtttttg
     2761 aagttgtgga taaaacgtaa agaagtagac tcatcaaaag gaaagtcgta tttgttcaca
     2821 actgcttatc acactatgat tgactacatc cgaaagaata gtcgtagtat ttcaattgac
     2881 aatctggaaa gcattcatgg tgagtcatat aacagcttta ctgatttaaa ggagatactt
     2941 aatttggctg tggataaact tcccgaaatc caacgatcgg ttgttatgta gcgtgattat
     3001 gagggttatt gatatgaaga gattggaaaa ataaccaatc ttagtgaatc gcaggttaaa
     3061 gtttatatat atcgcgcccg tgtgttttta aagaaattta tagtaagccc tgagcttgtt
     3121 atctgagaat gaagaataat attgacataa atagagcgaa ttacgaagag tatgtgattg
     3181 actatcttga gggttctctg aatacttttg agagagattg ttttgatgat tttttgggta
     3241 ataatcctga tataaaggaa gaaattagca gtgtaaatga tataactctc aaggctgaca
     3301 aaaatatatt ttccaagaaa gacaacctta aaaaaagacc tattatttct attaatagta
     3361 taaatgagga taattatgaa gagtatttca ttgctaatta tgaaaatgat ttatccgacg
     3421 aagagaagaa aacattatca cagttcctta ataaaaatcc a
//
LOCUS       DASCQP010000285         2762 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001070637, whole genome shotgun sequence.
ACCESSION   DASCQP010000285 DASCQP010000000
VERSION     DASCQP010000285.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2762)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2762)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2762
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001070637"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1445)
                     /locus_tag="QF480_04830"
     CDS             complement(<1..1445)
                     /locus_tag="QF480_04830"
                     /inference="COORDINATES: protein motif:HMM:NF019353.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HJN05917.1"
                     /translation="MYLNSHSYYSLRYGTYSIDALVEEALKRKIEAMVLTDINNSSGM
                     IDFVKICKVHGVKPIGGMEFRNNDELLFTGIARNNNGFRELNEYMSAINLKEKKYTSL
                     APEFNAVYIIYPFGNTIGHRLKNNEFIGVKPSQIHKLLTLSKRKLTKMVIQQPVTFSD
                     KKTWYLHKNLRAINHNILLSQLTPHMYAPQDEVFIPEADIITAFEQYPQIIKNTQDII
                     ADCEIDFDYDSSKNKQTFTGSRYDDKILLEKLAYDGMQYRYGKHNKHALKRVTGELEI
                     IDKLGFSSYFLITWDVIRYSLSRGFYHVGRGSGANSVVAYCLKITDVDPIELNLYFER
                     FINPKRSSPPDFDIDYSWKDRAEVQDYIFKRYRQKHTAFLGTSVTFKGKSIYRELGKV
                     HGLPKSEIDVLTRNPAIEKSKNHITRHIHKIATMMTDFPNMRSIHAGGILISEEPITC
                     YTALDLPPKGFPTTQWDMYVAEEIGFEKLDIL"
     gene            complement(1469..2653)
                     /gene="dinB"
                     /locus_tag="QF480_04835"
     CDS             complement(1469..2653)
                     /gene="dinB"
                     /locus_tag="QF480_04835"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:NF002677.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HJN05918.1"
                     /translation="MNNRSIIHLDLDTFFVSVERLGNSSLVGKPVIIGGMSDRGVVAG
                     CSYEARQFGVHSAMPMRMAKQLCGDAVFIRGDSEEYSKQSKLVTDIISESAPVYEKAS
                     IDEHYIDITGMDRFFGSLKWSHELRERIIKNTGLPISFGLSTNKTVSKIATNEAKPNG
                     ELYIPHKNVMPFLFPLSIRKIPMIGKQSYRLLRSMGVSTIRTLSMIPPEMIIQVMGKN
                     GISVWKKANGIDNTPVVQYSERKSISTERTFDKDTIDIKKLKNLLISMVEKISFELRK
                     KQKLTGCITVKIRYSNFDTHTLQKHLPYTSFDHVLMQTAIELFERLYTRRMLIRLIGV
                     RFSHLVGGSQQLDLFDNKPEMIDLYQAMDSIRLRYGNKAVRRAVGVKNQEAKVKRREM
                     KV"
BASE COUNT          762 a          530 c          522 g          948 t
ORIGIN      
        1 agtatgtcaa gtttttcgaa accgatctcc tcggctacat acatatccca ctgggtagtt
       61 ggaaaaccct ttgggggcaa atccagggct gtatagcatg taattggttc ttcggaaatg
      121 agaatccctc cggcatgaat actacgcatg ttcgggaaat cagtcatcat tgtggctatc
      181 ttatgtatgt gccttgtaat atggttttta ctcttttcga ttgcaggatt tctggtcagt
      241 acatcgatct ctgatttggg aaggccatgt acttttccca gctcacgata aatagattta
      301 cccttaaaag taaccgatgt gcctaaaaat gcagtatgct tttgcctgta tcgcttaaaa
      361 atatagtcct gcacttctgc cctgtctttc catgagtaat cgatgtcgaa atctggaggg
      421 gagctgcgtt tgggattgat aaaacgctca aaatacagat tcagttcgat aggatctaca
      481 tctgttattt ttaaacagta agcaacaaca ctgttagcac cactaccgcg gccaacgtgg
      541 taaaatccgc gtgataaaga atagcggata acatcccagg ttattaagaa ataagatgaa
      601 aacccgagct tgtcaatgat ttcaagttcg ccggtaactc tttttaatgc atgcttgttg
      661 tgttttccat agcgatattg catgccatca taggccagct tttctaacag tattttatca
      721 tcatagcggc tgcctgtaaa agtttgcttg tttttactgc tgtcgtagtc gaaatcaatt
      781 tcacaatcag cgataatatc ttgtgtgttt ttaataatct gtgggtattg ttcaaaagct
      841 gtaatgatgt cagcttcagg aataaatacc tcatcttgtg gagcatacat atggggtgtt
      901 agctgactaa gaagaatatt atggttgatg gcacgcaggt ttttgtgaag ataccatgtt
      961 tttttatcac taaaagtaac aggctgctga atcaccattt ttgttagttt ccttttgctt
     1021 agggttaata gtttgtgaat ttgtgatggc tttacgccga tgaattcgtt attttttaat
     1081 ctgtggccaa ttgtgttgcc aaaaggatag atgatgtaca cagcattgaa ttccggagcc
     1141 aatgaagtat attttttctc tttaagatta attgcactca tatattcgtt aagctctcta
     1201 aagccgttgt tgttgcgggc aatgcctgta aaaagtaact cgtcattatt tctgaactcc
     1261 attccgccta taggtttgac tccatgtacc ttgcaaatct tcacaaaatc aatcatccct
     1321 gatgaattgt tgatatcggt caaaaccata gcttctattt ttctctttaa ggcttcttcc
     1381 accaaagcat caatagaata agtgccatag cgaagactgt aatatgagtg agagtttagg
     1441 tacatggtat tagaagttgt tgtcttttct agactttcat ttcccgtctc ttgacttttg
     1501 cctcctgatt tttgactccc accgctcttc tcaccgcttt atttccatat cttaacctta
     1561 tgctatccat agcctgataa aggtctatca tctcgggttt gttatcaaaa agatctaatt
     1621 gctgactgcc tccaaccagg tggctaaagc gtactccaat taacctaatc agcattcttc
     1681 ttgtgtacaa tcgctcaaat aattctatgg ctgtttgcat tagtacatga tcgaacgaag
     1741 tgtaggggag gtgtttttgc agagtatggg tatcaaaatt tgagtaacgt atcttaacag
     1801 tgatacatcc tgttagtttt tgtttttttc gtagttcaaa agaaattttt tccaccattg
     1861 aaatgagcag attttttagt ttttttatat ctatggtgtc tttgtcaaaa gttcgttcgg
     1921 tactaataga cttgcgttca gaatattgta ctacaggtgt attgtctatg ccattggctt
     1981 ttttccagac tgaaatacca tttttaccca ttacctgtat tatcatctcc ggtggtatca
     2041 tgctgagggt acgaattgta gatacaccca tagatcgcaa aagtcggtag ctttgttttc
     2101 ctatcatagg tatttttctt attgacaggg gaaacagaaa tggcattaca tttttatgag
     2161 gtatatatag ttcgccattg ggtttggctt cattggtggc aatttttgaa acggttttgt
     2221 tagttgaaag tccgaatgaa atggggagac cagtattttt aattatacgt tctcgtaact
     2281 catgactcca ttttaagctg ccaaaaaagc gatccatacc cgttatgtca atgtaatgct
     2341 catcaatgga agctttttcg taaacaggtg cactttcgga aattatgtcg gttaccaatt
     2401 tcgattgctt gctgtattct tccgaatcac cacgaataaa aacggcatca ccacatagtt
     2461 gcttagccat acgcattggc atagccgagt gtaccccaaa ttgtcgtgct tcataactgc
     2521 atcctgccac cacaccccgg tccgacatac cccctatgat aacgggcttg cccacaagcg
     2581 acgaatttcc taaacgctca accgatacga aaaatgtgtc caggtctaaa tgaatgatac
     2641 ttcgattatt caattttatt tatttttttg acgaaatact tgataattaa aatatttgta
     2701 ttacttttga ttataatata agcaattatt cgactacaat ataatcatta ataaaaataa
     2761 tg
//
LOCUS       DASCQP010000286         3125 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001070749, whole genome shotgun sequence.
ACCESSION   DASCQP010000286 DASCQP010000000
VERSION     DASCQP010000286.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3125)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3125)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3125
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001070749"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..584
                     /locus_tag="QF480_04840"
     CDS             <1..584
                     /locus_tag="QF480_04840"
                     /inference="COORDINATES: protein motif:HMM:NF017050.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GMC oxidoreductase"
                     /protein_id="HJN05919.1"
                     /translation="SHIEPVRYGAGSNFWKLMGVPLTFGSNIFVRIGKLLFDFVRHPI
                     SWLRIYFTKKFSERSIILLFMQHLDSTVKFKKGLFNLTSHISTGIAPSAFIPEAKELA
                     ENASKIINGKPFVLCTEALTGIPTTAHILGGAVIGKTAKTGVIDENHKVFGYENMYVC
                     DGSAVSANPGVNPSLTITAMTEMAMSKFPHKGT"
     gene            complement(633..2273)
                     /locus_tag="QF480_04845"
     CDS             complement(633..2273)
                     /locus_tag="QF480_04845"
                     /EC_number="6.3.5.1"
                     /inference="COORDINATES: protein motif:HMM:NF010588.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003952 - NAD+ synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD+ synthase"
                     /protein_id="HJN05920.1"
                     /translation="MKIALAQINYHIGNFDSNTSKIIEAIKRGEKEGSDIVVFSELAI
                     SGYPPRDFLEFTDFVEQCISSLNKIVKYCTKTAAVVGLPTFNHNEKGKPLYNSAAFLA
                     DGKIKSLTNKTLLPNYDIFDEYRYFEPNNEFNLVVYKGCKIAITICEDLWNVQDNPLY
                     TINPMDELMSQSPDLMINIAASPYNYHQTKVRKEVLRKNAIQYNMPLYYVNHVGAQTE
                     LLFDGGSLVMNSNGEIVDELSYFEEDFKVFDTDEVAKNKLSEYKELDRIEVADIHDAL
                     VMGIRNYFQKLGFSKAILGLSGGIDSALTAVLAAEALGRENVYNVLLPSRYSSDHSID
                     DSVQLAKNLNMPYDIINIEEAFGSFENILEPYFKGFPANITEENLQARTRGVILMALS
                     NKFGYILLNTSNKSEAAVGYGTLYGDMNGGLSVIGDVYKTQAYELARYINRKKEIIPE
                     NIITKPPSAELRPNQKDSDSLPDYDILDEILYQYIEQRKGPKEIVDMGFEKILVDRIL
                     KLVNTNEYKRHQTPPMLRISNKAFGMGRRMPIVAKYLG"
     gene            complement(2382..3059)
                     /locus_tag="QF480_04850"
     CDS             complement(2382..3059)
                     /locus_tag="QF480_04850"
                     /inference="COORDINATES: protein motif:HMM:NF024895.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porin family protein"
                     /protein_id="HJN05921.1"
                     /translation="MKRILTIFLIAISISLMAQNKPFQFGIKAGPNMGWFSTSADNYQ
                     NKGVDFGGSWGFIADFFIMENYSFSTGFDIVYLNGTMSYPDVYEYDTSSVKISGTLKR
                     SYRTKYVKIPFVFTMKTNEIKGVKYYGQVGFGLSILFAAKAKDDFTGDNGEHITTPKH
                     NIYDDLLPTRESLILGAGMEIPLHGSTIIRVGLVYDNAFINILRGFNTVNTSAKNNGR
                     NVSLPLI"
BASE COUNT         1007 a          582 c          504 g         1032 t
ORIGIN      
        1 actctcacat tgaaccagta cgatacggcg caggttcaaa tttttggaaa cttatgggtg
       61 taccccttac ttttggtagt aatattttcg tacgaattgg gaaattacta tttgacttcg
      121 taaggcatcc tatttcttgg ttaaggatat atttcacaaa aaaattctct gaacgatcaa
      181 ttatcttgtt attcatgcag catctggaca gtactgtgaa atttaaaaag ggattattca
      241 acttgacttc tcatatttca acaggtatag ctccatcagc atttatacct gaagctaaag
      301 aattagcaga aaatgcatca aagattataa acggcaaacc atttgtcctt tgcactgaag
      361 cccttacagg aatacctact acagcacata tattgggcgg tgcagtgatt ggaaaaactg
      421 caaagacagg agtgattgat gagaatcata aagtttttgg ttatgaaaat atgtatgtat
      481 gtgatgggtc agcagtttca gctaacccgg gtgtaaatcc ctcccttaca ataactgcta
      541 tgactgagat ggctatgagc aaatttcctc ataagggaac ttaataatct agcaacaatt
      601 accaaagtta gttaagcaca attgtaattt aatcacccta aatacttagc cacaataggc
      661 atcctcctgc ccataccaaa tgctttattt gatattctta acattggagg agtttgatgg
      721 cgtttgtatt catttgtgtt aacaagtttc aggatcctat caaccaaaat cttctcaaaa
      781 cccatatcta caatttcttt tggtcctttt cgctgttcga tatattgata taggatttca
      841 tcaaggatat catagtctgg tagtgagtcg gagtctttct ggttgggacg aagctcggct
      901 gaaggtggtt tggttatgat attttcagga attatctcct ttttgcgatt tatgtaacga
      961 gcaagttcgt aagcctgagt tttataaaca tcaccaataa ccgacagccc tccgttcata
     1021 tcgccatata gagtaccata ccctactgca gcctcgcttt tgttgcttgt atttaaaagt
     1081 atatatccaa atttattcga tagcgccata agaattacac cacgcgtacg tgcctgaagg
     1141 ttttcttcgg ttatgttagc cggaaatcct ttaaaataag gttcaagtat attttcaaat
     1201 gaaccaaatg cctcctcaat attgataata tcatagggca tatttaggtt tttggctagc
     1261 tgaactgagt catcaatcga atgatctgat gagtatcttg atggaagtag aacattatat
     1321 acattttctc tgccaagagc ttcagcagca aggacagccg ttaatgcaga gtcaatacct
     1381 cctgacagtc caagtatagc tttactaaac ccaagtttct gaaaataatt acgaataccc
     1441 ataaccaacg catcgtggat atctgcaact tctatccgat ccaactcttt atattctgat
     1501 agtttgtttt ttgcaacctc atcagtatca aaaactttga aatcttcttc aaaataagac
     1561 agctcatcaa caatttcacc attagaattc ataaccagtg aaccaccatc aaatagtaat
     1621 tcagtttgag cacctacatg attaacatag tataatggca tattatactg aatggcattc
     1681 tttcttagaa cttcctttct gacctttgtt tgatgataat tatatggtga ggcagcaata
     1741 tttatcatta aatcaggaga ctgactcatt agttcatcca taggatttat ggtgtatagt
     1801 ggattatcct gtacgttcca caaatcctca caaatagtga tagctatttt acaaccttta
     1861 taaacaacga gattaaattc attatttggt tcaaaatatc gatactcatc gaagatatca
     1921 taattcggaa gaagtgtttt attagtgagc gattttatct tgccatctgc caaaaatgct
     1981 gcagaattat ataatggttt gcctttttca ttatgattaa aagttggcaa gcctaccact
     2041 gcagcagtct ttgtacaata tttaacaatt ttgtttagtg atgatatgca ttgttcaaca
     2101 aaatcggtga actctaaaaa atcacgggga ggataaccgg atattgctag ttcagagaac
     2161 acaacaatat cagatccttc tttctcacca cgcttaatag cttctattat cttggaggtg
     2221 ttactatcga agttgccgat atgataattt atttgtgcta aagctatttt cattctcaac
     2281 tttcaacttt actcaattac ttaatcaagc atatattaag agggtggtgt atgtttattg
     2341 tactttctta atcccaacag ataatgttta aaatagaata cctatatcaa gggcaatgaa
     2401 acgtttctac cgttattctt ggctgacgta tttacagtat taaaaccacg aagtatgttt
     2461 ataaaagcat tatcatatac tagcccaaca cgaataattg tagaaccatg caaagggatt
     2521 tccatacctg cccctagtat taatgattca cgtgttggaa gcaaatcatc ataaatatta
     2581 tgtttaggtg ttgtgatatg ttccccatta tcgcccgtga aatcatcttt ggcctttgca
     2641 gcgaagagaa tacttaaacc aaaaccaact tgaccataat attttacacc tttaatctca
     2701 ttggttttca tcgtaaaaac aaaaggaatt ttaacatact ttgttctata acttcgcttc
     2761 aaagtgccag aaattttaac agatgaagta tcatattcat aaacatcagg atatgacatt
     2821 gtaccattga gataaacaat atcaaaacct gtggaaaatg agtaattttc cataataaag
     2881 aaatcggcaa taaatcccca agaaccacca aaatctactc ctttattttg ataattatca
     2941 gccgatgtac taaaccatcc catatttggt cctgctttaa taccaaactg aaatggctta
     3001 ttttgagcca ttaggcttat cgatattgct attaaaaata tagtaagaat cctcttcata
     3061 aacattagtt taacaataaa tttattggcc agtatggcaa ctattctacg ttattttctt
     3121 taata
//
LOCUS       DASCQP010000287         1731 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001073926, whole genome shotgun sequence.
ACCESSION   DASCQP010000287 DASCQP010000000
VERSION     DASCQP010000287.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1731)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1731)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1731
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001073926"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            75..821
                     /gene="gpmA"
                     /locus_tag="QF480_04855"
     CDS             75..821
                     /gene="gpmA"
                     /locus_tag="QF480_04855"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005789269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004619 - phosphoglycerate mutase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase"
                     /protein_id="HJN05922.1"
                     /translation="MKRLILVRHGQSVWNKENRFTGWTDMPLSEKGVAEAIKAGKILK
                     ENGFNFKVAFTSYLTRAIKTQWLILEEMDLMWIEERKTWRLNEKHYGILQGLNKIETA
                     EKYGADMVQLWRRSFDTPPNPLDAEDERNPKFDSRYAALTADELPMTESLKEVIERLI
                     PYWESEIKPVLHENNDLLITAHGNSLRALVMHLKNMSREEILGFNIPTGIPYIFELDD
                     DLNFIKDYFLGDPEEIKILMEQVANQAKGK"
     gene            867..1598
                     /locus_tag="QF480_04860"
     CDS             867..1598
                     /locus_tag="QF480_04860"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012376.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase family protein"
                     /protein_id="HJN05923.1"
                     /translation="MIKKWVIPDIHGCIDTLKTLIENQIKPNKNDHLIFLGDYIDRGP
                     DSKGVLDYIMRMQQNEYNITALLGNHEDYCIRAYDDDLKHKGFLGFRPKRRIHREWDN
                     YGGIEALESFDIDSPKDIPDKYINWLKALEYYTEVDDFIIVHAGLNFKVDDPFTDKHA
                     MIWIRDFQVDSAKISNKKIIHGHVPVNLEFIELSLNNSEYKFIDLDNGIYINDRAGYG
                     NLVALELTDMRYVVQSLMDEVTYRK"
BASE COUNT          633 a          220 c          347 g          531 t
ORIGIN      
        1 acattgtatt ggattaataa ataacatttt agtagttttg tttaaaatat cataaatcca
       61 tacccaatag tattatgaag agattaatac ttgtacgtca cgggcaaagt gtttggaata
      121 aggaaaacag atttaccgga tggacagata tgccattatc tgaaaaagga gtagcagagg
      181 caataaaagc cggaaaaatt ctaaaagaaa atggttttaa ttttaaagtg gcgtttacat
      241 catatttaac aagggcaatt aaaacccagt ggcttattct cgaagaaatg gatttaatgt
      301 ggattgagga gagaaaaaca tggcggctta atgaaaagca ttatgggata ttgcagggtt
      361 tgaacaaaat tgagactgct gagaaatatg gtgccgatat ggtacaatta tggagacgaa
      421 gtttcgatac accaccaaat cctcttgatg ctgaggatga aagaaatcct aaattcgatt
      481 caaggtatgc agcattaact gctgatgaac ttccaatgac tgaatcacta aaagaagtaa
      541 ttgaaaggct aatcccttat tgggaatctg aaatcaagcc tgttctgcat gaaaataatg
      601 atctcctaat cactgcccat gggaatagtt tgcgggcatt ggttatgcat ctgaaaaata
      661 tgagtcgtga agaaatattg ggatttaata ttccaactgg tattccttat atctttgaac
      721 ttgatgacga tcttaatttt attaaagatt attttcttgg cgatcccgaa gaaataaaaa
      781 tacttatgga gcaggtagct aatcaggcaa agggaaaata aaacgaccgc taaaagtatt
      841 ttaaaattgt taaatctaaa atcgaaatga taaaaaagtg ggttattcct gatatacatg
      901 gttgtattga tacattaaaa actttaattg aaaatcagat taagccaaat aaaaatgatc
      961 atctgatttt tttaggtgat tatattgatc gtggtcctga tagcaaaggg gttctggatt
     1021 acattatgag aatgcaacaa aatgaatata acattacagc tttattggga aatcatgaag
     1081 attattgtat cagagcttat gatgatgact tgaaacacaa agggtttttg ggatttagac
     1141 ccaaaaggag aatccatcgt gaatgggata attatggtgg aattgaagca cttgaaagtt
     1201 ttgatataga ttcaccaaag gacattcctg ataaatatat taattggtta aaggcacttg
     1261 aatattatac tgaagttgac gattttatta ttgttcatgc cggacttaat tttaaggtag
     1321 atgatccttt tactgataaa catgctatga tatggataag agattttcaa gttgattcag
     1381 ccaaaatctc aaacaaaaag attattcatg gacatgtgcc tgtaaacctt gaatttatag
     1441 aactttcgtt aaataattcg gaatataaat ttatagatct tgataacgga atatatataa
     1501 atgaccgtgc aggatatggt aatttagtag cacttgaact taccgatatg agatatgttg
     1561 tacagtcgtt gatggatgaa gttacatatc ggaaataaaa atatttgcta tatattttct
     1621 taaacttaaa tgagcaaaca agaagtaacc ggaattatac tagctggcgg ggcaagtagc
     1681 cggatgggaa aagataaggg attatgtgaa tttcaaggga aagctcttat t
//
LOCUS       DASCQP010000288         1504 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001079546, whole genome shotgun sequence.
ACCESSION   DASCQP010000288 DASCQP010000000
VERSION     DASCQP010000288.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1504)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1504)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1504
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001079546"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..665
                     /locus_tag="QF480_04865"
     CDS             <1..665
                     /locus_tag="QF480_04865"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN05924.1"
                     /translation="SPVVSSWQTTTYTIEVDDTFKIVIAEITIVVNHMPVVDLIPPDV
                     TIWAEDTIKVCVRDSVLLDAGDPLNPPLMNYLWSNAATSQTVIGSTNGNWVAFETYWV
                     SAENPVTYCMGRDTLIVFFDFEECSIGVEENNNLSNFISVIPNPATDNAQITVKGLTG
                     NISISFSDIQGKIIWQKNDLTISNGLLEEKFSLKQLPKGIYVVNVVHKLGVYNTKLIK
                     QY"
     gene            712..>1504
                     /locus_tag="QF480_04870"
     CDS             712..>1504
                     /locus_tag="QF480_04870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05925.1"
                     /translation="MKTKYCLLQLTYFIVAFLISSPYLFAQENNCNYKKPHQADQWIF
                     GKKARVDFTQYPLIVSPTNINYNTPYGVSSISDESGNLLFFSNGLNVWNQGLFKMDNG
                     SGLNGNNFASQSSIIIPNPGNSKQYFIFTTDMFISPIYVDGVNYSVVDFTNSGYGTVT
                     SKNNLLFNENSQKISAVKHENGSNYWVIFHGFGPGKGKNFYSYLIDTTGVVTTPVVSE
                     TGTIHTGDVNNQRGYMKASSDGTKIGLVLPADGIIEILDFDKATGV"
BASE COUNT          509 a          235 c          265 g          495 t
ORIGIN      
        1 aatctcctgt tgtcagttca tggcaaacaa ctacctacac aattgaagta gatgatacat
       61 ttaaaatagt aattgcagaa ataacaatcg ttgttaatca tatgcctgtt gttgatttaa
      121 ttccacctga cgttacaatt tgggcagaag atactattaa ggtttgtgtt agagattcag
      181 tactactgga tgcaggagac ccgcttaatc ctcctttaat gaattatctt tggtcaaatg
      241 cagctacttc acaaacagtt atcggttcaa caaatggaaa ctgggtggct ttcgagacat
      301 actgggtatc tgctgaaaat cctgtaactt attgtatggg aagagatact cttattgtat
      361 ttttcgattt tgaagaatgc agtattggtg tggaagaaaa taacaattta tctaatttta
      421 tatccgtcat tccaaaccct gcaacagata atgcgcagat aaccgtaaag ggtttaacag
      481 gaaatataag tatttcattt tctgatattc agggaaaaat aatttggcag aaaaatgact
      541 tgactatttc aaacggatta ttagaagaaa aattctcgtt aaaacaactt cctaaaggaa
      601 tatacgttgt taatgttgtg cataaacttg gcgtttataa taccaaactt attaaacaat
      661 attagtttgt ttttgtaaaa aaatattgat caattataca gaaattaccg aatgaaaact
      721 aaatactgct tactacagtt aacatatttt attgttgctt ttcttatttc ttcaccttat
      781 ttgtttgcac aggaaaataa ttgtaattat aaaaaaccac atcaggccga ccaatggata
      841 tttggaaaga aggcaagagt tgatttcaca cagtaccctc tgattgtatc tccaacaaac
      901 attaattaca acactccata tggtgtatcc tcaatttctg atgaaagtgg aaatttgttg
      961 ttcttctcga atggcttaaa tgtctggaat caaggtttat ttaaaatgga caatggaagc
     1021 ggccttaacg gtaataattt tgcaagtcag tcgtcaataa ttattccaaa tcctggaaat
     1081 agtaaacagt attttatttt tacaaccgac atgtttataa gtccaatata tgttgacggt
     1141 gttaactatt ctgttgttga ttttacaaat agtggatatg gtactgtaac tagcaagaat
     1201 aatctactat ttaatgaaaa ttcccagaaa ataagcgccg ttaaacatga aaatggaagt
     1261 aattattggg ttatttttca tggctttgga ccaggcaaag gaaaaaattt ctattcatac
     1321 cttattgaca caaccggtgt tgtgactaca cctgtggtaa gtgagacagg aactattcac
     1381 acaggtgatg ttaataatca gcgtggttac atgaaagctt cctcagatgg caccaaaata
     1441 ggacttgtac ttcctgctga tggtattatt gaaatccttg attttgataa ggcaacaggc
     1501 gtat
//
LOCUS       DASCQP010000289         2691 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001081774, whole genome shotgun sequence.
ACCESSION   DASCQP010000289 DASCQP010000000
VERSION     DASCQP010000289.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2691)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2691)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2691
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001081774"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1139
                     /locus_tag="QF480_04875"
     CDS             <1..1139
                     /locus_tag="QF480_04875"
                     /inference="COORDINATES: protein motif:HMM:NF024116.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HJN05926.1"
                     /translation="LSVGTIALIVVLSVFNGFEDVIKSLYFTFNADLQITAQQGKTFN
                     YSKFPYEKIIDIQGVSGVSQVVEEDALFKYMDKQHIARIKGVSDNFIELSRIDTMIVN
                     GSFILQEGKSEFAVVGSGIAWYLDVYPQNISNLLSIYVPRRGNASSFNFENAFNSRAV
                     HPSGVFSIQQEFDEKYVFVPMHFARELLEYTDEVTSVEIRYKPGVDEDKMQSNVQSIL
                     GNDYVVKNRFQQNDALFKILRSEKTAIFLILIFILILSSFNMIGSLSILIIEKNKDIG
                     ILASMGADLKLIKTIFFTEGMLISFISSIIGLVIGFAILFIQENYGLLQLSGGDGAFV
                     ISAYPVKMHLLDFISVFGTVMVIGIFATIYPVMYLTKESSTIKK"
     gene            1224..>2691
                     /locus_tag="QF480_04880"
     CDS             1224..>2691
                     /locus_tag="QF480_04880"
                     /inference="COORDINATES: protein motif:HMM:NF013524.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008234 - cysteine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C25 family cysteine peptidase"
                     /protein_id="HJN05927.1"
                     /translation="MKRFLSLVLMIAAFLSLNATDWIELKNEGQASENIKLVSSDVNT
                     SMVHFSMNGFWKNDVETSRGTAWLISAENSGSNLKLGAPNLPVFATSLIIPNQANMQM
                     KIVSSQYEEFQDVLIAPSKGNLVRTVDPSSIPYEFGKQYSVDLYYPGEVGNLREPYIV
                     RDFRAQTVLIYPMQYNPISKTLRVYYDITVEITESGTSTINTLPSDYQIDQVESTFHN
                     IYSRQLLNYNLTSRYDPVGEVGNMLIISHGDFMDEVQPLIDWKIKTGTPVEIVDVATI
                     GGASDIKQYIANYFTDNGLTFVLLVGDAPQVPTSNAGGWDSDVDYSYVAGNDHYPDLF
                     VGRFSAETEAQVVTQVTRVLDYEQNPITDTAWYSKAVGIASDQGPGDDNEYDYVHIRN
                     IGDNKLIPFTYNYAYEFFDGSQGGNDADNNPTSTMVGDAINSGATIINYTGHGSQVSW
                     STSGFSNSNVNSLTNNGKLPFIFSVACVNGNFVAGTCFA"
BASE COUNT          881 a          401 c          506 g          903 t
ORIGIN      
        1 gattatcagt tggcacaata gcacttattg ttgtactatc tgtttttaat ggctttgaag
       61 atgtgataaa gtcgctttat ttcactttca atgcggactt acaaattact gcccaacaag
      121 gtaaaacctt taactattcc aaattccctt atgaaaaaat tattgatata cagggagtta
      181 gtggagtatc tcaagtagta gaagaagatg ctttattcaa atatatggat aaacaacata
      241 ttgcaaggat aaagggagtt tctgataatt ttatcgaatt atccagaata gatacaatga
      301 ttgttaacgg gtcttttatt cttcaagaag gaaaatcgga attcgctgtt gttggttctg
      361 gtatagcatg gtatctagat gtctatccac aaaatatttc aaatttgcta tctatttatg
      421 tgcctcggcg aggaaatgct tcttccttta attttgaaaa tgcctttaac agtagagcag
      481 ttcatccgtc aggtgttttc tcaatacaac aagaatttga tgaaaaatat gtttttgttc
      541 caatgcactt tgctcgtgaa ttacttgaat atactgatga ggttaccagc gttgaaataa
      601 gatataaacc aggggttgat gaagataaaa tgcaaagtaa tgttcagtca attttaggaa
      661 atgattatgt tgttaaaaac cggtttcaac aaaatgatgc tctatttaag attttacggt
      721 ctgaaaaaac agctatattc ctgattctga tttttatact tattctgtca tcttttaata
      781 tgattgggtc actttcaatt ctgatcatag aaaaaaataa agatattgga atattggcaa
      841 gtatgggtgc cgatttgaaa cttattaaaa caatattctt tacagaagga atgttaataa
      901 gtttcataag cagtattatt ggcttagtaa ttgggtttgc aattttattc attcaagaaa
      961 attatggact actgcagctt agtggaggtg atggtgcttt tgtaatttca gcctatccgg
     1021 tgaaaatgca cttattagat tttatatctg tatttggtac tgtcatggta attggtattt
     1081 ttgctactat atatcctgta atgtatctta cgaaagaaag ctcgacaata aaaaaatgaa
     1141 aactaaaaaa gttctagtgt cagcaaactt catcttaact tattgtgtca catatattaa
     1201 acattatctt aaaaataaac caaatgaaaa gatttttatc tttagtatta atgattgcgg
     1261 cttttttaag tttaaacgca actgattgga ttgaattaaa aaacgaagga caggcatctg
     1321 aaaatattaa acttgtatcg tcagatgtta acacctcgat ggttcatttt tcaatgaacg
     1381 ggttttggaa aaatgatgta gaaacaagca ggggaacggc atggctaatc tctgctgaga
     1441 atagtggctc aaatttaaag cttggtgctc ccaatttgcc agtttttgca acatcactta
     1501 ttattcctaa tcaggcaaat atgcagatga aaattgtgtc atcgcaatat gaagaatttc
     1561 aagatgtgtt aattgcaccc tcaaaaggga atttggtacg cactgttgat ccttcaagta
     1621 ttccatatga atttggcaag caatactcag ttgatttata ttatccaggt gaagtaggaa
     1681 atttgagaga accttatata gtaagagact ttcgtgcaca aacagttctg atttacccga
     1741 tgcaatataa tcctatatca aaaactttaa gagtttatta tgatattact gttgagatta
     1801 ccgaaagcgg aacttctaca ataaatacat tgccttctga ttatcagatc gatcaagttg
     1861 aaagcacatt tcataatatt tattctcgtc aactgttaaa ctacaattta acctctcgtt
     1921 atgatcctgt tggtgaagta ggaaatatgt tgattatctc acacggtgat tttatggacg
     1981 aagtacaacc tcttattgat tggaaaataa agacaggaac tcctgttgag attgttgatg
     2041 tagcaacaat tggtggggcg tctgatatta aacaatacat tgccaattac tttactgaca
     2101 atgggcttac ttttgttcta ctggttggtg atgcacctca agttcctaca agtaatgcag
     2161 gaggttggga ttcagatgtg gattattctt atgttgcagg taacgatcat tatcctgatt
     2221 tatttgttgg aagattttca gcagaaacag aagctcaagt tgtaacacag gtgacaagag
     2281 tattggatta cgaacaaaac ccaataacag acactgcctg gtattcaaaa gctgtgggta
     2341 tagcatctga tcaaggtcct ggtgatgata atgaatatga ctatgttcac atcagaaata
     2401 ttggtgataa caagttaatt ccttttacat ataattatgc ttatgaattt tttgatggta
     2461 gccaaggagg taatgatgct gataacaacc ctacttcaac aatggtaggt gatgctatta
     2521 attcaggagc aacgattata aactatacag gtcatggcag ccaggtttct tggagtactt
     2581 cagggttttc aaacagcaat gttaatagcc tgactaataa tggaaaacta ccttttattt
     2641 tttcagtggc atgcgtaaac ggaaactttg tagcaggaac atgtttcgcc g
//
LOCUS       DASCQP010000290         1708 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001086998, whole genome shotgun sequence.
ACCESSION   DASCQP010000290 DASCQP010000000
VERSION     DASCQP010000290.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1708)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1708)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1708
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001086998"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..309)
                     /locus_tag="QF480_04885"
     CDS             complement(<1..309)
                     /locus_tag="QF480_04885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05928.1"
                     /translation="MIQKKFLIVGVTIAALIMGVSISVFALNNTNSTTVVSMLPNAPE
                     YACSDGQPASECAQLKLTCGNGIIDPGEDCQNCAFDSGCPSGLVCGNISGSNDYVCHY
                     P"
     gene            complement(324..560)
                     /locus_tag="QF480_04890"
     CDS             complement(324..560)
                     /locus_tag="QF480_04890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05929.1"
                     /translation="MDADVYGNWSLVQIVAGTPFLYSFVQYSGYLFSLSPDTNTINSI
                     IIGLSTYPNNYNLIAIYIAKPDRSFINKFNSINL"
     gene            complement(564..734)
                     /locus_tag="QF480_04895"
     CDS             complement(564..734)
                     /locus_tag="QF480_04895"
                     /inference="COORDINATES: protein motif:HMM:NF024959.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05930.1"
                     /translation="MKWSHFFDGIDLSVGITVSGDLIYQHTPDGSLHIFNAETGSPVL
                     TKSFGNPAILYP"
     gene            complement(834..1460)
                     /locus_tag="QF480_04900"
     CDS             complement(834..1460)
                     /locus_tag="QF480_04900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05931.1"
                     /translation="MILLFSLLPVFTLPASGFSGKWTRSFDTYDGKSTYTLVLDSPDE
                     VTRNTNLTITTSLLLDHMDKYKQYFFYSTIELTIETDTGSSIKRTISFGGYPIGEQPE
                     RLYPGSRWGPNTFTIDLSNETINIPFGGAVDATIYARVNIAEFVNNPFLVEQLPSTTY
                     ESFSVTAGTFRIINESNFMSDYFPYIIGLTVGITIFIGLVFRNQRSSN"
     gene            complement(1505..>1708)
                     /locus_tag="QF480_04905"
     CDS             complement(1505..>1708)
                     /locus_tag="QF480_04905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05932.1"
                     /translation="NLDYLKVIKDIMAESHVATLISFPAWPQIRLILSRSLSQCWSST
                     LTPREAIKQIQEEIDKVGPVFKF"
BASE COUNT          543 a          299 c          319 g          547 t
ORIGIN      
        1 cggatagtga cagacatagt cattgctacc actaatatta ccacaaacaa ggcctgaagg
       61 acagccacta tcaaaagcac aattctgaca gtcttctcct ggatcaatta tgccgttacc
      121 acacgtaagt tttagttgag cacactctga agcaggttga ccatcggaac aagcgtattc
      181 aggagcgttt ggtaacattg ataccactgt tgtactattt gtgttattta gtgcaaatac
      241 tgaaatactt actcccatta ttagggctgc gatagttact ccaacaatta agaacttttt
      301 ttggatcatt ctaagaactc cttctataaa ttaatagagt tgaacttatt aataaaactt
      361 ctgtcaggtt ttgcaatata aatagctata agattgtagt tatttggata tgtggatagt
      421 ccaataatta tactatttat tgtgtttgta tccggagata atgagaacaa gtatccagaa
      481 tattgtacaa atgagtataa gaatggcgtt ccagcaacta tctgaacaag agaccaatta
      541 ccatatacgt cagcatccat aatctaggga taaagaatag cgggattacc gaaagatttg
      601 gttaacactg gagaacctgt ttcagcatta aaaatatgta gagaaccatc gggcgtatgt
      661 tgatagatta gatctccact gacggttatt cctacactta aatcaattcc atcgaagaaa
      721 tgactccact tcacatcgtc agtggattca tcaatagcat atagagaaga actcgtagga
      781 ccgacatttt cagagttgtt ttatgtcaac tatacctata ccacctattt tttttaattg
      841 gagctacgtt gattacgaaa aactagtcca atgaatatcg ttatgcccac tgtcaagcca
      901 ataatatatg gaaaatagtc agacataaaa tttgattcat ttataattct aaatgtgcct
      961 gcagtaactg agaaagattc atatgtcgtg gaaggcagtt gctcaacaag aaagggatta
     1021 tttacgaatt ctgcaatatt cacccttgca taaatggtag catctactgc tcctccaaaa
     1081 ggaatattga tagtttcgtt tgatagatct atagtgaatg tgtttggtcc ccagcggcta
     1141 ccagggtata atcgttcagg ttgttctccg atggggtaac caccaaatga tattgttcgt
     1201 tttattgatg aaccagtatc tgtttctata gttagctcta ttgttgaata gaagaaatat
     1261 tgtttgtatt tatccatatg atctagaagg agtgacgtag ttatggttaa gttcgtattt
     1321 ctggtcactt cgtcagggct atctaaaaca agggtgtacg tgctttttcc atcataggtg
     1381 tcaaaagatc ttgtccattt gccactgaaa ccgcttgcag gtagtgtaaa tactggtaat
     1441 aatgagaata acaaaatcat tgaaaaaaga attgagaagt agtgtttcaa ttttttttac
     1501 tcacctagaa tttgaagacg ggtcccactt tatctatctc ttcttgtatt tgctttatag
     1561 cctcacgtgg ggttaatgtt gaactccagc attgtgaaag acttctactt aaaataagtc
     1621 taatttgagg ccaggctgga aaagatatta gagttgcaac atggctctct gccataatat
     1681 ccttaatcac cttaagataa tctagatt
//
LOCUS       DASCQP010000291         3561 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001108468, whole genome shotgun sequence.
ACCESSION   DASCQP010000291 DASCQP010000000
VERSION     DASCQP010000291.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3561)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3561)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3561
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001108468"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..618)
                     /locus_tag="QF480_04910"
     CDS             complement(<1..618)
                     /locus_tag="QF480_04910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006841668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HJN05933.1"
                     /translation="MDLKLISDFKPTGDQPEAISQLVDGLVRNDRAQTLLGVTGSGKT
                     FTIANVLEKVQRPALILSHNKTLAAQLYGEFKQFFPENSVEYFVSYYDYYQPEAYIPV
                     TNTYIEKDLSINEEIEKMRLSTTSALLSGKRDVIVVSSVSCIYGIGNPDDFTNNVITL
                     VVGQKLSLNKLLRELVSALYSRNEIELKRGNFRVKGDIIDIFPGYM"
     gene            789..2267
                     /gene="glpK"
                     /locus_tag="QF480_04915"
     CDS             789..2267
                     /gene="glpK"
                     /locus_tag="QF480_04915"
                     /EC_number="2.7.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006842692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004370 - glycerol kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006071 - glycerol metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol kinase GlpK"
                     /protein_id="HJN05934.1"
                     /translation="MKEKYILSLDQGTTSSRAIIFNHKGDVCAIAQKEIEQIFPIPGW
                     VEHNPIEIWSTQLAVASEAIAKLGIHANEIAGIGIANQRETTIIWSRKTGKPIYNAIV
                     WQDHRTAEVCDELIKNGYDKIVKQKTGLELDAYFSATKISWILDNVQGARLHAEKGEL
                     AFGTVDSWLIWNLTDGGAHLTDVSNASRTMLFNIHKLEWDEELLSLFNVPRQILPDVK
                     PNSHVFAHTAGKLLSSRIPICGVAGDQQAAMFGQLCLKKGMAKNTYGTGCFLMLNTGE
                     EAVVSRNRLLTTIAWQLNNKVTYALEGSVFVAGAVIQWLRDQLSIINSSEQVEALAGK
                     VDDNGEVYFVPAFTGLGAPYWNQHAKGLIYGLTRGTTKAHIARAALESIAYQNYDVIK
                     AMEKDIGTKVNYIRADGGASANSMLMQFQSDILGIIVERPKILETTALGAAYFAGLAI
                     GYWENTDQLISQWSIDRAFTPLMHKEKVVHLIKNWHEAIRKA"
     gene            2333..2575
                     /locus_tag="QF480_04920"
     CDS             2333..2575
                     /locus_tag="QF480_04920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05935.1"
                     /translation="MKKLAPLFFILLVLSSYSQEQKNYQNLSANAEDYDFHSQVDIGL
                     GIGINYGGLLGAQVQYVPTKHFAIMGSAGYYIAGFG"
     gene            2600..2908
                     /locus_tag="QF480_04925"
     CDS             2600..2908
                     /locus_tag="QF480_04925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05936.1"
                     /translation="MPKVPSKPFRVYGTVMYGTNAAIIVIGNSHHHNTFIGPSVGGGI
                     EMRFGREKRKGLNIDLFVPFRSDEYNTAVNNVKNDPSISDFTEPLPFTISVGYHFEIK
                     "
     gene            3085..>3561
                     /locus_tag="QF480_04930"
     CDS             3085..>3561
                     /locus_tag="QF480_04930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018336362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HJN05937.1"
                     /translation="MQDKVVIITGASSGIGKALAYEFAHHGSKVVLGARNFSTLTEIV
                     EDIKKSGGDVVCAQTDVSNEVDCKNLILTAIDHFGKIDVLINNAGISMRALFENTELE
                     VIRKLMDVNFWGTVYCTKYALPHLLAQKGSVVGVSSIAGLKGLPARSGYSASKFAMN"
BASE COUNT         1189 a          572 c          690 g         1110 t
ORIGIN      
        1 catataaccg ggaaaaatat cgataatatc acctttcact ctgaagtttc cccgcttcaa
       61 ttctatttca tttcttgaat acaatgcact tacaagttcc cgcaatagtt tatttagact
      121 aagcttctgt ccaacaacaa gtgtaataac attatttgta aaatcatcag gattgccaat
      181 tccatatatg catgacacgg aggaaactac gataacatct cgtttgcccg aaagcagggc
      241 agaggtagta cttaacctca tcttttctat ttcctcatta atacttaaat ctttttctat
      301 gtatgtatta gttacgggaa tgtaagcttc gggttgataa tagtcgtaat aggaaacaaa
      361 atactcaaca gaattctcag gaaagaactg tttgaattcg ccatataatt gagcagcaag
      421 tgttttatta tgactaagaa taagagcagg gcgttgaacc ttttcaagaa cattggcaat
      481 tgtaaaagtt tttccggatc cagtaacacc tagcaaagtt tgggctctat cgttacgaac
      541 taggccatca accaactgcg atatggcttc aggttggtca ccagtaggtt taaaatctga
      601 tatgagttta aggtccattc cttcttgtta atcctgcgat acttacaatt aatgttggca
      661 aaaatacaaa tcacttgata tactttgcta taatcctaac gatataacat caccattaca
      721 ataattatca attatcaagc catgtttgaa gattttttat ctttgacttt gtagaaccaa
      781 ttaaacagat gaaagaaaaa tacatcttgt ctttagatca aggtacaaca agtagccgag
      841 ctattatttt caatcataaa ggagatgttt gtgctattgc tcaaaaagag atagaacaaa
      901 ttttcccgat tcccggatgg gtagaacaca atccaattga aatatggtca actcaactag
      961 ctgttgcttc tgaagctata gcaaaattag gaattcatgc aaatgaaatt gcaggcattg
     1021 gaattgcaaa tcagcgtgaa acaaccatta tttggtcaag aaaaacaggt aaaccaattt
     1081 ataatgcaat tgtgtggcaa gatcatcgaa ctgcagaagt ttgtgatgag ctcattaaga
     1141 atggttatga taaaattgta aaacaaaaaa caggacttga gttggatgca tatttctcgg
     1201 caacaaaaat aagttggata cttgataatg tacaaggggc aaggttgcat gctgaaaagg
     1261 gtgaattagc atttggtaca gtagattcct ggctaatttg gaacctgact gatggcggtg
     1321 cacatttaac agatgttagc aatgcatcca gaacaatgtt atttaacatt cataaacttg
     1381 aatgggatga agaactgctt tcattgttta acgtaccacg acaaattctc cctgatgtta
     1441 aaccaaatag tcatgttttt gctcatacag ctggaaaact tttaagttca cgaatcccaa
     1501 tttgtggcgt tgcaggagat cagcaagcgg caatgttcgg acaattgtgt cttaaaaaag
     1561 gaatggctaa aaacacctat ggtacaggat gttttttaat gcttaataca ggagaggagg
     1621 cagtagtttc cagaaataga cttttaacta ccatagcatg gcaattaaat aacaaggtta
     1681 cgtatgcgtt agagggaagt gtttttgttg ccggtgctgt tatacagtgg cttcgtgacc
     1741 aattatctat tattaattca tctgagcagg tggaagcact tgctggtaag gtagacgata
     1801 atggtgaggt atattttgtt ccagccttta ccggacttgg cgccccatac tggaatcaac
     1861 atgctaaagg attaatttac ggtttaacaa ggggtacgac caaagctcat atcgccaggg
     1921 cagcactcga atcaatagca tatcaaaatt atgatgtaat taaggcgatg gaaaaagata
     1981 taggtacaaa agttaattat atcagagccg atggaggggc atctgcaaat tcaatgctaa
     2041 tgcaatttca atctgacata ttaggaataa ttgtagaacg acctaaaata ctagagacaa
     2101 cagctcttgg tgctgcttat tttgccggat tagcaattgg atattgggaa aatacagacc
     2161 agttaattag tcaatggtct attgacagag cctttactcc attgatgcat aaagaaaaag
     2221 tagttcatct tattaaaaat tggcatgagg caattagaaa agcttaagat gtatatgact
     2281 tgtaataatt cttaaatttg tttttttttt aacctaattc aaaataaata ttatgaaaaa
     2341 gcttgcccca ttatttttta tattactggt tttaagttca tattcacaag aacaaaaaaa
     2401 ttaccagaat ctatcagcta atgcagaaga ttatgatttt cactctcagg ttgatattgg
     2461 actgggaata gggattaatt acggaggtct attaggtgct caagtacagt atgtgcccac
     2521 taaacatttt gctataatgg gctcggctgg ttattatata gccggattcg ggtgacaggt
     2581 tggtgcaata gggtacatca tgccaaaagt accttcaaaa ccatttagag tatatggtac
     2641 ggtaatgtat ggaacaaatg cagcaatcat tgtaataggt aattctcatc atcacaatac
     2701 ttttattggc cctagtgtag gaggaggaat agaaatgcgt tttggtcgtg aaaaacgaaa
     2761 aggtctcaac attgatttat ttgtcccgtt tagatccgat gagtataaca cggctgtaaa
     2821 caatgtaaaa aacgacccct caatttctga ttttactgaa cctttgccat ttacaatatc
     2881 tgttggttat cattttgaga taaaataatt actaaattcc gtttttcgct gttcataatt
     2941 gtgattctgc tatataatat ctagaaatac tgtccagtta taccctttac gataattaat
     3001 cttttctgta aaagtattat taatatttat tgaaaaaggt atggtttaat tagaataatt
     3061 attataattg taaaaaaaat ataggtgcaa gataaggtag ttataataac tggagcatca
     3121 tccggaattg gcaaagcatt ggcttatgaa tttgcacatc atggttctaa agttgtactg
     3181 ggagcacgca attttagcac tctaaccgaa attgtagaag atatcaagaa atctggtggt
     3241 gatgtagttt gcgctcaaac tgatgtaagc aatgaagtcg attgtaaaaa ccttattctt
     3301 accgctattg atcactttgg taaaattgat gtattgatta acaatgctgg catatccatg
     3361 agagcactgt ttgagaatac tgagttagag gttataagaa aattaatgga tgtcaatttt
     3421 tggggtaccg tctattgtac taagtatgcg ttaccacatt tattagcaca aaagggaagt
     3481 gtggttggcg tatcatcaat tgcaggttta aaggggttgc cagcacgatc cggatattca
     3541 gcctcaaaat ttgcaatgaa t
//
LOCUS       DASCQP010000292         3591 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001108499, whole genome shotgun sequence.
ACCESSION   DASCQP010000292 DASCQP010000000
VERSION     DASCQP010000292.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3591)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3591)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3591
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001108499"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            305..1105
                     /locus_tag="QF480_04935"
     CDS             305..1105
                     /locus_tag="QF480_04935"
                     /inference="COORDINATES: protein motif:HMM:NF018305.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HJN05938.1"
                     /translation="MKNLNTITSSTNFRILSHIMFWVGYLLFFYLQFNLYSEQFSSIG
                     TLGSLTLTAIVDILAAYFTVYYLLPQFLFKKKYVLFAIIFLVSATLAILFQRVILYYV
                     TLPLFYPDSASSWKSFWYINPFYSFINIYTVVSVFAAIKLMKYWYRNQQLKIELENKN
                     KTSELALLRTQLNPHFLFNTLNNIDTLISTNQEKASDAVIKLSEIMRFMLYEANSDRV
                     PLEKEINYLESYISLQQLRLKNPFFVNFKNDINCKGVVDCPNAVYSFC"
     gene            1068..1364
                     /locus_tag="QF480_04940"
     CDS             1068..1364
                     /locus_tag="QF480_04940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05939.1"
                     /translation="MSIAPMLFIPFVENAFKHGLKNIVTPGIDITLNCDNGIIHFEVV
                     NRYSELDEQNKDATSGIGLINTQKRLELLYQNKHKLEISENDGIFKVSLKIFST"
     gene            1391..2122
                     /locus_tag="QF480_04945"
     CDS             1391..2122
                     /locus_tag="QF480_04945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008762451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LytTR family DNA-binding domain-containing
                     protein"
                     /protein_id="HJN05940.1"
                     /translation="MKINCIAIDDEPLALQKMHDFILRVGYLELLAEFDNALDALEFL
                     KSNTVDLIFLDIQMEDLTGVQMLEAMTDKPKVIFTTAYDEYAIKGYELDVSDYLLKPI
                     SFSRFLQSCEKVHNALNPEKENEYQPVIKSDSNPTDEFFFIKNGNITQKVDFDNILFV
                     EGMKDYLRIHTIDEKIMTLLSFKKLEQSLTYPQFVRIHKSYLIAVDKIKSIERNRVTI
                     GDQILPIGESYRRQFFDVVDKKRLL"
     gene            complement(2132..>3591)
                     /locus_tag="QF480_04950"
     CDS             complement(2132..>3591)
                     /locus_tag="QF480_04950"
                     /inference="COORDINATES: protein motif:HMM:NF040138.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PKD domain-containing protein"
                     /protein_id="HJN05941.1"
                     /translation="DLPNVIVTELEIQFDSQLIRAGTYGRGLWETSIELYAPTANFEA
                     DQTTIPTGCENSFTSLSQGPPDTYEWTFEGAVPATSNEKDPTNILYDIEGTYDVQLIV
                     TNSLGVDTLLVEDYITVSSTLLPATNFTTSDSVTCSNQKVEFIDQTLYCPDSWEWDFE
                     PKSIGYVGGTNANSQNPKVIFETGVYSVTLTTTNAVGSNTITKTDYIHSGGAALPFIE
                     SFEVENIMESGWTIENPDELITWEGINVVGTTPGDKGVWVNNIDYPHFGERDRLISPA
                     MDFSGFTDLVLAFDYAYAQRYFQKDSLIVYISDDCGENWTRVFANGPDGTGVFATSPT
                     TPDSFVPQSSEDWCGEGWGSSCNLIDLSSWDGSANVKIMFESYCHYGNNLYLDNILIS
                     NNVNVSEIHKGNHQINIVPNPSSGKFTISVKDVSGIIKMNIVNTQGQPILSETFINKG
                     GTFANQIDLSNHSKGIYFVMIRTDEGTEVRKIVIN"
BASE COUNT         1147 a          609 c          575 g         1260 t
ORIGIN      
        1 acgagtagtt tcctgatttt tactccatgt cacattatta ctgccataat aatgttcaat
       61 tatatgtttc tcgtaattca ataaattcat tagagaatta attcgttgca atattgttgt
      121 aatcctttct cctgtacaaa taaaatatac atcaatccca aatgaataga tatatagctt
      181 ggtattataa ctgaatccgt tacatcgata taatttcaat atttagtagc ttactggtag
      241 tgtttgtcga ttattggtat aagcatgtga ttattataca attatagttt acatttgcgt
      301 gcatatgaag aatttgaata caattacatc aagtactaat ttcaggatat tgtcacatat
      361 tatgttctgg gtggggtacc ttttgttttt ctatctacag tttaatttat atagcgaaca
      421 atttagttca ataggtacat taggcagtct tactttaact gctattgtgg atatattagc
      481 ggcttatttt acagtatatt atttattgcc tcaatttcta tttaaaaaga aatatgtctt
      541 gtttgccatc atttttttgg tatcagcaac tttagcaatt ttgttccaga gggtaatttt
      601 gtactacgta actcttcctt tattttatcc tgattctgca agttcatgga agtccttttg
      661 gtatattaat cctttttatt cattcataaa tatttatacc gttgttagtg tatttgctgc
      721 aattaaatta atgaaatatt ggtacagaaa tcagcaacta aaaatagaac tagagaacaa
      781 gaataaaaca agtgaattag ctttgcttcg cacccagtta aatcctcatt ttctttttaa
      841 cacattaaac aatattgaca cactcattag tacaaatcag gaaaaagcct ctgatgctgt
      901 tataaaatta tctgaaataa tgcgtttcat gttatatgag gcaaatagtg atagggttcc
      961 acttgaaaag gaaattaatt accttgaaag ttatatttcg ttacagcaat tgagattaaa
     1021 aaacccattt tttgtaaatt tcaaaaatga tattaattgt aagggggttg tcgattgccc
     1081 caatgctgtt tattcctttt gttgagaatg ccttcaaaca tggtttgaaa aatattgtta
     1141 ctcctggcat tgacattact ctaaactgtg ataacgggat tattcatttt gaggttgtta
     1201 acagatatag cgaacttgat gagcagaata aggatgctac atcaggcatc ggattgatta
     1261 acacccaaaa gaggttagaa ctattatacc aaaataagca caagcttgaa atatcagaga
     1321 atgacggaat atttaaagtg agcttgaaaa ttttctcaac ttaaattttt atatttgttt
     1381 tatttgaatt atgaaaatca attgcattgc catagatgac gaacctcttg cattacaaaa
     1441 gatgcatgat tttatcttaa gggtaggtta tctggaattg ttggctgagt ttgataatgc
     1501 acttgatgcg cttgaatttt taaaatccaa tactgttgat ctgatatttc tcgatattca
     1561 gatggaagac cttaccggtg ttcaaatgct tgaggcaatg actgataagc cgaaagttat
     1621 ctttactact gcttatgatg agtatgctat taagggttat gagcttgatg tttccgatta
     1681 tttgctaaag ccaatatctt tttcaagatt tttacaatcg tgtgagaaag tccataatgc
     1741 attaaatccg gagaaagaaa acgaatacca gccagtaatt aaaagtgata gtaatcctac
     1801 tgacgaattt ttctttatta agaatggaaa cattactcaa aaggttgatt ttgacaatat
     1861 cttatttgtc gagggtatga aagattatct tagaattcac acaatcgacg aaaagataat
     1921 gacactacta agttttaaga aactggaaca atcacttacg tatcctcaat ttgtaagaat
     1981 acataaatcc tacttgatcg cagtagataa aattaagagt atcgaaagaa accgtgttac
     2041 tattggtgat caaatccttc ccattggaga gagttaccgt agacagtttt tcgacgtggt
     2101 tgataaaaag agattactat aatgttgtga attaattaat cactattttt cttacttctg
     2161 tcccttcatc cgttctaatc ataacaaagt aaatcccttt cgaatgattt gaaagatcaa
     2221 tttgatttgc aaaagttcct cctttattta taaaagtttc tgacaatatt ggttgtcctt
     2281 gagtgtttac tatgttcatt ttaataattc cactcacatc ctttacagaa atagtaaatt
     2341 tccctgatga cggatttgga acaatattaa tttgatgatt ccccttatga atttctgaaa
     2401 cgttaacatt gtttgaaata agaatgttgt cgagatacaa attgttccca taatgacagt
     2461 atgattcgaa catgatttta acgtttgcgg aaccgtccca acttgataaa tcaatcaaat
     2521 tacaactact tccccaacct tctccacacc agtcttcact actttgaggc acaaaagaat
     2581 caggtgttgt aggactagta gcaaaaactc cagttccatc gggcccgttt gcaaacactc
     2641 tggtccagtt ttcaccgcag tcatcactta tataaacaat caatgaatcc ttttgaaaat
     2701 atcgttgcgc ataagcgtaa tcaaatgcta atacaagatc agtaaagcct gaaaagtcca
     2761 ttgcggggct aattaatctg tctctttctc caaaatgtgg gtaatctata ttattcaccc
     2821 atactccctt gtctccaggt gttgttccaa caacatttat tccttcccaa gtaattaatt
     2881 catcagggtt ttcaattgtc caaccacttt ccataatatt ttcaacttca aaactttcta
     2941 taaatggtaa tgcagctcca cctgaatgaa tataatctgt tttagttatt gtattacttc
     3001 caacagcatt tgttgttgta agtgtaacag aataaactcc agtctcaaaa ataactttgg
     3061 gattctggga gttagcattt gtaccaccaa catagcctat tgatttaggc tcaaaatccc
     3121 attcccatga atcgggacaa taaagcgttt ggtcgatgaa ttcaactttc tggttactac
     3181 aagtaacaga atcacttgta gtaaaattcg ttgcgggaag caatgttgaa cttactgtta
     3241 tataatcttc tactaacaaa gtatcaacgc caaggctatt tgttacgatt aattgtacat
     3301 catatgtacc ttctatgtca tataatatat tcgtcggatc tttttcgttt gaagtggcag
     3361 gtactgcacc ttcaaaggtc cattcatatg tatcaggagg accttgcgat aaacttgtaa
     3421 aactattctc gcaaccggta ggtattgttg tttgatctgc ttcaaagtta gctgttgggg
     3481 cgtacaactc aatacttgtt tcccataatc ctctcccata tgttccggcc cgtatcaatt
     3541 gtgaatcaaa ctgtatttcc aattctgtta caatcacatt aggtagatcc t
//
LOCUS       DASCQP010000293         1746 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001110424, whole genome shotgun sequence.
ACCESSION   DASCQP010000293 DASCQP010000000
VERSION     DASCQP010000293.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1746)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1746)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1746
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001110424"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..222)
                     /locus_tag="QF480_04955"
     CDS             complement(<1..222)
                     /locus_tag="QF480_04955"
                     /inference="COORDINATES: protein motif:HMM:NF014408.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05942.1"
                     /translation="MNTGNFVNRHNGPSDSDVEYMLNSLGLNSVDQLIDQTIPVDIRL
                     KDELNIGEGLSEYEYLNHIRKLSQENKIFK"
     gene            complement(420..>1746)
                     /locus_tag="QF480_04960"
     CDS             complement(420..>1746)
                     /locus_tag="QF480_04960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013444168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004427 - inorganic diphosphate
                     phosphatase activity [Evidence IEA];
                     GO_function: GO:0009678 - diphosphate hydrolysis-driven
                     proton transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sodium/proton-translocating pyrophosphatase"
                     /protein_id="HJN05943.1"
                     /translation="SAGTLGAALIPEFTKIFTSPKSTHVDEVVEASKQGGASLNILSG
                     LVAGNFSAFWKGMVFFMLMFVAYYASTFGLDAFMIYPSIFAFGLVAFGMLGMGPVTIA
                     VDSYGPVTDNAQSIYELSLIEENQKEVTPEIEKDFGFTPDFEKSKYYLEANDGAGNTF
                     KATAKPVLIGTAVVGATTMIFALILVIKDTLGIEPEEILNLLNPYTIMGFLLGGAVIY
                     WFTGAAIQAVTTGAARAVEYIKHNINLDPNAPKKADVEKSKAVVKICTVYAQKGMWNI
                     FIAIFAFALAFAFLAAPVGLTSEMINNLGDPEIHKSVVELSLPVSLFIGYLLSIAFFG
                     LFQAIFMANAGGSWDNAKKVIEVDMGEKGTALHDASVVGDTVGDPYKDTSSVALNPVI
                     KFTTLFGLLAMEIAISEHFRDLAPYFGVGFLLVALYFVWRSFYKMRIKG"
BASE COUNT          587 a          349 c          261 g          549 t
ORIGIN      
        1 cttgaaaatc ttattttcct gagaaagctt tcggatatga ttcaaatatt cgtattcact
       61 caaaccttct cctatattca gttcatcctt taatcggata tcgactggaa tagtttggtc
      121 aattagctga tcaactgaat ttaatcccaa gctgtttaac atatattcta catcgctgtc
      181 agacggacca ttatgtcggt ttacaaagtt tcctgtattc attttgctat tttaatgcaa
      241 ttttttaaag atattttaag actagcttga aacaatcatt agcaatgcaa aattaaaaat
      301 cttatcaact aaacatcatt tttttagagg ttataaatca tgaaatactg atttattttt
      361 aaataaaaaa agggaagctg tcaaatcagc ttcccctata atttcatgag ttttacaaat
      421 tatcctttaa tcctcatttt atagaatgat ctccacacga aataaagtgc tactagtagg
      481 aatcctacac caaaataagg agctaaatct ctgaaatgtt cagaaattgc aatctccatc
      541 gccagtaatc caaacaatgt agtaaactta attacaggat taagtgctac tgatgatgta
      601 tccttatacg gatcacctac tgtgtcacca actacagatg catcatgaag tgcagttccc
      661 ttttcaccca tatcaacttc aataactttt ttggcattat cccatgaacc accagcatta
      721 gccataaata ttgcctgaaa taatccaaag aaagcaattg atagtaagta tcctataaaa
      781 agtgaaacgg gaagtgacaa ctctacaaca ctcttatgga tttcaggatc accaagatta
      841 tttatcatct cagaggtaag accaactggt gctgctaaaa acgcaaaagc cagagcgaag
      901 gcaaatattg caataaaaat attccacata cccttttgtg cataaacagt acaaatttta
      961 acaacagctt ttgatttttc aacatctgcc ttttttggag cattaggatc gagattgata
     1021 ttatgtttga tatattcaac cgcacgggca gcacctgttg taactgcctg aattgctgca
     1081 ccggtaaacc agtaaatcac agcacctcca agtaagaatc ccattatagt gtatgggttc
     1141 aataagttta gaatttcttc aggttcaata cctaaagtat cttttataac taaaatcaaa
     1201 gcaaaaatca tagttgttgc acctacgaca gcagtcccaa tcagtactgg ttttgccgtt
     1261 gccttaaaag tattacctgc accatcattt gcttctaggt aatattttga tttttcaaag
     1321 tcaggagtaa atccaaaatc tttttcaatt tcaggagtaa cttctttttg attctcttca
     1381 ataagtgaaa gttcgtatat tgattgtgca ttgtcagtta ccggtccata gctatcaact
     1441 gcaatagtta ccggacccat gcccaacatt ccaaatgcta caaggccaaa ggcaaaaatt
     1501 gaaggataaa tcataaatgc atccaaacca aaagtactgg cataatatgc aacaaacatt
     1561 aacataaaga ataccatacc tttccagaaa gcactaaagt tacctgctac caaacctgat
     1621 aatatgttca acgatgcccc accttgtttc gatgcttcta ctacttcatc aacatgtgtt
     1681 gatttaggac ttgtaaagat ttttgtgaat tcgggtatta atgctgcacc tagggttccg
     1741 gcactg
//
LOCUS       DASCQP010000294         2383 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001110577, whole genome shotgun sequence.
ACCESSION   DASCQP010000294 DASCQP010000000
VERSION     DASCQP010000294.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2383)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2383)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2383
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001110577"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1021
                     /locus_tag="QF480_04965"
     CDS             <1..1021
                     /locus_tag="QF480_04965"
                     /inference="COORDINATES: protein motif:HMM:NF024687.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TGS domain-containing protein"
                     /protein_id="HJN05944.1"
                     /translation="FVFTPAGEMVNMPAGATVLDFAYTIHTDIGDQCIGANINHRLVP
                     LGHKIQSGDQVEIITSKIQTPIEDWYKYVVTARAKTRIANAIKNTRKQFKKIGEEKLN
                     GYLKQLNIENTKHNIYLLLSGSKIKGHIDLYYFIAQDMIGFKEIKEIMQPHESRLNWI
                     KNIKLPFKKPKVVSVSENNEEESKTPESIDEKKYISDFNTLEYTVSECCNPLPGDSVL
                     GLIFPNEPIQIHLTDCDVGIRLMSQHGKNIVKAKWKQKAGITFLAGINIKATDNIGLI
                     QEIVTPITEEFNINIRSFDLKSSEGLVNMDITLYVSSTKNFKMLMTRLKKIKSIIKVT
                     RLDKI"
     gene            1091..1564
                     /locus_tag="QF480_04970"
     CDS             1091..1564
                     /locus_tag="QF480_04970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018109287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HJN05945.1"
                     /translation="MKLSTKKDTFEAVKKLFTEHLESRGHRKTPERYTILKEIYATEG
                     HFDIETLYIRMKNNKYRVSRATLYNTIELLLDCNLVTKHQFGNNCAQFERSFKFKQHD
                     HFVCIANGKVLEFCDPRIQEIQKSVEESLGVEVVYHSLTFYGKCDNQKQDDKKKS"
     gene            1710..>2383
                     /locus_tag="QF480_04975"
     CDS             1710..>2383
                     /locus_tag="QF480_04975"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005873852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004019 - adenylosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthetase"
                     /protein_id="HJN05946.1"
                     /translation="MKIDVLLGLQWGDEGKGKVVDVLTPQYDIIARFQGGPNAGHTIE
                     FDDKKFILHTIPSGIFNKRTINVIGNGVIIDPFILRKEISNLSKSGINVGENLLVSRK
                     AHLIMPTHRLLDAVYEKAKGENKIGSTLKGIGPCYTDKVSRNGIRVGDIEHSTFDKRY
                     KNARERHIRIIEQYDTDYEDITIDGIKFIEYENQWHDALKELNKLKKINSEYYLNKQL
                     DAGKKI"
BASE COUNT          910 a          351 c          422 g          700 t
ORIGIN      
        1 ttttgtattc actcctgccg gagaaatggt aaacatgcca gccggagcca ctgtacttga
       61 ctttgcatat acaatccata ccgatattgg agaccaatgt attggagcaa atattaacca
      121 tcgccttgta cctttagggc ataaaattca gtctggtgac caggttgaaa taattacatc
      181 caaaattcaa accccaattg aagattggta caaatatgtt gttactgctc gtgctaaaac
      241 acggattgct aacgccataa aaaacacaag aaaacaattc aagaaaatcg gagaagagaa
      301 acttaatggt tatcttaaac aactaaacat agaaaacacc aagcacaaca tatatttatt
      361 attatcaggc agtaaaataa aaggacacat tgatctttat tactttattg cacaagacat
      421 gataggcttt aaagaaataa aggaaataat gcagcctcat gaaagtcgat taaactggat
      481 aaagaatatt aaactgccat ttaaaaaacc aaaagttgtg tctgtttctg aaaataatga
      541 agaagaatcc aaaactcctg aaagtattga tgagaagaaa tatatttccg acttcaacac
      601 tctggagtat acggtttctg agtgttgcaa tcctttacct ggtgatagtg tcctgggatt
      661 gatatttcct aatgaaccaa tccaaataca tcttacagac tgcgacgttg gtattaggtt
      721 aatgtctcaa catggaaaga atattgtaaa agcaaagtgg aaacaaaaag caggtatcac
      781 atttcttgca ggaataaata ttaaagctac tgataatatt ggattaattc aagaaatagt
      841 aactcccata accgaagaat ttaatatcaa tattcgatcg tttgacctaa aaagtagtga
      901 agggttagta aatatggata ttacactgta tgtatcaagc actaagaatt tcaaaatgtt
      961 gatgacaaga ttaaaaaaga tcaaatcaat aataaaagta acaagattag ataaaattta
     1021 gttagtttaa ttatttatat tcatactaaa tagagaaaat ttattaattt tacggcaaaa
     1081 tatcaatagt ttgaaattaa gtactaagaa agatacattc gaggctgtaa aaaagctgtt
     1141 tacagaacat ttggaatcaa gggggcatag aaaaacacct gaacgctata caatattaaa
     1201 agaaatttat gccaccgaag gacattttga tatcgaaacc ctatatatta gaatgaagaa
     1261 taataaatat agggttagca gagccacact ttacaatact attgagcttc tgcttgactg
     1321 taatctcgtt accaagcatc aatttggaaa taattgtgca cagtttgaac gttcattcaa
     1381 atttaagcag cacgatcatt ttgtttgtat tgcaaacggt aaagtactag aattttgcga
     1441 tcccagaatt caggaaattc aaaagtcagt tgaagaatcg ttaggtgttg aggttgttta
     1501 ccattctctt acattctatg ggaaatgtga taaccaaaaa caagacgata aaaagaaaag
     1561 ttagtaattt ttgaaaacta ttcttttctt gcaatcacaa tttattaatt ttgtcactat
     1621 aattaaccct gttcattcag ggttttttaa tgttgatcga tatatttatg ataagagttt
     1681 gattattaaa ccgtaataat gtttacagta tgaaaattga tgttctgtta ggtttacagt
     1741 ggggagatga aggtaagggt aaagtagttg atgtattaac ccctcaatat gatataatag
     1801 cgcgctttca gggtgggcca aatgctggac atacaatcga atttgatgat aaaaagttca
     1861 ttctccacac gataccttcc ggaattttta acaaacgaac aataaatgta attgggaatg
     1921 gtgttattat cgaccctttc atactacgaa aagaaataag taatctttca aaaagtggaa
     1981 tcaatgttgg agaaaactta ttggtctcac gtaaagccca cttgataatg ccgacacatc
     2041 gattacttga tgctgtgtat gagaaagcga aaggagaaaa taagattggg tcaactctca
     2101 aaggaatagg cccttgttat actgataaag ttagtagaaa cggcataaga gttggtgata
     2161 ttgagcatag tacttttgat aagcgataca aaaatgcacg agaacgacac attcgtatta
     2221 tcgaacagta tgatactgat tatgaggata taactattga tggaataaag tttattgaat
     2281 acgaaaacca atggcatgac gcactcaaag aacttaataa acttaaaaaa attaatagcg
     2341 aatattattt gaacaagcaa cttgatgcgg gcaagaaaat att
//
LOCUS       DASCQP010000295         4431 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001121541, whole genome shotgun sequence.
ACCESSION   DASCQP010000295 DASCQP010000000
VERSION     DASCQP010000295.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4431)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4431)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4431
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001121541"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..725
                     /locus_tag="QF480_04980"
     CDS             <1..725
                     /locus_tag="QF480_04980"
                     /inference="COORDINATES: protein motif:HMM:NF039581.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05947.1"
                     /translation="GVASIFCAAGMLLGDLKHDYVRSYMTKFSGLKKTKFLSLFDEMK
                     TEAIKTLIAEGITEDKIQYIPSLDLRYVGQYHEVPLEVSVEDIYNFNLEAIKDAFHTE
                     HNRQFGYELRKEGTELEVINIRFRAIGITEKPHSLSGNIEHGADTLEEALKGRRLAYI
                     PEKDEMQEVPVYNGDILKSNFKINGPAIIEQVNTTVFIGESYNCERGRGGTVVVYNSI
                     LMPDGFKSKSHIQEKEVQYGIN"
     gene            712..2403
                     /locus_tag="QF480_04985"
     CDS             712..2403
                     /locus_tag="QF480_04985"
                     /inference="COORDINATES: protein motif:HMM:NF014585.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HJN05948.1"
                     /translation="MALIKIDKILLSIFRRAFKAITDEMSISLTKTTRSPILCEAKDF
                     VTGLYDADGNMLEQTENLPILSFSLGPVCKVIIDQYCDDIYEGDVIIHNDVFSMGNQN
                     NDVAIFKPIFCEGTLIGWSAAKGHQADIGGAVQGGYNPNATEVWQEALRIPAVKLYEK
                     GKLREDVWNLIFANIRLTMVQEDIKAQIGACSLGERRLSALVSKYGIDCYIAHKLELF
                     KSTEKMMRAEIASVPNGTYEGSSMVYYDGKHLGSKFEIKTKITVNNEDIIFDFSESSS
                     QTNGFVNGTYTSSCSAITLTFLQLVNPNIPHNQGMIVPLTYIVPEGTILNAAYPKATT
                     FGNHLCPQIADSIFKALGPAMPGRVTAGWNHLLCSLFTGVHPGTREKYVDICFMGLKG
                     GSGALEGCDGYDHIGMIDASGGLLDQDYEMYEQQTPNIILKHEFLSGSGGVGKWRGGL
                     GVETIIKMGGTDTTMVVFGDGDVESNYGLFGGKGSVLNSITLTYPDGKNLIPMSKDII
                     EGIPEGTIYKQVAGGGGGYGNPRERDQKLVEEDVQNEVVDKDQAYEEYGFVLNID"
     gene            2551..3915
                     /locus_tag="QF480_04990"
     CDS             2551..3915
                     /locus_tag="QF480_04990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018695953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0006568 - tryptophan metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrpB-like pyridoxal phosphate-dependent enzyme"
                     /protein_id="HJN05949.1"
                     /translation="MKTRKTVLSEKEMPHKWYNILADMPNKPLPPLNPATLEPIGPEA
                     LAPLFPMALIEQEVSTEKWIDIPDEVRNIYTLWRPTPLYRAFGLEKALDTPAKIYYKY
                     EGVSPSGSHKPNTAVPQAFYNAKEGVKKITTETGAGQWGSALAFACQHFGMECEVYMV
                     KVSYEGKPYRKVMMNTWGADVYPSPSDRTNAGRTILAEDPDSPGSLGIAISEAIEVAA
                     SDPNTKYALGSVLNHVKLHQTIIGQEAIKQMEMAGDMPDIVIAPFGGGSNFAGLSFPF
                     LRLNFDEGKNIRCIASEPTSCPKLTRGVFRYDFGDTIGMTPLLPMYTLGHNFVPAPIH
                     AGGLRYHGAGVIVSQLLKDKLIEAVSHTNPEVFDAGVIFARAEGVIPAPEATYGIATA
                     IAEARKCKEEGVSKTILFNLCGHGNFDMQAYDDYFAGKIEEHELTDAEIRESLSKLST
                     PEIT"
     gene            3958..4362
                     /locus_tag="QF480_04995"
     CDS             3958..4362
                     /locus_tag="QF480_04995"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013228.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HJN05950.1"
                     /translation="MNKHETILPEGWSSPKGYSNGIIAAKGRILFLSGQVGWTTEEKF
                     VSEKLVPQFEQALKNIVAIVEKAGGKPTDICRMTCFCKDRDQYLSSRKELGAIWKEII
                     GKHYPCMSMIFVVDLLDHPAVIEIEATAIIPE"
BASE COUNT         1527 a          708 c          947 g         1249 t
ORIGIN      
        1 cgggagttgc ttcgatcttt tgtgccgccg gaatgcttct gggcgatctg aaacatgatt
       61 atgttcgatc ttatatgaca aaattttcag gactcaaaaa aactaaattt ctcagtttgt
      121 ttgatgaaat gaaaactgaa gcaataaaaa cattaattgc tgaagggatc actgaagata
      181 aaattcaata tataccctct ttggatttga gatatgttgg tcaatatcat gaagttccac
      241 tggaggtttc tgttgaggac atttataatt ttaacctaga ggcaattaaa gatgcttttc
      301 acacagaaca taatcgccaa tttgggtatg aactaagaaa agaaggaaca gaattagaag
      361 tcatcaatat tcgatttagg gcaattggca tcaccgaaaa accacattca ttatcaggta
      421 atattgaaca tggggctgat acacttgaag aggcattgaa aggtagaaga ctagcttata
      481 ttcctgaaaa agatgaaatg caggaggtgc cggtttataa tggagatata ctaaaaagta
      541 atttcaagat taacggccct gcgattatcg aacaagttaa cacaacagtt tttattggag
      601 aaagttacaa ctgtgaaaga ggaagaggag gaacagttgt tgtttataat agtatattaa
      661 tgccagacgg atttaagtct aaatctcata ttcaagaaaa ggaggttcaa tatggcatta
      721 attaaaattg ataaaatatt attgagcatc tttcgaagag cgtttaaagc cataacagat
      781 gaaatgagta tttcattaac aaaaaccaca cgttctccaa ttttatgtga agcaaaagat
      841 tttgttaccg gattgtatga tgctgatgga aatatgcttg aacaaacaga aaaccttccg
      901 attcttagtt tttcattagg tcctgtttgt aaggttatta ttgatcagta ttgtgatgat
      961 atttatgaag gagatgtaat aattcacaat gatgtatttt caatgggcaa tcaaaataat
     1021 gatgttgcaa tctttaaacc tattttttgt gaaggaacat taatcggctg gtcggcagct
     1081 aaaggacatc aggctgatat cggtggggct gttcagggag gatacaatcc taacgcgaca
     1141 gaagtctggc aggaggcttt acgtatccct gctgttaaac tatatgaaaa aggaaaacta
     1201 agagaggatg tttggaattt gatttttgct aatatcagat taacaatggt tcaggaagac
     1261 attaaagctc aaataggggc ttgtagtttg ggagagagaa gattgagtgc tcttgtttca
     1321 aaatatggaa tcgactgtta tattgcccac aaacttgagc ttttcaaaag tactgaaaaa
     1381 atgatgagag cagaaattgc ctctgttccg aacggaactt atgaaggaag tagcatggtt
     1441 tactatgatg gaaaacatct tggttctaaa tttgaaatta aaacaaaaat cacggttaat
     1501 aatgaagata ttattttcga tttctctgaa tcgtcatctc aaacaaacgg ttttgtaaat
     1561 ggaacctata cttcatcatg ttcagctatt accttaactt ttttacagtt agttaatcct
     1621 aatataccac acaaccaagg tatgatagtg ccattaactt atattgttcc cgaaggtact
     1681 attctaaatg ctgcatatcc aaaagcaaca acatttggga atcatttatg tccacaaatt
     1741 gcggattcaa tatttaaagc tttgggacct gccatgccag gaagagtaac tgcaggatgg
     1801 aatcatttgt tatgttcctt atttacaggt gttcatcccg ggacaagaga gaaatatgtt
     1861 gatatatgct ttatgggact aaaaggggga tcaggtgcac tggaaggatg tgatgggtac
     1921 gatcatattg ggatgataga tgcttcaggc ggattattgg atcaggatta tgaaatgtat
     1981 gagcaacaaa ctccaaatat catattgaag catgagtttt tgtcaggttc tggtggggtt
     2041 gggaaatgga gaggcggact tggcgtggaa accattatca aaatgggtgg aacagatact
     2101 acaatggttg tgtttggaga tggcgacgtg gaatctaact atggtctttt tggaggaaaa
     2161 ggaagtgtgt taaatagcat tacccttact taccctgatg gaaagaatct tatcccaatg
     2221 agcaaagata ttattgaagg aattccggaa ggcactattt ataaacaggt tgctggagga
     2281 ggtggaggtt atggtaatcc tagagaacga gatcagaaat tagtagagga agatgtgcaa
     2341 aatgaagtgg tagataagga tcaagcttat gaagaatacg gttttgtttt aaacattgat
     2401 taatccgaaa atcaaagacg aaaacccaaa acttttgtgg gaaaatgaaa aacggtaata
     2461 cttctcctta tatatcttaa ttttttacgt tctttatata aaaattttac tatgaccgct
     2521 aattcaatta ctcactaaaa tagaaatctt atgaaaacta gaaaaactgt tttgtcagaa
     2581 aaggaaatgc ctcataagtg gtacaacatt ttggctgata tgccgaataa gcctttaccg
     2641 ccgcttaatc ctgcaacatt agagccaatt ggcccggaag cattggcacc actatttcct
     2701 atggcattaa tcgaacagga agtaagtaca gaaaaatgga ttgatatacc cgacgaggtc
     2761 agaaatattt acacactatg gcgcccaaca ccactttata gggcgtttgg cctggaaaaa
     2821 gcactcgata cacctgcaaa aatttattat aaatatgagg gagtaagccc ttctgggtct
     2881 cacaagccaa acactgctgt tcctcaggca ttttacaatg caaaagaagg ggtcaagaaa
     2941 atcactaccg aaactggagc aggacaatgg ggaagtgcat tggctttcgc atgccaacat
     3001 tttgggatgg aatgcgaagt atatatggtt aaagtatcct atgaaggtaa accatatcgc
     3061 aaagtaatga tgaatacatg gggcgcagac gtatatccat caccatcaga cagaacaaat
     3121 gctgggagaa caattcttgc agaagatcct gattctccag gatcattagg aattgctatt
     3181 tctgaggcaa ttgaagttgc cgcttcagat ccaaatacta aatatgcatt gggaagcgta
     3241 ttaaatcatg taaaactgca tcagacaata attggccagg aggcaataaa gcaaatggaa
     3301 atggccggcg acatgccaga tatagtaatt gccccttttg gtggtggatc aaattttgcc
     3361 ggcctaagtt ttccattctt gagattgaat tttgatgaag gaaagaatat tcgctgtatt
     3421 gcaagtgaac ccacatcttg tccaaagctt acaaggggag tatttcgtta tgattttggt
     3481 gacaccatag gcatgacacc attgttacca atgtatacat taggtcacaa ttttgttcca
     3541 gctcctatac atgcaggagg tctccgctat cacggggccg gtgttattgt aagtcaactc
     3601 ctaaaagaca aattgattga ggccgtatca catacaaatc ctgaagtgtt tgatgcagga
     3661 gtcatttttg caagagcgga aggagttatt cctgcaccgg aagccacata cggaattgct
     3721 actgcaattg ctgaagcaag aaaatgtaaa gaagagggtg tatccaaaac aatactcttc
     3781 aatttatgcg gacatggtaa tttcgacatg caagcatatg atgactactt cgctggaaaa
     3841 attgaagagc atgaattaac agatgcagaa atccgagaat cactcagtaa actcagcact
     3901 cctgaaataa cttgattgta tgaaaatatt gatataggat aataatagac aatagtaatg
     3961 aataaacacg aaacaatatt acctgaaggc tggtcctccc caaaaggcta ttcaaacgga
     4021 ataattgccg ctaaaggaag aatacttttt ctaagcggtc aagtgggatg gacaaccgag
     4081 gagaagtttg taagcgaaaa acttgttcca caatttgaac aagccctgaa gaatattgtg
     4141 gcaatagttg aaaaagcggg aggtaaacca acagacatct gcagaatgac ctgtttttgc
     4201 aaggatcgag atcaatatct ttcatcaaga aaagaacttg gggctatatg gaaagaaatt
     4261 ataggaaaac attacccttg catgagtatg atattcgttg tagatttact cgatcatcct
     4321 gcagtaatag aaattgaggc aacagcgata atacctgaat agatggactt tgaactaaat
     4381 gacatacaaa aatcagtaca acaaacattt aaagactttg tagacagaaa a
//
LOCUS       DASCQP010000296         1662 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001122011, whole genome shotgun sequence.
ACCESSION   DASCQP010000296 DASCQP010000000
VERSION     DASCQP010000296.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1662)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1662)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1662
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001122011"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..830)
                     /locus_tag="QF480_05000"
     CDS             complement(<1..830)
                     /locus_tag="QF480_05000"
                     /inference="COORDINATES: protein motif:HMM:NF021981.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5684 domain-containing protein"
                     /protein_id="HJN05951.1"
                     /translation="MLELIILLPLSFTIPTIFAWKLFEKAGRNGWETLIPFYNLYVFL
                     GIIKKPWWWMLLLFFPFLNVFMFMLMLVELVKCFNKFSLGQQFLSVLFPFIYLPYLGM
                     QSDEVFIDPADRPKIKKSFAREWVDAIIFAVVAATIIRTFLLEAYTIPTSSMEKSLLV
                     GDYLFVSKITYGPKAPNTPLSFPFVHHTLPGTDDIKSYVEWMKLPYYRFAGLKDVDHN
                     DAVVFNYPAGDTVSTRFQSNVSYYALIKKYGTNRVWTDKRNFGEIVLRPVDKRENYVK
                     "
     gene            complement(1123..>1662)
                     /locus_tag="QF480_05005"
     CDS             complement(1123..>1662)
                     /locus_tag="QF480_05005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05952.1"
                     /translation="DTWSEIATGVTETLNSIFFINPSIGWAVGDDSDIGVIIKTTNGG
                     TTWYQVNHPATMTLYAVQFVNDNIGWACGSKLDSGEERGVILYTNDGGENWTEQYVCD
                     QLSTLFSLFFIDGLTGWAVGYDGIIVKTINAGGTSFEGIAESSDKYMASYSFPNPSSN
                     TATIEYKLKTTRNSFYYYL"
BASE COUNT          560 a          325 c          257 g          520 t
ORIGIN      
        1 cttttaacgt aattttcacg cttgtcaaca ggccggagga caatttctcc aaaattgcgt
       61 ttatcagtcc aaactctatt tgttccgtat tttttaataa gtgcataata gctcacatta
      121 ctctgaaacc ttgtagaaac cgtatcacca gcagggtaat taaaaacgac tgcatcatta
      181 tgatcaacat cttttaaacc tgcaaaacgg tagtatggca acttcatcca ttcaacataa
      241 gatttaatgt cgtcagttcc aggtaacgta tgatgtacaa atgggaatga caaaggtgta
      301 tttggcgctt tcggaccata ggttattttg cttacaaaaa gataatcacc tactaataat
      361 gatttttcca ttgaggaagt tggaattgta tatgcctcca acaaaaatgt tcggataatt
      421 gttgcggcca caactgcaaa tatgatggca tctacccact ctctcgcaaa tgattttttt
      481 atcttaggtc tatcagctgg gtcaataaaa acttcatcgc tttgcatgcc caaatagggg
      541 aggtaaataa atggaaataa cacacttaaa aactgttgcc ctaacgaaaa tttgttgaaa
      601 catttaacta attcaaccag catgagcata aacataaaaa catttaggaa agggaaaaac
      661 agtagcaaca tccaccacca aggtttttta ataattccta aaaaaacata cagattgtaa
      721 aatggaataa gtgtttccca gccattacgg cctgcttttt caaataattt ccaggcaaat
      781 attgtaggta tagtaaatga taaaggcagt aaaattatca attctaacat ggttattcta
      841 ttaaagattt agcgattgca agatactttc aattaacttg tgtattagtt aatttatcat
      901 aataaattaa gcgtgcaaaa gtataaaaaa ttggatactg agttttatga aaattactgt
      961 ttattttacc tggaaacaac aatctttccc gatgacacat actcaccagc tactagctta
     1021 taagaatata tgcctgaagc catcacctca acatttatcc ctactcgctg atttccggat
     1081 gattgctttt gttgaacata atcaacttta ttgccaaggt ggttataaat agtaatagaa
     1141 actatttctg gttgttttta acttatattc aatagttgca gtattagagc tcggatttgg
     1201 aaaactatat gatgccatat atttatcaga agattcagca attccctcaa atgaagttcc
     1261 acccgcattg atcgtcttta caattatccc atcataacca acagcccatc cagtaagccc
     1321 gtcaataaaa aacaaagaga ataaagttga tagttgatca cacacgtact gctctgtcca
     1381 gttctcaccg ccatcatttg tatatagtat cacacctcgt tcttctccac tatctagttt
     1441 tgatccacag gcccagccaa tgttatcgtt aacaaattgg acagcataca atgtcattgt
     1501 agctgggtga ttaacttgat accacgttgt tccaccattg gtagttttaa ttattacacc
     1561 aatatcagaa tcatcgccaa cagcccatcc tatggaagga ttaataaaaa atattgaatt
     1621 caaagtttct gttacaccag ttgcaatctc gctccatgta tc
//
LOCUS       DASCQP010000297         2847 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001125755, whole genome shotgun sequence.
ACCESSION   DASCQP010000297 DASCQP010000000
VERSION     DASCQP010000297.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2847)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2847)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2847
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001125755"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..623)
                     /locus_tag="QF480_05010"
     CDS             complement(<1..623)
                     /locus_tag="QF480_05010"
                     /EC_number="1.13.12.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005866461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016703 - oxidoreductase activity, acting
                     on single donors with incorporation of molecular oxygen,
                     incorporation of one atom of oxygen (internal
                     monooxygenases or internal mixed function oxidases)
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HJN05953.1"
                     /translation="MNKITQLFNIKYPIIQGGMIWCSGWELASAVSNAGGLGLIGSGS
                     MYPEVLKQQIEKCKNATTKPFGVNVPLLYPQADKVIDLIIKENIKIVFTSAGNPAKYT
                     TKLKNHGIKVVHVVANSKFALKAQSAGVDAIVAEGFEAGGHNGFDETTTMVIVPMLKE
                     IIDIPIIAAGGIGSGQAIYAAMALGAEGVQIGSLFAASKESSAHENF"
     gene            complement(780..1436)
                     /gene="elbB"
                     /locus_tag="QF480_05015"
     CDS             complement(780..1436)
                     /gene="elbB"
                     /locus_tag="QF480_05015"
                     /EC_number="4.2.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF008747.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenoid biosynthesis glyoxalase ElbB"
                     /protein_id="HJN05954.1"
                     /translation="MEKKKFAVVLSGCGVFDGAEIHEATLTLLAIMRQGAEYQCFAPD
                     IQQHHVVNHISGDEMSESRNVLIESARIARGDIKPLSEFNGNDFDAVIFPGGFGAAKN
                     LSSVAFKGPDAEINPDVEKAVLQMVELKKPVGALCIAPAFIAKILKDVSVTIGTDKGT
                     IEAIEAMGASHVETDHGDVVFDENNLIFTTPCYMLDATILDIDDGANNIVKAMLKRMG
                     "
     gene            1564..2772
                     /locus_tag="QF480_05020"
     CDS             1564..2772
                     /locus_tag="QF480_05020"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005924263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003941 - L-serine ammonia-lyase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009063 - amino acid catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HJN05955.1"
                     /translation="MDSIKKIYKIGNGPSSSHSMGPKKAASIFLDKNPNAFNFKVHIY
                     GSLAHTGKGHMTDVVIIDTLGSKCEIVWHYDDKLPLHPNGMLFEAFDNDSNLTDSWVV
                     YSTGGGELMDKDHKIESKVVYPHTNMAEILVHLKNEGGALWEYVFRNEEDDLIDYLHE
                     VWSVMKDAIERGLNTEGTLPGGLKLLRKASSYYFKARMQNQFVQDDSFLFAFALAVSE
                     ENAAGNIVVTAPTCGSSGILPAVLYLFYRDKEIKEDFIIRALATAGLIGNIVKQNASI
                     SGAEVGCQGEVGVASSMGAAAATQIAGGTMYQIEYAASSALEHHLGLTCDPVAGLVQI
                     PCIERNAFGTQRAIDSALFAINSDGRHLIMFDQVVEAMKQTGKDLPSLYRETALGGLA
                     KVYSDNKEKD"
BASE COUNT          893 a          529 c          511 g          914 t
ORIGIN      
        1 ttgaaatttt catgcgctga agattctttt gacgctgcaa acaacgatcc gatttgcact
       61 ccctcagctc caagcgccat agcggcatat atagcttgtc ctgaaccaat accccctgca
      121 gcaattatag gaatatcgat tatttccttc aacataggta caattaccat agttgtggtt
      181 tcatcaaatc cgttatgccc tcctgcttca aaaccttcag caactattgc atcaacacca
      241 gctgattgtg ccttaagagc aaacttacta tttgcaacaa catgtactac ttttattcca
      301 tggtttttca gtttggtcgt atatttagct ggatttcctg ccgaagtgaa tacaattttg
      361 atgttttctt taatgattaa atcgattact ttatccgctt gaggataaag taaaggcaca
      421 ttaacaccaa aaggttttgt agttgcgttt ttacattttt ctatctgttg ctttagaact
      481 tctggataca tgctacctga tccaataaga cctaaacctc cagcattgga tacagctgag
      541 gctaactccc acccactgca ccaaatcatt cctccttgta taataggata tttaatattg
      601 aacagctgtg ttattttatt catgttgatt aattgtaagc gaacgaatcg atctttgata
      661 ttctgaacac aagacaatgt aacactcatg tgtacaggaa gaatccctaa tctcaatcta
      721 acctgctgag attcttcact acgtcaacta cgttcagaat gacataattg aaatgaattt
      781 taccccatcc tcttcagcat agccttaaca atattattcg caccatcatc aatatccaaa
      841 attgtagcat caagcatata acaaggtgtt gtaaaaatga ggttgttctc atcaaaaact
      901 acgtcaccat ggtcagtctc aacatgtgaa gctcccattg cttctatcgc ttctattgta
      961 cctttgtctg ttccgattgt tacgcttaca tcctttaaaa ttttagcaat aaaagcagga
     1021 gcaatacata gtgcacctac tggttttttc aactcaacca tttgtaatac agccttctct
     1081 acatcaggat taatctcagc atcaggtccc ttgaaagcta cagatgacaa gtttttggca
     1141 gcaccaaatc cgcctgggaa tattacagca tcaaaatcat ttccattaaa ttcacttaac
     1201 ggtttaatat caccacgggc aattcgagct gattcaatta acacattgcg agattcactc
     1261 atttcgtcac ctgaaatatg attaactaca tgatgttgtt ggatatcagg agcaaaacac
     1321 tgatattctg ctccttgcct cataatagct aacaatgtca gagttgcttc atggatttct
     1381 gcaccatcaa aaacaccgca tcctgataag actacagcaa attttttctt ttccatttta
     1441 tataaatctt attttctatc gttcatatca gctaaaatac aaaatatcct ttattttttt
     1501 cttcattatt atattgtttg accattagtt tatttcggca atcatttata ttatttttac
     1561 acaatggatt cgataaaaaa aatttataaa ataggtaatg gtccatcgag tagccattcg
     1621 atgggaccga aaaaagctgc ttcgattttc cttgataaaa acccgaacgc atttaatttc
     1681 aaggttcata tatatggaag tttagcacat acaggaaaag gacatatgac tgatgtcgta
     1741 ataatagaca cattgggtag taaatgtgaa attgtgtggc attatgatga taaattaccc
     1801 cttcatccta acggaatgct tttcgaagct tttgataatg attcaaactt aactgattct
     1861 tgggtagttt atagcactgg tggtggagaa ttaatggaca aagaccacaa gatagaatca
     1921 aaggttgttt atccccacac aaatatggct gaaatactag tacatcttaa aaatgaaggt
     1981 ggtgctttgt gggaatatgt tttccggaat gaagaagatg atttaattga ttatttgcat
     2041 gaagtatggt cagtaatgaa agatgctatt gaaagaggat tgaatacaga aggtacttta
     2101 cccggaggat taaaactctt gcgtaaagca tcatcatatt attttaaggc aaggatgcaa
     2161 aaccagtttg ttcaagatga cagttttttg tttgcttttg cattagccgt aagtgaggaa
     2221 aatgctgcag gtaatatagt tgttacagca ccaacttgcg gatcatctgg aatattgcct
     2281 gctgtacttt acttatttta cagggataaa gaaattaaag aagattttat aattagagca
     2341 ttagcaacgg ctggtttaat aggtaatatc gttaaacaaa acgcttcgat ttcaggagca
     2401 gaagttgggt gtcagggtga agttggtgtt gctagctcga tgggggcagc agcagcaact
     2461 caaattgcag gtggtacaat gtatcaaata gaatatgcag cctcttctgc tttagagcat
     2521 catttgggat taacttgtga tcctgtggct ggtttagttc agattccatg tattgaaaga
     2581 aacgcgtttg gtacacagcg agcaattgat tcggctcttt ttgctattaa ttctgatggc
     2641 agacatttga ttatgtttga tcaagtagta gaagcaatga aacaaacagg aaaagatctg
     2701 ccaagcttat acagggaaac ggctcttggt ggacttgcta aagtttattc tgacaataaa
     2761 gaaaaagatt agagcccact gcagagatgt ttaagcaaga agttcatctg ttggattttt
     2821 aaaaattaag gctcgactag acaacat
//
LOCUS       DASCQP010000298         5509 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001125840, whole genome shotgun sequence.
ACCESSION   DASCQP010000298 DASCQP010000000
VERSION     DASCQP010000298.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 5509)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5509)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5509
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001125840"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..265)
                     /locus_tag="QF480_05025"
     CDS             complement(<1..265)
                     /locus_tag="QF480_05025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05956.1"
                     /translation="MKRQFEFLTLKLEKLDQSIRKKLRFIVLPGFDGMPLYNVLVFFF
                     RGLFKGVLTYRAAAIAYNFFLALIPLILFLFTLIPYVTTSNLQN"
     gene            complement(281..1138)
                     /gene="nadC"
                     /locus_tag="QF480_05030"
     CDS             complement(281..1138)
                     /gene="nadC"
                     /locus_tag="QF480_05030"
                     /EC_number="2.4.2.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008861627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004514 - nicotinate-nucleotide
                     diphosphorylase (carboxylating) activity [Evidence IEA];
                     GO_process: GO:0019363 - pyridine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HJN05957.1"
                     /translation="MTDKERKIITDLIILALEEDIGDGDHTSLATISQNAKGKVELIA
                     KDEGIIAGVKVAAMVFKEVDDKLNIEVRIKDGTSVIPGDIVMIIEGSSRSLLSAERTA
                     LNFIQRMSGIATFTNRVNSQIGDLDTKLLDTRKTTPYNRTVEKLAVRIGGGTNHRFGL
                     FDMIMIKDNHVDFAGGISNAINLTVRYLKDKGKNLKIEIEVRDYNELNEVLENGAVNR
                     IMLDNFSPEELRQAVTLINGRFETEASGGITIDNIRQYAETGVDFISVGALTHQISSL
                     DLSLKTIKN"
     gene            1418..2125
                     /locus_tag="QF480_05035"
     CDS             1418..2125
                     /locus_tag="QF480_05035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05958.1"
                     /translation="MFGKLLYTYFFKLIVITILLVSCDEAETKKSKDFQQNLQSFNST
                     MTKLDSTFDLMDSMQIEVDKVEEERALGKISDEEAVEKLNQINNTLGRKIAKTSNFHP
                     VNGLPSWAKQLGLSEPIGMVLDKDYSQTTSENNDNEGFNSITLVYHGNYDVAMKQSEI
                     IAKKARIPISKDYEDAMILSQKYDIETIKGASYLNFELGSDDNPRYNISITVKDDGTL
                     TINATDTYALMKQLEEK"
     gene            2228..2929
                     /locus_tag="QF480_05040"
     CDS             2228..2929
                     /locus_tag="QF480_05040"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012334.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HJN05959.1"
                     /translation="MNIVITGASKGIGYELCQKFINAGNHNIIAISRTVGAFDNQIDP
                     PGIDKKQSFTFLNLDLTEPNFKETLLPEIDKKLKSIDIIINNAGLLINKSFADLTDND
                     FDSMFDLNVKSVFRLIRDLLPTINSGGHIVNISSMGGYQGSSKFSGLSLYSASKGALA
                     VLTECLAVELKARNISANALALGAVKTEMLSTAFPNYKAPLLAEEMADFIYDFALNGN
                     KYFNGKILPLSVSTP"
     gene            2954..3370
                     /locus_tag="QF480_05045"
     CDS             2954..3370
                     /locus_tag="QF480_05045"
                     /inference="COORDINATES: protein motif:HMM:NF016160.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SoxR reducing system RseC family protein"
                     /protein_id="HJN05960.1"
                     /translation="MRNKIVTHPGIIKKITGNNIEIAIMVTSGCSSCEIKGACAVSDV
                     EEKSVSVNTDSADQYTIGQEITIEMKQSLGTWAVLLGYVFPFIVLFTGLIIFINVGLD
                     QGLAGILALSLLLPYYLTLYLLRNFLSSRFNYNIRQ"
     gene            3616..4611
                     /locus_tag="QF480_05050"
     CDS             3616..4611
                     /locus_tag="QF480_05050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008155212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RnfABCDGE type electron transport complex
                     subunit B"
                     /protein_id="HJN05961.1"
                     /translation="MIVIAIIALGGLGLIAALILYFIANKFKVFEDPKIDEVEEALPS
                     ANCGGCGFPGCRAYAEATVKAAKDKGSLEGLNCPVGGNDVAQTVGNILGLEVEETDPM
                     IAVIRCNGSRTNSPGKVTYEGATSCAFAHALYSGEGGCQFGCLGLADCVDSCDFDAIH
                     MNTETGLPEVNDKCTACGACVTACPRDINELRKKGPKDKKIFVSCVNKEKGAPAKKNC
                     IVACIGCGKCDKVCNFDAITITSFLAYIDFTKCTLCRKCVEVCPTNSIHEINFRPRKP
                     KPEKPKVVAPSVDTPGVKKPTNEESAKPSEQKLSKPKDVENTIAEKPVENIDKKE"
     gene            4628..>5509
                     /locus_tag="QF480_05055"
     CDS             4628..>5509
                     /locus_tag="QF480_05055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005641291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RnfABCDGE type electron transport complex
                     subunit C"
                     /protein_id="HJN05962.1"
                     /translation="MLRTFVLGGIHPTENKISSNAPIETINVPEQAIVPLGQNLGAPS
                     TPIVNKGDMVKVGQLLAEATGFISTNIHSPVSGKVLKIDNALDGSGYKRPAIIINVEG
                     DEWAEGIDTSTDLVNEITLDSKEIIEKIKNAGIVGMGGAAFPTYVKLMPPPGKTAEFL
                     IINGVECEPYLTADHRLMLEKGQEIIIGTRILMKALNVDKAFIGIENNKPDAINHMRE
                     LVRSQDDIEVQTLKVQYPQGGEKQLIKASVNREVPSGKLPIEVGCVVQNVGTAFAVYE
                     AVQKNKPLIERVVTVTGK"
BASE COUNT         1892 a          857 c          982 g         1778 t
ORIGIN      
        1 tattttgtaa attactcgtt gttacatatg gtatcagcgt aaatagaaaa agtattagcg
       61 ggattaatgc aagaaagaag ttataggcaa tcgctgcagc gcgataggtg agcactcctt
      121 tgaataatcc acgaaaaaag aagaccagta cattatatag aggcatacca tcaaaaccag
      181 gcaatactat aaatctcagc tttttacgta tgctttggtc taatttttct aatttaagag
      241 tcagaaattc aaactgtctt ttcaaattaa tttgatttga ttaattttta attgttttca
      301 aacttaaatc aagactactt atttgatgag taagtgctcc aactgaaata aagtccacac
      361 ctgtttcagc atattgtctg atattatcaa ttgtaatacc tcctgaagct tcagtttcaa
      421 accttccgtt gataagagta acagcttgcc ttaattcttc tggtgaaaaa ttatccaaca
      481 taatacggtt aacagcacca ttttcaagta cttcgttaag ttcattgtaa tcgcgaactt
      541 ctatttcaat tttcagattc ttccctttgt ccttgagata acgaactgtt aaattaatgg
      601 cgttgctgat ccctccagcg aaatcaacat gattatcttt aatcattatc atatcaaata
      661 atccaaatcg atgatttgta cctcccccaa tccgtactgc tagcttttca acagttctgt
      721 tataaggagt tgtttttctg gtatctagta atttagtatc taaatctcca atttgactat
      781 tcactctatt agtaaaagta gcgattccac tcatccgctg aataaagtta agagcggtac
      841 gttcagcaga caataatgat ctcgaacttc cttcaataat cattacaata tcacctggaa
      901 taacagaagt gccatctttt attcggactt caatattaag tttatcatca acctccttaa
      961 aaaccattgc agcaacttta acacctgcaa ttatgccttc atccttagcg attaattcaa
     1021 ccttaccctt agcattttga gaaattgtag ctaaagaagt atgatcacca tctccaatat
     1081 cttcttccaa agcaagaata attaaatcag ttattatttt cctttcttta tctgtcatta
     1141 tttgaaactc atttttttca tcattaattt gcttaactaa tatttattgt ctgctttaaa
     1201 tattagtagg catcctcaca ttgtattctt actttccaat catggaactg caaaagtagt
     1261 ttaaattaga tttcttactt tttcaaatat taagattatg caattcttag aattaatact
     1321 ttttaatatt tagtatcaaa aatagtaaaa taagtattgt tgttaattag taactttgac
     1381 gtttaatgtt ttataccttt gaataaaatt tttattgatg tttggaaaat tactctacac
     1441 ttattttttt aaacttatag ttattacaat attgttagtt tcatgtgatg aagctgaaac
     1501 aaagaagagc aaagattttc aacaaaacct tcaatcattt aacagtacga tgacaaaact
     1561 tgacagtaca tttgatctaa tggattcgat gcaaatagag gttgataagg ttgaagagga
     1621 aagagcactt ggcaaaatta gcgacgagga agctgttgaa aaactaaacc aaattaataa
     1681 tacattagga aggaaaattg ctaaaacatc taattttcat ccggttaacg gattgccatc
     1741 atgggcgaag caattaggat tgtcagaacc aataggtatg gtgcttgata aagattatag
     1801 tcagacaact tcagagaaca atgataatga gggatttaac tctataacgc tggtctacca
     1861 cggtaattat gatgtagcta tgaaacaatc tgaaataatc gccaaaaagg caagaatccc
     1921 tataagtaaa gactatgagg acgcaatgat cctgtctcag aaatatgata ttgagacaat
     1981 aaaaggtgcg tcatatttga attttgaatt gggatcggat gataatccaa gatataatat
     2041 ttcaataact gttaaagatg atggtacatt aactataaat gctactgata cttatgcttt
     2101 aatgaagcaa ctagaagaaa aataaccaga tttggcttca aagtctggta gtttgactaa
     2161 gaacaaaatg agtactgcga aataagaagt tttacttatt aattaagaat attcaaaaag
     2221 catattaatg aatattgtaa ttacaggagc aagcaaagga atagggtatg aactctgtca
     2281 gaagtttata aatgcaggaa atcataatat tatcgctatt tcaaggactg ttggggcttt
     2341 tgataatcag atagatcctc caggaattga caaaaaacaa agctttactt ttctaaatct
     2401 tgatctaaca gaaccaaatt ttaaggaaac tttactccca gagatagata aaaagttaaa
     2461 gagcattgat attattatta ataatgcagg tctattaata aacaaatctt ttgctgacct
     2521 aactgataat gattttgata gcatgtttga cttaaacgtg aaaagcgttt ttagattgat
     2581 tcgtgattta ctgccaacta ttaactctgg agggcatatt gttaatatca gtagcatggg
     2641 aggttaccaa ggtagttcta aattttcagg attgtcgcta tatagtgcat ctaaaggagc
     2701 tctggcagtt cttaccgaat gtttggcagt agaattgaag gcaagaaata tatcagcaaa
     2761 tgcattagca cttggtgctg ttaaaacaga aatgctcagc acagcttttc cgaattataa
     2821 agctccttta ttggcagagg aaatggctga ttttatatat gatttcgcat taaacggcaa
     2881 taaatatttt aatggtaaaa ttttaccttt atcagtctct accccttgaa aatgaatatt
     2941 aagaatcaat atattgagaa ataaaatcgt tacacatccg ggaattatta agaaaattac
     3001 tggcaataat attgaaattg ccataatggt tacttcagga tgttcatctt gtgaaattaa
     3061 aggtgcttgc gctgttagcg atgttgaaga aaaatctgtt agtgttaata ccgatagtgc
     3121 tgatcaatat acaattggcc aagaaataac tatagaaatg aaacaatcat taggtacatg
     3181 ggctgtactt ttaggatacg tattcccatt tatagtatta tttacagggt taattatttt
     3241 tatcaatgta ggccttgatc aaggattagc aggtattttg gctttatcgc tcctactgcc
     3301 ttattatctg acattatatt tgttgagaaa tttcctgagc tcaaggttta attataatat
     3361 cagacaataa ttcttctaaa ttaattcaaa tgactaattt agagcggttc taagcaaata
     3421 ttcatatttg ctgataatca agcttatatg tagttaatca atataaacaa aggtttggat
     3481 tatggtaact tactgattat atacacatta cacaagccag atattgtaat ttctttttcc
     3541 tctgtatttc taattattat acttttgttt ttttttaaat tgaacaactt ttaaatacgg
     3601 attaccgtgg ataatataat agtaattgca attatcgcac ttggtgggct tggcttaatc
     3661 gcagccctaa tcctttattt tattgccaat aagtttaaag tttttgaaga tcccaagatt
     3721 gatgaagtag aggaagcttt accatctgcc aactgtggtg gatgcggttt tccaggttgt
     3781 agggcttacg cagaagctac tgttaaggca gcaaaagata aaggaagttt agaaggtttg
     3841 aattgcccgg ttggaggtaa cgatgttgca caaactgttg gaaatattct tggcctcgag
     3901 gttgaagaga cagatccaat gattgctgta ataagatgca atggttctag aactaattct
     3961 ccgggtaaag taacttatga aggcgctacc tcttgtgcat ttgcacatgc actttattct
     4021 ggagagggag gatgtcaatt tggttgttta gggcttgccg attgtgttga ttcatgtgat
     4081 tttgatgcta ttcacatgaa caccgaaaca ggtttaccag aagtaaatga caaatgtaca
     4141 gcatgtggag catgcgttac tgcttgtcca agagatataa atgaactcag aaaaaaaggt
     4201 ccgaaagaca aaaagatatt tgtttcgtgt gtgaataaag aaaagggagc accagccaag
     4261 aagaattgta tcgttgcatg tattggctgc ggaaaatgtg ataaagtatg taattttgat
     4321 gccatcacaa ttactagttt tcttgcatat attgacttta caaaatgtac actttgtaga
     4381 aagtgtgttg aggtttgccc aacaaattca attcatgaaa taaatttcag gccaaggaaa
     4441 ccaaaacctg aaaaacctaa agttgtggct ccttctgttg atacacctgg tgtgaagaaa
     4501 ccaactaacg aagaatctgc taaacctagt gaacaaaaac tatccaaacc aaaagatgtt
     4561 gaaaatacta ttgcagaaaa gccagttgaa aatatagata aaaaagaata aatccgatta
     4621 tatgggaata ttgcgaacat ttgttttagg aggaattcat cccacagaaa ataagatatc
     4681 ctcaaatgca ccaatagaaa ctattaatgt gcctgaacaa gcaatagttc ctttaggtca
     4741 aaatcttggt gctccatcca cacctattgt aaataaaggt gatatggtta aagtaggtca
     4801 gctactagct gaagctaccg gttttatttc taccaatatt cactctcctg tttcaggcaa
     4861 agtgcttaaa attgacaatg ctcttgatgg atctggttac aaaagacctg ctattattat
     4921 taatgttgaa ggtgatgaat gggcagaagg aattgacact tccacggatc tggttaatga
     4981 aataactctt gattcaaaag aaataattga aaaaataaag aatgctggta tagtgggaat
     5041 gggtggtgca gcatttccta cttatgtaaa gttaatgcct cctcctggta aaacagccga
     5101 atttttgatt ataaacggag tggagtgcga gccttattta actgcagatc accgactaat
     5161 gctagaaaaa ggacaggaaa taattattgg tactcgcatt ttaatgaaag cactaaatgt
     5221 tgacaaggct tttatcggta ttgagaacaa taaaccggat gctattaatc atatgcgtga
     5281 acttgttcgg tctcaagatg atatagaggt gcaaacgcta aaagttcagt atccgcaagg
     5341 aggtgaaaag caacttatta aagcatcagt aaatagggaa gtgccatcag ggaagttacc
     5401 aattgaagtt ggttgtgtag tacaaaatgt tggtactgca tttgctgttt atgaagccgt
     5461 acaaaaaaac aaacctctta ttgaaagagt tgttaccgtt acaggtaag
//
LOCUS       DASCQP010000299         7551 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001128954, whole genome shotgun sequence.
ACCESSION   DASCQP010000299 DASCQP010000000
VERSION     DASCQP010000299.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 7551)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7551)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7551
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001128954"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..281)
                     /locus_tag="QF480_05060"
     CDS             complement(<1..281)
                     /locus_tag="QF480_05060"
                     /inference="COORDINATES: protein motif:HMM:NF013482.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05963.1"
                     /translation="MKKNELKVIGKSHQKLDSKERVSGKAIYGHDIELPNMLHGSILR
                     TKYPCADIISIDTSRAEALKGVECVITAADIDVNNISYKRDHPILKKGTV"
     gene            complement(365..847)
                     /locus_tag="QF480_05065"
     CDS             complement(365..847)
                     /locus_tag="QF480_05065"
                     /inference="COORDINATES: protein motif:HMM:NF013923.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HJN05964.1"
                     /translation="MDEKLVTISFTINGENVTKQLMPSLLLIDLIRDKLKLKGTKPGC
                     MEGECGACSVIVNGDAINSCMYLAINIDGKKVTTIEGLGDSKDPLHNVQKKMVDHGAV
                     QCGFCTSGMVMTTKAYSDKCLEEGITPTRDEVKKSLEGNLCRCTGYARIIDAAEAVYK
                     "
     gene            complement(876..3407)
                     /locus_tag="QF480_05070"
     CDS             complement(876..3407)
                     /locus_tag="QF480_05070"
                     /inference="COORDINATES: protein motif:HMM:NF013707.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016903 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase family
                     protein"
                     /protein_id="HJN05965.1"
                     /translation="MAKFKDIVNAPPNSSLILQGNTAFALGVIHAGYHAATGYPGTPS
                     TEVIDRSLGTVQDKILVGWSVNEAVAVSVGLGHSMAGMDTLVTMKIPGIFQAGDTLTT
                     TAFFSVEAGALVILAVTDYVPSSTQHVIDARYFFASSRLPVLEPRDHQEMYDIARTAA
                     DMSKQFNTPVIVLASGMLAHSEALIKTHEARSVKPKKLPENLKKWMNLPVIARANYNK
                     ATTERIPLIKKWADTSQLVNVTYGKEDWGVIVSGDSKIISSEAFNIANIKPSVLSLAI
                     TYPIPEAIIVDFASKIKGKLFVIEDGDRFLEEKIRLLGIDVIGKGDLSTITTWTPDDV
                     LSFLSSYKVISYTSDEKEINIKPNLRPPSICPGCQYRAFSLTVKKLKKQKKLYASFGD
                     IGCSTLLYFNKAIDTVSCMGASDSMRQGFVLSRPEMASKVISVIGDSTECHSGLDSTR
                     NGVFRNIPGVKIILDNYITAMTGGQVAPSSSVNLEGRPHRFSLKTAVEAEGGRTVVVD
                     SYNLKEVEKELKKSLELAEKGKYSTLILEGSCIHEAESKDLVRTIKIDDDKCKNCSLC
                     DMCPGIELDENKHPHFTIFCTNCGSNKPVCMQCCPFDAIQYIETGDMEKSEVKALEIT
                     KNKQHVKMNMDQIPNSLRLAIRGIGGQGNLFFGKVLAEVTLRTPFIETNIVKGDTHGM
                     AQLGGAVLSTFSCGDVFSPVLANNSADALVVMEISEILRPGFLNLLKKDGTIIINNFS
                     VLPINTKKEEYPKLAEIEKALEDFTVIKVDANQLVFEMGDLLGKSANVLILGVLSSVV
                     PFNLIPVQIWIDALSFISTNETVKSQNKLAFDKGRKYLQNIDKEA"
     gene            complement(3431..4609)
                     /locus_tag="QF480_05075"
     CDS             complement(3431..4609)
                     /locus_tag="QF480_05075"
                     /inference="COORDINATES: protein motif:HMM:NF014564.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HJN05966.1"
                     /translation="MTKKKTILALEQALTLPYATERFVQLGWRVIRVEDPGRPGQNNP
                     GDPNRYIGENTGVDDMRAYFMAPNLGKEAITLNLKDSKDQVVLKRIIKELNVDVFMCN
                     TLPKRYKQFGIDYDGLKEANPKLIWCGISAFGPDYPDRAGYDPALQAMLGYMYLTGEP
                     DRDPMLCGLPLIDLKAGDEAFAQVLLAMLQQEETGKGKRIDISMAQCAASWLITALPQ
                     TKFAEDEASLFTRSGNEHRSFVPSNCYPTKDGYVYLAVGSDMQWEKVTQIEGFEHCAK
                     PNRQTNNGRKKDKENIYNDIRKGLENYTTTEFIEVGLMNNLAVAPVNDVQQVGELDFL
                     KKLMVKTILPNGKEVMLFPAPMDTDFLKENNNIMNLPPRLGEHNDKIFKEAGINIKKN
                     "
     gene            complement(4643..5026)
                     /locus_tag="QF480_05080"
     CDS             complement(4643..5026)
                     /locus_tag="QF480_05080"
                     /inference="COORDINATES: protein motif:HMM:TIGR04256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GxxExxY protein"
                     /protein_id="HJN05967.1"
                     /translation="MAQISKENRDPLTEYIIACCFTVHNELGPGFPERIYHKSLIEVL
                     KEEGIKYESEKDIEVTFRGKSIGKFRCDLIIEDHVIVELKAVTGIMPVLFHHQVLAYL
                     KAAKIKTGILINFGNKSCDLKRLSM"
     gene            complement(5052..6674)
                     /locus_tag="QF480_05085"
     CDS             complement(5052..6674)
                     /locus_tag="QF480_05085"
                     /inference="COORDINATES: protein motif:HMM:TIGR00641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HJN05968.1"
                     /translation="MSENKRKYTAEDLGVEKVYLESGIEVDPIYTSQSVDDSSANDEI
                     PGEYPFTRGIHSTMYRKRPFTIRQYAGFASPKETNERFLFLINNGQSGLNVAFDLPTQ
                     CGLDSDDPRAFGEVGRVGMTVDTLEDFEIAFKNIDLDKITVSLTVNGSAIVAIAMYIA
                     LAEKAGYDIGNLRGTAQNDILKEFIGRGTWIFPVDKSVKLVVDTIEYCAKHLPKYSPV
                     SVCGYHIRESGANPIQEMAYAFCIAKAYTDGALSRGIDIDDFASRLSFNFDIYGNLFE
                     QIAKFRGGRRLWAKIIKEEYGAKNDKSCWLRMIAGGGGGGLTKEQPENNIVRSAYYAL
                     ISALSGTQTMALCSYDEAYTIPTEHSAEISLRTMQIMIHEMGICDTVDPLGGSYYVES
                     LTDRFEKEIKEEMKTVDNWEGIINAVATGKIQESVSKQAYEREMGIQTGNVEKVGVNI
                     FTREEEKKDVQFHPYNQEAANKQIEKLRKIKDSRNNDNVAKCLASIKTDAENDRNLMP
                     SIIAAVKEYSTIGEIVQVLKDVYGEFEEPIFF"
     gene            complement(6735..7106)
                     /locus_tag="QF480_05090"
     CDS             complement(6735..7106)
                     /locus_tag="QF480_05090"
                     /inference="COORDINATES: protein motif:HMM:TIGR00640.1"
                     /note="Presence of a B(12) (cobalamin)-binding domain
                     implies dependence on cobalamin itself, in one of its
                     several forms, or in some unusual lineages, dependence on
                     a cobalamin-like analog; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-dependent protein"
                     /protein_id="HJN05969.1"
                     /translation="MKILLSKPGLDGHDVGVKVLAHGLKDAGFDVVYTGLRKSIETIV
                     NIATENKVDAIGLSILSGTHLILAKRMKTVLDENNMDIPWFVGGNIPLVDVKKLEEIG
                     TSKAFATGTKVEEVVAYFKEM"
     gene            complement(7128..>7551)
                     /locus_tag="QF480_05095"
     CDS             complement(7128..>7551)
                     /locus_tag="QF480_05095"
                     /inference="COORDINATES: protein motif:HMM:NF012656.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJN05970.1"
                     /translation="AEIRIMTAALAIGVATAAFESALQYAKERVQFGKPIGKFQAVKM
                     MLADMEVQLQTAKHYVFYAATLSDKNLPRHKESMIAKLYASECANNICDQASRVLASY
                     GYATEYPIQRYLRDARFTLIGGGTSEILKINISKELGL"
BASE COUNT         2145 a         1571 c         1182 g         2653 t
ORIGIN      
        1 accgttccct tttttaggat tggatgatct cttttataac taatattgtt tacgtcaata
       61 tctgcagcag taatcacaca ttcaacacct tttagtgctt ctgctctaga agtgtcaata
      121 gaaataatgt ccgcacaagg atatttggtt cttaatattg aaccatgtag catgtttggt
      181 aattctatat catgaccata aattgccttt ccggaaacac gctctttact atcgagtttc
      241 tggtgcgatt tacctattac ttttagttca ttttttttca cagattaaat agatttatca
      301 tgattactca gatttatttc aaagattatc tatgttaatc ttcctaaatc tgtgtaatct
      361 gttttcattt ataaactgcc tctgcagcat caattatcct tgcatatcca gtacatctgc
      421 aaaggttgcc ttccagactt ttctttactt catcccgtgt tggtgtaatt ccttcttcta
      481 aacacttatc actatatgct tttgtagtca ttaccattcc tgatgtgcaa aaaccacatt
      541 gaactgcacc gtgatcaacc atttttttct gaacattatg taatggatct ttactatcac
      601 ctaaaccttc gattgttgta actttctttc cgtctatatt aattgccagg tacatacatg
      661 aattaatggc atcaccatta acaatcacag aacaagctcc acattcccct tccatgcatc
      721 ccggtttagt gccttttagt ttgagtttat cccttatgag gtcaatcaga agcaacgacg
      781 gcataagttg tttggtcaca ttttctccgt tgatagtaaa agaaattgtt acaagttttt
      841 catccatagt taactaaatt atcataataa tttatttacg cctctttatc aatattttgc
      901 agatattttc tgcccttatc aaatgctaat ttgttttgcg atttgactgt ttcatttgtg
      961 gaaatgaagg ataatgcatc tatccatatt tgtactggta ttaaattaaa tggtactact
     1021 gatgataata caccaagaat cagaacattg gcgcttttcc ctaataaatc ccccatctca
     1081 aagaccaatt ggttagcatc cacttttatc actgtaaaat cttccagagc tttttcaatt
     1141 tcagctaatt taggatattc ttcctttttt gtatttatcg gaagaactga aaaattatta
     1201 attataattg taccatcttt tttaagtagg tttaaaaatc ccggtctgag aatttcactt
     1261 atttccataa ccactaatgc gtcagcagaa ttattagcca gaacaggaga gaagacatca
     1321 ccacagctaa atgtggaaag aacagcccct ccgagttgtg ccattccatg ggtatcacct
     1381 ttaacaatat ttgtttcgat gaaaggagtg cgtaaagtca cttcggcaag aacttttcca
     1441 aaaaataaat taccctgacc accaattccg cgtattgcaa gccttaaaga attgggaatc
     1501 tggtccatgt tcattttaac atgctgttta tttttagtta tttccagagc tttgacttca
     1561 cttttctcca tatcgcctgt ctctatatat tgtatagcat caaagggaca acattgcata
     1621 catacgggtt tattagatcc gcagttggta cagaaaatag tgaaatgtgg atgtttgttt
     1681 tcatcgagtt caattccggg acacatatca cataatgagc aattcttgca tttgtcatca
     1741 tcgatcttaa ttgtcctgac cagatctttg ctttcagcct cgtgaataca tgaaccttcc
     1801 aagattaaag ttgaatattt gcccttctct gccagttcta gtgatttttt cagttctttt
     1861 tccacttctt taagattata ggaatccact acaactgttc ttcctccttc tgcttcaacg
     1921 gcagtcttca agctaaaacg gtgaggtcgc ccttccaggt ttactgacga gcttggagct
     1981 acttgccctc ctgtcattgc agtaatataa ttgtccagta taatctttac tcccgggata
     2041 tttctgaaaa ctccatttct ggttgaatct aggcccgaat gacactcggt ggaatctcct
     2101 atcacactta taacttttga tgccatttcg ggccgggata atacaaaacc ttgcctcatg
     2161 gagtccgaag ctcccataca tgaaacggta tctattgctt tgttgaaata caataaagtt
     2221 gaacaaccta tgtcgccaaa ggaagcgtaa agctttttct gttttttaag ttttttaacg
     2281 gtaagtgaaa aagctctgta ttgacaacct ggacatatag acgggggccg caaattcggc
     2341 ttgatattaa tttctttttc atcagaagta taagatataa ccttatatga tgataaaaac
     2401 gacagtacat catcaggcgt ccaggtggta atagtactta gatctccttt acctattaca
     2461 tctattccta gtaaacggat tttttcttcc agaaatctat ctccatcttc tataacaaat
     2521 agttttcctt tgatcttaga ggcaaaatct actataatag cttcaggtat cggatatgtt
     2581 attgcaagtg aaagaacaga aggtttgata tttgctatat taaaggcttc agagcttata
     2641 attttactgt cgccggaaac tattacaccc caatcttctt tgccataagt gacattgaca
     2701 agttgtgatg tatctgccca tttttttatt aaaggaatgc gctctgttgt agctttattg
     2761 taatttgctc tggcaataac aggtaagttc atccattttt ttagattctc cggaagtttt
     2821 tttggtttaa cggacctggc ttcatgggtt ttgattaagg cttctgagtg ggcaagcatg
     2881 ccagaggcaa gaactattac aggagtattg aattgtttac tcatatcagc agctgttctg
     2941 gcaatatcat acatttcctg atggtcgcgg ggttcaagta caggcaaacg acttgaagca
     3001 aagaagtacc ttgcatctat tacatgttgg gtgctggagg gtacataatc agttactgcc
     3061 agaattacaa gtgcgccagc ttcaacagaa aagaatgctg tggtagtaag agtatcgccc
     3121 gcttgaaaga tgccgggaat tttcattgtt accaaagtat ccatacctgc catagagtga
     3181 ccaagtccca ctgaaacagc gaccgcttcg ttaacggacc agccaactaa gattttatcc
     3241 tgaactgttc ctaatgatct atcaattact tctgtgctag gtgtgcctgg ataaccagtg
     3301 gcagcatggt aaccagcatg aattaccccc aaagcaaaag cagtgtttcc ctgtagaatt
     3361 aaactactgt ttggcggagc atttactata tctttgaatt ttgccatgtt aacctggtca
     3421 gattattttt ttaattcttt ttaatattta ttcctgcttc tttaaatatt ttatcattat
     3481 gttcccctaa tcttggaggt aagttcataa tattattgtt ttcttttagg aaatcagtat
     3541 ccattggcgc agggaataac atgacttctt ttccgtttgg taaaattgtt tttaccatta
     3601 gttttttgag aaaatctagc tccccaactt gttgaacgtc atttaccggg gctacagcaa
     3661 gattattcat caagcccact tcgataaatt cggtagttgt atagttttca agaccttttc
     3721 gtatgtcgtt gtatatattt tccttgtctt tttttcttcc attattagtt tgtcgatttg
     3781 gttttgcaca gtgttcaaaa ccttcaattt gagtaacttt ttcccattgc atatcgctgc
     3841 caactgccaa ataaacatac ccatcttttg tgggataaca atttgagggg acaaaactcc
     3901 tgtgttcatt tccacttctg gtaaacaaac tagcttcatc ttcagcaaac ttcgtttgtg
     3961 gtaatgctgt aatcaaccag gaagctgcac attgagccat tgaaatatct atccgttttc
     4021 ctttcccagt ttcttcttgt tgtaacatcg ccaacaatac ttgtgcaaac gcttcatcgc
     4081 cagcttttaa atctattaac ggtaaaccgc aaagcattgg atctctatca ggttcacctg
     4141 ttaaatacat ataacctaac attgcttgta gagcaggatc atagcctgcc cgatctggat
     4201 agtcaggacc aaatgcagaa attccacacc aaattaattt tggatttgct tcttttaacc
     4261 catcataatc aataccaaat tgtttatagc gttttggaag tgtgttacac ataaacacat
     4321 caacattaag ttccttaata attcttttaa gcacaacttg atctttcgag tctttaaggt
     4381 ttaatgtgat agcctcttta cctaagtttg gggccatgaa gtaggctcgc atatcatcaa
     4441 cacctgtatt ttcacctatg tatctatttg gatctccagg gttattttgc ccaggtctgc
     4501 caggatcctc aacacgaatc acccgccagc ccaattgcac aaatcgctct gttgcgtaag
     4561 gcaaggttag tgcctgttcc aatgctaata tggttttctt ttttgtcaca gattttaatg
     4621 atttttattg tgattacaca gattacattg atagtctttt tagatcacag ctcttatttc
     4681 caaaatttat taatattcca gtttttattt ttgcagcctt tagataagcc agaacctgat
     4741 gatgaaatag aacaggcatt atacctgtta cggcttttaa ctcaacaata acatgatctt
     4801 caataattaa atcacaccta aactttccaa tacttttccc tctaaaagtt acttcaatat
     4861 ccttttcaga ttcatatttt attccttcct cttttagcac ctcgatcagt gatttatgat
     4921 aaatcctttc aggaaatcct ggccccaatt cattatgcac agtaaagcaa caagcaatta
     4981 tatactctgt taaagggtct ctattttctt tactaatctg tgccatcttt attaatcttg
     5041 cctatctgtg gttaaaaaaa gataggttct tcaaattcac cataaacatc tttcagtact
     5101 tgtacaattt cgccaatagt actgtattct tttactgcag caataattga tggcattaga
     5161 ttcctgtcat tctcagcgtc tgtcttaatt gaggctaaac actttgctac attatcatta
     5221 tttcttgagt ctttgatttt tcttaacttt tcgatttgct tgttggcagc ctcctgatta
     5281 taaggatgaa attgaacatc cttcttttcc tcttctctgg taaaaatatt aacaccaacc
     5341 ttctctacat ttcctgtttg tattcccatt tctctttcat aggcctgttt agaaacagat
     5401 tcctgaattt ttcctgttgc tactgcattt ataattcctt cccagttatc aacggttttc
     5461 atttcctctt ttatttcttt ctcgaaacga tctgttaatg actctacata atatgaaccc
     5521 ccaagtggat caacagtatc gcaaataccc atttcatgaa tcattatttg catggttcgt
     5581 aatgagatct ccgctgaatg ttctgttgga attgtatagg cttcatcata actacataat
     5641 gccatagttt gcgttcctga taatgcgctg atcaatgcat aatatgcact tcttacaata
     5701 ttgttttcag gttgttcttt tgtaagtcct ccaccgccgc cgccagcaat cattcttaac
     5761 caacaagatt tatcattttt agctccgtat tcttctttaa tgatttttgc ccaaagtctt
     5821 cttcctccac gaaattttgc tatttgttcg aaaagattac cgtatatatc gaagttaaat
     5881 gataaccgtg atgcaaaatc atcaatatca attcctctgc tcaaagcacc atcagtatat
     5941 gctttagcta tacagaatgc ataagccatc tcctgaatag ggttagctcc gctttctcta
     6001 atatgatatc cacaaacgct taccggacta tattttggca aatgttttgc gcaatattca
     6061 attgtatcaa caacgagctt aactgatttg tcaactggaa aaatccaggt tcctcgacca
     6121 ataaattcct taagtatgtc attttgggct gttcctctta aattgccaat atcataaccg
     6181 gctttctctg ccaaagcaat atacatagca attgctacaa ttgcagaacc atttactgtt
     6241 aacgaaacag tgattttatc cagatcaata tttttaaaag caatctcaaa atcctcaaga
     6301 gtatctacgg tcattccaac acgtccaacc tcaccgaacg cccttggatc atctgaatca
     6361 aggccacatt gagttggcaa atcaaatgca acattcaaac cggattgtcc attattaata
     6421 agaaaaagaa atctctcatt ggtttctttc ggagaagcga atccggcata ctgacgaata
     6481 gtaaaaggtc ttttacgata cattgtagaa tgtattcccc tggtgaaagg atattcacca
     6541 ggtatttcgt cattggcact ggaatcatca acactttgag aagtatatat tggatctacc
     6601 tcaatacctg attcgagata gactttttca actcctagat cctcagcagt atattttctt
     6661 ttattctcac tcatttttag agttttgagt tttcgtttcg aattttaacc attgaaattt
     6721 ctcaaaatta tcaattacat ttccttaaaa taagcaacaa cctcttctac tttggtgccg
     6781 gttgcaaaag cttttgatgt acctatttct tcaagttttt ttacatcaac taaaggaata
     6841 tttccaccta caaaccaggg gatatccatg ttattctcat ccaaaactgt tttcattcgt
     6901 tttgccaaaa taaggtgtgt tccagacaaa attgacaagc caatagcgtc aactttattt
     6961 tctgttgcaa tattcacaat tgtctcaatg gattttctaa ggcctgtata aacaacatca
     7021 aagcctgcat cttttagtcc atgagcaagt actttcacac caacatcatg tccatctaac
     7081 ccaggtttcg ataacagtat tttcatgcaa gtattgattt taataaacta taaccctaat
     7141 tccttactaa tgttaatttt taatatctct gatgttcctc ctccaattaa tgtaaaccgt
     7201 gcatcacgca agtatctttg gattggatat tccgttgcat aaccgtatga tgccaaaact
     7261 ctggaagctt gatcacaaat attattagca cactctgaag cataaagctt ggcaatcatt
     7321 gattctttat gtcttggcaa atttttatcg ctcaaagtag ctgcgtaaaa cacataatgc
     7381 ttggctgttt gtaattgaac ctccatatca gcaagcatca ttttaaccgc ctgaaatttt
     7441 ccaattggtt tgccaaactg tacccgttct tttgcatatt gaagtgcgct ttcaaaggct
     7501 gcggttgcta caccaattgc gagtgccgca gtcataatcc taatttctgc t
//
LOCUS       DASCQP010000300         3960 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001130533, whole genome shotgun sequence.
ACCESSION   DASCQP010000300 DASCQP010000000
VERSION     DASCQP010000300.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3960)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3960)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3960
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001130533"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            92..1513
                     /locus_tag="QF480_05100"
     CDS             92..1513
                     /locus_tag="QF480_05100"
                     /inference="COORDINATES: protein motif:HMM:NF015620.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HJN05971.1"
                     /translation="MPTDHIQSIRILLKDAGYPNNSQIIPLASSGSNRKYFRIIFTDN
                     YYPSTLIASYNNDVRENIAHYSFTEHFRFLGFNVPEIYARDNSYNYFLIKDLGDITLF
                     NLLINKRKKACEYYKTAVANLVKFQVQGIKNLDLDVAYPTRKFTKRSIMWDLNYFKYY
                     FVKPLNIDFDENLLEDDFISISKLLLSAENEYFCYRDFQSRNIMVFENNLWYIDYQGG
                     RQGPLQYDVVSLLYQVKANLSDDEKDILYNHYLENLNKALPGKQVQFEKYYSNFIYFR
                     LMQVMGAYGFRGLVQHKAHFLQSLPIAINSLSGVLQNSPINANVPELKRVLNNIASLD
                     YNFTPESNKGLTIRINSFSYKLKGIPVDYTGNGGGHVFDCRALPNPGRIAELRDYTGL
                     QQSVIKYLEGQDQVNIFITHTIKIIEQSINDYQLRKFNNLQVNFGCTGGLHRSVYCAS
                     KVSEYINNKFPEVNVDVQHLEID"
     gene            1527..2246
                     /locus_tag="QF480_05105"
     CDS             1527..2246
                     /locus_tag="QF480_05105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005858756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HJN05972.1"
                     /translation="MKAIILAAGLGTRLKNITENKPKALIEVNGKTMLEIAILNLKNQ
                     GINNFLINIHHLGNSIIDFLAYNNNFGVNITISDERNHLLDTGGAILKAKKFISGNEP
                     VLVHNVDIISDVNFSNLVEFHRKSESVATLCVRKRNTQRLLLFNNELYLIGWANINKK
                     EFRWVEKSYSEYDMYAFSGIYVISPKFVDLITHTDRFSIIDSWLEIAKKNILTGYLDT
                     SKRWYDLGTTEKINFAEKALK"
     gene            2251..>3960
                     /locus_tag="QF480_05110"
     CDS             2251..>3960
                     /locus_tag="QF480_05110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05973.1"
                     /translation="MKKFLKEAAETILNNKHFGEKSVVVLPNHRSELFLKEEIKKLSS
                     NNIWLPEFYPVNEFIQKASGLKKADNISMYFELFKIHEKIGGIEKKTIDEFLTWAPVM
                     LYDFNDIDNSMADAKDIFKQLSAIKAMQQWNPDGRPLTRLQKNYIHFYNTLFEYYYEL
                     RKTMISIGAGYQGLINRYLVENISSLMKKRYWNNFLLIGINALSEAEIKVFEYINQNY
                     KLDAIWDVDQYYFSKNRSTKNHQEAGKHIRQIIERLKIEVPDNVGNNLKTTAKEIKIL
                     GIPKRVGQAKFVGQELQKQFDSSSTLHFDEASSSLLDTAIVLADEELLIPLINSLPTP
                     KTDDKDTLSYNVTLGYPLSNTQIDHFFTSWIDLMISKSQNKGRILTADLISLINNPII
                     KLVLTNNGLSSEVLVNYLIINNISAVTINELKDHLSTNDSSFFQILAHLLNNEQDANI
                     SSVLEKLREFLYSVIKDGNNFNLLIKEQIQQLIKILSKLLWLIAQNKKIITYKAVKQI
                     VRQLINQSNINLVGEPLRGVQIMGMLETRTLDFKNIYILSSNEGIIPKANNLSSFIPM
                     DIRR"
BASE COUNT         1465 a          605 c          642 g         1248 t
ORIGIN      
        1 atttttaaat attaatgaac aaattaaaac agcaaaaata tgatataact tatcattgca
       61 aatatgtaca tttgtatcaa atcaatccct tatgccaact gatcatattc aaagtataag
      121 aattctgctt aaagatgctg gatatccaaa taactcccaa ataatacctt tggcatcatc
      181 tggatcgaac agaaaatatt tcagaattat ttttaccgac aattattatc cttcaaccct
      241 aattgcatca tataataatg atgttagaga aaatatagct cattattcat ttacagaaca
      301 ttttagattt cttgggttta atgttccgga aatatatgca cgcgataata gctataatta
      361 ctttctaata aaagatcttg gtgatattac attatttaat ttgttgatta acaaacgtaa
      421 gaaagcttgt gaatattata aaactgcagt tgccaacctt gtaaaatttc aggttcaggg
      481 tattaaaaat cttgacctgg atgtggcata tcccacaaga aaattcacca agcgatcgat
      541 aatgtgggat ttgaattatt ttaaatatta tttcgtcaaa cctcttaata ttgattttga
      601 tgaaaatctt cttgaagatg attttatatc aatctcaaaa ctgctattaa gtgccgaaaa
      661 tgaatatttc tgttatcgtg attttcaatc acggaatatt atggtttttg aaaataacct
      721 ctggtatatt gattatcagg gagggcgtca aggtcctttg caatatgatg tagtatcact
      781 cctatatcag gtaaaagcaa acttatctga tgatgaaaaa gatatactgt ataatcatta
      841 tctggagaat ttaaataagg ctcttccagg aaaacaagtt cagtttgaaa aatattactc
      901 aaattttatt tatttcaggc tcatgcaagt tatgggagcg tatggttttc gaggactcgt
      961 tcaacataag gcacactttc ttcaaagttt acctatagct atcaattcat tatctggcgt
     1021 attacaaaat tcacctataa atgccaatgt tcctgaatta aaaagggtac ttaataatat
     1081 tgcatcctta gattacaatt tcacacctga aagtaataaa ggtttgacaa taagaataaa
     1141 tagtttttcg tataaactaa aaggaatccc ggttgattat acaggtaatg gaggtggtca
     1201 cgtatttgat tgtcgagccc ttcctaatcc tggtagaata gctgagttaa gagattacac
     1261 tggtttgcag cagtctgtta taaaatatct tgaaggccag gatcaagtaa atatattcat
     1321 tactcacaca ataaaaatta tcgagcaaag tataaacgac tatcaattaa gaaaatttaa
     1381 taatctccag gtaaactttg gttgtactgg ggggctgcac aggtccgttt attgtgcttc
     1441 aaaggtttct gaatatataa acaacaaatt ccccgaagtt aatgttgatg tccagcatct
     1501 tgaaattgat taaacatatt attaaaatga aagcaatcat attagccgcc ggactaggaa
     1561 caagattaaa aaatatcaca gaaaataaac ctaaggctct gattgaggtt aatggcaaaa
     1621 cgatgttaga aattgccata ctaaatctaa aaaaccaagg tattaataac tttttaatta
     1681 atattcatca ccttggtaat agcataattg atttccttgc ttataacaat aattttggtg
     1741 ttaatattac tatttccgat gaaagaaatc atcttcttga tacaggaggt gcgatattga
     1801 aagcaaaaaa atttatttca ggtaatgaac ctgtcttagt tcataatgtt gatatcatat
     1861 ccgatgttaa ctttagtaac ctggtggaat ttcacaggaa aagtgaaagt gttgcaacat
     1921 tatgcgttag aaaaagaaat actcaaaggt tattattgtt taataatgaa ctatatctaa
     1981 taggatgggc caacatcaat aagaaagaat tcagatgggt tgaaaagagt tattctgaat
     2041 atgatatgta tgcctttagc ggaatttatg tgatatctcc caagtttgtt gaccttatta
     2101 cacatactga taggttttca ataattgatt catggctgga aatcgcaaag aaaaatatat
     2161 taacagggta tttagataca tcaaaacgat ggtatgacct tggaacaacc gaaaaaatta
     2221 attttgccga aaaagcacta aaataggtct gtgaaaaaat tccttaaaga agctgccgaa
     2281 acaatactta ataataaaca ctttggtgag aaatctgttg tagtactacc taatcatcgc
     2341 tcagaacttt ttttaaaaga agaaataaaa aaactctcat ccaataatat ttggctacct
     2401 gaattttatc ctgttaacga attcatacag aaagcatctg gattaaaaaa agccgacaat
     2461 atttcaatgt attttgagct ctttaaaatt catgaaaaaa ttggaggaat cgagaagaaa
     2521 accattgatg aatttctaac ctgggcacct gtaatgcttt atgacttcaa tgatatagac
     2581 aactctatgg ctgatgcaaa ggacattttc aaacaacttt cagctataaa agcaatgcag
     2641 caatggaatc ccgatggacg gccattaacc cgactacaaa aaaactatat ccacttttat
     2701 aacactttgt ttgaatatta ttatgagctt agaaaaacta tgatatcaat tggtgcagga
     2761 tatcagggat taattaaccg atatctagta gaaaatattt catcattgat gaaaaaacga
     2821 tattggaata actttttact tatcgggata aatgcacttt cagaagctga aatcaaagtt
     2881 tttgagtata taaatcagaa ttacaaatta gatgcaattt gggacgtaga ccaatactac
     2941 ttctcaaaga atcgtagcac taaaaatcat caggaagcag gtaagcatat caggcaaata
     3001 atcgaacgac ttaagatcga agtacctgat aatgttggaa acaatctcaa gacaaccgca
     3061 aaagaaataa aaatattggg aataccaaag cgtgtcgggc aagcaaaatt tgttggtcag
     3121 gaattgcaaa aacaatttga ctcaagcagt actcttcatt ttgatgaagc ctcgtcatca
     3181 ctgttagata ctgctatcgt gcttgctgat gaggaactat taataccctt gattaactct
     3241 cttccgacac caaaaactga tgataaagac actttatcat acaacgtaac acttgggtat
     3301 ccattaagta atactcagat tgatcacttt tttacgtcct ggattgatct aatgatttca
     3361 aaatcgcaaa acaaaggaag gattctaaca gcagatttaa tatctctaat aaataatccg
     3421 ataattaagc tggtattaac taataatggt ctaagtagtg aggttttagt taattatctt
     3481 atcatcaata atatatcagc agtaactatc aatgaattga aagatcattt atctacaaat
     3541 gatagttcct tttttcaaat tctagctcac cttctgaata atgaacaaga tgcaaacata
     3601 agttctgttt tggagaaatt aagagaattt ctttattcag taattaaaga tgggaacaac
     3661 tttaatttac tgattaaaga acagatacag caactgatta aaattctgag taagttacta
     3721 tggttgatag ctcaaaataa gaaaattata acttacaagg cggttaagca aatagttcgg
     3781 caattaataa atcaaagtaa tattaatctt gtaggtgagc cactgcgtgg tgtacagata
     3841 atgggaatgc ttgaaacgcg aactcttgat ttcaaaaaca tttacatcct gtcatcaaat
     3901 gagggtataa tacctaaagc gaataactta agttcattta tcccgatgga tattcgcagg
//
LOCUS       DASCQP010000301         2069 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001132233, whole genome shotgun sequence.
ACCESSION   DASCQP010000301 DASCQP010000000
VERSION     DASCQP010000301.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2069)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2069)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2069
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001132233"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..285
                     /locus_tag="QF480_05115"
     CDS             <1..285
                     /locus_tag="QF480_05115"
                     /inference="COORDINATES: protein motif:HMM:NF014567.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HJN05974.1"
                     /translation="VGADKFVKQISIELKKTNSGAIIKINDNGLGISKKIISKIFNPF
                     FTTKSEKKGTGLGLSISYGIISEMEGTIEVESEVGKFTRVKIKLPNDENI"
     gene            282..1682
                     /locus_tag="QF480_05120"
     CDS             282..1682
                     /locus_tag="QF480_05120"
                     /inference="COORDINATES: protein motif:HMM:NF025885.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HJN05975.1"
                     /translation="MSKKINILIVDDEPRVVDEIEEFLTGKNFNVFKAGKPSIAFTLL
                     DSHPINIVILDIKLPEMNGLDVLLKIKSMYPEIEVIMISGHGDIDTVIQALRNGATDY
                     FAKPFRLFDINNAITRTQKYMELSNKLKTAQQNVDELSEKILNSISTQLLGKSDSIKQ
                     LISMMNKVAKSDNTSVLILGESGTGKELVANGIHQLSKRSKNMFYSVNCSAIPETLFE
                     SEFFGHKKGSFTGAIEDKAGWFEIANNGTLFLDEISDMPLGQQAKLLRVLEERQVSKV
                     GSRNIKHVDVRVITASNTKLEHLAAENKFRLDLFHRLSVFVIDIPPLRDRKEDIPLLF
                     DYYLKQYNSQMEKNIRKYDPGIINILSEYSFPGNIRELKNIIERAVIMCDGDTILPNH
                     ISFSALGSPGSNERISDNDNVQQAISDNFDLEFHEKRLIQNALIRANNNKSKAATLLN
                     VTWQALDRRMKKHGLD"
     gene            complement(1778..>2069)
                     /gene="rplT"
                     /locus_tag="QF480_05125"
     CDS             complement(1778..>2069)
                     /gene="rplT"
                     /locus_tag="QF480_05125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005469617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HJN05976.1"
                     /translation="KETKGQFGRRKNVWTVAKNAYEKGKVYAYRDRRGKKRNFRALWI
                     QRINAAARLYDMSYSVFMGKLHAQNIEISRKVLADLAMNNPDAFKAIVKAVK"
BASE COUNT          706 a          328 c          398 g          637 t
ORIGIN      
        1 gttggtgcag ataagttcgt aaaacagatt tctattgaac taaaaaaaac caattcgggg
       61 gcaattatca agataaatga taatggttta ggtattagta agaaaataat ctctaaaatc
      121 tttaatccgt ttttcacaac aaaaagtgaa aaaaaaggta caggtttagg attgtccatt
      181 tcatatggaa taatttctga aatggaaggt actattgaag ttgaaagtga agtaggtaaa
      241 tttacacgag ttaaaataaa acttccaaat gatgagaata tatgagtaag aaaataaata
      301 tattgatcgt tgatgatgaa ccacgtgttg tagatgagat tgaggagttt ttaacaggta
      361 agaatttcaa tgtctttaaa gcgggaaaac cctcaattgc tttcactctg ctggattcac
      421 accctattaa tattgtgatt cttgatatta aacttccgga aatgaatgga ttggatgtgt
      481 tgctaaagat aaaatcaatg tatcctgaga ttgaggtaat aatgatatca gggcacggtg
      541 atattgatac agtgatacaa gcattgagaa atggcgctac cgactatttt gcgaagcctt
      601 tcaggttgtt cgatatcaat aatgcaataa cccgtaccca aaagtatatg gagctcagca
      661 acaagctcaa aactgctcag cagaatgttg acgaattatc agaaaaaata cttaatagta
      721 ttagcacaca gcttctcggg aaaagtgatt caataaagca actaattagc atgatgaaca
      781 aggttgctaa atcggataat acttcggtgt tgatccttgg agagagtgga accggaaaag
      841 aattagtggc aaatgggatc caccagctaa gtaaacgaag taaaaacatg ttctactctg
      901 ttaattgttc tgccatacct gaaactcttt tcgaaagcga attttttgga cataaaaagg
      961 gctcatttac tggtgctatt gaggataaag cagggtggtt tgagatagct aataatggga
     1021 ctttattcct cgatgaaatt agcgatatgc ctttggggca acaggcaaaa ttgctcagag
     1081 tgcttgagga aagacaggta agtaaggttg gatctcgaaa tattaaacat gtagatgtac
     1141 gggtaataac tgcatcaaat acaaaattgg agcaccttgc tgcagaaaat aaattccgac
     1201 tggatttgtt tcatcggcta agtgtttttg taattgatat tcctccttta cgtgatagaa
     1261 aagaagatat accattgtta ttcgactatt atctaaagca atacaattct caaatggaaa
     1321 agaatatccg caagtatgat ccaggtataa ttaatatact ttcagaatat agttttccgg
     1381 gtaatattag ggaattaaaa aatattattg aaagagccgt aattatgtgc gatggcgata
     1441 ctattctgcc taatcacatt tcgttttcag ctttgggttc accaggatct aacgaaagga
     1501 tatcagataa tgataatgtt caacaagcta tttctgataa ttttgatctg gagtttcatg
     1561 aaaagagatt gattcagaat gctttgatcc gtgcaaataa taataaatcg aaagctgcta
     1621 ccttacttaa tgtcacctgg caagcattgg acagaagaat gaagaagcac ggattagatt
     1681 agaaaaagcc atccaataat tctaattatt cataatcttc caaaaaaaaa ctccgaaatg
     1741 tttccacatc ggagttctct taatctggtt tatagcgtta tttcaccgcc tttacgattg
     1801 ctttaaaagc atcagggtta ttcatagcta aatcagctaa tactttcctg cttatttcaa
     1861 tattctgtgc gtgtagcttg cccataaata ctgaatagga catatcgtaa agtctggcag
     1921 cagcattaat tctttgtatc cataatgctc tgaagttacg ttttttacct cgtctgtcac
     1981 ggtaagcata taccttgcct ttttcgtatg catttttagc aaccgtccaa acattttttc
     2041 tacgaccaaa ctgacctttg gtctctttc
//
LOCUS       DASCQP010000302         2237 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001140550, whole genome shotgun sequence.
ACCESSION   DASCQP010000302 DASCQP010000000
VERSION     DASCQP010000302.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2237)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2237)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2237
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001140550"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1372
                     /locus_tag="QF480_05130"
     CDS             <1..1372
                     /locus_tag="QF480_05130"
                     /inference="COORDINATES: protein motif:HMM:NF015155.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HJN05977.1"
                     /translation="EFGIIASVNILVTYLLSLFILPILFSYFPVPKSKHFRHLDKGFI
                     NIVVTRVTNIIITRRTIIYVITSVFFVAAIYGITRLKTTGNIVDDISKKEKLYKDMIF
                     LEKNFNGVMPLEITVNTRKRNGILRLSTLRKIDRLQDTLALYNEFSKPLSVVEVVKSA
                     KQAFYRGREKMYSLPNNQEKNFILSYVPDMGGKKGILNAFVDSNFQTTRISVQMANIG
                     TNDIERILTDIQPKIDSIFPPKKYDVSLTGTSVVFLKGTNYLVKNLFMSLMLAVLIIT
                     ILMALIFSSARMILISLIPNIIPQILTAGMMGYFGIPIKPSTILIFSIALGISVDNTI
                     HFLSRYRLQLRHNKWKIRPAVLAALIETGYSMVYSAIVLFFGFYIFTLSSFGGTEALG
                     YLVSFTLVVALLSNLFVLPSLLLTLDKRIITRSFREPYLEVFDEEEDIELDKLLIREL
                     KPKVDS"
     gene            1390..>2237
                     /gene="rfbA"
                     /locus_tag="QF480_05135"
     CDS             1390..>2237
                     /gene="rfbA"
                     /locus_tag="QF480_05135"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005863000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008879 - glucose-1-phosphate
                     thymidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HJN05978.1"
                     /translation="MKGIILAGGAGTRLHPLTIAVSKQLMPIYDKPMIYYSLSVLLMA
                     DIREILLISTPHDIHNFKLLLGDGSQIGCRIEYAVQEVPNGLAQAFVIGDKFIRNDKV
                     ALVLGDNIFYGTGLPKLLAESNDPDGGIVFAYHVHDPERYGVVEFDDNYNVISIEEKP
                     INPKSNYAVPGLYFYDNTVVDVAKNLKPSARGEYEITDINKYYLEKGKLKVGLLSRGT
                     AWLDTGTFASLTQASQFVEVVQDRQGLKISCIEEIAYKKGVIDAIQLRKIAEPLVKSG
                     YGQYLL"
BASE COUNT          741 a          365 c          414 g          717 t
ORIGIN      
        1 tgagtttgga attattgcat ctgttaacat actggtaact tatctgcttt ctctttttat
       61 tcttccgata ttgttcagct actttcctgt acctaaatcc aaacatttca ggcatcttga
      121 taaaggattc atcaatatag ttgttacacg ggtaacaaat attataatta ccagaagaac
      181 aataatatat gttattactt ctgtattttt tgtcgctgca atttatggta ttacaaggtt
      241 aaaaaccaca ggaaacattg ttgatgacat atcaaaaaag gagaaattat acaaggatat
      301 gattttcctt gaaaagaatt tcaatggggt aatgcccctg gagataactg ttaacacaag
      361 aaaaagaaat ggcattctcc gtctttcgac cttaagaaaa atcgacagat tgcaagacac
      421 gttggcactg tacaatgagt tttcaaaacc actatcagtt gtggaagtag taaaatctgc
      481 aaaacaggcc ttttatagag gtagggagaa gatgtattca cttcccaata accaggagaa
      541 aaactttatt ctttcttatg ttccagatat gggtggtaaa aaaggcatcc taaatgcttt
      601 tgttgattcc aactttcaaa caacacgaat ttcagtgcaa atggcaaata ttgggacaaa
      661 tgatatcgag cgtatcttaa ctgatataca gccaaagatc gattcaattt tcccgcctaa
      721 aaaatatgat gttagcttaa caggaacaag tgtagttttt ctgaaaggaa caaattacct
      781 ggttaaaaac ttatttatga gcttaatgtt agcggttcta attataacga tattgatggc
      841 tcttattttt tcctcggctc gtatgatact catatcactc atcccaaata ttatacctca
      901 aatactaaca gcaggtatga tgggttattt tggtatacct attaagccat caacaattct
      961 aatatttagc attgctctcg gcataagtgt ggataataca attcattttt tatcgcgata
     1021 cagattgcaa ttacgacata ataagtggaa aattcgacca gctgtccttg cagccctcat
     1081 tgaaacaggc tatagcatgg tttattccgc cattgttctt ttcttcgggt tttacatttt
     1141 tacactatct tcttttggtg gtactgaagc actagggtac ctggtttcat ttactcttgt
     1201 tgtagcatta ttatctaatc tgtttgtatt accttcatta ttattaacgt tagataaacg
     1261 tattatcacg agatctttca gggaacctta cctggaagtc tttgatgaag aagaagatat
     1321 tgaactcgat aaactactaa ttagagaatt gaaaccaaaa gtagattcgt aaacaaaaaa
     1381 aataaacaga tgaaaggaat aatactagca ggtggagccg gaactcgttt acatcccctt
     1441 actattgcgg taagtaaaca attgatgcct atttatgata agccaatgat atattactca
     1501 ctatcagtat tgttgatggc agatattcga gaaatattgt taatatcaac tccacatgac
     1561 attcataatt ttaaattgct gttgggagat ggttcacaga tagggtgcag gattgaatat
     1621 gcagttcagg aagttccgaa cggacttgca caggcatttg taattggaga taaatttatc
     1681 cgtaatgata aagttgcact tgttctaggg gataatatat tttatggtac cggattacca
     1741 aaacttctcg ctgagagtaa tgatcctgat ggtggtattg tgttcgcata ccatgttcat
     1801 gaccctgaaa gatatggtgt tgttgagttt gatgataatt ataatgtcat atcgattgaa
     1861 gagaaaccta taaaccctaa atccaattat gccgttccag gtttatactt ttacgacaac
     1921 acagtagttg atgtggctaa aaacctcaaa ccaagtgcaa gaggtgaata tgaaataaca
     1981 gatattaata aatattatct tgaaaaagga aaactaaaag tgggcttgct cagtcgagga
     2041 actgcctggt tagatactgg cacatttgca tctttaacac aagcatctca gtttgtggag
     2101 gttgtgcaag accggcaagg tctgaaaata agttgtattg aagagatagc ttataaaaaa
     2161 ggagtcatcg atgcaataca gttaagaaaa attgccgaac ctcttgttaa aagtggttat
     2221 ggacagtatt tacttga
//
LOCUS       DASCQP010000303         4028 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001142769, whole genome shotgun sequence.
ACCESSION   DASCQP010000303 DASCQP010000000
VERSION     DASCQP010000303.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4028)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4028)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4028
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001142769"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1443)
                     /locus_tag="QF480_05140"
     CDS             complement(<1..1443)
                     /locus_tag="QF480_05140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05979.1"
                     /translation="MVSPTSQPSSLIICEGDSTFSLLIANTTGSTMSGATLLLDLPAY
                     CQYIPGSISGATELDISNLNQPTFSLPDIINNTAHNVDYNAEIICGYDNTEFFNYTVN
                     YNSSNYSGSDSPLQNYYYPSIVITNITNGSATIQINQSVTRDFTIEQQGLNASVDTLI
                     ILDEHTTDIEVLSVNIGTLIIDPGPGPTLIDTIIITGSDLPGGNNLFDYGESIILSET
                     VKLLGCTNGQSTINATWGCYGDYCADFFAFPTVSPAAGAPIINIAFTANVRGWGFIDN
                     SGFVEFTITNNGSGVGTAYDLVTLAGFSSWGNTYYPNSNWLNEIDSFSVNGNYLVAEY
                     NYAAGAINGQFAHYFSYDYTFDPDGPGIGIEDEDGDGYYDDLPIGDTITVKAHTYYDW
                     QEALGSIPTGNSCGRGWTNNSWQGFRYGYDYTDQCSNQPGATWVPNSQLTLFMTYNTN
                     TLQHTIPPDIYEGSIVWMEQEVVTGTRVEDE"
     gene            complement(1767..3167)
                     /locus_tag="QF480_05145"
     CDS             complement(1767..3167)
                     /locus_tag="QF480_05145"
                     /inference="COORDINATES: protein motif:HMM:NF028437.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5106 domain-containing protein"
                     /protein_id="HJN05980.1"
                     /translation="MIKTLRNILLIYLVFVSFLKINADNQYEIKIKVEGYQDSALLLT
                     SYFGKKINLVDTAYSIKPGEFVFAGNTELPGGIYMAVSLDKKKLFEFIINDNQKFSLS
                     TDTSNLTLNMKVKGSKENKIFYSYLKFNEEQYLLNKSLLKSIDSLKASSEEIAILKSS
                     LDSINKQAVDYKLNIIENNQGAFVASLLVAMRDIEIPDSIKESTDSTLSYKYYKQHFW
                     DFFDLSDGRLLRTPIFMRKVDQYFDQVVFFHPDSVISAIDTIILKSRPSEEVVGYLVW
                     HFIAEYQNPKFMGFDKVFVHLVEEYFSKEQITNTTPSILTSLEERATKLKPILLGKSA
                     PNLLLIDSTGSLRSFRSITTNYTVLFFWDSECGICGKEITELKKLHNNPDYDIEIYSI
                     NVNSDLEGWKKALIEKQIPGIKVNGTRSATEDFHDLYDIYGTPVIYVLDRDKKIIAKR
                     IGANKIAEFVKNFEKQ"
     gene            3350..4015
                     /locus_tag="QF480_05150"
     CDS             3350..4015
                     /locus_tag="QF480_05150"
                     /inference="COORDINATES: protein motif:HMM:NF025006.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HJN05981.1"
                     /translation="MKRFNIQQLALFIMLLIFSSLGAQNQISGVIYYHDNDSNPLPNV
                     VVELYDSGDNLVATTTTNDDGEYEFSNVPYGEYYILSSSTQNFGTLNLIDPSIVLQYL
                     NGTYNLNDFEFVAADVNGNGVVNGGDYNKLMKKILGKKNSFEEEWAFEEVEIDFTARD
                     FEEEVEHWGTSTGDVEGIWMPGGRDLDFLVEYQLPTDLNETEIELEIGSSYKDLISGF
                     NFV"
BASE COUNT         1358 a          696 c          652 g         1322 t
ORIGIN      
        1 ttcatcctcg actctggtgc ctgtaacaac ttcttgctcc atccatacta ttgagccttc
       61 atagatatca ggaggaattg tatgttgcaa agtattagta ttgtaggtca taaacaatgt
      121 aagttggcta ttggggaccc atgtagctcc gggttgattt gaacattgat cggtataatc
      181 ataaccatat cggaatcctt gccaggaatt atttgtccaa ccccggccac aactattacc
      241 tgtcggaata ctacctagtg cctcctgcca atcataataa gtatgagcct tgacagtaat
      301 tgtatcccct attggcagat cgtcatagta tccatctcca tcttcatctt caattccaat
      361 acccggacca tcgggatcaa aagtataatc ataactaaag taatgagcga attgcccatt
      421 aattgcccct gctgcataat tgtattctgc tacaagataa ttgccattta cagaaaagga
      481 atcaatctca ttaagccaat tagaattagg ataataggta tttccccaag aggaaaaccc
      541 tgccaaagtt accagatcat aagcagtacc tacacctgag ccattattgg ttattgtgaa
      601 ttcaacaaat ccggagttgt ctataaagcc ccatccgcgt acgttagctg taaatgcaat
      661 attgattatt ggtgcgccag cggcaggtga tacagttgga aaagcaaaaa aatcagcaca
      721 ataatcaccg taacaacccc atgtagcatt gattgtactt tgaccattag tacaaccaag
      781 caatttaaca gtttcagaaa ggatgataga ttcaccataa tcaaaaaggt tattaccacc
      841 aggaagatca gaacccgtaa taataattgt atcaattagc gttggtcctg ggcccggatc
      901 aattatcaaa gtgccaatat ttaccgacaa tacttcgata tcagttgtat gctcatccaa
      961 aattatcagc gtatcaactg atgcattcaa tccttgttgc tctatagtaa aatcacgagt
     1021 tactgattgg ttaatctgaa ttgttgccga accattggta atattcgtaa ttacaatcga
     1081 ggggtagtaa tagttttgaa gcggagaatc actacccgaa tagtttgaac tattgtagtt
     1141 aacagtgtaa ttgaaaaatt cagtattgtc gtatccgcat ataatttcag cattataatc
     1201 aacattatgt gctgtattat tgatgatatc tggaagcgaa aaagtaggtt gatttaaatt
     1261 tgaaatatcc aattcggttg ccccgctaat tgatccgggt atatattggc aatatgcagg
     1321 aagatccaaa agtagagttg cccccgacat agtgctgcca gtagtgtttg ctattagtag
     1381 tgaaaatgtg ctatcgcctt cgcaaataat caaagacgaa ggctggcttg ttggtgagac
     1441 catcacctga gaaaatattg gctgaaatac cagaagcaaa aacaaaaaaa tgatgtgttt
     1501 tatagcatct aaactagtga aagatacagc actaatcttt ttgttgcata ctatcaacaa
     1561 gttacacatt ataaatttgg ttttggagcc taaagatata caaaaagtgg aaatttcatc
     1621 atcaagttca ccttacaaaa gccaatagtt ccattgaagt agacctaatt tgcaacaaaa
     1681 aataaccatt atgttcactg ctggtaaaga gttgttgtta tagagttcca gtagttattt
     1741 tgatatgttt tagtatgtaa aattcatcat tgcttttcaa aattcttaac aaactctgca
     1801 attttatttg ctccaattct ttttgcaatt atttttttgt ccctatcaag aacataaata
     1861 actggtgtac cataaatatc atataaatca tgaaaatcct ctgttgcact tcttgttcca
     1921 ttaactttaa ttcctggtat ttgcttttct ataagagctt ttttccatcc ttcaagatca
     1981 ctatttacgt ttattgagta aatctcaata tcataatcag gattattgtg caatttcttt
     2041 aactctgtaa tttctttgcc gcaaataccg cattcagaat cccaaaaaaa caaaactgta
     2101 taattggttg ttattgatct gaatgatcga agtgaaccag tgctatcaat aagaagtaag
     2161 ttcggtgcag atttccctaa taatattggt tttagtttag tagctctttc ttctaacgag
     2221 gttaatatgg aaggagttgt gtttgtaatc tgttctttac taaaatattc ttcaaccaaa
     2281 tgaacaaata ctttatcaaa acccatgaac tttggatttt gatactcagc tataaaatgc
     2341 caaaccaaat atccaacaac ttcttctgat ggccttgatt ttaaaataat agtatcaatc
     2401 gcactaatta ctgagtcggg atgaaaaaac acaacctggt caaaatactg atcaactttt
     2461 ctcataaata taggtgtacg taacaatcgg ccatcactta agtcgaaaaa atcccagaaa
     2521 tgttgtttgt aatacttata tgaaagcgta ctatcagttg attccttaat tgaatccgga
     2581 atctctatat cccgcatagc aactaataat gaagctacaa aagccccttg attattttca
     2641 ataatattta atttatagtc tacagcctgt ttatttattg aatcaagact actttttaaa
     2701 attgcaattt cctcggacga agctttaagt gaatcaatac ttttcaacag tgatttattt
     2761 agtagatact gttcctcatt aaattttaga taggaataaa aaatcttgtt ttcttttgaa
     2821 cctttcactt tcatatttaa tgtaaggttc gaagtatccg tactcaaact aaatttttga
     2881 ttatcattaa taataaattc aaataacttc ttcttatcca agctaacagc catatatatc
     2941 cctcctggta attctgtatt tcctgcaaac acaaactcac caggtttaat tgaatatgct
     3001 gtatctacca gattaatttt tttaccgaaa tatgatgtta gcaataaagc actatcctga
     3061 tacccttcta ctttaatttt aatctcatat tgattatctg catttatttt caagaaagac
     3121 acaaaaacta aatatatcaa taaaatattc cttaaggtct ttatcatatt gttgttttca
     3181 attaaaattg ccaaaattat caaagataat cacgaaaatg cgtgtgatat tgaataaatt
     3241 ttaaaaaaaa caactttttt ttataaaaca ggtataaaat agaaaatttt cggtactact
     3301 agtagttaga ggaaactctc ataaaatttg tacataaacc acttaagcta tgaaacgatt
     3361 caatattcag cagttagcgt tatttattat gttattgatt ttcagctccc taggagctca
     3421 gaatcaaatc tcaggggtga tctattacca tgataatgat tcaaaccctc ttccaaatgt
     3481 agttgtagaa ctgtacgatt caggagataa tcttgttgcg accacaacaa caaacgatga
     3541 tggagagtat gaattttcaa atgttcccta tggtgaatat tacatactat catcctcaac
     3601 tcagaatttt ggtactttaa acttgataga tccttctata gttcttcaat atttgaatgg
     3661 gacatataat ttaaacgatt ttgagtttgt agctgctgat gtaaatggaa atggtgttgt
     3721 taatggtggt gactataata aattgatgaa aaaaattctt ggaaagaaaa actcttttga
     3781 agaagaatgg gcatttgaag aagtagagat tgattttact gcaagagatt ttgaggagga
     3841 agtagaacac tggggaacat ctacaggaga tgttgaagga atttggatgc caggtggaag
     3901 agatcttgat ttcttagtag aatatcagct tccaactgat ttaaatgaaa cagaaattga
     3961 actggaaatt ggttcaagct ataaagacct tattagtggc ttcaattttg tatagtttca
     4021 gcaaaaag
//
LOCUS       DASCQP010000304         2873 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001143456, whole genome shotgun sequence.
ACCESSION   DASCQP010000304 DASCQP010000000
VERSION     DASCQP010000304.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2873)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2873)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2873
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001143456"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..489)
                     /locus_tag="QF480_05155"
     CDS             complement(<1..489)
                     /locus_tag="QF480_05155"
                     /inference="COORDINATES: protein motif:HMM:NF024491.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D-like domain-containing protein"
                     /protein_id="HJN05982.1"
                     /translation="MKLKEPYHLFDDPLRYYNEMIEDIEKAKKYIYIETFRVGKDEIG
                     ERFRRVLTKKAKEGVEVKLLIDYWGAGPIDHDYFKALTKYNGEVRFFEKIKYNSDIFT
                     RSHRRNHRKLLLIDDEITYIGSSNLTGYNMNWRESMLRMKSDITITFVKLFKQDFKSF
                     NKY"
     gene            complement(489..1883)
                     /locus_tag="QF480_05160"
     CDS             complement(489..1883)
                     /locus_tag="QF480_05160"
                     /inference="COORDINATES: protein motif:HMM:NF026288.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HJN05983.1"
                     /translation="MRKTLSTILIFVITVGSALSLTINKIDSLEAQLLVTQSEEKVKT
                     LINLSEAYRNIVYNDCIKYGTEAVELADKLNNKKLKALALKSLGVSSYYSGDMDISLG
                     YYSQSLELFQEIDDKKGQASCLNNIGNVYEEWANFNKAVDYYTQSFKMEEILNNKEGM
                     AISLLQIGNISFYRANYQEALDNYYRALLIFTEIEDMGGIAYSYNSIGIIFRKWNKFE
                     KALDYYSKAKILYSETNNKRALSQVLNNMGEIYNSELKDYKTALKLYNEALQLKKSID
                     DVVGIALLNNNLGTLYANMEDSKKALEFFNNSLKMYQELGVSTGVVMVNFNLGDIYQD
                     SDKTKIAIDYFKKSLDMAKKIGQVEYINSNYEALIHCYASLGEYDEFEKYFRLFSIRK
                     DSLINKLHELEMNEMETKYKVEESIRESVQLQKANEEKEKEINKYKFLLIGVGGAIIL
                     LIFVYILFLRIRKK"
     gene            1976..2851
                     /locus_tag="QF480_05165"
     CDS             1976..2851
                     /locus_tag="QF480_05165"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YicC/YloC family endoribonuclease"
                     /protein_id="HJN05984.1"
                     /translation="MIKSMTGYGKHVAQEENRIISVEIRTLNSKQLDINLRTPQLLKH
                     KEIEIRKSIGSILQRGKIDVNIAFEQNSAESASVIDLNMANHYYNEMKSFAESIDQTN
                     FSDYLSLIMKMPDVIVQKDSDINEDELELVFECLSKALLAVDKFRITEGAFLEKDMAL
                     RINNILNLLTEVDKYEKQRAVNIKQRIKTNLSNFMQDPVTDNNRLEQEMIYYIEKLDI
                     TEEKLRLKNNCDYFLENINNVESSGKKLGFIVQEIGREINTLGSKANDSSLQRVVVLM
                     KDELEKIKEQLFNIL"
BASE COUNT          955 a          459 c          428 g         1031 t
ORIGIN      
        1 gtatttgtta aaacttttaa agtcttgctt aaataattta acaaatgtaa tagtaatgtc
       61 acttttcatt ctaagcattg attcgcgcca gttcatatta taaccagtaa gattagatga
      121 cccgatataa gttatttcat catcaattag gagcagtttt ctatgatttc ggcgatggct
      181 tctagtaaaa atgtcggaat tatattttat cttttcaaaa aatctaacct ccccattata
      241 tttagttaat gctttaaaat aatcatgatc aattgggcca gcaccccaat aatcgattag
      301 taactttacc tcaacacctt cctttgcttt ttttgttagt acccttctaa agcgttctcc
      361 aatttcatct ttgcctactc tgaaagtttc aatgtaaata tattttttgg ccttttcaat
      421 gtcctcaatc atctcattgt aatatctcaa tggatcgtca aatagatgat atggttcttt
      481 aagcttcatt attttttcct gattctaaga aatagaatat aaacaaatat taaaagtatt
      541 attgcaccac caaccccgat aagtaaaaat ttgtatttat taatttcctt ctctttttct
      601 tcatttgctt tttgcaattg cacactttca cgaatacttt cttcaacttt gtattttgtc
      661 tccatctcat tcatttctaa ctcatgtaac ttgtttatca atgaatcttt tcggatggag
      721 aaaagtctga aatacttttc aaactcatca tattcaccta aactggcata gcaatgaatc
      781 agggcctcgt agttactgtt tatatattca acttgtccga ttttcttagc catatcaagg
      841 cttttcttaa agtaatcaat tgctatttta gttttatcag aatcttgata aatatcgcct
      901 aggttaaagt ttaccattac tacgcctgtt gaaactccca attcttgata catctttaag
      961 ctattgttaa aaaattcaag tgccttttta ctgtcttcca tatttgcata aagggttcct
     1021 aagttgttat ttagaagagc tattccaaca acgtcgtcaa tactcttttt taactgtagg
     1081 gcttcattat ataatttaag cgctgtttta taatctttca attcactatt ataaatttct
     1141 cccatgttgt ttagtacttg agaaagtgct cttttattgt ttgtttcaga atacaagatt
     1201 tttgcttttg agtaataatc aagtgctttt tcaaacttat tccattttct gaagatgata
     1261 ccaatgctgt tatacgagta tgcgatccct cccatgtctt ctatttcagt aaaaattaaa
     1321 agagcacgat aataattgtc gagagcctcc tgataattag ctctgtaaaa acttatattc
     1381 ccgatctgga gtaatgaaat tgccatacct tctttattgt taagaatttc ctccatctta
     1441 aacgattgag tataataatc gactgctttg ttaaagttcg cccattcttc gtaaacgttc
     1501 cctatattat ttaaacagct agcctgacct tttttgtcat caatttcttg gaataattca
     1561 aggctttgtg aataataccc aagggagata tccatatctc ctgagtaata actgcttact
     1621 cccaacgatt taagcgcaag cgcttttaat tttttattgt ttaatttatc agctaattca
     1681 actgcttctg tcccatattt aatacaatca ttatatacaa tgtttcggta agcttcagaa
     1741 agatttatta atgtttttac tttttcctcg gattgggtta caagaagttg ggcctctaaa
     1801 ctgtcaattt tatttatggt taacgacaaa gcactgccaa ctgtaattac aaaaatgagt
     1861 atagtagaca acgtttttcg catatctgca aatttaataa aagaaactta atcgatttat
     1921 tgatagaatg attagactat acttttatat ttgtataaaa ttcaattagt ctagtatgat
     1981 aaaatcaatg acaggctacg gaaaacatgt tgcccaggag gaaaatagaa taatatcagt
     2041 tgaaatacga acacttaaca gtaaacaact tgatattaat ttgagaacac ctcaattatt
     2101 aaaacataag gaaattgaaa taagaaaatc aataggttct atattacaga ggggtaaaat
     2161 tgatgtaaat atcgcttttg aacaaaactc agctgagtca gcctctgtaa ttgatcttaa
     2221 tatggcgaat cattattata atgagatgaa atcatttgct gaatcaattg atcaaactaa
     2281 ttttagcgat tacctttcct tgattatgaa aatgcctgat gtgattgtac agaaagattc
     2341 agatatcaat gaagatgaat tggaattagt attcgaatgt ttgagcaaag ctttacttgc
     2401 tgttgataag tttagaataa ctgaaggtgc ttttcttgaa aaagatatgg cattgagaat
     2461 taataatata ctaaatctgc taactgaggt tgataaatat gagaagcaga gagctgttaa
     2521 tattaagcag aggattaaaa ctaatctaag taatttcatg caagatccgg ttaccgacaa
     2581 taacagattg gaacaggaaa tgatttatta tatcgaaaaa cttgatatca cagaagagaa
     2641 gctaaggctt aagaataatt gtgattactt tctcgaaaac ataaataatg tagagtcatc
     2701 cggtaaaaaa cttggattta ttgttcagga aataggacgg gaaataaaca cattgggatc
     2761 aaaagctaac gattctagct tacaaagggt agttgtactt atgaaagatg agttggaaaa
     2821 aataaaggag caactattta atattttgta gtgatggatg aaagaaattc taa
//
LOCUS       DASCQP010000305         1786 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001145610, whole genome shotgun sequence.
ACCESSION   DASCQP010000305 DASCQP010000000
VERSION     DASCQP010000305.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1786)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1786)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1786
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001145610"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..282)
                     /locus_tag="QF480_05170"
     CDS             complement(<1..282)
                     /locus_tag="QF480_05170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05985.1"
                     /translation="MGIIKKQSISGTIYSYVGVVLGFITTGLLYPQIFTTEEIGLLRI
                     LVSYSLLFAQFAGLGINTVTIKLFPYFRNYERKHHGYLGLALLVSTVGLI"
     gene            complement(313..1083)
                     /locus_tag="QF480_05175"
     CDS             complement(313..1083)
                     /locus_tag="QF480_05175"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF025217.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HJN05986.1"
                     /translation="MDNKNIYEKYDWESLKEEHLIGKIGKILESIPDDVSSIVDIGCG
                     NGVITNILNKKFDIVAVDRSEKALKYVNTKKIKADADSIPLEDSSFDIVFSSELLEHL
                     PSDILKGTISEFKRLSKKYILITVPNSENPDKLSIVCPECGYLYNSPNHLRSFDIKKL
                     TNFFPEYKLINTFTFGKRVRYYNRNILKLKTKFAPPKSWIPYYWMPKEKRKTTCPSCE
                     FTFENPYKFNLLSLGFDLLNIIASPKKPYWLFALFEKV"
     gene            complement(1490..>1786)
                     /locus_tag="QF480_05180"
     CDS             complement(1490..>1786)
                     /locus_tag="QF480_05180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN05987.1"
                     /translation="HLKSEQTDNSSPNKLFQYMYFQKPVMVSDCTSLERVVNETNCGI
                     VYKYDSPESFSKSAQSIIKSGLLNTFGRNGRKSVLDKYNWDESAIPFLEMYNSL"
BASE COUNT          609 a          256 c          279 g          642 t
ORIGIN      
        1 tataagacca actgttgaaa caagtaatgc aagccccaga tatccatggt gcttacgttc
       61 ataatttctg aaataaggga aaagcttaat tgtcacggtg tttataccaa gtcctgcaaa
      121 ctgtgcaaac aataaagaat atgagaccaa tattctcaac aagccaattt cttcggttgt
      181 aaatatttga ggataaagaa ggccggtagt aataaaccca agcacaacac ccacatatga
      241 atatatggtt ccagatatcg attgtttttt tattataccc aaagttacat tgtataaaat
      301 aagtgcataa aactatactt tttcgaataa agcaaaaagc cagtaaggtt tttttggaga
      361 agcgattata ttcaataaat caaaacccaa tgagagtaaa ttgaatttat atggattttc
      421 aaaagtgaat tcacatgatg gacaagttgt tttgcgcttt tcctttggca tccaataata
      481 tggaatccat gattttggag gtgcaaattt ggtttttagt ttcaatatat ttctgttata
      541 atacctaacc ctcttgccaa aagtaaatgt atttattagt ttgtattccg gaaaaaaatt
      601 agttaatttt tttatatcaa aacttcttaa atgattgggg ctattatata aataaccaca
      661 ttcagggcat actattgaaa gcttgtcagg attttcgcta ttaggcacag ttattaagat
      721 gtattttttt gataaccgtt taaactcaga aatagtacct tttaatatgt cacttggcaa
      781 atgttccagt agctcacttg aaaaaactat atcgaaagaa gaatcttcaa gaggaattga
      841 atccgcatcg gcttttattt tttttgtatt gacatattta agagcctttt cgcttctgtc
      901 tacagcaaca atatcaaact ttttattaag aatattagtt ataacgccat ttccacaacc
      961 aatatcaaca atagaagaaa cgtcatctgg tattgattct aaaattttcc cgatttttcc
     1021 aataaggtgt tcttctttca gactttccca atcatatttc tcataaatat ttttgttgtc
     1081 cattgtatta ttgattatct gtatgcaatt tataaatttt caaagatatg ccattatcaa
     1141 ttatcttagt aaggtgttca aaacaaatca ggtaatgtga ctggaagttt atgaataaaa
     1201 tgagttcgta ttagatttga aaaggcatta ttaatccctt gttgttgaga tgtaaatgat
     1261 taaatagcaa tgtgctaata tgcacaattc gcctttggat ttggaaaatg aaagaagaat
     1321 aaggttattg tttcaatata gaattattgt attaagttat tatatttaaa atagatgcct
     1381 aatagttact ggttttgata tgagattaaa ataatttatt tcgtgtgttt cttctgttga
     1441 taaatagcta tcatatttgt ataaaaatat tgatatagaa taagtaggtt taaagtgaat
     1501 tatacatttc aagaaatgga atagcacttt catcccaatt gtatttatca agcactgact
     1561 ttcttccgtt tcttccaaag gtgtttaata atccagattt aataattgat tgtgcactct
     1621 tcgaaaaaga ttcagggcta tcatatttat atacaattcc gcaattagtt tcgtttacaa
     1681 cacgttccag tgacgtgcaa tcactaacca ttactggttt ttgaaaatac atatactgaa
     1741 aaagtttgtt gggcgatgag ttatcagttt gttcggattt aagatg
//
LOCUS       DASCQP010000306         1657 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001147434, whole genome shotgun sequence.
ACCESSION   DASCQP010000306 DASCQP010000000
VERSION     DASCQP010000306.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1657)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1657)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1657
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001147434"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..655
                     /locus_tag="QF480_05185"
     CDS             <1..655
                     /locus_tag="QF480_05185"
                     /inference="COORDINATES: protein motif:HMM:NF013694.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="CorA family divalent cation transporter"
                     /protein_id="HJN05988.1"
                     /translation="LITVGKTHWIVDSMFKEAQEQERLGTDFEIGTSDALLYTILEKI
                     MNESVFILRKIGLELELINRELFSGKARRIIERLSVTRKNIIAINTMFKPQLRVFNKF
                     ESGKVEGFADNMEDYWGNILDYYNKMWDMTEDYGELIEGLSTTFDSMQTNNTNEIMKI
                     LTLISSIILPLTFLTGLYGMNVLLPMEKNDLAFWIIIIVMFIIGGGMVAYFKKRKWL"
     gene            complement(686..>1657)
                     /locus_tag="QF480_05190"
     CDS             complement(686..>1657)
                     /locus_tag="QF480_05190"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: protein motif:HMM:NF012991.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0046417 - chorismate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HJN05989.1"
                     /translation="HQLAAIKQVNIFRAGIWKPRTRPGDFDGVGEIGLEWLKRVKKET
                     GLLTTVEVADTSHVEKALKHEVDILWIGARTVVNPFSVQAIAEALTGVNIPIMVKNPV
                     NPDIKLWLGAIERFNAIGINKLIAIHRGFHYFEKSPFRNAPMWEIPIELKRIVPSLPI
                     IVDPSHICGRQELIEVIAQKGLDLEMDGLMIESHRDPKNALTDSAQQITPDDLQKLLN
                     KLVIRHKKGDIDFQHKLEELRTEIDKLDGELLQILAKRMEIIDEIGDYKRDNDITILQ
                     MKRWAGMIKDRMSIGTHLGLNSSFMKTLLNLIHKESIQRQEDIFKKK"
BASE COUNT          492 a          305 c          294 g          566 t
ORIGIN      
        1 tctaattaca gttggcaaaa ctcactggat tgtagatagc atgtttaaag aggcgcagga
       61 gcaggagagg ctgggaactg attttgaaat cggaacatca gatgctttgt tatataccat
      121 actcgaaaaa ataatgaatg agtctgtatt tatcttacgt aaaattggtc tcgaacttga
      181 gttaatcaac cgtgaattat ttagtggaaa agcacgcaga attattgaaa ggctttcggt
      241 tacccgaaaa aatataattg ccattaacac aatgtttaaa cctcaactta gagtttttaa
      301 caagtttgag tcgggtaaag tagaaggttt tgctgataac atggaagatt attggggtaa
      361 catccttgac tattataaca agatgtggga tatgaccgaa gactacggcg aattgattga
      421 gggcttatca actactttcg attcaatgca gaccaataat acaaacgaga taatgaagat
      481 cctcactctt atctcatcca taattctccc tcttacgttt ctcaccggcc tttacggtat
      541 gaatgtattg ttaccaatgg aaaaaaatga tctggctttt tggattataa taatagttat
      601 gtttattatt ggtggtggaa tggtagccta tttcaagaag cgaaaatggc tatagagttg
      661 agagttaatc taatttaata ttaccctact ttttcttaaa tatatcttcc tgtctttgaa
      721 ttgattcctt gtgtatcaga ttaagtaatg ttttcataaa agaactattc aatcccaaat
      781 gagtaccaat tgacattctg tctttgatca tgcctgccca acgtttcatt tggagtattg
      841 tgatatcgtt gtccctttta taatcaccaa tttcatcaat tatttccatt cttttagcca
      901 atatttgcag tagctcacca tcgagtttgt ctatctctgt acgtagttct tcaagtttat
      961 gctggaaatc gatatctccc tttttatgtc tgataacgag cttgttaaga agtttttgaa
     1021 gatcatctgg tgtaatttgt tgagccgaat ccgttaaagc attttttggg tcgcgatgac
     1081 tttcaatcat caaaccatcc atttcaaggt ccaaaccttt ttgggcaata acttcaataa
     1141 gttcctgacg tccacagatg tggcttggat caacaattat aggaagcgaa ggaacaattc
     1201 tttttaactc aattggtatt tcccacatag gtgcatttcg gaatggtgat ttctcgaaat
     1261 aatgaaaacc tctatgtatg gcaattaatt tattaattcc tatagcattg aacctttcta
     1321 ttgcaccaag ccacaattta atatcaggat ttaccggatt tttaaccatt attggtatgt
     1381 taacaccagt tagagcttct gcaatggcct gtacagaaaa agggttaaca acggtccgtg
     1441 caccaatcca tagtatatca acctcatgtt ttaaagcttt ttccacatga cttgtatctg
     1501 caacttctac tgttgttaat aagcctgttt ctttttttac tcgcttcaac cattctaatc
     1561 cgatttcgcc cacgccatca aaatcaccag gacgtgtgcg aggtttccat atccccgctc
     1621 tgaatatatt tacttgttta atagcggcta gctgatg
//
LOCUS       DASCQP010000307         3410 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001148709, whole genome shotgun sequence.
ACCESSION   DASCQP010000307 DASCQP010000000
VERSION     DASCQP010000307.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3410)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3410)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3410
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001148709"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..806
                     /locus_tag="QF480_05195"
     CDS             <1..806
                     /locus_tag="QF480_05195"
                     /inference="COORDINATES: protein motif:HMM:NF014697.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TIGR00366 family protein"
                     /protein_id="HJN05990.1"
                     /translation="ESNHFLTGLMGVIPVSETIFSSMNITLYAAFLVLIPSTFLLLSR
                     IKANNFTDQLDLPEAAPILLSQSRRQYLGFALGIVIAFISVYQFYLYGLSALNINLIN
                     FILLSLGLILYANIEQFMKAVTSAISSSSGIMIQFPIYAGIMGLMKCSGLADVFTQSL
                     ISVSSPIALPIYGFLSAAVINFFVPSGGGQWAVQGPILVEAAQQLGVSVPKTIMGLAY
                     GDQLTNMIQPFWAIPLLAITGVKAKSILPYTFVIMIVGGIASVIALYIF"
     gene            883..1650
                     /locus_tag="QF480_05200"
     CDS             883..1650
                     /locus_tag="QF480_05200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009227220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HJN05991.1"
                     /translation="MELKIISWNVNGIRALQKKGLNEIVDSLNTDILCIQETKAQDDQ
                     VNTVLFDSGFHFTSNSAVRKGYSGTAILSKSQPHRIVADIGIEEHDQEGRVLTAEYNE
                     FYLVNVYVPNSGSELVRLDYRKNWDADLLSYLKALEETKPVILCGDLNVAHQPIDLAN
                     PKSNYNKTAGYTQVEIDGFNNIISSGFVDTFRMKYPTKIAYSWWSYRFNARARNIGWR
                     IDYFLVSPDIVKNVTDAFILPDVIGSDHCPVGIGLKF"
     gene            1845..3329
                     /locus_tag="QF480_05205"
     CDS             1845..3329
                     /locus_tag="QF480_05205"
                     /inference="COORDINATES: protein motif:HMM:NF012880.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent dehydrogenase
                     E1 component subunit alpha"
                     /protein_id="HJN05992.1"
                     /translation="MKKLTSLTDVNNLTKEEVLSDYRIANESRQASLLGRREVLTGKA
                     KFGIFGDGKEIPQLAMARAFKNGDWRSGYYRDQTFMLATGMMTLEEVFSQLYGDTDPN
                     ANRANGGRLMNNHFATRSLDENGNWLNLVVQKNSSADSSPTASQMPRLLGLALASKQF
                     KQNKELNEFKDFSNKGNEVAFGTIGDASTSEGHFFETINAAGVMQVPMAISIWDDGWG
                     ISVPNKQQTTKSNISEILSGFEKLKGTNGFYIFRGKCYDYASLVDLYSQGIALCRKEH
                     TPVLFHIRECTQPQGHSTSGSHERYKTKEQLIHEKEIDCIVKMRQWIINEAIASESEL
                     DEIENEATKRARQARKNAWNNYLKPIISKKEEFLNLVDITTCNCTEKSEIEAIKQELI
                     KIGEPIYKDIISSAKKILRLICDSCSNPHNSLKINVTNWLKKEMDINERRYSSHLYSE
                     SKLSALNITSIEPVYSNDSKYVPGREILRDNFDYIFIDWFTNFY"
BASE COUNT         1141 a          553 c          637 g         1079 t
ORIGIN      
        1 ctgaaagcaa tcattttcta acaggattga tgggtgtaat cccagttagt gaaactattt
       61 tttcgagtat gaatataact ctatatgctg ctttcttagt gcttatccca tcaacatttc
      121 tcctactttc aaggataaag gcaaacaact ttacagatca attagattta cctgaagcag
      181 caccaatctt actttctcaa agtagaaggc aatatttggg ttttgcgcta ggaattgtca
      241 tagcctttat atctgtctac cagttttatt tatatggttt gtctgcttta aatatcaatt
      301 taatcaactt tattttacta tcgttgggcc taatattgta tgctaatatt gaacaattta
      361 tgaaagctgt aacttccgcc atctcttcat caagcggaat catgattcag tttccaattt
      421 atgctggaat catgggatta atgaaatgtt ccggattggc agatgtgttt acgcaaagcc
      481 taatatctgt ttcttctcct atagccctgc caatttatgg atttttaagt gcagctgtca
      541 taaatttctt tgtgccaagt ggtggtggac aatgggcagt acagggtcct attttggtag
      601 aagctgccca acagctgggt gtttcagttc caaaaacaat tatgggactt gcttatggtg
      661 atcagcttac taatatgatt caaccttttt gggccattcc gctactcgca attactggtg
      721 ttaaagccaa gtcaatctta ccttatactt ttgtaattat gattgtgggc ggtatcgctt
      781 ctgttattgc actttatata ttttgatgct ttcgaaatta gtccaataaa caataaatcc
      841 caataaaaac taaatttgca acattaagta aaaacggaaa aaatggaact caaaataatt
      901 tcatggaatg ttaatgggat acgggctctt caaaagaagg gtcttaacga aatagttgat
      961 agccttaata ctgacattct ttgtattcaa gaaactaaag cacaagatga tcaggtgaat
     1021 actgttctat tcgattcagg atttcatttt acaagtaact ctgctgttag aaaaggatat
     1081 tctggaactg caatattaag taaatcacaa ccccacagga ttgtagcaga tattggaatt
     1141 gaagagcatg atcaggaagg acgagtgtta acagccgaat acaatgaatt ttatcttgtt
     1201 aatgtttacg tgccaaactc tggttccgaa ttagttcgtc ttgattacag aaaaaattgg
     1261 gatgctgatc ttctttcata cttaaaggca ttggaagaaa caaaaccggt catcttatgc
     1321 ggtgacttaa atgtagctca tcagccaatc gatcttgcaa atccgaaaag taattacaat
     1381 aaaacagcag gatatacaca ggttgaaatt gatggtttca acaatattat aagcagcgga
     1441 tttgttgaca cttttcggat gaaatatccc acaaagattg cttatagttg gtggagttac
     1501 cgatttaatg caagagcaag gaacattggc tggaggattg attatttttt agtaagtccg
     1561 gatattgtaa aaaatgtaac tgatgctttt atactacctg atgttatcgg ttccgaccac
     1621 tgccctgtgg ggattggcct caaattctaa ttgaattgtt atttagaatc atttttaatt
     1681 acctttgcaa attcgaaatt tttagcatat ttactgataa acctgactat attcgatcga
     1741 aattttttta gctgaaagtt ttgaaaagga acgttcaagt tgatactgga gtctgtagaa
     1801 tcgatatgta attgaaccgt taaagcttaa taactattaa tacattgaaa aaattaacta
     1861 gtctgacgga tgtcaataat ttgacaaagg aagaagtgtt aagcgactat cgaattgcaa
     1921 acgaaagtcg tcaggcaagt ttattgggaa gacgtgaagt attaacaggt aaagcaaaat
     1981 ttggaatttt tggtgatggg aaagaaatcc cacagcttgc aatggcccgg gcctttaaaa
     2041 acggagattg gcgttctggg tactaccgcg atcaaacttt tatgcttgca actggaatga
     2101 tgacattaga agaagttttt tcacagttgt atggtgatac agaccctaat gcaaaccgag
     2161 ccaatggtgg ccgtttaatg aataaccatt ttgcaactcg aagcctagat gaaaatggga
     2221 attggcttaa tttagtagta caaaagaatt cttcagcaga ctcttcaccc actgccagtc
     2281 aaatgcctcg tttattggga cttgcacttg cttctaaaca gtttaaacaa aataaggagc
     2341 ttaacgaatt taaggatttt agtaataaag gaaatgaagt tgcattcggc acaattggcg
     2401 atgcttctac ctcagaaggc catttctttg aaactataaa tgcagcaggt gtaatgcagg
     2461 ttcctatggc aatatccata tgggatgatg gttggggtat ttccgtgcct aataaacaac
     2521 aaacaacaaa aagtaatatt agcgaaatcc tttctggctt tgaaaaacta aaaggcacta
     2581 atggttttta tatatttaga ggaaaatgtt atgattacgc atcattagtt gatttataca
     2641 gtcaagggat tgcactttgt cgaaaggaac acacgcctgt gttatttcat attcgcgaat
     2701 gtacgcagcc acaaggtcat tcaacatcag gatcacacga aaggtataaa acgaaagaac
     2761 aactaataca tgaaaaagaa attgattgta ttgttaaaat gcgtcaatgg attatcaatg
     2821 aagctattgc atctgaatct gagcttgatg aaattgaaaa cgaagctaca aaaagagcac
     2881 gtcaagccag aaagaatgct tggaataatt acttaaaacc tataatatcc aaaaaagaag
     2941 agttcctgaa tcttgttgat attacaacat gtaattgtac agaaaaaagt gaaatagagg
     3001 ctatcaaaca agagttaata aaaattggtg aaccaatcta taaagatata atatcttcag
     3061 caaagaaaat tctacgactt atttgtgata gttgcagtaa tcctcataac tcactaaaaa
     3121 ttaatgttac aaattggttg aagaaagaaa tggatatcaa cgagcgccga tacagttcac
     3181 atctatatag tgagtcgaaa ctatcagcat taaatattac tagtattgaa ccagtatatt
     3241 ctaatgattc taaatatgtg ccgggcagag aaatacttag agacaatttt gattatatct
     3301 ttatagattg gttcaccaat ttttattaac tcttgtttga tagcctctat ttcacttttt
     3361 tctgtacaat tacatgttgt aatatcaaca agattcagga actcttcttt
//
LOCUS       DASCQP010000308         9347 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001150724, whole genome shotgun sequence.
ACCESSION   DASCQP010000308 DASCQP010000000
VERSION     DASCQP010000308.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 9347)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9347)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9347
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001150724"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..363)
                     /gene="eno"
                     /locus_tag="QF480_05210"
     CDS             complement(<1..363)
                     /gene="eno"
                     /locus_tag="QF480_05210"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000103948.1"
                     /note="catalyzes the formation of phosphoenolpyruvate from
                     2-phospho-D-glycerate in glycolysis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HJN05993.1"
                     /translation="MSQITNIHGRQILDSRGNPTVEVDVYTSSGIVGRAAVPSGASTG
                     IHEAVELRDKDADTFLGKGVLKAVQNVNNILSEELNGYYVTDQVEIDHRMIELDGTPN
                     KASLGANAVIGVSMAVAHA"
     gene            complement(842..1294)
                     /gene="rplQ"
                     /locus_tag="QF480_05215"
                     /pseudo
     CDS             complement(842..1294)
                     /gene="rplQ"
                     /locus_tag="QF480_05215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005873882.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0005762 - mitochondrial large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
     gene            complement(1300..2292)
                     /locus_tag="QF480_05220"
     CDS             complement(1300..2292)
                     /locus_tag="QF480_05220"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018109216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HJN05994.1"
                     /translation="MAILAFQKPDKVLMNEADEFHGIFEFRPLEPGFGITIGNALRRI
                     LLSSLEGFAITSVKVDGVFHEFSTVKGVVEDITEIVLNLKKIRFKRQIQSENSEKVNI
                     IIGDQEVFNAGEINKFLSVFQVLNPEEVICHLDPSVKLSMELTISKGRGYVAAEENVD
                     EDALVGEIAIDSIHTPIKNVKYHVENFRVEQKTDYEKLVFDIITDGSIHPKEALKEAA
                     KILIHHFMLFSDERITLETEEKSVNEEFDENTLHVRQLLKSKLVDLDLSVRALNCLKA
                     ADVETLGELVAYNRNDLLKFRNFGKKSLTELDQLVEQKGLEFGMNTAKFKLDKE"
     gene            complement(2336..2941)
                     /gene="rpsD"
                     /locus_tag="QF480_05225"
     CDS             complement(2336..2941)
                     /gene="rpsD"
                     /locus_tag="QF480_05225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018359678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HJN05995.1"
                     /translation="MARYIGPKSKIARKFNDPIYGPDKFLEKNAFPPGQQGANKRRKK
                     QSEYGIQLQEKQKAKYTYGILERQFRNIFKLASRKKGITGENLLKLIEARLDNTVYRL
                     GVAPTRSGARQLVSHRHITVNGNVVSIPSYSLKEGDTIGVREKSKSMIVISESLEHPH
                     KSFSWLEWDSEKLMGKFLNYPPREEIPENIKEQLIVELYSK"
     gene            complement(2973..3362)
                     /gene="rpsK"
                     /locus_tag="QF480_05230"
     CDS             complement(2973..3362)
                     /gene="rpsK"
                     /locus_tag="QF480_05230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005634781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HJN05996.1"
                     /translation="MAQRTRSTKKRVVKVEPIGRAYIKASFNNIIISLTNNAGQVISW
                     ASAGKMGFRGSKKNTPYAAQMAATECSKVAYDLGLRKVKVYVKGPGSGRESAIRTIHS
                     SGIEVTEIVDVTPMPHNGCRPPKRRRV"
     gene            complement(3400..3780)
                     /gene="rpsM"
                     /locus_tag="QF480_05235"
     CDS             complement(3400..3780)
                     /gene="rpsM"
                     /locus_tag="QF480_05235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009125149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HJN05997.1"
                     /translation="MMARIAGVDIPNKKRGEIALTYIYGIGRSSAQKILTEAGVDWNI
                     KAEDWTDDQQNDVRNVITESFKVEGELRSETQMNIKRLMDIGTYRGIRHRLGLPLRGQ
                     NTKNNARTRKGRKKTVANKKMAVK"
     gene            complement(3813..3929)
                     /gene="rpmJ"
                     /locus_tag="QF480_05240"
     CDS             complement(3813..3929)
                     /gene="rpmJ"
                     /locus_tag="QF480_05240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014790280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HJN05998.1"
                     /translation="MKIRASIKKRTPEDKLVRRKGKLYIINKKNPKYKQRQG"
     gene            complement(4033..4251)
                     /gene="infA"
                     /locus_tag="QF480_05245"
     CDS             complement(4033..4251)
                     /gene="infA"
                     /locus_tag="QF480_05245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017185218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HJN05999.1"
                     /translation="MAKQKSIELDGTVIESLGNAMFRVELENGHKITAHISGKMRMHY
                     IKILPGDKVKLEMSPYDLSKGRITFRYK"
     gene            complement(4260..5036)
                     /gene="map"
                     /locus_tag="QF480_05250"
     CDS             complement(4260..5036)
                     /gene="map"
                     /locus_tag="QF480_05250"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005844893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HJN06000.1"
                     /translation="MIYIKTDEEVELQRKSSLLVGKTLAEVAKIIRPGVTTIELDKVA
                     ETFIRDNGAEPGFKGYGGFPATLCISINEEVVHGIPGNREFQDGDIVSIDCGTLMNGF
                     YGDSAYTFAVGEVDEKVLLLLEITKQSLYLGIEQAIVGKRVGDIGHAIQKYVEGFGYS
                     VVRDLVGHGVGRNLHEKPEIPNYGRRGSGIKLKSGMCLAIEPMINLGVKEVVQDTDGW
                     TIRTEDSQPSAHFEHDVVVRSGNADVLSTFEYIEQVLNNK"
     gene            complement(5052..6410)
                     /gene="secY"
                     /locus_tag="QF480_05255"
     CDS             complement(5052..6410)
                     /gene="secY"
                     /locus_tag="QF480_05255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019245974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HJN06001.1"
                     /translation="MKKLIETIRNINKIEELRNRILYTLGIILIYRLGSFIVLPGVDP
                     NMLANLKQQGSGGLMGLLNMFSGGAFSNASIFALGIMPYISASIVIQLLGMAIPYFQR
                     LQREGESGRRKINQITRYLTVTIVGLQAPGYIANLVSQVPAEAITPFSAAVTSPSIFF
                     WVSSTIILIAGTLFVMWLGEKITDKGIGNGISLIIMIGIIAQLPSSLVQEFVSKMGSL
                     GGGLVYFLIELVILVFVILFTILLVQGTRRVPVQYAKRIVGNKQYGGVRQYLPLKVNS
                     AGVMPIIFAQAIMFLPITLVGFAESDAMTGFASAFADYTGFWYNLTFFIMIILFTYFY
                     TAITINPKQMADDLKKNGGFIPGIKPGKRTAEYLDNILSRITLPGSIFLGFIAIMPAF
                     AMIAGVNSGFAQFYGGTSLLILVGVVLDTLQQIESYLLMRHYDGLTKSGRIKGKSATF
                     NM"
     gene            complement(6417..6863)
                     /gene="rplO"
                     /locus_tag="QF480_05260"
     CDS             complement(6417..6863)
                     /gene="rplO"
                     /locus_tag="QF480_05260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018667878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HJN06002.1"
                     /translation="MDLSNLKPAEGSTKNKKRIGRGQGSGRGGTSTKGHKGAQSRSGY
                     KRKLGFEGGQMPLYRRVPKFGFKNINRIEYRGVNLHDLQELVDKKKITTIDIDALIEN
                     GLAKKNDLIKILGMGELNAKLEVKAHGFTKTAQTAIESQGGTVTKI"
     gene            complement(6876..7055)
                     /gene="rpmD"
                     /locus_tag="QF480_05265"
     CDS             complement(6876..7055)
                     /gene="rpmD"
                     /locus_tag="QF480_05265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009859531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HJN06003.1"
                     /translation="MKKVRIIQTRSAINRPKRQKLTLEALGIKKLNRPKEHVLTPQVA
                     GMIDKVKHLLKVEEI"
     gene            complement(7075..7593)
                     /gene="rpsE"
                     /locus_tag="QF480_05270"
     CDS             complement(7075..7593)
                     /gene="rpsE"
                     /locus_tag="QF480_05270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015547063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HJN06004.1"
                     /translation="MTNANIKRVKSSDIEFKDRLVSIQRVTKVTKGGRTFSFSAIVVV
                     GNENGVVGYGLGKAKEVTSAIAKGIDDAKKHLVKVPVLKGTLPHQQIGKYSGARVYIQ
                     PAAPGTGVIAGGAMRAVLESVGVKDVLAKSKGSSNPHSVVKATIDALTKMRDPYTVAQ
                     VRNIELDTVFNG"
     gene            complement(7600..7962)
                     /gene="rplR"
                     /locus_tag="QF480_05275"
     CDS             complement(7600..7962)
                     /gene="rplR"
                     /locus_tag="QF480_05275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005656518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HJN06005.1"
                     /translation="MGIKNKKAYSRLRIKRRIRKTIVGTSERPRMSVFRSNKQIYVQL
                     IDDSNGTILIAASSREKDSKTEKVNKVDQAKFVGTSIAEKAKTAGIENVVFDRNGYLY
                     HGRIKSLAEAARKGGLKF"
     gene            complement(8002..8559)
                     /gene="rplF"
                     /locus_tag="QF480_05280"
     CDS             complement(8002..8559)
                     /gene="rplF"
                     /locus_tag="QF480_05280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008862844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HJN06006.1"
                     /translation="MSRIGKIPITLPQDVEINITDTNLVKVKGKLGELEQLVDPAITV
                     KVDDGSIIVERATDKKDHKAKHGLYRALISNMIKGVTEGYTIVQELVGVGYKAEAKGQ
                     LLDLSLGYSHHVFLQLPSEVKIETVSERGKNPLIKLFSIDKQLIGQVAAKIRSQRKPE
                     PYKGKGIKFQGEVLRKKAGKAAAEK"
     gene            complement(8577..8972)
                     /gene="rpsH"
                     /locus_tag="QF480_05285"
     CDS             complement(8577..8972)
                     /gene="rpsH"
                     /locus_tag="QF480_05285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005782213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HJN06007.1"
                     /translation="MTDPIADYLTRIRNAVAAKHRMVEVPSSNLSKNITKILFEKGYI
                     LNYKFEEDKVQGKIKIALKYHPVTKLPAIVELERISKPGLRKYVNANELPRVLNGLGV
                     AVLSTSKGVITDKEARKLGVGGEVICHVS"
     gene            complement(9000..9269)
                     /gene="rpsN"
                     /locus_tag="QF480_05290"
     CDS             complement(9000..9269)
                     /gene="rpsN"
                     /locus_tag="QF480_05290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004296337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HJN06008.1"
                     /translation="MAKESMKARERKRQRMVEKYAKKRAALKAAGDYEALQKLPRNAS
                     PVRLHNRCQLTGRPKGYMRQFGISRINFREMALKGLIPGIKKTSW"
BASE COUNT         2661 a         1979 c         1337 g         3370 t
ORIGIN      
        1 cgcatgagca acagccattg aaactcctat tacggcattt gctccaagac tagctttatt
       61 aggggttcca tctagttcaa tcattctgtg gtcaatctca acctggtcag ttacataata
      121 tccgttcagt tcttcagaaa gtatattatt tacattttgt acagccttaa gaacaccttt
      181 accaagaaaa gtgtccgcat ccttatccct gagctctact gcttcatgaa ttccagttga
      241 ggcacctgag ggaaccgctg ctctaccaac tattccgctt gacgtataaa catcaacctc
      301 aacagtgggg ttgccacgcg aatccaagat ctgtcttcca tgtatatttg ttatttggct
      361 catattctca ggcttaaaga tttgattggc gaaattacaa tttttttaat tagacggatt
      421 tgcgtagacc tttcatttct tcaacaatac cataaaataa aaaaggataa gagaaaatct
      481 cctatcctat ttataattct aaaaaaaatg aaatcgattc ctcttaatct tctttctttt
      541 cgtcttcttt attacttttt ttcttggcag tctttggcgt agcttttttc ttttctttct
      601 tcacatcttc aacagcttct ttaacttctt ccactacttc ctcagtaatg gcatcttctg
      661 cgacttcgtc cgtgactttc tcttccacta cttcttctat tgtaacatct tcagccactt
      721 tctctacaat tgcatctccc acagctatat cttctgctac ttcatctgta actttctctt
      781 caactacatc ttccattgct acctcttctg gtactatatc ctcaaccaca tcggttgcaa
      841 cagcttcaac attagattca gatgttttct tttttgaacc tcctctacga cgtcttgttg
      901 attttgcttt tttagctgta tcgctcatca acaattcgtt ataatcaaca agttctatca
      961 ttgccatttc agcattatcg cctagccgtt ttccaagctt aattattctt gtgtaaccac
     1021 ctggacgatc agcaactttt cctgaaatat ttctaaataa ttcagttaca gcaaatttat
     1081 ctttcaaata gctaaaaaca atccttcgcg aatgagttgt atcgtctttt gactttgtaa
     1141 tcaaaggttc aacataacct cttagggctt tagctttagc aacagtagta ttaattcttt
     1201 tgtgtaaaat caacgaagat gccatatttg agagcatagc tttcctatgt gaagatgttc
     1261 ttcctaaatg attaaaactc tttctgtgtc tcatctcaat tactccttat ctaatttaaa
     1321 ttttgctgta ttcataccaa actcaagacc cttttgctct acaagttgat caagctcagt
     1381 aagagatttt ttaccaaagt tcctaaactt cagcaaatcg tttctattat atgctacaag
     1441 ttcgcccaat gtttcaacat ctgcagcttt caaacagtta agtgccctca ctgataaatc
     1501 gaggtcaaca agttttgact taagcaactg acgaacatgt aaagtatttt catcaaattc
     1561 ttcattaact gacttctctt cagtttcgag tgtaattctc tcgtctgaaa agagcataaa
     1621 atgatgaata agaatttttg ctgcctcttt caaagcttct tttggatgaa ttgaaccatc
     1681 agttattata tcaaaaacga gcttttcata gtcagttttt tgctcaactc tgaaattctc
     1741 tacatgatat tttacatttt taattggtgt atgaatagag tcaattgcta tttcaccaac
     1801 taatgcatcc tcatcaacat tttcttcagc ggcaacataa cctctacctt tgctaatagt
     1861 taattccata cttaacttta ctgaaggatc gaggtgacaa ataacttcct caggattaag
     1921 cacctgaaaa actgataaaa atttattaat ctccccagca ttaaatactt cctgatcgcc
     1981 tataatgata tttacttttt cactattttc actttgaatt tgtcgtttaa agcgtatctt
     2041 tttaagattt aaaacaatct cggttatatc ttcaacgaca cctttaactg tagaaaactc
     2101 atgaaaaact ccatctactt ttacagatgt aatggcaaat ccttcaagag aggataataa
     2161 aattcgtctg agggcattac ctatagttat accgaaacca ggttccagag gtcggaattc
     2221 aaaaattcca tggaactcat cggcttcatt cattagtacc ttatcgggct tctgaaatgc
     2281 taatattgcc ataatttatc tttaacttta aaatgtttaa ttaatttatt agttactatt
     2341 ttgagtatag ttcaactata agttgttcct taatattctc aggaatttct tcacgtggtg
     2401 gataattaag gaatttaccc attagttttt cagaatccca ctcgagccaa gaaaagctct
     2461 tatgtgggtg ttcaagagat tcagaaataa caatcatact ttttgatttc tctctaacac
     2521 caatagtgtc tccttctttg agagagtatg acggtatgct cacaacgttt ccattaactg
     2581 ttatatgacg atgtgagact aactggcgtg cacctgatct ggttggcgca acacctaaac
     2641 gataaactgt attatcaaga cgagcttcaa ttaattttag aagattctca ccagtaatac
     2701 cttttttacg agaagcaagc ttgaaaatgt tacgaaactg tctttcaagt attccataag
     2761 tgtatttagc tttttgtttt tcctgaagct ggattccgta ttcagattgt ttttttcttc
     2821 ttttattggc accttgttgt cccggtggga atgcattttt ttcaagaaac ttatccggcc
     2881 cgtaaatcgg atcattaaat ttacgtgcga ttttggattt tggtcctata tatcttgcca
     2941 tagcttagat tttttgtcaa ttcttaatag agttatactc ttcttctttt tggtggacgg
     3001 caaccattat gtggcatagg ggttacatct acaatttcag ttacttcaat tccggatgaa
     3061 tggatcgttc taatagctga ttcccttccc gaacctggtc ctttaacata aaccttaact
     3121 ttgcgcaggc ctaagtcgta tgcaactttt gaacattcag tagctgccat ctgtgcagca
     3181 taaggagtat tcttttttga acctctaaac cccatttttc cagcagatgc ccatgaaatt
     3241 acctgaccag cattatttgt taaagaaata ataatattat taaaagaggc cttaatatag
     3301 gctctaccaa ttggttcaac cttaacaact cttttttttg tacttctagt tctttgtgcc
     3361 atattattct tattactaga ctcttaattg attattttat tatttaactg ccattttttt
     3421 attagcaaca gtttttttac gtcccttacg agttcttgca ttattttttg tgttttgacc
     3481 tctaaggggt aatcccagac gatgcctgat acctcgataa gttccaatat ccattaatcg
     3541 cttaatgttc atttgagttt ccgaacgcaa ttcaccttca actttgaaac tttcggttat
     3601 tacgttacga acatcatttt gctgatcatc tgtccagtct tctgctttga tattccagtc
     3661 gacaccagct tcggttaaaa ttttttgagc ggagcttctt ccaattccat aaatgtaggt
     3721 caaagctatt tctcctctct ttttgtttgg gatatctact ccagcaattc tagccataat
     3781 tattattttt attaagttaa aacattaaca agttaccctt gtctttgttt atacttagga
     3841 ttctttttat taataatgta caatttacct ttccgacgaa caagtttgtc ttcaggtgtt
     3901 ctctttttta ttgatgctct tattttcatg ttaaatattt tttcttatca gtcaactgta
     3961 actctctcaa ataattatca tttcttgtat ttaccgaatg atgatttatt catgtttgct
     4021 acaatgaaat atctatttgt acctaaatgt tattctacct tttgataaat catacggcga
     4081 catttctaat ttcactttat cacccggcaa tattttaata taatgcattc tcattttacc
     4141 agaaatatgg gcagttattt tgtgtccatt ttcaagctca acacgaaaca ttgcatttcc
     4201 gagagattca atcaccgtac catcaagttc aattgacttc tgctttgcca tattattgac
     4261 tatttattat ttaatacctg ctcaatatat tcaaatgttg ataaaacatc agcattacca
     4321 cttctaacaa caacatcatg ttcgaaatgt gcagatggtt gtgaatcctc agtacgtatc
     4381 gtccatccat cagtgtcctg aaccacttct ttaacgccta agttaatcat aggttcaatt
     4441 gctaaacaca ttcctgattt taactttatc cccgatcctc tgcgtccata gttaggaatt
     4501 tcaggctttt catgcaaatt tctgccaaca ccatgtccca ctaaatctct cacaaccgaa
     4561 taaccaaatc cttcaacata tttttgaatg gcatgtccga tatctccaac tctttttcct
     4621 acaattgcct gctcaattcc taaataaagt gattgcttcg ttatttcaag aagcaaaagc
     4681 actttttcgt caacttcacc aacagcaaat gtatatgcag aatcaccata aaatccattc
     4741 atcaaagttc cacaatcaat agatacgatg tcaccatctt gaaactcacg attccctgga
     4801 ataccatgta caacttcttc atttattgat atacacagtg tagcaggaaa accgccatat
     4861 cctttaaacc caggttctgc accattatca cgaataaaag tctctgcaac tttatctagt
     4921 tcaatggtag ttacaccagg cctaataatt ttggccactt cggctaatgt ttttccaaca
     4981 agtaaagaac tctttctttg taattctact tcctcatctg ttttaatgta aatcatcaaa
     5041 cggaaataaa attacatatt aaatgtagct gacttaccct taatccggcc cgacttagtc
     5101 agtccatcat aatggcgcat cagtaaataa ctttcaattt gttgtagagt gtcgagaaca
     5161 acacctacaa gaattaataa tgacgtacct ccataaaact gagcaaaccc actgtttact
     5221 ccagcaatca tagcaaatgc gggcatgatt gcaataaacc caagaaatat tgatcctggt
     5281 aatgtgatgc gtgataagat attatccaag tattctgctg tcctttttcc tggttttatt
     5341 ccaggtataa atccaccgtt cttcttcaaa tcatcggcca tctgctttgg atttatagta
     5401 atagccgtat aaaagtaagt aaacaatata atcattataa agaaggtaag attataccaa
     5461 aaccctgtgt aatctgcaaa ggcagatgca aaaccagtca tagcatctga ctctgcaaaa
     5521 ccaactaatg ttattgggag gaacataatt gcctgtgcaa aaatgatcgg cataacacct
     5581 gctgaattta ctttcagagg tagatactgt cgaactcctc catactgctt gttgccaact
     5641 attctttttg catactgcac aggtactctt cttgttcctt gaactagcag tatcgtaaac
     5701 agtataacaa aaactaatat cacaagttcg atcaaaaagt aaactaatcc acctcccagt
     5761 gaacccatct ttgatacaaa ctcctgcact aaagaactgg ggagctgtgc aataatacca
     5821 atcataataa taagtgatat accgttacct atgcccttat cagttatttt ttcgcctagc
     5881 cacattacaa acaatgttcc agctattaaa ataatagttg atgaaaccca aaagaaaatc
     5941 gatggagagg taaccgctgc actaaaaggt gtgatagctt cagctggtac ctgcgacaca
     6001 agattagcaa tatatcctgg agcttgtagt ccaacaatgg taactgttag atacctagtt
     6061 atttgattaa tcttgcgtct tccactttca ccttcacgtt gcagtctctg aaaataaggt
     6121 attgccattc cgagaagctg aataacaata gaagcagaga tatatggcat tataccgaga
     6181 gcgaaaattg atgcgttaga aaatgcacca ccagagaaca tgttcaataa tcccattaat
     6241 ccgcccgaac cttgctgttt aaggttggct agcatattgg gatcaactcc tggtaatact
     6301 ataaatgatc ctaaacgata gatcaaaata ataccgagtg tataaagaat tctattcctt
     6361 aattcctcaa tcttatttat atttcttatg gtttcgatta actttttcat ccaattttag
     6421 attttagtaa cagtaccgcc ctgagattca atggctgtct gtgctgtttt tgtaaaacca
     6481 tgggctttaa cttcaagttt agcattgagc tcacccatac ccaatatttt aatcaggtca
     6541 ttttttttgg ctaacccatt ttcaataaga gcatctatat caattgttgt tatttttttc
     6601 ttatcaacca actcttgaag atcatgcaag ttaactcctc tatattctat ccgattaata
     6661 tttttaaaac caaattttgg aactcgacga tataatggca tctgaccacc ttcaaatcct
     6721 aatttacgtt tgtagcctga tcttgattga gctcctttat gaccttttgt ggaagtacca
     6781 cctcgtccag agccttgtcc tcgtccaatt cgttttttgt tctttgtaga accttctgca
     6841 ggtttaagat tacttaaatc cattatttat atcttttata tttcttctac cttcaataaa
     6901 tgctttacct tatcaatcat gccagcaact tgtggtgtta gaacatgttc tttaggtcta
     6961 ttcagtttct taattcctaa agcctcaagt gttaacttct gccttttagg tctgtttatt
     7021 gcacttctag tttgtataat tcttactttc ttcataatgc caatttttta gcagctatcc
     7081 gttaaaaaca gtgtctaact caatatttct aacttgtgcg actgtatatg gatctctcat
     7141 ttttgttaaa gcatcaatag tagctttaac cacagaatga ggatttgatg atccttttga
     7201 tttagccagc acatctttta ctccaacgct ctcaagtact gcacgcattg ctccaccagc
     7261 aataacaccg gtacctggtg ctgcaggctg aatataaaca cgagcaccac tgtatttacc
     7321 aatttgctga tgcggcaatg ttccctttaa aaccggaact tttacaagat gtttcttagc
     7381 atcatcaata ccttttgcta ttgcagatgt tacctctttg gcttttccaa gtccataacc
     7441 aacaactcca ttttcgtttc ctacaacaac aattgcagaa aagctaaagg tacgaccacc
     7501 ttttgtaacc tttgttactc tttgaatact aaccagcctg tctttaaatt caatatcgct
     7561 ggatttgaca cgttttatat ttgcgtttgt catgatcttt taaaatttaa gtccaccttt
     7621 tcttgcagct tcagcaagtg atttaattct gccatgatat aaatatccat ttctatcaaa
     7681 aacaacattt tcaattcccg ctgtttttgc tttttctgct atacttgttc caacaaattt
     7741 tgcttggtca accttattaa ccttttcagt tttactatcc ttttcacgtg atgatgctgc
     7801 aataaggatt gtaccattac tatcatcgat aagctgaaca taaatttgct tattacttct
     7861 aaacacagac attcttggtc gttcagatgt acctactatg gtttttctga ttcttctttt
     7921 aattcgaagc ctactatatg cctttttatt ctttattccc atcactatta agttttacca
     7981 attatcagtt tcaatagtat attatttttc agctgcagct ttacctgctt ttttcctaag
     8041 tacctcaccc tgaaatttaa ttcctttacc tttataaggt tcaggtttac gctgtgaacg
     8101 aattttagca gccacctggc caattagttg tttgtcgatt gaaaatagtt taatcaacgg
     8161 gttctttcct ctttcagaaa ctgtttcaat ttttacttca gaaggcagtt gcagaaaaac
     8221 atggtgggaa tagcctaatg aaaggtctag caattgtcct ttcgcttcgg ctttataacc
     8281 aacacctact aattcctgaa cgattgtata tccttcagta acgcctttga tcatattaga
     8341 gattaaagct ctatataaac catgcttagc tttatgatct ttcttatctg tagctctttc
     8401 aactattatg ctcccatcat caacttttac agttattgca ggatcaacaa gttgctccag
     8461 ttcacctaat tttcccttaa ctttaacaag atttgtgtca gttatattaa tttcaacatc
     8521 ttgtggtaaa gtaatgggta tttttcctat acgtgacatt gtcttactcc ttctatttaa
     8581 cttacatgac aaataacttc gcctccaact ccaagtttcc ttgcttcttt atcggtaata
     8641 acaccttttg aagttgaaag tactgctaca ccaaggccgt ttagtacccg tggtaattca
     8701 tttgcattta catatttcct tagaccgggt ttcgatattc tctccagttc aacaatagct
     8761 ggcaatttag taacagggtg atattttaac gctatcttta tttttccctg taccttatct
     8821 tcctcaaact tatagtttaa gatatatcct ttctcaaaaa ggatcttagt aatattcttg
     8881 ctgaggtttg aagaaggtac ttctaccatt ctgtgtttcg cagcaacagc gtttctaatc
     8941 cttgttaaat aatctgcaat tggatcggtt atcatctgat taaacttttt ttttaattat
     9001 taccaactgg ttttttttat tcctggaatt aaccctttta atgccatctc gcgaaagtta
     9061 attcgagaaa taccaaactg tctcatatac cctttgggtc ttcctgttaa ctggcagcga
     9121 ttatgcaaac gcaccggaga agcattacgt ggcaactttt gtagagcctc ataatctcct
     9181 gcagctttca atgctgcgcg ttttttagca tatttttcta ccattctttg tctcttgcgc
     9241 tcacgcgctt tcattgattc ttttgccatg agctatgctt ttttttgatt tttaaatggc
     9301 aggccgaatg attgcagcaa cccaaacgct tctttatcag tatttgc
//
LOCUS       DASCQP010000309         2669 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001152119, whole genome shotgun sequence.
ACCESSION   DASCQP010000309 DASCQP010000000
VERSION     DASCQP010000309.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2669)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2669)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2669
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001152119"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(123..455)
                     /locus_tag="QF480_05295"
     CDS             complement(123..455)
                     /locus_tag="QF480_05295"
                     /inference="COORDINATES: protein motif:HMM:NF021362.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2061 domain-containing protein"
                     /protein_id="HJN06009.1"
                     /translation="MAKNKYPEIEKDSPYRSLFKAISWRFIASGSTFIISFTIFTQAT
                     ETAFKDILGAVSLITAIDIFSKLILYYFHERLWTNIVWGKYWRRRAIKRKIRKRKKEK
                     MNSINSSI"
     gene            complement(509..1309)
                     /locus_tag="QF480_05300"
     CDS             complement(509..1309)
                     /locus_tag="QF480_05300"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF012673.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008934 - inositol monophosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006020 - inositol metabolic process
                     [Evidence IEA];
                     GO_process: GO:0046855 - obsolete inositol phosphate
                     dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HJN06010.1"
                     /translation="MNLEIITKQVVNLTKAVGKFIKKEVDKLDSTDVEEKGIHNLVTY
                     VDKESEKILVRELGKIIPEAGFIAEEDSSLARSEKLNWVIDPLDGTTNFIHRVPLYAI
                     SIALMDKNEIILGVIYEINLNECFYAWKNSSAFLNGKEINVSKTINLNNSLLATGFPY
                     YDYSLLDPYLDLFKELMRTTRGVRRLGSAAVDLAYVACGRYDLFYEYGLQSWDVAAGS
                     LIVKQAGGMVSDFKNKNNYIFGKQIIASNKLTHNEFIRKLHHFFKGYL"
     gene            complement(1306..2466)
                     /locus_tag="QF480_05305"
     CDS             complement(1306..2466)
                     /locus_tag="QF480_05305"
                     /EC_number="2.4.99.-"
                     /inference="COORDINATES: protein motif:HMM:NF013915.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase family
                     protein"
                     /protein_id="HJN06011.1"
                     /translation="MYPRITDFINDVTGTDINLPIQSYGFFLALAFLVAALLLRHELA
                     RKEKDGLIKPTIKKILIGKPASLTELIITFLISLFVGYKIGGIIVYYKLAITDPQGYI
                     FSSDGSLIGGLIIAAGYTFYKYYIKDKGKLQEPELREIEIPAKDQVWSIVIIAVIFGI
                     LGAKLFHQLENMSEFIRDPIGSLLSLSGLTFYGGLIVAAIALIIFAEKHNIHWRQLAD
                     MVAPSLIIAYGIGRIGCQVAGDGDWGITNTLPQPGWLSFLPEWVWAYNYPHNILNQGI
                     PISGCAGPHCFELAEPVFPTPIYETTMSLVIFVILWSIRKKLIIPGSLFAIYLMFNGV
                     ERFLIEKIRVNNVFNFLGMKLTQAEIISTILFFTGLILLIVLYINQKKTTEA"
BASE COUNT          888 a          483 c          410 g          888 t
ORIGIN      
        1 tttatcaatt ttgaatcggt atactttggt tgattgatca cgctcaatag tatctgccgt
       61 taatgcaaag gatataaaat tcagaagaca tattattaaa attggtacag ttctagtacg
      121 tttcatattg atgagttgat actgttcatt ttctcttttt tgcgtttcct gattttgcgc
      181 tttatggccc gacgcctcca atacttaccc caaacaatat tcgtccacaa tctttcgtga
      241 aagtaatata gtattagttt ggaaaaaata tcaatagctg taattaatga tactgctcca
      301 aggatatctt tgaaagcagt ttctgtagcc tgagtaaata ttgtaaagct aattataaaa
      361 gtagaacccg aagctatgaa acgccagcta attgccttaa aaaggcttct gtatggacta
      421 tccttttcta tttcaggata tttatttttt gccataatta atttgtttac tagcttacaa
      481 ttatacaaaa aaatacttga ttatttccct aaagatatcc tttaaagaaa tgatgaagtt
      541 ttctaataaa ctcgttgtga gtaagcttat tagaagcaat tatctgcttt ccaaaaatat
      601 aattgttttt atttttaaag tcacttacca ttccaccagc ttgtttgacg atgagtgatc
      661 cagcagctac atcccacgat tgcagaccgt attcataaaa cagatcataa cgaccacagg
      721 caacataagc taaatcaact gctgcggatc ccaatctacg aactccacgg gttgtccgca
      781 tcagttcttt aaacaaatct aaatatggat cgagcaagga ataatcgtaa taaggaaagc
      841 ctgttgctag aagtgagtta ttcaagttaa tcgttttcga aacattaatt tcctttccgt
      901 ttaaaaaagc agagctattt ttccaagcat agaaacattc attcaagttt atttcgtaaa
      961 taacacccaa gataatttca ttcttatcca tcaatgcaat tgatatggcg taaagaggaa
     1021 cacggtgaat aaaatttgtt gttccgtcaa gtggatctat tacccagtta agcttttcgg
     1081 atctggctaa actgctatct tcttcagcaa taaatcctgc ttcaggaatt atcttaccca
     1141 attctctgac aagaattttc tctgattctt tatcaacata agtaacaaga ttatggatac
     1201 ctttctcttc aacatcagta ctgtcaagtt tgtcaacttc tttcttaata aatttgccta
     1261 ctgccttggt taggtttaca acttgttttg ttattatttc taagttcatg cttctgttgt
     1321 tttcttctga tttatataca aaacaatcaa taatattaga ccagtaaaaa agagtattgt
     1381 ggatattatt tcagcttggg ttaatttcat gccaagaaaa ttgaaaacat tgtttaccct
     1441 aatcttttca attaagaatc gttcgactcc attaaacatt aggtaaatgg caaaaagcga
     1501 acctggtatt attagttttt ttcttatgga ccagagtatg acaaagatca ctagtgacat
     1561 tgttgtttca taaattggtg ttggaaatac tggttccgct aactcaaaac aatggggacc
     1621 tgcacatcca gatattggaa taccttggtt caagatattg tgtggataat tatatgccca
     1681 tacccactca ggtaaaaaag acagccaccc gggctggggt aatgtattag taatacccca
     1741 atcaccgtct cctgcaacct ggcaaccaat tctaccaata ccataggcta ttattaatga
     1801 tggagcaacc atgtcagcca gttgccgcca atgtatgttg tgcttttctg caaatatgat
     1861 caaggcgata gcagcaacaa taagtcctcc atagaaagtt agcccactta atgataataa
     1921 tgaaccaatt ggatccctaa tgaactcgct catattttca agttggtgga ataatttcgc
     1981 tccgaggata ccaaaaatca cagcaataat aacaatagac cacacttgat ctttagctgg
     2041 aatttcaatt tctctcaact caggctcctg aagtttgccc ttatctttaa tataatattt
     2101 atagaaggta taaccagcag ctataataag accgcctatt aaagaaccgt ctgaagaaaa
     2161 aatatatcct tgaggatcag taatcgctag tttgtaataa actataatgc caccaatttt
     2221 ataacctaca aagagactta ttaaaaatgt tattattagt tcagttaagg atgccggttt
     2281 accaatcaat atttttttta ttgtaggttt tattaaaccg tccttttctt ttcgtgctaa
     2341 ttcatgtctt aacaatagag cagcaactaa aaacgccaaa gcaagaaaga atccatagct
     2401 ttggattgga aggttaatgt cagttccagt tacatcatta ataaaatcgg taattctagg
     2461 gtacatttaa tattatttta aaaaataaaa ataaagaaat tctcaatgac gaaactcacc
     2521 cattgtaagc tattaacttt tgtttatcct attttttaaa aactgttgaa ttaatattcc
     2581 cccgacaata aaaaatagcc caataaaagt agaaatatga attttttcgc caacggtata
     2641 tcttatgaaa aataatgcta taaatggtg
//
LOCUS       DASCQP010000310         1956 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001159222, whole genome shotgun sequence.
ACCESSION   DASCQP010000310 DASCQP010000000
VERSION     DASCQP010000310.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1956)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1956)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1956
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001159222"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            238..480
                     /locus_tag="QF480_05310"
     CDS             238..480
                     /locus_tag="QF480_05310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06012.1"
                     /translation="MKRYIKNKFLLVLLMVISVFMSCKQETKDAMVDNILLKEWTGPY
                     GGVPAFDLMKVEDVKDAHKVKINFFIAICFGINLFL"
     gene            complement(738..>1956)
                     /locus_tag="QF480_05315"
     CDS             complement(738..>1956)
                     /locus_tag="QF480_05315"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GEVED domain-containing protein"
                     /protein_id="HJN06013.1"
                     /translation="FTVGDTYDIIVTNGEPFDLDQCGVWIDWNVNEIFDNDEQTLMQS
                     IPGTDKFTGTISPLPGAISGITKMRIRITYTGELNPCGTTTFGEVEDYTVVVQGWLDI
                     YPLSGLVFPGDTNFVAVNFNAENLPEDTYSTTAVISSNDPLNSITEVPITLKTVHIAV
                     NAFVDFNEVCPGQFIHLTAQVPGIFDTLLFVWTSNPEGFTSDKARPISIPFVSTWYIV
                     EVSDGEHFSIDSVYVNVLPAPEVNLGPDTSLCGSTTWVLDAGNASIEYLWSTGGTTQT
                     IIIDTIDKGYGVQYIFVETIDSSGCAGYDEILVEFVNCTGIKEQNYFELGIYPNPNNG
                     KFYVKTDNIENGYFELKIIDLTGLPVYQNNRIQVSKSGVSFVNTGKLKDGIYLVILTD
                     NGNDFIQKMVVKN"
BASE COUNT          671 a          317 c          309 g          659 t
ORIGIN      
        1 tcaattaaaa aaataatacc atatctggta acaaaattat catactaaaa cagattgcgt
       61 aatagcttat ttctacgtaa ttataaatat ttgtacaaac agctatgctc tgagaaatta
      121 tgtagtattt ttagctttat atttactcgc taaatttagc ataatacaaa gtgtatttta
      181 aaagctgaac cattggcaaa gtatttttgt caatcatttt taattaaact taacacaatg
      241 aaaaggtata taaaaaacaa atttttactg gtcttattaa tggttataag tgtatttatg
      301 agttgtaaac aagaaacgaa ggacgctatg gttgataaca tattattaaa ggaatggaca
      361 ggaccatatg gcggcgtgcc tgcttttgac ctaatgaaag ttgaagatgt aaaagatgca
      421 cataaagtaa agattaattt tttcatagca atttgttttg gtattaattt gtttttatga
      481 gtatatgcaa aaaattatct tttacgaatt aaaagtgata tttgactggt taatagttaa
      541 ttgtgataat atgattaatt attacaaaga taaatatgac acattattgt tcaatgattt
      601 gcaagatata aataattagt gaattgacag cattttttaa cttcggaatg caatttgttt
      661 agtgacttat attgaatgca cttaaaatgg ccttgtattt acatcgacta attggagagg
      721 atttaaacat ataattgtta atttttcaca accatcttct gtatgaagtc attaccgtta
      781 tcagtcaaaa taaccagata gattccatct ttaagtttac ctgtattaac aaatgaaact
      841 cctgattttg atacctgaat acgattattt tgataaaccg gcaaaccggt cagatcaata
      901 atctttagtt caaaatatcc gttttcgata ttatctgttt taacataaaa tttaccatta
      961 tttggatttg gataaattcc taactcaaaa taattctgtt ccttaattcc tgtgcaattc
     1021 acaaattcca caagaatttc atcatatcca gcacaacccg atgagtcaat ggtttctaca
     1081 aaaatatatt gtacaccata tcctttatct attgtgtcaa taataattgt ttgagttgtg
     1141 ccgccggtcg accataggta ttctatacta gcatttccgg catctagtac ccaagttgta
     1201 gaaccacaaa ggcttgtatc ggggccaagg ttcacttctg gtgcaggaag cacattaaca
     1261 taaacagaat caattgaaaa atgttcacca tcagaaactt ctactatgta ccatgttgat
     1321 acaaaaggga tggaaatagg tcttgcctta tctgaagtaa atccttcagg gttcgaagtc
     1381 catacaaata ataatgtgtc gaatatacct ggaacctgag ctgttaagtg aataaactga
     1441 cctggacaca cttcattaaa atcaacgaaa gcattaacag caatatgaac tgttttaagc
     1501 gttatgggta cttcagttat actgttcaag ggatcattag aggaaataac tgcagttgtt
     1561 gaataagtat cttcaggtaa attttctgca ttgaaattaa cagctacaaa atttgtatct
     1621 ccgggaaata ctaaaccgct taaaggataa atatccagcc atccttgaac aactaccgta
     1681 taatcctcaa cctctccaaa ggtagtagtt ccgcatggat ttagttctcc ggtatatgtt
     1741 attcgaatcc tcatcttggt tataccacta atagctcctg ggagaggtga tattgtacct
     1801 gtgaatttgt cagtaccagg tatactttgc atcaatgttt gttcatcatt atcaaatatc
     1861 tcatttacgt tccagtcgat ccatacgccg cattggtcta agtcaaaggg ttccccgttg
     1921 gtaacaataa tatcataagt atcaccaact gtaaat
//
LOCUS       DASCQP010000311         3531 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001160577, whole genome shotgun sequence.
ACCESSION   DASCQP010000311 DASCQP010000000
VERSION     DASCQP010000311.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3531)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3531)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3531
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001160577"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(390..1277)
                     /locus_tag="QF480_05320"
     CDS             complement(390..1277)
                     /locus_tag="QF480_05320"
                     /inference="COORDINATES: protein motif:HMM:NF024762.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase-like domain-containing protein"
                     /protein_id="HJN06014.1"
                     /translation="MGEIKELNALVSLMDEPNEIMFSEIRNKVMSFGKLAIPILEEAW
                     VNTMADHDSERIKNLINEIRQKEFVLDFNAWIKNSNKNLIEGLILLTRYLNPDFDEDY
                     YTAQFEKLVRETWLEINDSLTALEKIKVVNHVIYGVYKFSGQIGPTVKSETYFISKVF
                     DYKMGNSLSMGILYIAVAQSLNIPVFGVNLQGHFILAYMDDLNDIRLPDKYSESDILF
                     YINPVNKGAIFTRNEINNFIVQMKIATKPEFFLPCTNQVVIRRMISELIISFEKENNH
                     SKTETLNRLLSFMTKTTKE"
     gene            complement(1472..2767)
                     /gene="tyrS"
                     /locus_tag="QF480_05325"
     CDS             complement(1472..2767)
                     /gene="tyrS"
                     /locus_tag="QF480_05325"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019130321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004831 - tyrosine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006437 - tyrosyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HJN06015.1"
                     /translation="MRNFVEELRWRGMVHDVTNGTEEQLLNETTSGYVGIDPTANSLH
                     IGHLVGVMMLVHLQLSGHRPIALVGGATGMIGDPSGKSQERNLLTEESLRKNEDALKN
                     QLSKFLNFKSGDNRALMVNNYDWMKSFNFLDFIRDIGKHITVNYMMAKDSVKKRISTD
                     SKSGMSFTEFSYQLVQGYDFLHLFQNENCKLQMGGSDQWGNIVTGIELIRRKLGFEQN
                     AYAITCPLITKADGSKFGKTESGNVWLDPEKTSPYEFYQFWLNVSDEDAEKYIKIFTL
                     LSKEVIDQLLVKHEKEPHLRLLQKKLAKDITCRVHSEEEYNSAIEASQILFGKGTTEM
                     LRNMNEKMLLSVFKGVPQTVVSREEFDRGIGLLNFLSDIVGAFKSNGEARRMIKENAV
                     LVNKTRINESFKLTQDSLLNNKYVLVQKGKKHYFLVKVV"
     gene            2935..>3531
                     /locus_tag="QF480_05330"
     CDS             2935..>3531
                     /locus_tag="QF480_05330"
                     /inference="COORDINATES: protein motif:HMM:NF014051.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HJN06016.1"
                     /translation="MQKKFLKNLGLLLFLNLMVKPMWILGVDRQVQNVVGTQEYGLYF
                     TIINFSFLFYIFLDLGITNFNNRNIAQNNQLLNKHLAGISMLKLVLGVLYAIIIFGIG
                     FLWGYKGRELYLLAWVGFNQFILSFILYIRSNLSGLLLFKTDSFISVLDRMLMILICG
                     FLLWFNFFEGLFTIEWFVYSQTAAYLITLIVAIVAVINK"
BASE COUNT         1117 a          640 c          525 g         1249 t
ORIGIN      
        1 tcaattaaaa aaataatacc atatctggta acaaaattat catactaaaa cagattgcgt
       61 aatagcttat ttctacgtaa ttataaatat ttgtacaaac agctatgctc tgagaaatta
      121 tgtagtattt ttagctttaa ccaaaaattg agcagagtca gtgttataaa tagggggggg
      181 tgtatgtatt tgttatacag ctatttataa ttttcttgcg gttattttga aaactaaata
      241 tacaactatc agcaatatta tggagcatag gttaggtgct ttattatatt gtagttgcct
      301 caaagataat aaaaatcaga tataaaaagc acgaaggact aaacatgaat caggtgctat
      361 tttattcaaa ctctttctta cctgcctgtc tactccttcg ttgtttttgt cataaatgag
      421 agcaacctgt taagggtttc agtttttgaa tgattgtttt ctttttcaaa cgaaataatc
      481 agttcactta tcatccttct tattacaacc tggtttgtac acggcagaaa gaactccggt
      541 ttagtggcta ttttcatttg aactataaag ttattaatct catttcgagt aaatatagca
      601 cctttattaa cgggattaat ataaaacaga atatcggatt cactgtattt atcgggtaag
      661 cgtatgtcat ttaagtcatc catataagct agtatgaaat gaccctgcaa attaactcca
      721 aagacaggga tgttaaggct ctgggcaaca gcgatgtaaa gaattcccat gcttaatgag
      781 tttcccattt tataatcaaa cactttgctt ataaaataag tttctgattt tacggttggg
      841 cctatctgtc cgctaaattt ataaacacca taaataacat gattaacaac ttttatcttc
      901 tcaagtgcag tgagactgtc gtttatttcc aaccaggttt ctctaacaag tttttcaaac
      961 tgagctgtat aataatcctc atcaaaatca ggatttagat accttgtaag aagaattaat
     1021 ccttctatta aattcttatt gctattttta atccatgcat taaaatccaa cacaaactct
     1081 ttctgtcgaa tttcattgat aagattttta attcgttcgg aatcatgatc tgccatggtg
     1141 ttaacccatg cctcctcgag gattggaatg gctagtttac cgaaactcat tactttgttt
     1201 cgaatttcgc tgaacataat ctcattgggc tcatccatta ggcttaccaa tgcgttaagc
     1261 tcttttattt cacccacatg cgacatatct tatattcaat catacagcaa taaaaatact
     1321 tcattacctt atctgtttaa tattaatagc aggaaattag tcacagcaga ttgttagtaa
     1381 ctaacaatga gaatacacaa agaatgaggc tatacctggc ttactctcga tatattagaa
     1441 tctccttgag aaaattatag gataaataga attatactac cttaacaaga aaatagtgtt
     1501 tttttccctt ctgaaccaga acatatttgt tatttaacaa gctatcctga gttagtttaa
     1561 aactttcatt tattcttgtt ttattgacta aaactgcgtt ctctttgatc atcctgcgcg
     1621 cctcaccatt agatttgaaa gcacctacta tatctgacaa gaaattgaga aggcctattc
     1681 ctctatcaaa ttcctctctg gaaaccaccg tttgaggaac tcctttaaaa acacttagta
     1741 acattttttc attcatattt ctaagcatct cggtcgttcc tttaccaaac aatatttgcg
     1801 aagcttctat agcagaatta tattcttctt cggaatgaac ccgacatgta atatctttag
     1861 ccagtttttt ttggagtaac cttagatgcg gttctttttc atgcttaacg agaagttgat
     1921 ctataacttc ctttgagagc aatgtgaaaa ttttaatata tttctccgca tcttcatcag
     1981 acacatttag ccaaaactga taaaactcgt atggcgatgt tttctccgga tctaaccaaa
     2041 catttccgct ttctgttttc ccaaactttg aaccatcagc tttcgtaatc aatgggcaag
     2101 ttattgcgta tgcattttgc tcaaatccta actttcgtct gattaattca ataccagtca
     2161 caatatttcc ccactggtca gagccaccca tctgaagttt acaattctca ttttgaaaca
     2221 aatgcagaaa atcataaccc tgtaccagct gatatgaaaa ctcagtaaag gacattcctg
     2281 acttactgtc agtgcttatc cgttttttaa cagaatcctt tgccatcatg taattaacag
     2341 taatatgctt gccaatatcg cgaatgaaat ccagaaaatt aaatgatttc atccaatcat
     2401 agttattaac catcaaagct ctgttatcac cacttttaaa attgagaaat tttgacaatt
     2461 gattttttag tgcatcttcg tttttacgta atgattcctc agtaagcaag ttacgttctt
     2521 gtgatttccc agaaggatct ccaatcatac cagttgcacc acctaccagt gcaataggac
     2581 gatgccccga tagttgcagg tgcactaaca tcattacacc aacaagatgc cctatatgta
     2641 aggagttggc agttggatcg attccaacat aacctgatgt agtttcattc aataattgtt
     2701 cttcggttcc gtttgtaaca tcatgaacca ttccacgcca tcgaagctcc tcaacaaaat
     2761 ttctcatttt aattacatta ataaattatg agcaaagata tataatagat cattgaatat
     2821 ttataattac taattgatta tttatcgtaa actaataatt aactcactgt ctgaattttg
     2881 aaattttaaa attaaacttt aaacattaat cctgaaaccg ttacctttgt actaatgcaa
     2941 aagaaatttt taaagaatct cggtctgcta ctttttctta acctaatggt caaaccaatg
     3001 tggattttgg gtgtggatcg gcaggtacaa aatgttgtag gaactcagga atacggactg
     3061 tactttacta tcatcaactt ttcattctta ttttatattt ttctcgatct tggaattact
     3121 aatttcaaca atcgcaatat tgcccaaaac aatcagctgc taaacaaaca tctcgccgga
     3181 ataagtatgc ttaaattagt gctaggtgtt ctatatgcaa taataatttt tggtattggt
     3241 tttctctggg gttataaagg cagggaacta tatttattgg catgggtagg gttcaaccaa
     3301 tttatcttat cattcatttt gtatatcaga tctaatttat ctgggttact attatttaaa
     3361 actgacagtt ttatttcagt gttagatagg atgctcatga ttttaatttg tggattttta
     3421 ttatggttta acttctttga gggtctcttc acaattgaat ggtttgttta ttcccaaaca
     3481 gcagcatatt taattacatt aattgtggca atagttgctg taattaataa a
//
LOCUS       DASCQP010000312         5813 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001161670, whole genome shotgun sequence.
ACCESSION   DASCQP010000312 DASCQP010000000
VERSION     DASCQP010000312.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 5813)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5813)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5813
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001161670"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1422
                     /locus_tag="QF480_05335"
     CDS             <1..1422
                     /locus_tag="QF480_05335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018074770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HJN06017.1"
                     /translation="IKNLKIMYCDGKNVFDSMNTMAEAKEHAIKKSEPVIVQANCTRI
                     HSHSNSDAHELYRDENERHCVKLSDPLVRFRIQLVHSGKFTEDNLNNLDKEAKKTISA
                     AHKKALVAPNPNPKSIYKFVTPEPYVSKLYPDGLHDGAKGESMRLIQALNETLKSEFH
                     HNPDTYIFGQDMANKDKGGIFNVSKGMQQEFGISRVFNAPIAEDFILGTANGMTRFNE
                     KIRVVIEGAEFADYFWPAMEQLVDSSHDYWRSNGQFAPNVTIRLASGGYIGGGLYHSQ
                     NIEGALTTFPGLRVVYPAFADDAAGLLRTSIRSRGLTLFLEPKALYNDPKAETKVPDD
                     FEVPFGKARIRREGQDLSVITYGNTLPMCLSVADKIKEELNKDIEVIDLRSLLPLDED
                     TIIKSVKKTNRVLVVHEDKVFGGIGGEVAAIISDKAFSYLDAPVKRVGAKFTPIGFNR
                     ILEEAILPDVEKILDGMKEVLEF"
     gene            complement(1427..2137)
                     /locus_tag="QF480_05340"
     CDS             complement(1427..2137)
                     /locus_tag="QF480_05340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06018.1"
                     /translation="MLGKHFNLTGGFTFTHFSNGATRVPNMGINLVAPRVGIKYQFKS
                     RKEFIINEIPTYSYKWEYIALIAGSSKQLGFMVDDNLDTTYVAETYGIFTFSTGVNRQ
                     ISYKVKFGAGLDFSYDGSYNSYISYENNKTTARLNAGNGNKLAIGAYGSFELVVNKLS
                     VVIQPGWYIYREEWKVPETASEGISIPRRKPGGSYQRIGLKYHILNNVFAGINVRAYN
                     FSIADYIEWNIGYRIMWK"
     gene            complement(2149..2646)
                     /locus_tag="QF480_05345"
     CDS             complement(2149..2646)
                     /locus_tag="QF480_05345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06019.1"
                     /translation="MKKVNILLILIAIISFSGYASDSTNIKKDRYNKSLRFFYQAGKV
                     LPTNDFLKGDNKSGKPIDYFQSFSLQYGIETDGRKLWQQLYGYPTWGFAFYTVNFFNP
                     DELGTPSAIYTFINAPIIKRFNRWSINYEVGFGLTYNWKPFDLKTNPYQYAIGSYNTA
                     SLMPD"
     gene            2938..3534
                     /locus_tag="QF480_05350"
     CDS             2938..3534
                     /locus_tag="QF480_05350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06020.1"
                     /translation="MKSRFRLSLLKMTIFQKLLIGIIALLMLNTIIAFVGIISINEFE
                     KTAYIMVEESQEQSAFQKLKLNVQQLLMPANDYLVHGNKVEKYNFEQLLTVVKAQIIE
                     CRELIGHEHEHVALNDFEKSLTVAEVLALEILKLESPIGNPEGAIIMEEMDAVTNEAI
                     KSIDEMLMVASLEMTEYINTNQATNIQALVLLFLWDCS"
     gene            3525..4355
                     /locus_tag="QF480_05355"
     CDS             3525..4355
                     /locus_tag="QF480_05355"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /protein_id="HJN06021.1"
                     /translation="MFIALCLVVGGFFYVKEITKPIKHLAQTAQKISSGDLSAKADVK
                     TRTRDEIDDYTKSFNNMIGVLEKTTVSRDYFNNILNRMVDTLIITEANGKIAIVNQAT
                     LDLLDYTEEEIIGQSIDKILSRESGEEILNSSNTYINVEEESVQNIFNTYYSKSGKAI
                     PVSFSRSIMHDNENKISGMICIAFNNTESLHEEQPSNGENSVNEARYIKAVGEIPLTK
                     RELEIIKLIAEELSNREIAEKLFISVRTIETHRKNIMQKLHTKSVIALVHYAAQNGII
                     "
     gene            4621..>5813
                     /locus_tag="QF480_05360"
     CDS             4621..>5813
                     /locus_tag="QF480_05360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06022.1"
                     /translation="MKSDKVSYLNRLTGVFILFILCMNTGFAQFDAYDVFDSKCVLCH
                     TIGMGDLKGPDLIGVTERRQQDWLIRFIQSSQSMIEAGDPVAVELFAKYNQTEMQDWD
                     YSEGEIIELLNYISTFSGSAVTDNEIVTDSASKDSKQILLDELNAIIEYYKDKKRKNI
                     SILDIETGEALFTGQLSFNNGAEVCVNCHNVIEIDTLNLNPSAFEIAQKYPDRIIDVS
                     KKPPSKIMRGVYKDHELDDLEIKYISYYLESISENGLTVKKKINFNKIIAFSLLFLLI
                     FSIVDLKFRKVIKLKQIHYAIILLVFVYFSNEVYLSAKNLSLSENYEPVQPIKFSHKI
                     HAGSNRINCIYCHSSVTESKIAGIPPANVCMNCHKAVKSGTISGKYEINKIYESINTN
                     TPIEW"
BASE COUNT         2039 a          878 c         1061 g         1835 t
ORIGIN      
        1 ataaagaatt tgaagataat gtattgtgac gggaaaaatg tattcgattc gatgaatacc
       61 atggcagagg ctaaggaaca tgcaattaaa aaaagcgaac cagttattgt tcaggcaaat
      121 tgtaccagga tccattcaca ttcaaactct gacgcacatg aattatatcg tgatgaaaat
      181 gagagacatt gcgttaaatt aagcgatcct ctcgtacgat ttagaattca gctggtacat
      241 tcaggaaaat ttactgaaga taatcttaat aatctcgata aagaggcgaa aaagactatt
      301 tcagcggctc ataaaaaggc attagtagca cccaatccta accccaaatc aatttataaa
      361 tttgttactc ccgaaccata tgtgagtaag ttatatcctg atggcttgca tgacggagcc
      421 aaaggcgaat caatgagact cattcaagcg ctaaatgaga ctcttaaatc cgaatttcat
      481 cataaccctg atacatacat ttttggacag gatatggcaa ataaggacaa aggagggatc
      541 tttaatgtaa gtaaagggat gcaacaggag tttggcataa gtcgtgtttt taatgcacca
      601 attgctgagg actttattct tggaacagca aatggaatga cacgtttcaa tgaaaaaata
      661 cgagttgtga tagaaggtgc tgaatttgct gattatttct ggcctgcaat ggaacagttg
      721 gttgatagct cacacgatta ttggcgtagt aacggccagt ttgcgccaaa tgttactatt
      781 cgacttgcgt cgggtggata tattgggggt gggctatatc actcacaaaa tattgaaggg
      841 gcattaacta ctttccctgg cttgcgagta gtttatcctg cttttgcaga tgatgctgca
      901 ggattattaa gaacctcaat acgatcaaga ggattaactt tatttctgga acctaaagca
      961 ttatacaacg atccgaaggc tgaaacaaaa gtacctgatg attttgaagt tcctttcggc
     1021 aaagcaagga taagaaggga aggacaagat ttgagtgtta ttacttatgg caatactctt
     1081 ccaatgtgtc ttagtgttgc tgataaaatt aaagaagaac ttaataagga tatagaagtc
     1141 attgatctaa gatcgttatt acccttggac gaagatacta ttatcaaatc agttaagaaa
     1201 acaaaccgcg tgcttgtggt tcatgaagat aaagtatttg ggggtattgg tggagaggtg
     1261 gctgcaataa tttccgataa ggcttttagt tatcttgatg ctcctgtaaa aagggtagga
     1321 gccaaattta ctccaattgg atttaataga atattagagg aagctatact gcctgatgtc
     1381 gagaaaatat tagatgggat gaaagaagtt cttgaatttt aacttattat ttccacataa
     1441 tacgatatcc aatattccat tcaatataat ctgcaatgga aaaattgtat gctcgtacat
     1501 taattccagc gaatacgtta tttaatatat gatatttaag tccaatacgt tggtatgatc
     1561 cacctggttt tcgtctggga atggatatac cttcagaagc tgtttcgggc actttccatt
     1621 cttctctgta tatataccat cccggttgaa ttactaccga taacttattt actactaatt
     1681 caaatgatcc atatgcacct atcgcaagtt tgttgccatt gccggcatta agacgcgcag
     1741 tggtcttatt gttttcataa cttatatatg aattataaga accatcataa ctgaagtcta
     1801 atcctgctcc gaactttacc ttgtacgaaa tctgtcggtt aacacccgtt gaaaatgtga
     1861 aaattccata tgtctcagct acataagttg tatcaaggtt atcatctacc ataaatccaa
     1921 gttgctttga agaacctgca attagtgcaa tatattccca cttataggaa tatgttggta
     1981 tctcatttat gataaactct ttacgtgatt taaattgata cttaatgcca acacgtggag
     2041 caactaggtt aattcccata ttaggaacac gcgtagcacc atttgagaaa tgcgtaaaag
     2101 taaatcctcc ggttaggtta aaatgcttcc caagcattat gttagctact aatccggcat
     2161 caatgaagca gtgttatatg agccaattgc atattggtat ggatttgttt tgagatcaaa
     2221 gggcttccaa ttgtaagtta gtccaaagcc aacctcataa ttaatactcc atctattaaa
     2281 ccgtttaata ataggtgcat taataaacgt ataaattgct gaaggtgtac ccaattcgtc
     2341 aggattgaaa aaatttactg tgtaaaatgc aaaaccccaa gtcggataac catataactg
     2401 ctgccaaagt tttctcccat ctgtttctat cccgtattga agcgaaaagc tctgaaagta
     2461 gtcaattggt ttgccacttt tattatcgcc tttaagaaaa tcattagttg gaagcacttt
     2521 cccagcctga taaaaaaacc ggagtgattt attatatcga tctttcttaa tgttagtact
     2581 gtctgatgca tatcctgaga aggaaattat tgcaatcagg attaatagaa tatttacttt
     2641 tttcatatgt acaatttact tgtcaaacat aacaataaat actgaaagtg taaactttaa
     2701 tatttaaatt ttgaagtaca atttacctta tcaatatatc atatttatca attcagctgt
     2761 ataaatactg ttaattgcat gggtatttag atggcatata atgagtaagt taggaaaaca
     2821 aattcgttgt tattgttaac tgaataattc acggtttaat tacttattca ttactagtta
     2881 ataccattgt gtatattagc aagaaaattg gatattattt gatcctaaat tcagcacatg
     2941 aaaagtagat ttcgattatc attattaaaa atgacaatct ttcaaaaatt gctgattgga
     3001 attattgctt tgttgatgct taatacaata atcgcttttg ttggtataat aagtatcaac
     3061 gaatttgaga aaactgcata cattatggtg gaggagtctc aggagcaaag tgcttttcaa
     3121 aaactgaaat tgaatgtcca gcagcttctt atgccggcaa atgattacct tgtacatgga
     3181 aacaaagttg agaagtacaa ttttgaacaa ttacttacag tagtaaaagc ccaaattatt
     3241 gaatgtcggg aacttattgg acatgaacat gaacatgtcg ctttaaatga ttttgaaaaa
     3301 agtcttactg tagcggaagt acttgcctta gaaattttaa aactggaaag tccaattggc
     3361 aatccagagg gggctattat aatggaggag atggatgccg tgactaatga agcaatcaag
     3421 agtattgatg aaatgttaat ggtagcatcg ttagaaatga cagaatacat taacacaaat
     3481 caagcaacaa atatccaggc actcgtgtta ttatttttgt gggattgttc atagcactat
     3541 gtttggtggt tggaggcttt ttttacgtaa aggagattac gaaaccgata aaacatttag
     3601 cacaaacagc tcaaaaaata tcatcaggtg atctatctgc taaagcagat gtaaagactc
     3661 gtacacgcga tgaaattgat gattatacaa agtcatttaa taatatgatt ggagttttgg
     3721 agaaaaccac tgtatctcga gattatttta ataatatcct taacaggatg gtagatacat
     3781 taattattac tgaagctaac ggtaaaattg caatagtaaa ccaagcaaca cttgatctac
     3841 tcgattatac ggaagaagaa attattggtc agtcaataga caagatatta tcaagggaaa
     3901 gtggtgaaga aattttaaat agcagcaata catacattaa cgtagaagaa gagtcagtac
     3961 aaaatatatt taatacctat tactcaaaat ctggtaaagc aataccagta tctttttccc
     4021 gatcaataat gcatgataat gaaaataaaa tatcaggaat gatatgtatt gcgtttaaca
     4081 atacggaaag tttgcacgaa gaacaaccat caaatggtga aaattcagtt aacgaagcaa
     4141 gatatataaa agctgtggga gaaattcctc taaccaaaag ggaattggaa atcataaaat
     4201 tgattgcgga ggagttaagc aatcgcgaaa ttgcggagaa gctgtttata agtgtcagaa
     4261 ctattgaaac tcacagaaag aatattatgc aaaaacttca cacaaaaagt gtaatcgccc
     4321 tagtccacta tgcggctcaa aacggaataa tatagtttac ccgataattc tccatttcgt
     4381 tttaatggca tttaatattt ttattttgca taattaaatt cttaattttt cataattttt
     4441 gcacaatact atattttttt ttttgttaaa gtaaattaat tttatagttt agctgccaat
     4501 ttaagaaaaa tggtacttaa aaggtgcgat taaataaaaa accactaatt atttttatga
     4561 taggatcgac tctattgaga attcataatt ctaacttcat taattaataa aaaagtaaaa
     4621 ttgaaatcag ataaggtaag ttatttaaac aggttaacag gggtatttat actttttatt
     4681 ttatgtatga ataccgggtt tgcccagttt gatgcctacg atgtgtttga tagtaaatgt
     4741 gtactttgcc ataccattgg tatgggtgat ctaaaaggac cagatctaat tggtgttacc
     4801 gaacgtcgtc aacaagattg gctaataaga tttattcaat catcccaatc aatgatagaa
     4861 gcaggcgacc cagtagcagt tgaactattt gctaaataca accaaactga aatgcaagac
     4921 tgggattatt cagaaggtga gattattgaa ttgttaaact atatttctac ctttagtgga
     4981 tcagcagtaa ctgataatga aattgtgaca gatagtgcta gtaaagatag taaacagata
     5041 ttgttggacg aactaaatgc aattatcgag tattataaag acaagaaaag aaaaaatatt
     5101 tcaatattag atattgaaac aggtgaggcc cttttcacag ggcaactttc atttaataat
     5161 ggtgcagaag tttgtgtgaa ttgtcataat gtgattgaaa ttgacacatt aaacctgaat
     5221 ccttctgctt ttgaaattgc acaaaaatat cctgatagaa taattgatgt atcgaaaaaa
     5281 ccaccctcga aaataatgag aggagtgtat aaggatcatg aacttgatga tttagagatt
     5341 aaatatatat cttattatct tgaatctata agtgaaaacg ggttaactgt taaaaagaaa
     5401 ataaatttta acaaaatcat tgctttttcg ttgttgtttt tgcttatttt ttctattgtt
     5461 gatctaaagt tcagaaaggt tatcaaatta aaacaaatac attacgcgat tattttgctt
     5521 gtatttgttt acttttcgaa cgaggtatat ttaagtgcca agaatttaag tttatcagag
     5581 aattatgagc ctgtacagcc cataaaattt tctcataaaa ttcatgccgg cagtaataga
     5641 attaattgca tttattgcca cagtagcgtt actgaaagta aaattgctgg tattccacct
     5701 gcaaatgttt gtatgaattg ccacaaagct gtgaagagtg gaacaatatc gggaaaatac
     5761 gagattaata aaatttatga atctataaac acaaatacac cgattgaatg gat
//
LOCUS       DASCQP010000313         4830 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001162522, whole genome shotgun sequence.
ACCESSION   DASCQP010000313 DASCQP010000000
VERSION     DASCQP010000313.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4830)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4830)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4830
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001162522"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..693)
                     /locus_tag="QF480_05365"
     CDS             complement(<1..693)
                     /locus_tag="QF480_05365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06023.1"
                     /translation="MRKILIAILILVVGLTTAEAKKKKDEEKKEGLTSSTFSGLKWRS
                     IGPAFVSGRIADFAVNPDDFSTYYVGVASGHIWKTTNNGITFKPVFDNHGTYAIGSLA
                     MDPNNSNVIWAGTGENNHQRALGYGNGIYKTTDGGSSWKNMGLKDSRQIGEILIDPRN
                     SNVVYIAAEGSAWGPGEERGVFKTVDGGESWEKVLFISENTGVANLSFEAGNPDVIYA
                     GAEQRRRRQFSKI"
     gene            complement(853..1491)
                     /locus_tag="QF480_05370"
     CDS             complement(853..1491)
                     /locus_tag="QF480_05370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06024.1"
                     /translation="MVAGCHNNCISFKTFYGFYLGNYFPTCSDVEDKKILTVILLLFW
                     LNIIAFSSAFGELIDDVITETGTIEVVNTMNIDATYLIIMAIILAFILYKIGMMNGKL
                     IKYSLYSQNLISIQLRIIFFVSILLIPWLLVVILSGLLRADFFSISLILTNLPAIILL
                     IPFLVREKPENLNFKYVSTNGSSISDLILVIFLIILSLVLILVMRNGIVILG"
     gene            complement(1816..2256)
                     /locus_tag="QF480_05375"
     CDS             complement(1816..2256)
                     /locus_tag="QF480_05375"
                     /EC_number="3.2.2.20"
                     /inference="COORDINATES: protein motif:HMM:NF015319.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008725 - DNA-3-methyladenine glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HJN06025.1"
                     /translation="MSITILILCYKDCFTSKIIRGFDAKIIAGYGEEKIAELLQNTGI
                     IRNQLKIKSTISNAKLFLTVQEEFGSFDKYIWQFTGGKTIINSWKNLVQIPASTKESD
                     AMSNDLKKRGFKFVGTTICYAFMQAAGIVNDHMVDCYRYKEVNQ"
     gene            complement(2256..3869)
                     /locus_tag="QF480_05380"
     CDS             complement(2256..3869)
                     /locus_tag="QF480_05380"
                     /inference="COORDINATES: protein motif:HMM:NF019581.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HJN06026.1"
                     /translation="MNSINKSQEQLFTNGTVYIDEERKANNIVVKSGKVSAIGVDPEK
                     YQNATIIDLKGAIAYPGFCDSHVHIVEVGIANGGIDLLNCATADEIAKKIAETINNIP
                     KGGLIIGLGFYPNDYLTWSLDDLAKIDKVTGERPVVLIDSLGHNCIINSASIAISKLT
                     SETPVPIGGKVVLQNGKPTGMLCESAMAVACNILFPLINDDLIKKGAEKTLAQWSSFG
                     YTSIVDLMGAPFGRLLKTNICRVMEKENTLPVRINYMYTFASLDEIDGSLSLKDSDTE
                     MVKYGGLKLFVDGAFAAGQAWTKDKNLVGNHGLYYVYTDDSYGKQYNLNRIVEKVNDI
                     GHNIHYHVQGDYAIDAVLNALDAAKAKKGKLTSIHTLIHIALPTNEQIERIKNFNGSV
                     VATVQPGFWEIEGETTKYYGNKANKCYPIKKIIDAGISTGMSTDFSVSPIELAAPSTI
                     MGIAMTGAGDPDNHPPLTMKSLIKGFTVGSAATTNDEGNYGKLDIGYNADIVVYNKDL
                     YTIAKDKLNKDNPKVISTWISGRKIYQSQ"
     gene            complement(3880..>4830)
                     /locus_tag="QF480_05385"
     CDS             complement(3880..>4830)
                     /locus_tag="QF480_05385"
                     /inference="COORDINATES: protein motif:HMM:NF019310.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJN06027.1"
                     /translation="LFAIAIVLITLGLINISVWNTTTIGASLITGLLFLIFFIWYESK
                     LEKRQETVLLPSVFIKSKQVRAGLIMTALIFFLTGGLSFVLVTYLQVVKEFNALHTGL
                     ILSINAIGIILFSIGTPMVIKNINPRKICQLSVLIAFFAALMLALSINSSSLGILFYS
                     SIFIAGAAAGLLSSQAGVIVTSGINEKYAAQSGGIQGSMRNIGCAIGIALVGLIMISS
                     LTHSIKHGILKDPITEKLITSKVKLTKTIPFVSDKQLKTFIDSKHYSDAEKKSLIKTN
                     TQSRITALQISFASFGGLILIFFIFTFQIPKSYKSIKNNI"
BASE COUNT         1601 a          894 c          712 g         1623 t
ORIGIN      
        1 aattttacta aactgacgac gtctacgctg ttcggctcct gcatagatta catcaggatt
       61 acctgcttcg aaactcaagt ttgcaactcc ggtattttca ctaatgaaaa gaaccttctc
      121 ccatgattca cccccatcaa cagttttaaa cactcctctt tcttcaccag ggccccatgc
      181 agaaccttca gctgctatgt acacaacatt tgaatttctc ggatcaatca ggatttcacc
      241 gatttgtcgt gaatctttta accccatgtt tttccatgag ctacctccat cagttgtctt
      301 atagatacca ttaccatagc caagtgcacg ttggtgatta ttttcacctg ttccggccca
      361 aatcacatta ctgttattgg gatccattgc caacgaacca attgcatatg taccatgatt
      421 gtcaaaaaca ggtttgaatg taataccatt gttagttgtt ttccaaatat gtcctgatgc
      481 aacgcccaca taatatgtgc tgaaatcatc aggattaact gcaaagtcgg caatgcgccc
      541 agaaacgaat gcagggccta tgcttctcca tttgagccca ctaaatgttg acgatgtcaa
      601 cccttccttt ttttcttcgt cttttttctt tttagcttct gcagttgtta gaccaacaac
      661 cagaattaaa atcgcaataa gtatttttct catgataaat tgttttttta aattgttgtt
      721 aaaaatataa aatttgaatt aaccaaaagc aatcaaagtc aattaaatag gctgctgggg
      781 atttaaggga ttaaaatgtt tttaactttc cgttgataca ttatcagaca agacactatc
      841 attcacaatc acctaaccca aaataacaat tccatttctc ataacaagta ttaaaaccag
      901 tgataatatt atcaaaaata tcactaaaat caagtcagat attgaagacc cattggtcga
      961 tacatattta aaatttaggt tttcaggttt ctctcttact aaaaatggta ttaataaaat
     1021 tattgctggc aaatttgtca agattagcga aatagaaaaa aaatcagctc ttaataaacc
     1081 tgaaagaata acaactaaca gccaagggat taatagtata gaaacaaaga aaattattcg
     1141 taattgtatc gaaatcaggt tttgagaata aagagagtac ttgatcagtt ttccattcat
     1201 cattccaatt ttataaagaa taaatgctaa aataatagcc attattatga gataagttgc
     1261 atcaatattc attgtattaa caacttcaat agtgccagtt tcagttatga catcatcaat
     1321 caattctcca aaagctgaac taaaagcaat gatgttaagc caaaatagca gaagaataac
     1381 tgttagaatt tttttgtcct cgacatcaga acaagtagga aaataattcc caagataaaa
     1441 gccgtaaaag gttttgaaag aaatacagtt attatggcat cccgcgacca actatggtcg
     1501 ataacattag gtgggaggct tacgcctaat agagaaaaag atgcagggat atcaaaatca
     1561 tatgcaaaaa atagaacaga ataatttgac aggaaaaaaa caatgtagta agcacagata
     1621 gctgatacag tcgaaataaa aaaagttttc caaagattag tataatcaga tttttcgacg
     1681 tctggtttta gcacaacaat ttgtataaat gaaaaattgt tctacaaata taagacactg
     1741 ttgtaatcaa cggctaacta atataaatta ggtaactgtt agaataacta attcagattt
     1801 gtttttagta gttttttatt gattaacttc tttatatctg taacaatcaa ccatatggtc
     1861 gttaacaatt ccagcagcct gcataaatgc ataacatatg gtcgttccaa cgaatttaaa
     1921 gccccgtttt tttaaatcat tactcatggc atctgactct tttgtgcttg caggaatttg
     1981 gacaagattt ttccagctat taataattgt tttcccaccc gtaaattgcc aaatatattt
     2041 atcgaaacta ccaaactcct cttgaacagt tagaaaaagt ttggcgttag aaatagtaga
     2101 ctttatctta agttgatttc tgattatacc agtattctgt aatagttcag caattttttc
     2161 ttcgccatat ccagcaatta tttttgcatc aaaaccacga ataattttag aagtgaaaca
     2221 atctttatag catagtatca aaattgtaat gctcattatt gtgattgata tatttttctc
     2281 ccactaatcc atgttgagat tacttttggg ttatctttat ttaatttatc tttagcaatt
     2341 gtgtataaat ctttattata cactactata tctgcattgt aaccaatatc aagttttcca
     2401 taattacctt catcgttagt tgttgcagca cttccaacag taaacccctt aatcaggctt
     2461 ttcattgtta atggtgggtg gttatctgga tcaccagctc ctgtcattgc tatacccatt
     2521 attgttgaag gagcagccaa ctcaattgga gatacactaa aatcagtact catgccagtg
     2581 gaaattcctg catcaataat tttttttata ggatagcact tattcgcctt atttccataa
     2641 tattttgttg tttcaccttc aatttcccaa aatcccggct gaactgtagc tacaacgctg
     2701 ccgttaaaat tcttaatacg ctcaatttgt tcatttgtag gcaaggcaat atgtataagt
     2761 gtatgaatgc tagttagttt gccttttttc gcttttgcag catccaaggc atttagtaca
     2821 gcatcaatgg cataatcgcc ttgtacatgg taatgtatgt tgtgtccaat atcgttaacc
     2881 ttttctacta ttctattaag gttatattgt ttaccatatg aatcatctgt gtaaacataa
     2941 tataagccat ggttgccaac caaattttta tctttagtcc atgcctgtcc tgcggcaaaa
     3001 gctccatcaa caaaaagttt taaaccacca tatttcacca tttcagtatc actatccttt
     3061 aaactcagtg aaccatcaat ttcgtcaaga ctagcaaaag tgtacatgta gtttattctt
     3121 actggtagtg tattttcctt ttccattact ctgcaaatat ttgtttttag caatctgcca
     3181 aatggagcac ccattaaatc aactattgag gtataaccaa atgaggacca ttgagcaaga
     3241 gttttttctg ctcctttttt gattaaatca tcattaataa gtgggaataa tatattgcat
     3301 gcaactgcca tggccgattc gcataacata ccagttggtt tcccattttg caaaacaacc
     3361 tttccgccaa ttggaaccgg tgtttctgat gttagtttag aaatagcaat ggaagctgaa
     3421 tttattatac aattatggcc taaagaatca atcaaaacaa caggtctttc tccagttact
     3481 ttatctattt ttgctaaatc atccaaagac caagttaaat agtcattagg ataaaaacca
     3541 agcccaatta ttagtccacc ctttggtata ttattgatag tttcagcaat ttttttcgca
     3601 atttcgtctg cagttgcaca attgagaagg tcaattccac cattggcgat acctacttct
     3661 actatatgta catggctgtc gcaaaaacca ggataagcta ttgccccttt taaatctata
     3721 attgtggcat tttgatattt ttcaggatct acacctattg cagatacttt accacttttt
     3781 actacaatat tattagcttt tcgctcttca tcaatataaa cggtgccatt tgtaaacaac
     3841 tgctcttgtg atttattaat actattcatt tggtatttat taaatgttat tttttatact
     3901 tttatatgac tttggtattt gaaatgtaaa tatgaaaaaa atcaatatca gacctccaaa
     3961 agatgcaaat gaaatttgaa gtgcagtaat acgactttga gtatttgttt tgattaaact
     4021 cttcttttca gcatcactat aatgtttact atcaatgaag gtttttagct gcttatcact
     4081 tacaaaagga attgtttttg taagtttaac tttacttgtt attagttttt cggtaatcgg
     4141 atctttaagt attccatgct taatactgtg ggttaaagac gaaatcataa tcaatccaac
     4201 taatgcaata ccaattgcac atccaatatt tcgcattgag ccctggatac cgcctgactg
     4261 agccgcgtac ttctcattta tacctgatgt aacaataact ccagcctgtg acgaaagaag
     4321 accagcagca gctccagcta taaaaatact agaataaaat aatataccta gtgatgatga
     4381 gttgatactt aaagcaagca ttaaagctgc aaaaaaagca atcaaaacgc tcagttgaca
     4441 aatttttcta gggttaatat ttttaattac cattggtgtt ccaattgaaa acaagatgat
     4501 accaatagca tttatagata atattaaacc cgtatgaaga gcattaaact ctttaactac
     4561 ttgtagatat gtaaccaata caaatgataa tcctcctgtc aagaaaaata ttagagcagt
     4621 cattattaac cctgctctta cctgtttaga ttttataaat acagaaggta atagaaccgt
     4681 ttcttgtcgc ttctcgagtt tagattcata ccagataaaa aatatcagga aaagcaatcc
     4741 agttattaat gacgccccaa ttgtagttgt attccaaaca cttatgttta tcaaccccag
     4801 cgttattaaa acaattgcga tagcaaaaag
//
LOCUS       DASCQP010000314         6564 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001163176, whole genome shotgun sequence.
ACCESSION   DASCQP010000314 DASCQP010000000
VERSION     DASCQP010000314.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 6564)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6564)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6564
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001163176"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(57..920)
                     /locus_tag="QF480_05390"
     CDS             complement(57..920)
                     /locus_tag="QF480_05390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004328839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HJN06028.1"
                     /translation="MRQLKITKQVTNRETASLDKYLQEIGKVDLITADQEVELARRIK
                     QGDRIALEKLTKANLRFVVSVSKQYQNQGLTLPDLINEGNLGLIKAAQRFDETRGFKF
                     ISYAVWWIRQSILQALAEQSRIVRLPLNKIGSINKINKASARLEQSFEREPNSKEIAG
                     ELEMTENEVKESQRNAGRHVSMDAPLIQDEDNTMYDVLRSDEAPTPETGLLYESLRKE
                     IDRAVQTSTQREADVVKLYFGLGEGHPMTLEEIGEKFDLTRERVRQIKEKAIRRLKHT
                     SRSKILKSYLG"
     gene            complement(985..3120)
                     /gene="pnp"
                     /locus_tag="QF480_05395"
     CDS             complement(985..3120)
                     /gene="pnp"
                     /locus_tag="QF480_05395"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005822256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004654 - polyribonucleotide
                     nucleotidyltransferase activity [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HJN06029.1"
                     /translation="MSINPISKSFDLGDGRTITLETGKLAKQADGSVVVKMGKTMLLA
                     TVVAASEAREDVDFMPLSVDYKEKYAAAGKFPGGFFKREARPSEYEIIISRLIDRALR
                     PLFPDDFHAETQMLVSLLSVEEDVAPDAMAALAASAALTVSDIPFNGPISEVRVARIN
                     GEFVVNPTISVLEEADIELIVAASIDNIMMVEGEMKEVTEAEMLEGIQVAHDAIKIQC
                     QAQIDLAEMVKESAAKREYNHEDNNEELKEKVKEATYKKCFEIALEGNADKHARSSAF
                     KAVRDEFLDTFSDEEKEVVTKLVKRYFHDVEKEAVRDAMLNKNVRLDGRQMNEIRPIW
                     TEIDYLPSTHGSAIFTRGETQALVTVTLGSKLNEQKIDGAVISGNRSFMLHYNFPPFS
                     TGEVKRMMGVSRREVGHGNLAERALKFVIPSDEDNPYTIRIVSDVLESNGSSSMASVC
                     GGTLALMDAGIKISKPVAGIAMGLISDNKTGKYVVLSDILGDEDHLGDMDFKVTGTAD
                     GITACQMDIKVDGLSHSILEEALEQARQGRIHILGEMAKTIKEPREDYKENAPRIEKM
                     IIDKEFIGAVIGPGGKVIQEIQNVTGATIVIEEADNKGIIDVMADNKTSIEEAKEWIA
                     GITAVPELNKTYLGTVKSIVAFGAFVEILPGKDGLLHISEIDHKRIENVEDVLKQGDK
                     IKVKLIGIDPRSGKLKLSRKALIDRPDKG"
     gene            complement(3213..3482)
                     /gene="rpsO"
                     /locus_tag="QF480_05400"
     CDS             complement(3213..3482)
                     /gene="rpsO"
                     /locus_tag="QF480_05400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007173151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HJN06030.1"
                     /translation="MYLSTEEKNKIFEKYGKGSTDTGSAEGQIALFTYRIKHLTGHLK
                     KNKKDLFTQRSLIRLVGKRRKLLDYLKEKDIERYRLIIKQLSLRK"
     gene            complement(3629..4873)
                     /locus_tag="QF480_05405"
     CDS             complement(3629..4873)
                     /locus_tag="QF480_05405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06031.1"
                     /translation="MKKIISIIFLICITLIFSVNANAQKKLRTTGFFEYLNNTWIPSN
                     MYQTFGFDDWQNQSTIYNRINIWWTPVDKLEFHAGIRNNFTFGPLVAQYNKFFDYTKL
                     VTYDDGYLDLTWKISSDNENVLYTNLDRLNFKWTQDKFELTIGRQRINWGTNLVWNPN
                     DIFNAFNYFDFNYIERPGSDAILLEYYTGDFSSIQLAGKLNYRQEVIDSLTLKKKFSL
                     TAAAMYKFNKWSYDFQFFGGMMQTDITAGMGWAGNIGGAGFTGEASWFRDIDNFTDTT
                     GIVVASISANYIFKNQLMASLSVIYNSNGSTDKAYKNNTEILGSFSTMFSSSLNVKNL
                     TPSRFDIFGQLSYPATPLINVSLSGMFNPYDKSAYIGPSTTFSLTDNISLLLIGQLFF
                     GDKLTEFGDYGKMFFLDLKWNF"
     gene            complement(4911..5606)
                     /locus_tag="QF480_05410"
     CDS             complement(4911..5606)
                     /locus_tag="QF480_05410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018339104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJN06032.1"
                     /translation="MNNVIEITRLTKIYNSSEVKVKAVNGIDINFKEGEFTAVVGPSG
                     SGKTTFLNMLGGLDRPTSGDVKIGGVNIWELSSRKLIDFRMNNIGFVFQSYNLIPVLT
                     AGENVEFIMQLQGKRKKEREQRTQELLDAVGIGDRVKSRPSKLSGGQQQRVAVARALA
                     SKPEFILADEPTANLDSKATSSLLELMSQINIKFNTTFIFATHDQRVMDKATRIVTIE
                     DGKILKDEYIERK"
     gene            complement(5713..6093)
                     /locus_tag="QF480_05415"
     CDS             complement(5713..6093)
                     /locus_tag="QF480_05415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013444582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four helix bundle protein"
                     /protein_id="HJN06033.1"
                     /translation="MKLVSFEELDCWKACRTVRNDVRIILKKFPIEEKYALTDNMRRA
                     SRSITENIAEGFGRFHYQENIQFCRITRGSLFELIDQYITAKDEQYISIEEYKKGIEL
                     LNKSIGLINGYINYLKKAKKNDNN"
     gene            complement(6149..>6564)
                     /locus_tag="QF480_05420"
     CDS             complement(6149..>6564)
                     /locus_tag="QF480_05420"
                     /inference="COORDINATES: protein motif:HMM:NF014717.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HJN06034.1"
                     /translation="FIIIILMALLFGIINTMLMVVMERTKEIGMLMAIGMNKIKVFSM
                     IVFESVMLSLTGGIVGIIIGAISAKFGETHPIDLSIWAQGYQQLGYDAFVYTSLDPEM
                     LINVTVLVILTGIIAAIYPAYKALKNDPADALRIE"
BASE COUNT         1904 a         1269 c         1017 g         2374 t
ORIGIN      
        1 atagtttttt tgcaaatata aaaaaagcgt cagcctgagg cggacgcttt gaatctttat
       61 ccgagataag attttaatat cttactcctt gaagtatgct ttagtcttct tatagctttt
      121 tcttttattt gtcgtactcg ttcccttgta aggtcgaact tttcacctat ttcttcaagc
      181 gtcatagggt gaccttcgcc aagtccgaaa taaagtttaa caacatcggc ttcacgttga
      241 gttgaagttt gaacagcacg atcgatttct tttcgtagcg attcatacaa taagcctgtt
      301 tcaggagttg gagcttcatc gctacgaagt acatcataca ttgtgttatc ttcatcctga
      361 attaaaggtg catccattga aacatgtcgg ccagcatttc tttgagattc ctttacttcg
      421 ttttcagtca tctccagttc gccagcaatc tcttttgaat ttggttctct ttcaaatgat
      481 tgttcaagcc tggcagaagc tttattaatt ttatttatgg aaccaatttt gtttaatggt
      541 agccttacaa ttcttgactg ctcagcaaga gcctgaagaa ttgattgcct gatccaccaa
      601 actgcgtagg aaataaattt aaatccacgt gtttcatcaa atcgttgagc agcttttatt
      661 agtcctaaat tgccttcatt aattaaatcg ggtaatgtaa ggccttgatt ttgatattgt
      721 ttagaaacag aaaccacaaa acgaaggttt gctttagtta atttttcaag agcaattcga
      781 tcaccctgct taattctcct tgcaagttca acttcctgat cagcagtaat taaatcaacc
      841 ttaccaattt cttgtaaata tttatcaagc gaggctgttt cgcgatttgt tacctgcttt
      901 gtgattttaa gttgcctcat aatgtaatga cttttttgct aaatcttata cgttattatt
      961 gttcaaaggt tactttgaaa aaccttagcc tttatcgggt ctgtcaataa gtgctttgcg
     1021 cgaaagtttt aattttcctg atcttggatc gatacctatg agctttactt ttattttatc
     1081 tccctgcttt agtacatctt caacattctc aattcgttta tgatctattt cagagatatg
     1141 taataatcca tctttgccag gtagtatctc aacgaaagct ccaaaagcga caatgctttt
     1201 aacagtgcca agataggttt tgtttaactc aggcactgca gttataccgg caatccattc
     1261 tttagcttct tcaattgaag ttttgttatc tgccataacg tcaataatac ctttattatc
     1321 agcttcttct attacaattg ttgctcccgt aacattttga atctcctgaa ttacttttcc
     1381 tccaggtcca ataactgcgc caataaattc tttatcgata atcatcttct caattcttgg
     1441 agcattctct ttatagtctt ctcgaggctc tttaattgtt tttgccatct cgccaagaat
     1501 atgaatcctt ccctgacgtg cctgctcaag cgcttcctct aaaatagaat gtgataaacc
     1561 atcaactttt atatccattt gacaagccgt gataccgtca gcagtacctg taactttaaa
     1621 gtccatatcg cctaagtggt cttcatcacc aagtatatca gatagaacaa catatttacc
     1681 ggttttattg tctgaaatca agcccattgc aatacctgca acaggttttg atattttaat
     1741 tccagcatcc attagcgcta aagttccgcc acatacagac gccattgaag aagatccatt
     1801 tgattcgaga acatctgaaa caatcctaat agtgtacgga ttatcttcgt cgctagggat
     1861 aacaaatttc aaagcacgtt ctgctaggtt accatggcca acttcccgtc tgcttacgcc
     1921 catcattctt tttacttcac ctgttgagaa tggtggaaaa ttataatgta acataaaact
     1981 acgattacct gaaattacag caccgtcaat tttttgctcg tttaatttac ttccaagtgt
     2041 tacagtaacc aaagcttgtg tttcaccacg agtaaaaata gctgaaccgt gagtagaagg
     2101 taggtaatca atttcggtcc atataggtct tatctcattc atttgtctac catctaatcg
     2161 gacattttta tttagcatag catcgcgaac ggcttccttt tcaacatcat gaaaatatct
     2221 tttaactaac tttgttacaa cttctttttc ttcgtcacta aaagtatcaa ggaattcatc
     2281 gcggacagct ttaaaagcac ttgatcttgc atgtttgtca gcatttcctt caagtgctat
     2341 ttcgaaacat tttttgtatg ttgcttcttt aactttttct tttaattctt cattgttgtc
     2401 ttcatgattg tattctcttt tagcagctga ttctttaacc atttctgcta aatcaatttg
     2461 tgcctggcat tgaatcttaa tagcatcatg tgcaacctgt attccttcaa gcatttctgc
     2521 ttcagttact tctttcattt ctccctcaac catcataata ttatctattg aggctgctac
     2581 tattaactca atatcagctt cttccagtac ggagatggta gggtttacaa caaactcacc
     2641 attaatcctt gctacacgca cctctgaaat aggaccatta aaaggaatgt cagaaacagt
     2701 aagtgctgca gaggctgcca aagcggccat tgcatcagga gctacatctt cctctacaga
     2761 taataatgag acaagcattt gagtttctgc atggaaatca tctggaaata atggacgtag
     2821 ggcacgatcg attaatcgag aaataataat ctcgtactca gatggtcttg cttcgcgttt
     2881 aaaaaatcct cctggaaatt ttccagctgc agcgtatttt tctttatagt caaccgataa
     2941 tggcataaag tcaacatctt ctcttgcttc agatgctgcg actacagttg caaggagcat
     3001 agttttgccc atttttacta caacagaacc atcagcttgt ttagcaagtt ttcctgtttc
     3061 gagagttatt gttcttccat ctccgagatc gaatgattta gatatagggt tgattgacat
     3121 aatatattgt gtattaataa tttgtgtgat tgataaaaca caaaaaaagg caatcggtaa
     3181 attgcctttt tttgtacaag ttatttaaac ttttatttcc ttagacttaa ttgcttgatt
     3241 attaaacgat atctttcgat atccttctct tttaaataat caagaagttt tcttcttttt
     3301 ccaaccagtc tgattagtga tctttgggta aacaagtctt ttttgttctt tttcaaatga
     3361 cccgtaaggt gcttaattct ataagtgaat aaggcaatct gaccttctgc tgaaccagtg
     3421 tcagtactgc ctttaccata tttttcaaaa atcttgtttt tctcttcagt acttaaatac
     3481 atatgatatt tcttttactc aaattttggg ctgcaaaaat agaaacttta tttaaaacaa
     3541 gcaacctttt actattttat tttatatcgc agaaattcta taaatcgtca atatatttct
     3601 tatttggttt tggatataaa ttattaaact aaaagttcca ttttaaatcg agaaagaaca
     3661 ttttcccata atcaccaaat tctgtgagtt tatctccaaa aaatagctga ccaattagca
     3721 ataaacttat attgtcggtt aaactaaaag ttgttgaagg tccaatgtat gcagatttat
     3781 catatggatt aaacattccg gagagactca cattaattaa cggtgttgcc ggataagaaa
     3841 gttgaccaaa aatatcgaaa cgtgaaggtg ttaggttttt tacgttgagg ctgcttgaaa
     3901 acatcgttga aaaagaacct aatatctctg tattgttttt ataggctttg tcagtagatc
     3961 cattactatt gtatataact gataaacttg ccattaattg atttttgaag atatagtttg
     4021 cactaattga tgctacaaca atgcctgtag tgtcagtaaa attgtcaatg tctctaaacc
     4081 agcttgcttc gcctgtaaaa cctgctcctc caatatttcc tgcccatccc atcccagctg
     4141 ttatatctgt ttgcatcatc ccaccaaaaa attgaaagtc ataactccat ttgttaaatt
     4201 tatacattgc agcagctgtc aagctaaatt tcttcttcag cgtcaacgaa tctattactt
     4261 cttgtcggta gtttaatttt ccggccaatt gtatagatga gaaatcgcca gtgtaatatt
     4321 ccagtaatat tgcatcactc ccaggacgtt ctatataatt gaaatcgaaa tagttgaaag
     4381 cattgaaaat atcgtttgga ttccaaacca gatttgtacc ccaattaatt ctttgccgcc
     4441 caatagtcag ttcaaatttg tcctgtgtcc atttgaagtt cagcctatca aggttggtat
     4501 aaagtacatt ttcgttatcg ctggagattt tccatgttaa atcaaggtag ccatcatcgt
     4561 aagttacaag tttggtataa tcaaaaaatt tgttgtattg agcgactagt ggtccaaagg
     4621 tgaagttgtt tcttattccg gcatgaaatt caagtttgtc aacaggtgtc caccaaatat
     4681 taattcggtt ataaattgta gattgatttt gccaatcatc gaacccaaat gtttgataca
     4741 tattactcgg aatccaagta ttgtttaagt attcaaaaaa acctgttgta cggagttttt
     4801 tctgtgcatt tgcattgact gagaaaatca atgttataca tattaagaat attatactaa
     4861 tgatcttttt catttaatta gtatatttca tacaaaagtc aatatgaatt ttatttcctt
     4921 tcaatgtact cgtcctttaa aatcttacca tcctcgatag taactatcct tgttgcttta
     4981 tccattaccc tttggtcgtg agttgcgaaa ataaatgtag tgttgaactt gatattaatt
     5041 tgagacataa gttcgagcaa actgctggtg gcttttgaat ctaagttcgc tgtaggttca
     5101 tcggctagga tgaattcagg ttttgatgca agggcccttg ctacggcaac tctttgttgc
     5161 tgtccgccgg acagttttga tggtcgactt ttaacacggt caccaattcc aactgcatcc
     5221 agaagttctt gggtccgctg ctcacgctcc tttttgcgtt ttccctgaag ctgcattata
     5281 aactcaacgt tttcgcctgc agttaataca ggtatcaggt tgtacgattg gaacacaaat
     5341 cctatattat tcattctgaa gtcgataagt ttccgagagc ttaattccca aatatttact
     5401 ccacctattt taacatcacc tgatgttggc ctgtcgagtc caccaagcat atttaagaag
     5461 gtagtttttc ctgatcctga tggaccaact acagctgtga attcaccttc tttaaaatta
     5521 atatcaattc cgtttacagc ttttactttt acctcgctgc tgttatagat ctttgtaagt
     5581 cttgttattt ctattacgtt gttcattgtt ttaatattat acgttatgtg ttgatatatt
     5641 gtaagttata tgttatacgt tatatgttga tatgttatag gttgctgcac atgactatga
     5701 ataaaatcgt tattaattat tatcattctt tttggctttt ttgaggtaat taatatagcc
     5761 attaattaaa ccaatggatt tattcaacaa ttctattcct tttttatatt cctcaataga
     5821 tatgtattgt tcatcttttg cagtaatata ttgatcaatt agttcaaata gtgatcctct
     5881 tgtgattcga caaaactgaa tattctcctg atagtgaaat ctcccaaaac cttcagctat
     5941 attctcagtt attgatcgtg aagctctcct catattatca gttaaagcat atttttcttc
     6001 aattggaaat tttttaagaa ttattctaac atcatttcta actgttctgc aagctttcca
     6061 acaatctaat tcttcaaaac tgactaattt cataatacct attgttcaat aacatttaac
     6121 ttataaccaa taactattca ctactaaatt attcgatcct caatgcatca gctggatcgt
     6181 ttttaagtgc tttataagcc ggataaatgg cagcaattat tccggttaat attactaaga
     6241 cggttacgtt tataagcatc tcaggatcaa gacttgtgta gacaaatgca tcataaccaa
     6301 gctgttgata gccctgagcc catatactta aatcgatagg atgagtttct ccaaattttg
     6361 cactaattgc tcctattata attccaacta ttccacctgt taatgatagc atgacagatt
     6421 caaaaactat catagagaat accttaattt tgttcatccc aattgccata agcatcccta
     6481 tttctttagt gcgctccatt actaccataa gcatagtatt tattatacca aatagtagcg
     6541 ccattagtat tatgattata aaaa
//
LOCUS       DASCQP010000315         4402 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001164322, whole genome shotgun sequence.
ACCESSION   DASCQP010000315 DASCQP010000000
VERSION     DASCQP010000315.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4402)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4402)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4402
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001164322"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..553)
                     /locus_tag="QF480_05425"
     CDS             complement(<1..553)
                     /locus_tag="QF480_05425"
                     /inference="COORDINATES: protein motif:HMM:NF020296.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA alkylation repair protein"
                     /protein_id="HJN06035.1"
                     /translation="MTTNEILKELESYGNEGTKKIFLRHGAREPFYGVKVQDLKKIVK
                     RVKKNHELSLELYATGNSDAMYLAGLIADENKISKSDLIRWAKEAYWYMISEYTVPWI
                     AAESKYGYELGLMWTESDKENIASSGWATLSNYASIVPNEELDIVRYSELLDRVEMNI
                     HNAKNRVRYTMNGFVIAIGSHIEE"
     gene            complement(761..1591)
                     /locus_tag="QF480_05430"
     CDS             complement(761..1591)
                     /locus_tag="QF480_05430"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024157.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HJN06036.1"
                     /translation="MIELEIKDYSKAVEALKKVQINNLFARAVVENHVSGKVYVDNPD
                     NPTTFYVVHPYGMSLLSGKHDNQDFNKAFKYHALNKNKTQNAHVWMQAYPEQWNVELK
                     TLFSNISIKSSENKTNQTTNIVELNTRVNFKFNHVKYTELKKKIKTTESSVIRTTEKE
                     FKSMRGSVIPSNFWNNANDFLINGIGFSTYSGNELACTAFTSFIVDNFLELGMETIPK
                     FRGRGFAQYTCSKLIDYCLENDYEPIWACRLENTGSYHLAEKLGFDVSIQIPYYRLSE
                     "
     gene            complement(1734..3350)
                     /locus_tag="QF480_05435"
     CDS             complement(1734..3350)
                     /locus_tag="QF480_05435"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN06037.1"
                     /translation="MKKLITLTLAIFFFVSMSNSQTFDWARSAGGGGSDQAYAIATDN
                     DGNSYVTGWFSGSAHFGDIVLTSTGDQDVFLAKYNDNGEALWAVKAYGPANNSAAGIT
                     LDWDDFPIITGWFAEAIHFDDIILESHGSYDMFVARYSSEGHVIWARSAGGEGDDYGN
                     RLTTNFEYDVIVSGSFRYTAHFGEETTITSEGNRDIFIANYSNTGNFHWVKKAGGEGE
                     DRAYGIICNDEGATYFTGVFNGKAFFGEHDIMSNSFLSTYIAKMDGGGNFLWVRRGTG
                     GANDYARGFGISMDNEGYVYGNGTFSGRLTFSEETVESTGGQYDFDAYLVRYNHEGAF
                     KWIRKAGGYGMDQGRDMFTDANGNTFTTGFFSNEAEFGDKVLESVGKSDIFIAKYNWT
                     GEVVWAKRAGGNYLDYGYGISPGNPQSLYICGNFQEDANFDDHEITGWGAFDMFIARL
                     DYESDFVNEFNSGGLSIYPNPSDGTFEINLNEQHKSITVKIFSADGRLVVEKQVADPQ
                     NRIEIKTDLVPGAYSVQILELDVSSKLIIK"
     gene            3530..4324
                     /locus_tag="QF480_05440"
     CDS             3530..4324
                     /locus_tag="QF480_05440"
                     /inference="COORDINATES: protein motif:HMM:NF015746.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015558 - secondary active
                     p-aminobenzoyl-glutamate transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1902604 - p-aminobenzoyl-glutamate
                     transmembrane transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AbgT family transporter"
                     /protein_id="HJN06038.1"
                     /translation="MDELKKRTGLLQKMLNWTERIGNALPHPGTLFALFALGTLVLSA
                     IGYALGWEVIHPGTKEVVKTVNLLSHDGIHRILLDMVDNFTGFAPLGIVMVAMLGIGI
                     AEQSGLISAIIRLLVLNAHRHLLTFIIVLAGILSNVASDVGYVLLIPLAGVIFVAVGR
                     NPIAGMAAAFAGVSGGFSANLVLGTVDPLLAGLSTEAAQILDPGYEVNPTANYYFMVA
                     STFVIAFAGTFVTEKIVEPRLGKYTGTIPESESSFGKLTKVEKKGL"
BASE COUNT         1274 a          879 c          721 g         1528 t
ORIGIN      
        1 attcttctat gtgacttcca attgcaatta caaagccgtt catcgtatat cgaactctgt
       61 ttttggcatt atggatgttc atttcaactc tatccagtag ttcactataa cgaacaatat
      121 cgagttcttc atttggcact attgatgcat aatttgaaag ggttgcccat ccagatgatg
      181 caatgttttc tttatcagat tcagtccaca ttaatcctaa ttcgtatcca tatttgcttt
      241 cagctgctat ccatggtact gtatactcac ttatcatata ccaatatgct tctttggccc
      301 accgaataag atcgcttttc gaaattttgt tttcatcagc aataagacca gccagataca
      361 tagcatccga atttcctgtt gcgtaaagtt caagagataa ttcatgattc ttttttactc
      421 tttttacaat tttcttaagg tcttggactt taacgccgta aaatggttct ctagctccat
      481 gtctaagaaa tatctttttt gttccttcat ttccatagct ttccagctct tttaatatct
      541 catttgttgt catcgtattg tctttctcaa ttattacatt tttaatttct cagataaagc
      601 aagccagatt aaatatttct actaagggtt tgaataaatg tcgtgtttaa tgcattttag
      661 gtcttgttgt gaatagctct atttttcaat gagaaccgct ttgtcaataa tgtttacctt
      721 tacgattggg ccatcaatat actgtggttg ttctctatga ttattcactc aatctgtaat
      781 atggtatttg tattgatacg tcaaacccaa gtttttctgc taaatgatat gacccagtat
      841 tttccaatcg acaagcccat ataggttcat aatcattctc taaacaataa tctataagtt
      901 tgctacaggt atattgggca aaacctcttc cacgaaactt tggaattgtt tccattccca
      961 attccaaaaa attgtccact ataaatgagg tgaatgcagt gcaagccaat tcatttcctg
     1021 aatacgtact gaatccgatt ccatttataa gaaagtcatt ggcattattc cagaaatttg
     1081 atggtattac agagcctcgc atagatttaa attctttctc ggttgtccta attacagaac
     1141 tttcggttgt ctttattttc tttttaagtt ctgtgtattt tacgtggttg aatttaaaat
     1201 ttaccctagt gtttagttct acgatattgg ttgtttggtt ggtcttattt tctgacgatt
     1261 taatagagat attcgaaaac aatgttttca attccacatt ccattgttca gggtaagcct
     1321 gcatccatac gtgggcattc tgtgttttat tcttgtttaa agcgtggtat ttaaaggctt
     1381 tgttaaaatc ttgattatcg tgtttgccgg atagcaagga cattccatat gggtgtacta
     1441 catagaaagt tgtgggatta tcagggttat ccacataaac ttttcctgat acatgatttt
     1501 caactacagc acgggcgaat aaattattta tctgcacttt tttcaatgct tcaacggctt
     1561 ttgaataatc tttaatttct aattctatca tttatgttta attcaaataa cacacaacga
     1621 gtgttattat aatattgtcg ttatttctta atactgatca aagattaatc tgtagttgct
     1681 cagacattta atcttgaaat agcagcaatt aaaataagcc ttatgcaata accctattta
     1741 ataatcaact tactacttac gtcaagttcc agtatttgta cgctataagc acctgggacc
     1801 aaatccgttt ttatttcaat tcgattttga ggatcggcaa cttgtttttc aactactaat
     1861 ctaccatcag cagagaagat tttaactgta atgcttttgt gttgctcatt taaattgatc
     1921 tcaaacgttc catcagatgg attaggatat atactcaaac ctccgctatt aaattcgttc
     1981 acaaaatcgc tttcataatc cagccgtgca ataaacatat caaatgcccc ccagcccgta
     2041 atttcatgat catcaaaatt agcgtcttcc tgaaagttcc cacaaatgta cagcgactga
     2101 gggtttccgg gtgagatacc ataaccatag tccagataat taccaccggc tcgttttgcc
     2161 cacacaacct cacctgtcca gttatatttt gcaataaaaa tatctgattt gccaacgctt
     2221 tctagaactt tatcaccaaa ctccgcttca ttgctaaaaa atcccgtcgt gaatgtgttt
     2281 ccatttgcat ctgtaaacat atccctaccc tggtccattc cataaccacc agctttacga
     2341 atccatttaa aagcaccttc atgattatac ctcactaaat aagcatcaaa gtcatattgt
     2401 cctcccgtgg actcaactgt ttcttcacta aaagtaagcc ttcccgaaaa agtgccattg
     2461 ccataaacat atccttcatt gtccatactg ataccaaatc cgcgggcata atcgttagcc
     2521 ccaccagttc ctctgcgcac ccataagaag ttgccacctc catccatttt ggcaatatag
     2581 gtactcaaaa atgagttgct cattatatcg tgttctccaa agaaagcctt accattaaaa
     2641 acaccggtaa aataagttgc cccttcatca ttacagatta taccataagc cctgtcttcg
     2701 ccctcaccac cagctttttt aacccaatga aaattgcccg tattagaata gttagcaata
     2761 aaaatatctc tgttaccttc gctggttatt gtagtttctt ctccaaagtg agcggtatac
     2821 ctaaagctcc ccgaaacaat tacatcgtat tcaaaatttg tggttaacct atttccgtaa
     2881 tcatcacctt caccaccagc acttctggcc catataacat gtccttcgct gctatatctt
     2941 gcaacaaaca tgtcataact tccatggctt tcaaggatta tgtcatcaaa atgaattgct
     3001 tctgcaaacc accctgttat tatgggaaaa tcatcccagt cgagggtaat accagctgca
     3061 gaattatttg ctggtccata ggcttttact gcccaaagcg cctcgccatt atcattatac
     3121 tttgccagga aaacatcttg atcgccagtg ctagtaagta ctatatcacc aaaatgtgcg
     3181 cttcctgaaa accatcctgt tacataacta tttccatcat tgtcagtagc tattgcatat
     3241 gcttggtcag agcctcctcc tccggccgat ctagcccaat caaatgtttg actgttactc
     3301 atgcttacaa aaaagaaaat tgcaagggtt agtgtaataa gtttcttcat gtctttagat
     3361 ttttagttag ttattattag ttgtcagatt ctattttgga aaaacgtgct tgtaaaacta
     3421 acaaattgtt ttaatcaata ataatttata aatatagcct ttgaataagg actaattaat
     3481 aaattaaata gttgcaacaa attttatctt tgcactttat tttttgttta tggatgaatt
     3541 aaaaaagaga acaggtcttc tacagaagat gttgaattgg accgaaagaa ttggtaatgc
     3601 attgccacat ccaggtactc ttttcgcatt atttgcatta ggaacactgg tattgtccgc
     3661 tattggatat gctttaggtt gggaagttat tcatcctggc acaaaagaag ttgtaaaaac
     3721 cgttaatcta ttgtcacacg atggtattca ccgaattcta ttggatatgg tggataattt
     3781 tacaggcttt gctcctttag ggattgtaat ggtagcgatg cttgggattg gtatagcaga
     3841 acagagtgga ttgatcagcg caataattcg gttgttggtt ttgaatgctc acagacatct
     3901 gttgacattt ataattgttc ttgcaggtat attatctaat gttgcttctg atgttggata
     3961 tgtattgttg attccacttg ctggggtaat atttgttgcg gttggcagaa atcctattgc
     4021 tggaatggct gcagcttttg cgggcgtttc aggagggttt agtgcaaatc tcgtacttgg
     4081 aaccgttgat cctttgttgg ctggattatc aactgaagca gcccaaatcc tagaccccgg
     4141 ctatgaagta aatccaactg ccaattatta ttttatggtg gcttctacat ttgtaatagc
     4201 atttgccggc acatttgtta ctgaaaaaat tgtagaaccg agactaggaa aatacactgg
     4261 cacgattccg gaaagtgaaa gttcatttgg taaacttacc aaggtggaga aaaaaggttt
     4321 gtgaatgact ctacttatcc ttataattat tataagcatt tcgcttataa gcagaattcc
     4381 tggagataga tttatgagag aa
//
LOCUS       DASCQP010000316         2113 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001164959, whole genome shotgun sequence.
ACCESSION   DASCQP010000316 DASCQP010000000
VERSION     DASCQP010000316.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2113)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2113)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2113
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001164959"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..538
                     /locus_tag="QF480_05445"
     CDS             <1..538
                     /locus_tag="QF480_05445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06039.1"
                     /translation="NMNYWYIDDISLFNPVNLDGEMAAITTYPFVSGPTAVEGVVSNN
                     GLTPITSIEVQWQANGGDIFTSTFSGMNLDLGDSYSFTCADLFDFPIGLYNLQVWLSS
                     VNGTPDDNPDNDMLTKEISVVSHIVNRKPLFEEFTSSTCAPCATFNAPFVPWCVTHED
                     DITLVKYQMNWPGSGDPY"
     gene            complement(486..806)
                     /locus_tag="QF480_05450"
     CDS             complement(486..806)
                     /locus_tag="QF480_05450"
                     /inference="COORDINATES: protein motif:HMM:TIGR00369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016790 - thiolester hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hotdog fold thioesterase"
                     /protein_id="HJN06040.1"
                     /translation="MELSLKELNTLNKGTLMEHLNISYIEVKNNNIIAKMPVNETTFQ
                     PDKILHGGANLALAETVAGLGSSLLVDLKKISVRGAQVSTNHVGTANKGHRNLASSFD
                     ISQV"
     gene            1010..1669
                     /locus_tag="QF480_05455"
     CDS             1010..1669
                     /locus_tag="QF480_05455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06041.1"
                     /translation="MKLLTSLLTFVIFLINISFAQQISRDKVLLEIGTGTWCQYCPGS
                     AMGADDLVANGHDVVVIENHNGDSYANTASNARNAYYNISGYPTALFDGGSAYVGGSS
                     STSLYPQYLSRYNQKINVPTSFSIDIQGTSQGSVDFNVDVTIEMVDPYVGSDIRLHCA
                     ITESHIAELWQGQSHLNFVNRIMLPNHNGIPLDFSSGDVIQQNYSFLIDPEWLPENCE
                     F"
     gene            1688..>2113
                     /locus_tag="QF480_05460"
     CDS             1688..>2113
                     /locus_tag="QF480_05460"
                     /inference="COORDINATES: protein motif:HMM:NF015297.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase/citrate lyase family protein"
                     /protein_id="HJN06042.1"
                     /translation="MDFSAISTMLFTPATRPERFDKAKETQADGLVIDLEDAVELSSK
                     DSARKTVLDYLKSYKPDKNFLTCVRINSIKTPSGLKDISALIDSELRPDVLVLPKVEY
                     AAEIQILDELLSPKHVPYIVLLETARGLFNAKEILLASKN"
BASE COUNT          653 a          384 c          376 g          700 t
ORIGIN      
        1 caacatgaat tattggtaca ttgatgacat ttcattattc aatccagtaa atcttgatgg
       61 tgagatggca gccataacta cttatccttt tgtgagcggt cctacagcag ttgaaggtgt
      121 tgtatccaat aacgggttaa caccaattac ttcaattgaa gtacaatggc aagcaaatgg
      181 aggtgatatt tttacttcaa ctttttcagg aatgaatctg gacttaggtg attcttattc
      241 atttacctgc gctgatctgt ttgacttccc aattggattg tataaccttc aagtttggct
      301 atcatcggta aatggaaccc ctgatgacaa cccagataat gacatgctga caaaggaaat
      361 aagtgtagtg agtcatattg ttaaccggaa accattattt gaagagttta cgagttcaac
      421 ttgtgctcct tgtgccactt ttaatgctcc ttttgttcca tggtgtgtta ctcatgaaga
      481 tgatattaca cttgtgaaat atcaaatgaa ctggccaggt tccggtgacc cttattagca
      541 gtgccaacat gattagtgct tacctgtgct cctctaacag atattttttt tagatcaact
      601 agtagcgatg aacccaaacc agctacggtt tcagctagcg caaggttggc accaccatga
      661 agtattttat ccggttgaaa agtagtttcg ttaacaggca tttttgcaat gatgttgtta
      721 ttttttactt caatataact gatattaagg tgttccatta aggtcccctt attcaaggta
      781 tttaattctt tcagtgagag ttccattttc cagtttaaac ttatatttag tatcaatcaa
      841 aaataaccat aatctctttt gattattatt tcaaggtaat ataaatatca ccactaagca
      901 tttttgttat taaagtaatt gtttgttttt attaaattac gtcagacatt actaaaaaaa
      961 cgtaattttg ttcataatga aaatatttta attacaaact acaaccacaa tgaaactact
     1021 tacttcactt ctaacttttg ttattttctt aattaacatt tcatttgctc aacaaatttc
     1081 ccgtgataaa gtccttttgg aaataggcac tggcacatgg tgccaatatt gtccaggctc
     1141 cgcaatgggt gctgatgacc ttgttgcaaa cggtcacgat gttgtagtaa ttgaaaatca
     1201 taatggcgac agttatgcta acactgcttc aaatgcaaga aatgcctact ataatatttc
     1261 aggttatcca acagcattat ttgatggtgg ctcagcctat gttggaggaa gtagtagcac
     1321 aagtctctac cctcaatact tatcaagata taaccaaaaa attaatgttc ctacttcttt
     1381 ttccatagat attcaaggaa catcacaagg ttctgtagac tttaatgttg acgtaactat
     1441 tgaaatggta gatccttatg taggttctga tattcgcttg cattgtgcta ttactgaatc
     1501 gcatattgct gaattatggc agggtcaatc acacttaaac ttcgttaacc gtatcatgct
     1561 tcccaatcat aatggtattc cattggactt ctcatccggg gatgttattc aacaaaatta
     1621 ttcattccta atagacccag aatggttgcc agagaattgt gaattttaaa tataacaaaa
     1681 gaatattatg gatttctctg caattagcac gatgctattt actccagcaa caagacctga
     1741 gcgttttgac aaagcgaaag aaacgcaagc cgatgggctg gtcattgacc ttgaggatgc
     1801 ggttgagtta agcagtaaag atagtgctag aaaaactgtt ttggattatt taaagagcta
     1861 caagcctgac aaaaacttcc ttacttgcgt acgcatcaat agtatcaaga cacctagtgg
     1921 cttaaaagat atctcagcat tgattgactc agaacttcga ccagacgtgt tggtgcttcc
     1981 aaaggtagag tatgctgctg aaatacaaat tttagacgaa ttgttatctc ctaagcatgt
     2041 cccgtatatc gttctattag aaactgctag agggctattc aatgcaaaag aaattctttt
     2101 agctagcaaa aat
//
LOCUS       DASCQP010000317         6986 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001166246, whole genome shotgun sequence.
ACCESSION   DASCQP010000317 DASCQP010000000
VERSION     DASCQP010000317.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 6986)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6986)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6986
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001166246"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1129)
                     /locus_tag="QF480_05465"
     CDS             complement(<1..1129)
                     /locus_tag="QF480_05465"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: protein motif:HMM:NF001381.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0019205 - nucleobase-containing compound
                     kinase activity [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HJN06043.1"
                     /translation="MLNIALFGPPGAGKGTQSKKLLDKYNLTYISTGDILRTEIADKT
                     QLGLKAKSIIESGGLVPDELVVEIIEKKIKTNQDSRGILFDGFPRTVVQSYILDGLLL
                     KLNTSLDMMISLEVPEDELINRLLLRAKASNRTDDTLDVIKVRLKEYEEKTTPVANYY
                     QDQGKYYKLSGVGELDTIFDNIVDHVEKNKSKEYTNIVLLGKPGVGKGTQGQLLANKH
                     NLVYISTGKLLRKEIINGTEIGSIAAPYMEKGEIVPDEIPIKLIADQIKENPNANGFI
                     FKGFPRTILQAYILDGLLQRVNMRVSNMIELKLNTLEAIKRLSERGKDKKRARPYDLS
                     TELIINRLEQYRKKTDPAIAYYQKQNKYSKINAKGSEEEVFN"
     gene            complement(1145..1681)
                     /gene="hpt"
                     /locus_tag="QF480_05470"
     CDS             complement(1145..1681)
                     /gene="hpt"
                     /locus_tag="QF480_05470"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011965263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006166 - purine ribonucleoside salvage
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine phosphoribosyltransferase"
                     /protein_id="HJN06044.1"
                     /translation="MNNIKLHDKYFEPFIRFEKIDNAISKIADSINRDHEGQTPIFLV
                     ILNGSFMFAGDLLKKIDLSCEVSFLKLASYIGTKSTKNVKQLIGFNEDIKGRTIIIVE
                     DIIDSGITMENVLGQLERMGAANVRIATLLFKPDAFEKVYNIDYIGIKIPNDFIVGYG
                     LDYDNQGRNLRDIYKIIE"
     gene            1827..2333
                     /gene="purE"
                     /locus_tag="QF480_05475"
     CDS             1827..2333
                     /gene="purE"
                     /locus_tag="QF480_05475"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009860133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009320 - phosphoribosylaminoimidazole
                     carboxylase complex [Evidence IEA];
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HJN06045.1"
                     /translation="MKAIVSIIMGSTSDLKVMEKAAAFLDEMEIPFEINALSAHRTPD
                     EVETFAKDADKRGIKVIIAGAGMAAHLPGVIASMTSVPVIGVPINATLDGMDALLAIV
                     QMPPGIPVATVGINGALNAGILALQMIATGNSDVLEKIKNHKKTLKQKIVKANEDLKL
                     VNYKFKVN"
     gene            complement(2440..3669)
                     /locus_tag="QF480_05480"
     CDS             complement(2440..3669)
                     /locus_tag="QF480_05480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009136582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HJN06046.1"
                     /translation="MEYQYHILNNGIKVIHRKISGTVSHCGLMVNTGSRDENENESGI
                     AHLIEHLIFKGTNKRKAYHVLSRIENVGGDLNAFTTKEETCVYASFLSPYYIHSLELF
                     ADVAFNSIFPQKELDKEKEIVIDEINSYNDSPAELIFDDFEDLIFAGHSLGKNILGSI
                     NKIRSINRKDIFRFIKTKYSTDQMVIASVGQIKFSKLIYLTEKYFGAIPASFSKVDRS
                     AFDSYKPKDETTPKNSYLSHCMIGNIAYPRVHPNKLPLLLISNLLGGPALNSRLSIQI
                     REKYGYAYNIESMYQPYSDTGIFNVYIGSDKKYVNKSIDLVHRELKKLRKDKLGTMQL
                     HTAKRQLTGQLAISSESFLNEMLGIAKTNLYKSRVNSITEIIADIEKITAEQILEVAN
                     EIFNPLHLSTLIYKAGD"
     gene            3821..4522
                     /locus_tag="QF480_05485"
     CDS             3821..4522
                     /locus_tag="QF480_05485"
                     /inference="COORDINATES: protein motif:HMM:NF019500.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005267 - potassium channel activity
                     [Evidence IEA];
                     GO_process: GO:0034220 - monoatomic ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium channel family protein"
                     /protein_id="HJN06047.1"
                     /translation="MSIFSKLVNIRILISRKAKFRHNLILLSLNFIFVFIIGLSPDSQ
                     WIPELYSITVSGIFFAAVISISDKHIRYLYFAVILTVLTWVSTYLKLDFIVHTNSIIT
                     IVFFVYIIVVSIIRLAKGKEVGNLEFVRAINIYFLIGIAGSIIFRMLYTTDPNSINVR
                     DENVLATTDLIYFSFDTITTLGYGDITPNSPLTKNVAVFLSFAGQIYLTMVIALLMGK
                     YLRGKSMPEENTNNK"
     gene            complement(4577..5260)
                     /locus_tag="QF480_05490"
     CDS             complement(4577..5260)
                     /locus_tag="QF480_05490"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024760.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0070007 - glutamic-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PrsW family glutamic-type intramembrane
                     protease"
                     /protein_id="HJN06048.1"
                     /translation="MSLVNYFSFAISPLLIIVFVLYLKFKFSIKSYANIRNAILLGVI
                     CVVLLIFANFLIDLKWDGNYKNMRRMAFFVFVIIAFSSEFAKFIPLKFSFYKLKNFGG
                     PLEGLVYSIFISLGFSMAATVLYAFGLVGSLDKFHNVTLFLYTLPFANVVFAIAMGFF
                     VGMAKLRKNTFIDSATGLFVATFFHGLYYFGFVTYDIRLLIFDAIGFTVIGVTFVVKS
                     VSLKLEDRS"
     gene            5351..5620
                     /locus_tag="QF480_05495"
     CDS             5351..5620
                     /locus_tag="QF480_05495"
                     /inference="COORDINATES: protein motif:HMM:NF017690.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HJN06049.1"
                     /translation="MSKIVIKKLNNSEKKELGIDSWPIWEKEISRFNWTYSGDEQCYI
                     IDGEFSVETDDGNYDIKPGDFVVFKKGLSCVWDIKKSVKKHYNFS"
     gene            5617..6537
                     /gene="rsgA"
                     /locus_tag="QF480_05500"
     CDS             5617..6537
                     /gene="rsgA"
                     /locus_tag="QF480_05500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007667306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome small subunit-dependent GTPase A"
                     /protein_id="HJN06050.1"
                     /translation="MTRTFKGRVIKSTGSWYSVMDDAGKTINCRLKGLYRTKGIRATN
                     PIAVGDIVDYSISDTDNSGLIINIHARKNYLIRKATKLSKATQIIAANIDQVVVIVSL
                     TKPRTSTGFIDRILTTSEAYHIPAIIIFNKFDLYDKKTIVTLEFIKKAYEKEGYKCLI
                     TSVPERIRLNEFKAILQGKISLLSGHSGVGKSALINCIDSSLSLKTGEISDYHKKGIH
                     TTTFANMFHLQFGGYVIDTPGIKEFGLVEFDKVELGQRFPEIRNLMQQCRFNNCLHLN
                     EPGCAVIKAVSKGDIVEFRYTNYLNMLSSI"
     gene            6594..>6986
                     /locus_tag="QF480_05505"
     CDS             6594..>6986
                     /locus_tag="QF480_05505"
                     /inference="COORDINATES: protein motif:HMM:NF012780.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HJN06051.1"
                     /translation="MIASRLIQEEIMPLNITDTANEALNRMNEYKVSHFPVADNGHFV
                     GVISEKDIYNHENLTRELQKEFIHFDNFYVNEDQYILDVLKLISDQKLSLVPVIDDKG
                     NYIGCITQSDLISFFAESMSVDYPGGVIV"
BASE COUNT         2312 a         1108 c         1132 g         2434 t
ORIGIN      
        1 tgttaaaaac ttcttcctca cttcctttag catttatttt actgtatttg ttctgctttt
       61 gataataggc tattgcagga tcggtttttt tccgatactg ttctaaccgg tttataatta
      121 gctcagtact taaatcgtaa ggtctggctc ttttcttgtc ttttcctctt tcgctaagac
      181 gttttattgc ttcaagagta tttagtttaa gctctatcat attagatact ctcatattta
      241 ctcgttgcaa tagaccgtca agtatgtaag cttgtaatat tgtccttggg aatcctttga
      301 aaataaaacc attagcatta gggttttctt ttatttgatc tgcaattagc ttaataggga
      361 tttcatcggg tacaatttca cctttttcca tatatggtgc agcaatactt ccaatttctg
      421 taccgttaat aatttccttt ctgagcagtt tccctgttga tatatatacc aagttatgtt
      481 tgtttgctaa caattgaccc tgtgttcctt tcccaacacc cggtttgccc agtaatacga
      541 tgtttgtata ttctttgctt ttattttttt caacatggtc cacaatattg tcaaaaatag
      601 tatctaactc accaacacca ctcagtttat aatatttacc ctgatcctga taataattag
      661 caacaggtgt agttttttcc tcatactcct ttaatcttac ttttatcaca tccaacgtat
      721 catcagtgcg gtttgaggct ttggctctca gcagtagtct attaataagc tcatcctcag
      781 gaacttcgag gcttatcatc atatcgagtg atgtattaag tttaagcaac aatccatcaa
      841 ggatataaga ttgcacaact gttcttggaa atccgtcaaa aaggatacct cgtgaatctt
      901 gatttgtttt tattttcttt tcaattattt ctacaactaa ttcatcaggt accaatccgc
      961 cagactcaat tatacttttt gctttaaggc caagttgtgt tttatcagca atttctgttc
     1021 ttaatatatc acctgttgag atgtacgtaa ggttatattt atctaataat ttcttcgatt
     1081 gtgttccttt gccggcacca ggaggtccaa ataaagcaat gtttagcata ttagtaatat
     1141 ttatttactc aattatttta taaatgtctc tcaggttcct tccctgatta tcgtagtcca
     1201 atccgtaacc tacaataaaa tcatttggaa tttttatacc aatgtaatca atgttatata
     1261 ctttttcaaa cgcatcaggt ttaaacaaaa gtgttgcaat gcgaacatta gcagctccca
     1321 ttcgttcaag ttgtcccaga acgttttcca ttgttatccc tgaatctata atatcttcta
     1381 ctataatgat ggttcgtcct ttaatatcct cattaaaacc aattagttgt tttacatttt
     1441 tcgtgctttt ggtgccaata taagaagcaa gcttaagaaa agatacttca caagataaat
     1501 caattttttt tagcaaatcg ccagcaaaca taaaagaacc gtttagaata acaagaaata
     1561 ttggagtttg gccttcatga tctctattaa tgctatcggc tattttactt attgcattgt
     1621 caattttttc aaaccgaata aaaggttcaa agtatttatc atgtaatttg atgttattca
     1681 tttaacgttt gttttgcgta acacgtaaga ttatgagcct cttattatta aagaatcaag
     1741 ttcgcaaaga taaaatttaa cgtataatta ccaactgcat tttaattatt tttgcagact
     1801 aatatttatt aataaagccg gtttatatga aagcaatcgt cagtataatt atgggtagta
     1861 catccgattt aaaggtaatg gagaaagcag ctgcattttt agatgaaatg gaaattccgt
     1921 ttgagataaa tgcactttca gcacatcgca cacctgatga agttgagact tttgcaaagg
     1981 atgcagacaa aaggggtata aaagttatca ttgccggagc aggtatggct gcacatcttc
     2041 ctggcgttat tgcttcaatg acatctgttc ctgtaattgg tgttccaatt aatgccactc
     2101 ttgatgggat ggacgcttta ctggcaattg tgcaaatgcc tccgggtatt ccggttgcta
     2161 cagttggtat taatggggca ctaaatgctg gtatattagc tttacaaatg attgcaactg
     2221 gcaattctga cgtgctggag aaaataaaaa accataagaa aacgcttaaa caaaaaatag
     2281 taaaggcaaa cgaagatttg aaattagtaa actataaatt taaggtaaat tagtttttgt
     2341 taaatgcaat ggttgtttag ttatctaaaa aagatactcc tccacaatca taatttcaag
     2401 attcttttgg ataaaaagat attatagtta atatcaagat taatccccag ccttataaat
     2461 taatgtactc agatgtaatg gattgaatat ttcattggca acttcaagta tttgttcagc
     2521 agtaattttt tcaatatcag caatgatttc tgtgatgcta ttaactctgg atttgtaaag
     2581 attggttttg gcaataccta acatctcatt aaggaatgat tcgcttgaaa tagcaagttg
     2641 tccggttaat tgacgctttg cagtatgtag ctgcatagtc ccaagtttat cttttctaag
     2701 cttttttaac tctctgtgta caagatcaat acttttattt acatattttt tatccgaacc
     2761 aatgtaaacg ttaaatattc cggtgtcaga atagggctga tacattgatt caatattata
     2821 tgcatatcca tatttttcac gaatttgtat acttagtcgt gaatttaatg ctggaccgcc
     2881 aagaagattg cttatcaata acagtggtag tttattagga tgaacacgag ggtatgctat
     2941 attaccaatc atacaatgtg ataaatatga gttcttaggt gtagtttcat cttttggttt
     3001 ataagaatca aaagcagaac gatctacttt gctgaaggag gctgggatag caccaaaata
     3061 tttttctgtc aaataaataa gtttagagaa ttttatttgg cctactgagg cgataaccat
     3121 ttgatcagta ctgtatttcg tttttataaa tcgaaatata tctttcctgt tgattgatcg
     3181 tattttattt atgcttccta atatattttt tcctaaagag tgccctgcaa aaattaaatc
     3241 ttcaaaatca tcaaaaatca actcagctgg actatcgtta taagagttta tttcgtctat
     3301 tactatttct ttttctttat ctaactcctt ctgcgggaaa atagaattaa acgcaacatc
     3361 tgcaaaaagt tctaagctat gtatatagta aggcgataaa aaagaagcat aaacgcaggt
     3421 ttcttctttt gttgtgaaag catttagatc gcccccaaca ttctcaattc gactgagtac
     3481 atggtaggcc ttacgtttgt tagtgccttt gaatattaaa tgttcaataa gatgggcaat
     3541 accgctctca ttttcgtttt catctcttga tcctgtatta accattaacc cacaatgtga
     3601 tacggtgcct gagattttgc gatgaataac tttgatgcca ttattaagta tgtgatattg
     3661 atattccaac ttaagattat ttttgtaatg caaaaatagc aaagctatta acaagagttg
     3721 ggctttagat tatttactca ttgctattca ataagcatgg ttatataaga ttatatttct
     3781 tattttaata ttcattctta caaattttat acttttgaac atgagtattt tttcaaagct
     3841 ggtaaatatt aggattttaa tttctcgaaa agctaaattt agacataatc tcattttact
     3901 ttcgcttaat tttatttttg tttttattat aggactctct ccagatagtc agtggattcc
     3961 tgaattatac agtattactg tttcgggtat ttttttcgca gcagtaatca gtatatccga
     4021 caaacatatc cgctacctat attttgcagt tattttaaca gtgctaacat gggtatcaac
     4081 ttaccttaaa cttgatttta ttgtccatac aaactccatt ataacaatag tattctttgt
     4141 ttatataatt gttgtctcca ttataagatt ggctaaaggc aaagaagttg gtaatcttga
     4201 atttgtgcgg gcaataaaca tatatttttt gatcggtatt gcaggtagta ttattttcag
     4261 gatgctttac acaaccgatc ccaatagtat taatgttaga gatgaaaatg tacttgctac
     4321 tacagatctt atatacttta gttttgatac aattactacg cttggatacg gtgatataac
     4381 tccaaattca ccacttacaa aaaacgttgc tgtattcctg agtttcgcag gtcaaatata
     4441 tcttacaatg gttattgctt tacttatggg taaatatctc agaggaaaaa gcatgcccga
     4501 agaaaacaca aacaataaat gatattcaag gattattaag ccttaagatt atttaaaacc
     4561 aagttgattt ttgtgatcaa cttctgtctt caagtttaag ggaaactgac tttacaacaa
     4621 aagttacacc tataacggta aatccgatag cgtcaaatat taacaacctg atatcatatg
     4681 tgacaaatcc aaaataataa aggccatgaa aaaaagttgc tacgaacaaa cctgtagcac
     4741 tatcaataaa agtgtttttg cgcaattttg ccataccaac aaaaaagccc atagctatag
     4801 caaaaaccac atttgcaaat ggtagtgtat ataaaaataa ggtgacgttg tgaaacttgt
     4861 ctaacgatcc aaccaatcca aaggcatata atacagttgc agccatcgaa aagccaaggc
     4921 taataaatat tgaataaact aatccttcta atggaccacc aaagttttta agcttataaa
     4981 aagaaaactt caatggaata aattttgcaa attctgagct aaaggcaata ataacaaaaa
     5041 cgaaaaaagc cattcgacgc atgtttttgt aattaccgtc ccatttaagg tcaataagga
     5101 aatttgcaaa tatcagcagt actacacaaa taacccctaa taaaatcgca ttgcgaatat
     5161 ttgcatagct ttttatcgaa aatttgaatt ttaggtagag gacaaatact attatcaata
     5221 acggtgaaat cgcaaatgaa aagtaattta caagactcat acacatttgg ggtttgtgaa
     5281 caacaggtca aatataataa atgtttgtaa tttagtcatc aatttggtat taattgttaa
     5341 aattcactct atgtcgaaaa tagttattaa aaaactaaat aactctgaaa aaaaggagct
     5401 gggaatagat tcttggccaa tatgggaaaa agaaatatca cgatttaatt ggacatattc
     5461 aggagatgaa caatgctata ttattgatgg tgaattttct gtagaaactg atgatgggaa
     5521 ttacgatatt aaacccggtg attttgtagt tttcaaaaaa ggattatcat gtgtttggga
     5581 tattaaaaaa tctgttaaaa agcattataa cttttcatga caagaacttt taaaggtaga
     5641 gtaataaaat ctactggtag ttggtattcg gttatggacg atgccgggaa aacaattaat
     5701 tgtcgtttga aaggccttta cagaacgaag ggaattagag cgacaaaccc aattgcagtt
     5761 ggtgatattg ttgattatag tatctcggat actgataatt caggcctcat tataaacatt
     5821 catgctcgga aaaactatct aattcgtaaa gccacaaaac tttcgaaagc aactcaaatt
     5881 atcgctgcaa atattgatca ggtagttgtt attgtttctt taacaaaacc acgcacatca
     5941 acaggtttta ttgacaggat cttaactaca tctgaagcct atcatatacc agctataatt
     6001 atttttaata aatttgatct ttatgataaa aagacaattg ttactcttga atttattaaa
     6061 aaagcctatg aaaaagaagg ttacaaatgc ctgattacat cagtgcctga aagaatcaga
     6121 ttaaatgagt ttaaggcaat attacaggga aagataagtt tgttatcagg gcattcgggt
     6181 gtggggaaat ctgcactcat aaattgtatt gactcatcat tatcattaaa aacaggtgaa
     6241 atatccgatt atcataaaaa gggaattcat accacaacat ttgctaatat gtttcatctt
     6301 caatttggag gttatgtgat agatactccg ggaataaaag aatttggact tgttgagttt
     6361 gacaaggttg aacttggcca aagatttccg gaaattagaa atttaatgca acaatgtaga
     6421 ttcaataatt gcttacattt aaatgaacct ggatgtgcag taattaaagc tgtttcaaaa
     6481 ggtgacattg ttgagttcag atatactaac tatttaaaca tgctaagttc aatttaaaat
     6541 aattatattt tttaaataac taaaagtagt tcttaatacc taaatactaa caaatgattg
     6601 catctcgatt aattcaggaa gaaataatgc cgcttaatat aactgataca gctaatgaag
     6661 ctttgaaccg catgaatgaa tataaagtgt cgcattttcc agtagctgac aatggtcatt
     6721 ttgttggagt tatctcggaa aaagatattt ataatcatga aaatctaaca agagaattgc
     6781 aaaaggagtt tatacatttt gataattttt atgtaaacga agatcaatat atattggatg
     6841 tgctaaagct gattagtgac caaaagctgt ctttagttcc ggttattgat gataaaggaa
     6901 actatattgg ttgcattact caaagtgatc ttattagctt tttcgctgaa agcatgtcgg
     6961 tagattatcc tggtggtgta attgtt
//
LOCUS       DASCQP010000318         3423 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001168974, whole genome shotgun sequence.
ACCESSION   DASCQP010000318 DASCQP010000000
VERSION     DASCQP010000318.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3423)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3423)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3423
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001168974"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            374..961
                     /gene="sigZ"
                     /locus_tag="QF480_05510"
     CDS             374..961
                     /gene="sigZ"
                     /locus_tag="QF480_05510"
                     /inference="COORDINATES: protein motif:HMM:TIGR02959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor SigZ"
                     /protein_id="HJN06052.1"
                     /translation="MQETINIESLWENIHGKLHGFVSKHIKNKDDVNDIVQDTFIKVK
                     TNINALKNPAKVESWIFQIARNIINDHFRELKKSLKDDNIPDDVAIDPVAFADEDIRT
                     KIQTQGFSEYAGFVISELPEKYRIAVHLSDIEGLSMKEVAEELNISVSGAKSRVQRGR
                     KMIKEIILKCCAVNADKYGNIVDYEPHDCSTNDSC"
     gene            964..1869
                     /locus_tag="QF480_05515"
     CDS             964..1869
                     /locus_tag="QF480_05515"
                     /inference="COORDINATES: protein motif:HMM:TIGR01297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HJN06053.1"
                     /translation="MEQNQHNSNSNQISGTKIGITVILNIFITVAQIIGGIISGSIAL
                     LTDALHNFSDVISLLLSYITNRLAKKKSTIKQTYGFKRAEILSTFVNSVTLIAIAIYL
                     IVEAVQRFLNPEPVKADLVIYFAFGSIVINFISVLLLYKDSKNSMNIKSAYLHLLTDV
                     MTSIAVMIGGILMKYFDIYRIDSILSVVIAIYLIFASYKLLLASIKILMQFTPHDVDI
                     IGVTNQICDISCVKNVHHVHFWQLNDKDIFFEAHIDLEKDINITEFQDILKEIETILY
                     NNNITHYNIQPEYGMDDSKNLIIQH"
     gene            2026..>3423
                     /locus_tag="QF480_05520"
     CDS             2026..>3423
                     /locus_tag="QF480_05520"
                     /inference="COORDINATES: protein motif:HMM:NF025092.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HJN06054.1"
                     /translation="MIRVILLSILLTQISFAKGISQTIQEDTIFDTIQLKEELKGLVL
                     DIDRQIGLPYANIYVLHKNIGVISNEKGYFSINIKGLNSDDTIRFQYIGYKTKNITIG
                     ELDTSKVVYLKEEIFNLSETIIFGNKLNAESIVKKVLENKESNYKKTTAYKQAFIREK
                     DIADIEEMNLNLKKSSFSEIDPELLELVEEKTPKHSTSYTDFLGNLYSSSNENDSITF
                     KIDPIRTVSLKEKDIAELEQIETVFKNIFNNTEEEEYWKIKTGILSQKIDVNEEKDEP
                     KKDSLNENERKVSSFRRRILSQLNYSTMNYKKEWEFLHSTGKYKYNIIGGTRVNGEDV
                     YIIDFTPRSGGEFIGRMYISMNTFALIRADYEYAPDKTGTDIHLFGVGYTEDQFSGSI
                     YFEKKDSTYSLKYFSRKAGSYASFDRSLSLLKKRKRFLFDKKLDEFKVGVILSVKMEE
                     SVEFVVLDDKQISHNE"
BASE COUNT         1274 a          470 c          573 g         1106 t
ORIGIN      
        1 ttaataatta caaataattc tccttcccgt tgagaaatca acaatggtac acgtggtatt
       61 tgatctaaat aattacaaat tataacatgc aatttgtaat tagaagaagt caattaacaa
      121 cctttcgatg cccggataat atctgggcat tcttatttaa aacgtacgtc gtctatgcct
      181 attcccactg ttagttttac aatgttgcct cgctattggt ttagctcgcc gttaggattc
      241 ctgtagaatc agaagtacaa ataaccacat ataaagctca gttgtttcat tgtggtgttg
      301 caagtattta ttgctcatct gcattgaaaa gttatatctt tgaagattct tcagattagc
      361 actattttat aatatgcaag aaactatcaa catagaaagt ctttgggaaa atattcatgg
      421 aaaattacat ggatttgttt caaaacatat taaaaacaaa gacgatgtaa acgatattgt
      481 acaggatacc tttataaaag taaaaactaa tattaatgca ttaaaaaatc cagcaaaagt
      541 tgagagctgg atatttcaaa ttgcccgtaa tattataaac gatcattttc gagaattgaa
      601 gaaatcttta aaagatgata atattcctga tgatgttgca attgatccag ttgcttttgc
      661 cgatgaggat atcagaacaa agattcaaac acagggattt tccgaatatg ctggctttgt
      721 aatatctgag cttcctgaaa aatacagaat agctgtgcat ttatctgata ttgagggttt
      781 atcaatgaaa gaagttgccg aagaattaaa cataagtgtc tccggtgcaa aatctcgagt
      841 acaaaggggt agaaagatga ttaaagaaat catacttaaa tgctgtgccg tgaatgcaga
      901 taaatatggt aatattgtgg attatgaacc gcacgattgc agtactaatg atagttgcta
      961 ataatggaac aaaatcagca caatagtaac tcaaaccaaa tctcaggtac taagattggg
     1021 attactgtta tccttaatat ttttattaca gttgcacaaa ttataggtgg gattatttcg
     1081 ggtagtattg ccctgttaac tgatgcgctt cataatttta gtgatgtcat ttcactctta
     1141 ttaagttata ttacaaaccg cttagcgaag aaaaaatcaa caataaaaca aacctacgga
     1201 tttaaacgag ccgaaattct atcaactttc gtaaactccg taactctaat agcaatagca
     1261 atatatttaa ttgtagaagc agttcaaagg ttcttaaatc ctgaacctgt gaaagcagat
     1321 ctggtaatat actttgcatt tgggagcatt gttataaatt ttataagcgt actgctatta
     1381 tataaggatt caaaaaatag catgaatatt aaatcggctt atctgcattt gttaaccgat
     1441 gtaatgacat caattgcggt tatgataggt ggaatattga tgaaatattt tgatatttac
     1501 cgtattgaca gtattctttc agttgtaatt gcgatttatc tgatttttgc aagttataaa
     1561 ctgctattgg catctattaa aattttaatg caatttactc cgcatgatgt tgatataata
     1621 ggtgttacaa atcagatatg tgatattagc tgcgtgaaaa atgtgcatca tgtacatttc
     1681 tggcagctta acgataaaga catttttttt gaagcacata tagaccttga aaaggatatt
     1741 aacattactg agtttcagga tatcctaaaa gaaatagaga caatacttta caataataat
     1801 attactcatt acaatattca gccagaatat ggaatggatg attctaagaa tttgatcatc
     1861 cagcattgat tgataaagag tgacccagac taatatccca tgttggaaaa cttggtttaa
     1921 tcgctaaata atgttaaagt tgtaacatta ttatctactc attcgttaat aataaaaagt
     1981 aattcttaat taaactttct taagcaaagt aggaccatta aaattatgat acgagtaatt
     2041 ctattatcaa tacttcttac acaaatatca tttgccaagg gtatttcaca aactatacaa
     2101 gaggatacaa tttttgatac tattcaatta aaggaagaac taaaaggttt agttcttgat
     2161 attgatcgtc aaattggcct tccatacgcc aatatttatg tgctgcataa aaatattggt
     2221 gtaatcagca acgagaaagg ttatttctca ataaatatta agggtttgaa tagtgatgac
     2281 actatccgtt ttcaatacat tggttataaa actaaaaaca taactattgg tgaattagac
     2341 acctcaaagg ttgtttattt gaaagaagaa atattcaatt tgagtgaaac aattattttt
     2401 ggtaataaac ttaatgctga atcaatagta aaaaaagttt tggagaataa agagtcgaat
     2461 tacaaaaaaa caacagcata caagcaagca tttattcgcg aaaaagatat tgctgatatt
     2521 gaagaaatga accttaatct taaaaaaagt tcgttctccg aaatagatcc tgaattgtta
     2581 gaattggttg aagaaaaaac accaaaacac tctacttcgt acactgattt tttaggaaat
     2641 ctttactcct cttcaaatga aaatgactct attacgttta aaattgatcc aattagaaca
     2701 gtctctctta aagagaaaga tattgctgaa ttagaacaaa tagaaacagt ttttaaaaat
     2761 attttcaaca acactgaaga agaagaatat tggaaaatta aaactggaat tcttagtcaa
     2821 aaaattgatg ttaatgaaga aaaggatgaa ccaaaaaaag attcgttgaa cgaaaatgaa
     2881 agaaaagtat caagttttcg aagaagaata ttatcccagc tcaattatag tacaatgaat
     2941 tataaaaagg aatgggagtt tttacatagt accggcaaat acaagtataa cattattgga
     3001 ggaactagag ttaatggtga agatgtttat ataattgatt ttacaccaag gagtggtggt
     3061 gaatttattg gcagaatgta tatatctatg aacacatttg cacttatcag agctgattat
     3121 gaatatgctc ctgataaaac aggtacagac attcatctgt ttggagttgg ctatacagaa
     3181 gatcaattta gcggatcaat ttattttgag aaaaaagata gtacatatag tttgaagtat
     3241 ttttcaagaa aagcaggttc ttatgcttct tttgacagga gtttatcgtt gttaaaaaaa
     3301 agaaaaagat tcttatttga taaaaaactt gatgaattca aagttggtgt cattctctct
     3361 gttaaaatgg aagaatcagt tgaatttgta gttcttgatg acaagcaaat ttcgcacaac
     3421 gaa
//
LOCUS       DASCQP010000319         1590 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001170907, whole genome shotgun sequence.
ACCESSION   DASCQP010000319 DASCQP010000000
VERSION     DASCQP010000319.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1590)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1590)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1590
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001170907"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            24..>1590
                     /locus_tag="QF480_05525"
     CDS             24..>1590
                     /locus_tag="QF480_05525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06055.1"
                     /translation="MQMKLMELLTPHNLISPVPARAIMHAHPFEYCSRVMEDHEFYFK
                     KTSQIDKEEPVMEIFLSPIREHTLYDADVQFIASGNTLFRIDSSSRKTKVCSTKSREG
                     LVDVLWIGMRLNKSVTSLKGMSFYFDIENVNDLEEKLFFNALKTGIWEINNIKLNVHS
                     GYCDTEINNNKKQIKLPTSEFNTSFALSHHVLDFYKKYFISFSDDQTDSLITQDSYIV
                     YPDSFTQIFDQVDLEVIDSKLVWIKVSFPQYIAQQLLDHVVCTVNCFPVINRKTEKIV
                     ITGYERIKELWAEPHEVFFDLKNIICDEELEIILGDSEPKNMEGKALLTLRKDNIGRM
                     DRNNAVDMITRTINAYKSEYAAFSKIKSIEPGDVEKLYDAIRPFEHGIDEIRNYTTGT
                     NPYIMLKTDPAKEDVEVELSYYLTNGSLGNQIPAYEPINFDGADLIKNKLFLMTQSMG
                     GTDVKQDEDLMREFRYSVLSHGRLVTIEDIKALCESQYGKYADAIEVKKDVETNTQNQ
                     SGLTRIISISINLK"
BASE COUNT          559 a          268 c          315 g          448 t
ORIGIN      
        1 ctatcaacga agttcgtcaa aacatgcaaa tgaaactgat ggaactgctt acaccacata
       61 acttaataag ccctgttcct gcacgtgcaa ttatgcatgc tcatcctttt gagtattgta
      121 gcagagtgat ggaggatcat gagttttatt ttaagaagac aagccaaata gataaggaag
      181 agccagtaat ggaaatcttt cttagcccta taagggaaca cacgttgtat gatgcagatg
      241 tacaattcat tgcttctgga aatactcttt tcaggattga ttcgtcttca aggaaaacta
      301 aagtgtgtag tacgaagtca cgtgaagggt tggttgatgt tttatggatt ggaatgaggc
      361 tgaataaatc ggttacatca ttgaagggca tgtcatttta ctttgatatc gaaaatgtga
      421 acgatcttga agaaaagctt ttctttaatg cattaaaaac aggcatatgg gaaataaata
      481 acataaaatt aaatgtacac tctggatatt gtgacaccga gattaataat aacaaaaaac
      541 aaattaaact tccaacatct gagtttaata cgtcgtttgc attatcccat catgtacttg
      601 atttctacaa aaagtatttt atttcctttt ccgatgatca aactgactca ttaataacac
      661 aggactcata tatagtttat cctgattcct ttacacagat atttgatcag gtagaccttg
      721 aagtaattga tagtaagtta gtatggataa aagtgagttt tccgcaatat atcgcacagc
      781 aactgttgga tcatgtagta tgcactgtaa actgtttccc tgttataaac agaaaaaccg
      841 aaaagattgt aattacaggt tacgaaagga tcaaggaact ttgggctgaa ccccatgaag
      901 ttttctttga tctgaagaac ataatatgtg acgaagagtt agagataata ctcggggata
      961 gtgaacctaa gaatatggaa ggcaaagcac tccttacgct tcgtaaagat aacatcgggc
     1021 gaatggacag aaacaatgct gtagatatga taaccaggac aattaatgca tacaagagcg
     1081 aatatgcagc cttctcaaaa attaaaagta ttgagcccgg tgatgtcgaa aaactttacg
     1141 atgcgatacg cccttttgaa catggtattg atgaaatccg taactacact accggaacca
     1201 atccctatat aatgctcaaa accgatcctg caaaagagga tgtggaagtg gaactaagct
     1261 attatcttac aaatggcagc ctgggcaacc agattccagc atacgaaccg attaatttcg
     1321 acggtgctga tctaatcaaa aataaacttt ttttaatgac ccaatcaatg ggtggaacag
     1381 atgtgaaaca ggatgaggat ttaatgaggg aattccgata ttcagtacta agccacggca
     1441 gactggttac tattgaggat attaaagcct tgtgtgaaag tcaatatggt aagtatgctg
     1501 atgctataga agtaaaaaaa gacgtggaga ccaacactca aaatcaatca ggtcttacac
     1561 ggattatcag tatttccatc aacttgaaaa
//
LOCUS       DASCQP010000320         2806 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001174861, whole genome shotgun sequence.
ACCESSION   DASCQP010000320 DASCQP010000000
VERSION     DASCQP010000320.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2806)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2806)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2806
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001174861"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..211
                     /locus_tag="QF480_05530"
     CDS             <1..211
                     /locus_tag="QF480_05530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006744832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
                     /protein_id="HJN06056.1"
                     /translation="DRILITAATPEIPDELLKQLKPGGKLVAPLGTGSIQTMIRLTKK
                     SDNKIDKEHFGTFRFVPMLKNKADD"
     gene            complement(223..>2806)
                     /locus_tag="QF480_05535"
     CDS             complement(223..>2806)
                     /locus_tag="QF480_05535"
                     /inference="COORDINATES: protein motif:HMM:NF012906.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycoside hydrolase family 2 protein"
                     /protein_id="HJN06057.1"
                     /translation="FLKLILSILLCAMLFSCTNEKTNFYSVNIIDNWTFKAVCDSIWL
                     KATVPGYVHTDLMDNSIINDPYYRLNEKHVQWIDKKDWEYKTTFNIDKKILNKDMVEL
                     EFNGLDTYANIYLNDQLILKTDNMFISWVIDCKDYLKLGKNILRIVFESPINIGLQKR
                     ENLGYQLPGAENDQSELGGLGNKKVNVFTRKPAYHFGWDWGPRLVSSGIWQDVKLNAW
                     DKAKIVDVSIVQEIVSENEAILQSQIEIESFNKNEVTLIYLIDSVIAVEKKIDFVKGS
                     NSISVPLIIENPELWWTNGLGNQKLYNIEVLIKDDSGILSSREKNIGLRTLEVIQQPD
                     SIGKSFYFRLNGYPVFMKGANYIPQDVFLTRVTDDDYERIIKAAADANFNMLRVWGGG
                     IYEREIFYDLCDEYGILVWQDFMFACAMYPGNKEFLDNVEKEAVQIVKRLRNHPCIAL
                     WCGDNEILSAWNRWGWKENVVENQGLDIVDTIWEAYKDIFHDILPRVVNQLDPQKLYW
                     SSSPSSGFGELENGKSGDQHYWGVWWAKEPFSKYEEVIPRFMSEFGFQSFPALNSVKK
                     YSIEEDWDINSDVMKSHQRSGIGNATIEEYLLRDYHKPKDFEMFLYVGQLLQARGITI
                     GIEAHRRNMPHCMGSLYWQLNDCWPVSSWSGIDYYGDWKALHYAVKKAFKNLKISFKT
                     NNDNLEVFIISDSLQNTKASLELTIIDFYGNILNKLEKDIVVESNCSQVYLCKDIPDL
                     VLGNDLNNVLISAVLSDSKRNVIDESLYYFVPPKDLKLPDPKVTIEVENRENNMVAFK
                     LATEVLAKNVYLQCNVEGHFSENYFDLLPNSEMKLFFISEEEVDINDLRKGLTVYTLV
                     DSFE"
BASE COUNT          903 a          563 c          418 g          922 t
ORIGIN      
        1 cgacaggatc ttaattacag ctgctactcc cgaaattcct gatgaattat taaagcaact
       61 aaaaccaggg ggtaaacttg tcgcaccatt gggtacagga agtattcaaa caatgatcag
      121 gttaaccaaa aaatctgaca acaaaatcga caaagaacat tttggaacct ttagatttgt
      181 cccaatgtta aaaaacaaag ctgacgattg attgagaact gattactcaa aactgtcaac
      241 aagtgtataa actgttaatc cttttcttaa gtcgttgata tcaacttctt cttcagaaat
      301 gaagaatagt ttcatctcac tgttaggtag caggtcaaaa taattctctg aaaaatggcc
      361 ttcaacattg cattgcaaat aaacattttt agctaacact tcagtagcta atttgaatgc
      421 gaccatgtta ttttccctat tctcaacttc aattgttact tttggatccg gcagtttaag
      481 gtcctttggt ggcacaaaat agtataatga ttcatcaatg acatttcttt ttgaatcact
      541 taatactgcg gatattagaa cgttattcaa atcgttccct aatactaaat ctggtatatc
      601 tttacacaga taaacttggc tacaattaga ctcaacaact atatcttttt ccaatttgtt
      661 taagatatta ccatagaaat caataatagt cagttctagt gaagcttttg tattctgtaa
      721 actatcagaa ataataaaaa cttcgagatt atcattattc gttttaaagg atatttttaa
      781 atttttaaag gcctttttta ctgcataatg caaagctttc caatcgccat aatagtctat
      841 cccggaccag gatgaaaccg gccaacaatc gtttaattgc cagtacaatg accccatgca
      901 gtgtggcatg tttcttctgt gagcttcaat tccgatagtg ataccacgag cttggaggag
      961 ttgtcccaca tacaaaaaca tctcaaaatc ttttggttta tgataatcgc gaaggaggta
     1021 ttcttcaatg gtggcattac cgatgccgga gcgctggtgc gacttcatca cgtctgaatt
     1081 aatatcccag tcttcttcaa tagaatattt tttaacagaa tttaatgcag gaaatgactg
     1141 aaaaccaaat tccgacatga aacgaggtat tacttcctca tattttgaga atggttcctt
     1201 tgcccaccaa actccccaat aatgctgatc tcccgacttt ccattttcaa gttcaccaaa
     1261 tccactactg ggcgaagatg accagtataa tttttgaggg tcaagttgat ttactacccg
     1321 aggtaatata tcatgaaata tatctttgta ggcttcccat atagtgtcga caatatctag
     1381 tccctgattt tccacaacat tttctttcca tccccaacga ttccaagcag atagtatctc
     1441 attgtcacca caccataaag caatgcaagg atgattgcgg agacgtttta caatttgaac
     1501 tgcttctttt tcgacattat ctaagaattc tttattacca ggatacattg cacaggcaaa
     1561 cataaaatct tgccaaacca gaattccgta ctcatcacat agatcataaa aaatctccct
     1621 ttcataaatt ccaccgcccc atactctgag catattaaaa tttgcgtcag cagcagcttt
     1681 aataattctt tcgtaatcat catcagtgac cctagttaaa aatacatcct gtggaatgta
     1741 attagcacct ttcataaaaa caggatatcc attcagccga aaataaaaac tcttaccaat
     1801 actgtcgggt tgctggatga cttcgagagt ccttaatcca atattctttt ctcgtgaaga
     1861 aagaatccct gaatcatctt taataagtac ctcaatatta tacagtttct gatttcctaa
     1921 tccattagtc caccaaagtt ctggattttc gataattaaa gggacagata tactattact
     1981 tcctttcaca aagtctatct ttttttcaac agctataact gaatcaatta agtagatgag
     2041 agttacttca tttttgttaa atgattcgat ttcaatttgc gattgtagaa ttgcctcatt
     2101 ttctgacact atttcctgta caatactcac atcaacaatt ttagctttat cccaggcatt
     2161 cagttttaca tcttgccaaa ttccgctact tactaaccta ggaccccaat cccaaccgaa
     2221 atgatatgca ggctttcgtg tgaacacatt taccttttta ttgccgagtc cgccaagttc
     2281 agattgatca ttctcagctc ccggaagttg ataaccaaga ttttcacgtt tctgaaggcc
     2341 aatatttatt ggggattcaa aaacaattct taagatattt ttacccaact tcaaataatc
     2401 tttacaatca ataacccagc taataaacat attatctgtt ttgagaataa gctgatcgtt
     2461 taagtaaata tttgcataag tatcgagacc attaaattcc aattctacca tgtctttatt
     2521 gaggatcttt ttatcaatat taaaagtggt tttatattcc cagtcttttt tgtcgatcca
     2581 ttgaacgtgt ttttcattaa gcctatagta tgggtcatta ataatactat tatccattaa
     2641 gtcagtgtgc acatatccgg gaacggtggc ctttaaccaa atactatcac aaactgcttt
     2701 aaaagtccag ttatcaataa tgttgacact ataaaagtta gttttttcat ttgtgcagga
     2761 aaatagcatt gcacatagga gaatagataa gatgagtttc agaaaa
//
LOCUS       DASCQP010000321         3316 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001176155, whole genome shotgun sequence.
ACCESSION   DASCQP010000321 DASCQP010000000
VERSION     DASCQP010000321.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3316)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3316)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3316
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001176155"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1376
                     /locus_tag="QF480_05540"
     CDS             <1..1376
                     /locus_tag="QF480_05540"
                     /inference="COORDINATES: protein motif:HMM:NF036968.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06058.1"
                     /translation="LKKAETNGCFYIESPATRGLLKKLKCDNYLTLVAASSIIRPGVA
                     KSGMMREYIYRFHNPDSFEHIHPVMKEQLGETYGVMVYQEDVLKVCHHFAGLDLSDAD
                     VLRRAMSGKYRGKREFQRIVEKFFSNCKERGYPDEITNEVWRQIESFAGYSFSKAHSA
                     SYAVESFQSLYLKAHYPLEFQVAVINNFGGFYHSWVYFNEAKRQGGNLHLPCVNNSDF
                     NTNITGNNIYIGLVHISKLENKLANAIVDERTHNGKYTGLENFIQRIRPGIEQLLLLV
                     KVNALRFTDKPKSQLLWESHLLQKTNKQLPKAVRLFESRGKQYELPTLMHNKLEDAYD
                     EIELLGFPVSTTFFNMLKTDFRGEIRACELDNMIGKRARMIGLLVTIKYVKTVKKEMM
                     HFGTFLDDQGEFFDTTHFPDSLKRYPFRGHGVYLILGKVVTEFGYASIEVEKLAKLPL
                     QGDPREE"
     regulatory      1432..1527
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            1575..>3316
                     /locus_tag="QF480_05545"
     CDS             1575..>3316
                     /locus_tag="QF480_05545"
                     /inference="COORDINATES: protein motif:HMM:NF012801.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HJN06059.1"
                     /translation="MQKNYLLFIVMAFLPLVMNAQNTVSGKVTNSSNGLPLSGAHIIV
                     LDTKFSAISDANGYYLITGLSFDTYTLKASYIGFESRTIELNVNKNIEQNVALHPSVV
                     MSDEVIITAIRATDESPITYKIMDQAEIAEKNSGKDLPYILNSTPSTVVSSDAGAGIG
                     YTGLRIRGTDLTGINVTLNGVPVNDGESHSVYFVDLPDLASSINDVQVQRGVGTSTNG
                     AASFGASINIKTGDNNPDPHAEFSSYFGSFNTKNYSLSFGSGLLNDKWNISGRVSSIK
                     SDGYVDRASSNLKSAYFSGSYYGKKDILKAIVLLGDEKTYQSWYGVPKDSLKTNRTYN
                     PAGEIYDNEGNFMGYYDNQTDNYIQNYYQLHYAHQFNNKLNIVSTAFLTTGKGYYESY
                     KNDEEFTSYGLNDTIIGNDTITNTNLIQQKWLDNKFYGINLAANYTSGKLKLNIGGGW
                     SYYDGDHYGKIVWAQIATLGLYDRNWYFNTGTKSDFNLFAKANFKLSDKINLYGDLQY
                     RGINYKIKGTHDDLQDLTQSHKFNFFNPKAGIYYKINDKQNLYLSVGIANREPNRSVY
                     RDADTSQNISPERLT"
BASE COUNT         1120 a          589 c          642 g          965 t
ORIGIN      
        1 aacttaaaaa agccgaaaca aacggatgct tctatataga aagtccagca acaagggggt
       61 tacttaaaaa acttaagtgc gacaattacc ttaccctggt tgctgccagt tcgataatac
      121 gtcccggagt agctaaatca ggtatgatgc gcgaatacat ttaccgtttc cataaccctg
      181 acagttttga acatatccac ccggtgatga aagaacagct gggagaaaca tacggcgtga
      241 tggtttacca ggaagatgtg cttaaggtat gtcatcattt tgccggcctc gatttatccg
      301 atgccgatgt gttacgcaga gcgatgagtg gtaaatacag aggaaagcgt gaatttcaac
      361 gcattgtaga aaaatttttt agcaattgta aagaaagggg ctaccccgat gagataacaa
      421 atgaggtttg gcgccagatc gaaagctttg caggctactc attctcaaaa gcacactcag
      481 cgtcatacgc tgttgaaagt ttccagagcc tgtatctaaa agcacactac ccactcgaat
      541 tccaggtagc agtgataaac aattttggag gattctatca ttcgtgggtt tattttaacg
      601 aagcaaaacg tcagggagga aatcttcacc tgccttgtgt gaataatagt gactttaaca
      661 ccaatatcac gggcaataac atttacatcg gactggtaca tatttcaaaa ctcgaaaaca
      721 aactggcaaa tgccattgtt gatgagcgta ctcacaatgg aaagtacact ggtcttgaga
      781 atttcataca gcgtatcagg cccggaattg agcaattgct tctactggtt aaggttaatg
      841 cattacgttt tacagataaa ccaaaatcgc agttactatg ggaatcccat ctattacaaa
      901 aaaccaacaa acagcttcca aaagcagttc gtctgttcga aagccgtggc aaacaatatg
      961 aacttccaac acttatgcat aataagttag aagatgctta tgacgaaata gagttgctgg
     1021 gatttcccgt cagcacaaca ttttttaata tgctaaaaac agatttcaga ggtgagataa
     1081 gagcatgtga actagataat atgattggga aaagagcacg aatgattggg ctattggtta
     1141 ccatcaagta tgtaaaaact gtgaaaaagg aaatgatgca ctttggtact tttttagatg
     1201 accaaggtga gttcttcgat actacacatt tccctgattc acttaaaaga tatcctttca
     1261 gaggacatgg tgtttatctt atactgggca aagttgttac cgaatttggc tatgcaagta
     1321 ttgaagtgga aaagcttgcg aagttgcctt tgcaaggcga tccacgtgaa gaataattaa
     1381 attcgataaa cacttgcagc atatattaaa cttatttata aatttgtacc taattaccaa
     1441 taggggtgcc tcaaaacaag ggctgagatc ataccctctg aacctgatcc ggataatgcc
     1501 ggtgtaggaa aagagattac aacccattag gctttcttct attgatttat aaatgttata
     1561 aaatcaacag aattatgcaa aaaaattatt tattattcat cgttatggca tttctacctt
     1621 tagttatgaa tgcccaaaat acagtgtcgg gtaaagttac taatagtagt aacggattac
     1681 ctttatcagg tgcacatatc attgttctgg acacaaagtt ctctgctata tcagatgcta
     1741 atggttatta tctaataact gggttatcat ttgacacata cacacttaag gcttcgtaca
     1801 ttggttttga atctcgcaca attgaattaa atgttaataa aaatattgaa caaaacgttg
     1861 ccttacatcc atctgtagta atgagtgatg aggttataat tactgcgatc agagccactg
     1921 atgaatcacc aataacatat aaaattatgg atcaagctga aattgcagag aagaattcag
     1981 gtaaagacct cccctatata cttaactcaa ctccatccac agtggtttct tcggatgcag
     2041 gagctggtat aggttatacc gggcttagga taagagggac agacctgaca ggtataaacg
     2101 ttaccctaaa tggtgtacct gttaatgacg gagaatctca tagtgtatat tttgttgacc
     2161 tacctgatct tgcatcatcc attaacgatg tccaggtaca gcgaggtgtt ggtacttcga
     2221 caaacggagc tgcttcattt ggtgccagta ttaacattaa gactggagat aataatcccg
     2281 atccacacgc ggagttcagc agttattttg gttcttttaa tactaagaat tatagcttat
     2341 cttttggttc tggattatta aacgataagt ggaatatttc aggtagagtt tcatccatta
     2401 aatcagatgg ttacgttgac cgcgcttcat caaatcttaa atcagcatat ttttcaggtt
     2461 cgtattatgg gaaaaaagat attctcaaag caattgtatt attaggcgat gaaaaaacat
     2521 accaatcgtg gtacggagtt ccaaaggata gtttgaaaac aaacaggact tataatcctg
     2581 ccggtgagat ttatgacaac gaaggtaatt ttatggggta ttatgataac caaactgaca
     2641 attatattca aaattattat caattgcatt atgctcatca atttaataat aaactaaata
     2701 ttgtctcaac tgcttttctc acaacgggta agggttatta cgaaagttat aagaacgacg
     2761 aagagtttac cagttatggt ttgaatgata caattattgg aaatgatact attaccaaca
     2821 caaaccttat tcaacaaaag tggctggata ataagttcta tggaattaat ctggcagcaa
     2881 attatacttc tggcaaatta aagttgaaca ttggaggtgg ctggagttat tatgatggag
     2941 atcattatgg aaaaattgta tgggctcaga ttgctacttt aggactatat gacagaaact
     3001 ggtatttcaa cacgggaact aaatcagatt ttaatctttt tgcaaaagca aacttcaaac
     3061 taagtgataa aataaatctt tacggagatt tacaatacag gggcattaat tacaaaatta
     3121 agggcacaca tgatgatcta caagatctca cgcaatcaca caagttcaat ttcttcaacc
     3181 caaaagctgg catctactat aagattaatg ataaacaaaa tctatactta tctgttggga
     3241 tagcaaatcg tgaacctaac cgatcagtat acagagatgc tgatacttcc caaaatattt
     3301 ccccagagcg cctcac
//
LOCUS       DASCQP010000322         2237 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001185111, whole genome shotgun sequence.
ACCESSION   DASCQP010000322 DASCQP010000000
VERSION     DASCQP010000322.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2237)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2237)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2237
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001185111"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            167..1594
                     /locus_tag="QF480_05550"
     CDS             167..1594
                     /locus_tag="QF480_05550"
                     /inference="COORDINATES: protein motif:HMM:NF012686.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:solute symporter family protein"
                     /protein_id="HJN06060.1"
                     /translation="MNWLIFWIVLYLVVVIVLSLRHIKSSDLEQYLVNNRNTRTLPLV
                     FTVLATFVGGGTSIGLMAMGYESGLAAVGIGIAYVIGFIIMFFFAGKIRTLGFTRKIY
                     SLPHFLNHSYTSSENPGFAKIFSATVSGVNIFIFFFLLAAQFVAMASLLKFSFEIGYT
                     SAAIISAIIVILYTAIAGLSGVIITDMIQFIAIVIMIVLIFIPGIIDDTAFLSRFEEL
                     PESMINGSHYGWIFLIALPLFLSWSVLVRMDIWQRILAAKNEKTARKVSIISGLGMLP
                     FYIIFPMVGMAIRIISNESVDPKDVACIFIDRHSSGFIFGFAIVGLLSALMSSGDSFF
                     NIISISAVKDFAGWGKAGDGTNIYSMIRITTIGFGIIALFVSLAFPYIVDLMIVGIST
                     IALFVPITLFALISKNAFKHRKIALASILSGFVVNTILFTWGIIFPEEFSAKSSFIPA
                     FIVAAIVLIIGVNVKKGSKSKLMNK"
     gene            1612..2067
                     /locus_tag="QF480_05555"
     CDS             1612..2067
                     /locus_tag="QF480_05555"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006798803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0052717 - tRNA-specific adenosine-34
                     deaminase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside deaminase"
                     /protein_id="HJN06061.1"
                     /translation="MLPPYSDDHFMKAALKEAEIAFESGEVPVGALITCNNQIIAKAH
                     NLTETLNDVTAHAEMQAFTSASDFIGGKYLHDCTLYVTLEPCIMCAGASYWTQIGRIV
                     FGAHDPKRGYSKVGRPITHPKTKIIGGILEDNCGNLLSQFFNEKRNLEK"
BASE COUNT          664 a          351 c          432 g          790 t
ORIGIN      
        1 tgttccattc aggttaaagc atcggaaaat cctgtattct taaaaacaca agataaaaat
       61 ggtaatgaag tcgagaaatt ttatgttcgt tcaggtaatg cctcaaagga aatttcatct
      121 ctaaaagaga ttaatgaata tattaatgta agatttaata actaaaatga attggttaat
      181 attttggatt gttctttatt tagtggttgt aattgtcctt tcattacgcc atattaagtc
      241 atccgactta gagcaatacc ttgttaataa ccgtaataca cgcacgctgc cattagtgtt
      301 tactgtgctc gccacttttg ttggaggagg cacatcaatt ggattaatgg cgatgggata
      361 tgagtcgggt ttggctgctg ttggtattgg aattgcctat gtaataggat ttattattat
      421 gttctttttt gcaggaaaga taagaactct ggggtttaca cgaaaaattt atagcctgcc
      481 tcattttctt aatcacagtt atacatcaag cgaaaatccg ggttttgcca agattttctc
      541 agcaacagtt agtggcgtga acatttttat attctttttt ctgcttgctg cccaatttgt
      601 tgccatggca agcttactga aattttcatt tgaaataggt tatacttccg cagcaattat
      661 ttcagcaatt attgtaatcc tatatacagc tattgccgga ttgtcaggtg taataataac
      721 tgacatgatc cagttcattg cgatagttat tatgattgtg ttgatcttta ttcctggaat
      781 tatagatgac acggcatttt taagccgttt tgaggagtta ccagaaagta tgattaatgg
      841 atcacattat ggctggatat ttttaattgc attaccactc tttttatcat ggtcggtatt
      901 ggtacgcatg gatatctggc aacgtattct tgctgcaaaa aatgaaaaaa cggctcgtaa
      961 ggttagtatt atttcaggct taggaatgct acctttttat attattttcc caatggtggg
     1021 aatggctatt cgaattatat ctaacgaatc tgttgatcca aaagatgttg cttgtatttt
     1081 tatagataga cacagcagtg ggtttatttt tggctttgca atagttggtt tgctatcggc
     1141 acttatgtca tccggtgata gtttttttaa tattatttcg atatcagccg ttaaagattt
     1201 tgctggttgg ggcaaagccg gtgatggtac taatatttac tcaatgataa ggatcacaac
     1261 gattggtttt gggataattg ctttgtttgt gtctttggct tttccatata ttgttgatct
     1321 tatgatcgtt gggatctcaa ccattgccct ttttgttcca ataactttat ttgccctaat
     1381 ttctaaaaat gcttttaagc atcgcaaaat agcattagca agcatactat caggttttgt
     1441 ggtcaatact atactattca cctggggaat aatttttcct gaagagtttt ctgctaaatc
     1501 atcatttatc ccagctttta ttgttgcggc aattgtgttg atcataggtg taaatgtgaa
     1561 aaaaggtagt aagtcaaaat taatgaacaa ataacagaaa aatacattct tatgttacct
     1621 ccctattctg atgatcattt tatgaaagca gctcttaaag aggcagaaat tgcttttgaa
     1681 agcggtgagg tgcctgtggg ggctttgatt acatgtaata atcagataat tgctaaggct
     1741 cataacttaa ccgaaacatt aaatgatgta acggcacatg ctgagatgca agcatttaca
     1801 tctgcttccg attttattgg tggaaagtat cttcatgatt gtacacttta tgttactctc
     1861 gaaccatgta ttatgtgtgc cggagcttca tattggaccc agattggtag aatagttttt
     1921 ggtgcacacg accctaaaag agggtactcc aaagttggca gaccaattac tcatcctaaa
     1981 acaaaaatta ttggaggcat actagaagat aattgcggca atcttttaag ccaattcttt
     2041 aatgaaaaaa gaaaccttga gaaatgatta atgtttctag cataataaag gatctttgat
     2101 aacccggtgg ataatataaa ttaatgctga ttttgcaaca acatattgtt cctgaaggaa
     2161 tacccagaat acgtttgttg gattatgcac tacaggtatt tactacaatt ccttcccgta
     2221 gcaatatgaa aaaggtt
//
LOCUS       DASCQP010000323         2472 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001189358, whole genome shotgun sequence.
ACCESSION   DASCQP010000323 DASCQP010000000
VERSION     DASCQP010000323.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2472)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2472)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2472
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001189358"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..505
                     /locus_tag="QF480_05560"
     CDS             <1..505
                     /locus_tag="QF480_05560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06062.1"
                     /translation="KLLNENKIRLLKGQSDVGYSYPETAKYNAVITKTHLIHNLEVTD
                     NTIKESCIDKGKIHVNQGYTRCNLLPINNDNFITSDEGIYHTLVTNKLNVLYVDPQEI
                     LLPGFKNGFIGGACGVYQNRIFIIGSLINLSNGEQMASFVKEAGYQVIELCEGPLFDC
                     GSLIFID"
     gene            690..1502
                     /locus_tag="QF480_05565"
     CDS             690..1502
                     /locus_tag="QF480_05565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004289573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen/starch synthase"
                     /protein_id="HJN06063.1"
                     /translation="MEKKRVLYVNQEIMPYLPETHISKIGRFLPQKTQESGKEIRTFM
                     PRYGLVNERRNQLHEVIRLSGMNLIIDDIDHPLIIKVASIQQARMQVYFIDNEDYFHR
                     KFLFRDKNDTFFEDNDERTVFFSKGVLETVKKLGWAPDVVHAHGWFSSLIPLYIRTAY
                     KDNPIFGDLKIIFSLYDDDFSEGFKDGFTEKIVMNGLNKSDLKHYKDGTYVSMMKGAI
                     DRSDALIQGSAEIDPEILKYAKASGKPMLDYIEDENYYVAYNKFYDKIIGED"
     gene            1477..>2472
                     /locus_tag="QF480_05570"
     CDS             1477..>2472
                     /locus_tag="QF480_05570"
                     /inference="COORDINATES: protein motif:HMM:NF025458.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4270 family protein"
                     /protein_id="HJN06064.1"
                     /translation="MIKLSEKISKSIISSAVFSLLSFIILSFLFNSCSKKAGQIGFVI
                     QPEDSKLQVAFTDTSSIYGYSELLDSIRSDKLSVSAFGSLKDPVFGGTTAGFYTQFIL
                     SVNGHDFGEDRQLDSLILTLNYEGVYGDTNVILTAHTYEMLEGISKDSIYYSNLQLPL
                     DPTDYSNFSFMPRPNDSIVIDGDTLKPIVWMNLSNISTALGDKLLNADSAEMDDSETF
                     QEYFKGLFIQSQPVYEDGAIVYFGLSSTYSKLSLYYSNSEQDSLRYDYIITTTTATVN
                     KYEHEYNSSSPDFKAQVINGDTMLGSQKFYVQGYGGVQTIIKFPYLIKWAQLGNVA"
BASE COUNT          833 a          384 c          444 g          811 t
ORIGIN      
        1 caaattatta aatgagaata agatacgatt attgaaaggg caaagtgatg ttggctatag
       61 ttatcccgaa acagcaaaat ataatgctgt tatcaccaag actcatctta ttcataattt
      121 agaagttacc gataacacaa ttaaggaatc ttgtattgat aaaggtaaaa ttcacgttaa
      181 tcagggatac acaagatgta atctgctacc aattaataat gataacttta ttacatccga
      241 cgaaggaatt tatcatacat tagtcactaa taaacttaat gtactttatg ttgaccctca
      301 ggagattcta cttccgggat ttaaaaatgg atttattgga ggtgcttgtg gggtctatca
      361 aaatcgcatt tttataatag gtagcttaat caatctctct aacggtgaac aaatggcgtc
      421 atttgtaaaa gaagctgggt atcaagttat tgagttgtgt gagggaccat tatttgattg
      481 cggcagtttg atatttattg attgaccttc caaccttttt gcacataact aaatgctgtg
      541 atataactcc taacaataag ttagattttt gttgacttaa atcaaataca ctattaccag
      601 tcgcaattca ctattaaata tcaagttaat tgattgatac gggttttttt actatttttg
      661 caccctgaaa atttactaat tacaacgtta tggaaaaaaa gagggttcta tatgtaaatc
      721 aagagattat gccctatctg cccgagactc acattagcaa gataggacgt tttctacctc
      781 aaaaaacgca ggaatctgga aaagaaatac gtacattcat gcctcgttat ggtttagtaa
      841 acgaaaggag aaatcaactc catgaggtaa taaggttatc tggcatgaat cttattattg
      901 atgacatcga ccaccctctg ataattaaag ttgcatctat acaacaagca aggatgcaag
      961 tttattttat tgataatgaa gactatttcc atcgtaaatt tttatttaga gataaaaatg
     1021 atactttttt tgaggataat gatgaaagaa cagttttctt ttcgaagggt gtattagaaa
     1081 ctgtaaaaaa acttggttgg gctcctgatg ttgttcatgc ccacggctgg ttttcaagcc
     1141 ttattcctct ttacataaga actgcatata aagataatcc tatattcggt gatctgaaaa
     1201 ttattttctc attgtatgat gacgattttt cggaaggatt taaagatgga tttactgaaa
     1261 aaattgtcat gaacggtcta aataaaagtg accttaaaca ctataaagac ggaacatacg
     1321 tttcgatgat gaaaggtgct attgatagat cagatgcact gatccaggga agtgcggaaa
     1381 tagacccaga aatacttaaa tatgcaaagg catctggaaa acctatgcta gattatattg
     1441 aagatgagaa ttattatgtt gcgtacaata aattttatga taaaattatc ggagaagatt
     1501 agtaaatcaa taatttcgtc tgctgttttc agtctgcttt ccttcattat actttcgttt
     1561 ctatttaatt cgtgttccaa gaaggccgga caaattggtt ttgtaattca acctgaagac
     1621 agcaaactcc aagttgcctt tacagataca tcttcaattt atggctattc ggaactctta
     1681 gactcaataa ggtccgacaa attaagtgtt agtgcctttg gtagtttgaa ggatccagta
     1741 tttggcggta ctactgcagg attttacaca caattcatcc tttccgttaa tggtcatgat
     1801 tttggagaag atagacaatt agattcattg atactcacac taaattatga aggggtttat
     1861 ggtgacacaa atgttatact tactgctcat acttatgaaa tgttagaagg tataagtaaa
     1921 gacagtatct attattcaaa tctgcaactt cctcttgatc ctacggatta tagcaatttt
     1981 tcgtttatgc cgagacctaa tgatagtatt gtgatagatg gagacacact taaaccaata
     2041 gtctggatga atttatcaaa tattagcact gctcttggtg ataaattact aaatgcagat
     2101 tctgcagaaa tggacgatag tgaaacattt caggagtact ttaaagggct ttttattcag
     2161 tcgcaacctg tttatgagga tggtgcaata gtatatttcg gtctttcctc aacatactca
     2221 aaactatcat tatattacag caacagtgaa caagactcac ttaggtatga ttatattata
     2281 actactacaa ccgctactgt aaataaatat gagcatgaat ataatagttc cagccctgat
     2341 tttaaagcac aggtaattaa tggtgatact atgttaggat cacaaaaatt ttatgttcag
     2401 gggtatgggg gtgttcaaac aatcattaaa ttcccttatt tgataaaatg ggctcaactc
     2461 ggaaatgttg ca
//
LOCUS       DASCQP010000324         1814 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001189963, whole genome shotgun sequence.
ACCESSION   DASCQP010000324 DASCQP010000000
VERSION     DASCQP010000324.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1814)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1814)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1814
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001189963"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1279
                     /locus_tag="QF480_05575"
     CDS             <1..1279
                     /locus_tag="QF480_05575"
                     /inference="COORDINATES: protein motif:HMM:TIGR04131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="gliding motility-associated C-terminal
                     domain-containing protein"
                     /protein_id="HJN06065.1"
                     /translation="TVFDNNNTYYLDTTTQPCDQNFQYAIATIDSCRIVSPGSFSTPL
                     RPIFLYNIDYDICSETNSLSWEPYINASPSLEKYEIWSSKNNGPITLIDEVAPNVEYY
                     NHTSVDNTTEYVYFVRAVFGNYTSSSCTKSIITGNYIKPALVYLANANVLPDNNIELT
                     IDVDLQPNSCTWEILRSDAGGGSQTILTSLSRNIISTSPIIYLDETADGSVGFYTYSI
                     NVLDSCGVLSLQSNTMKTIFLEGEQLSDIANHLSWNSFEGFDEGVDKYYIFRMLGEVA
                     PILPIDSTDAQTDEYTDDISLVEAGESIFSYWVQAYEESENIYGYREKSNSNIISLFR
                     ETDLYFPNAFRPDGTNRIFKPVATGFGGSNYLFQIFNRWGQLIFESTDPELGWDGNYK
                     GNSSPQGTYIYRLVYQNVYNVTKQQQGTVMLID"
     gene            1450..>1814
                     /locus_tag="QF480_05580"
     CDS             1450..>1814
                     /locus_tag="QF480_05580"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005941314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HJN06066.1"
                     /translation="MSLDSDKFKAKGLTFDDVLLVPDHSTVLPRETNLNTSFSKNISL
                     RIPIVSAAMDTVTESKMAIAIAQEGGIGVIHKNLNIQVQANEVHKVKRAENGLIPDPI
                     TLHKEAKVRDALNIMAEYS"
BASE COUNT          597 a          293 c          326 g          598 t
ORIGIN      
        1 cactgttttt gacaataata atacttacta tttagatact acaacacaac cttgtgatca
       61 aaatttccag tatgcaattg ccaccattga tagctgtaga attgttagtc ctggttcttt
      121 ctccacaccg ttgcgaccta tatttttata taatatagat tatgatatct gttcagaaac
      181 gaattcactg tcatgggaac catatataaa tgcgtcacca tcattggaga aatacgaaat
      241 ctggtcatca aaaaataatg gaccaattac tcttattgat gaagttgctc caaatgttga
      301 atattataat cacacttcag tggataatac aactgagtat gtatattttg tgagagctgt
      361 atttggaaat tatacttcat catcgtgtac taaatctatt ataacaggta attatatcaa
      421 acctgcttta gtatatttag caaatgccaa cgtgctacca gataacaata tagagttgac
      481 cattgatgtt gaccttcagc ccaattcttg cacatgggaa attctcagaa gtgatgctgg
      541 gggtggttca caaacgattt taacctcatt gtcacgtaat attataagca cttcgccaat
      601 tatatattta gatgaaactg ctgatggttc agttggattt tacacttatt caattaatgt
      661 attagatagt tgcggtgtcc tatccttaca atcaaataca atgaaaacga ttttccttga
      721 aggtgaacaa ttatccgata ttgcgaatca tctttcatgg aattcttttg aaggatttga
      781 tgaaggggtt gataaatatt atattttcag gatgttaggt gaggtagcac caattttacc
      841 aattgattca acagatgctc aaaccgatga atatactgat gatatctcgc tggtagaagc
      901 aggtgagagt atattttcct attgggtaca agcctatgag gaaagtgaga atatttatgg
      961 ttacagggaa aaaagtaatt ctaacattat aagtttgttt cgagaaactg atttgtattt
     1021 tcctaacgca tttcgtcctg atggcactaa taggattttt aaacctgtcg ctacggggtt
     1081 tggaggctca aactaccttt ttcagatttt taacaggtgg ggtcaactaa tctttgaatc
     1141 aacagatccg gaacttggat gggatggaaa ttataaggga aactcatcgc cacagggcac
     1201 atatatttat cggctagttt atcaaaatgt ttataacgta acaaagcaac agcaaggtac
     1261 agtaatgttg attgactgat attttattga ataattggtc attagttctc aagcacctat
     1321 cccattatct aattggtgaa tcacacaatc atagttaaat catgttaaat ctatcatata
     1381 tgttcaaatt cattaatatt catatcgtaa ttttttggta cttttggcaa attttaaatc
     1441 aaggaaaata tgtcactcga tagcgataaa ttcaaagcaa aaggtcttac attcgatgat
     1501 gttcttctgg ttcctgatca ttcgacagta ttaccacgcg aaactaattt aaacacaagt
     1561 ttttcaaaaa atattagttt aagaattcct attgtaagtg ctgccatgga tacagtaact
     1621 gaatcgaaga tggcaattgc tattgctcag gaaggtggta ttggagttat tcataaaaac
     1681 ttaaatatcc aggttcaggc aaatgaggtt cataaagtaa aacgagctga gaatggctta
     1741 attcctgacc ctatcacact tcacaaggaa gcgaaggtta gggatgccct taatataatg
     1801 gctgaatata gtat
//
LOCUS       DASCQP010000325         1699 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001192009, whole genome shotgun sequence.
ACCESSION   DASCQP010000325 DASCQP010000000
VERSION     DASCQP010000325.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1699)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1699)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1699
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001192009"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..440
                     /locus_tag="QF480_05585"
     CDS             <1..440
                     /locus_tag="QF480_05585"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN06067.1"
                     /translation="YTYTWYKNGLIIPDADGQYYYKEGGIEDGTYFARVENAYNCTSE
                     SKKYTYPDGNKGLFVNSADLFIVYPNPSNGQFEIGLNDVNIPLGVSSITANIYSITGK
                     RIYSELLVNSISQFHLIDLRVGIYIIELRIEKGQRQIKKLIIQ"
     gene            481..765
                     /locus_tag="QF480_05590"
     CDS             481..765
                     /locus_tag="QF480_05590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06068.1"
                     /translation="MKEIEIVLVYQENKYSMKVEDTTKSITEALKDIVEALQLSWQDA
                     GGNPITYHLGRNTEEEEILRPKFQGREQTLFDYKIQQGDELILIKEVIAG"
     gene            815..1555
                     /locus_tag="QF480_05595"
     CDS             815..1555
                     /locus_tag="QF480_05595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06069.1"
                     /translation="MTKIKISTFQEKKKKQNTFEGYDKKVLTPQGKKLLKEWKKVDSL
                     CQESDIITYIIRRRNRGGLPVEYEIIYGLKSIVGVNEPSTSNSSSENQLPREPIYGDE
                     HHLSIILPNNYPSAFGGNPEFKMLTNTWHPNIRATGKFKGRICLNNKDLGVTVGLDER
                     IIRVGKYLQYQVYWANESYPWPEDKTVAEWVREEAEPSGWINIKEGIFSDYSNLSKIV
                     KSAEPHVFIEKKDNKKSESGDKNLTIKI"
BASE COUNT          652 a          244 c          324 g          479 t
ORIGIN      
        1 agtatacata tacctggtat aagaatggct taataattcc tgatgcagac gggcaatatt
       61 attataaaga aggtggaatt gaggatggaa cttattttgc tcgtgtggag aatgcctaca
      121 attgtacttc cgaatcaaaa aaatatacat atcctgatgg aaataagggg ctatttgtaa
      181 atagtgcaga tctttttata gtttatccta atccatcaaa cggtcagttt gaaattggac
      241 tgaacgatgt caatataccg ttaggggttt cttcaataac agcaaacatt tattccataa
      301 ccggtaaaag gatctattca gaattactag taaactcaat atcgcaattt catttgattg
      361 atcttagagt tggaatatat atcatcgaat taagaattga gaaaggccaa agacagatta
      421 aaaaattaat catccaataa ttgttaacga attgtactca actattaaaa gattatagaa
      481 atgaaagaaa tagaaattgt attggtttac caggaaaaca aatattcaat gaaggttgaa
      541 gatactacta aatcaattac tgaagctctc aaagatattg ttgaagcatt acaattatca
      601 tggcaagatg caggtggcaa tcccattacc taccacttag gaagaaatac agaagaagaa
      661 gaaatactta gaccaaaatt tcaaggtagg gagcaaacgc tgtttgatta taagatacag
      721 cagggagatg aattaattct aattaaagaa gtaattgctg gttagaagtc taattaacaa
      781 acatgtgaaa tattattaga aaggtcaata aaaaatgaca aagattaaaa tatcaacttt
      841 tcaggaaaag aaaaaaaagc agaatacttt tgagggatat gacaaaaaag ttcttacccc
      901 acaaggaaaa aagctactaa aagaatggaa gaaagttgat agcctttgcc aggaaagtga
      961 tataattacc tatattatcc gaagaagaaa tagaggaggc cttcctgttg aatacgagat
     1021 tatctacggt ttgaaaagta ttgttggggt taacgaaccc tcaaccagca attcatcttc
     1081 tgaaaaccaa ttgccaagag aaccaatata cggtgatgag catcacttga gtattatact
     1141 tcccaataac tacccaagtg cttttggcgg aaatcccgag tttaaaatgt tgactaacac
     1201 ctggcatccc aacataaggg ctactggaaa gtttaaaggg agaatatgct tgaataacaa
     1261 agatctaggt gttactgtcg ggcttgatga acgtattatt cgggttggga aatatttgca
     1321 atatcaggtt tattgggcaa atgaaagtta tccatggcca gaagataaaa ctgtggcaga
     1381 atgggttagg gaagaggcag aacctagtgg gtggataaat attaaagaag gaattttttc
     1441 tgattactca aacctttcca aaattgttaa gtcggctgaa cctcatgttt ttattgaaaa
     1501 gaaagataat aagaaatctg aatccgggga caaaaacctc actattaaaa tctgattctg
     1561 gagaaaaaaa ctatgtttta cgataaaatt aggaatattc gattacacaa gctgttaagt
     1621 ttgataatag ttttctacat attgatatgt gctcctttag caactgcaca aactacaata
     1681 acatacggtg aaaatagat
//
LOCUS       DASCQP010000326         1892 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001192524, whole genome shotgun sequence.
ACCESSION   DASCQP010000326 DASCQP010000000
VERSION     DASCQP010000326.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1892)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1892)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1892
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001192524"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(101..820)
                     /locus_tag="QF480_05600"
     CDS             complement(101..820)
                     /locus_tag="QF480_05600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008769979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HJN06070.1"
                     /translation="MLENENMINILFAEDDANLSMILTDYLEMVGYSVDHAPDGEECV
                     KLFKENNYQLVILDVMMPIKDGFTTAKEIREINQLVPIVFLTAKNLKEDRIKGFQFGC
                     DDYISKPFSTEELSLRIKAILKRCTVIDQLSNEPFNESITIGKFVFDSSNMTLKFENS
                     ERSLTRKEAGLLKLLCVNINNLVPREVAMVTIWGENDYFIGRSMDVFIAKLRKYLKPD
                     PNVKINNIHGIGFKLEVLDSD"
     gene            complement(825..>1892)
                     /locus_tag="QF480_05605"
     CDS             complement(825..>1892)
                     /locus_tag="QF480_05605"
                     /inference="COORDINATES: protein motif:HMM:NF014567.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HJN06071.1"
                     /translation="RKTKLSIDDYIEAHLIDSLIADELKCMFINTTYYYGIYSNYNHR
                     FVLGKYKNHEIELVNSLFQFSLSGIYKPGNYFLSVSFPSKTYELLHRMKLWVFLTVLF
                     LVILIISLTFVIFTLLHQKKISEIKTDFINNMTHEFKTPIATSSLAAEMIQREEVIVN
                     PKKINKYAAIILDENNRLQNQVEQVLQIAILESGNQQFKIRRTNVHELLEGALNSFEL
                     RIKEEKIKLKLKLSATNPNVMADKVHLLNIFYNLIDNAIKYTPENPVIIVSTWNENNN
                     IKISVKDNGIGISKDNQQNIFKNLFRVPIGNIHEVRGFGLGLYYVKTVIDQFGGKIKL
                     TSDLGKGSDFELSFRSSTIKT"
BASE COUNT          602 a          311 c          272 g          707 t
ORIGIN      
        1 gaccttttgt ctcagagtca acgttaaatt tgagagttga acttaacctg cgcttaagga
       61 gtaaactgat caatataacc gtaatattca agagacaatt ttaatctgaa tccaaaactt
      121 caagtttaaa gccaatgcca tgaatattgt taatctttac atttgggtca ggtttcaaat
      181 attttctaag ttttgcaata aaaacatcca tacttctacc aataaagtaa tcattctcac
      241 cccatattgt taccattgca acttctcggg gcactaggtt attaatgttt acgcatagta
      301 gttttaaaag ccccgcttct ttacgtgtta atgatctttc tgaattttca aacttcaaag
      361 tcatatttga actatcaaac acaaattttc caatagtaat tgattcatta aaaggttcat
      421 ttgataattg atcgataaca gtacatcttt taagaattgc ctttatgcgc aggctaagtt
      481 cttcagtact aaagggtttg gatatatagt cgtcgcaacc aaactgaaaa cctttaattc
      541 gatcctcttt caggtttttg gcagttaaga atacaattgg tactaactga ttaatttctc
      601 ttatttcttt tgctgttgta aatccgtctt ttattggcat cataacatca agaataacaa
      661 gttggtaatt gttttcttta aataatttta cacattcttc accatcagga gcatgatcca
      721 cagagtagcc aaccatttcc aaataatcag taagtatcat acttaggtta gcatcgtctt
      781 cagcaaataa aatattaatc atattttcat tttctagcat aaaattaagt ttttattgta
      841 cttgaacgga aagaaagttc aaaatccgat cccttaccta aatcacttgt aagttttatt
      901 ttgcctccaa actgatcaat aacagttttt acataatata gacctaatcc aaatcctcta
      961 acttcatgaa tgtttccgat tggaacacga aacaggttct taaagatgtt ttgttggttg
     1021 tctttactaa taccaatgcc attatcttta actgatattt taatattatt gttttcattc
     1081 catgtagata caataataac aggattttca ggagtatatt taattgcatt gtcaattagg
     1141 ttgtaaaaaa tatttagtaa atgtaccttg tcagccataa cattagggtt agtagccgat
     1201 agttttagtt taagctttat tttttcttct tttatcctta gctcgaaact atttaaagct
     1261 ccttccagaa gttcatgaac gttagttctc ctaattttaa attgctgatt accgctttct
     1321 agtattgcaa tttgcaaaac ttgttctact tggttctgaa gtcggttgtt ttcatcaaga
     1381 attattgcag catatttatt tatttttttt ggatttacaa ttacttcttc tctttgtatc
     1441 atttcggccg caagcgatga tgtagcaatt ggtgttttaa attcgtgagt catattatta
     1501 ataaaatcag tttttatttc cgatatcttt ttttgatgaa gcaatgtgaa tattacaaat
     1561 gtaagactga ttatcaatat cactaaaaac aaaaccgtta ggaaaaccca taacttcatg
     1621 cgatgaagaa gttcatatgt tttgcttgga aaacttacgc taagaaagta attgccgggc
     1681 ttgtaaatac ctgatagtga gaactgaaaa agcgagttta ctaattcaat ttcatgattc
     1741 ttatacttac caagaacaaa tctatggtta tagttgctat aaattccata ataatatgtt
     1801 gtgttgatga acatgcattt taattcgtcg gctataagcg aatcaattaa atgtgcttct
     1861 atataatcat caatgcttaa tttggttttt cg
//
LOCUS       DASCQP010000327         3119 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001193569, whole genome shotgun sequence.
ACCESSION   DASCQP010000327 DASCQP010000000
VERSION     DASCQP010000327.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3119)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3119)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3119
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001193569"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..390
                     /locus_tag="QF480_05610"
     CDS             <1..390
                     /locus_tag="QF480_05610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018360064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HJN06072.1"
                     /translation="QSTFRRVPTSFHEQTHDVDWVIHPDLKTHPQYELALTQMDGPGA
                     MISFGLKGGLTAGKKVMNNVRLALLAVSLGGIETLIQHPASMTHSKLSKAARESGGIS
                     DGLVRLSVGIEDIDDIIADLENALSKA"
     gene            519..2798
                     /locus_tag="QF480_05615"
     CDS             519..2798
                     /locus_tag="QF480_05615"
                     /inference="COORDINATES: protein motif:HMM:NF013862.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HJN06073.1"
                     /translation="MFRKILLLILFVLPFSLASQQVALVLSGGGAKAYSHIGVLKALE
                     ENNIPIDYIVGNSMGALIGALYSAGYTPEEIELFLTDPNFLNLSKNSSYGNRSLFQKI
                     EPDAALVNFPFNIDKGLKIQLPISVYNFKEIDYALMEYFSGASAVSGNNFDSLMIPFR
                     CVAADIDSSRLVSFENGNLANAVRASITFPFFVRPIEIDSILFFDGGMYNNFPVNIAI
                     NEFHPDFIIGSKAVNNFSSPHPDYAISLIQSMLMAKTDFKIDSSLGVVIESKSGDESI
                     FQFAKVHDYIDSGYVAAQHTMSKIISKIESKSKVISTTEKRNKFNARKPKRTIGNVGV
                     TGTTQDQKIYFSKLIGDSGSYKNTIKFGRFYRRLLSNENVTDIYPEMEFDSTKENFNL
                     NLIIRKSEPFNLGIGGYISSSGVNEGFLELGYKHLGRTAQKYSVGAYFGTFYNSFSLK
                     GRIEFPGTLPLYVKLDLLISRKNYFSNARYFYEDQFPAYIISDENYGEISFGVPIGNS
                     GVINAGLSNVNAYYQYYQDNYFTRTDTADVSNFYFLVPFMEYEINSLNRKMYPTTGQH
                     LYLGFGYYSGNEKYREGSGKSPSTEFTTYLNYYTLSFKYLKYFKLFHKFSFGFSSELG
                     LSSKPLLNSYISSLLLATPYEPIPVMKTLFLENYRSNNYGGVGGTLVYNFYKQFDFRL
                     SGYYYVPYNKLLKATNNKPYLSAPFTYHYLLGSVRLVYRPPIGVISASVNYMEKPGSK
                     VGFLLNLGFLIFNKSRLNR"
BASE COUNT         1014 a          484 c          554 g         1067 t
ORIGIN      
        1 caaagtactt ttcgaagagt cccgacctcg tttcatgaac agacccatga tgtggattgg
       61 gttatacatc ctgatttgaa aacacatccg caatatgagt tagctttaac tcaaatggat
      121 ggccctggag ctatgatctc gtttggacta aaaggtggac ttactgctgg taaaaaagtg
      181 atgaataacg taaggttagc tcttcttgct gtttccctgg gcggaataga aacactaatt
      241 caacatcctg cgtctatgac tcattcaaaa ctatctaaag cagctcgcga aagcggaggt
      301 atatcagatg gtttagtgcg attgtctgtt ggaattgaag atattgacga tattattgct
      361 gatcttgaaa atgctttatc aaaagcatag ttaaaaatta gcttcacttt aaataaagtc
      421 cgctatttct ataataggct ttttatttgc tcaacatttt tattaaattc gtgttttggt
      481 tttcatactg ttttaggtta atgacttatt ggtagatgat gttcaggaag atattattat
      541 taatattatt tgtgttacca ttttcattgg cttcacagca agttgccctg gtgttaagtg
      601 gtggtggcgc aaaagcttat tcccatatag gagttcttaa agctctggaa gagaacaaca
      661 tcccaattga ttatattgtc ggtaattcga tgggggcatt aattggtgct ttatattcag
      721 cgggttacac acctgaagaa attgaactat ttttaactga cccaaatttt ttaaatcttt
      781 caaaaaatag cagttatggt aataggagtt tgtttcaaaa aatagagcca gacgctgctt
      841 tagtaaattt tccttttaac attgataagg gattaaaaat tcaacttcca ataagtgttt
      901 ataattttaa agaaatagat tatgccttaa tggagtattt ctcaggagca tctgctgtat
      961 ctggtaataa ttttgacagt ctcatgattc catttcgttg cgtagctgca gatattgatt
     1021 ccagtcgact tgtatcattc gaaaacggga acctggcaaa tgctgtccgt gcgtctatca
     1081 cttttccttt ttttgtgaga ccaattgaaa tcgacagcat attatttttt gacggaggaa
     1141 tgtataataa ttttccagtg aatattgcta ttaatgaatt ccatccggat tttattatag
     1201 gaagcaaggc tgttaacaat ttttcttctc cacatcctga ttatgctata tctttaatac
     1261 aaagcatgtt aatggcaaaa acagatttta aaattgattc gtcactcggt gttgtaattg
     1321 aaagtaaatc cggtgatgaa tcgatatttc aatttgcaaa ggtccatgat tatattgata
     1381 gtggttatgt tgctgcccaa catacaatga gtaagataat tagtaaaata gagtcaaaaa
     1441 gtaaagttat atcaacaaca gaaaaaagaa ataaatttaa tgcccgtaag ccaaaaagaa
     1501 ctattggtaa tgtcggtgta actggtacaa cccaagatca gaaaatttat tttagtaaat
     1561 taatcggtga ctcaggtagt tataaaaata ctataaagtt tggtagattt tatcgcagac
     1621 ttctttcaaa tgaaaatgtt acggatatat atcctgaaat ggagtttgat tctacgaagg
     1681 aaaattttaa tttgaattta attattagga aatctgaacc atttaatctg ggaattggag
     1741 gttatatttc ttcttcaggg gttaatgagg gtttccttga actaggctat aaacatcttg
     1801 gtagaacggc ccaaaagtat agtgtagggg cctattttgg aacattctac aatagttttt
     1861 cattaaaggg tagaattgaa tttcctggaa ccttgccttt atatgtcaaa ttagatttat
     1921 tgatatctag aaagaattat tttagtaatg ctcgctattt ctatgaagat caatttcctg
     1981 cttatattat tagcgatgaa aactatgggg aaatctcttt tggtgttccg attggaaatt
     2041 ctggggtaat taatgcaggt ctaagtaatg ttaatgcata ttatcaatat tatcaggaca
     2101 attatttcac cagaactgat accgcggatg tttcaaactt ttattttctt gttcctttca
     2161 tggaatacga aattaatagt ttaaaccgaa aaatgtatcc aacaaccggt caacatttat
     2221 atctaggttt tggctattat tcaggtaatg agaaatatag agagggctca ggaaaatcac
     2281 cttcaaccga atttacaact tatctcaatt attatacttt atcatttaag tatcttaagt
     2341 attttaaatt attccataag ttttcatttg gcttttcatc tgagctaggt ctttcatcca
     2401 aaccattgtt aaatagctat atctcaagtt tgttactggc aacaccttac gagcctattc
     2461 cagttatgaa aactctcttc ctcgaaaatt acagatccaa taattacgga ggagttggtg
     2521 gtaccttggt ttataatttt tataaacaat ttgatttcag acttagtgga tattattatg
     2581 ttccttataa taaactactt aaagcaacaa acaataaacc ttatttgagt gcacctttta
     2641 cgtaccatta cttacttgga tctgtacggt tggtgtacag gcctccaatt ggagttataa
     2701 gtgcatcggt aaactatatg gaaaaacccg gtagtaaggt tggttttcta ttaaacctcg
     2761 gcttcctaat ttttaataaa tcaagattaa acagataatg caagtgttat taaattgaaa
     2821 attgccaaat attacttcta tcattttgag gattttgaac taaaaaaatt aacttatgtt
     2881 gttttattgc taaatttgtt ggcttaattg cctgactagg cagaatatct tgtaaatcta
     2941 tgaaccgtag tttgttaaag aacctatcgg atgtaatgaa aatatcatat aatggaacgc
     3001 aaagcccaac ccaatccaac tcctgaacaa aacagcaaat cagcaatcca ggacgagaaa
     3061 cccataaacg ttgaagcaac gacaaaaagt ggaacaactc tcagtaaatc agagtcagt
//
LOCUS       DASCQP010000328         2105 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001198035, whole genome shotgun sequence.
ACCESSION   DASCQP010000328 DASCQP010000000
VERSION     DASCQP010000328.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2105)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2105)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2105
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001198035"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(302..1270)
                     /locus_tag="QF480_05620"
     CDS             complement(302..1270)
                     /locus_tag="QF480_05620"
                     /inference="COORDINATES: protein motif:HMM:NF013200.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HJN06074.1"
                     /translation="MSILVYTENWDGKFKKLSYELVSFAAAIAKELESSVTAISIGNV
                     SEEELKSLGNYGANKVLNLVDDKYNSLDNKALSSAIGSASIEECSKVVLFANNNLGKA
                     VAPRVSVKLNAGFVSGVTALPVNYDPFVVKKKVFTGKATANVKFNTDVKVITFSQNSY
                     EVVETGNNVIIEAFNPAVGEGDFTTVVKDTNKVTGQVLLSDAEIVVAGGRGMKSGDNW
                     SGLEELATLLGAGLACSRPVSDEGWRSHSEHVGQTGKIIAPNLYFAFGISGAIQHLGG
                     VSSSKVIVAVNKDADAPIFEASDYGIVGDVNIVIPKLIEGLQELKT"
     gene            complement(1295..2032)
                     /locus_tag="QF480_05625"
     CDS             complement(1295..2032)
                     /locus_tag="QF480_05625"
                     /inference="COORDINATES: protein motif:HMM:NF013200.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HJN06075.1"
                     /translation="MNILVLISNVPDTTTKIRFVGDNTAFDDIGIQWIINPWDELALT
                     RAMELKEAGEIEKITVANVGTKATEPTLRKALAVGADEAIRINAEANDAYFVAKQLAE
                     VASDYDIILAGIEASDYNGSAVGGMLAEILDFNSVSAVSGLNIEDGELIVNREIDGGV
                     QILTIGAPVVCIVQKGIAKEPRIPAMRGIMMARKKPLNVVDPVTVEDRTSFESFELPP
                     PKAACIMVEEDNAQDLITLLHEEAKVI"
BASE COUNT          655 a          443 c          301 g          706 t
ORIGIN      
        1 tgatattaag cataatcagc agtttgtgaa ttgtatcctc attaatagga ttttttaaat
       61 attcaacaac ttcaatatca tctgtccttt cttttaagta ttgcaatccg gaccgtgatt
      121 ttttacatct tgcgttatga tagatcttaa tcataatggt aattatttag agtgtcaaat
      181 ttactcaatt ttaacactga tgaaaagaat aactaaattt ataacctctt taaattaaaa
      241 aaacctgact gcaatggcac ccaggtttta tataacagtt tattcttcgt ttttcaatta
      301 attatgtttt caactcttgt aaaccttcaa ttaattttgg aataacaata tttacatcac
      361 ctacaattcc ataatcagat gcttcaaaaa ttggcgcatc cgcatctttg ttcacagcaa
      421 caattacttt tgacgaacta acgccgccca agtgctgtat tgctcctgaa ataccaaaag
      481 cgaaatataa attcggggca attatttttc ctgtttgtcc aacatgctca ctatgtgatc
      541 tccatccttc atctgaaacg ggcctcgaac atgccaagcc tgcaccgagt aatgtggcaa
      601 gttcttccaa accactccaa ttatctccac ttttcattcc acgacctcca gctacaacta
      661 tctcagcatc agaaagaaga acctgtcctg tgactttatt agtatcctta acaactgttg
      721 taaaatcacc ttcgccaaca gctggattaa atgcttcaat tatcacgtta ttgccagttt
      781 ctacaacttc gtaagagttt tgtgaaaaag taattacttt aacatcagtg ttaaatttaa
      841 catttgcggt tgctttgccc gtaaatactt tctttttaac aacaaacgga tcgtaattta
      901 ctggtaaagc agtaacacct gaaacaaacc ctgcgtttaa tttaacagat actctcggtg
      961 caacagcctt accaagattg ttattagcga aaagcactac cttggaacat tcttcaatgg
     1021 aggcagatcc tattgcagat gaaagagcct tattatcaag cgagttatac ttgtcatcaa
     1081 ccaggtttaa tactttattt gcaccgtagt taccaagaga tttcaattcc tcttcagata
     1141 cattaccgat agaaattgct gtaacagatg attccaattc tttggcaatt gcagcagcaa
     1201 aagaaactaa ttcataactt aatttcttaa acttgccgtc ccaattttct gtataaacta
     1261 atattgacat ttctttttgt tttaagttga ttagttaaat gactttcgcc tcttcatgca
     1321 ataatgtgat taaatcttgt gcattatctt cttcgaccat tatacaggca gcctttggag
     1381 gaggtagttc aaaactctcg aatgacgttc tatcttcgac agttacagga tcaacaacgt
     1441 ttaaaggttt cttacgtgcc atcataatac ctcgcatagc cggaattctt ggttccttag
     1501 ctataccttt ttgtactata caaacaacag gagctccaat agtaaggatt tgtacaccac
     1561 catcaatttc tctattaaca atcagctcac catcttctat atttagtccg gaaacagcag
     1621 atacagaatt aaagtcaagt atttccgcta acatcccacc aacagcagaa ccattgtagt
     1681 cagaagcctc aatacccgct aaaattatat catagtcaga agcaacttca gctaactgtt
     1741 ttgcaacgaa ataagcatca tttgcttctg cattaattct tattgcctca tcagctccaa
     1801 cagctaatgc ttttcttaaa gttggttcag tagctttggt tcctacgtta gccactgtaa
     1861 ttttttcaat ctcaccagcc tctttaagct ccattgctct ggttagtgca agttcatccc
     1921 aagggtttat gatccattga atccctatat catcaaaagc tgtattatca ccaacaaatc
     1981 gtattttggt tgtcgtgtcg gggacattgc ttattaaaac aagtatattc atttgctaaa
     2041 tttttataac gtaattatta tatattagat gtcaatcttc agaagaagta aaacaacaaa
     2101 tttcg
//
LOCUS       DASCQP010000329         9343 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001198319, whole genome shotgun sequence.
ACCESSION   DASCQP010000329 DASCQP010000000
VERSION     DASCQP010000329.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 9343)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9343)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9343
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001198319"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(112..771)
                     /locus_tag="QF480_05630"
     CDS             complement(112..771)
                     /locus_tag="QF480_05630"
                     /inference="COORDINATES: protein motif:HMM:NF003995.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-sensing transcriptional repressor Rex"
                     /protein_id="HJN06076.1"
                     /translation="MKHLPHKTIGRLSQYRRALLLCLADEKTHIFSHEIAKIQHITAA
                     QVRRDIMLIGYTGTIRMGYNIQELIDLIGSIIDSEEVINVCAVGMGRLGKSIVNYFNG
                     KRTRLSMSACFDNDRLKIGTDFKGIEIYDVKDLKKIVKEKNIKIGIITVTAVNAVEVC
                     EQLVKAKVKGILNYAPKRVNVPKSIFLEEIDMITSLEKVAFYVKTHDDEQFPVFAKWV
                     T"
     gene            complement(978..1793)
                     /gene="hypB"
                     /locus_tag="QF480_05635"
     CDS             complement(978..1793)
                     /gene="hypB"
                     /locus_tag="QF480_05635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005855029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016530 - metallochaperone activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase nickel incorporation protein HypB"
                     /protein_id="HJN06077.1"
                     /translation="MCGTCGCAESDEVKIMRPHNKETIEYSNDNLTYDYIHTHDEKHA
                     HDYHHHHSHSKEIILEQDILKKNNLLAERNRGYFDAKNIISINLVSSPGSGKTTLLEK
                     TISGLKDELPVFVIEGDQQTMNDAERIKNTGAPVVQINTGSGCHLDSSMVNLAVKKLE
                     PKENSILFIENVGNLVCPSMFDLGENFRIVVISVTEGDDKPAKYPNMFESSDLCIINK
                     TDLLPYVDFNVKKAKKYAMQTNQNIEFIELSAKTEDGLKDWINWLKSKFKVEK"
     gene            complement(1816..2175)
                     /locus_tag="QF480_05640"
     CDS             complement(1816..2175)
                     /locus_tag="QF480_05640"
                     /inference="COORDINATES: protein motif:HMM:NF013334.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation nickel metallochaperone
                     HypA"
                     /protein_id="HJN06078.1"
                     /translation="MHEFSIALNVVQSAEEEAIKVDGVITEVVLEIGKLSGVVKEALE
                     FALDEAKKRTRLSGAIIKYIEIPGSAKCNNCGNTYDTDDHFSICPECNHPYCSFIRGK
                     EMRIKSIKVETENSIKV"
     gene            complement(2289..3101)
                     /locus_tag="QF480_05645"
     CDS             complement(2289..3101)
                     /locus_tag="QF480_05645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012064370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenite methyltransferase"
                     /protein_id="HJN06079.1"
                     /translation="MENNTNKIRDAVRENYSKIAEANSTYTGCGCGPEVDTECCPPST
                     STSFDKISSKLGYSFEELKNVPEGSNMGLGCGNPQAIAALKDGETVIDLGSGAGFDVF
                     LAANQVGQNGRVIGIDMTPTMISKARKNAIKGKYNNVEFRLGEIENIPVQDNIADVII
                     SNCVINLSPEKQKVFNDSFRVLKSGGRLAISDVIATAELPEEIKNDIALYAGCVSGAS
                     NLNEVEQMLKKAGFINIEIKPKDESSEFIREWSPGTSIHKYIISASIEAIKP"
     gene            complement(3188..3778)
                     /gene="sigZ"
                     /locus_tag="QF480_05650"
     CDS             complement(3188..3778)
                     /gene="sigZ"
                     /locus_tag="QF480_05650"
                     /inference="COORDINATES: protein motif:HMM:TIGR02959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor SigZ"
                     /protein_id="HJN06080.1"
                     /translation="MKNRTEKLWLRYGNKLKAFIISKVHNEAIADDILQDVFIKVHAK
                     IDQINNDTKIQSWVYQITRNLIVDHFRSIKREDQKSQYIFDDPEDNFSDNMMSEAMQD
                     MVLMMEELSPEFCEAICLIEFEGMSQKEYAKKIGISYSGAKSRIQRARKMLKDMLMNC
                     CHYQFDKYGTVLSISPKSCCCCNDEQLNLNETVLAK"
     gene            complement(3892..5190)
                     /locus_tag="QF480_05655"
     CDS             complement(3892..5190)
                     /locus_tag="QF480_05655"
                     /inference="COORDINATES: protein motif:HMM:NF012437.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HJN06081.1"
                     /translation="MRQDREKKSPMASQDKTGIASSLGSIADVYNLKKDYKKALKYNQ
                     QALDMCREIDNMNNIVYNLLEIGKIHFSMSNFDKAAPFLEEAQSMIKNINSLQLKSGV
                     YQYLYEYNLAKKAFKKALNFYIRYIEINDSIYTEDSNDQIAQMRTLYETEKKEAEITQ
                     LNNEKIIQDLKLKKSNNLKWSFIVASILTLLLAAFVYYGLRQKQKTNLLLVERNKFEI
                     ENKKRAISLFGQQVSKEVAHELLSDSFKSDSKKLFACIMFLDIRGFTPFVENKEPSEI
                     IQYQNDVFGFMIDIISKNHGIVNQFLGDGFMATFGAPASSGNDSQNAVIASLNIVKTL
                     HEKYMSGELPKTKIGIGLHSGNIVSGNVGTTIRKQYSITGNTVILASRIEQLNKKYNS
                     NILISKEVLDCLDMKQLKTENLGNVVMKGRVEPIQIIKLI"
     gene            complement(5144..5713)
                     /locus_tag="QF480_05660"
     CDS             complement(5144..5713)
                     /locus_tag="QF480_05660"
                     /inference="COORDINATES: protein motif:HMM:NF024816.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HJN06082.1"
                     /translation="MEKRSALKKTLFFICIMLFLQQTAWPQLISDSLYKVLKSATGEN
                     RVDVLNQISKIYEYRNPDSSLYYATGAETLASELDYKTGKALAIKNKGNYYVRTGNYT
                     KAILEYDLAIDLYRSENDKEGLQTVINNKGNAYRVSGDYDQALYNFLESLKICEEEGF
                     RQGIAYASLNIGIIYATRQGEKESNGQPG"
     gene            complement(5858..6391)
                     /locus_tag="QF480_05665"
     CDS             complement(5858..6391)
                     /locus_tag="QF480_05665"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008862437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HJN06083.1"
                     /translation="MQNLIKTEYYSSPIGELILGSFNDKLCLCDWRYRKMRSSIDSRL
                     KTGMNAIFIEERSNIVTETITQLKNYFKGKKPKFDIPLLLVGTDFQKDVWNALLEIPY
                     GKTNTYIGLAKELNNENAIRAVATANGANAISIIIPCHRIIGNNGGLVGYAGGLEAKM
                     KLLKLENALVGNQLSLF"
     gene            complement(6480..7604)
                     /locus_tag="QF480_05670"
     CDS             complement(6480..7604)
                     /locus_tag="QF480_05670"
                     /inference="COORDINATES: protein motif:HMM:NF020123.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HJN06084.1"
                     /translation="MRKLFYLILIVSIVIGISTSCEKHIKHNFTISLDIAKGDSSIIY
                     LSKREGGEMVNYDSAQLIKGIGTITGTIEMPEFYYLKVKDTRTYFRLFVEAGDIVVQA
                     DMDDPKNPVISGSLSHDSFEAYNDSLKELNEQTSLLSKQYGVAHKNNDTVRMAEIEEE
                     YNLIEGEKTDYLIKYAVNNNDNVVSAFLALSNSYKLDLEDLDIIVGSFNPSIDSSSYV
                     KKLKNHLATLKRTAVGQPFVDFALDSPEGIPIPLSSITNSNYVLVDFWASWCGPCRAE
                     NPNIVLAYNKFHDKGFDIVGVSFDKDHDKWVEAIKEDSLNWTHVSDLKYWSCAAAELY
                     AIKSIPQNILIDPDGIIIEKNLRGQELQDKLAELLGPVEN"
     gene            7760..8185
                     /locus_tag="QF480_05675"
     CDS             7760..8185
                     /locus_tag="QF480_05675"
                     /EC_number="1.20.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011107123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030612 - arsenate reductase (thioredoxin)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase ArsC"
                     /protein_id="HJN06085.1"
                     /translation="MKILILCTGNSCRSQMADGFLKSFNQGLNVFSAGTVPGVSVHPL
                     AISVMKDINIDISTNFPKSVKDFLSEDFDYVITVCGGAKESCPVFGGKVKNTIHFGFD
                     DPAEASGTDEEIMNEFIRIRNEIEHDFTIFYNELLKPLI"
     gene            8185..9222
                     /gene="arsB"
                     /locus_tag="QF480_05680"
     CDS             8185..9222
                     /gene="arsB"
                     /locus_tag="QF480_05680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012025037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008490 - arsenite secondary active
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ACR3 family arsenite efflux transporter"
                     /protein_id="HJN06086.1"
                     /translation="MPSQIKKLSFLDRYLTLWIFTAMFIGVGSGYVFPTIAAYWNSFN
                     KGTTNIPIAIGLIVMMFPPLAKVKYEELKDVFRNRKVLLLSMVQNWIIGPVLMFALAI
                     IFLHDYPQYMTGLILIGLARCIAMVIVWNDLAKGDTEYAAGLVAFNSIFQILFFSIYA
                     YFFITILPEKIGLRGSEIDITIGQIAESVLIYLGIPFLAGIITRYSLIKIKSKGWYQR
                     SFIPKISPLTLVALLFTIYVMFSLKGEYIVQLPLDVVRIAIPLIIYFVVMFFVSFYIS
                     RKMGTDYKKTATLSFTAASNNFELAIAVAITVFGINSGEAFAAVIGPLVEVPVLIALV
                     NVSLKMKAKYF"
BASE COUNT         2674 a         1708 c         1546 g         3415 t
ORIGIN      
        1 ttatggagtt aaaacaacat tacccatttc taataaaaca gttgaaatag taatggctaa
       61 caccatagaa caaaaagagt tacttgctgt ttttaatatc gaattttagc tttaggtgac
      121 ccatttggcg aaaacaggaa actgttcatc atcatgagtc ttgacataga aagccacttt
      181 ttcgagagaa gtaatcatat caatttcttc taagaaaata ctttttggta cattaactcg
      241 ctttggagca tagttaagta tacctttaac ttttgcctta acaagctgtt cgcatacttc
      301 aactgcattt actgctgtca cagtgattat cccaatctta atgttctttt ctttaacaat
      361 ctttttaagg tcttttacat cgtaaatttc aattccttta aaatcagtgc ctatttttaa
      421 cctatcatta tcgaaacaag cagacatgga gagtctagtt cttttaccgt taaagtagtt
      481 aactattgat tttccaagtc ttcccatgcc aacagcacac acattaatta cctcttcgct
      541 gtcaataatg cttccgatca aatcaatcag ttcttgaata ttataaccca tgcgaattgt
      601 tccggtataa ccaataagca ttatatcccg ccttacctga gctgcagtta tatgttgaat
      661 ttttgctatt tcatgtgaga agatatgagt tttctcatcg gccaaacata gtaaaagagc
      721 ccttctgtat tggcttagcc tgccaattgt tttatggggt aagtgtttca tagcacagtt
      781 agatgttact agtttcaata gttattatac aaaaatacaa tgttgtacca gtaatgcaag
      841 aaaaatgtta attaattaac agtactgaat attaacatga ttggattttt gatctttttc
      901 caaagaagga ttctgttttt tagccaactt tggcattaaa gattttaagc ttatggggag
      961 ggtgtatttg tgtttgctta tttctctact ttgaatttgc tttttagcca gtttatccaa
     1021 tctttgagcc catcctcggt tttggcagaa agctcaataa attcaatgtt ttggttagtc
     1081 tgcatggcat attttttcgc tttcttcacg ttaaaatcaa catagggtaa caaatctgtc
     1141 ttattgataa tacacaggtc tgatgattca aacatatttg gatatttagc cggtttgtca
     1201 tctccttcgg ttacgcttat aactacgatc cggaagtttt ctccgaggtc aaacatgctg
     1261 ggacaaacca ggttgccaac attttcaata aataatatag aattttcttt gggctctaat
     1321 ttcttaactg ctaaattcac catagaagaa tcaaggtgac accctgatcc tgtatttatc
     1381 tgaacgacag gtgcccctgt atttttaatt ctttcagcat cattcattgt ttgctgatca
     1441 ccttcaatta cgaatacagg aagttcatcc tttaaaccag agatggtttt ttcaagaagt
     1501 gttgttttgc cagatccggg tgagctaact aagtttatgc taattatatt cttggcatca
     1561 aaataacccc tgttgcgttc tgctaataag ttattctttt ttaatatatc ctgttcaaga
     1621 ataatttctt ttgagtgaga atgatggtgg tggtaatcat gtgcatgttt ttcatcatga
     1681 gtatgaatat aatcatacgt taggttatcg ttagaatatt ctattgtttc tttattatga
     1741 ggcctcataa tctttacctc atcactttct gcgcatccac aagtaccaca catactttat
     1801 ctcctttctt aataattata cctttattga attttcagtt tcaactttga tagattttat
     1861 tcgcatttct tttccccgaa taaaactaca atacggatga ttgcattcgg gacaaatgga
     1921 aaaatgatca tctgtgtcat acgtgttccc acagttatta cattttgcag atcctggtat
     1981 ttcgatatat ttaattattg cgcctgaaag ccttgttcgt ttttttgctt cgtctagtgc
     2041 aaattccaac gcttccttta cgaccccaga taatttccca atttcaagta ctacttcagt
     2101 aatgactccg tcaaccttaa tcgcctcctc ttcagcgctt tgaaccacgt ttaatgcaat
     2161 tgaaaattca tgcataacac ttcatgttgt tagttgcaaa gatatgtatt gttaattaat
     2221 taacaataca ttagaataaa aaaaaccgct aacatagcca gcgattcttt attcactgcc
     2281 attttattct aaggtttaat tgcctctata gaagcagaaa ttatatattt atgaatgctg
     2341 gttcctgggg accattctcg aataaactca ctgctttcat ctttgggttt aatttcaata
     2401 ttaataaatc ctgccttttt cagcatttgt tcaacttcat taaggtttga tgcgcctgat
     2461 acacatcctg catataaggc tatgtcgttt ttgatttctt ctggtagttc tgcggtagca
     2521 attacgtctg aaatagccag tcttccacca ctttttagta ctctaaaaga atcattaaac
     2581 actttttgtt tttctggtga aaggttgata acgcaatttg agataattac atcagcaatg
     2641 ttatcctgaa caggaatgtt ttcaatttcc ccaagtctga attcaacatt attgtatttt
     2701 cccttaattg catttttacg tgctttcgaa atcattgttg gggtcatatc tattccaatt
     2761 actcttccat tctgaccaac ctggtttgca gcaagaaata catcaaatcc tgccccgctt
     2821 ccaaggtcaa taactgtttc accatctttt agtgcagcta ttgcctgagg gtttccacaa
     2881 ccaagcccca tatttgagcc ttcaggaaca ttttttaatt cttcaaacga atatccgagt
     2941 tttgaggata ttttgtcaaa tgatgttgat gttgagggag ggcagcattc ggtatcaacc
     3001 tcaggcccac atccacaacc agtataagta gaattcgctt ctgcgatttt gctgtaattt
     3061 tctcttaccg cgtctctgat tttattggtg ttattttcca tttttatagt tattagttgt
     3121 ttttaaatct tttatcacta tatagacgtg aaatgacaaa aaagatgcag attaaataaa
     3181 attgagctta cttggctagg acggtttcat tcaaattaag ctgctcatca ttacaacaac
     3241 aacagctttt ggggctgata ctcagaaccg taccatactt gtcaaactgg taatggcaac
     3301 aattcatgag catgtccttt aacatttttc tggctctttg tattcgtgat ttagctccgg
     3361 aatatgaaat gccaattttt tttgcatact ctttttggct cattccttca aattctatta
     3421 aacagattgc ttcgcaaaat tcgggagata attcttccat cattaagacc atatcttgca
     3481 ttgcttctga catcatgtta tctgaaaaat tatcttcagg gtcatcgaat atatattgcg
     3541 atttttggtc ttcccttttt atgcttctaa aatgatccac aattaaattc cgggttattt
     3601 gataaaccca tgattgaatt tttgtatcat tattaatctg atctattttt gcatgtactt
     3661 taataaatac gtcctgtagt atatcgtctg cgatagcttc attatgaacc ttgctaataa
     3721 taaatgcttt tagcttattc ccatatcgta accaaagttt ttcggttcta tttttcatta
     3781 atgtaatata ataattcctt taactaaatt cttccttttg taacacaaac aagatcctgt
     3841 ctataatatt gcctgagttt tttcccaacc cgaatcatca caaatataat ttcaaattag
     3901 cttaatgatt tgaattggtt cgacgcgtcc tttcattaca acatttccaa gattttctgt
     3961 ttttaattgt ttcatatcca ggcaatcaag cacttccttt gagataagta tattagaatt
     4021 atacttttta tttaactgtt ctattcgtga ggctagaatc acagtattac ctgtgattga
     4081 atattgttta cgaatagtag taccaacgtt tccgcttaca atattgccag agtgaagccc
     4141 tatgcctatc ttggttttgg gtagttctcc tgacatatat ttttcatgta atgtcttcac
     4201 aatatttaat gaggcgatta ctgcattttg gctatcattt ccagaagagg ctggggcccc
     4261 aaaggtggcc ataaaaccgt ctcccaaaaa ctggttgaca attccatgat tcttgctaat
     4321 aatgtctatc ataaatccaa acacatcatt ttgatattgt attatttcgg agggttcttt
     4381 attttcaaca aagggtgtaa agccccttat atctaaaaac attatgcagg caaataactt
     4441 tttgctatcg gatttgaatg aatctgataa tagttcatgc gccacctctt tggaaacctg
     4501 ctgaccgaac aggctaatgg ctcttttttt attttctatt tcaaatttat tacgttcaac
     4561 aagcagtaag ttggtctttt gcttttgtct taatccataa taaacaaaag ccgcaagtaa
     4621 taaggtaaga atcgatgcta caataaatga ccactttaag ttattcgatt ttttcaattt
     4681 cagatcctgg atgattttct cgttatttag ctgtgttatt tctgcttctt ttttctccgt
     4741 ttcgtacaat gttctcattt gagcaatttg atcattgcta tcttcagtat aaatactgtc
     4801 attgatttct atatatctaa tgtaaaagtt tagggctttt ttaaaggctt ttttagccaa
     4861 attatattcg tataaatatt gatatacgcc gcttttaagc tgcaatgaat taatgttctt
     4921 gatcatagac tgagcctcct ccaaaaaggg ggctgcctta tcaaaatttg acatagagaa
     4981 atgtatttta cctatttcca ataaattata tactatgtta ttcatgttat caatctcccg
     5041 acacatatca agcgcttgtt gattatactt caatgctttt ttatagtcct tttttaaatt
     5101 atatacgtcg gcgatacttc caagagatga ggctatgccg gttttatcct ggctggccat
     5161 tggactcttt ttctccctgt cttgtcgcat aaataatgcc aatattcaga gatgcatagg
     5221 ctattccttg ccggaagcct tcctcctcac atattttaag agattccaga aaattgtaca
     5281 atgcctgatc gtaatcgccg ctgacccgat aggcgttccc tttattgtta attactgttt
     5341 ggagcccttc tttatcattt tctgatctgt acaagtcaat ggctaaatca tattctagaa
     5401 tagctttggt gtaattgcct gtccttacat aatagttgcc cttgtttttt attgccaacg
     5461 cctttcctgt tttgtaatca agctcagagg caagagtttc tgctcctgtt gcataataca
     5521 atgaactatc aggatttctg tattcgtaaa ttttagaaat ctggtttagt acatctaccc
     5581 tgttttctcc tgttgcactt tttaatactt tgtaaaggct atcgctaatc agctggggcc
     5641 atgcagtctg ttgtaagaaa agcataatac agatgaaaaa tagggttttt ttgagggcac
     5701 ttcttttttc cacttgtcgc atatttgtgt ggctaaccag taaaataatt gaaagacaaa
     5761 ttatatctgt aaagatatac aagttttctc aaaatgagat ttggttaagg gggtgaagtt
     5821 gtcgtattgg tgcgattatt agttccctgg ctctgttcta aaataaacta agctggtttc
     5881 caaccagtgc gttttctaat ttaagcaatt tcatttttgc ttccagtcct cctgcatacc
     5941 ccactaagcc tccgttgttg cctataattc tatgacaggg aataattatt gaaatggcat
     6001 ttgcgccatt tgctgtcgca acggcacgaa ttgcattctc gttatttaat tcttttgcta
     6061 gcccgatata agtgtttgtt tttccgtagg gaatttctag tagggcattc caaacgtctt
     6121 tttgaaaatc agttccgact aaaagaagag gaatatcaaa tttgggtttt ttgcctttaa
     6181 aataattttt aagctgtgtt attgtttctg ttacaatatt tgatcgttcc tcaataaaaa
     6241 tggcattcat tccggttttt aacctggaat caattgaact tctcattttc cggtaacgcc
     6301 agtcacacaa acacaattta tcattaaacg aacccaaaat aagttcaccg attggtgaac
     6361 tataatattc tgttttgata aggttttgca cagtttatct atttgtgtaa tggtagatca
     6421 ctacaaatat tattaaaata gttaatctta aatatgctga caaaatgatt ttgtaggcct
     6481 taattctcaa caggacctag cagctcggca agcttgtctt gaagttcttg tcctcgaaga
     6541 tttttttcta taattattcc atcagggtca ataagaatgt tttgtggaat gcttttaatc
     6601 gcataaagtt cagctgccgc acagctccaa tatttaagat ccgaaacatg tgtccagtta
     6661 aggctgtctt ccttaattgc ctctacccac ttatcatgat ctttatcaaa tgatacgccg
     6721 acgatatcaa atcctttgtc atgaaatttg ttgtacgcca atacaatatt ggggttttct
     6781 gcacgacatg gtccgcacca tgaggcccaa aaatctacta gcacataatt actattagta
     6841 atagatgaaa gaggaatggg gattccttcg gggctatcaa gagcaaagtc tacaaatggc
     6901 tgtccaactg ctgttctttt taatgtggca agatgatttt tcagcttttt aacgtatgaa
     6961 cttgaatcaa ttgatgggtt aaaactgcca acaattatgt caagatcttc gagatcaagt
     7021 ttatatgagt tactaagagc taaaaatgcc gacacaacat tgtcattatt gttaactgca
     7081 tattttatta aatagtctgt tttttcgccc tcaataaggt tgtattcttc ttcgatttcc
     7141 gccattcgga cagtatcgtt atttttgtgt gccacgccat attgtttgct taacaacgat
     7201 gtttgctcat tgagttcttt tagtgaatcg ttatatgcct caaaactatc atgagataga
     7261 gatcctgata taacaggatt tttcggatca tccatgtctg cctgaacaac aatatctccc
     7321 gcctcaacaa acaaccggaa ataagtccgg gtgtccttaa cctttaggta ataaaattca
     7381 ggcatttcaa tggttcctgt aattgtacca atacccttta taagttgggc cgagtcgtaa
     7441 tttaccattt ctccgccttc gcgtttgctt aaatatatta tactggagtc gcccttagcg
     7501 atatccaatg aaatagtaaa attatgtttt atatgttttt cacaagatgt gctgattcct
     7561 attacaatag aaacgattaa aatgagataa aataattttc gcataataca attgtttggt
     7621 ttgtgcaaag ttacgaatag cctttaaggt ttattaatta tttaacaatt ttttctttat
     7681 tcacgttaat tcacaacagg ataaataagt ttctgtgatt attgtttata tttttaccgc
     7741 tccgttttta tcaagaataa tgaaaatatt aattttatgt acaggaaata gctgccgaag
     7801 ccaaatggct gatggttttt tgaaatcttt caaccagggc ttaaacgtct tttcggccgg
     7861 tactgttcct ggtgtaagtg tacatccgtt ggccataagc gttatgaaag atattaatat
     7921 tgatattagt actaattttc cgaaatcggt taaagatttt ttgtcggaag acttcgatta
     7981 tgtaatcact gtttgtgggg gcgctaagga aagttgtcct gttttcggtg gaaaggtcaa
     8041 aaacactatt cattttggtt ttgacgatcc tgcagaagct tctggaacag atgaagaaat
     8101 catgaatgaa tttattagaa tcagaaatga aatagaacat gattttacaa tattttataa
     8161 tgagctatta aaaccattga tataatgcca tcacaaatta aaaaactttc attcttagat
     8221 cgctacttaa ctctgtggat ttttacagca atgtttatcg gtgttggttc tggatatgtt
     8281 tttcctacaa ttgcagccta ctggaatagt tttaataaag gaacaaccaa tatacctata
     8341 gcgataggcc tcattgttat gatgttccct ccattagcaa aagtaaaata tgaagaactg
     8401 aaagatgtat ttcgtaaccg gaaagttttg ctattatcga tggtccaaaa ctggataatt
     8461 ggccctgtgt tgatgtttgc gctcgcaatc atatttttac acgattatcc acagtatatg
     8521 actgggctta ttttaattgg gctggcaaga tgtattgcaa tggtaattgt gtggaatgac
     8581 ctggcaaagg gtgacaccga atatgctgcc ggacttgttg ctttcaacag tatttttcaa
     8641 atactattct tttctattta cgcctatttc tttattacta ttctcccgga gaaaattgga
     8701 ttgcgaggat cagaaataga tattactatt ggccagattg cagaaagtgt tttaatatat
     8761 cttggaatac ctttcctcgc aggtataata actcgctact cattaattaa gataaaaagt
     8821 aagggctggt atcagcgtag ttttatacca aaaataagcc cgttaacgtt ggttgctttg
     8881 ctttttacta tttatgtaat gttctcatta aagggcgagt atattgtaca gcttccgctg
     8941 gatgttgttc gtattgcgat tccgttaatt atatatttcg tagttatgtt ttttgtatcg
     9001 ttctatatca gccgaaaaat gggaacagat tacaaaaaaa cggccaccct ttcgttcacc
     9061 gccgcaagta acaattttga gcttgcaatt gctgttgcaa ttactgtttt tggaattaac
     9121 tctggggaag cctttgcggc agtaataggc cctttggttg aggtacctgt attaatagct
     9181 ctcgttaatg tttctttgaa aatgaaggct aaatattttt aactacaaat tataaatcat
     9241 ttctctttgt tcatgctttc tttccaaagc tgattaaatg attttggtgc tatttcagga
     9301 agatcacgac gtggacccca gcttttgtta attgctgtct tta
//
LOCUS       DASCQP010000330         2182 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001201542, whole genome shotgun sequence.
ACCESSION   DASCQP010000330 DASCQP010000000
VERSION     DASCQP010000330.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2182)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2182)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2182
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001201542"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(183..1181)
                     /locus_tag="QF480_05685"
     CDS             complement(183..1181)
                     /locus_tag="QF480_05685"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013380.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-dihydrouridine synthase family protein"
                     /protein_id="HJN06087.1"
                     /translation="MNPDLKIYLAPFQGITTHPYREVYTKYFGGVDKLFTPFFTGNQK
                     PNSIAKRAFEFNYPYQNKVEVVPQILSKDAVEIIRFTQFCNTKGFKEINWNLGCPYSR
                     VANKKRGSGLLPYPDLVNKILEKVMPEIDIDFSIKCRLGYFAEDEILDLIKIFNSFNI
                     SELTIHARIGKQLYAGNVRIEALKRALSKSNIDVVYNGDVFSVSDLKGFRNNLRTTNR
                     FMIGRGLLVDPFLPMKMKNGKVPELSGQKEIAYKFITDLYIAYRKKMNDRPQATGVLK
                     ELWGFMAYSFNNHQKLFNSIKKTKSFDEYEEAVASVFQDFDWVGSEAGLFRKHLQE"
     gene            complement(1223..>2182)
                     /locus_tag="QF480_05690"
     CDS             complement(1223..>2182)
                     /locus_tag="QF480_05690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009133947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid--tRNA ligase-related protein"
                     /protein_id="HJN06088.1"
                     /translation="GIDIPELPHIEYADAIKYYGSDKPDLRFGMKFIEINELAQKKGF
                     NIFDDSELVVGIVAGGCANYSRKQLDKLTDFVRKPQIGAKGLVYVKYNEDGSFKSSVD
                     KFFDQEAFNVWAQKMNAKPGDLMLVLSGEEDKTRKQLSELRLEMGNRLELRNPNVFIP
                     LWVVDFPLLEWDEESRRYHAMHHPFTSPKAEDLDLLDTKPGKVRANAYDLVINGVEIG
                     GGSIRIHDRSLQKLMFKHLGFTDEEAQEQFGFLMNAFEFGAPPHGGIALGFDRLVALF
                     GGQDSIRDFIAFPKNNSGRDIMIDTPSVIAEEQLDELGLKVAK"
BASE COUNT          677 a          425 c          347 g          733 t
ORIGIN      
        1 gtcagttgat ttattttcca tgatagtaaa tattacgatt taaaaggcaa aactattatg
       61 tttgggcact aatgtaaata aaaattcggt aattggagga attttatcgg tggttggcga
      121 ttttcgaaat aacgaagtag gatattgcag ttgtgatttc aaacattctt atgaatccca
      181 acttattcct gaagatgctt tctaaaaagc ccagcctctg atccaaccca atcaaagtct
      241 tgaaaaacac ttgcaacagc ttcttcatat tcatcaaacg atttggtctt ttttatacta
      301 ttaaatagct tttgatgatt gttaaatgaa taagccataa atccccataa ttcttttaac
      361 acaccagttg cctgtggtct gtcattcatt ttctttcggt aagcaatata aaggtcggta
      421 ataaacttat aggcaatttc tttttgccca gacaactcag gaacttttcc gtttttcatt
      481 ttcattggta aaaatggatc tactagcaat cctcttccaa tcataaatct atttgttgtt
      541 cttaaattgt ttcgaaatcc ctttaaatca gaaacggaaa atacatcgcc attgtaaact
      601 acatcaatat tgctttttga aagggctctt ttaagtgctt caattcgtac attacccgcg
      661 taaagttgtt ttccaattct agcatgaata gtaagctcgg aaatattgaa tgagttgaaa
      721 attttaatta agtctaatat ctcatcctct gcaaaatacc ctaacctgca ttttattgaa
      781 aaatcaatat caatttcggg catcactttt tccagaatct tattaaccaa atcaggatat
      841 ggcagcaacc ctgaccctct ttttttgttt gcaactctgg agtatggaca tccaagattc
      901 cagtttattt ctttaaatcc tttggtgtta cagaattgtg taaaacgtat tatttctaca
      961 gcatcttttg atagtatttg aggaacaacc tcaaccttgt tttgatatgg ataattaaac
     1021 tcaaacgctc tttttgcaat actattaggt ttttgatttc ctgtaaaaaa aggtgtaaac
     1081 agtttgtcaa caccgccaaa atattttgta taaacctcac ggtatggatg ggttgttatt
     1141 ccttgaaagg gtgcgaggta tattttgaga tccggattca ttcgaaatct taataattgg
     1201 aagcctgaat ttcagattta aattactttg ccaccttcaa tcctaattca tccaattgct
     1261 cttcagcaat tacagatggt gtatcgatca taatatcacg accagagttg ttttttggaa
     1321 aagcgataaa atcacgaata gaatcctgac ctccaaataa agctactaaa cgatcaaatc
     1381 caagtgcaat gccaccatgt ggtggcgcac cgaattcaaa tgcattcatc aaaaaaccaa
     1441 attgttcctg tgcttcttcg tcagtaaaac caagatgttt gaacatgagt ttctgcaagc
     1501 tgcgatcatg tatacgaata gaaccaccac cgatttcaac tccattgatt accaagtcgt
     1561 atgcattagc acgtacttta ccaggtttag tgtccagaag gtctaaatct tcagcttttg
     1621 gggaggtaaa aggatggtgc attgcatgat atctacgtga ttcttcgtcc cattcaagta
     1681 atggaaaatc tacaacccaa agaggaataa agacattggg gttgcgaagt tctaacctgt
     1741 tacccatttc aagacgcaat tcactaagtt gttttctggt tttatcctct tcgcctgaaa
     1801 gtacaagcat aaggtctcct ggtttcgcat tcattttttg agcccaaacg ttaaaagctt
     1861 cctgatcgaa gaatttatct acagatgatt taaaactacc atcttcattg tatttcacgt
     1921 aaacgagtcc cttagctccg atttgaggtt ttcttacaaa atcagttagc ttgtctaatt
     1981 gtttacgtga gtaatttgca catccaccag ccactatacc aacaacaagt tctgaatcat
     2041 caaatatatt gaaacccttt ttttgagcca attcatttat ctcaataaac ttcatcccaa
     2101 acctcaaatc tggcttgtca ctgccataat atttaatagc atcagcatat tcaatgtgtg
     2161 gaagttcggg aatgtcaata cc
//
LOCUS       DASCQP010000331         1723 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001206332, whole genome shotgun sequence.
ACCESSION   DASCQP010000331 DASCQP010000000
VERSION     DASCQP010000331.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1723)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1723)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1723
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001206332"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..325
                     /locus_tag="QF480_05695"
     CDS             <1..325
                     /locus_tag="QF480_05695"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HJN06089.1"
                     /translation="LKRIVVNKCINELKRKKADLQFYEDMGQFNQNTNDDEELPELSV
                     ASIKKAMEQLPQGNRIIFSLYLLEGYDHREIAQILNTSESNSKSQYMRAKRKIKEILN
                     TSQDD"
     gene            318..890
                     /locus_tag="QF480_05700"
     CDS             318..890
                     /locus_tag="QF480_05700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06090.1"
                     /translation="MTKDRLEQYILNNRDEFDSLEPSEGIWSGIVEEKQRPKQKLITI
                     NQFKWVVRIAAAVLIFVGSYYFHDFRSQQQQLSQTNASSNEGSQLYNNLLEAEYYYTA
                     QIGVETEKLYQLTVGNSTVREEIQNELKELDKEFRLLKEDLKDNADNEEIIAAMIQNY
                     RLKLSILQDMMFQLQEVKKEKENKDEIKLI"
     gene            871..>1723
                     /locus_tag="QF480_05705"
     CDS             871..>1723
                     /locus_tag="QF480_05705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06091.1"
                     /translation="MKSNLFKINPVLYMLLLFSLSVSSQSFTKENKLVRSFGLTDETE
                     TVITNKYGDITLENWDKDSIRIEISYKVTSTKESKLDKTFDAINFDFKANQYYVVAST
                     VFEGKGSFWTDVSDIASNLFTGGTNTTIDYTIYIPEDKHISLNLKYGNVYITNHVGYF
                     KLSLSNGDFKAHNLTGDTELDIEFGDATVNKIIDGSVKVRYGTFNLENANKILLVGQS
                     AEFYLGEIDELTIDSKRDKISLEYVGVLSGQTYFSRVVVDEIEDRLDLSTKYGSFKLN
                     EIGAHVKN"
BASE COUNT          661 a          228 c          328 g          506 t
ORIGIN      
        1 gctaaaaaga attgtagtta ataaatgtat taatgagtta aagcgtaaaa aagcagattt
       61 acaattttac gaagatatgg ggcagtttaa tcaaaataca aatgatgatg aagaattacc
      121 tgaattaagt gtcgcatcaa taaaaaaagc aatggaacaa ctccctcagg gaaatagaat
      181 tattttctca ctgtacctac ttgaaggtta tgaccatagg gagatagccc agattctaaa
      241 cacaagtgag agcaactcta aatcacagta tatgagggca aaaaggaaaa tcaaagaaat
      301 tttaaatact tcacaagatg actaaggaca gattagaaca atatattctg aataacagag
      361 atgagtttga ttcacttgaa ccttcagaag gtatatggag tggtattgtt gaggaaaaac
      421 aaaggcccaa acaaaagtta attacgatta atcagttcaa atgggtagtt cgtattgctg
      481 ctgctgtatt aatatttgta ggcagttact attttcatga ttttagaagt caacaacaac
      541 aattaagtca aactaacgcc tcgtcaaatg aagggagtca actttacaat aatctacttg
      601 aggctgaata ttattataca gctcaaattg gagtagaaac agaaaaacta tatcaattaa
      661 cggtaggaaa ctcaactgtg cgtgaagaga ttcaaaatga attaaaggaa ttggacaagg
      721 agtttcgctt attaaaagag gatttaaagg ataatgcaga taacgaagaa attatagccg
      781 ctatgattca aaattacaga ttgaaactca gtatacttca ggatatgatg tttcagttgc
      841 aagaggttaa aaaagaaaag gaaaataaag atgaaatcaa acttatttaa aattaatccc
      901 gtattgtaca tgctcttact gttttcatta tcggtaagta gtcagtcgtt tacaaaagag
      961 aacaaacttg ttcgctcatt tggattgact gatgaaacgg aaactgtaat caccaacaaa
     1021 tatggtgaca taacattaga aaactgggat aaagattcta ttaggattga aattagttac
     1081 aaggtaactt ctactaagga atctaaatta gacaagacat tcgatgcaat taatttcgat
     1141 tttaaggcaa atcaatatta tgttgtagca agtacagtat ttgaaggcaa aggatcattt
     1201 tggacagatg tgtctgacat tgctagtaat ctgtttacag gaggcactaa cactactatt
     1261 gattatacca tttatattcc agaagataag catattagcc tgaatcttaa atatggaaat
     1321 gtttatatta ctaatcacgt aggttacttt aagctatcat tgtctaatgg agattttaaa
     1381 gcacataatt taactggtga tactgaattg gatattgagt ttggcgatgc tacagtaaac
     1441 aaaataattg atgggtcagt aaaggtacga tatggtacat tcaacctcga aaatgccaat
     1501 aagattttat tagttgggca atctgcagaa ttctatctag gtgagattga tgagttgaca
     1561 attgattcaa aacgtgataa aatatcatta gaatatgtag gtgtgctttc cgggcaaact
     1621 tattttagcc gagtagtagt agatgaaatt gaagataggc tagatctatc aacaaagtat
     1681 ggtagtttta aacttaatga aatcggagca catgttaaaa acg
//
LOCUS       DASCQP010000332         3001 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001208984, whole genome shotgun sequence.
ACCESSION   DASCQP010000332 DASCQP010000000
VERSION     DASCQP010000332.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3001)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3001)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3001
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001208984"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..678
                     /locus_tag="QF480_05710"
     CDS             <1..678
                     /locus_tag="QF480_05710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018337650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ C-terminal domain-containing protein"
                     /protein_id="HJN06092.1"
                     /translation="SGSEKGNKPSTCSTCHGQGQVTRITNTFLGQMQTASTCPQCGGS
                     GEMITNKCKVCHGNGITKGEEVVSINIPAGVADGMQLSVSGKGNAGARGGVPGDLIVL
                     IEEKEDAELVRDGNNLLYDLYINFADGALGITTEIPTIDGKARIKIAPGTQGGKVLRL
                     KGKGIPDVNGYGRGDLLVNVNIWTPRDLTKEEKGMMEKLRKSENFKPNPTSKDKSYFD
                     RMREFFS"
     gene            846..1760
                     /locus_tag="QF480_05715"
     CDS             846..1760
                     /locus_tag="QF480_05715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019151875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HJN06093.1"
                     /translation="MDQNIALQAINVSKSYANHKALDKVNIEVPNQSIFGLLGPNGAG
                     KTTLLRIINLISVMDEGRVLLNSKPITTKDIVNIGYLPEERGLYKKMKVGEQAVYLAQ
                     LKGMSKKDAVSQIKTWFEKFDIGSWWNKKVEELSKGMQQKVQFIVTVLHNPKLLIFDE
                     PFSGFDPINVNLLKEEILNIRANGATIIFSTHNMASVEELCDNIALINNSQTVLSGSI
                     HNIKEKYKDNIFEVAYRSEKNLLLSKNNYSVTNLKDIHDVHYSMVKINNGRTPNELLM
                     QILPQAELVSFKEILPSINDIFIKEVSG"
     gene            1860..>3001
                     /locus_tag="QF480_05720"
     CDS             1860..>3001
                     /locus_tag="QF480_05720"
                     /inference="COORDINATES: protein motif:HMM:NF024110.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJN06094.1"
                     /translation="MNKILLIIQREYLSRVKKRSFIVMTIIGPILMAAMIILPAYLAN
                     WSEATEKRIAVLDETGWFLEKFKNQDNISFYYVFEDLEHEKKNALNKKGDMLLYIPRT
                     ELNIPLNSELYSLKQPGLNVTSYLKSVMKQIVENKKLLASGIDPEIIKSAKVNINLST
                     IRVEENGIEKKSNTEVEVGLSIFSGILIYFFIFMFGVQVLKGVMEEKSNRIVEVIISS
                     VKPFQLMMGKIIGIAFVGLTQFSLWIILTLVFIGIFQTGMLTDSSSAMEMLGNKTEMI
                     QQVGTNENGINPMTMVNEIIGGINIKVMVLSFIFYFLGGYLLYSSLFAAIGGAIDHDT
                     DSQQFMLPVSIPLIFSIALSGVIINQPDSSLALWMSMIPFTSPITM"
BASE COUNT         1087 a          457 c          563 g          894 t
ORIGIN      
        1 tctggctctg aaaaaggaaa taaaccatca acctgttcaa catgtcatgg acaaggtcag
       61 gttacaagaa ttacaaatac atttttaggt caaatgcaaa cagcctctac ttgtccacag
      121 tgtggcggca gcggcgagat gattactaat aaatgtaaag tttgccatgg aaatgggatt
      181 acaaaaggag aagaagttgt aagtattaat attcccgccg gtgttgctga tgggatgcaa
      241 ttatcagtta gtggaaaagg aaacgcagga gcacgaggtg gagttccagg tgatttaata
      301 gtattgattg aagaaaaaga ggatgctgaa ctagttcgcg atggaaataa tttattgtac
      361 gacctgtata ttaacttcgc tgatggtgcc ctgggaataa caaccgaaat tcctacaata
      421 gatggtaagg ccagaataaa gatagcaccc ggtactcaag gtggaaaagt cttaaggctt
      481 aaaggaaaag gaatacctga tgtgaatggt tatggaagag gagatcttct tgtaaatgtt
      541 aatatctgga caccacgaga tcttacaaaa gaagaaaaag gaatgatgga gaagctaagg
      601 aaatctgaaa actttaagcc aaatccaacg tctaaagaca aaagctattt tgatagaatg
      661 agggagttct tttcttagca ttcttgtaat ccaactgact cctttataat tgacagatag
      721 gtaagctatc attaaaagat aatagcatat tttagagaga aatcaatctt ttaacatttt
      781 tttaaaattt gaaatttatt aagatattat ttttgccact cactcctgat ttttaaaaca
      841 gtatcatgga tcaaaatatt gcactccaag ccataaatgt ttcgaaaagt tacgctaacc
      901 ataaagcact tgacaaggta aatattgaag ttccaaacca aagtatcttt ggcctattag
      961 gaccaaatgg tgctggaaaa acaacattac tacgcatcat taatctcatc tctgtaatgg
     1021 atgaaggcag agtgttgtta aatagtaaac caatcactac aaaagacatt gtaaatattg
     1081 gctacctgcc tgaagaacgc ggactttaca aaaaaatgaa agtaggtgag caagctgttt
     1141 atctggcaca gctaaaaggg atgtcaaaaa aagatgccgt aagtcaaata aaaacctggt
     1201 tcgaaaagtt tgatattggg tcgtggtgga ataagaaagt agaagagctc tcaaaaggaa
     1261 tgcaacaaaa agtacaattt attgtcactg ttctgcataa tccaaaactg ctgatatttg
     1321 atgaaccatt tagtggattt gacccaatca atgttaacct tcttaaagaa gaaattctaa
     1381 atattcgtgc taatggagca acaattatat tttcaacaca taatatggca tctgttgaag
     1441 agctgtgcga taacatagct ttaatcaata atagccaaac agtactctca ggtagtattc
     1501 ataacataaa ggagaagtat aaagataata tctttgaagt agcataccgg tcggaaaaaa
     1561 atcttctttt gtctaaaaat aattattcag taacaaatct aaaagatata catgacgttc
     1621 attattcaat ggttaaaata aacaatggcc gtacgccaaa tgaacttcta atgcaaatat
     1681 tacctcaggc agaattagta tcctttaaag aaatattacc atctataaat gatattttta
     1741 ttaaagaggt gagtggataa tcagtgttat tgtgctatct gagttgtcaa aaacttttca
     1801 ttaacacagc cttgataata ttaatagctc aacaatgaag aaaacaacta aataaactaa
     1861 tgaacaaaat actacttatt attcagcgtg aatacctctc aagggtgaag aaaagatcgt
     1921 ttattgtcat gacaattatt gggccaatac tgatggcagc catgattatt cttcctgcat
     1981 accttgccaa ctggagcgaa gcaactgaaa aacgtattgc tgttcttgat gaaactggtt
     2041 ggtttctgga aaaatttaaa aatcaggata atatatcctt ttattatgtt tttgaagacc
     2101 tggagcacga aaaaaaaaat gctctaaaca aaaaaggtga tatgttactt tatatcccac
     2161 gtactgagct taatattcca ttaaattctg aactatattc tttaaaacag cctggtttga
     2221 atgttacttc atatctcaaa tcggtgatga aacaaattgt agagaacaaa aaacttcttg
     2281 cttcaggaat tgatcctgaa ataattaagt cggcgaaagt aaatataaac ttaagtacaa
     2341 taagagttga agaaaatggg atcgaaaaga aaagtaacac ggaggtagaa gttggccttt
     2401 caatattttc tggaatactt atttacttct ttatttttat gttcggcgtg caggtattga
     2461 aaggtgtaat ggaagaaaaa tcaaaccgga ttgttgaagt gataatttca tctgtaaaac
     2521 cattccaatt gatgatgggt aaaattatcg gaattgcatt tgtgggttta acgcaattct
     2581 cattatggat aatacttaca cttgttttta taggaatctt ccaaacaggc atgctaaccg
     2641 atagcagttc ggcaatggaa atgcttggta ataaaactga aatgattcag caagttggta
     2701 ccaatgaaaa tggaataaat ccaatgacaa tggtaaatga aattattggg ggtattaata
     2761 ttaaggttat ggtattaagc tttatatttt attttcttgg aggatattta ctatattcat
     2821 ccttatttgc agctataggc ggagcaattg accatgacac tgatagtcag caattcatgc
     2881 tgcctgtttc aatacctttg attttttcaa ttgcactttc gggtgttata ataaaccaac
     2941 ccgacagttc tctggcatta tggatgtcga tgataccttt tacatcgcca ataacaatga
     3001 t
//
LOCUS       DASCQP010000333         2451 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001211984, whole genome shotgun sequence.
ACCESSION   DASCQP010000333 DASCQP010000000
VERSION     DASCQP010000333.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2451)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2451)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2451
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001211984"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..2235
                     /gene="gyrA"
                     /locus_tag="QF480_05725"
     CDS             <1..2235
                     /gene="gyrA"
                     /locus_tag="QF480_05725"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009316987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006259 - DNA metabolic process [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HJN06095.1"
                     /translation="PLVQGQGNFGSIDGDNPAAMRYTEVRLRKIAEEMLVDIEKDTVD
                     HQLNFDDSLKEPVVLPAQFPNLLVNGASGIAVGMATNMAPHNLSQVIDGTLAYIDDNE
                     IDISELIKLVQAPDFPTGGIIYGYEGVINAFETGRGRVMMRGEISVEESSGGREQLIA
                     TSIPYQVNKAEMIRKTADLINEKKIEGISDINDESDRNGMRIVYDLKRDAIPNIVINK
                     LYQLTSLQSSFSVNNVALVKGRPKTLNLQELIKYFVEHRHEVVTRRTEYDLKEAERKA
                     HILEGLLVALDNLDAIIALIRASLTPEDARNGLISNYDLSEIQARAILDMRLQKLTGL
                     ERDKIKKDYEELQTLIGELKEILESFELRMSIVKTELIAIKEQYGDERKSQVVYTAED
                     ISMEDLIPDEKVVITISHMGYIKRTALTEYRQQKRGGRGSKGSTTRNEDFLEHLFVAT
                     NHNYMLFFTEQGKVFWMRVFEIPEGTKTSKGRAIQNLINISPDDKVKAIINTKDLKDE
                     EYINSHFIVLATKKGVIKKTSLEAYSRPRQNGINAITIREGDELLVARLTNGTNDILM
                     AVKSGKTVRFKEEKVRVMGRNASGVRGITLRSEKDEVVGMICLENTEYTILVVSEKGY
                     GKRSEVDDYRITNRGGKGVKTLNITEKTGNLIALKNVTDEDDLMIINKSGIAIRMSVK
                     DLRVMGRATQGVRLIRIDEGDEIAAVAKVDIDAGDETELLDDDDPQDSENEGNNIEES
                     DNTE"
BASE COUNT          860 a          371 c          554 g          666 t
ORIGIN      
        1 ccattggtac aaggccaggg aaactttggt tctattgacg gtgataatcc tgctgcaatg
       61 cgatatactg aggtaagact caggaagata gcagaagaga tgttggttga tatcgaaaag
      121 gatactgttg atcatcagct taacttcgat gattccctaa aagaacctgt tgttctgccg
      181 gcacaatttc caaacttgct ggttaatgga gcatcgggta ttgccgtagg tatggcaaca
      241 aatatggctc ctcataattt aagtcaggta attgacggga ctctagccta tattgacgat
      301 aacgaaattg atatctcaga attaattaag ctggtacagg ctccggattt tcctaccggc
      361 ggaataattt acggttatga aggggtaata aacgcctttg aaacgggccg tggccgtgtt
      421 atgatgcgtg gcgagataag tgttgaagaa tcatccggtg gacgtgagca gttaatcgct
      481 acttcaatcc cttatcaggt taataaagct gaaatgatcc gcaaaacagc tgatcttata
      541 aatgagaaga aaatagaagg tatctctgat attaatgatg aatcggatag aaatgggatg
      601 agaatagttt atgatcttaa aagagatgct attcccaaca ttgttatcaa taaattatac
      661 cagcttacat cgttacaaag ctcatttagt gtgaataatg ttgccttggt taaaggtcgt
      721 ccgaaaacat taaacctaca ggaattaatc aaatattttg ttgagcatcg tcatgaagta
      781 gtaacacgca ggacagagta tgatcttaag gaagctgaac gtaaggcaca tatactggaa
      841 ggtttgctcg ttgctcttga taatttggat gcaattattg cattgatcag agcttcatta
      901 actcccgaag acgccagaaa tggactaata agcaattatg acctgtctga aattcaagcc
      961 agggctattc tcgatatgag actccagaaa ttaacaggac ttgagaggga caagatcaaa
     1021 aaagattatg aagaattgca aactctgatt ggggaactaa aagaaatatt ggaaagcttt
     1081 gaactaagaa tgagcatcgt taaaacagag cttattgcta ttaaggaaca gtatggtgat
     1141 gaaagaaaat cgcaggttgt ttatactgcg gaggatataa gtatggaaga cctcattccg
     1201 gatgagaaag tggtaataac catttctcat atgggataca ttaaacgtac tgcacttact
     1261 gaataccgtc aacagaaaag gggagggcgt ggatcgaaag gaagtactac acgaaatgaa
     1321 gattttctgg agcatctatt tgttgcaacc aaccataact atatgctttt ctttaccgaa
     1381 caaggtaaag tattctggat gcgagttttt gagattccgg aaggcaccaa aacttcaaaa
     1441 ggaagagcca ttcagaacct tataaatatt agccctgatg ataaggttaa ggctataatt
     1501 aacacgaaag atcttaagga tgaggaatat ataaacagtc attttattgt actggcaaca
     1561 aaaaaaggtg ttattaagaa aacatctctt gaggcttact cgcgtccacg tcaaaatgga
     1621 ataaacgcaa ttacaatacg cgaaggtgat gagctgctgg tagcaagact aaccaatggt
     1681 actaacgaca tattaatggc cgttaaatcg ggtaaaacag ttcggtttaa agaggaaaaa
     1741 gtaagggtaa tgggccgtaa tgcttccgga gttagaggaa ttacacttcg tagtgaaaaa
     1801 gatgaagttg tcggcatgat ttgtttggaa aatactgaat atacaatcct ggttgtatca
     1861 gaaaagggat atggaaagcg ctcagaagtt gatgattatc gtataacaaa tagaggagga
     1921 aaaggtgtta aaacgctgaa tatcactgag aaaacaggca atcttatagc attaaagaat
     1981 gttacggatg aggatgatct gatgataatc aataagtcag gtattgcaat tagaatgtct
     2041 gttaaagatc tccgtgttat gggacgtgca acgcaagggg taaggctgat tagaattgac
     2101 gaaggtgatg aaattgcagc tgtcgcaaaa gttgatatcg atgctgggga cgaaactgaa
     2161 ctccttgatg atgacgatcc tcaagacagt gaaaatgaag gtaataacat cgaggaaagt
     2221 gacaatactg aataattatt taaaaataat atatatttat ggtgcaaatt tggttaataa
     2281 ttatatttgc tcctaattat taaattttat acagatgaaa tacccatgag ctaaaaatag
     2341 cacaccaacc gagaatgaat attgtgggta actttgtgac attgtctcat aaagttaaca
     2401 taaaatggaa aaagaagaaa tttcattcgt acaggttgta aaagttggct g
//
LOCUS       DASCQP010000334         1792 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001212714, whole genome shotgun sequence.
ACCESSION   DASCQP010000334 DASCQP010000000
VERSION     DASCQP010000334.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1792)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1792)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1792
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001212714"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..822)
                     /locus_tag="QF480_05730"
     CDS             complement(<1..822)
                     /locus_tag="QF480_05730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06096.1"
                     /translation="MKKKSVRKNIKKKILSILLYFLLVAAIIPFVLTFLFLNPMVQTI
                     SAKLAADIITNNLGQKVSINSINIGIFDGINVEGFKVEDQNKNTLLSVGKLSAMPVIT
                     SLSLNNFKFLSIELDSVQLNMGSYNADTTSNLALIIKKFSRGGKKSGTPFKFYSGSVK
                     ISNSSFNLFNQNKNFGYRENTMDYANMVIDSISLDISDFKLEGDSLNFKIKKLSAKEK
                     SGIVVKKMSADFILSSKGLYTNNTLINLENSDIDADFGMEYSNYLSFRYYIDSVNM"
     gene            823..>1792
                     /gene="tsaD"
                     /locus_tag="QF480_05735"
     CDS             823..>1792
                     /gene="tsaD"
                     /locus_tag="QF480_05735"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006797713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HJN06097.1"
                     /translation="MIYILGIESSCDDTSASVLKDNRVLSNIIANQSIHSSYGGVVPE
                     LASRAHQQNIIPVVDAALKEANIKKNQLNAVAFTRGPGLLGSLLVGTSFTKSFALALG
                     IPMVEVDHLRAHILAHFLDDENGSQSPSFPFLCLTVSGGHTQIVKVISPYDMVIIGNT
                     IDDAAGEAFDKAAKIMGLPYPGGPEIDKLAKIGNANAFHFPKPRIQGLDFSFSGLKTS
                     FLYFLRDRLKEDEDFIEKNKTDLAASIQATIIDILIDKLKKAVNATGINEIAIAGGVS
                     ANSGLRSQLKQTANTVGWKVYIPDLKFTTDNAAMIAIAGYFKYLEKD"
BASE COUNT          595 a          299 c          309 g          589 t
ORIGIN      
        1 catattaaca gagtcgatat agtagcgaaa tgataaatag tttgaatatt ccatgccaaa
       61 atcggcatca atatctgaat tttcgaggtt aataagtgta ttatttgtat aaaggccttt
      121 tgaacttaga ataaaatcag cactcatttt ttttaccaca atacccgatt tttcctttgc
      181 agaaagtttt tttatcttga aattaagaga atccccttct aatttaaaat cacttatatc
      241 aagactgata ctatcgataa ccatattcgc ataatccata gtattttccc gatagccaaa
      301 gtttttattt tgattgaata agttaaatga tgaattactg attttaactg agcccgaata
      361 aaacttaaaa ggtgttccag acttttttcc acctcttgaa aactttttga ttattaatgc
      421 taaattacta gtagtatcag cattgtagga ccccatattt aattgcacac tatcgagttc
      481 aatagataaa aatttaaaat tgtttagact tagacttgta attactggca tggcagaaag
      541 cttgcctaca ctcagtaatg tgtttttatt ttgatcctct accttaaatc cttcaacatt
      601 tataccatca aaaatgccta tgttaattga attaatacta actttttgac ccagattgtt
      661 agttatgata tcggcagcaa gttttgcaga aatagtttga accatgggat tcagaaacag
      721 aaatgttaat acaaaaggaa ttattgctgc cacaagtaga aaatatagca gaatagataa
      781 gatctttttt ttaatatttt tgcggacaga tttcttcttc aaatgatata tatattaggc
      841 atagaatcat cctgcgacga cacatctgca tcagtactaa aagataacag agttttgtcg
      901 aatattattg caaatcaaag tattcatagc tcttatggtg gagtagtacc tgagttagct
      961 tcaagagcac accaacaaaa tattatacct gtagttgatg ccgctcttaa agaggcaaat
     1021 ataaagaaaa atcaattgaa cgctgttgct tttacaagag gtcccggcct gcttggatcg
     1081 ttgttggttg gaacttcttt caccaaatca ttcgcattgg ctcttggtat tccaatggtt
     1141 gaagttgatc atttgagagc ccatatactt gctcattttt tagatgatga gaacggaagc
     1201 caatcgccat cttttccttt tctgtgtctt actgtttctg gtggacacac acagattgtt
     1261 aaagtaatta gcccttatga catggtcatt ataggaaaca ctattgatga tgctgccgga
     1321 gaagcatttg acaaagcggc caaaattatg gggttaccgt atcctggtgg acctgagatt
     1381 gataaactgg ccaaaattgg taatgccaat gcatttcatt ttccaaaacc cagaatacaa
     1441 ggtttagatt tcagcttcag cggactaaaa acatcatttt tatatttttt gcgagataga
     1501 ttgaaagaag atgaggactt tattgagaaa aacaagactg atctggcagc atcaattcaa
     1561 gctaccatta ttgatatact catagataaa ttaaagaaag ctgtaaatgc tactggaatt
     1621 aatgaaattg ctattgccgg tggagtatcg gctaactctg gattgaggtc acaactaaaa
     1681 caaactgcta ataccgtagg gtggaaagta tatattccag acctaaaatt tacaaccgat
     1741 aatgctgcta tgattgctat cgccgggtat tttaaatatt tagaaaagga tt
//
LOCUS       DASCQP010000335         2302 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001212862, whole genome shotgun sequence.
ACCESSION   DASCQP010000335 DASCQP010000000
VERSION     DASCQP010000335.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2302)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2302)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2302
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001212862"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            579..>2302
                     /locus_tag="QF480_05740"
     CDS             579..>2302
                     /locus_tag="QF480_05740"
                     /inference="COORDINATES: protein motif:HMM:NF015983.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HJN06098.1"
                     /translation="MADLVHNRFMGSSANDTVPYNVASISAYTKSLFNKNTQIKIFKY
                     TDDLIEAVKENPPNIIAFSHYIWNAHLNQSIGNYLKEKYPELLIVAGGPSIKTTHNEI
                     KEFLEVNKYIDLCVINEGEGAFLNCVIAYDQGAKSFMDKKQIIPNVGYLSGGSLIFEV
                     ENKFSDLDNIPSPYLLGYLDEFLEQGLMPIFETNRGCPFKCTYCAWGKAALSKVRKMS
                     LPKVLKEMEYVAEKYPQCADWIIGDANFGMLPRDIEIAHKINELRKNRPSIKSVTVYE
                     SKNTTIRSIEISSILRKSGDIKKQQDFSLIALQTLDETAQKYSKRSNIKLDDVPLKIK
                     AFRDAGTGVRTDILSGLPGESFEGHMSTLRQCFDYGFDHIGIYNVIILPGTEMETQES
                     RNNYGIKTKFRLKDNAFGQYNDIKSIEQEEVICSNNAITEAELLTLRCMHWHIWFGWN
                     HGFFKPFFKYVYKNHGLNPVDIIYKVATSANLKNNLKTSLDCFKENFEGEFFESPESL
                     REYYFNPSVWSKILNKGLSRAGFILNAKFIQDKELYKSALEALTNVVSTNKVEKDKLK
                     ILSNLLLQ"
BASE COUNT          887 a          316 c          388 g          711 t
ORIGIN      
        1 cgaaccaaaa gaaaaatcaa tatcttaata cttaataaag aaaataaata gcatccaaaa
       61 aaagacacat ttattgacta tattaataat tgttaaagct ctttaactta aaaacttcag
      121 caacacctaa attatgaaag agataatatg ataaaatgtg aatggaggga tataagtgga
      181 acaaacatca tccctatatc atccctggct tatttgatgg gtgtatttaa tttatcatcc
      241 ctggccaata attttctacc cacgcagctt gtgtggatat tgtcaaaata aatcaacaac
      301 attaattaac aactgaaagg aaactttatg aataagaaat taataggaca caatcagccg
      361 ccattacagc ttgaggattt tttaattcta gatgctgaaa ctaggtatga atctatatat
      421 agaaaatgtc taatcaacag aggacatagc gttttaaatt aaaatagatt cgacaaaaaa
      481 aattcaatta ttagtaaaat tagcaatttt aagttattgt taaaattatg aataattaat
      541 aaaataataa tcaatcaatg aatcaaatga atatatatat ggcggactta gtccacaatc
      601 gttttatggg aagcagcgca aatgataccg taccttataa tgttgcaagt atttcagctt
      661 acacaaaatc gctctttaat aagaacacac agattaagat attcaagtat acagatgatc
      721 ttattgaggc agttaaggaa aaccctccaa acattattgc attttcacat tatatttgga
      781 acgcacatct aaatcaatct attggaaatt atcttaaaga aaaatatcca gagttactaa
      841 tagttgcagg tggtccatct attaaaacta cgcataacga aatcaaagaa tttttagaag
      901 tcaataaata tatagatctt tgtgtcatta atgaagggga aggtgcattc ctgaattgtg
      961 ttattgccta cgatcaggga gcaaagagtt ttatggataa aaagcagatt attccaaatg
     1021 tcgggtattt atctggaggt tctcttattt ttgaagttga aaacaaattt tcggatcttg
     1081 ataatatacc atccccttat ctacttggat atttagacga atttctggaa caaggcttaa
     1141 tgccaatatt tgagactaat cggggttgtc catttaaatg tacatattgc gcatggggta
     1201 aagctgctct gagtaaagtt cgtaaaatgt cgttacctaa agttttaaag gaaatggagt
     1261 acgtggcaga aaaataccct caatgtgcgg attggataat tggagatgca aactttggaa
     1321 tgcttccaag agacattgaa atagctcata aaataaatga attaaggaaa aatagaccat
     1381 caattaaatc agtaacagtt tatgaaagta aaaatacaac aatacgtagc attgaaattt
     1441 caagtatatt acgtaagtct ggagatatta aaaaacagca agatttttca ttaattgctt
     1501 tacaaacatt agatgaaact gcacagaagt attctaaaag aagtaatata aaattagatg
     1561 atgtaccttt aaaaatcaaa gcttttcgtg acgctggaac tggagtaaga actgatattt
     1621 tatcagggtt acctggggaa agtttcgagg gacatatgtc aacacttcga cagtgttttg
     1681 attacgggtt tgatcatata gggatctaca atgtgattat actgcctgga accgaaatgg
     1741 aaactcagga atcaaggaat aattatggaa tcaaaacaaa attccgttta aaggacaatg
     1801 catttggtca atataatgat ataaaatcaa tcgaacaaga agaagtaatt tgttcaaata
     1861 atgctataac agaagctgag ttattaacac tgagatgcat gcattggcat atctggtttg
     1921 gatggaatca tggttttttt aaaccatttt ttaaatatgt gtataaaaat catggactga
     1981 atccagtaga tataatttat aaggttgcta catcggctaa tttaaaaaat aatttaaaaa
     2041 cttctttaga ctgctttaag gaaaattttg aaggagaatt ttttgagtcc cctgaatcac
     2101 ttcgtgagta ctattttaac ccatcagttt ggagtaaaat cctgaataaa ggtttatcaa
     2161 gagcaggttt tatacttaat gcaaaattta tccaagataa agagttatac aaaagtgctc
     2221 tggaggcctt aacaaatgtt gtatctacta ataaagtaga gaaagataaa ttaaagattt
     2281 tatctaattt actattgcaa aa
//
LOCUS       DASCQP010000336         3982 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001212941, whole genome shotgun sequence.
ACCESSION   DASCQP010000336 DASCQP010000000
VERSION     DASCQP010000336.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3982)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3982)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3982
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001212941"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..523)
                     /locus_tag="QF480_05745"
     CDS             complement(<1..523)
                     /locus_tag="QF480_05745"
                     /inference="COORDINATES: protein motif:HMM:NF024873.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease H-like domain-containing protein"
                     /protein_id="HJN06099.1"
                     /translation="MLKDLKLDNVLFIDIETVPQVPDFNNLDDKFKLLWEKKAALLMR
                     NNPDATADKLYSSAGIYAEFGKIVCISCGFMNGKTFRIKSYYGDNEKVLLEDFADLLY
                     KHFNDNYNLLCAHNGKEFDFPYIARRMLVNGIKLPDIINLAGKKPWEVRHLDTMELWK
                     FGDYKHYTSLELLA"
     gene            601..1905
                     /locus_tag="QF480_05750"
     CDS             601..1905
                     /locus_tag="QF480_05750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06100.1"
                     /translation="MKLILKTMFLILIIWVLDSCSKDTKINEPIVEIFSPENNQQYLL
                     PDTIFVSFRVEHDEPIEYIRVSIDDKNMIPVSDQDFVYPSGKNYEGDIYLPLSALSED
                     NSFPPYYLHVVVSDLLQITHTYREISLLNKEMKYKGCFLISRSGINMLEINYFDNNYQ
                     LGLNTSISGDYSGSDISSKANMLYLITSLPDLARAINCTNGELIWSKDPQLPYPEFNS
                     ILVGNNIVYFSTAIGRIIGLTINEGVQIFTTPVLPDSIPNNMCSTANYLLSDLKSRNS
                     DDKIWVSFYKNTGNKFLSFPTSYETVSMYGRKSNNIATIFCNKNSIGSIIQFNVEDNN
                     IASQMELNNIEIHHTCEVDENNFLYSSDNMLFHFNMQNQSYVKITDADEIIIDIKFDD
                     LDNRMFILHPNKVDIFSYPGFNKITTIESTNLLVGVELKFGF"
     gene            2204..3676
                     /locus_tag="QF480_05755"
     CDS             2204..3676
                     /locus_tag="QF480_05755"
                     /inference="COORDINATES: protein motif:HMM:NF012488.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HJN06101.1"
                     /translation="MNKLEKHFSKFKQNTIGDQLEFETPFGIKKMIYADWIASGRLYR
                     PIEDKMTNIIGCNVGNTHTESTETGTLMTNAYHAAQKIIKDHVGADENDVIITAGPGM
                     TAVINKLQRILGLRNCTHISEDKKYTPKDERTVIFITHMEHHSNHTSWIETNAKVVIL
                     DPDDENLVNKDELIKQLEIHKDYDLKIGSFIGGSNVTGVIPPIYEMAEIMHTYGGVAM
                     VDFAGSAPYIDINMHPVNPLQCLDAIFFSPHKFLGGPGSSGVMIFNSNLYKIEVPDKP
                     GGGTVEWTDPWGGHKYFDDIELREDGGTPGFLQAIRAALAIKLKDQMNTGLIAQRKEE
                     LIEIAFEGLTKVKGIHILAENVKKRLGIMTFWFEHIHYNLIVKLLNDRYGVQVRGGCA
                     CAGTYSHFLLNLSPEESQRIFERIKNGDLSIKPGFVRISLHPTMTNKELEYIISGVND
                     IVDNHEEWGNNYDYDQHTNEFTHKNVLPNIHQKIDEWFKI"
     gene            complement(3691..>3982)
                     /locus_tag="QF480_05760"
     CDS             complement(3691..>3982)
                     /locus_tag="QF480_05760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005777720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HJN06102.1"
                     /translation="FDVLAGTYDYNEDGEGIFNGEPVAYRGLFLIDKHGVVRHQVVND
                     LPLGRSINEALRMVDALQFFEENGEVCPADWKPGEDAMVADADGVAKYLSEH"
BASE COUNT         1383 a          686 c          671 g         1242 t
ORIGIN      
        1 cagcgagaag ctctaaggaa gtatagtgct tataatcccc aaatttccaa agctccattg
       61 tatctaaatg cctaacttcc caaggctttt tccctgcaag atttattatg tcaggaagct
      121 ttatcccatt aacaagcata cgacgcgcta tatatgggaa gtcgaattct tttccattgt
      181 gtgcgcatag cagattataa ttgtcattaa agtgtttgta aagaagatcg gcaaaatctt
      241 caagcaatac tttctcatta tcaccataat aggacttaat cctaaaggtc ttaccattca
      301 taaaaccaca tgatatgcat acaatttttc caaattcagc ataaatacct gcacttgaat
      361 aaagcttgtc agctgttgca tcagggttat tccgcataag taatgctgct ttcttttccc
      421 aaaggagttt aaatttatcg tcgagattat taaaatcagg cacctgcgga acagtctcaa
      481 tgtcaataaa taacacatta tcgagtttca aatctttaag catatatttt agtatttatt
      541 tgatgagaaa tatacagata aaaagcttac attcgacaag gaatattgaa tcggaaatac
      601 atgaaactta tcttaaaaac aatgttcttg atattaatta tctgggtgtt agattcatgc
      661 tcaaaagata ctaagatcaa cgaaccaatc gtcgaaatat ttagtcctga aaacaaccaa
      721 caatatttac ttcctgacac aatctttgtt agttttcgag ttgaacatga cgaaccaatt
      781 gaatatatta gggtaagtat agatgataaa aatatgatac ctgtttcaga tcaagatttt
      841 gtgtatccta gcgggaagaa ctatgaaggt gacatttatt tgccattaag tgcattgtct
      901 gaagataata gcttcccgcc ttattattta cacgttgttg taagcgactt attacagatt
      961 actcacactt atcgtgagat aagcttgtta aataaagaaa tgaagtacaa aggttgtttc
     1021 ttaattagca gatccggaat caatatgctt gaaataaatt actttgacaa caattatcaa
     1081 ttagggttaa atacctcaat aagtggtgat tactcgggat cggatatttc ttctaaagcc
     1141 aatatgctat atcttatcac tagtttaccc gatttggcaa gggctattaa ttgtactaat
     1201 ggagagttaa tatggtcaaa agatcctcaa cttccatatc ctgaattcaa cagtattctt
     1261 gtaggtaaca atatagttta tttcagcaca gcaatcgggc gcattattgg actcacaatt
     1321 aatgaaggcg ttcaaatatt tacaactcca gttctccctg attcaattcc aaataatatg
     1381 tgctctactg ctaattactt gctttcagat ttgaaatcac gaaactctga cgataagatt
     1441 tgggtttctt tttataaaaa tactggcaat aaattcctgt cttttccaac tagctatgaa
     1501 acagtttcaa tgtatgggag aaagagtaat aatattgcga ctatattttg taacaaaaat
     1561 tctattggaa gtataatcca atttaatgtt gaagataata acattgcaag tcagatggaa
     1621 ttaaataata ttgaaataca tcatacttgc gaagttgatg aaaacaattt tctctattcc
     1681 agcgacaata tgctatttca ttttaacatg caaaaccaat catatgtaaa aattacagat
     1741 gcagatgaaa ttattattga tataaagttt gatgatttgg ataatcgcat gtttatcctt
     1801 cacccaaata aagtagatat tttttcgtac cccggtttta ataaaataac aactattgaa
     1861 tcaacaaatt tgttagtagg agttgagcta aagttcggat tttagtttag attgttgatt
     1921 tattctttaa aatattgtag ggatcttttt ggacaaacag ctcctagtca caataatttt
     1981 taattttacc gcacaaagtt aagattcaac aattatcgag acttttgcaa aacctctttt
     2041 attcaacctc gtgcaaaggg aagtctctgt tagacaaata ataaacatta tagattcttt
     2101 actatgctca ggataataag atattataat ttttgcaaaa gtctccgtta ttgtgtcttt
     2161 tcatggctac tataaatacc aagcacacta aagttaagcg tgaatgaaca aactagaaaa
     2221 acatttttca aaattcaaac aaaatactat tggtgatcaa ctggagtttg aaactccttt
     2281 tggtataaaa aaaatgattt atgctgactg gattgccagc ggtcgtttgt acagacctat
     2341 agaggataaa atgaccaaca tcattggctg caatgttggc aacactcata ccgaaagtac
     2401 cgaaactgga actttaatga ccaatgctta tcatgctgca cagaaaataa taaaagacca
     2461 tgttggtgca gatgaaaatg atgttattat tactgctgga cctggcatga cagccgttat
     2521 caataaacta caacgaattc ttggtttgcg taactgtact catatttcag aagataaaaa
     2581 atatactcct aaagatgaaa gaacggttat attcataact catatggagc accattccaa
     2641 tcatacttca tggattgaaa ccaatgccaa agttgtaata cttgaccctg atgatgaaaa
     2701 tttggtaaac aaagatgagt taattaagca actagaaata cacaaagact acgatttaaa
     2761 gataggatcg tttattggcg gatccaatgt aacaggagtt atacctccaa tttatgaaat
     2821 ggcagaaatt atgcacacct acggtggtgt tgctatggtt gattttgccg gatcagcgcc
     2881 ttatattgat attaatatgc accctgttaa ccctctgcag tgccttgatg caatattttt
     2941 ctcacctcat aaatttcttg gtggacctgg tagttcaggc gttatgatat ttaatagtaa
     3001 cctatacaaa atagaagtgc cggacaagcc agggggaggt actgtagaat ggacagatcc
     3061 ttggggagga cataaatatt ttgatgacat tgaactacga gaagatggtg gtactcccgg
     3121 ttttttgcaa gcaatacgag cagctcttgc aattaaacta aaagaccaaa tgaatactgg
     3181 tttaatcgct caaaggaagg aagagctaat tgaaatagca tttgaaggat taacaaaagt
     3241 aaaaggtatt catatactcg cagaaaatgt aaaaaaacgt ctcggaataa tgacattttg
     3301 gttcgaacat atccattata acctaattgt gaagctattg aatgatcggt acggcgttca
     3361 ggtaagaggt ggctgtgcat gtgccggaac atacagtcat tttttactaa atctttcacc
     3421 agaagagtca caacgaattt ttgaacgaat taaaaatgga gatttatcca ttaagcccgg
     3481 gtttgtgaga atttcacttc atcctactat gaccaataaa gaactcgaat atattatatc
     3541 aggagtaaat gatattgttg acaatcatga agagtgggga aataactacg actacgatca
     3601 acacacaaat gagtttacac acaaaaatgt attaccaaat attcatcaaa agattgatga
     3661 atggtttaag atataatctt tcttttatta ttaatgctcg ctaagatact ttgcaacacc
     3721 atctgcatca gcaaccatgg catcttctcc aggtttccaa tctgccggac agacttcacc
     3781 attttcctca aaaaattgca atgcatcaac catgcgtaga gcttcattaa tgctacgccc
     3841 taaaggaagg tcattcacaa cctggtgacg aacgacaccg tgtttgtcaa ttaaaaataa
     3901 accacgataa gctacaggtt ctccattaaa aataccttca ccgtcttcat tataatcata
     3961 ggttccggca agtacgtcaa aa
//
LOCUS       DASCQP010000337         1827 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001213991, whole genome shotgun sequence.
ACCESSION   DASCQP010000337 DASCQP010000000
VERSION     DASCQP010000337.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1827)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1827)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1827
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001213991"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..634
                     /locus_tag="QF480_05765"
     CDS             <1..634
                     /locus_tag="QF480_05765"
                     /inference="COORDINATES: protein motif:HMM:NF027681.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HJN06103.1"
                     /translation="HKPERVLYPSSSAAYPTSLQTTEGAIALSEGDIDFKKNLGTPDM
                     TYGWTKLTGEFLAQIAAAHYGISIVCIRPFSGYGEDQETDYPVPAIALRAAKKENPFE
                     VWGSGKQGRDFVHIYDIIDFIQILMDNVSDGSAYNIGSGNLTSFLDLIDVFTTFAGYK
                     PTIKPLLDKPVGVHSRYCDMSLVEKKFGWKAKISLEEGMRRVYDAAKRKA"
     gene            678..1106
                     /locus_tag="QF480_05770"
     CDS             678..1106
                     /locus_tag="QF480_05770"
                     /inference="COORDINATES: protein motif:HMM:TIGR02436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four helix bundle protein"
                     /protein_id="HJN06104.1"
                     /translation="MRLTRRMNDYKKNKNRGFKQLRVWQDSVDLFVLVNKLLSSFPYE
                     HNKSKINTLDASHSIQRNISEGYCRRSPKEYLNFLNIALGSCGELNSSMISFHAVDIL
                     SDDNYELFDDLHYKTENGLLTLAKSMQTKIINKESWDDRY"
     gene            1249..>1827
                     /locus_tag="QF480_05775"
     CDS             1249..>1827
                     /locus_tag="QF480_05775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06105.1"
                     /translation="MNKNTIVCFGPGPMFKGGIANYNTSLAKAFDKLENTEVHIVSWT
                     QQYPAIIPRDFIDKKSKVDQLEGTNIKVHYITNYNNPASWKATVRLIAGLKPSKVIFQ
                     WAIAIQGLPMGYIARKLKKLKEVEVLFDLHFVIQKEGSALDNKLTKVGIKNADSYIVH
                     AFKTADELKEIFPDRQFEIIERGKEITGSGIKV"
BASE COUNT          641 a          285 c          340 g          561 t
ORIGIN      
        1 tcataagcct gaacgggtat tatatccaag ttcgagcgct gcatatccta caagtcttca
       61 aacaaccgaa ggagcgatag cacttagcga aggcgatatc gattttaaaa agaatcttgg
      121 cacgcctgat atgacatacg gatggacaaa gcttacagga gagtttttag ctcaaattgc
      181 cgcagcacat tatggtattt caatagtttg tattcgacca ttttctggat atggagaaga
      241 tcaggaaact gactaccctg ttcctgcaat tgctttgcga gctgctaaaa aagaaaatcc
      301 ttttgaagtt tggggttccg gaaaacaagg tcgtgatttt gttcatattt atgatataat
      361 cgacttcatc caaattttaa tggataacgt aagcgatggt tctgcttata atataggttc
      421 aggaaatcta acatcttttt tagatttaat agatgtattt accacatttg caggctataa
      481 accaactatc aaacctttgt tagacaaacc tgttggtgta cattcgaggt actgtgacat
      541 gtctcttgtt gagaaaaaat ttggttggaa agcgaaaatc tctcttgagg aaggaatgcg
      601 cagggtttat gatgcagcta aaagaaaagc ttaagattaa aatattttca ggagtattgg
      661 attaatggag tgatggaatg cgactaacaa ggagaatgaa tgattacaag aaaaataaaa
      721 acagagggtt caagcaatta agagtttggc aagattctgt tgatttattt gttcttgtta
      781 ataaattgct tagttcattt ccttacgaac ataataaatc aaaaataaat acactcgacg
      841 cttctcacag tattcaaaga aatatttcag aaggttattg tcggagatcg cctaaagagt
      901 atttgaattt tctaaatata gcattgggct cctgtggaga gcttaatagt tcaatgataa
      961 gctttcatgc agtagatatt ctgtcggatg ataattatga attatttgat gatctccatt
     1021 ataaaactga aaacggatta ttaactcttg ctaagtcaat gcaaactaaa ataattaata
     1081 aggaaagttg ggatgacaga tattaatatc agatttactt ttattaaact ttcaaaaaaa
     1141 aattatgctc tactccatca ctccatcact ccatcactcc attactccat tactccatta
     1201 ctctaatata gttttattat aaagtaacta tctaaacaat aaagtttcat gaacaaaaac
     1261 accatcgttt gctttggccc aggtccgatg tttaagggtg gaattgctaa ttacaatact
     1321 tcactggcga aggcttttga taagttagag aatacagaag tgcatattgt ttcctggact
     1381 caacaatatc ctgcaataat tcctagagat tttattgaca aaaaaagcaa agttgatcaa
     1441 cttgaaggaa caaatattaa ggtccattac attactaatt ataataatcc ggccagctgg
     1501 aaagcaactg taaggctaat tgcaggacta aagccatcaa aagtaatttt ccaatgggct
     1561 attgcaatac aaggattacc aatgggttat attgctcgga aattgaaaaa gcttaaagaa
     1621 gttgaagtat tattcgatct tcattttgtg atacaaaagg aaggcagcgc actggataac
     1681 aaactcacaa aggttggaat taaaaacgct gattcatata ttgtacatgc ttttaaaaca
     1741 gccgatgaac tcaaagaaat ttttcctgat aggcaatttg agattattga aagaggtaag
     1801 gaaattactg gtagtggtat aaaagta
//
LOCUS       DASCQP010000338         2452 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001218069, whole genome shotgun sequence.
ACCESSION   DASCQP010000338 DASCQP010000000
VERSION     DASCQP010000338.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2452)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2452)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2452
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001218069"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2452)
                     /locus_tag="QF480_05780"
     CDS             complement(<1..>2452)
                     /locus_tag="QF480_05780"
                     /inference="COORDINATES: protein motif:HMM:NF019325.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="CARDB domain-containing protein"
                     /protein_id="HJN06106.1"
                     /translation="YQGGDQYMQGLDTSASHKTLELALDISPLLTHVSTDHPVKFFVQ
                     IAENDKYNMGEGEILYYSVVDRTDGFSEVVCNEVPQNINNNAVTTLQITYTPVFDKVK
                     IITEELPGISPGTVQIVQLEAESGYPPYSWEVLKPYTFNTIQNDFPQISDERLAFENN
                     TDARVEVSLPFNFPYYGDTIQNITIYLDGFIMFNDEPYPYPYYVGEESLIKREKVIAP
                     FMSDMMLNYEDVDGVWINKYYDYVGIRWKVSAETSYGSSDVNFSVLLYPNGKIETHYG
                     SMDYPQNRLWDVGISSGDNTNYTLNQFGHHLDEVSNTAFEYSPPELLTDINVNQLGEL
                     SIMINDESQIYPLTVQVKDDKGIIDVASYNISSSGLTFNYHISPGNNNTIEYNEISEL
                     SLYVNNNSSNTLENVHMNLSSLSTYVQLSDTLVSIGTLEPQQSIEISNATDISVLPQV
                     PDKFNSIIRCNLTTDDKHYTSNINLTVNAPDFRIIDTQIIDNNNNVLYPGETATIKFS
                     IQNGGHARSMDVTCKLSDEYTHVYIPPQESDIIALNPGDTTSVEFTIAAAFSTPMGTE
                     IQLDLAIYNSEYDFKTIATNIRVGHLPVLIIDLNPAHKSGPPIKTILNNLGLQNTYTI
                     SVPYNLDDYLSVFVCLGGFFNNYYLTEYEGTVLADYLQSTGKIYMEGSATWGSDPQTS
                     LHNLFNLIADPPGNYFILDTIVGVNESYTKDMIFNIEEQYSYVNYFLHPDEGASTFMI
                     SNNDESSGVVIANQTENYSTIGSNILFGALIDTDTINTKEDYLLSILDFFDIKKYIYV
                     DTPELESHGRNINIHVYP"
BASE COUNT          755 a          399 c          433 g          865 t
ORIGIN      
        1 tttggataaa cgtggatgtt gatatttcta ccatgagact ctaattccgg agtatcaaca
       61 tagatatatt tttttatatc aaaaaagtcg agaatgctta atagataatc ctcttttgtg
      121 ttgatcgtat cagtatctat taaggcacca aacagtatat ttgatccgat agtactataa
      181 ttttcagttt ggttagctat tactacccca gaagattcat cattattact aatcataaat
      241 gtgctagctc cttcatcagg atgtaaaaaa taattaacgt aagaatattg ttcttcaatg
      301 ttaaaaatca tgtcttttgt gtagctttcg tttacaccta caatcgtgtc tagaataaag
      361 tagttacctg gtgggtcagc aataagatta aataaattgt gtaatgatgt ttgtggatcg
      421 ctaccccagg ttgcacttcc ttccatataa attttacctg ttgattgtag ataatctgca
      481 agtactgtac cttcatattc agttagatag tagttgttga aaaatccacc aagacataca
      541 aatactgaca aataatcgtc tagattgtaa ggcacagata tggtataagt attttgaagg
      601 cccagattgt taagaatagt cttaattggt ggccctgatt tatgtgctgg gttgaggtca
      661 attataagta ctggcaaatg gcccactctt atatttgtag ctattgtttt aaaatcatat
      721 tcactattat aaatcgccag gtctaattga atttctgtgc ccattggagt tgaaaaagca
      781 gcagctattg taaactctac ggaggtggta tcaccagggt ttaaggcgat gatatctgat
      841 tcctgaggtg gaatataaac atgtgtatat tcatcactaa gtttacatgt cacatccatt
      901 gaccttgcgt gccccccatt ttgtatagag aattttattg tggcggtttc acctggataa
      961 agaacattat tgttgttatc aattatctgt gtgtcaatta tcctaaaatc aggagcgtta
     1021 actgttaagt ttatgtttga ggtataatgt ttatcatctg ttgtcaagtt gcaacgaata
     1081 atagaattaa atttatcagg tacctgaggt aatacactta tatcagtggc attgcttatt
     1141 tcaattgatt gctggggttc aagcgttcca atacttacga gggtatcact aagttgtaca
     1201 tatgtactta aagatgaaag attcatatga acgttttcca aggtattaga ggaattattg
     1261 ttaacgtaaa gacttagttc ggatatttca ttatactcaa ttgtattatt gttgccagga
     1321 ctaatatgat agttgaaagt taagccggaa gatgatatat tatatgatgc tacgtcaatt
     1381 attcctttgt cgtctttaac ttgaacagtt agaggatata tttgtgattc atcattaatc
     1441 attattgaaa gttcacctaa ttgatttaca ttaatatccg ttagcagttc aggaggagaa
     1501 tactcaaaag cagtatttga gacttcatca agatgatgtc caaattgatt tagagtgtag
     1561 ttcgtattat caccagatga tattccgaca tcccatagtc tattttgcgg ataatccatt
     1621 gatccataat gagtttcaat ttttccatta ggataaagca aaacactgaa attaacatcg
     1681 cttgagccat aagatgtttc ggcagagact ttccatctta taccaacata gtcatagtat
     1741 ttgtttatcc aaacaccatc aacatcttca taatttaaca tcatatctga cataaatggt
     1801 gcaataactt tctcccgttt tattaaagat tcttcaccta cataatatgg gtatgggtaa
     1861 ggctcgtcgt tgaacataat aaatccgtca agatatattg ttatattctg tatcgtgtca
     1921 ccataataag gaaagttgaa gggaagagat acctcaactc gggcatcagt attattttca
     1981 aacgctaacc tttcatcact tatttgcggg aaatcatttt gtatcgtgtt aaatgtataa
     2041 ggctttaaaa cttcccaact ataaggtgga taaccacttt ctgcctcgag ttgaacaatt
     2101 tggactgtgc ctggagatat tcctggtagt tcttcagtga ttatttttac tttatcaaac
     2161 acaggtgtat aggttatctg taacgtagta acggcattat tgttaatgtt ctgtgggact
     2221 tcgttacata caacttctga aaatccatct gttcgatcaa caacactgta atatagtatt
     2281 tcgccttctc ccatattata tttgtcattt tcagcaattt gcacaaagaa ttttactggg
     2341 tgatctgtag aaacatgagt taataaaggg cttatatcta atgctaattc taatgtttta
     2401 tgtgatgctg atgtatcaag tccctgcata tattgatcac ctccctggta gt
//
LOCUS       DASCQP010000339         4110 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001218683, whole genome shotgun sequence.
ACCESSION   DASCQP010000339 DASCQP010000000
VERSION     DASCQP010000339.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4110)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4110)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4110
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001218683"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1251
                     /locus_tag="QF480_05785"
     CDS             <1..1251
                     /locus_tag="QF480_05785"
                     /inference="COORDINATES: protein motif:HMM:NF013717.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin dinucleotide binding
                     domain-containing protein"
                     /protein_id="HJN06107.1"
                     /translation="VWEAKSDWEIFREIAKSTSKLAETHMPDPVKDVVNVPLQHDTKA
                     EISQTDIKDWSKGECEPIPGKTMHGLAIVERDYTQIYNKFISLGENIRNGLGAHGNSY
                     QCEDIYEEMLEDRDHVQEINGVTYPSLKDDREACEAIMQLSTLTNGELSHRAYVNAEK
                     RTGMKLTDLIDGSQEKRISYKDLQIQPQRYNNSPLWSGLMNNGRAYTAYSYNVERLVP
                     WRTLTGRQHLYLDHEGYIKFGENLPTYKPSPKPEAYGELKVSVAEGKARVLNVLTPHG
                     KWHIHSTYGDTLRMLSLSRGMEPCWLSETDADEMGIEDNDWVEVFNDNGVYCTRACVS
                     SRIPKGICIVYHSPERTYTQPKSQVRGNRRGGGHNSFTRVHLKPNLLMGGYGQFTFHF
                     NYWGPVGVNRDTHVIVKKMTKVVF"
     gene            1287..2777
                     /gene="narH"
                     /locus_tag="QF480_05790"
     CDS             1287..2777
                     /gene="narH"
                     /locus_tag="QF480_05790"
                     /inference="COORDINATES: protein motif:HMM:TIGR01660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009325 - nitrate reductase complex
                     [Evidence IEA];
                     GO_function: GO:0008940 - nitrate reductase activity
                     [Evidence IEA];
                     GO_process: GO:0009061 - anaerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase subunit beta"
                     /protein_id="HJN06108.1"
                     /translation="MDIRSQIGMVFHLDKCIGCHTCSIACKNIWTDRKGAEYMWWNNV
                     ETKPGTGYPTKWEDQGIYKGGWEKLGKSLKLAGAGKAKGIGNIFHNPNMPTVGDYYEP
                     WTYNYENLFNAPEGDDQPVARPISLITGENIDVMAGPNWDDDLSGSKDYARQDVNLDK
                     VTEQEKEAMFQLERMAMFYLPRICNHCLNPACVAACPSGAIYKRGEDGIVLINQNKCR
                     AWRMCVTACPYKKSYYNWKGGKSEKCILCFPRLESGQIPACMHSCVGRIRYLGAMLYD
                     ADRIKEIATCDETEIVRKQREIYLDPFDEKVITEAKKNGIADSTIEAAQKSPVWKFVK
                     KWEIALPLHPEFRTMPNLFYVPPLLPAMASVENSKYRSTSESLWAGIEKSRLPAEYLA
                     SLFSAGNTGVINNVLKKLMAVRLHRRDVTVGDLSDKEIEFALKDTGLTGEIADDIFRL
                     TSLPRYNERFIIPPAHKEEAKELLINTDDLKGGGGFGFKTGTERIP"
     gene            2788..3372
                     /locus_tag="QF480_05795"
     CDS             2788..3372
                     /locus_tag="QF480_05795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06109.1"
                     /translation="MRKYLLIAELFAYPSSDLQDSIKACVNEITNSYPESIRTLSSFE
                     KHLNRLDLGKQEEYYSKTFDVSAQCSMDLGYVIFGEDYKRGEFLVKMKNEQRLAGHNF
                     EIELADYLPNVLRLLYYHKNKDFVEELAYCITIPALKEILNKFKDTDNVYREVLVMLL
                     NILEKDFGHSNREQINISKEKDNKVFQKACNVKC"
     gene            3384..4106
                     /gene="narI"
                     /locus_tag="QF480_05800"
     CDS             3384..4106
                     /gene="narI"
                     /locus_tag="QF480_05800"
                     /inference="COORDINATES: protein motif:HMM:TIGR00351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009325 - nitrate reductase complex
                     [Evidence IEA];
                     GO_function: GO:0008940 - nitrate reductase activity
                     [Evidence IEA];
                     GO_process: GO:0019645 - anaerobic electron transport
                     chain [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="respiratory nitrate reductase subunit gamma"
                     /protein_id="HJN06110.1"
                     /translation="MLNNFLFIGLPYISITIMLVGSIVRYRSRGYQVSSLSSQFLESR
                     RLFFGTNPFHIGIIFLFFGHLVAFLFPSSVIAFNRVPLRLFIIEVSAFTFGLLTLFGA
                     IVLLIRRLSNKSLLIVTSKVDILVYVAIFSQVISGLLVAYYVRWGSTWFATSLTPYLE
                     SLFTFRPNIKVISEMPFLVQYHVVSAFVLVALIPFSRLMHILVFPFRYIIRGYQYFIW
                     NRDRKKLRNSDETFPDIKATNN"
BASE COUNT         1420 a          620 c          870 g         1200 t
ORIGIN      
        1 gtatgggaag caaaaagtga ctgggagatt ttccgagaga tcgcaaaatc aactagcaaa
       61 cttgcagaaa cacatatgcc ggatcctgta aaagacgtgg taaatgtacc tcttcagcat
      121 gatacgaaag cagaaatatc gcaaaccgat ataaaggact ggagtaaagg agaatgtgaa
      181 ccaatccctg gcaagactat gcatggatta gccattgtag aaagggacta tactcaaatc
      241 tataataaat ttattagtct aggtgaaaat attagaaatg gattgggtgc ccatggaaat
      301 agttatcaat gtgaggatat ttacgaagaa atgcttgaag accgagatca tgttcaagaa
      361 atcaatgggg taacttaccc atcactcaaa gatgacaggg aagcttgcga ggcaataatg
      421 cagttatcaa ctctaactaa tggcgagctt agtcacagag catatgttaa tgccgaaaaa
      481 agaacgggca tgaaactaac cgatctgata gatggtagcc aggaaaaaag aattagttat
      541 aaagacctgc agattcaacc gcagagatat aataattcac cgctatggtc tggtttaatg
      601 aataacggaa gggcttacac tgcatattca tataatgtag aaagattagt accttggaga
      661 actcttacag gcagacagca cctatacctt gaccatgagg gttatataaa attcggagag
      721 aatctcccaa cctacaaacc ttcaccaaaa cctgaagcat acggtgaatt aaaagtttca
      781 gtggccgagg gtaaggcaag agtgctaaat gtacttaccc cacatggaaa atggcatatt
      841 cattcaacat atggagatac tttgagaatg ctttctttat caagaggaat ggagccatgt
      901 tggttgagtg aaacagatgc tgatgaaatg ggaattgaag ataatgattg ggttgaagtt
      961 tttaatgata atggtgtata ctgtacaagg gcatgtgtaa gttctagaat accaaaagga
     1021 atttgcattg tttaccattc acctgagaga acttatacac agccaaaatc acaagtaagg
     1081 ggaaacagaa gaggcggagg acataatagt tttacacgag ttcatttaaa acctaatttg
     1141 ttaatgggag gctatggtca gtttactttc cattttaatt attggggtcc agttggcgtt
     1201 aacagggata ctcatgtaat agtaaaaaag atgaccaaag tagtttttta actaaattaa
     1261 gaaggacaca ataaataatt aagattatgg atattaggtc acaaatagga atggtttttc
     1321 atttagataa atgcataggg tgtcatacat gctctattgc ctgcaaaaat atttggactg
     1381 acaggaaagg tgctgagtat atgtggtgga ataatgtaga aactaaacca ggcacaggct
     1441 atccaaccaa atgggaagat cagggcatat acaagggtgg atgggaaaag ttaggtaaat
     1501 cacttaaatt agccggtgct gggaaggcga aaggtattgg caatatattt cacaacccga
     1561 atatgcccac cgttggagat tattacgaac catggacata taattacgag aatcttttca
     1621 atgcaccaga aggtgatgat caacccgttg caaggcctat ttccttaatt actggtgaaa
     1681 atatagatgt tatggccggc ccaaattggg atgatgattt aagtgggtct aaggattatg
     1741 ccagacaaga tgttaacctt gataaagtta ctgaacaaga aaaagaagcc atgtttcagc
     1801 ttgaaagaat ggcgatgttt tatctcccaa ggatatgcaa tcactgtctc aacccagcgt
     1861 gcgttgcagc gtgtccgtct ggggctattt acaaaagggg cgaggatggt attgttttaa
     1921 taaaccagaa caagtgtcgt gcctggagaa tgtgtgtgac agcatgcccc tataaaaaaa
     1981 gttattataa ctggaaagga ggcaaatctg aaaaatgtat tttgtgtttt ccacgactag
     2041 aatcgggtca gatacctgct tgcatgcatt catgtgtagg aagaatccgg taccttggag
     2101 caatgctata cgatgccgac agaattaaag aaatagctac gtgtgatgaa acggagattg
     2161 taagaaagca aagagagatt tacctggatc cgtttgacga aaaagttatt actgaagcta
     2221 agaagaacgg aatagcagat tcaaccattg aagcagctca gaaatctcct gtttggaaat
     2281 ttgttaagaa atgggagata gccctaccgt tgcaccctga attcagaaca atgccaaatt
     2341 tgttttatgt accaccatta ctaccggcca tggcaagtgt ggaaaattca aagtatcgtt
     2401 caactagtga aagcctctgg gcaggaattg aaaaatcaag attaccagcc gaatatttgg
     2461 ctagcctttt ttctgctgga aatacgggcg ttataaataa cgtgttaaaa aaattgatgg
     2521 cagtacgctt gcacagaaga gatgtaacag ttggtgattt atctgataaa gagattgagt
     2581 ttgcccttaa ggatacagga ttaactggtg aaattgccga tgatatattc agattaacat
     2641 cattaccaag gtataatgaa cgctttataa tacctccggc tcataaggaa gaagcaaaag
     2701 aattactgat aaatacagat gaccttaaag gtggtggtgg atttgggttt aaaacaggaa
     2761 cagaaaggat tccttaataa tataaaaatg agaaagtact tattaattgc ggagctattt
     2821 gcttatcctt catctgattt acaggatagt attaaggcat gcgtaaatga aataactaat
     2881 agttatcctg aaagtattag aactttatca agttttgaaa agcatttgaa caggctggat
     2941 ttagggaagc aagaagaata ctacagcaaa acttttgatg ttagcgcaca gtgtagtatg
     3001 gatttaggct atgttatatt tggggaagac tataaaagag gagagttttt agttaagatg
     3061 aaaaatgaac aaagattggc aggccataat tttgaaattg aattggccga ctacttacca
     3121 aatgtactta gattgctcta ttatcataaa aataaagatt ttgtagaaga acttgcatat
     3181 tgcatcacaa ttccagcgct aaaagaaata ttgaataaat tcaaagatac agataacgta
     3241 tatcgggaag ttctagttat gttgttgaat atattagaaa aggattttgg gcatagcaac
     3301 cgagaacaaa taaatatctc taaagagaag gataataaag tgtttcaaaa agcttgtaat
     3361 gttaaatgtt aaaaactaaa aatatgttga ataattttct tttcatcgga ttaccttata
     3421 tatcaatcac cataatgttg gtcggttcaa tagttaggta caggtctaga ggatatcaag
     3481 tttcatcgtt gtcctcacaa tttttagaaa gcagaagact attttttgga accaatccgt
     3541 ttcacatagg tataatattt ttattctttg gacatttagt tgcttttttg tttcctagta
     3601 gtgttattgc atttaacagg gtacccctga ggctatttat tatagaagtt tcagctttca
     3661 cctttggttt attgacgctt tttggcgcta ttgttttgtt aataagaaga ttaagtaata
     3721 aaagtttgtt aatcgtcact agtaaagtag atatacttgt ttatgttgcc atattttcac
     3781 aagtgatttc gggattgttg gtagcttatt atgttcgatg gggttccact tggtttgcga
     3841 cctcattaac accatattta gaatctcttt ttacttttag gccaaatatt aaagtcatat
     3901 ccgaaatgcc atttcttgta caatatcatg tcgtatcagc ttttgtttta gttgcgctta
     3961 taccattttc aagattaatg catattcttg tttttccatt tagatatatt ataagaggtt
     4021 accaatattt tatttggaac agagatagaa aaaaactacg aaattcggac gaaacttttc
     4081 ctgacattaa agcaacaaat aattaaggta
//
LOCUS       DASCQP010000340         8586 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001224192, whole genome shotgun sequence.
ACCESSION   DASCQP010000340 DASCQP010000000
VERSION     DASCQP010000340.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 8586)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8586)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8586
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001224192"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..2475)
                     /gene="infB"
                     /locus_tag="QF480_05805"
     CDS             complement(<1..2475)
                     /gene="infB"
                     /locus_tag="QF480_05805"
                     /inference="COORDINATES: protein motif:HMM:TIGR00487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HJN06111.1"
                     /translation="MTGTSKAVRLSKAAREFNISLDTVISFLTDKGYDIERKPNTKLD
                     PEMYELLTAEFQEEKNVKEVSQKKGLEFVGKETISITDTSTTKTKTQVDTPIEEELMI
                     KNVGVSYEDKRVVEETTITESKETLDDVKKTDSLETSVETEETKQKVDKEGDKDITEP
                     TDSTSVKTTWQETEIEVITDGDSTEKAKTDTDKVDKDKDKAAVGKGKKADLTDDERKD
                     DVNVLGKIDLEKLNQKTRPKKKTKAEKEIEQESKTKAKKKTKSKATEKSGVEEKETQT
                     TETPVTDPPTDDSVEIKDETVSDLEEENFIKTKFKKLSGPKIIDKIELPAEVKRTKKK
                     KPVASSTDNKVGQNKKKRKRIRPKPQTSENAGRTDKTAKGGFKKKASAKKRIVKEEPS
                     VEEIQQKIKDTLARLAPTGKSKAAKHRKRKRESVSQSIQEEIQKQEEENKIIKVTEFV
                     TANEMATMMDVSVTDIITSCMQLGLFVSINQRLDAETIVLVAEEFGFETSFVSVDDNE
                     RLEVTEVEDDPKSLIERSPIVTVMGHVDHGKTKLLDYIRKANVVSGEAGGITQHIGAY
                     EVVSETGKKITFLDTPGHEAFTAMRARGAKVTDVAIIVIAADDSVMPQTKEAINHAQA
                     AGVPIVFAINKMDKPGANSEKVKEELANMNILVEDWGGKFQSQEVSAITGLGINELLE
                     KVLLESELLELKANPNKAAKGTVIEASLDKGRGYVTTILVQDGTLKKGDIILAGPVSG
                     KVKAMFNERNEAVNESGPSNPVLILGLISAPQAGDVFNAMKDEKEAKALAAKRQQLIR
                     EQSIRTQKHVTLDEIGRRIAIGEFKEI"
     gene            complement(2532..3767)
                     /gene="nusA"
                     /locus_tag="QF480_05810"
     CDS             complement(2532..3767)
                     /gene="nusA"
                     /locus_tag="QF480_05810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010261107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor NusA"
                     /protein_id="HJN06112.1"
                     /translation="MDNMNLVETFSEFKEFKNIDRETMMRILEDVFHSMLTKKFGEES
                     NFDIIVNIDKGDLEIWHYRDIVEDGAVEDENLEIAYSDAIKIEPDFEVGEEFSKQIQL
                     ADFGRREVLSIRQNLVSRILDYEKDNVYKKYKERVSEIITGEIYQVWKKEILILDDDG
                     IELILPKSEQIPSDYFRKGDSIRAVVLKVDMRNNSPVIILSRTSTIFLERLFEAEVPE
                     VYDGLITIKNIVRVPGERAKIAVESYDDRIDPVGACVGMKGSRIHGIVRELKNENIDV
                     INFTNNNSLYIQRSLSPAKITSIKIDEETKRAEVFMKPDQVSLAIGKGGFNIKLAGKL
                     TGYEIDVYRDSDSEMEDVDLVEFVDEIDQWILDELNTIGCDTAKSVLELDKKELVTRT
                     DLEEETILEVLRILKSEFE"
     gene            complement(3790..4251)
                     /gene="rimP"
                     /locus_tag="QF480_05815"
     CDS             complement(3790..4251)
                     /gene="rimP"
                     /locus_tag="QF480_05815"
                     /inference="COORDINATES: protein motif:HMM:NF002531.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0042274 - ribosomal small subunit
                     biogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome assembly cofactor RimP"
                     /protein_id="HJN06113.1"
                     /translation="MINKEHISKLADECLFGSDRFVVGINIGTDNNISVFIDGDNGVT
                     IANCVELSRYIENSLDRDNEDFELNVSSAGVDHPFILLRQYINNVDSKVKVINKDGEK
                     ITGILKNANKDEIELLEEIKSKNKKIKKISTGKVLTIPMNTIKETKRIITF"
     gene            complement(4303..4373)
                     /locus_tag="QF480_05820"
     tRNA            complement(4303..4373)
                     /locus_tag="QF480_05820"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4339..4341),aa:Gln,seq:ttg)
     gene            4688..7753
                     /locus_tag="QF480_05825"
     CDS             4688..7753
                     /locus_tag="QF480_05825"
                     /inference="COORDINATES: protein motif:HMM:NF022481.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2723 domain-containing protein"
                     /protein_id="HJN06114.1"
                     /translation="MEKFKKLNNLFGWIVFAIATTVYFLTLEPTASWWDCGEYIATAY
                     KLQVGHPPGAPLFQLLGRFFTLFAFGNLENVALMINIMSALSSSFTILFLFWTITMLA
                     KKIMVKSGNTPPLAEGWVILGAGVVGSLAYTFSDSFWFSAVEGEVYAMSSLFTAVVFW
                     AILRWEEVADHRTGFRWLLLISYIIGLSIGVHLLNLLAIPAIVYVYYYKKYTYSNKGF
                     IAAGIISLAILFVIMYLVIPGIVEFAGKFELFFVNSIGMPFNSGTIIYFLIITVIIAG
                     GLYYTYIKRKVVLNTVILAFLFILIGYSSFFMIVIRANANPPINENDPKDAISLLSYL
                     NREQYGSWPIFHGQYFNAPVVDHADGNPVYMKDEKKGNYVIKEDRKGTIPVYDERFTT
                     IFPRMWSNTKPAHKTLYEHFGDIEGRPISVSDGKGGTKVLYRPTFGENLKFFFTYQFN
                     FMYMRYFLWNFAGRQNNIESQGEIQHGNWISGINFIDSWRIGDQSNLPSSMKNPARTQ
                     FYFLPLILGLIGFFFQLNRSKKDTWVVALIFIMTGLAIIIYLNQTPLQPRERDYAYAG
                     SFYAFAIWIGLGVLGLYNALQKKMGNKLLAVSIVSIASLMLVPGIMAEQGWDGHDRSG
                     KYAAADFAKMYLASCEPNAILFTNGDNDTFPLWYVQEVENFRTDVRVVNYMLSSGDWY
                     VSQMGRKVYDSERLPLTINQDFYKKEGGYVPVFERLDQAELIDAIRFIEDDNKGTRVP
                     LQSGEWIDYMPAKRLTLVIDKEAVIASGTVPIEDSAKIVDSMEWTIRQGGLFRNDLML
                     LDLVATNNWERPIYFANPNSHSKVLNVDKYCHLEGVVYRFKPTIATDYIQKIGGVNAD
                     RTYEVLMDENVRWGRLNEEDVIVDRESARNAGMAKQNYVRLAQALLKEHKYDSVIEVL
                     DRGIELFPNNKFPFDYFMISWADFYYKAGAIEKADELVNQIEDRYNEDLAYYNSLNGD
                     FTNEYQEDIQEAIAVMQRLIQVTSQNNQEERSKELEKTFYEHLSTFNLR"
     gene            complement(7836..>8586)
                     /locus_tag="QF480_05830"
     CDS             complement(7836..>8586)
                     /locus_tag="QF480_05830"
                     /inference="COORDINATES: protein motif:HMM:NF014342.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DHHA1 domain-containing protein"
                     /protein_id="HJN06115.1"
                     /translation="DIKQDIPMSKALEIGALALFGEKYGEKVRVVTFDPNLSVELCGG
                     THVDSTGNIGFFKIISESGIAAGVRRIEAVAGEKSEEYVYGQVNKLNSIKDLFKNQPH
                     TLLAVKNIIAEHHSLQKEIDNLKNQQALEISNTLLNNAKVISDIRFISEKTKLDINQA
                     KNLAQKLRLSGENIVAVLSTHNNEKVNLIVSISDKLILTKGYNAGNIIKEISPYIKGG
                     GGGQPFLATAGGKDASGIDAAFQAAKEIVTK"
BASE COUNT         2420 a         1574 c         1446 g         3146 t
ORIGIN      
        1 tatctcctta aattcaccaa ttgcaatcct acgaccaatt tcatcaagtg taacatgttt
       61 ttgtgttcta atactctgtt cacgaatcag ttgttgacgc tttgctgcta atgccttagc
      121 ctctttttca tctttcatag cgttaaatac atcaccagct tgaggtgcag aaattagacc
      181 aagtattaac actgggtttg agggccctga ttcattaaca gcttcgtttc tttcattaaa
      241 cattgccttt acctttcctg aaaccggtcc agcaagtatg atatcacctt ttttcagggt
      301 accatcctga acaagaattg ttgtcacata tccacgaccc ttatcgagtg atgcttctat
      361 aacagtacct tttgcagctt tgttaggatt ggcttttagc tcaagtagtt ctgattcaag
      421 cagtactttc tctagcaatt cgttaattcc taatcctgtt attgcagata cttcctgaga
      481 ttgaaatttt ccaccccagt cctcaacaag gatgttcatg tttgcaagtt cttcctttac
      541 tttttcagaa tttgcaccag gtttatccat tttattaatt gcaaaaacaa ttgggacacc
      601 tgcagcttgt gcatggttaa tcgcttcctt tgtttgtggc ataacgctgt cgtcagctgc
      661 aataacaata attgctacat cggtaacctt tgctcctctt gcacgcatcg cagtaaatgc
      721 ttcatgtcct ggtgtgtcaa gaaaagtgat tttctttcct gtttcagaaa ctacttcata
      781 agctccaatg tgttgtgtaa ttcctccagc ttcaccagac acaacatttg cctttctgat
      841 ataatcgaga agctttgttt taccatggtc aacatggccc attacagtta caattggtga
      901 acgctcaatc agactttttg gatcatcctc aacttcagtt acttcaagac gttcattgtc
      961 atcaacactt acaaaagagg tctcaaatcc gaattcttcg gcgaccagaa ctattgtttc
     1021 ggcatctaac ctttggttaa tggaaacaaa taaacctaac tgcatgcaac tagttataat
     1081 atctgttaca cttacatcca tcattgttgc catttcatta gccgtgacaa actcggtaac
     1141 cttaattatt ttattttctt cttcttgttt ttgaatctct tcctgaattg actgagaaac
     1201 agattcccgt tttcttttac gatgctttgc agcttttgat ttaccagtag gtgcaagtcg
     1261 tgcaagagta tcttttattt tttgttgaat ttcttctact gaaggctctt ctttgactat
     1321 ccttttcttt gctgatgctt tctttttaaa accacccttt gcagttttat cagtccttcc
     1381 agcattctct gaggtttgag gttttggcct aattcttttc ctcttttttt tattttgacc
     1441 aactttatta tcagtggacg aagcaacagg ttttttcttt ttagtacgtt ttacctccgc
     1501 aggaagttca attttgtcaa taatcttagg tccgctgagt tttttaaact tggttttaat
     1561 gaaattctct tcctctaaat cagaaacagt ttcatctttt atctcaacac tgtcatcagt
     1621 tggaggatcc gttacaggag tttctgttgt ttgagtttct ttttcttcaa caccagattt
     1681 ctcagtagcc ttacttttag ttttcttttt agctttagtt ttgctttcct gttcaatttc
     1741 cttttcagct tttgtctttt tcttaggcct tgttttttga ttcagctttt ccaggtcaat
     1801 tttacctaat acattaacat catcctttct ttcatcatca gttaaatcag cttttttacc
     1861 cttaccaact gcagctttat ctttatcttt atctactttg tctgtgtctg ttttagcttt
     1921 ttccgttgaa tcaccgtcag taataacttc aatttctgtt tcttgccaag ttgtcttcac
     1981 tgaagttgaa tctgttggtt ctgtgatatc tttatctcct tctttatcaa ctttttgttt
     2041 cgtttcttca gtttctactg aagtttctag ggaatcagtt tttttgacat catctaaagt
     2101 ttccttcgat tcagtaatgg tagtttcttc aacaactcgc ttatcttcat aagaaactcc
     2161 aacatttttg atcatcagct cctcctcaat aggagtatct acttgtgttt tcgttttagt
     2221 agtggaagta tctgtaatgc taattgtttc ttttcctaca aattcaagtc ccttcttctg
     2281 tgaaacttct tttacatttt tttcttcttg aaattcagcg gtaaggagtt catacatttc
     2341 gggatctagt ttggtattgg gtttgcgctc aatatcataa cccttatcag taagaaaact
     2401 tattacggta tccaaactaa tattaaactc tcttgcagct ttacttaatc ttacagcctt
     2461 actagttcct gtcatacaat cgtttcgttt attcgaacgc aatcattgtg atctgcgtaa
     2521 aaatactatt tttattcaaa ttctgatttc agtatacgca acacctctag tattgtttct
     2581 tcctccagat cagttctggt aaccaattcc tttttatcta attcgagtac gcttttagca
     2641 gtatcgcaac caatagtatt gagctcatct aatatccact gatcgatttc gtctacaaac
     2701 tcgactaggt caacatcttc catttccgag tcgctatctc ggtaaacatc aatttcatat
     2761 cctgttaatt ttcctgcgag ttttatgtta aatccacctt tgccgattgc taacgaaact
     2821 tgatcgggtt tcataaaaac ttcagcacgt ttagtttctt cgtcaatttt aattgatgtt
     2881 atttttgctg gtgataatga cctctgaata taaagagaat tgttgtttgt aaagttgata
     2941 acgtcaatgt tttcattttt taactcgcgt acgattccgt gaattctgga tcctttcatt
     3001 cctacacaag caccaacagg gtcaatacgg tcatcatatg attcaactgc aatttttgcg
     3061 cgttcgccag gtactcttac aatattttta atagtaatca gcccatcata aacttccgga
     3121 acttcagctt caaacaatct ttcaagaaat atcgttgatg ttcttgataa aatgattaca
     3181 ggtgagttat ttctcatgtc taccttaaga acaacagctc taattgagtc tccttttcta
     3241 aaataatcag aaggtatttg ctccgattta ggaagaatta gttctatccc atcatcatca
     3301 aggataagaa tctctttttt ccaaacttga tagatttccc ctgtaatgat ctcgcttaca
     3361 cgctctttgt attttttgta aacattatct ttctcataat caagtattcg agataccaga
     3421 ttttgcctga ttgatagcac ttcccgtcgg ccaaagtctg caagttgtat ttgttttgag
     3481 aattcttcac caacttcgaa atccggttcg atctttattg catctgagta agctatttca
     3541 agattttcat cttcaactgc tccatcttcc acaatatctc gataatgcca aatctcaagg
     3601 tcacctttat caatattcac aatgatatca aaattactct cttcgccaaa tttttttgtt
     3661 aacatgctat gaaatacatc ttctaaaatg cgcatcatag tttcccggtc tatattttta
     3721 aattctttaa actccgaaaa agtttcaaca agattcatgt tgtccatcgt tccttttttt
     3781 cagtaataat taaaaagtta ttattctttt agtttctttt atcgtattca ttggaatggt
     3841 taataccttt ccagtactta tctttttgat ctttttgttt ttgcttttaa tttcttccag
     3901 tagctcaatt tcatctttat ttgcattttt caatatgcct gtaatttttt ctccatcttt
     3961 attaatcacc ttcactttgc tatcaacatt attaatgtat tgccttaata agatgaaagg
     4021 atgatcaaca cctgctgaag atacatttag ctcaaaatct tcgttgtcac ggtcaagaga
     4081 attctcaata taacgactta attcaacgca gttagcaatt gtaacaccat tatcaccatc
     4141 aataaacaca ctaatattat tatcagtacc tatattaatt ccaactacaa acctatcgct
     4201 cccaaacaag cattcgtcag ctaactttga tatatgttct ttatttatca tttataaaaa
     4261 gaggggacta ttgtcccctt ctacattttc ctatcttaac cgttgtccga ccaggattcg
     4321 aacctggaca ggcagaatca aaatctgcag tgctgccgtt acaccatcgg acattcgggg
     4381 cgcaaagata cgtcattttt tttgattaca aatttttccc cggaaattat taaaatgtgt
     4441 taaattcaaa aagattaata aaatccatta agttaaattg tatattttcg catcgaattt
     4501 gtttagtgtt ttacaataat taactttagc aagctataag cttgactgga ggaaaatatt
     4561 tttacttgca tattcatttt tgaataaaaa atatctgaag ttattcaaaa tcagtagttt
     4621 gttgtagttt agcggtaaat ataaatcgga ttctttttaa aactttacag ggttaatatt
     4681 aatactaatg gaaaagttca aaaaacttaa taatttgttc gggtggattg tttttgcgat
     4741 tgcaaccaca gtttattttt taacacttga gccaactgcg agttggtggg actgtggaga
     4801 gtatatcgcc acagcttata agctacaggt aggtcatccc cccggagccc ctttgtttca
     4861 attgttaggt cgcttcttta ctcttttcgc ttttggaaac cttgagaatg ttgccttgat
     4921 gattaatata atgtcagcac tgtccagtag ttttactatc ctgtttctat tttggacaat
     4981 taccatgctg gccaaaaaga taatggtaaa gtctggaaat actcctccat tagctgaggg
     5041 ttgggttata ctgggagctg gtgtagttgg ttcattagcc tatactttta gtgattcatt
     5101 ttggttttca gcagttgaag gcgaggtgta tgctatgtcg tcattattta ctgctgttgt
     5161 tttttgggca atattgcgat gggaagaagt agcagatcat cgtaccggtt ttcgttggtt
     5221 acttttaatt tcttatataa ttggactttc cataggtgtt cacttgttaa acctacttgc
     5281 tatacctgca attgtatatg tatattacta caaaaaatac acatattcga ataaaggatt
     5341 cattgctgcc ggcataatat cacttgctat attgtttgta ataatgtatc tggttattcc
     5401 tgggattgtt gagtttgctg gaaaatttga acttttcttc gtaaacagta ttgggatgcc
     5461 atttaattcc ggaactataa tttatttctt aattattaca gttataattg ctggaggttt
     5521 gtattataca tatataaagc gtaaggttgt attaaacacg gttatacttg cttttttatt
     5581 catcttaatt ggctactctt cattttttat gattgttata agggctaatg caaaccctcc
     5641 aattaacgaa aatgatccaa aggatgctat tagcttgcta tcatatttga acagagagca
     5701 atatggttca tggcctatat ttcatggtca gtattttaac gcacctgttg ttgatcatgc
     5761 agatggtaat cctgtttata tgaaggatga gaagaaaggt aattatgtta taaaagaaga
     5821 tagaaaaggg acaattcctg tatatgatga gcgttttaca accatattcc cacgaatgtg
     5881 gagtaataca aaacctgccc acaaaacgct ttatgaacat tttggagaca tagaagggag
     5941 accaataagt gtttctgatg gtaaaggtgg tactaaagtg ttatatcgcc caacatttgg
     6001 tgagaactta aaatttttct ttacctacca gtttaacttc atgtatatga gatatttctt
     6061 atggaatttt gccggaaggc agaataacat tgagagccag ggtgaaattc aacatggaaa
     6121 ttggattagt ggtataaatt ttattgactc atggcgaatt ggtgatcaaa gcaatctacc
     6181 atctagcatg aaaaatcctg ctaggactca gttttatttt ctcccactca ttttaggatt
     6241 aattggtttt ttctttcagc ttaacaggag taaaaaggat acatgggttg ttgcgctaat
     6301 atttataatg acgggtcttg ctatcataat ttatcttaac caaactcctt tgcaacccag
     6361 agaacgtgat tatgcatatg ccgggtcttt ttatgctttt gcgatttgga ttggacttgg
     6421 agttctcggc ctatataatg ccttgcaaaa gaaaatgggt aataagttgt tggcagtttc
     6481 aattgtgtct atcgcaagtt tgatgcttgt gcccggaatt atggcagaac aaggctggga
     6541 tggtcatgac cgttcaggta aatatgctgc tgctgacttt gctaaaatgt atttagcttc
     6601 gtgcgagcca aatgctatat tgtttacaaa tggagataac gatactttcc cgctatggta
     6661 tgtgcaggaa gttgagaatt tcagaactga tgtgagagtt gtgaactata tgctttcatc
     6721 aggcgattgg tatgtaagcc agatgggtag gaaagtttat gactcagaaa gattacctct
     6781 aactataaat caggatttct ataaaaagga gggtggttat gttcccgtct ttgagcgact
     6841 agaccaggcc gaacttatcg atgctataag atttattgaa gatgataaca agggaacacg
     6901 agtaccactt caaagtggtg aatggattga ttatatgcct gcgaaaagat taacactagt
     6961 aattgataaa gaagctgtta tagcctctgg cactgtgcca attgaagatt ctgcaaagat
     7021 tgttgatagt atggagtgga ctatcaggca aggtggactt tttagaaatg accttatgtt
     7081 acttgacctg gttgctacaa ataactggga aagacctatt tattttgcaa acccaaatag
     7141 tcatagtaaa gtgttaaatg tcgacaagta ttgtcacctt gaaggtgtgg tttatcgttt
     7201 taaaccaaca attgcgactg attatataca aaaaattggc ggtgttaacg ctgaccgtac
     7261 atatgaagta cttatggatg aaaatgttag atggggaaga ttaaatgaag aagatgttat
     7321 tgttgataga gaaagtgcca gaaatgctgg gatggcaaag cagaattatg tacgacttgc
     7381 tcaagcatta ttaaaagaac ataaatacga ttctgtaatt gaggttcttg atagaggaat
     7441 tgagttattc ccaaataata agttcccgtt tgattacttt atgatttcat gggctgattt
     7501 ttattataag gcaggcgcaa ttgaaaaagc agatgaactt gttaatcaaa ttgaagatcg
     7561 atataatgag gatttagcat attataattc gttaaacggt gattttacta atgaatatca
     7621 ggaagatatt caggaagcaa ttgcagttat gcaaagatta attcaggtca ctagccaaaa
     7681 taatcaggaa gaacgttcga aggagttaga aaaaacattt tatgagcatc tatctacttt
     7741 taatttgaga tagtctcagg gacttcgatt tgatcaggta ttaggtgcaa ttttcgaaaa
     7801 ttaaaccaat aataatagct ataataatca atatgctatt ttgttactat ctcttttgca
     7861 gcttgaaaag cagcgtcgat acccgatgca tctttccctc cggccgtcgc taagaatggt
     7921 tgaccaccac caccaccctt aatataagga gagatttctt tgataatatt gcctgcgtta
     7981 tatccttttg ttaaaatcaa tttatcagaa atagaaacaa taaggtttac tttttcattg
     8041 ttgtgagtag acagtacggc aacaatattt tcaccactta accgcaattt ttgggcgaga
     8101 ttttttgcct gattaatatc aagttttgtt ttttcactta taaatctgat atctgagatt
     8161 acctttgcat tgtttagtaa tgtattggaa atttccaatg cttgttggtt tttgagatta
     8221 tctatttctt tctgtaaact atgatgttca gctattatat ttttaacagc gagcaatgta
     8281 tgtggttggt tcttaaacag gtcttttatc gaatttaatt tattaacctg accataaaca
     8341 tattcttctg atttttctcc tgctactgct tcaatacgac gaacacctgc tgcaatacca
     8401 ctctcggaaa taatcttgaa aaaaccaatg ttgccggttg aatctacatg ggttccacca
     8461 cataattcga cggataaatt agggtcaaat gtaacaaccc taactttttc gccatacttt
     8521 tcaccaaaaa gtgctaaagc acctatttca agtgctttgc tcattggaat atcttgttta
     8581 atatca
//
LOCUS       DASCQP010000341         4379 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001227009, whole genome shotgun sequence.
ACCESSION   DASCQP010000341 DASCQP010000000
VERSION     DASCQP010000341.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4379)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4379)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4379
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001227009"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..414)
                     /locus_tag="QF480_05835"
     CDS             complement(<1..414)
                     /locus_tag="QF480_05835"
                     /inference="COORDINATES: protein motif:HMM:NF012274.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyceraldehyde 3-phosphate dehydrogenase
                     NAD-binding domain-containing protein"
                     /protein_id="HJN06116.1"
                     /translation="MTKIKIGINGFGRIGRNVFKIAHERENMEVIGINDLTDTKTLAH
                     LLKYDSTQGKFNGTDSYDDNNLIVDGKAIRVTAERLPIDISWAETPDVVVESTGIFRM
                     RESNKGGYGDHLKNGAKKVILTVPAKDEIDRMIVIG"
     gene            585..>4379
                     /locus_tag="QF480_05840"
     CDS             585..>4379
                     /locus_tag="QF480_05840"
                     /inference="COORDINATES: protein motif:HMM:NF013491.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PEP/pyruvate-binding domain-containing protein"
                     /protein_id="HJN06117.1"
                     /translation="MTEKFKSKALEANLAETRYKNIQIEPDYLQFINLSKNYFGINKR
                     ANDCIIEFQHPFSNRKFVTEELRNILLTDYWFYIALDDPDIAFSTPVKLLEKLLTEEK
                     SVDYHVMIIRTLLEFIQKLAKETKDHSKLIEECLTSIQNVLENDSLSLIKASKYFNKY
                     LKDLVDLKQFKKQILVTNLKIYKQNIEYWENSTKIETWIKQHKEILAVDQSKIKHKLG
                     KPWFTSLRKKLSNISDWKTLVSELPDYDMMADTFASSISLFSNFIEKFYYSFYLLQLE
                     GMNSHKERVIWNLNSMLKQTMDEVDENKLIVFIDQIFSFCYGLRKEHTSSVLDILLTL
                     GKKIIDIDDSSEYKLTHYFEDKLIDFGFESPGIVYVNEDWQLSANKNHIKNIGVWLEL
                     IEYSQLEMEKLLSVLIVNLQLGGIFLNDTDLFQREITKILNSNIVPFYKNVKQLTRIF
                     PVYFNEIGAEGEIRKVTTSMDEIAYRKDKLIHFLRKQVHTESNNTLIVLTRQIFNFWY
                     DGNQKAIKDILPTNVYDSIDQKSEYYAPVHKMVVRMCKISKSNPTELLDLSDNEYEIL
                     LEQLNQDNNRDIERLRDIRLLYAFLKEKYSFETVDITNVLKRYSYIKDSDIEEFKLAL
                     DENDFGTSLKLIYSFMSQLKEVIFNPKPSQAWENIYHKRHIAIGIPSMYGTYREPKFE
                     ALGLTFRLENVATRLMEKVVNQINLNYISAKTMKDIYVILDYFREGLELDGITNQSLN
                     SNLLMLKYSLRSQSLSFDQYINIFKFLAEDVKRTIIKYFLKSYEIPLRKVIPQLFDKE
                     HKLSAEDEVNLVNSMSEKFYRDVIAEAFLMQPLDNFITKILESLREMADNLSPTMIKE
                     VMSYNSDLVIARLGKQNPQVDNQLFLGSKAYHLKNLRLAGFPIPPGFVLTTEVFRRHK
                     AIFEHPELKNEFYDLIRQHLSLVERAAKKEFGNPKNPLLLSVRSGTAISMPGAMDTLL
                     NVGMNDKITLSLSKKRGFEWSAWDSYRRLLQSWGMAFGLIRDEFDNVMEVYKAKYNVD
                     QKTEFSPKAMRDVAMAYKKTIENKGIKFEEDVFSQLIITINLVFESWSSERAKVYREH
                     LEIADEWGTAVVIQQMIFGNMHHTSGTGVVFTQDPTKEKQGVSLYGDFTFRSQGEDIV
                     AGLVKPLPIGRHQKSSSNNNNSLQETCPDIYSRLHEMSVELTEDLGYSPQEIEFTFES
                     EKSEDLYILQIRDQDMATHQSVDVFKASIEKMKLVGRGIGVGGGAMNGRVAFDNSDIT
                     KLK"
BASE COUNT         1541 a          709 c          758 g         1371 t
ORIGIN      
        1 gccaataaca atcatacggt caatctcatc ttttgcagga actgttaata tcactttttt
       61 agcaccattt ttaagatgat ctccatagcc acctttattg ctttccctca tcctaaaaat
      121 gcctgttgac tcaactacaa catcaggtgt ttcagcccag ctaatatcaa tcggtaatct
      181 ttctgcagtt acccttatag ccttgccatc aacaatcaag ttgttatcat cataagaatc
      241 tgttccatta aatttacctt gagtagaatc atattttaac aaatgagcaa gagtttttgt
      301 gtcggttaaa tcgtttatcc caataacttc catattttcc ctttcatgtg ctattttaaa
      361 cacattgcgt ccaatccgtc caaatccgtt tatcccaatt ttaattttag tcatattagt
      421 agtctttatt tatttcttaa tagtgtaggt catctctcac ttcaaattaa agaattatct
      481 aataattatt atccttactt ttgtatgata tacctcgttt gttttattat gaatgaacaa
      541 aattaaacta aaataatcta tcattttctg aattttatat taatatgaca gaaaaattta
      601 aatcaaaagc tcttgaagcc aacctggcag aaacaagata taagaacatt caaatagagc
      661 ctgattatct gcaatttata aatctgtcaa aaaactattt cgggattaat aaacgtgcaa
      721 acgattgcat tattgaattc cagcaccctt tctcaaatag aaaatttgtt accgaagagc
      781 tacgaaatat actattaacc gattattggt tctacatagc tctcgatgat cctgatatag
      841 ctttttcaac accagttaaa cttcttgaga agctcctaac ggaggaaaaa agtgttgatt
      901 atcatgtaat gattattaga acccttcttg agtttattca gaaactggcg aaagaaacga
      961 aagatcattc aaaattgatt gaggaatgtt tgacatcaat tcaaaatgta ctggaaaatg
     1021 actcgttaag tttgataaaa gcatcaaagt atttcaacaa atatttgaaa gatcttgttg
     1081 atttaaaaca attcaaaaaa caaatacttg ttactaattt aaaaatttat aaacaaaata
     1141 ttgaatattg ggagaacagc actaaaattg agacttggat taaacaacac aaagagatac
     1201 ttgcagttga ccagtctaaa ataaaacata aattaggcaa gccatggttt actagcttga
     1261 gaaaaaaact aagtaatatt tcagattgga aaaccttagt tagcgagtta cctgactatg
     1321 atatgatggc tgatacgttt gcatcatcaa tttcactgtt cagtaatttc atcgagaagt
     1381 tctattatag tttctaccta ctacagctcg aaggtatgaa ttcacataag gaacgtgtta
     1441 tctggaactt aaacagcatg ctcaagcaaa ctatggatga ggtggatgaa aataaactaa
     1501 tcgttttcat agatcagatt tttagctttt gctacggatt gagaaaggaa cacacatctt
     1561 cagtactcga catacttctt acgttaggca aaaaaataat tgatattgat gattcttccg
     1621 aatataaact tactcattat tttgaagata aactaatcga ttttggattt gaatctcctg
     1681 gtattgtgta tgttaacgag gattggcagc tttcagccaa taaaaaccat attaaaaata
     1741 ttggggtttg gctagaatta attgaatatt cacaacttga aatggagaaa ctactttctg
     1801 tgctaattgt gaaccttcaa ttaggaggga tttttcttaa cgacacagat ctgtttcaga
     1861 gggaaataac taaaattcta aattctaaca tcgtcccttt ctataaaaat gtgaaacagc
     1921 ttactcgtat cttcccagtt tattttaacg aaattggagc agagggtgaa atacggaaag
     1981 taacaacatc tatggatgaa atagcctaca gaaaagacaa actaatacat tttctgcgta
     2041 agcaggtgca cacagaaagt aataacactt taattgtcct tacaaggcaa atatttaact
     2101 tctggtacga tggcaaccaa aaggcgatta aggatatact tcctacaaat gtttacgatt
     2161 ccatagatca aaaaagtgaa tattatgctc ctgttcataa gatggtagtt aggatgtgca
     2221 aaattagtaa aagcaatcct actgaattac ttgatttaag cgataacgaa tatgagattt
     2281 tactagaaca gctaaatcag gacaataatc gcgatattga acgtctgcgt gatataagat
     2341 tactttatgc atttcttaag gaaaaatatt catttgaaac tgtagatata actaatgtac
     2401 tgaaacgata ttcctacatt aaagactctg atattgaaga gtttaaattg gccttagatg
     2461 aaaatgattt tggaacatct ctaaaattaa tatatagttt tatgagccaa ttgaaggaag
     2521 ttatttttaa tccgaaacct agccaggcat gggaaaatat ttaccacaaa agacatatcg
     2581 caattgggat tccttcaatg tatggaacct atcgtgaacc aaagttcgaa gcacttggtt
     2641 taacattcag acttgagaat gttgctaccc ggctaatgga aaaagttgta aatcagataa
     2701 accttaatta tatatcggcc aaaacaatga aagatatata tgttattctt gattatttca
     2761 gggaaggtct tgaattggat ggtataacaa atcagagttt gaactcgaac ttgttaatgt
     2821 taaagtacag tcttcgctca caaagtttat cttttgatca atacataaac atttttaagt
     2881 ttttagctga agatgtgaaa cgcacaataa taaagtactt cttaaaatct tacgaaattc
     2941 ctttgcgaaa agtaatcccg caactttttg acaaagaaca caaactaagt gcagaagatg
     3001 aagttaatct ggttaatagt atgtcggaga aattctatcg agatgttatt gcagaagcct
     3061 ttcttatgca accattggac aattttatta ctaagatact tgaatctctt agagaaatgg
     3121 ctgataatct gagtcctaca atgataaaag aagtgatgtc gtataattca gatttggtca
     3181 ttgctcggtt aggaaaacaa aaccctcagg ttgataatca gctgttttta ggctccaaag
     3241 cttaccatct taaaaattta agattggcag gatttccaat tcctccagga tttgtactta
     3301 ctactgaggt tttcagaagg cataaggcta tattcgaaca tcctgaattg aaaaatgaat
     3361 tctacgatct aattcgtcag catctttcgt tggttgaaag agcagcaaag aaagaatttg
     3421 gtaatcccaa aaacccactt cttctttcag taaggtcagg aacagctatt tctatgccag
     3481 gggctatgga cactcttctt aatgttggta tgaacgacaa aataactctt agcctgagta
     3541 aaaaacgtgg atttgaatgg tcagcgtggg attcatatcg acgcttgctt caaagttggg
     3601 gaatggcttt tggtttaata agagacgagt ttgacaatgt catggaagtt tacaaagcaa
     3661 aatacaatgt tgatcaaaaa actgagttca gtccaaaggc aatgcgtgat gtagccatgg
     3721 cttataagaa aacaatcgaa aataaaggaa ttaagtttga ggaagatgta tttagccaac
     3781 ttattattac aataaatctt gtttttgaat catggtcttc agaaagagca aaagtatacc
     3841 gtgaacatct tgaaatagct gatgagtggg gaactgcagt agttattcag caaatgatat
     3901 tcggtaatat gcatcacacc tctggtactg gggttgtatt tacacaggat cccacgaaag
     3961 aaaaacaagg agtaagtctt tatggtgact ttacatttcg tagtcaaggg gaagacatag
     4021 tggcaggact tgttaaacca ctgcctatag gcaggcacca aaaatcatca tctaacaata
     4081 ataattcatt acaagaaact tgccctgaca tttattccag attgcatgaa atgtctgttg
     4141 aactaactga agaccttggt tacagtccgc aggaaataga gttcactttt gaatctgaaa
     4201 agtcagaaga cctttatata cttcaaatca gggatcaaga tatggcaact caccaatcgg
     4261 tagatgtttt taaagcaagt atcgaaaaaa tgaaattagt aggaagaggc attggtgttg
     4321 gcggtggcgc tatgaacggc cgtgtggcat ttgataatag tgatattaca aaattgaag
//
LOCUS       DASCQP010000342         2890 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001234000, whole genome shotgun sequence.
ACCESSION   DASCQP010000342 DASCQP010000000
VERSION     DASCQP010000342.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2890)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2890)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2890
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001234000"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..535)
                     /locus_tag="QF480_05845"
     CDS             complement(<1..535)
                     /locus_tag="QF480_05845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009598440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HJN06118.1"
                     /translation="MKNIDTFDFTNKKVIVRVDFNVPLNENFEITDDTRIRAAIPTIK
                     KILSSGGSVILMSHLGRPKNGPENKFSLKHLIPGLSKKLGVKVQFADDCIGEQAIELS
                     KKLKPEQVLLLENLRFHKEETLGDEHFAEKLAHLADVYMNDAFGTAHRAHASTAIIAK
                     FFPENKMFGYVMKNELIN"
     gene            complement(692..2377)
                     /locus_tag="QF480_05850"
     CDS             complement(692..2377)
                     /locus_tag="QF480_05850"
                     /inference="COORDINATES: protein motif:HMM:NF008453.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJN06119.1"
                     /translation="MLQISNLSIEFNSGSSENRAVDSVNLKLDKGMALGLVGESGSGK
                     SVTALAIMQLLPPQANILTGEINFDNVNLIELNKESIRKLRGNNISMIFQEPATALNP
                     VIRCGKQVAESIMQHQRENKKTAYQQVISLFNRVNLPRPEDIYKSYPHQLSGGQKQRI
                     MIAMAIANKPDLLIADEPTTALDVTIQKEIITLLKSLREEYGMGLLFISHDLGVISEI
                     VDEVAVMYKGRIVESGKIKQVFEHPKHPYTIGLLACRPPIDKRIDRLPEIDDYLNSEV
                     DNTKTPPNTQSRINLHKQIYSKLPILKVQNLEKKYSLSKNLFGKTTSYLSAVDDISFD
                     VFPGETLGLVGESGCGKTTLGRSILRLIEPDNGSIFFNNKDIISLNTRSLKKQRKNIN
                     IVFQDPYSSLNPRISIGNAIIEPMKVHKLYGNNKQRKEKVIGLLQKVGLKKEHFNRYP
                     HEFSGGQRQRIVIARTLALNPKFIICDEAVSALDVSIQAKVLNLLNDLKKEFGFTYIF
                     ISHDLSVVRFMSDRIMVMKDGNIIEIGDADTIYNSPKSEYTKKLIASEPAMLN"
     gene            2456..>2890
                     /gene="prs"
                     /locus_tag="QF480_05855"
     CDS             2456..>2890
                     /gene="prs"
                     /locus_tag="QF480_05855"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006282474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004749 - ribose phosphate diphosphokinase
                     activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate diphosphokinase"
                     /protein_id="HJN06120.1"
                     /translation="MSDPKVSIFSGSKTRYLAEKIADSYGIELGKSIVTSFSDGELQT
                     SYEENIRGRDVFIIQSTFPPGDNLLELLMMIDAAKRASARKIIAVIPYFGYARQDRKD
                     KPRVSIASKLIANLLTTAGVDRVITLDLHADQIQGFFDVPVDN"
BASE COUNT          890 a          522 c          474 g         1004 t
ORIGIN      
        1 tgttaatgag ctcatttttc atcacgtagc caaacatttt gttttcagga aagaacttag
       61 caataatagc tgttgaggca tgggcacggt gagctgtacc aaaggcatca ttcatataaa
      121 catcggcaag atgagctagc ttctcagcaa aatgctcatc acctaaagtt tcctctttgt
      181 ggaatcgcaa gttttcaagt aatagtactt gctcaggttt caatttcttt gatagttcta
      241 tagcttgttc cccaatacaa tcatcagcaa attgcacttt aacacccaat ttctttgata
      301 agccgggtat aagatgtttt aacgagaatt tgttttctgg tccgttctta ggcctaccca
      361 aatgggacat aagaatcacg gatccaccag aacttaatat tttttttatt gtaggaattg
      421 cagcccgtat tcttgtgtca tctgtaattt caaagttctc attaagaggc acattgaaat
      481 caactcttac gatgaccttt ttatttgtaa aatcgaatgt gtcaatgttt ttcatctaat
      541 tttttctttc gggtttagaa tagtttttac caaaattata acaaaaatta aagcagaatc
      601 aattaatagg aaaaaggata aagaagttac tgtttttaac aaaactgcct cgtaaaaaca
      661 atttttattg ataaattcta atcactgaat tttaatttaa cattgctggt tcggaggcaa
      721 ttaatttctt agtatattca gattttgggc tattataaat tgtatcagca tcaccaatct
      781 ctataatatt tccatctttc ataaccatta ttctatcgct cataaatcgc acaacactta
      841 agtcgtgaga aataaatatg tatgtgaaac caaactcttt tttaagatca tttagcaaat
      901 taagaacttt tgcctgaatt gatacatcaa gtgcagaaac agcctcatca cagataataa
      961 attttggatt aagagcaaga gttctggcaa ttacgatcct ttgtctttgt ccacccgaaa
     1021 actcatgagg atatcgattg aaatgttctt ttttcaatcc aactttttga agcagaccaa
     1081 ttactttttc ttttcgttgt ttattattcc cataaagttt atgaactttc ataggttcta
     1141 taatagcatt tcctatactg atacgtggat ttagtgatga atatgggtcc tgaaacacga
     1201 tattaatatt tttgcgctgt tttttcagag accttgtatt gagtgaaatt atgtccttat
     1261 tattaaagaa tattgatcca ttatcaggct caatgagtct aagaatactt cgcccaagtg
     1321 ttgtttttcc gcagcccgat tcaccaacta atccaagagt ttctcccgga aatacatcaa
     1381 aacttatatc atcaactgca gataaataac tagtcgtttt accaaacaag ttttttgaca
     1441 aactatattt cttttccagg ttttgaactt ttaatatggg tagcttactg tatatctgtt
     1501 tatgtaagtt tattctgctt tgtgtattag gtggggtttt tgtgttatca acttcactat
     1561 ttaaataatc atcaatttca ggaagacgat cgatgcgctt gtcaattggc ggtcggcatg
     1621 cgagtaaccc tatcgtataa ggatgtttgg gatgctcaaa aacttgcttg attttgccag
     1681 actctacaat ccggccctta tacataactg ccacctcatc aacaatttca cttattactc
     1741 ctaaatcgtg actgataaat aacaatccca tcccatattc ctctctaaga cttttcaaaa
     1801 gtgtaattat ctctttttga atggtaacat ccagggcagt tgttggttca tcagcaataa
     1861 gtaaatcagg tttgttagca atggccattg caatcattat ccgttgcttt tgtccgcctg
     1921 ataattgatg tgggtaactc ttataaatat cctcaggtct tgggagatta actctattaa
     1981 ataaactgat aacttgttga tatgcagtct tcttattctc cctttgatgt tgcatgatac
     2041 tttcagctac ctgtttccca catctaataa caggatttaa ggcagttgcc ggctcttgaa
     2101 aaatcatcga aatattattt ccccgaagct ttcgtatact ttccttattg agctcaatta
     2161 aatttacatt gtcaaaattt atttctccag ttaaaatgtt tgcctgcgga ggaagcaatt
     2221 gcattatagc taatgctgta actgattttc ctgaacccga ctcacccaca agtccaagag
     2281 ccattccttt atccaatttc aggtttacac tatcaacagc cctattttct gatgaacctg
     2341 aattaaattc tatgcttaga tttgatattt gtagcaattc ggaatatttt aagtgagaat
     2401 caggaaatta atattatttt tgcagcgatt tttcaaaacc agtaaaacta atcaaatgtc
     2461 tgatccaaaa gtaagtattt ttagtggtag caaaacgcgt tatcttgctg aaaaaatagc
     2521 tgatagctat ggtatagaac ttggaaaatc aattgttact agtttttcag atggcgagct
     2581 tcaaacatct tatgaagaaa atatcagagg aagagatgta tttattattc agtcaacatt
     2641 cccaccaggt gataatttac tggaactgtt aatgatgatt gatgctgcaa agcgggcatc
     2701 tgcaaggaaa attatagcag tgattccata cttcggttac gccaggcaag accgaaaaga
     2761 taaaccaagg gtatcgatag catcaaaatt gatcgcaaat ctgttaacaa cagcaggtgt
     2821 tgacagggtt attactcttg atttacacgc tgatcaaatt caggggtttt ttgatgtacc
     2881 tgttgataat
//
LOCUS       DASCQP010000343         2581 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001237514, whole genome shotgun sequence.
ACCESSION   DASCQP010000343 DASCQP010000000
VERSION     DASCQP010000343.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2581)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2581)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2581
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001237514"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            239..2134
                     /locus_tag="QF480_05860"
     CDS             239..2134
                     /locus_tag="QF480_05860"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN06121.1"
                     /translation="MLIYQKLKEWVTIIVLILFGQIAIGQTTIQEIIDEANKSAATEI
                     PLPLASSWQTGSLVDVYPWNVGLYFTLDEQVDLISNGHHFLPTIGLAAPLEWYTLSND
                     YYSALEQFKTWGLPLTIVCTQWEQELYQDSSFFNLPFVDNPNLWDTSGVIIPSLSPMA
                     PDTTWYQIGKKWSDSTELSYIQSIYSDPPLVIMLSNNEALRLTWINANRSQRFVDSYG
                     LTASDSLKRAVFQEGWSTKYIALQNGMRDNFSEVDWRNNVKFVGYGVNDVGHFARWDG
                     WIEYSLYAPGRIGTEHNFWDGGSPSYYLNPWEESLSDFNVYSPQVEFMNLKMILDETR
                     LDKPEYWSEFSVWDGYNTADTINPSQNKRVWYNSIGQTFSPERYKGWIQFGMWLIRPR
                     VVREFRGWAESREDVGIEYFDQILDAVDTVYSDSLLKRFWREGELVKNSLYTHPYQSN
                     VPPEYQTIDRWYLLDTDIDNLHPWTLATEIPVYALAREINSGPSDREWLIYAYAPQGE
                     VTNVTIKIPDGSGGYVKQITVDVPVEGAFYYESESTVDVNEESLVSNIELFPNPTSGF
                     INLNMGYVCNDVHIIIKDIIGNIIIEEHYEQSQIINMDASRLTAGIYVITLTTGNQNK
                     TMKLIKQ"
     gene            2226..>2581
                     /locus_tag="QF480_05865"
     CDS             2226..>2581
                     /locus_tag="QF480_05865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06122.1"
                     /translation="MKVKEEYYCTIWVKQGDKKTIQIIDQRSLPHEFIIEDFNTVDQV
                     VAAIKDMHVRGAGLIGATAGYGMYIAAIEALSSNSFDDHLYLAAKKLIATRPTAVNLT
                     WAVERQLSAIQKGNNN"
BASE COUNT          844 a          438 c          534 g          765 t
ORIGIN      
        1 ctacaggcct aatgaactgt tcagatttta gtagagaaag agaggggact tgcattgttg
       61 acgggttttg tcctcgtgta taaatgagcc ttattcctct ctttcgttct tctgattatt
      121 ttataaatat ataatattga aaacgaaata aggccagcag gtaacacgaa agtaaaaaac
      181 attaaaacgt tttttacttc aaccgttggc aaacataaat ccaatcaata ccactgatat
      241 gttaatatat caaaagttga aagaatgggt aacaataatt gttttgatac tctttggaca
      301 aatagccatt ggtcaaacta ctattcaaga aataatagat gaggcaaata aatcagcagc
      361 aactgagatt ccgctacctc tggcatctag ctggcaaacg ggaagtttag tagatgtcta
      421 tccatggaat gtcggattat attttacgct tgacgagcag gttgacctta tatcaaatgg
      481 acatcatttc ttacctacta tagggttggc agctcctttg gagtggtata ctttatcgaa
      541 cgactattat agtgctttag aacagttcaa gacctggggt ttgccattaa cgattgtttg
      601 cacacaatgg gagcaagagt tataccagga ttcatcattt tttaatttac catttgttga
      661 caaccctaat ctttgggata cctctggtgt gattattcct agcctctctc caatggcacc
      721 agatactacg tggtatcaaa tagggaaaaa atggtccgac tcaactgagt tatcgtacat
      781 tcaaagcata tattccgatc caccgctagt tataatgctt tcaaataatg aagctcttcg
      841 tttaacttgg atcaatgcaa atcggtcgca acgttttgta gacagctatg ggcttaccgc
      901 atcagacagc ttaaagagag cagtttttca ggaaggttgg tcaacaaagt atatagctct
      961 gcaaaatgga atgagggata acttttcaga agtagattgg cgaaacaatg tgaaatttgt
     1021 tggatacggt gtaaatgatg taggacattt tgcacgctgg gatggttgga tagaatactc
     1081 tctttatgca ccaggtcgaa ttggaacgga acacaacttc tgggatggag gctcaccttc
     1141 ttattatcta aacccctggg aagaatcact ttcggatttt aatgtttatt ccccacaagt
     1201 ggaattcatg aatcttaaga tgattttgga tgaaacacga ttggacaagc ctgagtactg
     1261 gtctgagttt tccgtttggg atggctataa tacagctgat acaattaatc catcgcagaa
     1321 taaaagagtg tggtataaca gtattggtca gacattttca cccgagagat acaaggggtg
     1381 gattcaattt ggaatgtggc taatcaggcc cagagtggtt agagaattta gaggatgggc
     1441 agaatcaagg gaggatgttg ggatagaata ttttgatcaa attctagacg cggtagatac
     1501 cgtttattca gattctctat taaaaagatt ttggagggaa ggggaattgg ttaaaaattc
     1561 actatacact cacccttatc aatcaaatgt tccaccagaa tatcaaacta ttgatcgatg
     1621 gtatttacta gataccgata tagataactt gcatccctgg accctggcaa ctgaaatacc
     1681 agtttatgca ttagcaaggg aaattaattc tggaccgtca gatcgtgagt ggttaatata
     1741 tgcatacgct ccgcaaggag aagttacaaa tgttaccatc aaaatacctg atggtagtgg
     1801 cggatatgtt aaacaaatca cagtggatgt tccggtggaa ggagcttttt attacgaatc
     1861 tgagtctact gttgacgtga acgaagagtc ccttgtatct aatattgaat tattcccgaa
     1921 ccctactagt ggatttatta atttgaacat gggttatgta tgtaatgatg tccatattat
     1981 tattaaagac atcattggta atattattat tgaggaacac tacgaacagt cacagataat
     2041 taatatggac gcttcccggt taactgcagg catttatgtc attaccttga caacaggaaa
     2101 tcaaaataaa accatgaagt taattaaaca gtaacatttg ccaacaaaaa gctatagcgc
     2161 attaaaacgc gccatagcca gggccgttat ataacatttt aatcattatc aaagcccgtt
     2221 caagcatgaa agtaaaagag gaatattatt gtacaatatg ggttaaacaa ggagataaaa
     2281 aaactattca aattattgat caacgaagct tgccgcacga gttcattatt gaggatttta
     2341 atactgttga ccaagtagta gcagcaatta aagacatgca tgttagggga gctggcttaa
     2401 taggagctac ggcaggttat ggtatgtata tagctgcaat agaggcatta tcgagcaatt
     2461 cttttgatga ccatttatat cttgcagcta agaaactaat agctaccaga cctaccgctg
     2521 tgaatcttac atgggcagtt gaaagacaat tatcagctat tcaaaaagga aataataatc
     2581 a
//
LOCUS       DASCQP010000344         3172 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001241487, whole genome shotgun sequence.
ACCESSION   DASCQP010000344 DASCQP010000000
VERSION     DASCQP010000344.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3172)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3172)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3172
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001241487"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..219
                     /locus_tag="QF480_05870"
     CDS             <1..219
                     /locus_tag="QF480_05870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06123.1"
                     /translation="FSITLGLGAKYWISDRVGIIVRGRLMIPMIFGGVGGYYGIGSGG
                     SGGGLTLNSYSSIVQGDFSGGLVFSLGK"
     gene            566..790
                     /locus_tag="QF480_05875"
     CDS             566..790
                     /locus_tag="QF480_05875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019539220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF433 domain-containing protein"
                     /protein_id="HJN06124.1"
                     /translation="MIQFNQYIEIDSEKRFGKPIIIGTRISVYDVLSLLSNGMSRKEI
                     IADYPELSESQINACLSFAANKEHRHLYAS"
     gene            787..1119
                     /locus_tag="QF480_05880"
     CDS             787..1119
                     /locus_tag="QF480_05880"
                     /inference="COORDINATES: protein motif:HMM:NF037832.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5615 family PIN-like protein"
                     /protein_id="HJN06125.1"
                     /translation="MKLLFDQNISFRLLKRIIDLYPDSKQVLELGLENSTDREIFDFA
                     QRNNYTIVTFDSDFFDLVTLYGFPPKIIWIRTGNTTTKNLELILKAKYELIELFIKEN
                     YGCLEIVD"
     gene            1112..1396
                     /locus_tag="QF480_05885"
     CDS             1112..1396
                     /locus_tag="QF480_05885"
                     /inference="COORDINATES: protein motif:HMM:NF013691.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HJN06126.1"
                     /translation="MIKNHKFLTTGQHNSITNDLPTRLYQHKAESETTKKTFAGKYNC
                     YYLVYYEHFDYIQDAIDYEKELKGWTRKKKVDLIEKFNPNWDFLNERIEE"
     gene            complement(1461..2780)
                     /locus_tag="QF480_05890"
     CDS             complement(1461..2780)
                     /locus_tag="QF480_05890"
                     /inference="COORDINATES: protein motif:HMM:NF033542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HJN06127.1"
                     /translation="MRKIRENAAGIDIGAKKVFVYIEGQKVKSFYTFTEDFDILCQYL
                     LKHNVKTVAMEATGVYWSILYEILEEAGIDTWLVAGRQTKQVPGRKTDVKDCQWIQEL
                     HSLGLLNRCFVAKDDVKELRSYNRLREDHIRSASMHVNHMQKALTEMNIRLKEVLSQI
                     HGISGMKIIEAILNGERNKTILLNMCDPRIIKNKKKEVLKSLNGRYTNTGIFALRQAF
                     DGYNFYQGQIKQCDKEIETIIHRMGNGGLNKNLSTKRKTIRHNKPEVDNLGANLIDIF
                     EGRDATIISGITDYSWMQLLSEIGTDLSRWPTEKHFSSWLGVAPGQHWSGKMNRNKKK
                     SGHPKAGQIFRQIAQGLLASKNIALGSFGRRIRSRKGPAKAVKAMARKLAVMYWRVMV
                     KGVDYAELGIKKYEEQLLAQKQKSVKRMAKELNLQLVNMQPIINSCH"
     gene            complement(2981..>3172)
                     /locus_tag="QF480_05895"
     CDS             complement(2981..>3172)
                     /locus_tag="QF480_05895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06128.1"
                     /translation="FGRFIEIAIRDPLITTPQLARANITHANKIKMNHFSYRSLPAHL
                     CHSEWLDPEKKEPRKLYDN"
BASE COUNT          988 a          586 c          526 g         1072 t
ORIGIN      
        1 ttctctatta cactaggcct tggtgctaaa tactggatat ctgatagagt tggtattata
       61 gtaagaggca gacttatgat accaatgatc tttggtggag ttggagggta ttatggtatt
      121 ggatctggtg gctccggtgg gggattaaca ttaaactctt attcttcgat tgtgcagggg
      181 gattttagtg gggggcttgt attctcatta gggaaatagc cagtttttcc tgtcatctcg
      241 accagaggga gagatcccat caaacaaaac actaagaaat ataccttcta gttttccaaa
      301 ataaaaggat ttctcatcgc aatcctgaaa tggattgctt tcttcgaaat gacaggaaag
      361 tttaaatcat atatatcaaa aatcgaggct cgttttgcta ataagagctt accggggctg
      421 gagacgcagt tgaagatggc tacaaactct cgtttcgttg agtacgcgaa atcccgatta
      481 ctatcgggac gcaccagaga gtgtcttata cctagaataa tagatacaaa ttaactaata
      541 ataaataatt gactattttt gtactgtgat acaattcaac caatacatag aaatagattc
      601 tgaaaagcga tttggaaaac caataattat tgggaccaga atatctgttt atgatgtatt
      661 atctttgctt tctaacggaa tgtctagaaa agaaataatt gcggactatc ctgaattgtc
      721 cgaatctcaa ataaatgcat gcttgtcttt tgccgcaaat aaagaacaca gacatttata
      781 tgcatcatga aactactctt cgaccagaat atttcattta gactccttaa acgaattatt
      841 gatttatacc cagattccaa gcaagtttta gaattaggac ttgaaaattc aacagatcgt
      901 gaaatatttg atttcgcgca aagaaacaac tacacaatag ttacttttga ctctgatttc
      961 tttgatttag ttacattata tggttttcct cccaaaatta tttggatcag gactggaaat
     1021 acaacaacaa agaatctgga attaatactc aaagccaaat acgaattaat agaattattt
     1081 ataaaagaga attacggttg tcttgaaata gttgattaaa aaccacaaat tcttaacaac
     1141 aggacaacac aactccatta caaatgatct acctactcgt ctataccagc ataaagctga
     1201 gtccgaaaca accaaaaaga catttgctgg taaatacaat tgctattacc tagtttatta
     1261 tgagcatttt gattatattc aggatgctat agattatgag aaagagctaa aagggtggac
     1321 taggaaaaag aaggttgatt tgattgagaa atttaatcca aactgggatt ttttgaatga
     1381 gaggattgag gaataagata tgaagttcaa tttgactaat tgtacgagtg gagattcttc
     1441 atcccgactg agcgggatta ctaatgacaa ctatttataa ttggttgcat attaactagt
     1501 tgtaagttta attcctttgc catgcgtttt actgattttt gtttttgagc taataattgc
     1561 tcttcgtatt tcttaatgcc taattctgca taatcaactc ccttaaccat taccctccaa
     1621 tacattactg caagcttacg agccatagcc tttactgctt ttgcaggtcc tttccttgat
     1681 cttattcttc gcccaaatga acctaatgcg atatttttac ttgctaatag accttgggca
     1741 atctgtctaa agatttgacc tgctttcgga tgacctgatt ttttcttgtt tcgattcatt
     1801 ttaccagacc aatgttgccc tggagcaaca ccaagccaac ttgaaaaatg tttttcagta
     1861 ggccatctgc ttaagtctgt cccaatttcg gaaagtaatt gcatccatga ataatctgtt
     1921 attcctgata ttattgtggc atccctacct tcaaaaatat caattagatt tgctccaaga
     1981 ttatctacct caggtttgtt gtgccttata gttttccttt tagttgagag gtttttattt
     2041 aatccaccat tacccattct atgtataatt gtttctattt ctttgtcgca ttgttttatt
     2101 tgcccctgat agaaattgta cccatcaaat gcctgacgta aagcaaatat accagtatta
     2161 gtatatcttc cgttcaaaga tttaagaact tcctttttct tattcttaat aattcttgga
     2221 tcacacatat ttaaaaggat ggttttgtta cgttcaccat ttaatatagc ttctattatt
     2281 ttcataccac ttattccatg aatttggctt aatacttctt ttagcctgat attcatttct
     2341 gtaagtgctt tttgcatatg gttaacatgc attgatgctg aacgaatatg atcttctcgt
     2401 aatcgattgt aactcctaag ttctttaaca tcatctttgg caacaaaaca acggtttaaa
     2461 agtccaagac tatgtaattc ttgtatccac tgacaatctt taacgtcagt tttcctgcca
     2521 ggaacttgtt tggtctgacg accagctaca agccaggtat caatacctgc ttcttccaat
     2581 atttcataca aaatactcca atacacacca gttgcttcca ttgcaacagt ctttacatta
     2641 tgcttaagta gatattgaca aagaatatca aaatcttcag tgaaagtgta aaaactttta
     2701 actttctgac cctcaatata aacaaatact ttttttgccc caatatcaat accagctgca
     2761 ttctctctaa tttttctcat agtacacatc ttttaagtta atgcttaaca cccaaaagac
     2821 cattcatcat tgatatgcta ctaatcgggc atttcctgaa attatggaaa gcaccatact
     2881 tcatggctca aacttttgga accatactca gaaacaggta ttaaaacact aatcaaacga
     2941 cggccaaact gtgttaagca ccacaaatat caggaacttt tcaattgtca tatagcttcc
     3001 tgggctcctt tttttcgggg tctaaccact cagaatgaca aagatgagca ggcaggcttc
     3061 gatatgagaa gtggttcatt tttattttgt tggcatgtgt tatgttagca cgcgctagtt
     3121 ggggagttgt tattaaagga tctctgatgg ctatttcaat aaatcgtccg aa
//
LOCUS       DASCQP010000345         5207 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001246823, whole genome shotgun sequence.
ACCESSION   DASCQP010000345 DASCQP010000000
VERSION     DASCQP010000345.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 5207)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5207)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5207
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001246823"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..905
                     /locus_tag="QF480_05900"
     CDS             <1..905
                     /locus_tag="QF480_05900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010259870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cyclodeaminase/cyclohydrolase family protein"
                     /protein_id="HJN06129.1"
                     /translation="ITPVHIAYDEVWKKAEARGIRVTGSELVGLIPLEAMLEAGRYFL
                     RKQKRSVGVDNDELLRIAIKSMGLDDLKPFDPKERIIEYLLESHDKKLVDMSLKAFAN
                     ETASESPAPGGGSIAAYAGVLGVSLGTMVANLSAHKRGWDDRWEEFSDWASQGQKYKD
                     ELLRLVDEDTSAFNKIMDAFGFPNKTEEEKEERKVAIENASKYAMEIPFKVMETAYDS
                     MKVMKAMADFGNPNSVSDAGVGALCALAAVEGAFLNVKINAAGIDDKIFTANLIKTSE
                     EIELKAKDCRNEIIETVEKKIKEL"
     gene            911..1543
                     /locus_tag="QF480_05905"
     CDS             911..1543
                     /locus_tag="QF480_05905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013613536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HJN06130.1"
                     /translation="MDNFTTILLYFTSFLTLMNPMGIMPVFLTMTSELSKRERRRTAI
                     KAVITAGLVLILFAILGEYLFNFFGISVAGLQVVGGVIFFIMGYDMLNAKLSPMKIRS
                     EDVEKYVEDISITPLGIPMIAGPGAITNAIILMGESESYSNSALVIISIILVLFTLMF
                     VLIGAVGITKLLGDKGNKIMMKLMGLIVMVIAVEFFFAGITPYIQAIINI"
     gene            1620..1808
                     /gene="rpmG"
                     /locus_tag="QF480_05910"
     CDS             1620..1808
                     /gene="rpmG"
                     /locus_tag="QF480_05910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012573149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HJN06131.1"
                     /translation="MAKKSKDARIQVILECTEHKNSGKPGTSRYITTKNKKNTPDRLE
                     LKKYNPILKKMTVHREIK"
     gene            1818..1964
                     /locus_tag="QF480_05915"
     CDS             1818..1964
                     /locus_tag="QF480_05915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005468156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4295 domain-containing protein"
                     /protein_id="HJN06132.1"
                     /translation="MAKKVVASLQSSGKEFAKVIKMSKSDKTGAYTFKEEIIPTDEVK
                     AYFS"
     gene            2078..3031
                     /gene="ftsY"
                     /locus_tag="QF480_05920"
     CDS             2078..3031
                     /gene="ftsY"
                     /locus_tag="QF480_05920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004374871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005047 - signal recognition particle
                     binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HJN06133.1"
                     /translation="MGLFNIFSKKQQKENLNKGLENTRKSVFSKISKAVAGKSKVDEE
                     VLDNLEEALVMSDVGVHTTLKIIERIEERVAREKYLGTDELNMILRSEIEKLLLENNT
                     GDDEDFELPTESKPYVIMVVGVNGVGKTTTIGKLAYNFSAVGKKVILGAADTFRAAAV
                     KQLSIWADRVGVPIVSQGMGADPASVAYDTVKSAISQDADVVIIDTAGRLHNKVNLMN
                     ELSKISRVVQKLIPDAPHEILLILDASTGQNAIEQARQFIAATEVNAIALTKLDGTAK
                     GGVVIGVSDQFKIPVKYIGVGEKMEDLQIFNRSSFVESLFA"
     gene            3077..4363
                     /gene="rimO"
                     /locus_tag="QF480_05925"
     CDS             3077..4363
                     /gene="rimO"
                     /locus_tag="QF480_05925"
                     /EC_number="2.8.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004312446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008172 - S-methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0018339 -
                     peptidyl-L-beta-methylthioaspartic acid biosynthetic
                     process from peptidyl-aspartic acid [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     RimO"
                     /protein_id="HJN06134.1"
                     /translation="MKKTINIVTLGCSKNLVDSEVLMAQLNNDYLVVHDSNDKADIII
                     INTCGFIVDAKEESVDTILRAVRSKIKGDTEKILVTGCLSERYKEDLAGEIKEVDGFF
                     GVNELPNVLNALDINFKKELIGERVLTTPKHYAYVKISEGCSRNCSFCAIPLIRGKHV
                     SKPKGEIINEVKFLAKQGVKEIILIAQDLTWYGLDIYKKRELPDLLNRISEIEGIQWI
                     RLHYTYPANFPTGLLNVMHNNSKVCLYLDIPLQHISSRILRSMKRGLGGHKTIDLIKK
                     IKRTIPNVALRTTLIVGYPGETEEEFEQLLDFVMESKFDRLGVFIYSPEEDTSAFTLK
                     DNIPDEIKESRRDRLMMLQQEISYELNKQKVGSAMKVIIDSKEGDKYIGRTEFDSPEV
                     DNEVIIKAPKNSLKIGEYYNVIISGSDFFDLYGEVI"
     gene            4920..>5207
                     /locus_tag="QF480_05930"
     CDS             4920..>5207
                     /locus_tag="QF480_05930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06135.1"
                     /translation="MKTKLFIIYMLVVFVTSAQEANVPSDSIPDGAYFDNQGSMSVSG
                     YYKNNLKTGNWITYFKTGQINIVEHYELGKKNGLYLKISKRGYIVEQAEYSN"
BASE COUNT         1785 a          729 c         1068 g         1625 t
ORIGIN      
        1 gtatcactcc tgtgcatatt gcttatgatg aagtttggaa aaaagccgag gcacgtggta
       61 ttagagttac aggatctgaa ttggttggac ttatccctct tgaagctatg cttgaagcag
      121 gaagatattt tttacgaaag cagaaaagat cagttggtgt agataatgat gagctcctta
      181 gaatagcaat taaatcaatg ggactggacg acttaaaacc atttgatcca aaggagagga
      241 taattgaata ccttcttgaa agtcatgata agaagcttgt cgatatgtca ttaaaggcgt
      301 ttgccaacga aacagcttct gaatcaccag cacctggtgg cggttcaata gctgcttatg
      361 caggagtttt gggtgtatct ctaggtacta tggttgcaaa tcttagtgca cataaaagag
      421 gatgggacga tcgttgggaa gagttttctg attgggcttc tcaaggccaa aaatataaag
      481 atgagttgtt gagacttgtt gatgaagata caagcgcatt caataaaatt atggatgctt
      541 tcggatttcc aaataaaact gaagaggaaa aagaagaaag aaaagtagca attgagaatg
      601 catcgaaata tgctatggaa attccattca aggtaatgga aacagcatat gattcaatga
      661 aagtaatgaa ggctatggct gattttggaa atcccaactc agtatcagat gcaggagttg
      721 gagcattatg tgccctggct gctgttgaag gagcttttct taacgttaag ataaatgcag
      781 ctggaataga tgataaaatt tttactgcta atttgataaa gacgagtgaa gaaatagaac
      841 tcaaagcaaa agattgtagg aacgaaataa ttgaaactgt tgaaaagaaa atcaaagaat
      901 tataattatt ttggataact tcacaaccat actgttatat tttacttcgt ttctcacttt
      961 gatgaatcca atgggtatta tgcctgtttt tttaacgatg acttctgagt tatcaaaacg
     1021 tgagagaagg agaactgcaa ttaaggctgt aataactgca ggtcttgtac taatactatt
     1081 tgccatccta ggggaatact tgtttaattt cttcgggatt tcagtagctg gattacaggt
     1141 tgttggtggt gtaattttct ttataatggg ttatgacatg cttaatgcaa agcttagccc
     1201 aatgaaaata agatctgaag atgttgaaaa atatgttgaa gatatttcca tcacaccttt
     1261 aggaatacct atgattgctg ggcctggagc gatcacgaat gctattattc ttatgggcga
     1321 aagtgaaagc tattctaact cagcactcgt tattatttcc attattttag tgctgtttac
     1381 tttgatgttc gtattaattg gagctgtggg tattactaag ttgctgggag acaagggtaa
     1441 caagataatg atgaagttga tgggactaat agtaatggtg attgcagttg agttcttttt
     1501 tgcaggaata acgccttaca ttcaagcaat tatcaatatt taaaaatatt taataaaaga
     1561 ttggtttata tttataaagt tggtattttt gccgaccgaa atttaaagcg aacacagaaa
     1621 tggctaagaa gagtaaagac gcaaggatac aggtaatact tgaatgtacc gagcataaaa
     1681 atagtgggaa accaggaacc tcaaggtata ttaccacaaa aaataagaaa aatactcctg
     1741 acagactcga gttaaaaaaa tataacccga tcttgaagaa aatgactgtt cacagagaaa
     1801 ttaaataata aagaactatg gctaagaaag ttgttgcatc actgcaatca tccggtaaag
     1861 agtttgcaaa agtgattaag atgagcaaat ctgataaaac aggtgcttat acttttaaag
     1921 aagaaattat tcctacagat gaggttaaag cttattttag ttaaaaatta agcttagtat
     1981 cgataaaata ttaatcttac tgaaagcttt ttcctgcgtt gtagggagaa gcttttttgt
     2041 tgaatacaaa ttgaaccagc agtaaagagt aaaaattatg gggttgttta atatattttc
     2101 gaaaaaacag caaaaagaaa atctgaataa aggcttagag aatacgcgta aaagtgtttt
     2161 tagcaaaatt tctaaggctg ttgccggtaa atcgaaggta gatgaggaag ttcttgacaa
     2221 tcttgaagaa gctctagtta tgtcagatgt tggagtacac acaacattga aaattatcga
     2281 aagaattgaa gagcgtgttg ctcgcgaaaa gtacctgggt acagatgaac taaatatgat
     2341 tctgaggagt gaaatagaaa aattattatt ggaaaataat acaggggatg atgaggactt
     2401 tgagcttcca acagagagta aaccttatgt gataatggta gttggtgtta acggtgttgg
     2461 aaaaactact acaatcggta agctggcata taactttagt gctgttggca aaaaagtaat
     2521 actaggagca gctgatactt ttcgagctgc ggcggttaaa caattaagta tttgggcaga
     2581 tcgtgtagga gtaccaatag tgagccaggg tatgggtgct gatccagcat ctgtagcata
     2641 tgatacagtg aaatcagcaa tttctcagga tgcagatgtt gtaattattg ataccgcagg
     2701 tcgccttcat aacaaagtta atctcatgaa tgagctttcg aagattagtc gtgtagtaca
     2761 aaaactcatt ccagatgctc ctcatgaaat cctcctcata cttgacgcat ccacaggcca
     2821 aaatgccatt gaacaggcca ggcaatttat tgcagctact gaagtaaatg ctattgcatt
     2881 aactaaacta gatggtaccg ccaaaggtgg cgttgtaatt ggtgtgtcag atcaatttaa
     2941 aattcctgtt aaatatattg gtgttggaga aaagatggaa gatcttcaga tctttaatcg
     3001 tagttcattt gttgaaagtt tatttgctta atctttaatg cattaaactg caagatcatt
     3061 caaataagac actactttga agaaaacaat aaacatagtt acgcttggct gttcaaaaaa
     3121 tttagttgac tctgaagtgt taatggcaca attgaacaac gattatttag ttgttcacga
     3181 ttccaatgat aaggctgata ttataattat aaacacttgt ggtttcattg ttgacgcaaa
     3241 agaagagtcg gttgacacaa tattgagagc agtacgttca aaaataaaag gggatactga
     3301 aaaaatactg gtaacgggct gtttatctga aaggtataaa gaggatctag ccggtgagat
     3361 aaaggaagtg gatggctttt ttggggttaa tgagcttcca aatgtactta acgcactaga
     3421 tataaatttc aagaaagaac tgattggaga aagagtatta acaactccaa agcactatgc
     3481 ctatgtgaaa atatcagaag gctgtagtag aaattgctcc ttttgtgcta ttccacttat
     3541 tagaggaaaa catgtttcaa aacccaaagg tgaaattatt aatgaagtaa agtttttagc
     3601 taaacaagga gttaaggaga ttattttaat tgctcaggat ttaacttggt atggactcga
     3661 tatttacaaa aaacgtgaac tccctgattt gttaaatagg atttctgaga ttgaaggaat
     3721 tcaatggatc agacttcatt atacttatcc tgctaatttt cctaccggac tgcttaatgt
     3781 aatgcataat aatagcaaag tgtgtttgta tttggatata cctttacaac atattagcag
     3841 ccgtattttg agatcgatga aaaggggttt gggaggtcac aaaactatcg accttataaa
     3901 gaaaataaag aggaccatac caaatgtggc attgcgtact acattaattg ttggttatcc
     3961 aggcgagaca gaagaggagt ttgaacaatt attggatttt gtaatggaaa gcaaatttga
     4021 ccgtcttggt gtttttattt attctccaga agaggatacc tcagctttta ccttaaaaga
     4081 taatattcct gatgaaatta aggaatctcg ccgtgataga cttatgatgt tacaacagga
     4141 aatatcttat gaactaaata aacaaaaagt tggtagtgca atgaaagtca tcatcgacag
     4201 taaagaaggc gataagtata ttggacgtac ggaattcgat tctcctgaag tggataatga
     4261 agtgattatt aaggcaccaa agaatagcct taaaattggg gagtactaca atgttattat
     4321 ttctgggtct gacttttttg atctgtacgg ggaggtcata taactaacta tttgccatta
     4381 tctataaatt tatgatcaaa caattaactc gttagggtta ctttattgat gtgtctagct
     4441 agttattttg ttaaattatg catcacagta ctaatgttat tcttttacta cccatcggtt
     4501 aaagtaaaaa accgatacat ttctaacatt tgattagtat tattcactac gataacggat
     4561 acattttgtt agtttccgat tttaagttta tgaaatcggg taattaattt gtgtgtttat
     4621 tttgaagtta tttctaatag gttttcaatc aattaattaa aaaatttggc ataggaattg
     4681 ctttgtaagg gctattacaa tataagcagt aggcctaatt gtgattgaaa aattggtttt
     4741 ggttgattca ggtcggaaga gtccttctct ccggcctgtt ctttttttga accgttacta
     4801 ccccgattgt ataccctcaa tcatctttta ataatatcaa tattaagatt aggacttcaa
     4861 tcctttattg ataattaatc tttattacaa tacctttgca ccaaatcatc ttaattatta
     4921 tgaagactaa actttttatt atttatatgc tcgtagtatt tgtaacgagt gcccaagaag
     4981 cgaatgttcc atcagattca ataccagatg gtgcgtattt tgataatcag gggagtatgt
     5041 cagtatcagg ttattataaa aataatctta aaaccggaaa ctggataact tacttcaaga
     5101 ctggacaaat caatattgtt gaacactatg agttagggaa aaagaatggt ctatatttaa
     5161 aaataagtaa acgaggttac attgttgaac aggctgaata ttctaat
//
LOCUS       DASCQP010000346         4780 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001248300, whole genome shotgun sequence.
ACCESSION   DASCQP010000346 DASCQP010000000
VERSION     DASCQP010000346.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4780)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4780)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4780
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001248300"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..298
                     /locus_tag="QF480_05935"
     CDS             <1..298
                     /locus_tag="QF480_05935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007484752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="family 20 glycosylhydrolase"
                     /protein_id="HJN06136.1"
                     /translation="EPLAIGGYTTLEKVYSYNPVPDTLSEDETIHILGTQGNVWTEYM
                     ETPDYVEYMVLPRLAALSEVNWSSKKDWELFQKRIQEHFTIYEKLGYNYCDHPF"
     gene            309..3278
                     /locus_tag="QF480_05940"
     CDS             309..3278
                     /locus_tag="QF480_05940"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016798 - hydrolase activity, acting on
                     glycosyl bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GH92 family glycosyl hydrolase"
                     /protein_id="HJN06137.1"
                     /translation="MIVTILKSRHIARYAIIMLVASTILAGCDSTTKEPADYVVPFIG
                     TGGHGHTYPGATLPFGMVQLSPDTRKDSWDGCSGYHYSDDYILGFSHTHLSGTGVGDY
                     GDIRFIPTVGELQFTPGTSENPNSGYGSKFSHDNENATAGYYSVKLDNGIDVELTATK
                     RAGFHNYRFPRSKKSHVLIDLIESVVSEKIIEAEIKIISDHEVLGYRRTKAWSANQRV
                     YFYASFSEPFASHGIVVQGEYWQNKTSATGDSLIAVLNFDTSESEPILIKVGISAVDY
                     NGAMENCKTEIPDWDFSKTKNNAKAIWNEKLSKVNVTDDNIDKKTIFYTSLYHTMLAP
                     NLYSDIDFRYRAHNDKIVRDNSFEMHTVFSLWDTFRTLHPLFTIIEQKRTNHLINSML
                     DMYKYDSLLPVWELAANETNCMIGYHSIPVIVDAWVKGIRDFDAELALKAMLQTANAD
                     QFDLEYFKSKGYIPSDKEGESVSKTLEYAYDDWCIARLAKGLGDSAMFKLFTERAQYY
                     KNIFDKQTGFFRGKSNGCFVKPFDATQVNFMLTEANTWQYNFFVPQDINTHIELLGGD
                     DSYEAKLDTLFNTTTDVSGRHQSDITGLIGQYAHGNEPSHNMAYLYNYIGKPWKTQKL
                     IHQISSELYSDQPDGLSGNEDCGQMSAWYVMSSLGFYPVTPGSEIYVLGVPLFDELAI
                     NLENNNVFTVKALHRSDNNIYVQKVMYNGMDYTRSYITHNMIMDGGELVFEMGKNPNY
                     DYGFKISDRPKQEITDFIITPVPYFEATSKTFIDEMEISIGDIQNDSKIIFSVDKSNE
                     DYTQPLNISNTTKLTAIARSNGINSFQENAEFIKIPSGQKIAIKTPYSNQYIAGGDKA
                     LINTIRGGHDFKTGNWQGYYGTDFSAVVDYGKIVNISKAGIGFLQDENSWIFMPLSVT
                     FEGSVDGENFIMIGVVDNNISQKKSGAIIKDFVVENIDMHLRYLKITGKATGNCPDWH
                     KGAGNPAWIFADEIWVE"
     gene            3357..>4780
                     /gene="dnaG"
                     /locus_tag="QF480_05945"
     CDS             3357..>4780
                     /gene="dnaG"
                     /locus_tag="QF480_05945"
                     /inference="COORDINATES: protein motif:HMM:TIGR01391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003896 - DNA primase activity [Evidence
                     IEA];
                     GO_process: GO:0006269 - DNA replication, synthesis of RNA
                     primer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HJN06138.1"
                     /translation="MINPATIQSIFETARVEEVIGDFVSLKKRGVNFLGLCPFHNEKT
                     PSFSVSPTKGIFKCFGCGKAGNVVGFVMEHEHYSYPEALRYLAKRYGIEIEEEEVTPE
                     MQQQLDEKESMLALNTFVTQYFTKNLFEKEEGKSIGLSYLKEREFREATIEKFEIGYA
                     IDQWEDYSQHAIKNGYKKEPLISTGLSIEKDDKLLDRFRGRVIFPIHNLTGRVIGFGG
                     RILSSEKSKAKYLNSPESDIYNKSKVLYGIYFARNAMVKNNKCYLVEGYTDVISLHQA
                     GIENVVSSSGTSLTVEQIKLISRYTPNITILYDGDPAGIKASFRGIDLILEQGMNVKI
                     VLFPEGEDPDSFVRNNSTSETEDLINNTAVDFIKFKTSLLKTETANDPSGKAALIKDI
                     VLTISLIPDGISRSVYIKECSILLDVREQTLMNELNKLLRQKFRKQTNIPPEVISLED
                     IKDKRLAQIDIDPLDLSYLESDLI"
BASE COUNT         1642 a          752 c          955 g         1431 t
ORIGIN      
        1 agaaccactt gcaattggtg ggtatacaac actagaaaag gtatactctt acaatccggt
       61 tccggatact ttaagcgaag atgaaacaat tcatatactt ggtacacaag gcaatgtatg
      121 gaccgaatat atggaaacgc ctgattatgt agaatacatg gtattgcccc gattggctgc
      181 actaagtgag gtaaactggt caagtaaaaa ggactgggaa ttatttcaaa agcgaattca
      241 agagcacttt acgatttatg aaaagttagg ttataattat tgtgaccacc cgttttaaat
      301 atattaatat gatagttact attctgaaat caagacatat tgcacgttac gcaattatta
      361 tgttagttgc atcaactata cttgcaggat gtgattcaac aactaaagaa ccagcagatt
      421 atgtagttcc ttttattggt actggaggac atggacatac ttaccccgga gcaacactgc
      481 catttggaat ggtgcagctt agccccgata ctcggaagga tagttgggat ggctgctcag
      541 gttaccatta ttcagatgat tatattcttg gatttagcca tactcattta agcggaacag
      601 gagttggaga ttatggcgat attaggttta ttcctacggt tggtgaactg cagtttaccc
      661 ctggcacttc agaaaatcca aactctggat acggctcaaa gtttagccat gataatgaga
      721 atgctactgc cggttattat agtgtaaaat tagataatgg tattgatgta gaattaacgg
      781 ctacaaaacg agcagggttt cataattatc gattcccaag atcaaaaaaa tctcatgtgt
      841 tgattgattt gattgaaagt gtggttagtg agaaaataat agaagcggaa ataaagataa
      901 ttagcgatca tgaagtactt ggttatcgaa gaacaaaagc atggtctgca aatcaaaggg
      961 tctactttta tgcatcattt tcagaacctt ttgcttcaca cggaattgtg gtacaaggag
     1021 aatattggca aaataaaaca tcagctactg gtgatagttt gatcgcggtt ctaaattttg
     1081 ataccagcga aagtgaacca atcttaatta aagttggtat atctgctgtt gactacaatg
     1141 gagctatgga gaattgtaaa actgaaatac ctgattggga ttttagcaaa acgaagaata
     1201 atgctaaagc tatctggaat gaaaaattaa gcaaagtaaa tgtcacagat gataatattg
     1261 ataaaaagac aattttttat acatcgctat atcacacaat gttagcacca aatttgtatt
     1321 cggacataga cttccgttat cgcgctcaca atgataaaat agttagggac aattcctttg
     1381 aaatgcatac cgtattttca ttatgggata catttagaac cctgcatcca ctgtttacaa
     1441 taattgaaca gaaacgtaca aaccacttaa ttaattcaat gctcgacatg tataaatatg
     1501 acagcctttt accggtttgg gaacttgctg ctaacgaaac aaactgtatg ataggttacc
     1561 attcaatacc tgtaattgta gatgcctggg tgaaaggaat aagagatttt gatgctgaac
     1621 ttgctctaaa agcaatgctg caaacagcaa atgctgacca gtttgattta gaatatttca
     1681 agtccaaagg gtatattcct tcagataaag aaggtgagtc agtctctaag actcttgaat
     1741 atgcctacga cgactggtgt attgcacgtt tggcaaaggg tttgggtgat agtgctatgt
     1801 ttaaactttt tacagaaaga gctcaatatt ataaaaacat atttgacaag caaaccggct
     1861 tttttagagg gaaaagtaat ggttgttttg taaagccatt cgatgctaca caggtaaact
     1921 ttatgcttac agaagcaaat acttggcaat ataatttctt tgttcctcaa gatattaata
     1981 cgcatattga gcttcttggc ggtgatgaca gttacgaagc taaactcgat actttgttta
     2041 atacaaccac tgatgtgtca ggcaggcacc aatcagatat tacaggactg attgggcaat
     2101 acgcacatgg caacgagcca agtcataaca tggcttacct ttataactat atagggaaac
     2161 catggaaaac acaaaaactg atacatcaaa taagtagtga actttattct gatcagcctg
     2221 atggattgag tggtaatgag gattgtggtc agatgtctgc atggtatgtt atgagctcat
     2281 tgggattcta tccagttaca cctgggagcg agatatatgt acttggggtt ccgctttttg
     2341 atgagttagc gataaatctt gaaaacaaca atgtttttac cgtgaaagct ttgcatcgta
     2401 gcgataataa catttatgta caaaaagtaa tgtacaatgg aatggattat acacgttcat
     2461 atattactca caatatgata atggatggcg gagaacttgt atttgagatg ggtaaaaatc
     2521 caaactatga ctatggattt aaaatttctg acagacctaa gcaagaaata accgatttta
     2581 tcataactcc ggttccgtat tttgaagcta catctaaaac cttcatagat gaaatggaaa
     2641 tttcaattgg agatatacag aatgactcaa agatcatttt ttctgttgac aagagtaatg
     2701 aggactatac acaaccttta aatattagta acacaacaaa acttacagca attgccagaa
     2761 gtaatggaat taatagtttt caagaaaatg cggagtttat taaaatacct tccggccaaa
     2821 agatagcaat caagacgcct tatagcaatc aatatattgc aggaggtgat aaagctctta
     2881 taaatacaat taggggtggt catgatttta aaaccggtaa ttggcaaggt tattacggaa
     2941 ctgacttttc tgctgtcgtt gattatggaa aaattgtaaa tatttcaaaa gctggtattg
     3001 gatttctgca agatgaaaat tcatggatat ttatgccgtt atctgttaca tttgaaggat
     3061 cggttgatgg tgaaaatttc attatgatag gtgtagttga taacaatata agtcagaaga
     3121 aatctggagc tattattaag gattttgttg ttgaaaacat tgatatgcat ttaagatatt
     3181 taaagattac aggtaaagca acaggcaatt gccctgactg gcataaaggc gcaggcaatc
     3241 ccgcatggat ttttgccgac gagatttggg ttgaataatc gtaggttgac atcgacctta
     3301 tggagacata acaattttaa taaaaatagc tttaattttg cgtaaaatat gaagacttga
     3361 taaatcctgc cactatacaa agtatattcg aaactgcacg agttgaagag gtcattggcg
     3421 actttgtatc tttaaaaaag cgcggagtta actttcttgg attatgtcct tttcataatg
     3481 aaaaaacacc ttctttcagt gtatcaccta caaaaggaat attcaaatgt tttggctgtg
     3541 gtaaggccgg caatgtagtt gggtttgtga tggaacacga acattactcc tatcctgaag
     3601 cacttcgcta tctcgcaaaa agatatggaa ttgagattga agaggaagaa gtaacacccg
     3661 aaatgcagca gcaattagat gaaaaagaaa gcatgcttgc gttaaacact tttgttacac
     3721 aatactttac gaaaaatctt tttgagaaag aagagggaaa atcaataggg cttagctatt
     3781 tgaaggaaag agaatttagg gaggcaacaa ttgaaaagtt tgagattgga tatgcaatag
     3841 accaatggga ggattattcg caacatgcta taaaaaatgg ttataaaaaa gaacctctta
     3901 tttcaacagg acttagcatt gaaaaagatg ataaactgct tgaccgtttc cggggaagag
     3961 taatttttcc tattcataat ctaacaggca gagttattgg ttttggaggg agaattcttt
     4021 cttctgagaa atcaaaagca aaatatctta actcgcctga atctgatatt tacaataaaa
     4081 gcaaggtact ttatggcatt tatttcgctc gcaatgccat ggttaaaaat aacaagtgct
     4141 atctggttga aggttatacc gacgtcattt ctttacatca ggctggtatt gaaaatgttg
     4201 tatcatcttc tggcacctct ttaactgttg agcaaataaa gctgattagc aggtacactc
     4261 caaacatcac tatactttat gatggtgatc cggcgggaat taaagcctca tttcgtggta
     4321 ttgatttgat actggaacaa ggcatgaatg tgaagattgt gttatttcct gaaggagaag
     4381 atcctgattc tttcgtcaga aacaatagta ccagcgaaac agaagatctt attaataaca
     4441 cagcagttga ttttataaag ttcaaaacct ctttgctaaa aaccgaaact gctaatgatc
     4501 cttccggaaa agcagcactt attaaagata ttgttcttac aatatcacta attcctgatg
     4561 gaataagtcg ttctgtttat attaaagagt gtagtatact tcttgatgtt cgagaacaaa
     4621 cactcatgaa tgagttaaat aaactgctca gacaaaagtt cagaaaacaa accaacatac
     4681 ctcccgaggt aatatctcta gaagatataa aagacaaaag gcttgctcaa attgatattg
     4741 atccacttga cttaagttat ctggaaagtg atttgataag
//
LOCUS       DASCQP010000347         2098 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001251970, whole genome shotgun sequence.
ACCESSION   DASCQP010000347 DASCQP010000000
VERSION     DASCQP010000347.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2098)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2098)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2098
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001251970"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2098)
                     /locus_tag="QF480_05950"
     CDS             complement(<1..>2098)
                     /locus_tag="QF480_05950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013444535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HJN06139.1"
                     /translation="ILITLTTGYYVALAITAYGVTNLFSEKLAKLNGSLDNIINIAIT
                     VIVVVFFLAKEWMPLGAQNSLMANLLFVIAIVATVLGALSAVVFFYSRILRWCLNNKW
                     KFLTVPIFIVAFGITSWQGFNNLFGFMPEFIKKSSIYKNLDISLPGIGKEFMPSLDEG
                     SFLLMPTTMPHSGIEENIEVIRILDKRVNAIPEVENVVGKWGRVNSALDPAPTSMFEN
                     LINYKSEYILDESGRRMRFKVDGDGAFILTDSSVYNPAIDDFRVIDKESLTIDKNGEY
                     FRQWREEIKSPDDIWNEIISQSSIPGLTSAPKLQPIQTRLVMLQTGMRAPMGIKVFGP
                     DLASIEKVGFELEKLLKQVEGVQPMAVFADRVVGKPYLEMEIDRDAIARYGLSVKNLQ
                     DVLSSAIGGMQLTTTVEGRERFPVRLRYARDYRDNSEDLKKILIPTPSGTQIPLGELM
                     TITYTRGPQMIKSENTFLVGYVIFDKKDGYAEVDVVENAQEYLDKKLETGEFELPAGV
                     SYVFTGNYENQIRATKRLMIVIPISLIIIFLILYFQFRSVTSTTLIFTGIIVALSGGF
                     IMLWLYGQPWFLNGNVAGMNLRDLFQVHTINLSVAVWVGFIALFGVATDDGVLISTYI
                     KQLQDKHKPGNVKEVRALVLEAGKKRVRPAIMTTATTIIALLPVLTSTGKGADIMIPM
                     AIPLFGGMTIEVLTIFV"
BASE COUNT          674 a          451 c          323 g          650 t
ORIGIN      
        1 ctacgaatat ggttaatacc tcaatcgtca tacctccaaa taaaggaatg gccattggta
       61 tcataatgtc tgctcctttt cctgtagaag ttaatactgg caatagcgca attatggtag
      121 ttgcagtggt cataattgcg ggacgaaccc ttttctttcc agcctcaagg actaatgctc
      181 tcacctcttt tacattacct ggtttgtgct tatcctgcaa ctgttttatg tatgtactta
      241 tcagtacacc atcatcagtt gcaactccga aaagagcaat gaagccaacc caaactgcaa
      301 cacttaaatt aatagtatgc acctggaaca aatctctaag attcatacca gcaacattac
      361 cattcaaaaa ccaaggctga ccataaagcc aaagcataat aaatcctccc gataacgcca
      421 caattatacc tgtaaaaatc agtgttgtag atgtaacaga ccgaaattga aagtaaagta
      481 tcagaaaaat tattatcaaa gagattggaa ttacaatcat cagcctctta gtggccctta
      541 tctgattttc ataattaccg gtaaatacat aactaactcc agcaggtaac tcaaattcac
      601 ctgtttctag ttttttatcg agatattctt gtgcattttc aaccacatct acttcggcat
      661 atccatcttt cttatcaaaa ataacataac ccacaaggaa ggtattttca cttttaatca
      721 tttggggacc acgtgtatag gtaatagtca ttaattctcc taaaggtatt tgtgtacccg
      781 atggagttgg aattagtatc ttttttaaat cttcagaatt atccctgtaa tcccttgcat
      841 accttaaacg aacaggaaag cgctcacgtc cttcaacagt agttgttaat tgcattccac
      901 caatagcact actgagtaca tcctgtaggt ttttaaccga taaaccatac cgcgcaattg
      961 cgtccctgtc aatttccatt tcaagatatg gcttacctac tactctatct gcaaacacag
     1021 ccataggttg tacaccttca acttgtttta aaagtttttc caattcgaag ccaactttct
     1081 caatacttgc caaatcgggt ccaaacacct ttatccccat aggtgccctc atacctgttt
     1141 gaagcattac cagacgagtt tgaataggtt gcaacttagg tgcagatgtt aaacctggaa
     1201 tactggattg gctgattatt tcgttccaaa tatcatccgg cgactttatt tcttcgcgcc
     1261 attgcctgaa atactctccg ttcttatcaa tagtaaggga ttctttatca atcacacgaa
     1321 aatcatctat tgccggatta taaacactac tgtcagttaa aataaaagct ccatctccat
     1381 ctactttaaa gcgcattcta cgtcctgatt catcaagtat atattctgat ttataattga
     1441 ttaggttttc aaacatggat gttggtgcag gatcaagagc agagtttaca cgaccccatt
     1501 tgcctactac gttctccact tcgggaatag cattaactct tttatcaaga atacgaatta
     1561 cttcaatatt ttcttcaatt ccagaatgtg gcatagtagt gggcatcagc aaaaaagaac
     1621 cttcatctaa agaaggcata aactctttcc caatacccgg tagtgatatg tctagatttt
     1681 tatatatact tgattttttg atgaattcag gcatgaaacc aaacaggttg ttgaaacctt
     1741 gccagctagt tattccaaat gctacaatga agattggaac agtcagaaat ttccatttgt
     1801 tattcaaaca ccaccgtaaa attcttgagt aaaagaacac tacagcagat aaagcaccta
     1861 atacagttgc aacaattgct attacaaata ataagtttgc cattagagaa ttttgagcac
     1921 ccaacggcat ccattctttt gcaagaaaaa atacgacaac tattactgtg atagcaatat
     1981 ttataatgtt atctaatgac ccattcaact tggctaactt ttcagagaac aaattggtta
     2041 cgccatacgc tgttatagcc agagcaacat aataaccagt ggttagagta attaatat
//
LOCUS       DASCQP010000348         2250 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001263264, whole genome shotgun sequence.
ACCESSION   DASCQP010000348 DASCQP010000000
VERSION     DASCQP010000348.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2250)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2250)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2250
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001263264"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(90..1142)
                     /locus_tag="QF480_05955"
     CDS             complement(90..1142)
                     /locus_tag="QF480_05955"
                     /inference="COORDINATES: protein motif:HMM:NF024777.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LamG-like jellyroll fold domain-containing
                     protein"
                     /protein_id="HJN06140.1"
                     /translation="MKFYRAVTFVLLFIHGLTIDAQNGLVAHWNFEELVADTIYDISQ
                     NANHGTNYGGSLVPGILGNALSFDGIDAYARIPKDGKPPPNIFSTLFKGSISVWFKAI
                     NIPLTYGISLILYYGADENCDFFDAANKGLIIELGHSPIYMASRAIYYTVWKDGCTFP
                     SSCFDSFKPVSINEWHHYVVVVGLDFNTGYLDGVEMTGRRYSFGDPSYSQFFNDALVH
                     EKMWLGRGYWGNTTQYFEGSIDELRIYDRALTSAEVFELYQNPTSIYDNTKNSPEINI
                     FPNPAKEILHFDLSDLDDQLLTIKLTDTNGKVVLIEEFYSNDKELYIGDLPEGLYIVH
                     FTGTKKTYYGKVVISY"
     gene            complement(1316..>2250)
                     /locus_tag="QF480_05960"
     CDS             complement(1316..>2250)
                     /locus_tag="QF480_05960"
                     /inference="COORDINATES: protein motif:HMM:NF012894.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HJN06141.1"
                     /translation="NLGDSINTTKDEMTPFLHADGKTLFFASNGHPGLGGYDLFISRQ
                     DELGRWSLASNVGYPTNSRFNDINIFSSIDGSQSWISSDREGGAGAMDIYVFENYQEI
                     LPKKIMYVEGVVIDKVTKIPLKAEVQITNLGTSEIINTTVSDSVTGNFLIVIFPGVDY
                     AFTITKKGYLFFSENINLKDSIGVESIKKIFELSPFAKGNQLIMNNVFFEFNKYELLP
                     SSSIELNKLVELLDQHPTSEIEIIGHTDSIGSADYNMTLSMHRAKSVLNYLISNGIDS
                     ERLAYNAMGQSQPVAPNSTEQGRAKNRRTEIVIK"
BASE COUNT          734 a          417 c          355 g          744 t
ORIGIN      
        1 tattctttta ggttaacaaa aagcctgtca ggaatatcct gataggcttt ttttgatagt
       61 aaaacagcgg ttgggggcta tttggtatat taatatgaaa tcactacttt tccatagtat
      121 gtctttttag tacctgtaaa atgaacaata taaagccctt caggaagatc tcctatgtaa
      181 agctctttat catttgaata aaattcttca ataagaacaa ccttcccatt tgtatctgtt
      241 agttttatag tcagtagttg atcatctaaa tctgacaaat caaaatgcaa gatttctttg
      301 gcaggattag gaaaaatatt tatttcggga gagttcttcg tattatcata tattgaagtt
      361 gggttttgat ataattcaaa tacttcagca cttgtaagtg ctctgtcata gattcttaat
      421 tcatcaatac taccttcaaa atattgtgtt gtattacccc agtatcctct tccaagccac
      481 attttttcat gtacaagcgc atcattaaaa aattgcgaat atgaaggatc tccaaaacta
      541 tatcttcggc ctgtcatttc aaccccatca agatatccag tattaaagtc aaggcctaca
      601 acaacaacat aatgatgcca ttcattaata gatacaggct tgaaggaatc aaagcaactc
      661 gaaggaaatg tgcaaccgtc tttccagact gtgtaatata tagcccgtga tgccatgtat
      721 attggactgt gccccaattc tataattaaa cctttgttag ctgcatcaaa aaaatcacaa
      781 ttttcatcag caccataata tagtattagt gagattccat aagtaagtgg gatattaata
      841 gctttaaacc atacagaaat agagcctttg aacaacgtgg aaaaaatatt tgggggaggt
      901 ttcccatctt tgggaattct tgcataagca tcgattccat caaatgataa tgcattacca
      961 agtatacctg gtactaagga tcctccgtaa ttagtaccgt gatttgcatt ttggctgata
     1021 tcataaattg tatcagctac taattcctca aagttccaat gtgctactaa accgttttgt
     1081 gcatcaatgg ttaatccatg aataaacaac aaaacgaaag ttactgctct ataaaatttc
     1141 ataattcctc atttttatta gtttacattg atagtcgtga atattgtaaa tcctgacatt
     1201 aatgttaaac actcatagat acaatacata atgaggaatt taacgcatcg gttccgggtt
     1261 ctggatttgt atcaggtaaa tgatagttag aaattttagc tgagagccaa atctattatt
     1321 ttataacaat ctcagtcctt cgattttttg ctctaccctg ttcggtacta ttaggtgcaa
     1381 caggttgaga ttggcccatt gcattatatg caagccgctc actatcaatc ccattagaaa
     1441 taagataatt gagaacagat ttagccctgt gcattgatag tgtcatgttg tagtccgcac
     1501 ttccaatact gtcagtatgt cctataattt cgatttctga agtagggtgt tgatccagca
     1561 attcaacaag tttatttaat tcgatggacg aacttggtag taactcatat ttattaaatt
     1621 caaaaaatac attattcata atcagctggt tacctttagc gaaaggagat aactcaaata
     1681 tctttttaat tgattctact ccaattgaat ccttgaggtt tatgttctca gagaaaaaca
     1741 aataaccttt ttttgttatt gtaaatgcat aatcaacacc cgggaaaatc acaatcagga
     1801 aattaccggt aacagaatca gaaacagttg tatttatgat ctcagaagta ccaaggttag
     1861 tgatctgaac ctctgccttt aatggtattt tggttacctt atcaataacc actccttcaa
     1921 catacataat ctttttaggt agtatttcct gataattctc aaagacataa atatccatgg
     1981 ctcctgctcc tccctcacgg tcacttgata tccaactctg cgatccgtcg atgcttgaga
     2041 aaatatttat atcattaaat ctagaattag taggataacc aacgttactt gccaatgacc
     2101 atcgtcctag ctcatcttgt cttgaaataa ataaatcata acccccaagt cccgggtgac
     2161 catttgaagc aaaaaacaaa gttttaccat cagcatgaag aaatggtgtc atctcatctt
     2221 ttgtagtatt gatactatca ccaaggttaa
//
LOCUS       DASCQP010000349         2029 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001270222, whole genome shotgun sequence.
ACCESSION   DASCQP010000349 DASCQP010000000
VERSION     DASCQP010000349.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2029)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2029)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2029
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001270222"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            204..1490
                     /locus_tag="QF480_05965"
     CDS             204..1490
                     /locus_tag="QF480_05965"
                     /inference="COORDINATES: protein motif:HMM:NF012312.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJN06142.1"
                     /translation="MNNNTKAAKINKRSLIAGFSGNVLEWYDFTVYGFFATVIGSQFF
                     PNEDKVVQLISAFGVFAAGYLMRPIGGIIFGHIGDSQSRKKALLISVLLMAIPTTLIA
                     FLPNYESIGWYSALLLIILRLLQGLSVGGEFTGSISFLVEKAPKNRRGFYGSWSTFGV
                     FGGMLLGSGLAALITAILDNNQLHDFGWRIPFLFGAVIGIVGLYLRKGMGDDEHFEKV
                     IKEHKSNKPPISEFWADYKIQALKIVLLSWAFGVSVYMIFIFLPSYLHTFLHVKLDDA
                     LSSHTIAIVVLMLMIPLFGILTDKFGRKKVLFASLIGFVVFSYPLFALMFESTFTAIL
                     IATLVFAIFEAMFQGVMPALMTETFPTRVRYTGLSVSYNFALALFGGTTPLVCTWLIK
                     ISGGNVWMPAYYLIATCIIGIIVAMYMPETFKNELE"
     gene            complement(1517..>2029)
                     /locus_tag="QF480_05970"
     CDS             complement(1517..>2029)
                     /locus_tag="QF480_05970"
                     /inference="COORDINATES: protein motif:HMM:NF014344.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine deiminase family protein"
                     /protein_id="HJN06143.1"
                     /translation="SRRGEITEIKAVLKKYYKNIEQIESPGTVEAGDIMMVGSHFFIG
                     LSERTNAIGAEQLIECLEKYGKTGSVVKLEKVLHLKTGLAYLEHNNLIACGEFLSNEE
                     FRKFNILEIDKDESYAANCIWVNNKVLIPKGYPKAKKTIEKAGYEIIEIDVSEFKKLD
                     GGLSCLSLRF"
BASE COUNT          610 a          332 c          355 g          732 t
ORIGIN      
        1 cattgaaata ttgataactt ccttaacgct tcgctagaag ttaccaacat ttcaacagtc
       61 aagaaacaac atcaaaaaaa gtaaaagtgt ctataaataa aaaagctaaa tttgtccaag
      121 agggtttgaa gtcaaacact agatcttaca aataaagtgg ataattaata atgtatatct
      181 ttattggttt taaattatag tagatgaata ataatactaa agcagctaaa attaataagc
      241 gatctcttat cgctggcttt tcaggtaatg tacttgagtg gtacgatttt acagtttatg
      301 gattttttgc cacagttata ggttctcaat tttttcccaa cgaggataaa gtagtacagt
      361 taatttctgc ctttggcgta ttcgcagctg gatatttgat gcgcccaatt ggagggatta
      421 tttttggcca catcggtgat agccaaagcc gtaaaaaagc acttttgatt tcagttttat
      481 taatggcaat acccactaca ttaattgctt ttctaccaaa ctatgaaagt ataggatggt
      541 actctgcatt gcttttgatt attttgaggc tactacaggg attgtcagta gggggtgaat
      601 tcacaggctc catatctttt ctagttgaaa aagctcctaa aaataggaga ggtttttatg
      661 gaagttggtc aacttttggg gtttttggag gaatgctttt aggctctgga ttagctgcct
      721 taataacagc cattcttgac aacaatcaac tgcatgattt tggatggcgt attccgtttt
      781 tgtttggtgc ggtaataggt attgtgggac tttatcttag aaagggaatg ggagatgatg
      841 agcattttga aaaagttatt aaagagcata aatctaataa gcctcccatt tcagagtttt
      901 gggctgatta taaaatacaa gctcttaaaa ttgtactatt gagttgggca tttggagtgt
      961 ctgtttacat gatatttata tttcttccat cctatcttca tactttcctc catgttaaat
     1021 tggatgatgc cctttcatct cacacaatag caatagttgt tttaatgttg atgataccgt
     1081 tatttggaat tctgactgat aaatttggaa gaaaaaaagt actatttgca tcacttattg
     1141 gttttgttgt tttcagttac cctctttttg ctttgatgtt tgaaagtaca tttacagcca
     1201 tcttaattgc cacactggta tttgctattt ttgaagcaat gtttcagggt gtgatgccag
     1261 ccttaatgac cgagactttt cctacaaggg taagatacac aggtctttca gttagttaca
     1321 actttgcact tgccttgttt gggggcacaa ctccacttgt ttgtacctgg ctaattaaaa
     1381 taagtggtgg taatgtttgg atgcctgcat attatttaat agcaacatgt ataatcggta
     1441 ttattgttgc catgtatatg ccggaaacgt ttaagaatga actagaataa gaatggaaaa
     1501 aaatgtctta ataaatttaa aatcgtaatg acaaacaact aaggcctcca tcgagttttt
     1561 taaattcact tacatcaatt tcaataattt cgtaaccagc tttctcgata gttttttttg
     1621 ctttaggata accctttgga attagcactt tgttgttaac ccagatacaa ttggcagcat
     1681 aactttcatc tttatcaatt tccagaatgt tgaattttct aaattcttca ttagataaaa
     1741 attctccaca agctattaga ttattatgct ctaaatatgc caatcctgtt tttaaatgaa
     1801 gcactttttc aagcttaact actgagccgg tcttgccata tttttcaaga cactcaataa
     1861 gttgttcagc gcctatagca tttgttcttt cagataaacc aatgaaaaaa tgagaaccaa
     1921 ccatcattat atctcctgct tcaactgttc caggagattc tatttgttca atatttttat
     1981 aatacttttt tagtacagcc tttatttctg ttatttcccc tcttctgga
//
LOCUS       DASCQP010000350         3551 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001273689, whole genome shotgun sequence.
ACCESSION   DASCQP010000350 DASCQP010000000
VERSION     DASCQP010000350.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3551)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3551)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3551
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001273689"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1134)
                     /locus_tag="QF480_05975"
     CDS             complement(<1..1134)
                     /locus_tag="QF480_05975"
                     /inference="COORDINATES: protein motif:HMM:NF012235.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HJN06144.1"
                     /translation="MNYLSADNISKTYGEKTLFANISFGLNKGEKVALIAPNGAGKST
                     ILRILTGEESSDIGTVTTRSGIKISMLSQEPSFEEGLTVNEIIKNIDSGLIEIIQKYD
                     TAIQQHSESLSNETQQELENATSQMDFHKAWDYERRLKQLLEKFNIVDLDQQVETMSG
                     GQIKRLALALTLLDDPDVLLLDEPTNHLDVEMIEWLEKQLQTSTVTLLMVTHDRYFLD
                     RVCNNIIEISNGEIFHHKGNYSYFLEKKSEREEVSRIEVDKARKLMKKELDWMRRMPK
                     ARTTKSKARIDSFYKTKDKATSSKAKEELKLGVHMSRVGNKILEMENVSKSYDDIVIL
                     NGFDYVFKKGERIGLVGKNGVGKTSFLDLIMQHEKPDAGTIVSG"
     gene            1315..1869
                     /gene="rimM"
                     /locus_tag="QF480_05980"
     CDS             1315..1869
                     /gene="rimM"
                     /locus_tag="QF480_05980"
                     /inference="COORDINATES: protein motif:HMM:TIGR02273.1"
                     /note="Essential for efficient processing of 16S rRNA;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HJN06145.1"
                     /translation="MPHNIMINMSDFNDYFYLGKVVKPHGYEGKVSIYLDTDEPQEYA
                     DLEMIFINIRGNLVPYFISNLSLLNNKAVVSFLDVDNIDKANELLNKEIYLPTSLLPE
                     LTGNKFYYHEVKNMIVIDNKYGELGPINAVLEYPNQAVLQIYHQGKEVLIPISDDIIL
                     HVDRKQNRMSIKSPEGLLDIYLDS"
     gene            complement(1882..2538)
                     /locus_tag="QF480_05985"
     CDS             complement(1882..2538)
                     /locus_tag="QF480_05985"
                     /inference="COORDINATES: protein motif:HMM:NF019500.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ion channel"
                     /protein_id="HJN06146.1"
                     /translation="MIHHNKLTFGVDKTIFLLMSIVAFVFIFPIIDNEVIHDLFITIS
                     YTLVLLSIFSIVGSMTKLLSYLVVLAVVANFLLLFFADRLLGVISFLISTLTFTIATG
                     VLIKHIAISKNVTVAVVIQAISGYLLIGIIGVLLNSILLAFDENAITLTISGSKFSSI
                     IYYSFITLTTIGYGEIVPQSVFARSISIFIGVCGQMYLTVIIALIVGKYLSLNLRKKS
                     "
     gene            2661..>3551
                     /locus_tag="QF480_05990"
     CDS             2661..>3551
                     /locus_tag="QF480_05990"
                     /inference="COORDINATES: protein motif:HMM:NF012550.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitase family protein"
                     /protein_id="HJN06147.1"
                     /translation="MNIIEKIISSHSDKNTVTQGQIVDIDIDARVARDFGGPNVVKNL
                     EDHGLTIGDTSKTFFTFDTNPTGSDQKYAVNQQIVRTFARKHGIKVYDIDNGIGTHTL
                     IKEGLAWPGSTAVTTDSHANILGAICAFGQGMGDKDISAAFNKGKVWFKVPESVKITL
                     TGIRPDNVSAKDIVLNLLHKFGANSLLGMAVEFYGYEVDKLTLDERITIASMGTEMGV
                     IILLFPPNDEVIQYCEKSTGRKLDRIEADSDATYADEHIIDISTFVPMVSLPGKPHDT
                     IDIDTQKKVRIDSGFIGSCTN"
BASE COUNT         1210 a          643 c          575 g         1123 t
ORIGIN      
        1 tcctgaaact attgtgcctg catctggttt ttcatgttgc ataattagat caagaaaact
       61 tgttttcccc acaccattct ttccgaccaa tccaatacgt tcgccttttt taaatacata
      121 atcaaatccg ttgagaatca caatatcatc ataacttttg ctcacgtttt ccatctcaag
      181 aattttattt ccaacacgag acatgtggac tcctaatttc aactcttcct tcgctttact
      241 acttgtggct ttatcttttg ttttgtagaa actgtcaatt cgggctttcg atttagtagt
      301 tcttgctttt ggcattctac gcatccaatc aagctccttt ttcatcagtt tgcgagcttt
      361 gtcaacctca atacgactaa cctcctccct ttcggatttc ttttcaagaa aatagctgta
      421 attcccttta tgatgaaaaa tctcaccatt acttatttca ataatattat tacaaaccct
      481 atccaaaaaa taacgatcat gtgtaaccat taagagtgtt actgttgaag tttgtaattg
      541 tttctcaagc cattcgatca tctcaacatc gaggtgattg gtaggttcat ctaataatag
      601 aacatcagga tcatccagca atgtaagtgc aagtgccaat cttttaatct gtcctcctga
      661 catagtctcg acttgctgat caagatcaac aatattgaat ttctcaagaa gttgcttaag
      721 tcttctctca taatcccagg ctttgtggaa atccatttga gaagtagcat tctctagctc
      781 ttgctgtgtt tcatttgata aactttcaga atgctgctga atagcagtat catatttctg
      841 gataatttct attaatcctg aatctatatt tttaataatt tcgttcacag ttaatccctc
      901 ttcaaaagaa ggttcctgcg aaagcattga aattttaatt cctgaccttg tagtaaccgt
      961 accgatatcg cttgattcct caccagtaag tattcgtaat attgtcgatt ttccggcacc
     1021 gttgggtgca atcagtgcaa ctttctcacc tttatttaaa ccaaagctaa tattagcaaa
     1081 aagtgttttt tcaccgtaag ttttcgaaat gttgtctgct gacaaataat tcatcaatcc
     1141 ctaatttgca actgttgtat caaaactgaa agtatgcaaa agtaatttat ttatgggctg
     1201 caagaaatca aataaacttc atagtgcagt tggatagaaa tagtaccaag atgttccggg
     1261 aagccatctt taatcctaac caaaactcta ttttctaaac taaataaagt aattttgccg
     1321 cataatatta tgattaacat gagtgatttt aatgattatt tctatcttgg taaagtagta
     1381 aaaccacatg gttatgaagg gaaagtatcc atttatttgg acactgatga acctcaggag
     1441 tatgctgatc tagagatgat attcattaat attagaggta atttggttcc atatttcatc
     1501 agcaatctta gtctgctcaa taataaggcc gtggttagtt ttttggatgt ggataacatt
     1561 gataaagcga atgagctttt aaacaaagaa atatatttac caacatctct acttcctgag
     1621 ctcaccggaa ataaatttta ttaccatgaa gttaaaaaca tgatcgtgat tgataacaaa
     1681 tatggagagc ttggtccaat aaatgcagtt cttgaatatc caaatcaagc agtattacaa
     1741 atttatcacc aagggaaaga agtcttaatt ccaattagtg atgatataat tctacatgtt
     1801 gacagaaaac aaaatagaat gagcattaaa tctccagagg gattactaga catatatctc
     1861 gattcttaga gttatctgat tttatgattt ttttctcaaa tttaaactca ggtacttacc
     1921 aactattaaa gcaataatta ctgtaagata catctgacca caaaccccaa taaaaatgct
     1981 tatcgatcgg gcgaacacac tttgcggcac tatttcaccg taacctattg ttgtaagtgt
     2041 tataaaacta taataaataa tagagctaaa cttgctgcca cttattgtta aagtgattgc
     2101 attttcatca aaagccagca ggatagaatt tagtaacacg cctataatgc caatcagcaa
     2161 gtatccacta atagcctgaa taacaactgc aacagttaca tttttactaa tagcaatgtg
     2221 tttaataagt acaccagttg caattgtaaa agttaatgta cttattaaaa atgaaatcac
     2281 tccaagcagt ctgtcagcaa aaaaaagcag gagaaaattg gcaactacag ccaaaacaac
     2341 caaatacgaa agtaacttag tcatacttcc cacaattgaa aatatcgaca agagaacaag
     2401 tgtatatgaa atcgtaataa aaagatcatg aatgacctca ttatcgatta ttggaaaaat
     2461 aaaaacaaac gcaactatcg acatcagaag aaagatagtt ttatcaactc caaaagttag
     2521 tttgttatga tgaatcatac ttaggtgatt tgcttaaaac caaacaaata tagttaataa
     2581 atttaactac aaaatttcta attttaaact catagtgtgc ttgatttact ctatttttga
     2641 acattcaaaa acagactgaa atgaatataa ttgaaaaaat aattagctca cattctgata
     2701 aaaatacagt tactcaggga cagatagttg atattgatat tgacgcaaga gttgcacgtg
     2761 attttggtgg tccaaacgtt gttaaaaatc ttgaagatca cggacttaca ataggagaca
     2821 cttcaaaaac attctttaca tttgatacaa acccgacagg cagtgatcaa aaatatgctg
     2881 ttaatcagca aattgtaaga acatttgcgc gtaagcacgg cattaaggtt tacgacatcg
     2941 acaatggaat tggcacccat acattaataa aagaaggact ggcctggcct ggttccacag
     3001 ctgttactac cgactcacat gctaacatat taggtgcaat ttgtgcattt gggcagggca
     3061 tgggagacaa ggatatcagt gccgctttca ataagggtaa agtatggttt aaagtacctg
     3121 aatcagttaa gattacactt accggtatca gacctgataa tgtatcagct aaagatatcg
     3181 tccttaattt gcttcacaaa tttggagcta atagtttact tggcatggca gttgagtttt
     3241 atggttatga agttgacaag ttaactctag acgaacgaat caccattgca tcaatgggta
     3301 cagaaatggg agttatcata cttctcttcc cgccaaacga tgaggtcata caatattgtg
     3361 aaaaaagtac gggaagaaaa ctagacagaa tagaagcaga ttctgatgcc acctatgctg
     3421 atgagcacat aattgatata agcacatttg tcccaatggt tagcctgcca ggcaaaccac
     3481 atgatactat tgatattgat actcaaaaga aagttcgaat tgattcagga tttataggaa
     3541 gttgtactaa c
//
LOCUS       DASCQP010000351         2583 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001285220, whole genome shotgun sequence.
ACCESSION   DASCQP010000351 DASCQP010000000
VERSION     DASCQP010000351.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2583)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2583)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2583
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001285220"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..561)
                     /locus_tag="QF480_05995"
     CDS             complement(<1..561)
                     /locus_tag="QF480_05995"
                     /inference="COORDINATES: protein motif:HMM:NF013663.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003951 - NAD+ kinase activity [Evidence
                     IEA];
                     GO_process: GO:0006741 - NADP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+)/NADH kinase"
                     /protein_id="HJN06148.1"
                     /translation="MKVALFGKVYADNQKDYLQLLIDELTKRDSQICVFEPYYKAIKA
                     EVNFGENISFFNSNRDIKNKVDILFSIGGDGTILDTVPIVRNSGIPILGINLGRLGFL
                     SSVSKNEIIDAVNNIFNGDYIIDKRSLLQLIEPKKLFGDIDYALNDLTIYRNNTTSLI
                     VVHVYVDDKFLNSYWGDGLIVSTPTGS"
     gene            complement(863..2278)
                     /locus_tag="QF480_06000"
     CDS             complement(863..2278)
                     /locus_tag="QF480_06000"
                     /inference="COORDINATES: protein motif:HMM:NF018899.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="POTRA domain-containing protein"
                     /protein_id="HJN06149.1"
                     /translation="MIFLRFLPILLIITIACEQALAFTGDENIKDDSLVTINSIILKG
                     NKITKDKIILRELEFEKGTKLKSSVLDSLILESRQNLLNRSLFNFVTITKKTVNNRCN
                     IEVSVIERWYIWPFPILQFADRNINTWWDKRDFSRINYGVDLRVENFRGLMENLDIII
                     QGGYDILLAFRWNIPYLTKNQIFGMGIGAGVQLNHEVAYQTINNKEQYYNSGSGFAQR
                     FTYAETSFTFRPKFNYLHNFTVRFKQHIIQDTILKLNPDYAFSETTYNYFTLNYTFKL
                     DFRDYNPYPLKGYYFNIGLLKTGLGIFDDQINDFSVDANFDQYLNIYSRWYFAYNFRA
                     MFSSQKKRTPYFINSGLGYFPNTIRGYELYVVDGQKLGIVKSNLKFELIPRTNFSIDW
                     IKSTKFSEAFFAMYANLFFDMAYVDDIYTYRLNPLSNQLLWSTGIGIDMVTYYDLVLR
                     LEVSVNKQKDTGFFISFVAPI"
     gene            complement(2282..>2583)
                     /locus_tag="QF480_06005"
     CDS             complement(2282..>2583)
                     /locus_tag="QF480_06005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HJN06150.1"
                     /translation="SVDYPGGVIVLEVSVNDYSLTEIANIVESNDAKVLSSYILSKVN
                     STKLEVIIKVSKLELGSILQTFERFGYQVNASFEEDVDLDELKDNYDSLINYLNI"
BASE COUNT          901 a          453 c          353 g          876 t
ORIGIN      
        1 tgatcctgtt ggggttgaca cgattaatcc atcgccccaa tatgaattca aaaatttatc
       61 atcaacatat acatggacaa caattaatga agtagtatta tttctgtaaa ttgttaagtc
      121 atttaatgca tagtctatat ctccaaataa cttctttggt tcaattaatt gaagtagtga
      181 tcttttgtcg attatataat ctccattaaa aatattattt acggcatcaa taatctcgtt
      241 ttttgaaacg cttgacaaaa agccaagccg tccaagattt attccaagaa taggtattcc
      301 agaattccta actatcggca ctgtatctaa tatagtccca tcaccaccaa tagaaaatag
      361 aatatcaacc ttatttttaa tatctctatt cgagttaaaa aaagatatat tctcgccaaa
      421 gtttacttct gctttaatgg ctttataata tggctcaaaa acacaaatct gggagtctct
      481 ttttgtcaac tcatcaatca ataattgcaa gtaatctttc tgattgtcag catatacctt
      541 accaaataat gcaactttca tgctaatgaa atttttactg gcaaatgtaa cttaaaaacc
      601 caaaataaat gcttaattat agcttataac caattgaaat aaggcaggaa aggttactaa
      661 aaagttaaaa tatcttatac tatgatcttc aataaatcaa gtatcttatt aattcttaac
      721 aacttaagaa tcgtagctca atctgaagca acaatctttt ctaactaatt aggggttagt
      781 ttattaactt tttttaacta agaattccaa atttgttaac aggatgcttg agtttttttg
      841 atttaagcac tacaaattgg aattaaatag gtgctacaaa acttataaag aatccagtat
      901 ccttttgttt atttactgat acttcaagcc tcaaaactag gtcgtaatat gtaaccatat
      961 ctataccaat accggtactc caaagaagtt gatttgataa cggatttagt ctataagtat
     1021 aaatatcatc aacataagcc atatcgaaaa acaggttagc atacattgca aaaaacgctt
     1081 cgctgaattt tgttgacttt atccaatcta tactgaaatt tgtacgagga ataagttcaa
     1141 acttcagatt tgattttaca atacctaatt tctgtccatc aacaacgtat aattcatagc
     1201 cccttatagt gtttggaaaa tagccaagcc ctgaatttat aaaataaggt gtgcgttttt
     1261 tttggctcga gaacatcgct ctaaaattat atgcaaaata ccacctacta taaatattca
     1321 aatactgatc aaaatttgca tcaacagaga agtcgttaat ctggtcatca aatataccaa
     1381 gcccggtttt aagaagacct atattaaaat aataaccttt aagtggataa ggattgtaat
     1441 ctcgaaaatc cagcttaaaa gtataattaa gggtaaaata attatacgta gtttctgaaa
     1501 atgcataatc aggatttaat ttcaggattg tgtcctgtat tatgtgttgt ttaaacctaa
     1561 ctgtaaagtt gtgcagataa ttgaatttag gacgaaatgt gaaacttgtc tctgcatagg
     1621 taaatcgttg tgcaaaacca ctgccagagt tataatattg ctctttgttg ttaatggttt
     1681 ggtaagcgac ttcatgattg agctgtactc ctgctcctat tcccattcca aatatctggt
     1741 ttttggtgag ataaggtata ttccatctaa acgctaacag gatatcataa ccaccctgaa
     1801 taattatatc aagattttcc atcaaacctc tgaaattctc aacacgcaag tcaacgccat
     1861 aattaattct actaaaatct cttttatccc accaggtatt tatgtttcta tctgcaaact
     1921 gaagtattgg aaaaggccat atataccacc tttcaataac tgaaacttct atattgcacc
     1981 tattattgac agtttttttt gttatagtaa caaaattaaa cagcgatcgg tttagcaaat
     2041 tttggcgact ctctaatatc aaactatcaa gtacagaaga tttgagttta gtaccttttt
     2101 caaattccaa ttcacgcaat attattttat cctttgtaat tttattacct ttcagaataa
     2161 ttgaattaat cgtcactaga gaatcatctt ttatattttc atctccagta aatgccaatg
     2221 cttgctcgca tgcgattgta attatcaata atataggtag gaaccgtaaa aaaatcacat
     2281 cttaaatatt gaggtaatta attagggaat cgtaattatc tttaagttca tcaagatcaa
     2341 catcctcttc aaaagatgcg tttacctggt atccaaagcg ttcaaaagtt tgaaggatcg
     2401 agccaagttc caacttactc actttgataa taacttctaa ttttgttgaa ttaactttag
     2461 ataatatata cgaactgagc accttagcgt catttgattc aacaatattg gcgatctccg
     2521 tcagactgta atcgttaaca ctaacttcta aaacaattac accaccagga taatctaccg
     2581 aca
//
LOCUS       DASCQP010000352         1700 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001285673, whole genome shotgun sequence.
ACCESSION   DASCQP010000352 DASCQP010000000
VERSION     DASCQP010000352.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1700)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1700)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1700
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001285673"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(289..1644)
                     /locus_tag="QF480_06010"
     CDS             complement(289..1644)
                     /locus_tag="QF480_06010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06151.1"
                     /translation="MIATNTNKVLLKDGSNIVVIGGGPSGSFFSYFALKYAEKRGLEI
                     NIDIIEAKNFNCLGPAGCNNCGGIVSESLIQMLSAEGIILPSEVIRKGIETYTLHLEQ
                     GRAVIEAPIDEQRIASMFRGLGPSGCAPNGLKSFDDHLLELCISKGANVILDRVVELE
                     RKKDGILVKTKSNIKKEYDLVVGAVGLNQEAFRLFHKICPAFVHPKTTRTHICEIKMD
                     SGLINEYFGNSMHVFLLNLPNIEFGALIPKANYVTLVLLGKDIDKKIAGKFLNSDPVK
                     KCFPPKFDLESNISCRCYPHINIKGAKSAYDNRVVLIGDSSTSKLYKNGIGAAYITAK
                     SVAHTAIFQGISKENFKKYFQPVCNNLEFDNSIGKFIFMVTSIIQKSAVLKSSMLQVV
                     IDEQQNERHRRKMSSILWDTFTGSAPYKDIFWRFLNPRILFTLIWNTMLAIQRSIKNK
                     I"
BASE COUNT          547 a          311 c          257 g          585 t
ORIGIN      
        1 catctaagta aagcctattt tgaacaaatg taaaaagtaa tgatgaaaat attgggggga
       61 aggtatactg atagccgaat gattgttaat taagccctat gtttgaccaa caatgcttga
      121 tacttttttt cataaatccg aagatattct ccactttatc tccagccttt gacaagttta
      181 atattttttt tgcaaaacgg aaaaataaca atcatcaaat tcgacaacat ttgtcattta
      241 ttgatgacat ctaacgtcgt tattgctaat tttgaaactt ccaaataatt agattttatt
      301 ttttattgag cgttgaattg caagcatcgt attccatata agtgtaaaga gaattcttgg
      361 atttaaaaac ctccagaaaa tatctttata aggtgcgcta ccagtaaacg tatcccaaag
      421 gatagaactc atttttctcc tgtgtctttc attttgttgc tcatcaataa ctacctgaag
      481 catagaactt tttaatacgg ctgacttttg aataatcgat gtaaccatga aaataaactt
      541 gccaatactg ttatcaaatt ccaggttatt acatactggt tgaaaatact ttttaaagtt
      601 ttcttttgat attccttgaa atattgctgt atgagctaca gacttagctg ttatgtaagc
      661 tgctccaata ccatttttat ataattttga ggtagaggaa tcaccaataa gtaccaccct
      721 gttatcatac gcagattttg ctccttttat attaatgtgt ggataacaac ggcatgatat
      781 gttactttcg agatcgaatt ttggaggaaa acattttttt acaggatcgg aattaagaaa
      841 ttttcctgct atctttttgt caatatcttt tcctaacaat acaagggtta cataattagc
      901 ttttggaatt aatgctccaa attcgatatt aggtaaatta agaagaaaaa catgcatcga
      961 attaccaaaa tattcgttga taagtccgct atccatttta atttcacaaa tatgcgtacg
     1021 agttgttttt ggatgtacaa aagctgggca aattttatga aataaccgaa atgcttcctg
     1081 attaagccct actgccccaa cgacaaggtc atactccttt ttaatattac tcttggtttt
     1141 aacgagtatt ccatcctttt ttctctccaa ttcaacaacc ctgtcgagta taacatttgc
     1201 acctttcgat atgcataatt ccaataagtg atcatcgaaa cttttgagac cattgggagc
     1261 acaacctgat ggaccaagtc ctctgaacat agaagcgatt ctttgttcat caatcggtgc
     1321 ttcaattact gctctgccct gctcaagatg aagcgtatag gtttcaatac cttttctgat
     1381 aacttcagaa ggtaatataa taccttctgc tgaaagcatt tggattaagg attcggagac
     1441 aattcctccg cagttattgc atccggcagg acctagacag ttgaaattct ttgcctcaat
     1501 gatatcaata ttaatttcca aacccctttt ctcagcatat ttcagagcga aataggaaaa
     1561 aaaactacct gatggacctc caccaattac aactatattg gagccatctt ttaataatac
     1621 tttatttgta ttcgtagcta tcacaaattc gatttcctta aactgtgcaa taattattaa
     1681 ctattgagaa attcaaacta
//
LOCUS       DASCQP010000353         3925 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001286920, whole genome shotgun sequence.
ACCESSION   DASCQP010000353 DASCQP010000000
VERSION     DASCQP010000353.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3925)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3925)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3925
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001286920"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1837)
                     /locus_tag="QF480_06015"
     CDS             complement(<1..1837)
                     /locus_tag="QF480_06015"
                     /inference="COORDINATES: protein motif:HMM:NF013080.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HJN06152.1"
                     /translation="MSYKTNNFPNILLIIRTYILVICVFFIFRLILFLSEIDRINFSE
                     ADFSTIIQAFIMGVRFDIVISGYILLLPATIIFIFGLFGIESRILRNIIFYWVFILFT
                     ISFFISAADVPYFNQFYSRMSISAFEWLDNADFVFSMIIQESRYFLYILPFLLLTIIF
                     FFFLKRVFRIKQEKIRLNLFSNILVSVLFLALMFLGIRGRIQEKAPISIGTAYFSNNS
                     FLNKLGLNPVFTLMRSWLDSRKEDNATIQLMDNQMAINNIQKYLHFDEYEYNSPIARS
                     ILPDTSTDISQKYNIVIIIMENMSAAKMKRHGNDNNLTPFLDSISWQSYYFENIYSAG
                     KHTYNGIFSTLFSFPGLYRQHPLKQIKKYDGISTTLLKHGYTTTYFTTHDSQFDNVEG
                     FLRENDFQNIISQTDYPLSEIKTTLGVPDDYMFRYAIPEIDKLSELDKPFFVTMVTAS
                     DHGPYYIPNYFQPKSESKKMQIVEYADWSLQQFISLSSEKKWFDNTIFVFVADHGTPL
                     FALYDISLNYFHTPLIFYAPKILKENKIFNFIGGQVDIFPTIMGLLKLPYINNTLGID
                     LINESRPYIIINDDDKIGVLDTTQFLILSKDNESRLYNYKDKDLTN"
     gene            complement(1946..2425)
                     /locus_tag="QF480_06020"
     CDS             complement(1946..2425)
                     /locus_tag="QF480_06020"
                     /inference="COORDINATES: protein motif:HMM:NF024297.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HJN06153.1"
                     /translation="MKNLLITSVLTNILIISLMANVSLYALDTSALHKNYASAIENVD
                     EADIIKKAVEQFYIQGLQERNFTLIREICINEAKLYGVRSDSSIVITTLDQWSKNFDP
                     DNPPFKTLEYKIEKIDFAGTAAQVKILFIINGNNKIYDFLNMLKIDGSWRIVNIIDY"
     gene            complement(2489..3181)
                     /locus_tag="QF480_06025"
     CDS             complement(2489..3181)
                     /locus_tag="QF480_06025"
                     /inference="COORDINATES: protein motif:HMM:NF024875.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S double cluster binding domain-containing
                     protein"
                     /protein_id="HJN06154.1"
                     /translation="MIDSVLQNKLVPSDNYIYGTAVLSGLIDKKFGNFQFGLSIGKKL
                     DDKIVDSIEFGPTLEYYEHYNQVNKELSDKAVEIKNELYKINIDSIVIDPTVSTEFID
                     NTKTLTVDISHKMVATRAGLGWIGKADLFISSRFGPRLRLVSILINKKPYSDSIPIEK
                     SRCGSCNICVDLCPAQAANGKLWNINVRRDDFFNANKCKEMCAELARQELNIDSRICG
                     ICVSVCPIGIRG"
     gene            complement(3391..>3925)
                     /locus_tag="QF480_06030"
     CDS             complement(3391..>3925)
                     /locus_tag="QF480_06030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06155.1"
                     /translation="DNEFYPVTVMNYKLGGSFNGYVNLVLREEKGFTYGARTNFSGSH
                     IPGVFKASSGVRSNATQESVAIFKDLMEQYREGITDEDLAFTKNALIKSNALKFETLR
                     ALIGMLEGISMYDLPDDYVIDQEEIVRNMTMESHKELAQKYIDPAKMYYVIVGDAATQ
                     LEPLEEIGFGKPEVIIP"
BASE COUNT         1352 a          668 c          537 g         1368 t
ORIGIN      
        1 aattagttaa gtctttgtcc ttgtaattat acaatcttga ttcattatcc ttacttaata
       61 ttaaaaattg agttgtgtca agtactccta tcttatcatc gtcattaata ataatatagg
      121 gtctgctttc attaataagg tcaattccta atgtattgtt aatataaggc aatttaagca
      181 aacccataat tgtaggaaat atatcaacct gaccaccgat aaaattaaat attttattct
      241 cttttagaat cttaggggca taaaaaatta aaggtgtatg aaagtaattt aaagaaatat
      301 catatagggc aaatagtggt gtaccatggt cggctacaaa aacaaatata gtattatcaa
      361 accatttttt ttcagaactt aaagaaataa attgttgtaa tgaccagtca gcgtattcaa
      421 caatttgcat ctttttgctt tcactttttg gctgaaaata atttggaata taatatggac
      481 catggtcgct agctgtgacc attgtaacaa aaaaaggttt gtctaattcg gatagtttat
      541 caatttccgg aatggcatat ctaaacatat aatcatcggg gactcctaaa gtagttttaa
      601 tttcagataa aggataatct gtttgactaa taatattctg gaaatcattt tcccttaaaa
      661 aaccttcaac attatcaaat tgactatcgt gagttgtaaa atatgttgta gtatatccat
      721 gtttcaatag tgtagtacta ataccatcat atttttttat ctgcttcaaa ggatgttgcc
      781 tgtataggcc aggaaaagaa aaaagagtgc taaatatccc attataggta tgtttgccag
      841 cggaataaat attctcaaaa taatatgact gccacgagat actatcaaga aaaggtgtta
      901 aattattatc atttccatgt cttttcatct ttgcagcact catattttcc attataataa
      961 tcactatatt atacttttgt gatatgtctg tagaagtgtc aggtaatata ctacgtgcaa
     1021 ttggagaatt atattcgtac tcatcaaaat gaagatattt ctggatatta ttaattgcca
     1081 tttgattatc cattaattgg atagttgcat tatcctcttt cctactatcc agccaacttc
     1141 tcattaaagt gaatacagga tttaagccaa gtttatttaa aaatgaatta tttgaaaaat
     1201 atgctgttcc aatacttata ggggcctttt cttgaattcg ccctctgata cccaaaaaca
     1261 taagtgcaag aaaaagaaca gatacaagaa tatttgagaa aagattgagt cttatttttt
     1321 cttgctttat tctaaaaact cttttaagaa aaaagaaaaa tatgattgtc aataataaaa
     1381 acggtagtat gtaaaggaaa tatcttgact cttgtataat cattgagaac acgaaatctg
     1441 cattatcaag ccattcaaaa gcactgattg acatgcgaga ataaaattga ttaaaatatg
     1501 ggacatctgc tgctgatata aaaaaagaaa tcgtaaacaa tataaaaacc caataaaaaa
     1561 tgatgtttct taatatccga ctttctatcc caaataaacc aaaaataaaa atgattgttg
     1621 cgggcagtaa caatatataa ccagagataa caatatcaaa ccgaactccc attatgaatg
     1681 cttgtatgat tgttgaaaaa tcagcttcac taaaattaat tctgtcaatt tcacttaaaa
     1741 acagaattag tctaaaaatg aaaaaaacac atataacaag aatataggtt ctaattatta
     1801 ataaaatatt agggaagttg ttcgttttat aactcatttc cttttgtttc ttcaagagcg
     1861 cagttggtca ctttaataaa atccagaatt gtgtatggct ggtactcaaa tggtttatag
     1921 cctttggtat gcacaaattt tttatctaat aatcaatgat atttacaatt ctccaactac
     1981 catcaatttt tagcatatta aggaaatcat aaatcttatt attaccattt atgataaata
     2041 agatttttac ctgagcagca gttcctgcaa aatcaatctt ttctatttta tattctagtg
     2101 ttttaaatgg gggattatca ggatcaaaat tcttagacca ctgatcaagt gtagttataa
     2161 ctatactact gtcacttctt acaccatata atttagcttc atttatgcat atctctctaa
     2221 ttagagtaaa gtttctttcc tgcaatcctt gaatataaaa ttgttcaact gcctttttga
     2281 ttatatctgc ttcatcaaca ttttcaattg ctgaagcata atttttatgc aatgctgatg
     2341 tatctaaagc gtataaggat acattagcca tcaagctgat tatcaatata tttgtcaaca
     2401 cagatgtaat tagtaggttt ttcatatcaa attaaaatta gttattagtt gcgttataaa
     2461 atgattccaa aggtatttaa ttattacttc atccccgtat tcctattgga catacagaaa
     2521 cacatattcc acatatccta ctatcaatat taagttcttg ccttgctaat tcagcacaca
     2581 tttctttaca cttatttgca ttgaaaaaat catctcgacg tacattaatg ttccatagtt
     2641 ttccattggc tgcttgagcc ggacataagt caacgcaaat attacatgac ccacatctgc
     2701 ttttttcaat aggaatagaa tcactataag gttttttatt tatcaaaata cttactaatc
     2761 ttaaccgggg tccaaaccta ctagagataa acaaatccgc tttaccaatc caaccaagtc
     2821 ctgctcttgt ggcaaccatt ttatgtgaga tatcaacagt tagcgtcttc gtattatcaa
     2881 taaattctgt tgaaactgta ggatctatta ctattgagtc gatattaatc ttataaagtt
     2941 cattttttat ttctactgct ttatctgata attctttatt aacctgattg taatgttcgt
     3001 aatactcaag ggtcggtcca aactcaatag aatcaacaat tttatcatcc aattttttgc
     3061 ctatagataa tccaaattga aaatttccaa attttttatc aatcaaccca ctcaaaacgg
     3121 cagtcccata aatataatta tcactgggaa ctagcttgtt ttgtaataca ctatctatca
     3181 tgtacaattt cattttatga acaccaacag ttgagttgta gtctattaaa ggtaaaccgt
     3241 tgtcaaaatg actccaaatc caatgcggca gcaatgttta gaaatttctc ttcttgatac
     3301 tactctgcaa ctaaattgac ttcaatagct ttgagcaatt ataatcaaga gtaatataaa
     3361 gtcctttatt caacaattac aaatacggaa ctaaggaatg ataacctcag gttttccaaa
     3421 tccgatttcc tccaaaggtt caagttgggt agctgcatca cctacaatta cgtaatacat
     3481 tttcgctgga tcgatatatt tttgtgcaag ttccttatga ctttccatag tcatgtttct
     3541 aactatctct tcctgatcta ttacataatc atccggaaga tcgtacatgc tgattccttc
     3601 aagcatacct ataagagcac gcagagtttc gaatttaaga gcatttgatt taatgagagc
     3661 attttttgta aaagcaagat cttcatctgt aataccttct ctgtattgct ccattaagtc
     3721 cttaaaaata gcaacagatt cttgcgtagc attcgacctt acacctgatg aggctttaaa
     3781 cacaccaggt atatgacttc ccgaaaaatt ggttcttgcg ccgtaagtga atcctttttc
     3841 ttctctcaat accaagttca catagccatt aaatgaacct cccagtttat agttcataac
     3901 cgttacagga taaaattcat tatca
//
LOCUS       DASCQP010000354         2054 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001295702, whole genome shotgun sequence.
ACCESSION   DASCQP010000354 DASCQP010000000
VERSION     DASCQP010000354.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2054)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2054)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2054
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001295702"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1886
                     /locus_tag="QF480_06035"
     CDS             <1..1886
                     /locus_tag="QF480_06035"
                     /inference="COORDINATES: protein motif:HMM:NF014567.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HJN06156.1"
                     /translation="QYIMKIGKGMLLKSILLVFLFGVLSCLASDVKEPLAKEDFSSLF
                     NKANSYENINNDSILFYAKRALEIANLEHNVSDQLNSLLLITSTEIKSDKFGEAIKHC
                     IIAKQIALKNDQIGPHIEFLVYTGFIYQKMGFSFQALGYFREAQEIAEESNYRIASND
                     IHYYLGSVFQYIGDTIASCRNLLISLSDSKINSYPKRMFEAYILLSNTFTSYDSINKY
                     LILAESLIDKHPELEYEKVVLRNKQGIINSTIGNIDLGNNQYLEAIRISKSNRYYSYL
                     ANLYNNYASLMMMEKKYDSVKTILGKALEIVTKMKITDLQYEILESTSEYCFVIGDYQ
                     KAFSYLTSASEKRKEYREQQRVQESLFLSVVVKNEQKEKEILFQENEIAKLWEIVLCI
                     LLLLAFFIGLGFYFRHKYLFKRIRLEIIEKGKSLEIADALIKGQDAERKRLAMDLHDG
                     LSANLGALRLLVDGFLINHEKYNEISTSLIDIHYDVRNLSHRMLPPQLESYGLLMTIK
                     NMASSINKTGKFTVKFETNLDRRLSDNLEINLYHLIHELITNATKHSNGDTIFIQLFD
                     QGDVLNISVEDNGSELNIKDDGSGMGLKNVKARVDYLRGKFMAETDKLKTVFMIEVPM
                     LES"
BASE COUNT          736 a          287 c          374 g          657 t
ORIGIN      
        1 atcaatacat tatgaaaatt ggtaaaggga tgcttctcaa aagtatatta cttgtttttc
       61 tatttggtgt attatcctgc ctagcttcgg atgtaaaaga gccactcgca aaagaggatt
      121 tcagctcact atttaataaa gccaactcct atgaaaatat taacaatgat tcaattttat
      181 tctatgcaaa gagagcacta gaaatagcga atttggaaca taatgttagt gaccagttaa
      241 actcattatt acttattact tctactgaaa taaaatctga taagtttggc gaagcaatca
      301 aacattgtat tatagccaaa caaattgcgt taaaaaacga tcaaatagga ccacatattg
      361 aatttttggt ttatacaggt tttatatacc aaaaaatggg cttctcattt caggcattag
      421 gatacttccg tgaagctcaa gagattgcag aagagagtaa ttatagaata gcttctaatg
      481 acattcacta ttatctagga tctgtatttc agtatatcgg agacaccatt gcttcttgca
      541 ggaatttatt aattagtcta tctgactcga aaataaatag ttatcctaaa cgcatgtttg
      601 aagcatatat tcttttgtca aatacattca cttcttacga ttcaattaat aagtacttaa
      661 tattggccga atcattaatt gataaacatc ccgaattgga atacgagaaa gtcgtgctac
      721 gtaataaaca gggaataata aacagcacaa ttggaaatat agatcttggt aataaccaat
      781 atttagaagc aattcgtatc tcaaaaagta atcgttatta tagttatctg gccaacctgt
      841 ataataatta tgcttctctg atgatgatgg agaaaaaata tgatagcgta aaaactatac
      901 ttggtaaagc attagagatt gtgacaaaaa tgaaaataac tgatctccag tatgaaatac
      961 ttgaatcaac tagtgagtat tgttttgtta tcggggacta tcaaaaagct ttttcatatc
     1021 taacctctgc aagtgaaaaa agaaaggaat atcgcgaaca acagcgagtt caggaatccc
     1081 tatttctttc tgtagttgtg aaaaatgagc aaaaagagaa ggaaatcttg tttcaggaaa
     1141 atgaaatagc caaattatgg gagatagtac tatgtatctt attactctta gcttttttta
     1201 tcggattggg tttttatttt cgacataaat atttatttaa acggatacga ctggaaatta
     1261 ttgagaaagg aaagtcattg gaaattgctg atgctctgat taagggacag gatgcagagc
     1321 gaaaacgctt agcaatggat ttgcatgatg gactgagtgc aaatctggga gctcttcgtt
     1381 tactagtgga tggatttctt attaaccatg aaaaatataa cgaaatctcc acatctttga
     1441 tagatatcca ttatgatgta cgtaatcttt cgcacaggat gctaccgcca caactggaaa
     1501 gctatggatt gttaatgaca attaagaaca tggcatcatc aattaataaa acaggtaagt
     1561 ttactgttaa gttcgagact aatctggaca gacgtttatc tgataacctg gaaattaact
     1621 tatatcacct tattcatgaa ttaataacta acgcaaccaa gcattctaac ggagatacta
     1681 tatttattca gttatttgac caaggggatg tgctaaatat atctgttgag gacaatggta
     1741 gtgaactcaa tattaaggat gatggcagtg gtatgggatt aaaaaacgta aaagcacgag
     1801 ttgattatct tagaggtaaa tttatggctg aaacggataa attgaaaacg gtatttatga
     1861 tagaagtacc aatgctagaa agttgattac atgacaattt gaatatatta cttatgatta
     1921 aactttttct tgttgatgat gattcccata ttcttcaagg gttgttggat catgagtttg
     1981 aagaatgtga atatagtata gtaggattag tgaaattaga aaatgatact tttggacaat
     2041 tgaaattaat tgat
//
LOCUS       DASCQP010000355         3083 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001301396, whole genome shotgun sequence.
ACCESSION   DASCQP010000355 DASCQP010000000
VERSION     DASCQP010000355.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3083)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3083)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3083
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001301396"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            382..1065
                     /gene="ung"
                     /locus_tag="QF480_06040"
     CDS             382..1065
                     /gene="ung"
                     /locus_tag="QF480_06040"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009347725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HJN06157.1"
                     /translation="MSAKKPKIEESWSEALKDEFLAPYFSDLKIFLSEEKKIHTIFPK
                     GSQIFSAFNHTPLPSVKAVILGQDPYHGEGQAHGLSFSVPDGVRQPPSLKNIFKELSE
                     DLSIKSPVSGNLEKWAKQGVLLLNATLSVRNGEAGSHQGQGWERFTDQVIKTISDLRA
                     GIVFLLWGKYAQDKIGLIDTDKHFILTAPHPSPFSVYRGFFGCKHFSKANSILMDNGL
                     EPIDWKLTE"
     gene            1193..>3083
                     /locus_tag="QF480_06045"
     CDS             1193..>3083
                     /locus_tag="QF480_06045"
                     /inference="COORDINATES: protein motif:HMM:NF019335.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HJN06158.1"
                     /translation="MASTLVYKQIGFLVLLLLTFGLSSVFAQENIVKGKITDKETGEE
                     LIGASVVIKGTTIGTVTDLNGNFELKTNQTPPFTVVISFLGYLSIEHSVNDFSTPIKI
                     KLEPDIVLMEEIQIIGSRISEKQKMSPLTTETMDVLAIKEAASGDFYESLGNLKGVDV
                     TSASMGFKVVNTRGFNSTSPVRSLQLIDGVDNQSPGLNFSLGNFLGSPDLDVMKVEIV
                     AGASSAYFGPGAFNGVINMTSKSPMLFPGLSVELKVGERNLTQLSVRWAQVIKNKAGN
                     DKFAYKLNILGMQAHDWEAGNLDASTTSEDTPSNYSGYDAVNRYGDEVLTGGNDYSGN
                     PITFPGLGRIYRTGYMEKNIVDYDTKNVKTNIGLYYKITDKIEINYGFNYSFGTTVYQ
                     GDNRYSLKNIQFFQNKLEIGQPDKFFVRAYMTHEDAGDSYDAVVTAFEVENAAKKEGV
                     FYKDYSSYYQTFIVPRMYDAGLPTNEENRPNLGEILATCGCTIEEALIIFGEANLEWQ
                     AATVGLQDDWIGQNKDSMLVWHAETREFSDNATASESEHPFFEPGTQRYDSLLNVITS
                     RLFTEGGSRFYDKSSLYNIDGQYQFKAGPVGFTLGGNYRLYTPVSKGTIFADTAGIKI
                     TNWNIG"
BASE COUNT         1027 a          496 c          620 g          940 t
ORIGIN      
        1 tgtcaaactg agcaaatgat gggaaactga taataatcag gaagagaacc agtatttttt
       61 cgaatctttt catcaccaag gaaagaaaaa taccggaaag ccggtaacta tttaataagt
      121 agaaagccca aatggcacag aaaattaata tttgctttct ttttgatact tatgattttc
      181 cccgtatgct gcacatttat tagatgattt gcatgaaata gcaaaaacag caagaagcgc
      241 tacagctgaa atgaggataa ttattttttt cataacttta ctactatatg gtttagtttg
      301 cgtatgacaa agaaaagcag attttaagta aataacaaga tttttttact tttattgttt
      361 aattttaatt ttcaaagtta tatgtcagca aagaaaccta agattgaaga gagttggagt
      421 gaagctttaa aagatgagtt tctggctcct tattttagtg atttaaagat atttttaagt
      481 gaagagaaaa aaatacacac tatctttcct aaaggctctc aaatattttc ggcatttaat
      541 cacacacccc taccaagtgt taaagcagta atattaggtc aggatccata tcatggcgaa
      601 gggcaggcgc atggacttag tttctccgtg ccagatggtg ttcgacagcc tccttcttta
      661 aagaatatat ttaaagaatt atctgaagac ttatctataa aatctcctgt ttctggaaat
      721 ttggaaaagt gggctaagca aggagtactc ttattaaatg ccactttatc tgttcgtaat
      781 ggcgaagctg gttctcatca aggtcaggga tgggaacggt ttacagatca ggtgataaaa
      841 acgatttctg atctcagagc tggaattgtg tttttgctgt gggggaaata tgcacaagat
      901 aaaattggat tgattgatac tgataaacac tttattctta cagcaccaca tccctcacca
      961 ttttctgtgt atagaggctt ttttggttgc aagcatttct cgaaagctaa tagtatttta
     1021 atggataatg gccttgaacc tatcgactgg aaattaacag aataataaag caccacaaga
     1081 taatttatct ttgaaagatc gttgtctaaa gaatgggatt atttaaaatt tcttttattt
     1141 tcagtaaaaa gttctaaatt gccaacttaa aaattggaaa ctaaccaact ttatggcatc
     1201 aacccttgtt tataaacaaa ttggcttttt agtacttctg ctattaacat ttgggttgtc
     1261 aagtgtattt gctcaagaaa acattgttaa aggaaaaatt actgacaaag aaacaggtga
     1321 agaattaatt ggagcaagtg tagttataaa aggaaccaca attggaaccg taacagattt
     1381 gaatgggaat tttgaattaa aaacgaacca aacccctcct tttacagttg ttataagttt
     1441 tttgggatat ctctcaattg aacattctgt aaatgacttt agcactccga taaaaattaa
     1501 gctggaacct gacatcgttt taatggaaga aatccagatc ataggtagtc gaataagcga
     1561 aaaacaaaaa atgtcaccct taacaactga aactatggat gtgttggcca taaaagaagc
     1621 cgcttcaggt gatttttatg aaagccttgg gaatctgaaa ggagtggatg ttacatcggc
     1681 aagtatgggg tttaaggtag ttaatacgcg aggatttaat tctacatcac ctgttaggtc
     1741 acttcaattg attgatgggg ttgataatca atcaccgggc ttaaactttt cacttggtaa
     1801 ttttttggga tcacccgatc tggatgttat gaaggtggaa atagtggcag gtgccagttc
     1861 tgcatacttt ggaccaggtg cttttaatgg ggtaatcaat atgacaagta aatcacccat
     1921 gttatttcca ggtttatcgg tcgaacttaa agttggtgaa cggaacctta cccagctaag
     1981 cgtaagatgg gcccaagtga taaaaaacaa agctggcaat gataaatttg cctacaaact
     2041 taatattctg ggcatgcagg cgcacgattg ggaagcggga aaccttgatg caagtacaac
     2101 ttcagaagac acaccttcaa attattcagg atatgatgct gtaaaccgct atggagatga
     2161 ggtgcttaca ggtggtaatg actacagtgg gaacccaatt acttttcccg gtttaggaag
     2221 aatttacaga accgggtata tggaaaagaa tattgttgac tatgatacga agaacgttaa
     2281 aaccaatatc ggactgtatt acaaaattac cgataaaata gaaatcaact atggatttaa
     2341 ttatagtttt ggaacaacag tatatcaggg tgataatagg tatagcttaa aaaatattca
     2401 attttttcag aataaactcg aaataggtca acctgataaa tttttcgtaa gggcttacat
     2461 gacccatgaa gatgcaggtg attcatacga tgctgttgtt accgcttttg aagtggagaa
     2521 tgcagccaaa aaagaaggcg ttttttataa agattattcc tcctattatc aaacctttat
     2581 tgttccgcgt atgtatgatg ccggattacc tacaaatgag gaaaacagac ccaatctcgg
     2641 agagatactt gccacatgtg ggtgtactat tgaggaagct ttaatcattt ttggtgaagc
     2701 aaaccttgaa tggcaagcag caactgttgg tcttcaagat gattggattg gccaaaataa
     2761 agatagtatg ttagtttggc atgccgaaac acgtgaattc tcagataatg ctacagcctc
     2821 cgagtctgag catccttttt ttgaaccggg tacccaacgt tatgattcat tgttaaacgt
     2881 tataacatcc cgtctattta ccgagggggg atcgaggttt tatgataaat cctcactcta
     2941 taatatcgat gggcaatatc agtttaaagc aggaccggta gggtttactt taggtggtaa
     3001 ttatcgcctt tatacccccg tttcaaaagg aaccatattt gcagatactg caggcataaa
     3061 aattaccaac tggaatatag gag
//
LOCUS       DASCQP010000356         3934 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001305455, whole genome shotgun sequence.
ACCESSION   DASCQP010000356 DASCQP010000000
VERSION     DASCQP010000356.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3934)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3934)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3934
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001305455"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1803)
                     /locus_tag="QF480_06050"
     CDS             complement(<1..1803)
                     /locus_tag="QF480_06050"
                     /inference="COORDINATES: protein motif:HMM:NF019317.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HDIG domain-containing protein"
                     /protein_id="HJN06159.1"
                     /translation="MSPKESMFKYEFQIGKPWSHSDLIAPFDFAILKTTEQIDTEKQQ
                     ILLDFIPYFRYDDEIAQTGETQLIENFGIAWESRSADTVDADSARFQSFLLKLYKRFE
                     SRGIIRFNKVIEGKDKFMQLRLIQGNVVAETTLGQLYDVRTAIEYANEKIKNMGVADS
                     ILLLNVISQSLVQNVIYDESKNQAEQEELLNGVSTTHGLIQKGELIISTGELVTPEKY
                     QTLISLKYDYEEDLNTSDSRMFIIAGMISLVSLMFLVQYLFIKFYRKRFYDQIKYIVL
                     ILLSQLIFIVISDFVFITFPNWTYLIPFALLPIVISAFLDAGIAIFVYLVTLMLLGFY
                     APNSFEFFYTQAIVGLIAVFSVKKLSKRSDLFRATLLVFLTYFLVYISMMLIQEGNLD
                     SFSWRLLAYFGGSSILILLAFPLIFIFEKLFGIITQLTLLELSNTNNPLLRDLSIKAP
                     GTFQHSLQVANLASEVLYEIGGDALLARTGALYHDIGKMKNPMYFVENQVAGYNPHDE
                     LSFEVSAKIMIEHVLGGIEMARKEPIPEQIIDFIRTHHGTRRVEYFYKLERKLNPGME
                     IDQSEFTYHGPAPFTKETAVVMMADSVEAASRSIS"
     gene            1982..2770
                     /locus_tag="QF480_06055"
     CDS             1982..2770
                     /locus_tag="QF480_06055"
                     /inference="COORDINATES: protein motif:HMM:NF013073.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HJN06160.1"
                     /translation="MKYGICELSIVPVRKHPSDQSEMINQLIFGDLVIIIDIKDNWFL
                     INTSHDGYEGWVDEKQFTLIGKHQFERLNDDETVFFSDICGKATTQNGKSINLVLGSR
                     LPNYQNNSITIIDNKYSVIGNIQTDIPEPTGNNLIEIARKYIGAPYLWGGRSPFGIDC
                     SGFTQVVFGMIGVPLKRDSQQQVEVGETINFVNEAKAGDLAFFDNADEKITHVGIIID
                     NKQIIHASGEVRIDTIDHQGIYNEKRKIYTHKLRIIKRIIVDPK"
     regulatory      2979..3103
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00050"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="FMN riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="flavin mononucleotide"
                     /db_xref="RFAM:RF00050"
     gene            3228..>3934
                     /locus_tag="QF480_06060"
     CDS             3228..>3934
                     /locus_tag="QF480_06060"
                     /inference="COORDINATES: protein motif:HMM:NF019335.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HJN06161.1"
                     /translation="MNKKITLLIAIICFTTSTFAQFVITGKILDQETLTPIHNVNIRV
                     EDQTAGTTSSSDGTFILEVKKDKVYLILTSIGYKQNSFNLKISKGREIDLGAITMQPQ
                     PYSIDEITVNAGLSNEVELPLSISSISARSIETKLGDRPLPLVMQTVPGVFSIRDGGG
                     SGDAKLSIRGFQQENVSLLLNGIPINGEENGLVYWSNWLGRGNAAAEIQIQKGPGLTN
                     ASIYSIGASVNIITRNA"
BASE COUNT         1358 a          681 c          667 g         1228 t
ORIGIN      
        1 tgaaatactt cttgatgcag cttcaactga atcggccatc attacaacag cggtttcttt
       61 tgtaaacgga gccggaccat gataagtgaa ctcactttga tctatttcca ttccaggatt
      121 tagtttacgc tcaagcttat agaaatactc gaccctacgt gtgccatgat gtgtacgaat
      181 gaaatctata atttgctcag gaatgggttc tttccgggcc atttcaattc caccgagtac
      241 atgctctatc ataattttgg cacttacttc gaaacttaat tcatcatgag gattatatcc
      301 agctacctgg ttttcaacaa aatacatcgg attcttcatc tttccaatgt catgatacaa
      361 tgctcctgta cgagcgagta atgcatctcc acctatctcg tacaacacct cagatgcaag
      421 attagcaacc tgtagtgaat gttgaaatgt tcctggtgct tttatactta aatcacgcaa
      481 tagcggatta ttggtatttg aaagttccaa caaggtaagt tgtgttataa taccaaacaa
      541 tttctcgaaa ataaaaatca acggaaaagc aagtaaaata agaatagagc tgcctccaaa
      601 atatgctaat aatcgccagg agaaactatc aagattgcct tcctgtataa gcatcatgct
      661 aatgtaaaca aggaaatatg ttaaaaaaac cagcaaagtt gccctgaata aatcagatcg
      721 tttgcttaac tttttaaccg agaacaccgc tattaatcca acaattgcct gagtatagaa
      781 aaactcaaaa ctgtttggtg cataaaaccc aagtaacatt aatgttacca aataaacaaa
      841 tattgcaatt ccagcatcca gaaaagcaga aataacaatt ggcaatagtg caaaaggtat
      901 taaataggtc cagtttggaa atgtaatgaa tacaaaatcg gaaataacaa taaatatcaa
      961 ttgtgataat agtatcagta cgatatattt aatttgatcg taaaaccttt ttctgtaaaa
     1021 cttaataaac aaatattgaa ctaaaaacat aagggataca agcgaaatca tacctgcgat
     1081 tataaacatt ctcgaatcgg aagtgtttaa atcttcttca taatcatatt ttaatgaaat
     1141 aagggtttga tacttttccg gtgttacaag ttcgccagtt gaaatgatta gctcaccttt
     1201 ttgaataagg ccatgggttg tagatacacc attaagtaat tcctcctgct cagcttgatt
     1261 cttactttca tcataaatta cattctgaac aagcgactga gatattacat taagtaacaa
     1321 tatactatct gcaacaccca tatttttaat tttttcatta gcatactcga tagcggtcct
     1381 aacatcataa agttgcccca aggtagtttc agcaacaaca ttaccctgta taagccggag
     1441 ttgcatgaat ttatcctttc cttcaattac tttgttgaat cgaatgattc cccggctttc
     1501 aaatcgctta tataatttta acaaaaaact ttgaaatcgt gcagaatctg catctacagt
     1561 atcggctgag cgcgattccc atgcaattcc aaaattctca attaattgtg tttcacctgt
     1621 ttgagcaatt tcatcatcat atctaaaata tgggataaaa tctaataaaa tctgctgttt
     1681 ttctgtgtct atttgctcag ttgttttaag tattgcgaaa tcaaagggtg caatcaagtc
     1741 gctatgactc caaggtttac ctatctggaa ttcgtactta aacatactct ctttagggct
     1801 cacccacagc actattacaa ttgccaaaat aaaaatgagc acctttaata tctcgtaata
     1861 attatgttgt atttttgaaa aaagtgaatg catgttactt catttgacga aacaaattta
     1921 atcaaaagaa caaacgttgt tagttagtaa taaattataa aatatatttt ttgagccaat
     1981 gatgaaatat ggtatttgtg agttatcgat tgtccctgtc agaaaacatc cttctgatca
     2041 aagtgagatg attaaccagc tgattttcgg cgatttagta attatcattg atattaaaga
     2101 caattggttt ttaattaaca catcacatga tggctacgaa ggttgggtcg acgaaaaaca
     2161 atttacatta attggaaaac accaatttga aagattaaat gatgacgaaa ctgtattctt
     2221 ttctgatatt tgtgggaaag caactacaca aaacggtaaa tcaataaatc tcgtgttagg
     2281 tagtcggtta ccaaattacc aaaacaattc aattacaatt attgataata aatattctgt
     2341 aataggaaat attcaaacag acattcctga acccaccgga aataatctta tagaaattgc
     2401 tcgaaagtat attggtgctc cgtatttatg gggaggtaga tctccatttg gtattgattg
     2461 ctcaggattt acacaagtcg tttttggcat gattggcgta cctttaaaac gtgattctca
     2521 gcagcaggtt gaagttggtg aaactattaa ttttgtaaat gaagcaaagg caggcgatct
     2581 tgcatttttc gataatgcgg atgaaaaaat aacacatgta ggtattatta ttgataataa
     2641 acaaataatt catgcttccg gtgaagttag aattgacact atcgatcacc aaggaatcta
     2701 taatgagaaa cgaaaaatat atacccataa gcttcggatc attaaaagaa tcattgttga
     2761 tccaaaatag aaaagttatt ttttattatt atccatgggt tagcatctga tttaaacatt
     2821 acaaaatccg tcagcataca gtctagaaaa tgcataattg attatcagaa ataactaagt
     2881 cttcatcact atttagatag gataaaaata gaaaactagc tgaagattta gttgtgtttc
     2941 tattgccatc ttaaacaaaa caaatatctt tgcatcaaca aattcttcgg ggcagggtgt
     3001 aattccctac cggcggtaat agtccgcgac tcccgttttt tacgggactg atccggtata
     3061 attccggagc cgacagttag agtctggatg gtagaagaat aggtgtattg taatgattac
     3121 cagataactg gtttaatgtc ttgctgggca acagcgctag ttattttcat tgtgatattt
     3181 ttattatgcc ccgtgtaatt cggataaaca ataaaaatat taaatcaatg aacaaaaaaa
     3241 tcacattact tatcgctatt atctgcttta cgacgagcac atttgcacag tttgttataa
     3301 ctggaaaaat ccttgatcaa gaaactctca ctccaattca taatgtaaat attagagttg
     3361 aggatcaaac tgcaggaacg acatcatcat ctgatggaac atttattcta gaagtaaaaa
     3421 aagataaagt ctatctaatt ttaacttcaa ttggttacaa acaaaattcc tttaatttaa
     3481 agataagtaa gggtcgtgaa atcgatttag gtgctattac aatgcaaccc caaccttatt
     3541 ccattgatga aattaccgtt aatgcaggtt tatctaatga agttgaatta ccgctaagta
     3601 tttcaagcat cagtgcaaga agcattgaga caaagctagg tgaccgccct cttccattag
     3661 taatgcaaac tgttccagga gtttttagca ttagagatgg aggtggcagt ggtgatgcaa
     3721 aattaagcat tcgtggcttc caacaagaaa atgttagttt actactaaat gggattccaa
     3781 taaatggtga agaaaacggt ttagtttatt ggagtaactg gcttgggcgt ggcaatgccg
     3841 ctgctgagat tcaaattcaa aaagggccag gacttacaaa tgcgtctatt tattcaatcg
     3901 gtgctagtgt taatataatt acacgcaatg ccca
//
LOCUS       DASCQP010000357         4471 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001314875, whole genome shotgun sequence.
ACCESSION   DASCQP010000357 DASCQP010000000
VERSION     DASCQP010000357.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4471)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4471)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4471
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001314875"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..721)
                     /gene="gcvT"
                     /locus_tag="QF480_06065"
     CDS             complement(<1..721)
                     /gene="gcvT"
                     /locus_tag="QF480_06065"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007212859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004047 - aminomethyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HJN06162.1"
                     /translation="MIKTALNNMHHDMGARMVEFVGFDMPVQFEGIVIEHETVRTKLG
                     VFDVSHMGEFWVEGPNAKALVQKVTTNDVNALSDGRVQYSCFPNGQGGIVDDLLVYRF
                     SEEKYLLVVNASNIEKDWKHISSHNDCNAVLTNASNKISQLAVQGPLALKVMQKLTDE
                     SVIDMEYYTFKVLEFAGVNDVIFSTTGYTGSGGCEIYMQNGDVEKIYKAVLEAGQEFG
                     IKPIGLGARDTLRLESGFCLYG"
     gene            891..3020
                     /locus_tag="QF480_06070"
     CDS             891..3020
                     /locus_tag="QF480_06070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004317268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HJN06163.1"
                     /translation="MKRILILVTAISFMLLTQKCQQHNTKIVYPKANKTDSVDVYFGH
                     EVSDPYRWMEDDNSEETAKWVEAENKITNKYLADIPFRGQLKERLTHIWNYPKYGVPF
                     NKGDNYFFFKNNGIQNQSVLYIQASLADEPKVLLDPNTLSEDGTVALSSLSISRNGEL
                     LAYGISRGGSDWSEIYVMNIETGEILKDHINWVKFSGISWKGEGFFYSAYDEPQEGDE
                     LSGQNRFHKVYYHILGTPQKQDLLIFEDKEKPLRNFYGYLTEDERFLIVAETESTSGN
                     ALYAAKLKELTDINFTKIAEGFDYEYQIIDNINDDLLMLTNHEAPNQKLVLTLYNNDD
                     PANWKVLIPEKETVLNNASLVGEMLFTQYLKDASSKAYFYNLDGTFVRELELPAIGTL
                     SGFNGEKNKNTAFYGFTSFTFPSSVYKYDVTAGVSEVMHKSEVDFEPENYVTNQVFYE
                     SKDGTKIPMFIVHKKGIKMDGNNPTMLYAYGGFNISLTPSFSISRSVFIEQGGIYVMA
                     NLRGGGEYGEKWHEAGTLLQKQNVFDDFVYAAKYLIKNNYTSSDKLAIIGGSNGGLLV
                     GACMTQQPELFQVAIPIVGVMDMLRYHNFTIGWAWAADYGCSDDNEEMFKYLHGYSPL
                     HNIKKGVDYPATLAITADHDDRVVPAHTFKFMATLQEANGGKNPILVRIETKAGHGAG
                     KPTDKQISEAADMYGFMMYNLGMKPEF"
     gene            3195..>4471
                     /locus_tag="QF480_06075"
     CDS             3195..>4471
                     /locus_tag="QF480_06075"
                     /inference="COORDINATES: protein motif:HMM:NF013543.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006817 - phosphate ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HJN06164.1"
                     /translation="METVYLVIVVVLFLLAASDLIVGVSNDAVNFLNSAVGSKVASFK
                     VIMLVAAIGILIGAVFSSGMMEVARKGIFNPGQFYFSEIMIIFMAVMVTDVLLLDAYN
                     TWGLPTSTTVSIVFELLGAAVGMASIKLLISDGGMTIGQFINSSKALAIISGILLSVG
                     VAFSVGAIIQYLTRIAFSFNFKKRIKYIGAIWGGIAFTALTYFILIKGAKGASFMSVD
                     AKEWIKENSLIIIFYSLIGWTILLQLLYWIFRINILKIIVLVGTFSLAMAFAGNDLVN
                     FIGVPIAGFNSWEIFQNSQGAAPDGFLMTALGGKVPTPEIFLLLAGGIMVLTLYLSKK
                     ARSVLKTSIDLSRQDEGEERFKATWISKALVRSSLHASNNIKRALPGSFVGIIEKQFE
                     PIKEKKIEKAPPAFDLIRASVTLTVASVLIAFGT"
BASE COUNT         1474 a          753 c          818 g         1426 t
ORIGIN      
        1 taccatacag acaaaaacca gattcgagac gtaatgtatc acgtgcaccg agcccaattg
       61 gtttaatacc aaactcctgc cctgcttcca atacagcttt gtaaattttc tctacatctc
      121 cattttgcat atatatttcg catccaccag aacctgtgta cccagttgtt gaaaaaatga
      181 catcgtttac acctgcaaat tctagtacct taaaagtata atattccata tcgatgacgg
      241 attcatcagt taacttctgc attaccttaa gtgcaagagg cccctgaact gctaactgac
      301 ttatcttatt tgaagcattt gtcaaaacag cattgcaatc attatgacta ctaatgtgct
      361 tccagtcttt ttcaatattt gaagcgttaa ccactaataa gtatttctct tcactaaatc
      421 tataaacaag caaatcatca acaattcctc cctgtccgtt aggaaaacaa ctatactgaa
      481 cccttccatc actaagtgcg ttaacatcgt tagttgttac cttttgaaca agtgctttag
      541 catttggtcc ttccacccaa aactcaccca tatgtgaaac atcaaagacc ccaagttttg
      601 tccttactgt ctcgtgttca ataactatac cttcaaactg aacaggcata tcaaagccaa
      661 caaattcaac cattctagcg cccatatcat gatgcatatt atttaaagct gtctttatca
      721 tttataaagg ttttaaaagc cgcgaaatta atgaaaaaga aattataata ctcatgcgat
      781 agctaaatca gttaacacaa aaaaagttca tttgcgattt gtatatttca actaacctac
      841 atacttttac tggcttgata aattttttac gcaaccaaaa attattaact atgaaacgaa
      901 tattaatatt agtaacagca ataagtttta tgctacttac tcagaaatgt caacaacata
      961 atacaaaaat tgtttatcct aaggcaaata aaactgatag tgtcgatgta tatttcggac
     1021 acgaagtgtc tgatccctat agatggatgg aagacgacaa ctcagaagaa actgccaaat
     1081 gggtagaagc cgaaaacaaa attactaaca aatatcttgc agatattcca tttagaggac
     1141 agcttaagga gcgattaacc catatttgga attaccctaa atatggagtt ccttttaata
     1201 aaggtgataa ttactttttc tttaagaata atgggattca aaatcagagc gtactttata
     1261 ttcaagccag tcttgctgat gagccaaaag tattgcttga ccctaatacc ttatccgagg
     1321 atggaactgt tgcattatca tcattaagta tttcaagaaa cggcgaacta cttgcttatg
     1381 gaatttcacg cggaggttct gattggagtg agatttacgt catgaatata gaaacaggtg
     1441 aaattttaaa agatcatata aactgggtta aattctcagg aattagctgg aaaggtgaag
     1501 gattctttta ttcagcatat gatgaaccac aagaagggga tgaactttca ggtcaaaacc
     1561 gctttcacaa ggtttactac catattcttg ggacccctca aaaacaagat ttgctaattt
     1621 ttgaagataa ggaaaaacca ttaaggaatt tttatggcta cttaacagag gatgagagat
     1681 ttttaatcgt tgccgaaact gaaagcacaa gtggtaatgc attgtatgca gcaaaactta
     1741 aggagttaac agatattaat ttcactaaaa ttgcagaagg atttgattat gaatatcaga
     1801 taattgataa tattaatgac gatttgctaa tgttaacaaa ccatgaagca cctaatcaga
     1861 aactagtgct tactctttat aataatgatg atcctgcaaa ttggaaagtc cttattcctg
     1921 aaaaggaaac tgttcttaat aatgcatcgt tagttggtga aatgctattt acacaatatt
     1981 taaaagacgc aagtagtaaa gcttattttt acaatctcga cgggacattt gtaagagagt
     2041 tggaactacc tgcaatagga acattatcag gctttaatgg tgaaaaaaat aaaaacacag
     2101 ccttttacgg ttttacatca tttacattcc cttctagtgt ttacaagtat gatgtaacgg
     2161 caggagtttc agaagtgatg cataaatcgg aagttgactt tgaaccagaa aattatgtta
     2221 caaaccaggt attctacgaa agtaaggacg gcaccaaaat acctatgttt attgttcata
     2281 aaaagggaat aaaaatggat ggtaacaatc caaccatgct ttacgcatat ggcgggttta
     2341 acattagtct tacaccaagt ttcagtatta gccggtctgt ttttattgaa cagggtggaa
     2401 tttatgtgat ggcaaattta agaggtggtg gtgaatacgg tgagaaatgg catgaagcag
     2461 gaactctgtt acaaaagcaa aatgttttcg atgattttgt ttatgcagca aaatatctca
     2521 tcaaaaataa ttacacttca tctgataaac ttgcaataat tggtggatca aatggagggt
     2581 tacttgtggg agcttgtatg actcaacaac ctgaattatt tcaagttgct attccaattg
     2641 ttggtgtcat ggatatgctt cgttaccata attttactat tggctgggcc tgggctgcag
     2701 attatgggtg tagcgatgat aacgaagaaa tgtttaaata tctacatggt tattctccat
     2761 tacacaatat aaagaaagga gttgactacc ctgctacact tgcaataaca gctgatcatg
     2821 atgaccgagt tgtacctgca cacaccttta agtttatggc tactcttcaa gaagctaatg
     2881 gtgggaaaaa tcctatttta gtcagaatcg aaactaaagc tggtcatggt gctggcaaac
     2941 ccactgacaa acaaattagt gaagctgctg atatgtatgg ctttatgatg tataaccttg
     3001 gaatgaaacc tgagttttag aggaattatt aattaataat agaatgcata aatgcttaaa
     3061 tgatggaatg atagaatgtc aacatttaag catttattcc ttgaacctga aacttaacaa
     3121 tttgttaata ttgtaatcat ccatccaatt attagtttgt ataatcttgc aagatatatt
     3181 taaactaata aaaattggaa actgtatatc tagtaattgt tgttgtatta ttcttattag
     3241 ctgcttcaga cttaattgta ggtgtaagta acgatgctgt taacttctta aattcggcag
     3301 ttggatcaaa agttgcttct ttcaaagtaa taatgcttgt tgctgcaatc ggaatattga
     3361 ttggagcagt cttctcaagt ggcatgatgg aagtagctag aaagggtatt tttaatcccg
     3421 ggcagttcta tttcagcgag ataatgataa ttttcatggc tgtaatggta acggatgttc
     3481 ttttgctgga tgcatataat acttggggat tacctacgtc aacaaccgtt tctattgttt
     3541 ttgagttatt gggtgcagct gtaggtatgg cttctatcaa gctattgatt agcgatggtg
     3601 gtatgactat tggccagttt attaactctt caaaagctct tgcaattatt tcaggtattc
     3661 tcctgtcagt tggtgttgca ttttcagttg gggcaataat tcagtattta accaggatag
     3721 cgttctcatt taattttaaa aaacgtatta aatatattgg agcaatttgg ggtggaatag
     3781 catttactgc actaacttat tttatcctta taaaaggtgc caagggtgct tcttttatgt
     3841 cagtagatgc taaagaatgg ataaaagaaa atagtcttat tattattttt tatagcttaa
     3901 ttggctggac gattttactt caattgctat attggatttt ccgaataaat atattaaaga
     3961 ttattgtatt agttggtacg ttttcgcttg ccatggcatt tgcaggaaac gatttggtaa
     4021 actttattgg tgtacctatt gcaggtttta attcatggga gatattccaa aactcgcagg
     4081 gtgcggctcc tgatggattt ttaatgaccg ctttgggagg taaagtacct acgccagaaa
     4141 tatttttatt gttagctgga ggaataatgg tacttacact ttacttatca aaaaaagcaa
     4201 gatcagtgct taaaacatct attgacctta gccgacaaga tgaaggtgaa gaaaggttta
     4261 aagcaacatg gatttccaaa gcacttgtac gctcctcctt gcatgcctca aacaacataa
     4321 aacgggcact tccgggttca ttcgttggga taattgaaaa gcagttcgag cctataaaag
     4381 aaaaaaagat agagaaggcc ccacctgcat tcgaccttat aagagcatca gtaaccctta
     4441 ccgttgccag tgtactcatt gcttttggta c
//
LOCUS       DASCQP010000358         2805 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001316409, whole genome shotgun sequence.
ACCESSION   DASCQP010000358 DASCQP010000000
VERSION     DASCQP010000358.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2805)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2805)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2805
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001316409"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1543)
                     /locus_tag="QF480_06080"
     CDS             complement(<1..1543)
                     /locus_tag="QF480_06080"
                     /inference="COORDINATES: protein motif:HMM:NF037660.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HJN06165.1"
                     /translation="MKLPSKILLIIITLGSVFNAVSQSNFVTDSLLKELENTHKVIDK
                     IDLYSALSARHKDIDLNKAKDFAKNALILAEKTNTISKLGIIYTYLGEFALLEDSITV
                     AEEMFKKAEEYLTTTNNPKELISVYLLIGNRYIEKDNYAEAMKYYMKGIETSEMNNEK
                     SKLPNLFNNLGVVYLNINYPEKALDLYSQALKLFEEARDTMNVAGTTTNIGSIYIQLG
                     QNDIAETYYQTGYKLFNDFGSIEGMAHSQLKLGLLDMLEQNYDSAAVHLSNSLKIQKE
                     LEVIYSGSKSFFIAETYINYGIVLLKLHNYIKAKEYLLEGYDIAKNANQYRLIALSAK
                     YLSNYYQNQNEPNSALNYSRIFKQYSDSNYNEENVRKLTQLEMQYQFDVKLKEDELDR
                     KIQAQQQARKNLIYLIISGSLFFILIIVILLLRLEKIRKRKAELEKKNLTNKLEHTNK
                     ELTTHVMYLLRKNEFIIRIAEKLKIAKLDAKVENQKILTELIKELESNSTMISWEEFE
                     VRFQEV"
     gene            complement(1656..>2805)
                     /locus_tag="QF480_06085"
     CDS             complement(1656..>2805)
                     /locus_tag="QF480_06085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009317153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HJN06166.1"
                     /translation="GMDLINPRTSNKERISQMFLLNGKNREKVEKVSVGDIAITIKLK
                     DVRTGDSLMDQKIAKAGFEPLNLPVEIYTMALKAVNSSDDEKIGIILNEMHRTDPTIN
                     IEYSRELKQMLVKTQGEFHLNTIKWYIQNIHKIEIETASQKIPYRETITKTANADYRH
                     KKQSGGSGQFGEVYLRIMPFVEGYKKPTDIPIRGTDIHELPWGGKLIFNNSIVGGAID
                     TRFLPAILKGIMERMNEGPLTGSYARDIIVYIYDGKMHPVDSNEISFKLAGRFAFSQA
                     FKTAGPKIMEPINDVEISVPEDMMGAVMTDLQGRRGIIMGMDSKGRNQIIRAKIPAAE
                     MTRYATSISAITSGRGTFSSNFDEYQQVPSDVQEQLLKTYEESQQEEE"
BASE COUNT          797 a          498 c          448 g         1062 t
ORIGIN      
        1 atacttcttg aaacctaact tcaaattctt cccacgatat catcgttgaa tttgactcaa
       61 gctctttaat gagttcggtg agaatttttt ggttttctac tttggcatcg agttttgcaa
      121 ttttgagttt ttcagcaatc ctgattataa actcattttt tcggagcaaa tacatgacat
      181 gtgtggtcag ttctttattt gtgtgctcca atttgttggt tagattcttt ttctcaagtt
      241 cagcttttcg ttttctgatt ttttcaagcc ttaatagtaa aatgacgata atgaggataa
      301 aaaataaact tccgctaatt attaaatata ttagattttt tcgtgcttgt tgttgggcct
      361 gaatttttct gtcgagttca tcttctttaa gttttacgtc aaactggtac tgcatttcca
      421 gttgggttag ttttctaaca ttttcttcat tgtaatttga gtctgaatat tgcttaaata
      481 ttcgactata atttaatgct gaatttggct cattttggtt ttggtaatag ttgctcaaat
      541 atttagccga aagtgcaatt aggcggtatt gattggcgtt tttagcaata tcgtatcctt
      601 caagcaagta ttcttttgct ttaatataat tatgaagttt aagtaaaact attccatagt
      661 ttatatatgt ttcagcaatg aaaaaggatt ttgatcctga ataaattact tcaagttcct
      721 tttgaatttt taagctattt gacaaatgca ctgctgcact atcataattt tgctctaaca
      781 tatcaagaag cccaagcttt agctgagaat gggccattcc ttcaatactt ccaaaatcat
      841 taaacaactt atagcctgtt tgataatatg tttcagcaat gtcgttttgt cctaattgga
      901 tgtaaataga accgatatta gtagttgtgc cagcaacgtt cattgtgtct cgtgcttctt
      961 caaagagctt taacgcttgt gaatacaggt caagtgcctt ttcagggtag ttaatattta
     1021 aataaaccac accaaggtta ttgaacagat ttggtaattt gctcttttca ttattcattt
     1081 ctgaagtttc tatacctttc atgtagtatt tcatggcctc ggcatagttg tctttttcaa
     1141 tgtacctgtt tccaattaat aagtacactg aaattagctc ttttggatta tttgtggtag
     1201 taaggtattc ttcggctttt ttaaacatct cctctgccac tgtaatacta tcttctaaca
     1261 atgcaaattc tcccaaatac gtatatataa ttcctagttt tgaaatagta tttgttttct
     1321 cggctaagat gagtgcattt ttggcaaaat ctttagcttt atttagatcg atatctttat
     1381 gtctagcact aagagcacta tagaggtcta ttttatcaat tactttgtgg gtattttcaa
     1441 gttcttttaa aaggctgtca gttacaaaat tggattgaga aactgcatta aatactgaac
     1501 caagggtaat aattattaaa agtattttag aagggagttt cattaatttt cctttaacct
     1561 caattgtaac aaatgtaagg ataatttcgg atgcatgaaa aaagggattt acagatataa
     1621 acctacaaac cccttttcaa tcaaattaaa ataatttatt cttcttcttg ctgagattct
     1681 tcgtaggttt taagtagttg ctcctgaaca tcagaaggta cttgttgata ctcatcaaaa
     1741 ttggaggaaa aagtacctct acctgatgta atagcactta tcgaagtagc atacctggtc
     1801 atttcagctg caggtatttt agctctaata atctgatttc gtcctttaga atccataccc
     1861 ataataattc cacgacggcc ttgcaaatca gtcataacgg cacccatcat atcttcaggt
     1921 acactaattt caacatcatt gatgggttcc attatctttg gtcccgcagt tttaaaagcc
     1981 tggctaaatg caaaacgacc agctaactta aatgagattt cgtttgagtc gacgggatgc
     2041 attttaccat cgtaaatata tactataatg tcacgtgcgt aagaaccagt taacggacct
     2101 tcattcattc gctccattat accttttaag atagctggaa gaaagcgagt gtcaatagct
     2161 cccccaacaa tactgttgtt aaatattaac ttcccacccc atggtaattc atgaatatct
     2221 gttccacgta ttggaatatc tgttggcttt ttgtaacctt caacaaatgg cattatcctt
     2281 aagtaaactt ctccaaactg ccctgaacca cccgattgtt ttttatgtcg gtagtcggca
     2341 ttagcagtct tagttattgt ttccctataa ggtatctttt gtgaagcagt ttcaatttca
     2401 attttatgta tgttttgtat ataccacttt attgtgttta aatgaaactc accctgtgtt
     2461 ttaactagca tctgctttaa ctcccgtgaa tattcaatat ttatagttgg gtcagtgcga
     2521 tgcatttcgt ttagaattat gccaattttt tcgtcgtcag aactattaac tgccttcaaa
     2581 gccattgtat aaatttcaac tggtaggtta agaggttcaa accctgcctt tgcaattttt
     2641 tgatccatca gtgaatcacc agttctaaca tctttcaatt ttatagttat agctatatcg
     2701 ccgacactaa ctttttcaac cttttcgcga tttttaccgt tcaacagaaa catctgtgaa
     2761 attctttctt tgttagatgt tcttggatta attaggtcca tacct
//
LOCUS       DASCQP010000359        12678 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001318457, whole genome shotgun sequence.
ACCESSION   DASCQP010000359 DASCQP010000000
VERSION     DASCQP010000359.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 12678)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12678)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12678
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001318457"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1033
                     /locus_tag="QF480_06090"
     CDS             <1..1033
                     /locus_tag="QF480_06090"
                     /inference="COORDINATES: protein motif:HMM:NF013691.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004527 - exonuclease activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="exonuclease domain-containing protein"
                     /protein_id="HJN06167.1"
                     /translation="IYERRTLDTVKLSRKLIPGRKSYGLGRLCKDLEIVNHARHRASG
                     DAMATTKLFESLLSIDSNPESINLNGVQTDVNRSLVKDLPSETGVYYFYDRSKELIYV
                     GKSINIHDRILSHINNNLNSKAIEMKNLLADVSFNITGSELIALLLESHEIKKNQPRF
                     NQSQRRTYFNYGLYSFIDEFSYINLKIIRIIDELNPLYTYSSAQEGKEHLAMLCDEFN
                     LCQKLCGLYDTSGACFHYQISSCNGACINEESSSSYNLRVSEALENYQFKQQNFFVVD
                     EGRNDDEKSVVKVENGKYVGFGYLGKDQFSSDISLLHDCIVRYRDNKEVRRIINSHLK
                     KTKCKIIEY"
     gene            complement(1052..2701)
                     /locus_tag="QF480_06095"
     CDS             complement(1052..2701)
                     /locus_tag="QF480_06095"
                     /inference="COORDINATES: protein motif:HMM:NF012706.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HJN06168.1"
                     /translation="MKVKNTYFHIVAVLILIFLISCTDKQNNSEKSVFTYNEAAGIIS
                     LDPAFSRDLAHIWICNQLYNSLVKLNDSLEVAPSIARNWEISEDGLNYTFNLRTDVFF
                     HKDSSFKGASRKVVASDFVYSFNRLLDPKTASPGAWVLSNVKKKNNSYAIYALNDSTL
                     HIEISKPFPPFLGILSMKYCSVIPHEAVEFYGADFRKHPVGTGPFKMQNWIENIKLVL
                     RKNPDYFEKYNGEQLPFLDGVAVSFLIDKMTAFMEFVKGNFDFISGIDPSYKDELLTR
                     SGQLKSKFSNRFNMIEGSYLNTEYLAILVDTALSNEKENPLQNKNVRLAINYGFDRQK
                     MIHYLRNGIGTPGKKGIIPAGMPSFDSNAGYGFSYNPDKSKKLLKDAGYSIDNPVPEI
                     TLVTTPDYLDLCKFIQSQLKNIGLKIAIEVSPAATVRELKAHGKLNFFRASWIADYPD
                     EENYLSMFYSENFAPNGPNYTHFSDSIIDMLYLSSFSINEKDKRTNKYRIIDSLIMEE
                     APVAVLYYDKVVRFVQKDITGMTINPINMLNLERVKKQSGN"
     gene            complement(2713..5151)
                     /gene="lon"
                     /locus_tag="QF480_06100"
     CDS             complement(2713..5151)
                     /gene="lon"
                     /locus_tag="QF480_06100"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013613249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HJN06169.1"
                     /translation="MDKIIGLTDIVDTETEFFPLLSTEDEEMMNAEDVPDELAILPLR
                     NTVLFPGVVIPITVGRDKSIKLIKEAYQGNKTIGVVAQKDSEVEDPKFDDLQKTGTIA
                     RLIKILQMPDGNTTAIIQGKKRFEITEITQSEPYYKAKIISLEYKSKIPDDKNFSALI
                     SSVKDLSIQIIEKSPAIPSEAVFAINNIESPVFLLNFISSNLNVENKAKQELLEMTDL
                     DNRANKVLEIMTKELQLLELKHDIQSKVKVDMDKQQRDFLLNQQLKTIQDELGGGPHD
                     NEIRELNEKASKKLWSGEVAEVFKNEMVKLLRMNPAAAEYSIQLGYLDLFVELPWNEF
                     SKDNLDLKHALKVLNDDHYGLEEIKDRIIEHLAVLRLKDNMKSPILCFVGPPGVGKTS
                     LGKSIANALGRKFVRMSLGGVRDEAELRGHRKTYIGAMPGRIIQSLKKIKTSNPVFML
                     DEIDKVSGSNYSGDPQAALLEVLDPEQNNSFYDNYLEVEYDLSNIMFIATANTLATVH
                     PALRDRMEIINLTGYILEEKIEIAKRHLLPKQLIEHGVKSSQVKFKNSILEKIVDDYT
                     KEAGVRHLEKQIAKVIRNRAKFIAMDETYESKLSINLLNDILGVPIFQKDKDITNNVA
                     GVVTGLAWTAVGGEILFIEVSLSKGKGELKLTGNLGDVMKESASLAYEYLKAHHQIVG
                     LEPEVFKNWNVHIHVPEGATPKDGPSAGITMLTALASAFTQRKVKANLAMTGEITLRG
                     KVLPVGGIKEKILAAKRAKIKEIILSKENRRDIEEVKDEYIKGLEFKYVDNMLEAIDH
                     ALLQVKVNNPLLIN"
     gene            complement(5357..6532)
                     /locus_tag="QF480_06105"
     CDS             complement(5357..6532)
                     /locus_tag="QF480_06105"
                     /inference="COORDINATES: protein motif:HMM:TIGR03991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GlmU family protein"
                     /protein_id="HJN06170.1"
                     /translation="MNYILFDGQERNKLLPFTFTRPVAEIRTGILTIKEKWETFLNSK
                     VSYRTKEYLSNKYPTIISDENIFINGSVFPTGDLIEQINHLLPGQVLIKEKVEIAVRP
                     QADNFNNIFNTDYQVIRVTSDFLQIENTWDIFTINPQAIADDFVILTRNQSSQPISDT
                     NFIIGDSDKIFIEEGSKVEFVYLNTTDGPIYIGKDAEIMEGSKIRGPFALCDHSVVKM
                     GAKIYSGTTIGPHSKVGGEINNSVILGYSNKGHDGFLGNSVIGEWCNLGADTNTSNLK
                     NTYDNVRLWSYDSNTFVNTGLQFCGLIMGDHSKSGINTMFNTGSVVGVSSNIYGSGYQ
                     RNFIPSFMWGGVHGLKPYNFKKSVEVAKAVFARRNMEFNQLEEDMFKHVYGLVHNNK"
     gene            complement(6773..7039)
                     /locus_tag="QF480_06110"
     CDS             complement(6773..7039)
                     /locus_tag="QF480_06110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009596455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L31"
                     /protein_id="HJN06171.1"
                     /translation="MKKDIHPKNYRFVVFKDMSNDYSFITRSTANTKDKIVWEDGKEY
                     PMVKLEISNKSHPFFTGKMKLVDTAGRVDKFKSKYKKHFDKKDS"
     gene            complement(7195..8256)
                     /locus_tag="QF480_06115"
     CDS             complement(7195..8256)
                     /locus_tag="QF480_06115"
                     /inference="COORDINATES: protein motif:HMM:NF017686.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003995 - acyl-CoA dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0008218 - bioluminescence [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA reductase"
                     /protein_id="HJN06172.1"
                     /translation="MVSLKKRITAFASLEDMLLEVGENYHQKVHTSAQLNKLENAVKE
                     AVNYNGWFIEDNVRYMLSSVGRSLSKANIEKWIKPYEQGLGSNSSDKKIGVVMAGNIP
                     VVGFHDFLSVLISGNMIKAKLSADDSILLPIISELLIDIESGFKGMIEFTDNQLKDFD
                     AIIATGSNNTSRYFEYYFGSYPHIIRRNRNSIAVLTGKESKKDLNQLAEDIFMYFGLG
                     CRNVSHIMLPKGYELTGLLETCSLNEKINQNHKYFNNYEYNKAIYLVNGTNHYDSGNL
                     LFTENSSYSSPVSVINISHYTDINSVNRLLEVNNSKIQCVVSISKEITNSISPGNSQK
                     PQLWNYADGIDTLKFLINL"
     gene            complement(8319..8909)
                     /locus_tag="QF480_06120"
     CDS             complement(8319..8909)
                     /locus_tag="QF480_06120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06173.1"
                     /translation="MCSFILQAQTNLFDNTQNNSYLRNSKPQMSASLTTSFTSFGQGV
                     NSISTSFMPQITFPISNKFSLSTGIGYSTFFIGNGNESLFHSNQSNYGHIFVSGNYFV
                     NEKITLRGTAYKTFMIGSPSPNSETASPFYDFSTQGIIMDVEYKVTDNFRVNVGFEYR
                     QQDYPIYGPGMDHLSPQMNGLAPFPGFNPSNNLHPF"
     gene            complement(9036..9686)
                     /locus_tag="QF480_06125"
     CDS             complement(9036..9686)
                     /locus_tag="QF480_06125"
                     /inference="COORDINATES: protein motif:HMM:NF016232.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HJN06174.1"
                     /translation="MAKKHKILNLIETGEGKQLDFKFEVSDAAKIARSLVSFANTSGG
                     KLLIGVKDTGEISGIMSEEELFMIENAAAKYCIPQVPFSYKEWHLNGKKILEINIVKS
                     TNAPHKTPDQNGRLKAYVRIQDQNKLANGIQMKIWEKLNPQRDIKFVYSENAKKLLNM
                     LGKYDSLPLKQIVSKLSLSRFKIENMIAELIIMRVINMTVTESITSFSLRDPLDDD"
     gene            complement(9731..10198)
                     /gene="pyrI"
                     /locus_tag="QF480_06130"
     CDS             complement(9731..10198)
                     /gene="pyrI"
                     /locus_tag="QF480_06130"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009127487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004070 - aspartate carbamoyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase regulatory
                     subunit"
                     /protein_id="HJN06175.1"
                     /translation="MDIKRKELKVSAIRNGTVIDHIPSDKSFQVIKILNLDTSNKQIY
                     FGTALESKKFGTKGIIKISNKYFKDEEISKIALVAPSATLIEITDYEVTKKGKVHLPE
                     YVEKIVKCFNPKCVTNIQDIKTKFKVFEDFNGEMKLDCHFCEKTMKKENIEFY"
     gene            complement(10218..11135)
                     /gene="pyrB"
                     /locus_tag="QF480_06135"
     CDS             complement(10218..11135)
                     /gene="pyrB"
                     /locus_tag="QF480_06135"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009137638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004070 - aspartate carbamoyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase"
                     /protein_id="HJN06176.1"
                     /translation="MNDLKGRSLVSITDYSKEEIIHILDLAEEFEKNHRQNILDGYVI
                     GSLFFEPSTRTRLSFESSVQYLGGSIIGFASADTSSVKKGESLKDTILTVSNYSDLIV
                     MRNPMDGSARYASEVSPVPIINAGDGANQHPTQCLLDLYSIRKTQGRLEDINIAMVGD
                     LKYGRTVHSLVQALSLFGATFHFVSPDSLKMPSSVKTWIKKADLKYHQYTDMMDVMPI
                     ADILYMTRIQGERFPDPLEYEKVKNSYILENSMLEDTKDNMKVLHPLPRVNEITEDVD
                     NNPKAYYFQQAKNGVYVRQALIATILGLK"
     gene            11478..11927
                     /gene="smpB"
                     /locus_tag="QF480_06140"
     CDS             11478..11927
                     /gene="smpB"
                     /locus_tag="QF480_06140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018336022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HJN06177.1"
                     /translation="MQNNIRIKNKRVSWEYFLTEKVVAGIVLTGTEIKSIRMGKASLA
                     DSYCYFDEGELFVRGMHITEYSYGTYNNHLAKRDRKLLLTSRELKKLNVKVKEKSMTI
                     IPVVLFINDRGLAKLEIAVAKGKHFYDKRNTLKEKDHKREIDRHLKK"
     gene            complement(11929..12381)
                     /locus_tag="QF480_06145"
     CDS             complement(11929..12381)
                     /locus_tag="QF480_06145"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008861138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0052717 - tRNA-specific adenosine-34
                     deaminase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside deaminase"
                     /protein_id="HJN06178.1"
                     /translation="MKQAIELAFSNVKENKGGPFGAVVVKDGRIIGQGANLVTETNDP
                     TAHAEIVAIRKAAHNIGSFHLQGCEIYASCEPCPMCLGAIYWARIDKLYYAATKDDAT
                     KADFDDSTIYKEFSLPKDQRTISSLQLMREDAIKVFEAWNESENKIEY"
     gene            complement(12413..>12678)
                     /locus_tag="QF480_06150"
     CDS             complement(12413..>12678)
                     /locus_tag="QF480_06150"
                     /inference="COORDINATES: protein motif:HMM:NF015546.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06179.1"
                     /translation="YGLSIGGCFFGESMFHLVTAASKVALWHLVDRLLIWKFDLIDVQ
                     QETEHLRSMGATSVDRKEFLHLLKNSITKESKTGSWNLPATKN"
BASE COUNT         3969 a         2232 c         2071 g         4406 t
ORIGIN      
        1 tatttacgaa agaagaacac ttgatacagt gaaactcagt cgtaaactaa ttcccggcag
       61 aaagtcatat ggcttaggaa gattgtgtaa agatctggaa attgtgaatc acgctcgtca
      121 tcgtgcttct ggagatgcaa tggctacaac aaaactgttc gaatcattac tctcgattga
      181 tagtaatccg gaatctatta acctcaatgg agtccaaact gatgtaaaca gatcgctggt
      241 taaagactta ccttcagaaa cgggcgttta ttatttctat gataggagca aagaattaat
      301 ttatgttggt aaatcgataa atatacatga caggattcta tcccacataa ataataacct
      361 taatagtaaa gcaattgaaa tgaagaattt actagccgac gttagcttca atattactgg
      421 cagtgaatta attgctttat tattggaatc tcatgaaatt aaaaagaacc agccaaggtt
      481 taaccaatct caaagaagaa catattttaa ctatggttta tattccttta tagatgaatt
      541 tagctacata aatttgaaaa ttatcaggat tattgatgaa ctaaatccat tatatactta
      601 tagctctgct caggaaggta aagagcattt ggctatgcta tgtgacgaat ttaatttatg
      661 ccagaaattg tgtggattat atgatacttc tggtgcctgt tttcattatc aaattagtag
      721 ttgcaacggt gcatgtataa atgaggaatc ttcatcatcg tacaacttaa gagttagtga
      781 ggcattagag aattatcagt ttaaacaaca gaatttcttt gttgtcgatg aaggaagaaa
      841 tgatgatgaa aaatcggttg tgaaagttga aaatggaaaa tatgtaggct ttggttattt
      901 aggtaaagat cagtttagct ctgatattag cctactgcat gattgtattg taagatatag
      961 agataataaa gaagtacggc gcattattaa ttcacattta aagaaaacaa aatgtaaaat
     1021 tattgagtat tagatcttga agaagcgata tctaattgcc tgattgtttt tttaccctct
     1081 ccagattcaa catattaatt ggatttatcg tcattcctgt aatgtctttt tgaacaaatc
     1141 ttacaacctt atcatagtat agaactgcaa caggtgcttc ttccataatt aagctatcaa
     1201 taatacgata cttatttgtt cgtttatctt tttcgttaat actgaaagat gataagtaca
     1261 acatatcgat tatagagtca gaaaagtgag tataattagg gccgttgggt gcaaaattct
     1321 cagaatagaa cattgataag tagttttcct cgtcagggta atctgcaatc catgaagctc
     1381 tgaagaaatt tagttttccg tgagctttca attcacgaac tgttgcagcc ggcgatactt
     1441 caatagctat tttcaggcca atatttttta gctgagactg aataaattta catagatcaa
     1501 gataatcggg cgttgtgacg agagtaatct ctggaacagg attatcgatg ctataaccgg
     1561 catctttcaa taatttctta gatttatcag gattataact aaaaccatat ccggcgttag
     1621 aatcaaatga tggcattcct gctggaataa ttcctttttt ccctggtgta ccaattccgt
     1681 tccttaaata atgaatcatt ttctgtctgt cgaatccata atttattgcc aatctcacat
     1741 ttttattttg taatggattt tctttttcgt ttgataatgc tgtatcaaca agtattgcaa
     1801 ggtattctgt attaaggtat gaaccctcaa tcatattaaa cctattactg aattttgatt
     1861 tcaattgccc tgatcttgtt aataattcat ctttgtatga gggatcgatt cctgatataa
     1921 aatcaaaatt acctttcaca aactccatga aggctgtcat cttatcaatt aaaaaagata
     1981 ccgcaacacc atcaagaaat ggtaattgtt ctccattata tttttcaaag taatcagggt
     2041 tttttcgaag aacaagttta atattctcga tccaattttg cattttaaat ggcccggtac
     2101 ctacgggatg ttttctgaaa tcagcaccat aaaattctac ggcttcatgt gggataacag
     2161 agcaatattt catactcaat atacctaaga aaggagggaa gggttttgat atctcaatat
     2221 ggagagtgct gtcgttcaat gcatagattg cgtagctatt attctttttc ttaacatttg
     2281 acaataccca tgctcccggt gatgcggttt ttggatccag caatctatta aaactataaa
     2341 caaagtcgct ggccacaact tttcttgatg cacctttgaa agaagaatcc ttatgaaaaa
     2401 aaacatcagt acgtaagttg aatgtatagt taagaccgtc ttcggagatc tcccagtttc
     2461 tggcaatcga aggagcaact tctaggctgt cattaagctt aacaagactg ttatacagct
     2521 gattacaaat ccagatatga gcgagatcgc gtgagaaagc tgggtcaagt gaaataattc
     2581 cagctgcttc attataggta aatacacttt tttcagagtt attttgttta tcggtacatg
     2641 aaataagaaa aattaatatc agcaccgcaa caatatgaaa gtatgtgttt tttactttca
     2701 aaaagtagat tattagttaa tcagtaaagg attgttaact tttacttgca aaagtgcatg
     2761 atcgatagct tcaagcatat tgtcaacgta tttaaattct aaacctttaa tatattcatc
     2821 cttaacttct tcaatgtctc ttcggttttc tttggaaaga atgatctctt tgattttagc
     2881 acgtttggca gcaagaatct tttcttttat accaccaacc gggagtactt tcccacggag
     2941 cgtaatctca cccgtcattg caagatttgc tttaaccttc cgctgagtaa atgcagaagc
     3001 aagggcggta agcatagtaa taccagctga aggtccgtct tttggagtgg caccttctgg
     3061 aacatgaata tgcacattcc aattcttaaa tacttcaggt tcaagtccga caatttgatg
     3121 atgggctttt aaatattcat aggcgagact tgctgattct ttcatcacgt cacccagatt
     3181 ccctgtaagt ttaagctctc cttttccttt gctcagactt acctcaataa acaaaatttc
     3241 gcctccaaca gcagtccagg ctaatcctgt tacaactccg gcaacgttat ttgtaatgtc
     3301 tttatctttc tgaaagatag gtacacccaa gatatcattg aggaggttta ttgataattt
     3361 agactcataa gtctcatcca tagcgatgaa tttcgcccta tttctaataa cttttgcaat
     3421 ttgcttttct aaatgtcgta ctccggcttc ctttgtgtaa tcatcaacta ttttttcaag
     3481 aatactattc ttaaacttaa cctgactgga tttaacacca tgttcaatta gttgtttagg
     3541 aagcaagtgc cttttcgcaa tctcaatttt ctcttccaga atatatcctg taagattaat
     3601 tatttccatt ctatcgcgta aagcaggatg cacagttgct aaagtatttg ctgttgcgat
     3661 gaacatgata tttgacagat catattctac ttcaagataa ttatcataaa atgaattatt
     3721 ttgttcagga tcaagtacct caagcaaagc agcctgtgga tcaccactat aattactacc
     3781 acttacttta tcaatctcat caagcataaa aacaggattt gatgtcttta tctttttaag
     3841 gctttgaatt attctgcccg gcatagcacc aatataagtc ttcctatgac cacgtaattc
     3901 tgcctcatca cgtactcctc caagagacat ccgtacaaat tttctgccca gcgcatttgc
     3961 aatagatttg cctaatgaag ttttaccaac tcccggaggg ccaacaaaac agagtattgg
     4021 cgatttcatg ttatccttta gtctaagaac agcaagatgc tcaatgatcc tgtcttttat
     4081 ttcttcaagt ccgtaatggt catcgttgag aacttttaag gcatgcttca gatctaggtt
     4141 atctttcgaa aactcattcc atggcaactc tacaaataag tcgaggtatc ccaattgaat
     4201 tgaatactca gctgccgctg gattcattct caggagcttg accatttcat ttttaaaaac
     4261 ctcagcaacc tctccagacc acaatttctt agaagctttt tcatttaact ccctaatttc
     4321 attatcgtgg gggccaccac cgagctcatc ctgaatagtt ttgagttgtt gatttaacag
     4381 aaaatcgcgc tgttgcttat ccatatcaac tttaactttg ctctggatat catgctttag
     4441 ctcaagtaat tgaagctctt tcgtcatgat ctccaatact ttgttggcgc ggttatctaa
     4501 atcggtcatt tccaacaact cctgctttgc tttattttca acatttaaat ttgaagaaat
     4561 aaaatttaat aggaaaacag gactttcaat attgttaata gcaaaaacag cttctgaagg
     4621 tatagctggt gacttttcaa taatttgtat gctaaggtct tttactgatg atattagagc
     4681 actaaaattt ttatcgtcag ggattttact tttatattca aggctaataa ttttagcttt
     4741 ataatatggc tctgattgag taatctcagt aatttcaaaa cgttttttgc cttgtattat
     4801 agctgtggtg ttaccatctg gcatttgcag gatttttatt aacctagcaa tggtaccagt
     4861 tttttgcaag tcatcaaatt taggatcttc aacttcagaa tccttttgtg caacaacacc
     4921 gatggtttta tttccctggt aagcttcttt aataagctta attgatttgt ccctgccaac
     4981 agtaataggt attactacac caggaaataa tactgtgttt cgaagtggaa gaatagctaa
     5041 ttcatcagga acgtcttccg cgttcatcat ttcttcatct tcggtagaaa gtagtggaaa
     5101 aaattcagtt tctgtatcta ctatgtctgt caatccaatt attttgtcca tatattagtt
     5161 tactgttaag ccaaattgtc agccgaatac tttatgatct atagtagcaa cttgtaaagc
     5221 gtaataaatc aattagttag cagactgact ttatctagag tcttatttgt aaaaaatcat
     5281 tggtaatact caattaacat gccaaaattt aaaggataaa gctgttgccg catactcctt
     5341 tggtaagagt ttgatattat ttattgttgt gtactagtcc ataaacatgt ttgaacatat
     5401 cctcttctag ttggttaaat tccatatttc gccttgcaaa tactgctttc gcaacttcaa
     5461 cggatttttt aaaattgtat ggctttaatc cgtgaacacc accccacata aatgaaggta
     5521 tgaaattacg ctgatatcct gaaccataaa tattacttga aactcccact acgctaccgg
     5581 tattaaacat tgtgtttata cctgattttg agtgatcacc cataataagt ccgcaaaatt
     5641 gcaatcccgt gttaacaaat gtattggaat catacgacca caatctaaca ttgtcgtatg
     5701 tgtttttcaa atttgaagta tttgtatcgg cacctaggtt acaccattct ccgattactg
     5761 aatttccaag aaaaccatca tgccccttat tactatatcc aagtattaca gagttattta
     5821 tttccccgcc aactttagaa tgtggtccta tagtagttcc tgaatatatc ttcgctccca
     5881 tttttacaac actatgatcg caaagtgcaa aaggtccacg tattttactc ccttccatta
     5941 tttctgcatc cttcccaata taaattggcc cgtcagttgt atttaaataa acaaactcca
     6001 cttttgaccc ttcttcgata aagattttat cagaatcacc aattatgaag ttcgtatcag
     6061 atataggttg tgaggattgg tttcttgtaa ggattacaaa atcatctgct atggcttgag
     6121 gattaatggt aaagatatcc catgtgtttt caatctgtaa gaaatccgat gtgactctaa
     6181 ttacctgata gtctgtgtta aatatattgt taaaattatc ggcttgaggt cttacggcaa
     6241 tttcaacctt ctcttttatt aaaacctgac cgggtaataa gtgattaatt tgttcaatca
     6301 gatcaccggt aggaaacact gagccgttaa taaaaatatt ctcatcagaa attattgttg
     6361 gatacttatt acttaaatac tccttagtcc tataagaaac ttttgagttt aagaaagtct
     6421 cccatttctc ttttatagtg agaatgcctg ttctgatttc tgcaacgggc cgtgtgaaag
     6481 taaacggaag cagtttgttg cgttcctggc cgtcaaataa tatataattc ataatcaaat
     6541 gatatgtatg ataattacat actttataaa taagaaataa aaatactaca aattaatcta
     6601 actaagaact tgtgctaaac tcaaaaaaaa agtctttgtg gtttacaaag acttttttgt
     6661 gtagtatata aactactctg agctaatttt tgttgagcag ttaattattc aaatctcaat
     6721 tgatattgta ttactggtat taaacagagt gttcaggtag aaattcaatg aattaactat
     6781 ctttcttatc gaaatgcttt ttgtatttgc tcttaaattt atcaacacga ccagcagtat
     6841 caactagttt catttttccg gtgaagaatg ggtgagattt atttgatatc tcgagtttta
     6901 ccattgggta ctctttacca tcttcccaaa caattttgtc tttagtgttt gcagttgacc
     6961 ttgtgataaa agaataatcg ttcgacatat ctttgaaaac gacgaatcta taattctttg
     7021 gatgaatatc tttcttcatt tttactaatt ttactatgct ttttaaaaag ggctgcaaaa
     7081 atattacctt tagtaaaaat atcctaattt tttggataat aatttataat caacaattat
     7141 aaataatatg gcaggtagtt atgtgtatgt tactatttta tcaaaaaaaa atctttacag
     7201 gttaatcaag aatttcaatg tgtcaattcc atcggcataa ttccatagct gtggtttttg
     7261 actgttgccc ggagaaatag aattcgtgat ctcttttgaa attgaaacaa cgcattgaat
     7321 ttttgaatta ttgacttcta ataatctgtt aactgaatta atatcagtgt agtggctaat
     7381 gttaattaca ctaaccggag aggaatagct actattttct gtaaacaaca aattgcctga
     7441 atcataatga ttggtcccgt tgaccagata aattgctttg ttgtattcat aattgttaaa
     7501 atacttatgg ttttgattta ttttctcatt taatgaacag gtttccaata atcctgtaag
     7561 ttcatacccc ttaggtaaca taatatgtga gacatttctg cagcctaatc cgaagtacat
     7621 aaaaatatcc tcggcaagct ggttgagatc cttttttgat tcctttcctg ttaatactgc
     7681 gatactgttc ctgttacgtc taataatatg aggatagctg ccaaaataat actcaaagta
     7741 ccttgatgta ttattgctac ctgttgcaat tattgcatca aagtctttta gttgattatc
     7801 cgtaaattca atcatccctt taaaacctga ttcaatatct ataagtaatt cgctaattat
     7861 aggaagaaga atgctgtcat ctgcagatag ttttgcctta atcatattac ctgaaataag
     7921 cacagataag aaatcatgga acccaacaac agggatattt ccagccataa ctacaccaat
     7981 tttcttgtca gacgaattac tacccaatcc ttgttcatat ggtttaatcc acttttcaat
     8041 atttgctttg gaaaggctcc tcccgacaga tgaaagcata tatcttacat tatcttctat
     8101 aaaccaacca ttgtaattaa cagcctcctt tacagcattt tcaagtttat taagttgtgc
     8161 tgaagtatgt accttctgat gatagttttc tccaacttcg agtagcatat cctcaagaga
     8221 agcaaaagct gtgatacgtt tcttaagact taccattagt agaatttttg caaaagtatg
     8281 aaatgaatga atgtgtaatt gaagaaaagt actgtaaact aaaatggatg cagattattg
     8341 cttgggttga aacccggaaa aggggcaagt ccgttcatct ggggagacag atgatccatt
     8401 ccagggccat atatagggta atcttgttga cgatattcaa atcctacatt aactctgaaa
     8461 ttatcagtta ctttatattc cacatccata ataattcctt gagtactaaa gtcatagaaa
     8521 ggtgatgcag tctcagaatt tggacttggg gaccctatca taaatgtttt gtaggctgtg
     8581 ccacgtaatg tgattttctc attcacaaaa taattccctg atacaaatat atgtccataa
     8641 ttggattgat tggaatgaaa caagctctca tttccgttac ctataaagaa cgttgagtat
     8701 cctattccag tacttaaaga aaacttattt gaaattggaa aggttatttg tggcataaat
     8761 gatgtactga ttgagttaac accttgacca aaagatgtaa acgaagtagt aagcgaagca
     8821 gacatctgtg gttttgagtt tcttagataa gagttattct gagtattatc aaacaaattg
     8881 gtttgagctt gtaagataaa gctgcacata aaaaaggttg caaataaacc aatgacatat
     8941 atttttgcta aggacttcat tttcaatttc aattacaaaa atagataaaa tttatgtctg
     9001 atacttatca aactcatcca gctatacatt aatcatcaat catcatccaa aggatctctt
     9061 aaggaaaatg atgtaataga ctcagtaaca gtcatattta ttactctcat aataataagt
     9121 tcagcaatca tattctcaat cttaaatctt gatagagata gctttgaaac tatttgcttt
     9181 aagggtaatg aatcatactt gcctaacatg ttaagtaatt tttttgcatt ttcagaatat
     9241 acaaacttaa tatccctttg tggattaagt ttctcccaga tcttcatttg aataccattg
     9301 gccaatttat tttgatcttg aatacgtaca tatgctttta atctcccatt ttgatctggg
     9361 gttttgtgag gtgcatttgt gcttttaact atgttaattt caagaatttt ttttccgttt
     9421 aaatgccatt ctttataaga aaagggaacc tgtggaatgc aatattttgc ggctgcattt
     9481 tctatcataa acagctcttc ttcagacatg attcctgaga tttctccggt atccttaacg
     9541 cctattaata gttttcctcc gctcgtattt gcaaatgaaa ctaatgaacg tgcgatttta
     9601 gcagcatcac ttacttcaaa tttaaaatca agttgcttac cttcgccagt ctcaataagg
     9661 ttgagtattt tatgtttttt tgcgatggtt tattggatta agacattatc cttcaccttt
     9721 caaattatca tcaataaaac tcaatatttt ctttcttcat ggttttttca caaaaatgac
     9781 aatcaagttt catttctccg ttaaaatctt caaacacttt gaactttgtt ttaatatcct
     9841 ggatattagt cacacatttt ggattaaagc attttacaat cttttcaacg tactcaggta
     9901 gatggacctt acccttctta gtcacctcat aatcagtaat ttctattaat gtagcagaag
     9961 gagcaactaa tgcaattttg cttatttctt cgtccttaaa atatttattg ctaattttta
    10021 ttataccctt tgttccaaat tttttacttt caagtgctgt cccaaaatag atttgcttgt
    10081 ttgatgtgtc caggttaagt attttaatga cttgaaatga tttatctgaa ggaatatggt
    10141 cgattacagt accattgcga atagcagata cttttaactc ttttctttta atgtccatgg
    10201 ttagattttt tgattgatta tttaagacct agaatagtag caataagtgc ctgtcgtacg
    10261 taaaccccgt ttttagcttg ttgaaaatag tatgctttag ggttattatc aacatcttcg
    10321 gttatttcat taacccttgg tagcggatgt agtactttca tattatcctt agtatcttcc
    10381 agcatgctat tttcaaggat atatgaattt ttgacttttt catattcaag tggatcgggg
    10441 aatctttcac cctgaattcg ggtcatatac agtatatcag caataggcat tacatccatc
    10501 atatcagtgt attgatggta tttcagatca gctttcttaa tccaagtttt gacggaactt
    10561 ggcattttaa gagaatcagg agatacgaaa tggaaagtcg ctccaaacaa agatagtgct
    10621 tgaactaacg agtgtactgt acggccgtat tttaaatcac cgaccatagc aatattaata
    10681 tcctctagcc ttccttgagt ttttctaatt gagtatagat cgagtaggca ttgtgttgga
    10741 tgttgatttg caccgtcgcc tgcattaatt attggaaccg gtgatacttc acttgcatat
    10801 cttgcgctac cgtccattgg gtttcgcatt acgattaaat cagaataatt gctgacagta
    10861 agaattgtgt cttttaacga ttctcccttt ttaacacttg atgtatcagc acttgcaaac
    10921 ccaattatgc tgccgcccaa atattgcact gaactttcaa agcttagacg tgtacgtgtt
    10981 gaaggttcaa agaaaagaga tccaattaca tatccatcaa gtatattttg acggtggttc
    11041 ttctcgaatt cttcagccag atcaagtatg tgaattattt cttctttact ataatcagta
    11101 attgaaacca ggctcctgcc ttttagatca ttcatagttt aatggtttgt attacaaaaa
    11161 aaagacggtc acatactgta gtgaccgtct aaaaaaatct ttttgctgaa aatgttataa
    11221 cagctatgta ttcattgaat tccctgatca aaaaatgttt tttcatctca gagtacaaag
    11281 atagtacaat atcaagctaa caaaatgtga gttttcgaca attgaaaggg agttactaac
    11341 aatccataag ttcagagttt ggagttttgg atttggtatt agattatatt gcgtattaac
    11401 agttattaat catgaaaaac ccactgtaac attagtaaac cattaagttt cctacttttg
    11461 catttcatta caatgctatg caaaataaca ttcgtataaa aaataaaaga gtatcgtggg
    11521 agtacttctt gacagagaaa gttgttgcag gtattgtatt aactggtact gagattaaat
    11581 caataaggat gggaaaggct agccttgcag attcgtattg ttattttgat gagggtgaat
    11641 tatttgtacg tggaatgcat attactgagt atagctatgg cacttataat aatcacctgg
    11701 caaaacgtga taggaaatta cttctcactt cacgtgagct taagaagttg aatgtcaagg
    11761 ttaaagaaaa aagcatgact attattccgg ttgttttgtt tataaatgat cgaggtttgg
    11821 ctaaattgga aattgcagtt gcaaaaggaa aacatttcta tgataagcgc aatactttaa
    11881 aagaaaaaga tcataagcgt gaaatcgacc gacacttaaa aaaataaatt aatattcgat
    11941 cttattctca ctttcattcc aggcttcaaa aacttttata gcatcttctc gcattaattg
    12001 cagggatgat atcgttcgtt gatctttggg tagagaaaac tccttataaa tagttgaatc
    12061 atcaaaatca gcttttgtag catcatcttt tgttgcagca taatatagtt tatcgatcct
    12121 tgcccaataa atagcaccta aacacatagg acatggttcg cagcttgcgt atatttcaca
    12181 tccttgtaaa tgaaatgaac ctatattgtg tgcagctttg cgtatagcaa ctatttcggc
    12241 atgtgcagtt gggtcattgg tttcagttac aagattggct ccctggccaa taatccgtcc
    12301 atcctttact acaactgctc caaaagggcc acccttattt tcttttacat tagaaaatgc
    12361 tagttcaatg gcctgcttca tatgtaactt cttttcttcc aattgttctc agttaatttt
    12421 tagttgctgg tagattccaa ctaccagttt tactttcttt agtgatagaa tttttaagca
    12481 aatgtaaaaa ttctttccta tcaacacttg ttgcacccat actcctaaga tgttctgttt
    12541 cctgttgaac atcaatcaag tcaaatttcc atattaataa ccggtcaaca agatgccata
    12601 acgccacttt ggaggcagca gtaacaagat ggaacataga ttcaccaaaa aagcaaccac
    12661 cgattgacag gccatata
//
LOCUS       DASCQP010000360         2035 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001321076, whole genome shotgun sequence.
ACCESSION   DASCQP010000360 DASCQP010000000
VERSION     DASCQP010000360.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2035)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2035)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2035
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001321076"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..802)
                     /locus_tag="QF480_06155"
     CDS             complement(<1..802)
                     /locus_tag="QF480_06155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06180.1"
                     /translation="MKYLIVNIIFFLLITQSVISRDNEAPVVTCLEVHEGGEVTIYWQ
                     SLDTTALEFQIYYSTDNVNWLQAGSVDSQNQSLQFYHSFAVANVQLYYYFIKAIYTTT
                     EVDSDVFRTIYLEVDNSTAGIATLLWNSVHTPLPEGSSNYYRIYSSTYVEGIPDSWSL
                     IADNIENTLYNYIIPDGLCYDSINFKIEIENSYGCSSVSNITGDWFSETNQPEKPVFD
                     SVSIINNSNVILGWESSISLDAWGTVIYRYEGNIWVGIDTVFDNNNTYY"
     gene            1013..>2035
                     /gene="glyA"
                     /locus_tag="QF480_06160"
     CDS             1013..>2035
                     /gene="glyA"
                     /locus_tag="QF480_06160"
                     /EC_number="2.1.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008157671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004372 - glycine hydroxymethyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0070905 - serine binding [Evidence IEA];
                     GO_process: GO:0019264 - glycine biosynthetic process from
                     serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HJN06181.1"
                     /translation="MEKDQKIFDLIRLEKKRQTVGIELIASENFVSDQVLEAMGSVMT
                     NKYAEGYPGKRYYGGCEIVDESEQLAIDRACTLFDAEYANVQPHSGAQANMAVFLACL
                     KPGDTFMGLDLSHGGHLSHGSFVNSSGILYNPVAYKVKEESGIVDYDEMEALALKERP
                     KMIIAGASAYSRDWDYEQMRYIADQIGAILMADIAHPAGLIAKGILNDPIEYCHILTT
                     TTHKTLRGPRGGMILMGNDFENPWGLKTPKGVTKMMSTVLNSAVFPGIQGGPLEHVIA
                     AKAVAFGEALTDEYFEYILQVKRNANEMSRAFMSKGYKVISGGTDNHLMLIDLRSKFP
                     EITGKIV"
BASE COUNT          694 a          329 c          390 g          622 t
ORIGIN      
        1 aatagtaagt attattattg tcaaaaacag tgtctatacc aacccaaata ttaccttcat
       61 atcgataaat tacagtgccc catgcatcta aactgattga agattcccaa cctaaaataa
      121 cattactgtt gttaataata cttacagagt cgaaaacagg tttttcaggc tgatttgttt
      181 cgctaaacca atctcctgta atatttgaaa cagatgagca tccatacgaa ttttcaatct
      241 caattttaaa atttatacta tcgtagcata aaccatctgg aattatgtaa ttgtacaatg
      301 tattttcaat attatcggca attaggctcc atgagtcagg tatgccttca acataggtgc
      361 tactgtaaat acgataataa tttgatgacc cttcaggtag aggagtatgt acagaattcc
      421 ataagagtgt tgcaatgcca gcagtactat tatcaacttc caggtagatg gttctgaata
      481 cgtcagaatc aacttccgtc gtagtataaa ttgctttaat gaaataataa tatagttgca
      541 cattagccac tgcgaatgag tggtaaaatt gcaaactttg attttgacta tcaactgatc
      601 cagcctgtaa ccagtttaca ttatctgttg aataataaat ttgaaattct aaagcagtag
      661 tgtctagtga ttgccaataa attgttacct caccgccttc atgtacttct aaacacgtca
      721 ctacaggagc ttcattatct ctgctaatta cagattgtgt aatcagtaaa aaaaatatga
      781 tatttactat taggtatttc actggattta atcaactact tgcaagtaat tttagagttg
      841 ccacgaatta gaaaatcttc ctcgaattag cattatttct cattatgcaa acataaggat
      901 ataactttta atcacattta ttattttgtt gagcatctaa aatattaata cttttgttgg
      961 gaggaaaatg aaaagtacta ttagtaaaat caaacattaa ttaataacat atatggaaaa
     1021 agatcagaaa atatttgacc ttataagatt agagaaaaaa cgacaaacag ttggaattga
     1081 acttatcgca tcagaaaatt ttgtgagtga tcaggtgctt gaggcaatgg ggtcggtaat
     1141 gacaaataaa tatgcagaag gatatcccgg aaaaagatat tatggtgggt gcgagatagt
     1201 tgatgagagc gaacaattgg ctatagacag agcttgtaca ttatttgatg cagaatatgc
     1261 taatgtgcaa cctcattccg gtgctcaggc aaatatggct gtgtttttgg cttgtctaaa
     1321 accaggtgac acatttatgg gtctcgatct atcccacggt ggtcatttat ctcatgggtc
     1381 ttttgtaaac tcgtctggca ttctttataa tcctgttgct tataaagtga aagaagaaag
     1441 tggtatagtt gattacgatg agatggaagc acttgctctc aaagaaaggc caaagatgat
     1501 aatagcaggg gcatcagcat attcacgtga ttgggattat gaacaaatga gatatatagc
     1561 cgatcagatt ggtgctatat tgatggctga tatagctcat cccgctgggt taattgccaa
     1621 aggaattcta aacgacccca ttgaatattg ccatatactt accactacaa cgcataaaac
     1681 attgcgagga ccaagaggag gtatgatatt aatgggaaat gattttgaaa acccatgggg
     1741 actcaaaaca ccgaagggag taactaaaat gatgtcaact gttctaaatt cagctgtttt
     1801 tcccgggatt cagggagggc cactagagca tgtgattgca gcaaaagcgg ttgcttttgg
     1861 agaagctcta acagatgaat attttgagta tatcctacag gttaagagaa atgcaaatga
     1921 gatgtcaagg gctttcatgt cgaaaggcta caaagtaata tcaggaggaa ccgataatca
     1981 tttaatgttg atcgatctac gtagtaagtt tccagaaatt accggtaaga tagta
//
LOCUS       DASCQP010000361         3042 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001325115, whole genome shotgun sequence.
ACCESSION   DASCQP010000361 DASCQP010000000
VERSION     DASCQP010000361.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3042)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3042)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3042
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001325115"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..508)
                     /locus_tag="QF480_06165"
     CDS             complement(<1..508)
                     /locus_tag="QF480_06165"
                     /inference="COORDINATES: protein motif:HMM:NF014708.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HJN06182.1"
                     /translation="MRTIKRVIGAPKVNMGGIILDQPLPVRGVEQIDPFLLVHHWKHT
                     HRGGQHQRDLGVGPHPHRGFAPVTFIFNGGVHHQDSRGNNSIVEAGGTQWMNSGMGIV
                     HSERPTKEIAENGGEFEIIQLWVNAPAKNKMDPPSYQSLTKEDTPSVMSDDDKIEISI
                     VAGEFNGIK"
     gene            complement(510..959)
                     /locus_tag="QF480_06170"
     CDS             complement(510..959)
                     /locus_tag="QF480_06170"
                     /inference="COORDINATES: protein motif:HMM:NF024854.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HJN06183.1"
                     /translation="MVSKIKKDPTVTKQQRMVIDIIHTANWLDERISKVLKGFGITHP
                     QFNILKNIQAAHPEPLSVKEIKDTIMFTNSDVTRLVDRLVKKELLCRDTCPENRRKMD
                     VSITEKGVDMLDQILPELKKTFNNFFETKVSLEDALKTSEILRRIRQ"
     gene            complement(1134..1649)
                     /locus_tag="QF480_06175"
     CDS             complement(1134..1649)
                     /locus_tag="QF480_06175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreD"
                     /protein_id="HJN06184.1"
                     /translation="MNNVVLRNIIRFVILMLIQVLVLNNMNLGGYMNPYIYVLFLLLL
                     PSNINRSLLLIIAFVTGLTVDFFGNTLGLHAAACVLLAFLRPGTINLMFRYYEFNPGE
                     EPGPAAIGVRGFLKYALVLVFAHQLLLFYLEVLSISHFFITLYKVVLSTALSTFIMLI
                     AVLLFTKRKIK"
     gene            complement(1642..2463)
                     /gene="mreC"
                     /locus_tag="QF480_06180"
     CDS             complement(1642..2463)
                     /gene="mreC"
                     /locus_tag="QF480_06180"
                     /inference="COORDINATES: protein motif:HMM:NF010532.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HJN06185.1"
                     /translation="MRNLFSLIWKNQFLVLFVLLEVFSLILLSRSYSYHGSITYNATS
                     DISGNIFSVYSGVTDYFSLKKENSILAEENAMLKNRLKSSFLVTDTNYVYRDSLFQYI
                     PVKVVSNSVSRRNNFIMVNKGRKHGIKKEMGVVSPNGIVGVVIGVSKNYSTIMSMLHQ
                     NMRISGRIKKSGQLVNVIWDNNDYLFGTVIDIPSHIRLLSGDTIITSGNSLIFSEGII
                     IGTIDSHEQDNNKKLSVAKLRYTTDFTSLSHIYIINNLMSMEQDSLLKQIVKQDE"
     gene            complement(2566..>3042)
                     /locus_tag="QF480_06185"
     CDS             complement(2566..>3042)
                     /locus_tag="QF480_06185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004341696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HJN06186.1"
                     /translation="IAGDDFNHDIEEYMRKQHNIIIGERTAERIKIEVGAAITELENP
                     PDNYAVHGRDMLTGIPKEIMVNYKEIAICLDKSISKIEAAVLNALEKTPPELSADIYR
                     TGIYVAGGGSMLRGLDKRLHHKTKLSVHVAEDPLRAVARGTGIALKNFDKFPFLIK"
BASE COUNT          987 a          574 c          444 g         1037 t
ORIGIN      
        1 ctttaatacc attaaattcg ccagccacaa tgctaatttc aattttatca tcatcactca
       61 ttacagatgg cgtatcttct tttgttaacg actgataaga tggaggatcc attttgtttt
      121 ttgctggagc attaacccac aactgaataa tttcaaattc acctccattt tcagcaatct
      181 cttttgttgg tcgttcacta tgaacgattc ccattccact gttcatccat tgggttccac
      241 cagcttctac aatactatta ttacctcgtg aatcctgatg atgaactcct ccattaaaaa
      301 tgaaagtgac tggtgcaaaa ccacgatgag gatgtggacc tactcccagg tcacgttgat
      361 gctgaccacc tctgtgagtg tgcttccaat gatgcaccag cagaaaagga tcgatctgtt
      421 caactcccct cactggtaat ggttggtcca atattattcc tcccatattt acttttggag
      481 cacctattac tcttttaatc gttctcatat tattgtctaa ttctccttag tatttcagaa
      541 gtttttagtg catcttccaa cgataccttt gtttcaaaaa aattgttaaa tgtttttttt
      601 aattcaggta aaatctgatc taacatatct acacctttct ctgttattga aacatccatt
      661 tttcttctgt tttcaggaca agtatctctg cataataatt ccttttttac tagtcggtca
      721 acaagtcgag ttacatcaga attagtaaac ataatggtgt ccttaatttc cttaacggat
      781 agaggttcag gatgtgcagc ctggatattt ttcaagatat taaattgtgg atgagttatt
      841 ccgaaacctt taagaacttt tgatatcctc tcatccaacc aattcgcagt atgaataata
      901 tcaattacca ttcgttgttg cttagtgaca gtaggatcct ttttaatttt agataccata
      961 ttagatgttt ataacaattg ttgtttacaa cagtaaaatt aaatatttat ctgaatatgc
     1021 ttggattatt gcagatcaat tgtagttaaa aagatgttaa aagttaattg ataatagctt
     1081 ttttggtata gtagattgta ttatcatcta agaataatct acatgcaaat agactacttg
     1141 atttttcgtt ttgtgaacaa caatactgct ataagcataa taaaagtact taaagccgta
     1201 cttagcacca ctttgtaaag tgtaataaaa aaatgactga tgcttagcac ttctagataa
     1261 aacaataata actgatgtgc aaaaacaagc acgagggcat actttaaaaa gcctctaact
     1321 ccaattgctg ctggcccggg ttcttctcca gggttaaatt cataataacg gaacatcaaa
     1381 ttaattgttc caggtcgtag aaatgccagt aacacgcatg ctgccgcatg aagtcctaat
     1441 gtatttccaa aaaaatcaac agtaagtcca gtaacgaatg ctattatcag tagtagactt
     1501 ctgttaatat ttgatggtag caataataaa aagagaacat aaatataagg attcatatat
     1561 ccgccaaggt tcatattgtt aagaaccaat acctgaataa gcattagaat tacaaacctg
     1621 attatatttc tcaatacaac attattcatc ttgtttaact atctgtttaa gaagtgaatc
     1681 ctgctccatg ctcattaaat tattaataat atagatatgg ctaaggcttg taaagtctgt
     1741 tgtgtaccta agtttagcaa cacttagttt tttattgtta tcttgctcat gggaatcgat
     1801 agtaccaata ataattccct ctgaaaaaat taaagaattc ccactagtaa taattgtatc
     1861 gcccgacaga agtcttatat gtgatggaat atcaattaca gtaccaaaca aataatcatt
     1921 attatcccaa ataacattca caagttgacc gcttttttta atacgtccgc ttatacgcat
     1981 attttggtgt aacatcgaca taatggtcga ataatttttt gatacaccaa taacaactcc
     2041 cacaattcca ttaggtgaca caactcccat ttctttttta ataccatgtt ttctgccttt
     2101 gttaaccatg atgaaattgt ttcttctgga tacactattg cttacaactt taacaggaat
     2161 gtattggaat aagctatcgc gatatacata attagtgtct gttaccaaaa acgacgactt
     2221 caacctgttt ttgagcattg cattctcttc tgcaagtatt gaattttctt ttttcaaaga
     2281 aaaataatct gttacaccac tataaacaga gaatatattg ccacttatat cacttgtagc
     2341 attataagtt attgagccat gataagaata actacggcta agtaatatta atgaaaaaac
     2401 ttcaaggagg acaaacagga ctaaaaattg atttttccat attaagctaa aaagattccg
     2461 catcctgcca gattagatta tcgtattaat tagcatccaa actttattag ccagattaat
     2521 aacttttggt tctacaaact cgagattacg tttagtactt ataaactatt taataagaaa
     2581 aggaaactta tcaaaattct ttaaagctat ccctgtgcct cgggcaacag ctctcaatgg
     2641 atcttcagca acgtgaacag ataattttgt tttatgatgc aatcttttat cgagacccct
     2701 taacattgat ccgccacctg caacataaat tccagtacga taaatatcgg cagaaagttc
     2761 tggaggcgtt ttttcaagtg cattaaggac agcagcttca atctttgata ttgatttatc
     2821 taaacaaata gcaatttcct tgtagtttac cattatctct tttggaatac ctgtaagcat
     2881 atcacgacca tgaacagcat aattatcagg aggattctct aactcagtaa tagcagcacc
     2941 cacttcaatt ttaatacgct ccgctgttct ttctccaata ataatattgt gctgtttacg
     3001 catatattcc tcaatatcat ggttaaaatc atctccagct at
//
LOCUS       DASCQP010000362         7474 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001347525, whole genome shotgun sequence.
ACCESSION   DASCQP010000362 DASCQP010000000
VERSION     DASCQP010000362.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 7474)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7474)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7474
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001347525"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            114..1982
                     /gene="mnmG"
                     /locus_tag="QF480_06190"
     CDS             114..1982
                     /gene="mnmG"
                     /locus_tag="QF480_06190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006841618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0002098 - tRNA wobble uridine modification
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HJN06187.1"
                     /translation="MFEQYDIIVVGAGHAGAEAAASAARLGSRVLLITMNLQQIAQMS
                     CNPAMGGVAKGQIVREIDALGGYSGLVSDSTMIQFRMLNKSKGPAMWSPRTQNDRVQF
                     SIEWRNILECIPNLDFWQDTVTSLIIKNNKVCGVVTKMGQKIYSQSVILTNGTFLNGK
                     IHIGQKHFSGGRIGDPSSLGITEQLVGLGFESLHLKTGTPVRVDGRTIDFSKMEEQKG
                     DENPGGFSFLKKNRLKKQRSCWIAYTSSEVHDELRLGFSESPMFAGRIEGTGPRYCPS
                     IEDKINRFSDKNRHQLFIEPEGWNTIEYYINGFSSSLPDKVQLSALRKIEGFEKAKIF
                     VPGYAIEYDYFPPTQLRYTMETKLIENLYFAGQINGTTGYEEAAAQGLMAGINANLKL
                     NNKQAFILKRHEAYIGVLIDDLVTKGVDEPYRMFTSRAEYRILLRQDNADLRLTHLGY
                     KIGLATKERFDLALKKQSIITDIIDFSKKQSVTPKETQKLLKDRNTSPLRQKIKLSEL
                     LLRPQVNLSDLISISVPLKDKINNLSASPEDIEGAEILVKYDGYIKKEKDLVSKLSKL
                     DNIPLKKDFDYNNLKSLSTEAREKLSKIKPETIGQASRISGVSPSDINVIAVFIGR"
     gene            1994..2887
                     /locus_tag="QF480_06195"
     CDS             1994..2887
                     /locus_tag="QF480_06195"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HJN06188.1"
                     /translation="MKQNAELIEIKNCPVCSETVFKPFLNTTDYFYTQEAFSLTQCEN
                     CDFVFTNPVPNNPYKYYETQDYLSHDSGDRGVIGRLYSLFRNINIKRKYELVRKYCDN
                     GSILDIGCGTGELLRFFNKKNWSVTGIEPNPKAREFAISNYNLNVLDENNLDEFSPGT
                     LDVISLWHVLEHVPDLHKRLSQINELLKDDGTIFIALPNLESPDSEKYKEYWSGLDVP
                     RHLHHFTKTTFSKLISTHNMKIVHSEPMKFDSYYVSLLSEKYLKNRFYFLSAIYNGYI
                     SNLEAKVSNNYSSMIFVVKKQ"
     gene            2966..6598
                     /locus_tag="QF480_06200"
     CDS             2966..6598
                     /locus_tag="QF480_06200"
                     /inference="COORDINATES: protein motif:HMM:NF014567.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HJN06189.1"
                     /translation="MTNKSVLFFFLATSILFLFSYYLTQYFHNQHHTLESEFVSLSEC
                     VDFQSVKLLNGGVEVRNFIETSPNDIWKKLDFFFSQSTYFCFVTHNDSVIYWNSNKVA
                     IDNFRELISDNNIHAVNLPSGWYLYYGSKVGNYNIYILDLIKTGFLVNNEFLTPGFNP
                     AFSSCNDIDLTFNVGIADYVIYNNNDQVLLCATIDSNNALHNSDNYVLFLLFFLSYVF
                     LLLFLLQLIKMSELYKREPLFGFTVFILLVIIMRFLVTFLSIPTELKSSSIFANNIFN
                     IPFTKSLGDLIINTTLLIICSVGLFRFFRKITTTPSPSKIILLYTSLWIYILVIVYVL
                     YHTIFDQNISFFSGSIFKNFELFISVLIIVGLNISFYYVIVTYLNSNQNKKEPFFVSY
                     IITFVGVFVIYLISDTPIILLTTTLVITFSILLIKQLLWKYFSDSFLNHLFLLVFLAA
                     ISSFVIINAYQLKNEDYQKHIAKTLAIANDSLFENSYVNIIDVIKNDERLKQMLIAET
                     VTTDELLEVYIKSEYFSDFLNKYTIQITICGEDELLEIQPEGDVYGCADYFNTLIEEI
                     TIPVIDSTLFRFNSGTESIYYISRITLNNAGNRKLFIEFASSHVPEGLGYPELLIDKR
                     SNELNLSEYSFAKYTDNRLTYKFGDFAYNTYFTVNKSFKFDSFFDYNGYRHFAISISP
                     DGFLIVSKENTRLTMKLVVFSAIFILLALISIIVYLLMYARKAVHLFRLNFKTRLQTF
                     VIATLTLTFVLVAVSTLVYIEDNSRDDLEKQLTEKTNSVLIELQHKLSPITNFKSEDP
                     DFLHQLLRKFSLVFFSDINLYDNSGYLIATSRPEIFEKNLLSSFINPLAYKAIFTDNK
                     LNFITEEKIGSLKYYSAYVPINLNNDRPIGIVNLPYFARQTEFTRSYYIMLSYLINIY
                     VIIGIIGALIAITFSRYLTRPLVLLQKSLATIRIDEHNEKIDWNKKDEIGTLIKEYNL
                     MVDKLEQSTYLLKHSERESAWREIAMQIAHEIKNPLTPMKLNIQYLEKSFKNKDPDFD
                     SKINSISQSLITQIDALDNVAEMFSNFAETRFSEFEKVNLKTIIDSSVNLFDKKNNVV
                     ISITYTDADLFTLGFEKDILRAFNNILKNAIQSIENSENGEIKITAKRDSNFITIEVS
                     DNGKGVSEEMKSKIFQPYFTTKTSGTGLGLAIVKNIMNEIGGKVSFESNTGQGTTFSL
                     MFPESS"
     gene            6661..>7474
                     /locus_tag="QF480_06205"
     CDS             6661..>7474
                     /locus_tag="QF480_06205"
                     /inference="COORDINATES: protein motif:HMM:NF014051.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HJN06190.1"
                     /translation="MIKGANPIKKLAGETAIYGLGTMVPRFLNYLLVPLYTIYVFTKA
                     EYGQVTLLYSYIAILLVLLTYGMETAFFRYANKSKDAKKVFNTATSSVLITSTLFLLI
                     IFVFSSDISRLIQYPSNNEYVLIVSLIIAVDAITALPFAYLRYQNKPFKFSVIRIISV
                     VITISLNLIFLVVIPNYYGDNFRALPVYRSTSLVTFVFIANLIGSLSALLMLSREFGY
                     FRFKIDTTLLKQLLKYGLPILIISLSFMITEVADKILLKYFLPDGADADSQIG"
BASE COUNT         2476 a         1266 c         1243 g         2489 t
ORIGIN      
        1 ttggttataa tgatatctct tcctccgaaa agaagctaat gcgaagtaaa gaagattatt
       61 atttacattt gcagcgttaa ttttcccaat tgttccacgt gaaacaaaaa agtatgtttg
      121 agcaatatga tatcatagtt gttggagcgg gtcatgcagg tgcagaagct gcggcttctg
      181 ccgccaggct tggttcaaga gtattgctta taacaatgaa tttacagcaa attgctcaaa
      241 tgtcatgcaa tcctgcaatg ggtggtgtgg caaaaggaca gatcgttcgt gagattgatg
      301 cactaggtgg atattccgga ttggtttcag acagtacaat gattcaattc agaatgctaa
      361 acaaatcaaa aggtccggca atgtggagtc cgcgaactca aaatgacaga gtgcaatttt
      421 cgatagaatg gagaaatatc cttgaatgta taccaaatct cgatttttgg caagacacag
      481 ttactagttt aatcattaag aacaacaagg tttgtggggt agtaacaaaa atggggcaaa
      541 aaatatatag tcagtctgtt attctaacaa acggcacttt tcttaatggt aaaattcaca
      601 ttggacaaaa acatttctct ggtggaagaa ttggcgaccc ttcttcattg ggaataacag
      661 aacagcttgt cggtctggga tttgagtcgc tacaccttaa aactggcaca ccggttcgcg
      721 ttgatggaag aacaatagat ttttctaaaa tggaagaaca aaagggtgat gagaatcctg
      781 gcggtttttc atttctcaag aaaaatcgac tcaaaaaaca gcggagttgc tggatagcat
      841 atacttcttc tgaggtacac gacgagcttc ggttgggatt ctccgaatct ccaatgtttg
      901 caggaagaat agagggtact ggtcccagat attgtccctc aattgaagat aaaatcaatc
      961 gattctctga taagaataga catcaactat ttatagaacc agaaggttgg aatactattg
     1021 agtattatat aaatggtttc tcatcatctc ttcctgataa agttcaatta agtgcgctaa
     1081 gaaaaattga aggctttgaa aaagcaaaaa tatttgtccc cggctatgct atcgaatacg
     1141 attattttcc tcccacacaa ctccgttata caatggaaac caagttaatt gagaatttgt
     1201 actttgctgg gcaaataaat ggcacaaccg ggtatgaaga ggctgcagca cagggattaa
     1261 tggccggaat taatgcaaat ctgaaattaa acaacaaaca agcctttatt cttaaaaggc
     1321 atgaagcata tattggtgtt ttaattgatg atcttgttac aaaaggtgtt gatgaaccat
     1381 acaggatgtt tacttcaagg gctgaataca gaatattgct tagacaggac aatgctgatt
     1441 taaggctcac acacctgggg tataaaattg gccttgccac aaaggaacga ttcgatttag
     1501 ctttaaaaaa gcaaagcata atcactgata ttattgactt ttctaaaaag caaagtgtaa
     1561 cccctaaaga aactcaaaaa ttattaaaag accgaaatac ttcacccttg aggcaaaaga
     1621 tcaaattatc agaattactt ctaaggcctc aggtaaatct ttcagatctt atttctataa
     1681 gcgtaccgct taaagataaa ataaataacc tttctgcaag cccggaagat atagagggcg
     1741 ctgaaatact agtgaaatat gatggctata ttaaaaagga aaaagatcta gtctctaagc
     1801 tttcaaaact tgataatatt cctttaaaaa aggactttga ttataataac ttaaagtcgc
     1861 tttctaccga agcaagggag aagctttcaa aaataaaacc agaaaccatc ggtcaggcat
     1921 ctcgaataag tggggtttct ccttcagata ttaatgtaat cgccgttttc attggccgat
     1981 aaaaatgttt cacgtgaaac aaaatgcaga attaatagaa ataaagaatt gtccagtttg
     2041 ttctgaaact gtttttaaac cttttcttaa cactacggat tatttctaca ctcaagaggc
     2101 gttttcatta acccaatgtg aaaattgtga ttttgttttt actaatcctg tgccgaacaa
     2161 tccctataaa tactacgaaa ctcaagatta tctatcacat gattcaggtg atcggggtgt
     2221 tattggcagg ctatattcat tgtttagaaa tatcaatatt aaaagaaagt atgaactcgt
     2281 aagaaaatat tgcgataatg gtagtattct tgatataggt tgtggtacgg gcgaattatt
     2341 aaggtttttc aataaaaaga attggtctgt aacaggcatt gaacctaatc ctaaggcacg
     2401 agaattcgcg atatcaaatt ataatttaaa tgttcttgac gaaaataatc tcgatgaatt
     2461 ttctccaggt actctcgatg ttatttcatt gtggcatgtt ctcgaacatg tgccagatct
     2521 tcacaaaaga ttatcccaga ttaacgagtt attaaaagat gatggtacaa tttttattgc
     2581 gcttcctaat cttgaatctc ccgactctga aaaatacaaa gaatattggt ctggcctaga
     2641 tgttcctcgc cacctccatc atttcaccaa aactactttt agcaaattaa tttctacaca
     2701 taatatgaaa atcgtacatt cagaaccaat gaaattcgat tcatattatg ttagcttatt
     2761 aagtgaaaaa tatctcaaaa atcgctttta cttcttatca gcaatttaca atggctatat
     2821 ctcgaactta gaagcgaaag tttcaaataa ctattccagc atgatatttg ttgtaaaaaa
     2881 gcagtagttt ttttatttat ctttgggggc cagccagtac aatagaacaa tatactataa
     2941 tgattaacta caacttatgg gtaaagtgac aaataaatct gtattgtttt ttttcttggc
     3001 gacttcaatt ctattcttat tctcatatta tcttacccaa tatttccaca accaacatca
     3061 cacattagaa tctgaattcg tttctctaag tgaatgtgtt gattttcagt ctgttaagct
     3121 gcttaatggg ggggttgagg tacgtaattt tattgagact agcccaaatg atatttggaa
     3181 aaaattagat tttttctttt cccaaagcac atatttttgt tttgttactc ataatgatag
     3241 tgtcatttat tggaactcaa acaaagttgc tattgataac ttcagagaat taattagtga
     3301 caacaatata cacgcagtca acctaccttc agggtggtat ttatattatg ggtccaaagt
     3361 tggtaactac aatatctata tccttgactt aataaaaaca ggttttcttg taaataatga
     3421 atttctaacg ccaggtttta atccggcatt ttcaagttgc aatgatattg atctgacatt
     3481 taatgttggt attgctgatt atgttattta taacaataat gatcaggtat tgctatgcgc
     3541 cactatcgat tctaataacg cattacacaa tagtgataat tatgttcttt tccttctttt
     3601 ctttctgtca tatgtttttc tgcttctatt tttgcttcag ctcataaaga tgtcggaatt
     3661 gtataaaagg gaaccattat ttggctttac tgtttttata ttattggtga ttattatgcg
     3721 gtttctggtt actttcctca gtattccaac agagctaaaa tcatcgtcaa tatttgctaa
     3781 taacatattc aatatccctt ttactaaatc tctaggtgac ctgataatta atactacctt
     3841 attaattatt tgttcggtcg gattatttcg tttttttaga aaaataacga ctacgccatc
     3901 tccttctaaa ataattctat tatacacctc tttatggata tatatattag taatagtcta
     3961 cgtactgtat cacactattt tcgatcaaaa catttcattt ttctcaggaa gtatttttaa
     4021 aaattttgaa ttatttatat ctgttttaat aatcgttggg ctaaatatat ccttctacta
     4081 tgttatcgtt acctatttga attctaatca gaataaaaag gaaccctttt ttgtttcata
     4141 cattatcacg tttgtgggtg tttttgtaat ttacctcata tcagacactc caattattct
     4201 tcttacaaca acccttgtaa taacattttc tatattatta ataaagcaat tattgtggaa
     4261 gtatttttct gattcgtttc tgaatcatct ttttttatta gtgtttttag ccgcaatatc
     4321 ttcatttgta ataattaatg cttatcagct caaaaatgag gactatcaaa aacacatcgc
     4381 caaaacacta gctattgcaa atgattcctt gtttgaaaat tcgtatgtaa atatcattga
     4441 cgtcattaaa aatgatgagc gtttaaaaca aatgttgatt gctgaaactg ttacaacaga
     4501 tgagctctta gaagtctata taaaatctga atatttcagc gactttttaa acaaatatac
     4561 tattcaaatt actatctgtg gagaagatga gctgcttgaa attcagcccg aaggtgatgt
     4621 atatggttgt gcggattatt tcaacacatt aatagaagaa attaccatcc ctgttattga
     4681 ttcaacgttg ttccgcttta actcaggtac agaaagtatt tattacataa gcaggattac
     4741 acttaataat gctggtaatc gaaaactatt tattgaattt gcctcatcac atgtgcccga
     4801 gggtcttggt tacccggagc tattgattga taagcgctca aatgaattga atctatcaga
     4861 atattcattt gcaaaatata ctgacaatcg cctcacatat aaatttggcg attttgccta
     4921 taacacttat tttacagtta acaaatcttt caaatttgac agtttttttg attataacgg
     4981 ttatagacat tttgcaattt ctatttcgcc tgacggtttt ctaatagtca gcaaggagaa
     5041 cacaagactt accatgaagc tggtagtgtt ttcagcaatt tttatactac tggctttaat
     5101 ctcaattata gtatatctcc tcatgtatgc cagaaaggcg gtccatttat ttagattaaa
     5161 tttcaaaacc cgtcttcaaa cctttgttat agccacccta acccttacgt ttgttctagt
     5221 ggcagtatca actcttgtat atattgaaga taacagtagg gatgatctgg aaaaacagtt
     5281 aacagaaaaa acgaactcag tacttataga gcttcagcac aagctttcgc cgatcacaaa
     5341 tttcaaaagt gaggatcctg atttcctaca tcagttatta cgtaaattct cgttagtatt
     5401 tttttctgat ataaatttgt atgataactc gggttatttg attgcaactt caagaccaga
     5461 aatatttgaa aaaaacctat tatcctcatt tatcaatcca ttagcttaca aggcaatatt
     5521 tactgataat aaattaaatt ttataaccga agaaaagatc ggttcactga aatattactc
     5581 ggcttatgtt ccaattaacc taaacaacga tcgccctatt ggtattgtaa accttccata
     5641 ttttgcccgt caaacagagt tcaccagatc atactatatt atgttatcat acttaattaa
     5701 tatttatgtt ataattggta taataggggc tttaatcgct attacttttt caagatattt
     5761 aacccggccc ctggtgcttc ttcagaagag tttagcaaca atcagaattg acgaacataa
     5821 cgaaaaaata gactggaata aaaaagatga aatagggacc cttatcaaag aatataactt
     5881 aatggtggac aaattagagc aaagcacata tcttctgaag cattcggaaa gagaaagcgc
     5941 ctggcgggaa atagcaatgc aaattgcaca tgaaatcaaa aacccactaa ccccaatgaa
     6001 actaaatatt cagtaccttg aaaagtcttt taaaaataaa gatccggatt ttgactcaaa
     6061 aattaattct atcagccaat cattaatcac acaaattgat gctttggata atgttgctga
     6121 gatgttttca aattttgcag aaacaagatt ttcagaattt gaaaaagtaa atttgaaaac
     6181 tattatagat tcgtcagtaa atttgtttga taaaaaaaac aatgtagtaa tatctataac
     6241 ttataccgat gccgatttgt ttactcttgg ttttgaaaaa gacatcttga gggcctttaa
     6301 taatattctc aaaaatgcaa tccaatcaat tgaaaatagc gaaaatgggg aaattaaaat
     6361 taccgcaaag cgagattcaa actttataac aattgaggta tctgacaacg ggaagggggt
     6421 ttcggaagaa atgaaatcta agattttcca gccatacttc acaacaaaaa caagtggaac
     6481 cggtttgggc ctggcaatcg ttaaaaatat tatgaacgaa attgggggta aggtaagttt
     6541 tgagtcaaac accggacaag gcacaacttt ctccttaatg tttccggaat cctcataaca
     6601 acaacaattt aacaaattac atctaaattt ctagaaaaat ttttacctac ttttggttgc
     6661 atgattaagg gtgctaatcc cataaaaaaa cttgccggcg aaactgctat atatggtctt
     6721 ggtacgatgg ttccaagatt cctaaattat cttcttgttc cattatacac tatttacgta
     6781 tttactaagg ctgaatatgg ccaggttacc ctgttatatt catacatcgc catattactg
     6841 gttttgctga cctacggaat ggagacggca tttttcaggt atgcaaacaa aagtaaagat
     6901 gctaaaaagg tatttaatac tgctacatct tctgtattaa ttacatcgac attgtttttg
     6961 ctcattattt ttgttttttc cagtgatatt tctagattaa tacaatatcc atccaacaat
     7021 gaatatgtgt taattgtgtc cttaataatt gctgttgatg ctatcaccgc tctgcctttt
     7081 gcatatctca gatatcaaaa taaacctttt aagttttctg taattagaat aattagtgtt
     7141 gttataacta tttcgctaaa tctcattttc ctcgttgtga tccccaatta ttatggcgat
     7201 aacttcaggg ccctccctgt atatagaagc actagccttg tgacgtttgt gtttattgca
     7261 aatctgattg gctctctgtc agcactactt atgttaagta gagagtttgg ttatttccga
     7321 tttaagattg acaccaccct gctgaaacag ttacttaaat atggattgcc aatacttatt
     7381 atttctctat cctttatgat cacggaggtc gctgataaaa tacttctcaa atattttttg
     7441 cctgatgggg cggatgcaga ttcgcaaatt ggaa
//
LOCUS       DASCQP010000363         1545 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001349266, whole genome shotgun sequence.
ACCESSION   DASCQP010000363 DASCQP010000000
VERSION     DASCQP010000363.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1545)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1545)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1545
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001349266"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1370)
                     /locus_tag="QF480_06210"
     CDS             complement(<1..1370)
                     /locus_tag="QF480_06210"
                     /inference="COORDINATES: protein motif:HMM:NF014696.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HJN06191.1"
                     /translation="MKKTKKNSKFFISLIIMGLILSSNTAIAQKQQPNTSEYTVELHE
                     HAPVVKELEGLLDNNPEMKETLLTSLNIAVKAAQNNLNKDLYKAIDRVFQGDGWPVTI
                     NSYLNYLDLYIRLIPDEVNDPRYPNAWKSNGKQNGYNQKVYDLLCQYYWLVNQEIPSP
                     NRTMQSYKEFASWLQRCAREWGSFLDTDGSLDKETLISFKYNPMYNFSLYSDSHKSWH
                     TFNEFFYREFNQAAQGTGITPLRPIAEPNNNQTIVAPADCTFKHDFPIDDFGNVLDKA
                     GNKTNIKIKGTHHIGTVAHLLGGSSYAKDFYGGTFVHYFLSPFDYHRFHTSVGGKVLK
                     IEAIQAKVYLDVNITNDGQWDAPDETINGYEFIQSRGVVIIDAGPVVGKVAIIPIGMA
                     QVSGVDMYTELQGKTVQKGQEFGRFKFGGSDIILLFENAPDLYLFKNDPTHTPIHFQY
                     GQTVGY"
BASE COUNT          455 a          283 c          264 g          543 t
ORIGIN      
        1 caataaccta cagtttgacc gtactgaaaa tgaataggtg tgtgtgttgg gtcatttttg
       61 aaaagataca ggtcaggtgc attttcaaac agcaagatga tgtcagaccc tccaaattta
      121 aaccttccaa attcctgacc tttttggact gtctttccct gaagctcagt atacatatct
      181 acacctgaaa cttgtgccat accgattgga ataatagcaa cttttccaac aactgggcca
      241 gcatctataa taactacacc acgcgattga ataaattcat agccatttat agtttcatca
      301 ggagcatccc attgtccatc attagttatg ttaacatcta aatatacttt agcttgaatg
      361 gcttcaattt ttagtacttt tcctccaact gatgtgtgaa aacggtgata atcaaaaggg
      421 cttagaaaat aatgtacaaa agttccgcca taaaagtctt tagcataact acttcctccc
      481 aagagatgag caaccgtgcc aatatgatgc gttcctttaa ttttgatatt ggttttattc
      541 ccagctttat ccaatacatt accaaagtca tctatcggaa agtcgtgttt gaatgtgcag
      601 tctgctgggg caacaattgt ttggttatta ttcggttcag caattggtcg caatggcgtt
      661 attcctgttc cctgagctgc ttggttaaat tctctgtaaa aaaactcgtt aaaagtatgc
      721 caacttttgt gcgagtcaga ataaagggaa aagttataca ttgggttata tttaaatgag
      781 atcaaggtct ctttatccaa tgaaccatca gtgtcaagaa aagaccccca ttctctagca
      841 catctctgaa gccaggaagc aaactcttta taactttgca tggttctgtt cgggctaggt
      901 atttcttgat tcaccaacca ataatattga cataaaaggt catacacctt ctggttatat
      961 ccattttgtt ttccattgct tttccaggca tttgggtaac gaggatcatt gacctcatct
     1021 ggaattaagc gtatgtagag atcaaggtaa ttcaagtaag agttaatggt tactggccag
     1081 ccatctcctt gaaaaacacg atctatagct ttgtacaaat ccttgttcaa attattttga
     1141 gccgctttaa cggcaatgtt taaagatgtc aataatgtct ctttcatttc tggattatta
     1201 tccaaaaggc cttctaattc ttttaccaca ggcgcatgct catgtaattc tacagtatac
     1261 tcagaggtat taggttgttg cttctgcgca atggcagtat tagaagataa aatcaatccc
     1321 attataatta atgagataaa aaattttgag ttttttttag tctttttcat ttctttttga
     1381 tttagttagt tgttatgtat gtcttcgaac aaacttgaac ttttagggtc aaaaattaag
     1441 agagtgttaa tacaaaacta attgtttttt ttgatattgt ttttttcttt catttagcgt
     1501 tttatttttg attcttttac gttgttttaa tttacgatca ccacg
//
LOCUS       DASCQP010000364         1874 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001355253, whole genome shotgun sequence.
ACCESSION   DASCQP010000364 DASCQP010000000
VERSION     DASCQP010000364.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1874)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1874)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1874
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001355253"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..815)
                     /locus_tag="QF480_06215"
     CDS             complement(<1..815)
                     /locus_tag="QF480_06215"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013087.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HJN06192.1"
                     /translation="MNNYGSDEKSALQAKFDAQKIAFGPIMFQAAIALRNLGILEYLL
                     QNKKKGANIETIASALKISVYGIKVLLEAGLSLEMVLKKDNKFFITKTGYFILSDELT
                     KVNMDFVQDVNYDGMKFLEGSIINGKPEGLKVFGNWDTVYEALSALPVEVRKSWFAFD
                     HYYSDFAFPEVLPHLFNSNPRNILDVGGNTGKFSIFCAQNIKDVHLTILDLPGQIKDA
                     KAKIKEARLEDRISTKSINLFDNSLNFPYGYDIIWMSQFLDCFSQEEILGLLI"
     gene            complement(821..1717)
                     /locus_tag="QF480_06220"
     CDS             complement(821..1717)
                     /locus_tag="QF480_06220"
                     /inference="COORDINATES: protein motif:HMM:NF015251.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06193.1"
                     /translation="MSPWKGKTKGGLTGYRIFIFILKYFNLRAAYLLLYFVALYFVLF
                     AHKARKPMYYYFNSIIGYGFFKTAYYLYLNNLTFGKVIIDKVVLMAGLPNKFKFDFDG
                     EKHLHYMSKNEGGLIISSHVGNWEIAGHLLDRIKTPVHIVMLDAEHRRIKALLDNFMT
                     DKSMNIITIKDDMSHLFKIKEVLQNNELVAIHGDRFLPGSKTLSCNFMGQNAEFPTGP
                     FYIAMKYNKPVTFVSAIKETNTQYHLKATKPKVYENSKSIMKRDNVLRQILGDYIDEL
                     QTTLRNHPEQWFNYYYFWNEKK"
BASE COUNT          592 a          343 c          287 g          652 t
ORIGIN      
        1 cttattaata aacctaatat ttcttcttgt gagaaacaat ccaaaaactg gctcatccaa
       61 ataatgtcat atccgtatgg gaagtttaag gaattatcaa ataagtttat tgattttgta
      121 gatatcctat cttcaagtct ggcttctttt attttggctt tagcatcctt aatttgtccc
      181 ggaagatcaa ggattgttaa gtgtacatct ttgatgtttt gagcgcaaaa tattgagaac
      241 ttacctgtat taccacctac atcaagaata ttccttgggt ttgaattaaa aaggtgtggc
      301 aatacttcag gaaatgcaaa atcggaatag taatgatcga aagcaaacca actttttcta
      361 acttccaccg gcaacgccga tagagcttca tataccgtat cccagttgcc aaaaactttt
      421 agaccttcag gtttaccatt aattattgaa ccttcaagga atttcattcc atcatagtta
      481 acatcctgta caaagtccat attcaccttg gtaagttcat cacttagaat gaaataacct
      541 gttttggtga taaagaattt attatctttt tttaatacca tttcaaggct aagcccagct
      601 tctaacagta cttttatccc gtaaacagaa attttaagcg cgctagcaat tgtctcaata
      661 tttgcacctt ttttcttgtt ttgtaataaa tattcaagaa tccctagatt acgtagagca
      721 attgcagctt gaaacatgat aggaccaaag gctattttct gtgcatcgaa ttttgcctgt
      781 agagctgact tttcatcgga accatagtta ttcatactcc ctatttcttt tcattccaaa
      841 aataataata attaaaccac tgttcgggat ggttgcgtaa tgttgtctga agttcatcaa
      901 tataatcacc aagtatttgt ctcaatacat tgtctctttt cataatactc tttgaatttt
      961 cgtagacttt gggcttggtt gctttaagat ggtattgtgt attggtttct ttgatagcag
     1021 acacaaaggt tacaggctta ttgtatttca tagcaatata aaaaggacca gtaggaaatt
     1081 cggcattctg ccccatgaag ttacatgaca acgttttcga gccgggcaag aatctatcac
     1141 catgaatggc aactaattca ttgttctgta atacttcttt tattttgaaa aggtgcgaca
     1201 tatcatcttt aattgtaata atgttcatgc tcttatcggt cataaagttg tcaagtagtg
     1261 ctttaatcct tctgtgttct gcatcaagca ttactatatg aactggtgtt tttattctat
     1321 ccagtaaatg accagcaatt tcccaattac ctacatgtga actaataata agccctccct
     1381 cattcttgga catataatgg agatgtttct caccatcaaa gtcaaacttg aatttatttg
     1441 gtaatccagc cattagcaca accttatcta ttattacttt gccaaatgtt aagttattaa
     1501 gataaaggta gtacgctgtt ttaaaaaatc cgtatcctat tatagaatta aaataataat
     1561 acataggttt acgtgcttta tgagcaaata gcacaaaata caaggctaca aaatagagca
     1621 gtaaataagc tgcccgtagg ttgaaatact ttaatataaa aatgaaaatc cggtaaccgg
     1681 ttaacccacc ctttgttttg cctttccagg gtgacattag ttatttgaat gattcaaaat
     1741 ataattgtaa aggtcttcta atgtaataat cttttgtatg tctgcgcttg acaccttcaa
     1801 cccaaatttt tgttcaataa taactgcgat atcaacaaaa tccagacttt ctatatcaag
     1861 atcatccttc atta
//
LOCUS       DASCQP010000365         2538 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001355659, whole genome shotgun sequence.
ACCESSION   DASCQP010000365 DASCQP010000000
VERSION     DASCQP010000365.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2538)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2538)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2538
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001355659"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..619
                     /locus_tag="QF480_06225"
     CDS             <1..619
                     /locus_tag="QF480_06225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HJN06194.1"
                     /translation="KIVFSVYAAAALMALMKKQRDVTGLSLFTDKVELHSQARSSTIH
                     QKYLYTELEKLLDLKSLGTDNYTNVTDSLHDIAEMIHRRSLVIIFSDMFDDINRQEEM
                     FSSLQHLKHYKHEVILFHVIDKKVEEELELEDRPYKFIDMESGELLRVNPVEIREKYQ
                     EAAKTAKHELEMRCGRYGIDYVEADINNGFEGILLPYLLKRKKLH"
     gene            complement(1168..>2538)
                     /locus_tag="QF480_06230"
     CDS             complement(1168..>2538)
                     /locus_tag="QF480_06230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06195.1"
                     /translation="VGDYHLEFGQGLTLWSGLSFGKSADGVLMKKFGRGIRPNTSANE
                     NRFFRGVATTINWNGFSITPFYSSNNVDGNIIPLIYNEQEGVSSIIETGMHRTINELL
                     DKNTINITAFGGHIGYQHKMFATGITIYNTELNKPLVLSDEIYKQFNFQGNEVANFGV
                     DMALNIKNINFFGEFSGSSNGGLAGITGINTFLDERFFLTIVYHNYGKNYQNIYSNPF
                     AESSAIANETGVYFGFKALVHKFFSISGYIDHYQFPWLKYQVSSPSTGRDYLAQINFS
                     PQKDINAYLRYRTKSKQENYKKDYQYIPLISDIKRHELRFFISYNAYKNIILKNRIDM
                     VVYKNSFNAPEKGWLIYQDVLYRSVNFPLEATFRYALFATDSYNSRIYTYENDVLYAF
                     SVPSYFGNGQRWYLMLKWKIIPQLSMWLRFARTTYFNKNTVGTGNDLIDGNSKSEVKI
                     ELKITL"
BASE COUNT          846 a          399 c          408 g          885 t
ORIGIN      
        1 taagattgtt ttttctgttt atgcagcagc agcacttatg gctctaatga aaaagcaacg
       61 agatgttact ggtttgagtt tatttaccga taaagttgag ctacactcgc aagcacgatc
      121 aagtactata caccaaaaat acttatatac tgaacttgaa aaactactgg atttaaagag
      181 cttaggaaca gataattata ctaatgttac agattcgttg cacgatattg cagagatgat
      241 tcataggcgg tcgttggtaa ttattttcag tgatatgttt gatgacatta acagacagga
      301 agaaatgttt tcgtctttac aacatctaaa acattataag catgaagtca ttttgtttca
      361 tgttattgat aaaaaggtgg aggaggagct cgaactagag gataggccat acaaattcat
      421 tgacatggaa agtggcgaat tattgagagt taatcctgtt gaaatacgag aaaaatatca
      481 agaggctgca aaaacggcta aacatgaatt agagatgcgt tgcggccgat acggtataga
      541 ttatgttgaa gctgatataa ataatggttt cgagggaata ttacttcctt atttgttgaa
      601 aaggaagaag ttacattaat aaagctctaa ctgattctat tattgttgtc agattctact
      661 ttttaaactc aaactttctg aaataaaaat cagcttttta aacctacaat tcagtaaatt
      721 attactctga tatttttgtt attgatatat ctttgtttcc tacaatagat ttattatgag
      781 ttactatcat attataatgg ttgttattac tgtattagta atttttttat cctaccttac
      841 tttatcaatt attattgcaa gtaaaacaac aaattctcaa ttaagcttta taaaactttt
      901 tctaataagt tttttcttaa cacctatagt aggtacagct ttattaatca attcgaaaat
      961 gaaatcattt aataatttat atcactacaa gtgtcctagg tgtaattatt attttactga
     1021 agaacaggat agttgccatc aatgtgtaaa agatggcttt aacccgccat taaaaaaagt
     1081 taagaaatta gggctgccta attattatta acgaataaat aattattttt aaactgtgtg
     1141 tcaattaatt taaagcgaag atcgtaccta taaagtaatt ttgagttcaa tctttacttc
     1201 acttttcgaa tttccatcaa taagatcgtt accagtgcca actgtatttt tattgaagta
     1261 agtagttctg gcaaatctta accacattga aagctgtggt attattttcc attttagcat
     1321 taggtaccat ctttgtccgt taccaaaata tgatgggaca ctaaaagcat ataatacatc
     1381 attttcgtat gtatatatac ggctattgta actatcggta gcaaaaagtg catatctaaa
     1441 tgttgcttca agaggaaaat taacagaccg gtataagaca tcctgataga ttaaccatcc
     1501 tttttcagga gcattaaaac tattcttgta aacaaccata tcaatcctgt ttttcagaat
     1561 gatgtttttg taggcattgt atgaaataaa gaacctcaat tcatgtcgtt taatatcact
     1621 tattaaaggt atatattggt aatctttttt atagttttcc tgcttgcttt ttgtacggta
     1681 tcttaaatat gcattgatat ctttttgagg actaaaattt atttgtgcaa gataatcacg
     1741 accggttgat ggggaactaa cttggtattt taaccatgga aattgatagt gatcaatata
     1801 gcccgaaatg gaaaagaatt tgtgtactaa cgctttaaat ccaaaataaa ccccagtttc
     1861 gttagcaatt gcactgcttt cagcaaaagg gttggaataa atattttgat aattttttcc
     1921 ataattatga taaactattg ttaagaaaaa acgttcatca agaaaggtgt tgattccagt
     1981 aattccagca agacccccat tcgacgaacc agagaactct ccaaaaaaat tgatattctt
     2041 gatatttaaa gccatatcta ctccaaaatt tgcaacttca ttaccttgga aattaaattg
     2101 tttatatatc tcatctgaga gtaccaaagg cttgtttaac tctgtgttat atattgttat
     2161 tcctgttgca aacattttgt gttgatatcc tatatgtcct ccaaaggccg taatgttaat
     2221 tgtgtttttg tcaagtaatt cgttaattgt gcgatgcata ccggtttcaa taatgctact
     2281 cacaccctcc tgttcattgt agatcaaagg aataatatta ccatcaacat tatttgatga
     2341 ataaaatgga gtaatggaaa agccattcca gttaattgtt gttgccacgc ctctgaaaaa
     2401 tctgttttca ttggccgaag tattcggacg tattcccctt ccgaattttt tcattagaac
     2461 accatctgct gacttaccga atgatagtcc actccatagc gtaagtccct gaccaaactc
     2521 aaggtggtaa tctccaac
//
LOCUS       DASCQP010000366         8957 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001355759, whole genome shotgun sequence.
ACCESSION   DASCQP010000366 DASCQP010000000
VERSION     DASCQP010000366.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 8957)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8957)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8957
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001355759"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            164..643
                     /locus_tag="QF480_06235"
                     /pseudo
     CDS             164..643
                     /locus_tag="QF480_06235"
                     /inference="COORDINATES: protein motif:HMM:NF033684.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transporter suffix domain-containing protein"
     gene            676..3711
                     /locus_tag="QF480_06240"
     CDS             676..3711
                     /locus_tag="QF480_06240"
                     /inference="COORDINATES: protein motif:HMM:NF014900.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate formate lyase family protein"
                     /protein_id="HJN06196.1"
                     /translation="MDKLKSSISKNKFENDGLKASQLLNDTLNGIAVALNGSENFHKE
                     MVGDLGPIDAIIGIKTQDESIKTTINIKEGVFSVIEDFCDVDADATLIFDSIEEFNNY
                     VNANSDEAIRMFLASRVRLEGNLSIFGYVNYLISLLSWQDDIKDFDLQKNIHEKQNLA
                     AAKSAARVGRNMKTNRIRTRLKAEKVDPGVLWLDEPYLSKYTIEDFPRLVKFKHDHLN
                     TMPEVTSEQGKLLTDYYVANGFETQKDGTPWNPILRTAKGFEYLMKNKKPLIRENDLL
                     AGTVTPNPICGSVNQPYTVGWSIWGELNTIAYRELDPFSITPETKNTLSKYVFPFWRD
                     KYIQQKWKVDYDYPLSAKINDRMFCFGLWGLVSLNPGSGGYDKVVKKGIGSHIKEIDE
                     HLIEFGKATQEYQKNNIEKKHSWEAMRASLNGMLAYTKNLAKVTKDELAKETNLLRKK
                     ELENIYASLQQVPEKPARTLHEAVQSLWIMFIGTCLDAMDESITIGRLDQILQPYFEA
                     DIKKLPENEREAYIESAIELVGSLFLRFTNHLVAAATVASWQNSGAPGVTSVIVGGVT
                     PDGDDAVNDMTYIVLKVAEMLSLNDPDMDARYMVGVNSNDYIRRVAELNYITSGTPSI
                     HNDEAIIKALSSHGWDVKDVRDWVSCGCVEPIIHGKHFAATGDLDSNLMVPLTMAIYN
                     GYHPSARWDFGPKTGKLTDFKTFDEFYAAFEKQFDFIYKQGTEASLQILKVQQHLMPA
                     PLNSALLENCIKDGVGMTHGGAKYNSSGGAFTALSDVVDSLLVIKKVIFEDKKYTFDE
                     LKDAMDADFIGHKSLHSYISNRVPKFGSGDESGRLMVDRVTTMIADYMHSHDNGRGGC
                     YFPGYRTNNNHTVYGRVSGASASGRHAGKPFTSGLTPNPAASNNILDNLNDVASINPL
                     NCDNNYTFNVRVSFSEKDENSHKQNVDHLANYIQTYFINGGMQIQCNVVDTDTLKDAM
                     AHPELYQDLIARVSGYTGYYTRMQQDLQLEIIGRTEFKI"
     gene            3716..4327
                     /locus_tag="QF480_06245"
     CDS             3716..4327
                     /locus_tag="QF480_06245"
                     /inference="COORDINATES: protein motif:HMM:TIGR02494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0043687 - post-translational protein
                     modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycyl-radical enzyme activating protein"
                     /protein_id="HJN06197.1"
                     /translation="MRANLIFDIKHNSLEDGPGIRSVVFFKGCPLDCVWCQNPESKKV
                     SSELWWEKEKCIDCGECIKVCLEGAISNSNPFYIDRSLCTLCFECVEVCPSKAMSQVG
                     QEMNVEEIVGQVIKYKPFFDRSRGGVTLSGGEPTLSIEFTSKLLKKLKKEGVPTLVET
                     AGLFNFELFESLILPFVDIIYFDIKFIDPIQHKQLVELVMNSF"
     gene            4393..4638
                     /locus_tag="QF480_06250"
     CDS             4393..4638
                     /locus_tag="QF480_06250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06198.1"
                     /translation="MIPGITDSETNIQQIIEFYNEHTVKKAVLLPNNPAWIQKLERSG
                     QHIIFDTDDPICKLYDIEKEKKLKRYFSDNGIEIAVG"
     gene            complement(4663..5742)
                     /locus_tag="QF480_06255"
     CDS             complement(4663..5742)
                     /locus_tag="QF480_06255"
                     /inference="COORDINATES: protein motif:HMM:NF015684.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HJN06199.1"
                     /translation="MLKIIDIYIIKKFLGTFFYAISLLILIVIIFDVSENLDSFIQKD
                     APLKAIVFDYYLNFIPYFINLFIYLFTFISVIFFTSKMAGDTEIIAILSSGVSFRRLL
                     YPYLISAVLLAMLSFYLGNFLIPKTNEARREFKNKYMENLTKDKSRDLHIQIAPNTFV
                     YVQRYNSQLKTGYKFSLEKFDGQDMTYKLMADLIKLDTSTGYWTLKNYYIRTIDSSGQ
                     SFVKGVEMDTTFLLKPEDLYKIKEEFEEMDFYELADYIISEKQKGSKAYKKFEVEKNK
                     RTSGPVAIIILTIIGVALSSRKVRGGIGMHLGAGIGLTFSYILLMQVSTVFSTFGNLS
                     PIIAAWIPNFIFLIIAIILLQKAPK"
     gene            complement(5993..7123)
                     /gene="tgt"
                     /locus_tag="QF480_06260"
     CDS             complement(5993..7123)
                     /gene="tgt"
                     /locus_tag="QF480_06260"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002560222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008479 - tRNA-guanosine(34) queuine
                     transglycosylase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HJN06200.1"
                     /translation="MQFKLQTTDINSSARAGELITDHGNIQTPIFMPVGTIGSVKGIH
                     ISDVKNDINADIILGNTYHLYLRPGLDVIEQAGGLHSFIGWEMPILTDSGGYQVYSLA
                     DRRKLSEEGVVFQSHIDGSRHSFSPENVINIQRSIGADIVMAFDECTPYPCDYKYADN
                     SMKITHRWLDRCIARFIETESKYGFQQSLFPIVQGSTYPDLRKQSAEYIASRGAEGNA
                     IGGLSVGEPAEAMYEMTELVCNILPEDKPRYLMGVGTPENILEGISLGVDMFDCVMPT
                     RNGRNGMLFTKNGIINIRNEKWKNDFTSIDNEGDSIVDSQYTKAYLRHLFIAKEMLGS
                     MIASQHNLSFYLWLVRESRKHIITGDFKDWKDKMIVNVSRRI"
     gene            7390..7851
                     /gene="tnpA"
                     /locus_tag="QF480_06265"
     CDS             7390..7851
                     /gene="tnpA"
                     /locus_tag="QF480_06265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013445437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
                     /protein_id="HJN06201.1"
                     /translation="MANTYTQIYIQFVFAVQNRASLIHYTWKDELYRYITGIVQNNKH
                     KLIAINGMPNHVHILIGYKPHQLIPDLLQDIKGSSSGWINKNDFNNTKFNWQESYGAF
                     SYSNSHIDRVVKYIMNQEQHHKKNTFREEYLELLTRFNINYDERYILKDIY"
     gene            7991..>8957
                     /locus_tag="QF480_06270"
     CDS             7991..>8957
                     /locus_tag="QF480_06270"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HJN06202.1"
                     /translation="MNFSISLLQLSLFELILAALFLLSAIIQLLYYFVVFSKLAFYKQ
                     ESSRSKELPPVSVIITAHNEDYNLQRNLPAILDQNYPDFEVVVVNHASSDNTADVIMD
                     LQRKYSNLKIVNIERELNFFKGKKFPLSIGIKSAKHEILLLTDADCKPNSDKWIESMA
                     SKYASQTEVVLGYGPYNSSGGFLNLFIRYDTFMIAMQYFSFALMGIPYMGVGRNLSYR
                     KSLFFKNKGFTSHYNIPSGDDDLFIMQVANRSNTKIDISPDSFMYSEPKHNLSTWFRQ
                     KQRHLSTSKHYSFIFKILLGSFSSSQLLFYVTLVILISKNVLLFPV"
BASE COUNT         3047 a         1484 c         1530 g         2896 t
ORIGIN      
        1 ggcaattaat gagtagaaca agcaaaacgc acatcatcca tttagagtag aaataatttt
       61 gttttaatac cgattacctt tattttagct aaattcaaaa tcttatatga agtactcatt
      121 taattagaca ataatcatga aaagaaccta gaaattttac ctcggaattg cactttttac
      181 ctactcatgg ataccatata tttttgtttt tacgataatg ccttttctgc attttaatac
      241 tacagaggct ttatcaatat cgtcaataac tcttatctct gctgaatcag cctttgctat
      301 ttcggtaata ttacttggca aggattttat taatatgatt aaaacaaaat tcaagactat
      361 attttctaag aaaggaggtc atacgttcaa gccaataagt aagttacggt accgaatagg
      421 aataattcta tttattctaa ctttatctat accttcaata ttaactgaag tagttcttta
      481 ttatgattat gttgatataa ttggtctaaa taatttgctt tatatgttct tatcttttga
      541 tgtcatattt atttccagct tattcatact tggaggggag tttattgaca aactaagagg
      601 actctttact tacgcagaag tcattgaaaa gagtaatatt taacccaccg aaacataatc
      661 gaaaagtctt aaaaaatgga taaacttaaa agtagtatct ctaagaataa gtttgagaat
      721 gatggcttaa aggcatccca attattaaat gatactctaa atggaattgc tgtcgcacta
      781 aatgggagcg aaaatttcca caaggaaatg gtaggtgatc ttggtccaat tgatgctatt
      841 attggaataa aaacacaaga cgaatccatc aaaacaacta ttaatattaa agaaggcgta
      901 tttagtgtta ttgaagattt ttgtgacgtt gatgcagatg caaccttaat tttcgactca
      961 attgaagaat ttaataatta tgttaatgcc aattctgatg aggcgataag aatgttttta
     1021 gccagtaggg ttcgcctcga aggcaacctt tctattttcg gatatgttaa ctatttaatt
     1081 agtttgttgt catggcaaga tgatatcaag gactttgatc tccaaaaaaa tatacatgag
     1141 aagcaaaatc tagcggcagc taaaagtgca gcaagagttg gcagaaatat gaagactaat
     1201 cgtataagaa caaggcttaa agccgaaaaa gttgatcctg gtgttttgtg gttggatgaa
     1261 ccttatctgt caaaatatac tattgaggat tttccgcggc tcgtaaagtt taaacatgac
     1321 catctgaaca caatgcctga agtgacctcc gagcaaggca aattactcac tgattattat
     1381 gttgcaaacg gttttgaaac tcaaaaggat gggactccat ggaatccaat actccgtact
     1441 gctaaggggt ttgagtatct tatgaaaaat aaaaagccac ttattcgtga aaacgacctt
     1501 cttgcgggga ctgttacccc aaatcctatt tgtggttcag ttaatcagcc ctatactgtt
     1561 ggctggtcaa tatggggtga actaaacaca attgcttatc gggagcttga ccctttttct
     1621 attaccccag aaacaaagaa tactcttagt aagtatgttt ttccattttg gagagacaag
     1681 tatattcagc aaaaatggaa agttgattat gattatcctt tatcggctaa aattaacgat
     1741 aggatgtttt gttttggatt atggggactt gtatcattaa atccaggaag tggcggttat
     1801 gataaggtgg ttaaaaaggg cataggaagt catattaagg aaattgacga acacttaatt
     1861 gagtttggta aggcaaccca agaataccag aaaaataata ttgaaaagaa gcatagttgg
     1921 gaagcaatga gagcctcatt gaatggtatg ttggcatata caaagaatct cgcgaaagtc
     1981 accaaggatg agttagctaa agaaacaaat cttttacgaa aaaaggagct tgaaaatata
     2041 tacgcttcac tgcaacaagt acctgaaaaa ccagcacgaa cacttcatga agccgtacaa
     2101 tctttatgga taatgtttat tggtacttgt ttagatgcaa tggatgaaag tattacaatt
     2161 ggcaggcttg atcaaatctt gcaaccatat tttgaagccg atattaagaa attacctgaa
     2221 aatgaacgag aagcatatat agaaagtgca attgaactag ttggtagttt gtttttacgt
     2281 tttaccaatc acttggttgc agcagcaacc gttgcctcct ggcaaaattc tggagcacca
     2341 ggcgttactt ctgtaattgt tggtggtgtt actcctgatg gtgatgatgc agtgaatgat
     2401 atgacctaca tagttctaaa agttgccgaa atgctatcac ttaacgatcc ggatatggat
     2461 gctcgttata tggtaggtgt taatagtaat gattatatta gacgtgttgc tgagttaaac
     2521 tacataacaa gcggaactcc ctcaattcac aacgatgaag ctattatcaa agctttatca
     2581 agccatggat gggatgttaa agatgttcgt gattgggttt catgtggttg tgttgaacca
     2641 ataatccatg gtaagcactt tgccgcaaca ggggatttgg actcgaatct gatggttccg
     2701 ttaactatgg ctatctataa tggttatcac ccttctgcta gatgggattt tggtcccaaa
     2761 acaggtaaac taactgattt taaaactttt gatgagtttt atgctgcttt tgaaaaacaa
     2821 tttgacttta tttataaaca aggtacagaa gcttcattac aaatacttaa ggttcagcag
     2881 catttgatgc cagctccact aaattctgct ttactggaga attgtattaa agatggtgtt
     2941 ggaatgacac atgggggtgc aaaatacaac tcttcaggtg gtgcatttac agcattatcc
     3001 gatgtagttg actcattact cgtgattaag aaagtgattt ttgaagataa aaaatacaca
     3061 tttgatgagc ttaaagatgc tatggatgct gactttatag gacataaatc gctgcattca
     3121 tatatttcaa atagagttcc taagtttggc tctggtgacg aaagtggtag acttatggtt
     3181 gatcgtgtta caaccatgat tgcagattat atgcatagtc atgataatgg tagaggaggg
     3241 tgctatttcc ctggttatcg aacaaacaat aatcatacag tttatggacg tgtttcaggt
     3301 gcgtcggcat caggtaggca tgccggtaaa ccgtttactt cggggctaac accaaatccg
     3361 gcagcatcaa ataacatact tgataactta aatgacgttg caagtattaa tcctttaaat
     3421 tgtgataata attacacttt taatgttcgt gtttcttttt cagaaaaaga cgaaaattca
     3481 cataaacaaa atgttgacca tcttgcaaat tatatacaaa cttattttat taatggaggt
     3541 atgcaaatac aatgtaatgt tgttgatacc gatacactta aagatgcaat ggcacaccca
     3601 gaactttatc aggatttaat agcccgtgta tctggatata cagggtacta cactcgtatg
     3661 cagcaagatt tgcaattgga aattattgga agaacggagt ttaagattta agcacttgcg
     3721 agcaaactta atcttcgata ttaaacacaa ctcgttagaa gacggtcctg gaattcgctc
     3781 ggttgttttc tttaaaggtt gtccgctaga ttgtgtctgg tgtcagaatc cagaaagcaa
     3841 gaaagtttca tccgagttat ggtgggagaa ggaaaagtgt atagattgcg gggaatgcat
     3901 taaagtttgc ctggaaggag ctatatcaaa cagcaatcct ttttatattg atagaagtct
     3961 ttgcacgctt tgtttcgaat gcgtggaggt ttgtccctca aaagctatga gccaagttgg
     4021 tcaggaaatg aacgtggagg agatagtagg gcaagtaatt aaatacaaac cttttttcga
     4081 tagatccaga ggtggggtta ctttatcagg aggagagcca actttatcaa tagaattcac
     4141 ttcgaaattg ctaaaaaaat taaaaaaaga aggagttcca actttggtag aaacagcagg
     4201 gttgtttaat ttcgaacttt ttgagtcgct aattcttccc tttgttgata ttatttattt
     4261 cgatataaaa tttattgatc caatccaaca caagcagctt gtggagttag taatgaactc
     4321 attttagaga attttattaa attaaacagc aaatctcaag tcgaagattt tgaactgctg
     4381 tcacgaacac ctttgattcc gggaattact gatagtgaaa caaatatcca gcagataatt
     4441 gagttttata atgagcatac ggtaaagaaa gccgtgctat tgccaaacaa tccggcctgg
     4501 attcagaaac ttgaaagatc aggacagcat attatattcg acactgatga tccgatatgt
     4561 aagttatatg acattgaaaa agaaaaaaag ttaaaacgct acttttcaga taatggaatt
     4621 gagatagctg ttggataatt aacgtgtcag tctaacatta cctcacttag gtgccttttg
     4681 taataaaatt attgcaataa tcagaaaaat gaagttgggt atccaggctg ctattattgg
     4741 tgataaatta ccaaatgttg aaaatactgt tgaaacctgc atcaacaata tgtaagagaa
     4801 tgtgagtccg attccagcac caagatgcat tccaatacca ccccgcactt tcctacttga
     4861 taatgcaaca ccaataatcg taagtataat tatggctacc ggacctgatg ttcttttatt
     4921 tttctcaacc tcaaattttt tgtacgcttt ggatcccttt tgcttttcag aaattatata
     4981 atcggcaagc tcataaaaat ccatctcttc aaactcttct tttattttat acaaatcctc
     5041 aggctttaac aaaaacgtcg tgtccatttc aacaccctta acgaaacttt gtccactact
     5101 gtcgatagtt ctgatataat aattcttgag tgtccaatag ccagttgatg tatctagttt
     5161 tataagatct gccatcagct tgtatgtcat atcttgacca tcaaattttt caagtgaaaa
     5221 tttatatcca gtttttaatt ggctattata ccgttgaaca taaacaaaag tattaggtgc
     5281 aatttgaata tgtaaatctc tcgacttatc tttcgtaaga ttttccatgt acttattctt
     5341 gaattctctc ctagcttcat ttgtttttgg aattaaaaaa ttgccaagat aaaacgaaag
     5401 cattgccaat aatactgcgg aaatcaaata aggataaagt aacctgcgaa aacttacgcc
     5461 actacttaat atcgcaataa tctcagtatc accagccatt ttggatgtaa aaaagataac
     5521 cgaaataaat gtaaataagt aaataaaaag gttaatgaaa tacggaataa aatttaggta
     5581 ataatcaaat actattgctt ttaaaggagc atctttctga ataaagctat caagattttc
     5641 actaacatca aaaataataa ctatcaaaat caacaatgaa atggcataaa agaaagttcc
     5701 aagaaatttc ttaattatgt atatgtcgat tatttttaac attaaacctt agtaactaat
     5761 catttcaccg aaatattata attatcattt agtttgtaaa gattattttt tctttgtgct
     5821 tcctttgcgc ataccttagt gctacttagt ggttaagttt ttaccacaaa ggtgaacaaa
     5881 gtacatcaca aaggtgcaca aagtcaaata aaagcattca atatcagaat catacatcat
     5941 tttctattct actgcttcaa ttctgtttag taataaactt tatactgaaa attcatattc
     6001 gtcttgaaac atttacgatc atcttgtctt tccaatcttt aaaatcaccg gtaataatat
     6061 gctttcttga ttcgcgaact aaccataagt aaaaagaaag attatgttga cttgctatca
     6121 tacttcctaa catctcctta gcaataaaca aatgtcgtaa ataagctttt gtatattgac
     6181 tatcaactat tgaatcaccc tcattatcaa tacttgtaaa atcatttttc cacttttcat
     6241 ttcttatatt gataattccg ttcttcgtaa ataacattcc atttctgcca tttcgggttg
     6301 gcataacgca atcaaacata tcaacgccaa gagaaattcc ttcaagaata ttttctggtg
     6361 ttcccactcc catcaaataa cgtggtttat cttcaggaag tatattacat actaattctg
     6421 tcatttcata cattgcctcg gctggttctc caactgataa accacctata gcatttccct
     6481 cggctccacg agaggcaata tattcagcag attgctttcg taagtcgggg tatgtacttc
     6541 cctgaacaat tggaaataag ctttgctgga acccgtactt ggattctgtt tcaataaatc
     6601 ttgcaataca tctatctaac cacctgtgag ttattttcat cgagttatca gcatacttat
     6661 aatcacatgg gtatggtgta cattcatcaa aagccataac aatatcggca cctatgcttc
     6721 tttggatatt aataacattt tcaggactaa aactatgtct cgatccatca atatgcgatt
     6781 gaaaaacaac accttcttct gaaagtttcc ttctgtccgc taacgaataa acctggtatc
     6841 caccactatc ggtaagtatt ggcatctccc atccaataaa actatgcaaa ccccctgcct
     6901 gttcaataac atccaaacca gggcgtaagt aaagatgata tgtattaccc aggataatgt
     6961 cggcattaat atcgttcttt acatcactaa tatgaattcc cttcacagaa ccaatagttc
     7021 caaccggcat aaatattggg gtttgtatat taccatgatc agtaattaat tccccggcac
     7081 gagcagagct attaatgtcg gtggtttgaa gtttaaattg catttaataa aaatttcggc
     7141 aaagatacgt caattcacat aagttgaata aatttgcatt gatatggttt taataatatt
     7201 ttagaatact gattcattat ttatgaaatt caatcagtat aatatttttg ctaatagtaa
     7261 tagtaattaa ccgactgaga tatttttgtt tattttttgt gtgtatattt tgtcccgtta
     7321 gggacataat atttctagaa atgaaacaac caataaaaaa agtcctatag ggacgttata
     7381 tacaagatca tggctaatac atatacacaa atatatattc aatttgtttt tgcagtccaa
     7441 aatagggcct cactaattca ttacacatgg aaagatgaac tttacagata tattacagga
     7501 atagtacaaa acaacaaaca taaactaatt gcaattaatg gaatgcctaa tcatgtgcac
     7561 atattaattg gttataaacc acatcaattg atacctgatt tgttgcaaga tataaaagga
     7621 tcatcttcgg gttggataaa taaaaatgat tttaataata ctaaattcaa ttggcaggaa
     7681 agttatgggg ccttttcata ttccaattct catattgata gagttgtaaa atacatcatg
     7741 aatcaggaac aacaccataa aaagaataca tttagagaag aatatcttga attgctaaca
     7801 aggtttaata ttaattatga tgaaagatac atattaaagg atatttatta atatgacgtc
     7861 cctaaaggga cttacgttaa atgctgatta taaaaatcta taaatattat gtccctaacg
     7921 ggacaagaaa ggtaaaacaa ccaggtttta aaactagcca aacctaactt aatataatta
     7981 tttgctatat atgaattttt caatatcact tctacagctt tcattatttg agctaatact
     8041 agcagctttg tttttacttt cagcaataat tcaactgtta tattattttg ttgtattctc
     8101 aaaattagcc ttctataaac aagaaagcag cagaagcaaa gaattgcctc cagtatcagt
     8161 aataattact gcacataacg aagattataa ccttcaaaga aatttacctg ccatacttga
     8221 tcaaaattat cccgattttg aagttgttgt tgtaaaccat gcttcctctg ataataccgc
     8281 agatgtaatt atggacctgc aacggaaata tagtaacctg aaaatagtaa acattgagag
     8341 agaattaaat ttttttaaag gcaaaaaatt tcctttatca attggaatca aatcagctaa
     8401 acatgaaata ctgctcctaa cagatgccga ctgtaaaccg aattctgaca aatggataga
     8461 atcgatggca tctaaatacg catcacaaac agaagtagta ttaggttacg gaccgtataa
     8521 cagctctggt ggatttctta atctgtttat cagatatgat acattcatga ttgcaatgca
     8581 atatttttca tttgcactaa tgggaattcc atatatgggt gtagggagaa atctgagcta
     8641 tcgaaaatca ctatttttta agaacaaagg ttttacatct cattataata ttccctccgg
     8701 tgatgatgat ttgtttataa tgcaagtggc aaacaggagt aatactaaaa ttgatatttc
     8761 tccagatagt tttatgtatt cggaacctaa gcacaatttg agtacatggt ttcgacaaaa
     8821 gcagagacat ctttccacaa gtaaacatta ctcattcatt tttaaaatat tactaggtag
     8881 ttttagcagt tctcaacttt tgttttatgt cacactagta atactaatca gcaaaaatgt
     8941 attgctgttt cctgtat
//
LOCUS       DASCQP010000367         2733 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001355801, whole genome shotgun sequence.
ACCESSION   DASCQP010000367 DASCQP010000000
VERSION     DASCQP010000367.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2733)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2733)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2733
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001355801"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(41..2476)
                     /locus_tag="QF480_06275"
     CDS             complement(41..2476)
                     /locus_tag="QF480_06275"
                     /inference="COORDINATES: protein motif:HMM:NF012801.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HJN06203.1"
                     /translation="MKTRIYGKTTLFNFLLFLFCISPLCSVLGQNNGIFSGRVLDQIT
                     SESLIGANIYLKKDMSVGTVSDFNGYFSLSLPIGNHIFIISYTGMKSQTVQINITSDS
                     TIHINFEMVPFSTNFDEIIVRAGKFDKSIETQTVSIEIMTPRLIDARNTESVETILDM
                     IPGLTILDEEPQIRGGSGFTFGVGSKVAVFIDNLPVTSGDAGKTNWSLIPVENIKQIE
                     VVKGASSVLSGASALSGAIYIRTNYPGIQPYTKVKVSTGFYSSPRSPAVAWWKGINYK
                     ASASFLHSQQLGNGHTDLVIGGMFSANESYLGAPVPGPLVIDTVPISDDEMANRKVRL
                     NFNLRHRSKKIKGLDYGLNGNIMYHKSSTVFAWLDDTTNFYRAYPGAVLLSKNTTFYL
                     DPFVNFYSSMGFKHEFTSRVMYSNNEANNNQSTKSLFVYNNYQFGKSFKNLGGLDFII
                     GVTNQYTYSYAHLYEASGSPSNYLWNTSVFMEIEKKIGNLLNFSVGVRFENYQINDTI
                     RDNKPILRIGTSLKLGQETYLRASVGQGYRFPTITERYIKTTVGSFGVFDNPDLIPET
                     SWNSEIGVKQGFKFAKYYGYLDIALFYQEYNNTIEYLFGFWDSTYSFAIAGFKFVNTG
                     RSKVTGIDISLTGQLKISDDFTFNTLFGYTYILPVTLQPNYVFAKDYSPGGSKDFSYE
                     TTSVNPSHHILKYRFLHTIKMDVELNCKRFSAGFSLKYFSKIENLDKAIFDFEDATVA
                     SGGTTQPILYRKYYETHNNGNVVIDNRISYELGLRHKVSLITSNLLNRMYSLRPLKAE
                     PMRNISLQYILNL"
     gene            complement(2526..>2733)
                     /locus_tag="QF480_06280"
     CDS             complement(2526..>2733)
                     /locus_tag="QF480_06280"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN06204.1"
                     /translation="QQLIFLIGDNNKQLYELRLVDINGQTVLKSQITSGENSTVNIGE
                     LPMGLYIVIANNSQKAFTRKVIIN"
BASE COUNT          893 a          488 c          437 g          915 t
ORIGIN      
        1 agaaaatact gagaataaaa aatccttaat agaatatgga ctataaattc agaatgtatt
       61 gaagtgatat gtttcgcata ggctcagctt ttagaggcct aagtgaatac atcctgttca
      121 gcaggtttga tgtaattaat gaaactttat gccttaatcc taattcatag cttatcctat
      181 tatcgataac tacattgcca ttattatggg tttcgtaata cttcctatat aatattggtt
      241 gagtagtccc accagaagca acagttgcat cttcaaagtc aaatattgct ttgtcaagat
      301 tctcaatttt actaaaatat ttgagactga acccagcgga aaatctttta caatttaact
      361 ccacgtccat tttaatagta tgtaagaaac gatatttcag tatatggtgg cttgggttaa
      421 cacttgttgt ttcgtatgag aaatctttgc ttccaccagg gctataatct ttagcaaata
      481 catagttagg ttgcaaggtt acaggtaata tatatgtata accaaacaaa gtattgaatg
      541 taaaatcgtc agaaatttta agttgtcctg taagcgatat atcaatacct gtaactttcg
      601 atcttcctgt gttaacaaat ttaaatccgg caatggcaaa tgaataagtt gaatcccaaa
      661 aaccaaacaa atattcgatt gtgttattat actcctgata aaacagcgca atgtctaaat
      721 agccataata ttttgcaaac ttgaagcctt gctttacacc aatttctgaa ttccaactgg
      781 tttcaggtat cagatcagga ttgtcaaaaa ctccaaaact accaacagtt gttttgatgt
      841 atctttcagt aattgtggga aatctataac cttgacccac agaagccctc aaatatgtct
      901 cctgccctaa tttaagcgat gttcctattc ttaatattgg cttattgtcg cgtatcgtat
      961 cattaatttg atagttttca aaccttacac ctacagagaa attcagcaaa ttgccaatct
     1021 ttttttcgat ctccataaaa acagaagtgt tccacaaata atttgagggc gaaccagaag
     1081 cctcatagag atgtgcatat gaatatgtat actgatttgt aacaccaatg ataaaatcta
     1141 atccaccaag atttttaaaa cttttgccaa attgataatt attataaaca aagagtgatt
     1201 ttgtagattg attgttgtta gcttcattat ttgaatacat aacccttgaa gtgaactcat
     1261 gcttgaaacc catgcttgag taaaaattta caaacggatc taaatagaat gtagtgtttt
     1321 ttgaaagtaa tactgcacct ggatatgctc tgtagaaatt agttgtgtca tctaaccatg
     1381 caaacacagt actagactta tggtacatta tattaccatt tagaccataa tccaatcctt
     1441 taattttttt cgaacgatgt cttaagttaa aatttaacct tacttttcgg ttagccattt
     1501 catcatcact aataggtact gtatctatta ccaaaggacc aggaaccggt gcgcctagat
     1561 aactctcgtt tgctgagaac atcccaccaa taacaagatc agtatgcccg ttaccaagtt
     1621 gctgtgaatg tagaaaactt gctgatgctt tataattaat tcctttccac catgcaactg
     1681 ctggcgatct tggagatgaa taaaaacctg tggaaacttt tactttagta tatggttgaa
     1741 ttccggggta attggttcga atatatatag ctccacttaa cgctgatgca cccgaaagta
     1801 ctgatgaagc tcctttaaca acctcaattt gttttatgtt ttccactgga atcagagacc
     1861 aattagtttt gccggcatct ccagatgtta caggaagatt gtcgataaaa actgcaactt
     1921 tgcttccaac gccaaaagta aatccactac cacctcttat ttgaggttct tcatccaaaa
     1981 ttgttaatcc tggaatcatg tcaagaattg tttccacaga ttcggtattc cttgcatcaa
     2041 taagcctagg tgtcattatt tctatagaaa ctgtttgggt ttcaatactt ttgtcgaatt
     2101 tcccagcccg aacaataatc tcatcaaaat tagtgctgaa tggaaccatc tcaaaattaa
     2161 tatgaatagt actatctgaa gtaatgttga tttgtacggt ttgagatttc atgccggtat
     2221 atgaaattat gaaaatatga ttaccaattg gtagtgaaag tgaaaaataa ccgttaaaat
     2281 cactaacagt tcccaccgac atgtcttttt taagatagat gtttgctcca atgagcgatt
     2341 cggaagttat ttgatctaat actctccccg agaaaatccc attattttga ccaagtacgc
     2401 tacataaagg agaaatacaa aacaagaaca acaaaaaatt gaacaaggtg gttttgccgt
     2461 atattcttgt tttcatgcag atcaacaaaa gttgtttatg ttttggttag tagagatgat
     2521 tagcatcaat tgattattac ttttcttgta aatgcttttt gcgaattatt ggcaattact
     2581 atatataaac ccataggtag ttccccaata ttaactgtgc tgttttcacc agatgtaatt
     2641 tgacttttta gcacggtttg tccattaata tcaactaatc ttaactcata taactgcttg
     2701 ttgttatctc caataaggaa aattaattgt tgg
//
LOCUS       DASCQP010000368         2608 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001358681, whole genome shotgun sequence.
ACCESSION   DASCQP010000368 DASCQP010000000
VERSION     DASCQP010000368.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2608)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2608)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2608
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001358681"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(22..>2608)
                     /gene="porU"
                     /locus_tag="QF480_06285"
     CDS             complement(22..>2608)
                     /gene="porU"
                     /locus_tag="QF480_06285"
                     /inference="COORDINATES: protein motif:HMM:NF033707.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008234 - cysteine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="type IX secretion system sortase PorU"
                     /protein_id="HJN06205.1"
                     /translation="FTPSNDQLIVKTVFDRTEGTSVGYLDFIEVNVERDLKFTGDQMM
                     FRKIIPEGKNIASYKLLNAGENITVWDISTPINPQEVITQVEGNGIAFKADASSFHDY
                     IAFNNNNYQAVEFVDQVPNQNLHSHRNIDYLIVTHPDFIAEAETLAEFHRSHGTLVVL
                     VVTIDQVYNEFSSGGQDITAIRDFAKMLYDDSDPGRELKYLLLFGDASYDYKDILPDN
                     TNFVPCWESIKSLDIVSSIASDDYFGFLDDGEGQEFSNDLVDIGIGRFVVATVEEAQT
                     AIDKTIHYSVNTTQVMAPWRNVVTFVADDGDGNRHLKDAEILANIFDTAFQVYNIDKI
                     YTDAYEQISTPSGQRAPAVNQAINRRIEKGTLIVNYSGHGGEIGLGHERVVQIPDIIS
                     WENYDKLSVFITATCEFTRYDDPTRVSAGELVFLNDKGGAISLLTTSRATYAGSNLAL
                     NIAIFNNNLFSKIDGEYPRFGDVIRKSKLFGTANDKKFLLVGDPACKMAYPEHRAETV
                     KINSQIVFPTEPDTVRALQLVKVEGIITDVDGTKLTDLEGELFSSVFDKKTEILTYGD
                     ENSSYTFYIRNRVIFNGKSTINNGDFEFDFMVPKDIAYKYGDGKISYYFRDSEKTDGN
                     GYYENIVVGGFDENAAPDTEGPIIELFMNDTTFLPGDFTNQNPLLLAFVSDKSGINTT
                     GNGIGHDIVTVINEDKELTFVLNDYYEADQNKYNKGKIAYPFSELPDGEHNLSFKVWD
                     VYNNSSTAYLNFLVVSSEQLVVENLMNYPNPFLSETNFVFDHNQQGNNIDIQIEIFSL
                     SGQLVKTINAKLHPEGFRSEPIVWDGRTDGGGNIGNGFYVYRVTVRNEGGATGTDQSK
                     LVYIR"
BASE COUNT          848 a          542 c          382 g          836 t
ORIGIN      
        1 actgcaattt cttttagaac ctcaacgtat gtaaactaat tttgactgat ctgtaccggt
       61 agcaccacct tcatttctaa cagttacgcg gtaaacataa aaaccatttc caatgtttcc
      121 accaccatca gtccgtccat cccaaacaat tggttctgat ctaaaccctt caggatgaag
      181 ttttgcatta atggttttaa ccaattgacc gctaaggcta aaaatctcta tttgaatatc
      241 aatattatta ccctgttggt tatgatcaaa aacaaaattt gtttcagata ggaaagggtt
      301 gggataattc ataagatttt caacaaccaa ctgctccgaa gaaaccacca gaaaatttag
      361 atatgcagtg gatgaattat tataaacatc ccacacttta aaactcaggt tatgctcacc
      421 atcaggtagt tcgctaaaag gataagctat ttttccttta ttatacttat tttgatcggc
      481 ttcgtaataa tcattcaaca caaatgttaa ctctttatct tcattaataa ctgtaacaat
      541 atcgtgtcca attccattac ctgtagtatt aataccactc ttatcactaa caaatgccaa
      601 caaaagtgga ttttggttag taaaatctcc cggcaagaat gtagtgtcgt tcataaacag
      661 ttcaataata gggccttcgg tgtcgggcgc agcattctca tcaaaaccgc caacaacaat
      721 attttcataa tatccattac catcagtttt ttcagaatcc ctaaaataat agcttatttt
      781 gccatctcca tacttatatg ctatatcttt cggtaccata aaatcaaact caaaatcacc
      841 attattgatt gttgattttc cattaaatat aaccctattc ctaatataga atgtatagga
      901 tgaattttca tcaccgtagg taagtatttc tgttttctta tcaaacacag aggaaaataa
      961 ctcaccttca agatcagtta atttagtgcc atctacatca gtaataattc cctcaacttt
     1021 aaccagttgt aatgcacgaa cggtgtcagg ttcagttgga aatactatct gagaatttat
     1081 tttcacagtt tcagccctgt gctcaggata agccatttta caagcggggt ctccaacaag
     1141 cagaaatttt ttatcatttg ctgttccaaa taacttcgac ttacgaataa cgtcgccaaa
     1201 tcgagggtat tctccatcaa tcttgctaaa tagattatta ttgaaaatcg caatattgag
     1261 tgccagatta gagcctgcat acgtagcccg agacgtagtg agaagtgaaa ttgctccacc
     1321 tttatcattt aaaaatacca attctccagc tgataccctt gtggggtcat catacctagt
     1381 aaattcacat gtggctgtta taaatacaga gagtttatca taattttccc atgaaataat
     1441 gtccggtatc tgaacaactc gctcatgacc aagtccaatc tcaccaccat ggcctgaata
     1501 attaacaatc aatgtacctt tttcaatcct acgatttata gcctgattta ctgctggtgc
     1561 tctctgccca cttggtgtag agatttgttc ataagcatca gtatatattt tatcaatatt
     1621 atacacttga aatgcagtat caaatatatt agccaatatt tcagcatcct ttaaatgacg
     1681 gttaccatca ccatcatcgg ctacaaacgt gacaacgttc ctccaaggtg ccataacttg
     1741 agttgtattt acagaatagt gaattgtttt atcaattgcg gtttgagcct cctcaacagt
     1801 tgctactaca aaccgtccaa ttcctatatc aacaagatca tttgaaaact cctgaccttc
     1861 cccatcatct aaaaatccaa aataatcatc acttgcaatt gaactaacta tatcaaggga
     1921 cttaatggat tcccagcatg ggacaaaatt tgtgttatcg ggtaatatat ccttataatc
     1981 atatgaggca tctccaaaaa gcaataaata cttaagctct cttcccgggt cgctatcatc
     2041 gtaaagcatt tttgcgaaat cgcgaattgc agttatatcc tgacctcccg atgagaactc
     2101 attataaacc tgatcaatcg taaccactaa tacaaccaag gttccgtgtg atctatgaaa
     2161 ttcagcaaga gtctcagctt cagcaataaa gtcagggtgt gtaacgatta aataatcaat
     2221 attgcgatga ctatgtaaat tttggttcgg tacctgatct acaaactcca ctgcctgata
     2281 attgttgtta ttaaatgcta tataatcatg aaacgaagat gcatctgctt taaaggctat
     2341 accattacct tcaacttgag taattacttc ttgaggatta ataggtgttg aaatatccca
     2401 aacagtaata ttttctcctg catttaatag tttgtaacta gcaatattct ttccttcggg
     2461 gattatttta cgaaacatca tctgatctcc ggtaaatttt aaatcccgct caacatttac
     2521 ttcaataaaa tcaagataac caacagatgt accttcagta cgatcgaaaa ctgttttaac
     2581 aattaattga tcatttgatg gagtaaat
//
LOCUS       DASCQP010000369         1772 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001361184, whole genome shotgun sequence.
ACCESSION   DASCQP010000369 DASCQP010000000
VERSION     DASCQP010000369.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1772)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1772)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1772
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001361184"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            385..774
                     /locus_tag="QF480_06290"
     CDS             385..774
                     /locus_tag="QF480_06290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06206.1"
                     /translation="MNYLILTAGVIAALATIGHTTMGSKKFLRPVMKSDLDLTVKKVM
                     QSLFHYMSVFMVLTTFFLIAISTGGCQQFENTPDVVKLIGFIYAGFAIVQFIIAATSK
                     IKMGIFKLFQWIFWALIAFFTLFSVYG"
     gene            1419..>1772
                     /locus_tag="QF480_06295"
     CDS             1419..>1772
                     /locus_tag="QF480_06295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06207.1"
                     /translation="MNSLFTLFKSNLSYLVLFHRKFVSLLYLIIFGFLFLPTGVMAEG
                     SKEIYIGTNTTGLYFCNNFITQCDNNGNRTQFAIYDCDSLDRLNFVVNSNDEVVYMGF
                     NGDDGFNWHLVYRIKD"
BASE COUNT          603 a          250 c          287 g          632 t
ORIGIN      
        1 gtcacataat gatattatga atggaggaga aattattttt gaaatgagtg atactccaaa
       61 aaaatagttt gtcttatttg aagaggaaat atcaattgaa taataatgtt acttttatgg
      121 gcttgcaata atgcaataat tagaatttgg ctacacttgt tatagttgag tattgcaaac
      181 tctctctttt gtcatcctcg agcgcagcga agcctgcctg ccggtcaggc agggatctct
      241 aatttgcaaa taacaacatt atgagattct tctccgccag tggcgaatca gaatgacaag
      301 atgtttacct cttgacttgc tgcttagttt atccaagaga aaaaatataa attgtaacac
      361 aatatttaaa ctaactttaa aaacatgaat tatcttattt taacagcagg agtaatagca
      421 gctcttgcaa caatcggaca tactacaatg gggtctaaga aatttttaag gccggtaatg
      481 aagtcagacc tggatttgac tgtaaaaaaa gttatgcaaa gcttatttca ttacatgtca
      541 gtatttatgg ttctaaccac atttttctta atcgccattt ctaccggagg atgtcagcaa
      601 tttgaaaata cccctgatgt tgtaaaactc attggtttca tttatgccgg ttttgcaatt
      661 gtacagttta taattgcagc gacttccaaa ataaagatgg gaatttttaa attgtttcaa
      721 tggattttct gggcattgat agctttcttt acgctattta gtgtttacgg ttaaccgttt
      781 tattatcaaa aattaattta ggttcgaaac taattattga aataacatat ctgtttttga
      841 accttttact cccactcacg tataatgtgt ttatatagaa ataattattt ctggatttta
      901 tgcaatatgc tactgagttt tttaattaga ttgaatacaa attactaaac ttgaaaataa
      961 tctttattgc tgaacaaatt agaaatacta catttacacg aaatttgaat atctttgtaa
     1021 ctgtcattat taatgaaaaa gcacatatgt aaaattctac tgaaatagaa tctgacatcg
     1081 taatttcgtt ataaaaattt ttatcaaacc aaaaccacct tgatgaaaat aatcacaaag
     1141 caacttatta cgttaattat ggtcttagtt aaaaatgact ataacaagta ggttctagcg
     1201 tgccttataa ttaatagata atttgacttt tattacagaa ttaggaataa aaaaataaac
     1261 catgaaatga gcataaactt ttttaagcct gtctgccgaa caggcaggca tacaataccg
     1321 aaagtgatta aaacaagttt atgcgaaagc gcagcggttg cagatgtgta caaattttta
     1381 attaatttat attcaggtaa ttaataaatt ttaaacagat gaatagtctc tttactctct
     1441 ttaaatcaaa cttatcatat ttagtcttat ttcatagaaa gtttgttagt ctcctgtatt
     1501 tgataatatt tggcttcctt tttttaccaa ctggtgttat ggcagagggg tcgaaagaga
     1561 tttacatagg tactaatact accgggctat atttctgtaa taattttata actcaatgtg
     1621 ataataatgg taatcgaaca caatttgcta tatatgattg tgatagttta gatcgtttaa
     1681 actttgttgt gaactcaaat gatgaagttg tttatatggg ttttaatggt gatgatgggt
     1741 tcaattggca tcttgtttat cgtataaaag at
//
LOCUS       DASCQP010000370         3600 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001370124, whole genome shotgun sequence.
ACCESSION   DASCQP010000370 DASCQP010000000
VERSION     DASCQP010000370.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3600)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3600)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3600
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001370124"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..314
                     /locus_tag="QF480_06300"
     CDS             <1..314
                     /locus_tag="QF480_06300"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN06208.1"
                     /translation="SYDVHVDDLVLENVFVVDVIDAIADNYLADAVSIYPNPASDNVV
                     VSAPIGSQVVITDIGGRRLSEFKVSGKTIDIDVSSYNSGLYLVQITHNGVAFSGKLIK
                     N"
     gene            579..932
                     /locus_tag="QF480_06305"
     CDS             579..932
                     /locus_tag="QF480_06305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06209.1"
                     /translation="MDNYCLECGTLLLGRVDKKFCNDQCRNNYHNKENREDSVLIRNV
                     NIILKKNRNILKNLNPVGKIKIKKQALVSEGFNFKYFTNLYKTKDNRIYYFVYEHGYI
                     DLGNDYFALVINMDI"
     gene            1010..2434
                     /locus_tag="QF480_06310"
     CDS             1010..2434
                     /locus_tag="QF480_06310"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015049.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBOAT family O-acyltransferase"
                     /protein_id="HJN06210.1"
                     /translation="MVFSTSLFLTIFLPIFLIIYNVVGKKLKNWVILLASIIFYAWGA
                     PKFVFILIGSTIIDFYLVRMMYNSKAISRKRALLIVSITLNLGLLAYFKYANFFIENV
                     NSFLHLMGINPISWFNVLLPIGISFYTFQTLTYSIDIYRNVHKPLDRVNDYLLYIMSF
                     PQMIAGPIVRFNTIADQIVERNETIDDKLTGFIRFSIGLAKKVLIANVMGEQADLIMN
                     SDISNISTAMAWTGIMAYTFQIYFDFSGYSDMAIGMGRMMGFKFPENFNNPYVSRSIT
                     EFWRRWHITLGAWMRDYLYIPLGGSKVSTKRRLYFNLWFVFLVSGLWHGASWSFVVWG
                     AYHGFFLVAERLFLLKFYKRIGKLPSVIITFLIVIIGWVFFRIEQFDLAIIYLKKMFV
                     LQFSDADFSTIPSFVFFILVAAVFSFITLFKSGLKLDRFFFNNDNYRNASYYWMIPIG
                     IILFAISLSSITSSGFNPFIYFRF"
     gene            2436..>3600
                     /locus_tag="QF480_06315"
     CDS             2436..>3600
                     /locus_tag="QF480_06315"
                     /inference="COORDINATES: protein motif:HMM:NF028132.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06211.1"
                     /translation="MSSNYNILIKKALYVIIVFLLILPLIQQNTAVVYVKPLKGSVKK
                     VKDPKFTFKSWFSGDYQSQKEKFINNTFGFRTSFVRLHNQLDYSLFGKINAKSVILGK
                     DEYLYELSYIYEYLGRNFLGRDVIKQKVAKLKSVSDSLSARGIDLIVLFAAGKASYYP
                     EYFPDSLQEKSKTISNFDYFTHAIDSAGILNIDFNTWFVEMKDTISYPLFTKGGIHWN
                     KYGEYLVVDSLISYVEKLRGVKLPQVVVDKIEITSIPRYRDNDIAEGMNLIFPHSNAP
                     MAYPEISIDKSQPFDTVNAMVVADSYYWELYNEGLSRDVFNNGQFWYYNRKIYSQKPG
                     WATLPVNETDIMAEVEKSDIVFIFQTEATLYRFGFGFVEKEVELYAQKDYNPNV"
BASE COUNT         1164 a          490 c          668 g         1278 t
ORIGIN      
        1 gtagctacga tgtgcatgtt gatgatctcg tgttagagaa tgtctttgta gttgatgtga
       61 tagatgcaat agcagataac tatctggctg atgctgtttc tatttatcca aatcctgcct
      121 cagacaatgt tgttgttagt gcaccaattg gctcgcaagt tgttataact gacataggag
      181 gtcgtagatt aagtgaattt aaagtttcag gcaaaacaat agatattgat gtttcctcat
      241 ataatagtgg attatattta gtacaaataa ctcataatgg tgttgccttt tcggggaaac
      301 taattaaaaa ttaggcaacc ttttattatt taaattttca tagttaatac ctgtaattat
      361 ttggaaacct tcctggcctc tcaggccttg gaaggttttt tattatcaaa gattaaataa
      421 tatattattc tgagaaactc taatcaggat ctgtaataac ttgtaatttt aggctgatac
      481 gtgaaaacag gtgatgttat tgacagtgat tagttaagaa ttgcaaattt ttcatactat
      541 tagccatagt tttttaactt tggaaaaaaa tacccaaaat ggataattat tgccttgaat
      601 gtggaactct tctattggga agggtggata aaaagttttg taacgatcag tgcagaaaca
      661 actatcacaa taaagaaaac agagaggact ccgtcctaat aagaaatgtt aacattattc
      721 ttaaaaagaa cagaaatata ttaaagaatt taaatcctgt tggaaaaatt aagataaaaa
      781 agcaagcgtt agtttccgaa ggttttaatt tcaagtattt taccaacttg tataaaacaa
      841 aagataaccg tatttattat tttgtatacg agcacggata tattgatctt ggtaacgatt
      901 attttgcttt agtaataaat atggatatat aatgatgcct gtcatacatg gtgtgtaata
      961 aattaccaac taaaaattgt tgatatttgc aaccaaattt gcaaactaga tggtttttag
     1021 tacaagttta tttctaacga tttttcttcc catcttcctc atcatataca atgttgttgg
     1081 aaaaaaactt aaaaactggg taatattact agcaagtatt attttctacg cctggggtgc
     1141 accaaaattt gtttttattc tcatcggatc aaccattatc gatttttatc tggttaggat
     1201 gatgtacaat tcaaaggcaa tcagtcgaaa acgagcttta ttaatcgttt ctattacatt
     1261 aaacctcgga ttgttagcgt attttaaata tgctaatttt tttatagaaa acgttaattc
     1321 ctttttacat ctgatgggta ttaatccaat tagctggttt aatgtactgc ttcctatagg
     1381 tatatcattt tacacatttc aaacacttac ttattcaata gatatttatc gaaacgttca
     1441 taaaccactt gatagagtaa atgattatct gctttatatt atgtcatttc cacaaatgat
     1501 tgcaggtcct attgttcggt ttaatactat tgctgatcag atagttgaaa gaaatgaaac
     1561 cattgatgat aaacttactg gctttatcag attttcaatt ggtttagcga aaaaagttct
     1621 tatagcaaat gtgatggggg agcaggccga tctgattatg aatagcgata ttagtaatat
     1681 aagtacagca atggcatgga ccgggataat ggcttatacc ttccaaattt actttgattt
     1741 ctccggctat tctgatatgg cgattggaat gggaagaatg atggggttta agtttcctga
     1801 aaacttcaat aatccttatg tctcgagaag catcactgag ttttggagac gttggcatat
     1861 aactctggga gcctggatgc gtgattattt atatatacca cttggaggca gcaaggtgag
     1921 tacaaaacga cgtttgtact ttaacctatg gtttgtgttt ttggtttcag ggttatggca
     1981 tggagcatcg tggagttttg ttgtttgggg tgcctatcat ggcttctttt tggttgctga
     2041 acgacttttt ctgttaaaat tttataagcg aattggaaaa ttaccaagtg tgatcataac
     2101 ttttttgatt gtgattattg gttgggtatt ttttagaatt gaacaatttg acctcgcaat
     2161 tatatattta aaaaaaatgt ttgtattaca gtttagtgat gctgatttca gtacaatccc
     2221 ttcttttgtg tttttcatat tagtagcagc tgtattttca tttatcacat tgtttaagtc
     2281 gggacttaag cttgatagat ttttctttaa caatgacaac tacaggaatg cttcatatta
     2341 ttggatgata cccattggaa taatattgtt tgcaatatca ctgagttcga ttacttcgtc
     2401 aggatttaat ccgtttatat attttagatt ttagaatgag cagcaactat aatatattaa
     2461 ttaaaaaagc actttatgta attattgtgt ttttattgat attgccttta attcagcaga
     2521 ataccgcagt tgtttatgtt aagcctttga aaggatcagt aaagaaagtt aaggatccta
     2581 agtttacttt taagagttgg tttagtggcg attatcaatc acaaaaagaa aaatttataa
     2641 ataatacttt cggtttccgt acatcgtttg taagactaca taatcaactc gactattcgt
     2701 tatttggtaa gataaatgct aaaagtgtta ttctgggaaa ggacgaatat ttgtacgagt
     2761 tgagctatat ctatgaatat ttgggacgaa attttcttgg gagagatgta attaaacaaa
     2821 aagttgcaaa gcttaaaagc gttagtgatt ctctatctgc cagaggtatt gacctaatag
     2881 tactatttgc agctggaaag gctagttatt atcctgagta tttccctgac agcctacagg
     2941 agaagtcgaa aacaatttct aattttgatt atttcacaca tgctatcgac tctgctggta
     3001 tattaaacat tgattttaat acttggtttg tggaaatgaa agatacaatt agttatccac
     3061 ttttcacaaa aggtggaatt cattggaata aatatggaga atatcttgtt gtcgactcat
     3121 tgattagtta tgttgaaaag ttaagaggag tgaagcttcc tcaagttgtt gttgataaaa
     3181 tagaaattac ttcaatacca agatatagag ataacgatat tgcggaaggg atgaatttga
     3241 tatttccaca ttcaaatgct ccaatggcct atcctgaaat atccatagat aaaagtcagc
     3301 ctttcgatac tgttaatgct atggtggtag ccgatagtta ttactgggaa ttgtataacg
     3361 aaggattatc gagagatgtt ttcaacaatg gtcagttttg gtactacaat cgaaaaatat
     3421 attctcaaaa accaggttgg gccacattgc cagtaaatga aacggatatt atggctgaag
     3481 tagaaaaaag tgatattgtg tttatatttc aaaccgaagc cactttgtat agatttggat
     3541 ttggttttgt agaaaaggaa gtagaactat atgcgcaaaa agattataat ccaaatgttg
//
LOCUS       DASCQP010000371         3310 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001372433, whole genome shotgun sequence.
ACCESSION   DASCQP010000371 DASCQP010000000
VERSION     DASCQP010000371.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3310)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3310)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3310
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001372433"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..334
                     /locus_tag="QF480_06320"
     CDS             <1..334
                     /locus_tag="QF480_06320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06212.1"
                     /translation="TLAKDLTNTYNLMGSAGVSAIVKNPPFPAMREAYINAPLTENEV
                     LNLTAYLRSVDENSIYQHPVDFGFTFVIFGLIVFVLLQITISILYFNRKKESVNYKIF
                     QRQTAVIN"
     gene            353..>3310
                     /locus_tag="QF480_06325"
     CDS             353..>3310
                     /locus_tag="QF480_06325"
                     /inference="COORDINATES: protein motif:HMM:TIGR01580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009325 - nitrate reductase complex
                     [Evidence IEA];
                     GO_function: GO:0008940 - nitrate reductase activity
                     [Evidence IEA];
                     GO_process: GO:0009061 - anaerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase subunit alpha"
                     /protein_id="HJN06213.1"
                     /translation="MSWIKDLISPKTRKWEELYRNRWQHDKVVRSTHGVNCTGGCSWN
                     IHVKDGIVVWETQAMDYPLLEKSLPPYEPRGCQRGISFSWYLYSPIRVKYPMIRGALV
                     DIFNEEKAKTGDSLKAWENIQNNPKTRRRYQIARGKGGFRRATWDEAKEIIAASNIYT
                     VKKYGPDRITGFSPIPAMSMLSYAAGSRFLQLMGGVNLSFYDWYCDLPNSFPEIWGEQ
                     TDVAESADWYNSKFIACMGANLGMTRTPDVHFFSESRHNGTKTVVFAPDFNMVAKYAD
                     KWIPVHAGQDGAFWMAVTHVILKEYHYEKQTPYFIDYTKKYTDSPFLVEINEEDGKLV
                     PGRMLRANTVDKYKNIEKGDWKFLNIDSETGDFICPGGSSGHRWDGKDGNWNMKFEDA
                     ETGQKYDPVLSLLENNDDVLQVEFIEYGKSNSALRGVPVKHVETKNGKVSVTTVYDLI
                     MAQYGIDRGLGGEYPTTYDDKNAAYTPAWQEILTGIGPKTVMQFAREWARTAETTHGK
                     CSIIIGAGINHWYHNNLIYRAGTMALMLTGCIGVNGGGMNHYVGQEKLAPSDSWGAIM
                     SGKDWQNGVRLQQTPIWHYINSNQWRYDGNQADYNTVPKNELSSMHSADMIVKSVKNG
                     WMPFYPQYNKSNLDIVTDAENAGAKTDDEIKNYVVNQLKNKKLEYAVTQPDEEENFPR
                     VWYVWRGNAIAGSAKGHEFFLKHYLGTHNNSIADEVADQFVKDIQFKSENPEGKMDLI
                     VNLNFRMDTSALYSDIILPAASWYEKTDLNSTDMHSFIHPLSKAIAPVWESKSDWMIF
                     REIAKETSELAKKHFSTPVRDLVNLPIAHDSAGEISQSEIKDWSKGECEPIPGKTMHN
                     MVVVDRDYTKIYDKFISLGPNVKNGLGAHGNGYQCADFYEDMLKDAGHLQEVDGVKYP
                     SLYEDEEAANAVLHLSSLTNGVLSQRAYEGAEKRTGLSLTDISEGSQDVLINYKDLQA
                     KPHRYNQSPVWSGL"
BASE COUNT         1100 a          572 c          718 g          920 t
ORIGIN      
        1 cactttagcg aaagatctaa caaatactta caatttaatg gggagtgcag gggtctctgc
       61 aatagttaaa aatcctccat ttccagccat gagggaagca tatataaacg cacctttaac
      121 ggaaaatgaa gtccttaacc ttacagcata cttacgctcc gttgatgaaa acagcatcta
      181 tcaacatccg gtagattttg gtttcacatt cgtcattttt ggcttaatag tatttgtatt
      241 acttcagata actatcagca tactttattt taatcgaaag aaggaaagtg taaactacaa
      301 aattttccaa aggcaaaccg cagtgattaa ttaagaaaaa acatttatta aaatgagttg
      361 gatcaaagat ctcatttctc ccaaaacaag aaaatgggag gaactataca gaaacaggtg
      421 gcaacacgac aaagtagtac gaagcactca tggtgttaac tgtaccggtg gatgcagctg
      481 gaatattcat gtaaaagatg gtattgtagt ttgggaaact caggctatgg attatccttt
      541 acttgagaaa tcgttaccac cttacgaacc cagaggttgc cagcgtggca tttctttttc
      601 atggtattta tacagtccaa ttcgcgttaa gtatcccatg atccgtggtg ctttggtaga
      661 tatatttaat gaggaaaagg ccaaaacagg agattcctta aaagcatggg aaaatattca
      721 aaataatcca aaaacccgta gaagatacca aatagcaaga ggaaaaggtg gttttagaag
      781 agcgacctgg gacgaagcaa aagagattat tgctgcatca aatatttata cggttaagaa
      841 atatggacca gatcgcatta ccggtttctc tccaataccc gccatgtcta tgctaagtta
      901 tgccgcaggt tctcgtttcc ttcaattaat gggtggtgtt aaccttagtt tctatgattg
      961 gtattgtgac ttacctaatt cgttccctga aatttgggga gaacaaacgg acgttgcaga
     1021 aagtgccgac tggtacaatt cgaaatttat tgcctgcatg ggtgcaaacc taggcatgac
     1081 gcgtacccca gatgttcatt tcttttcgga gtcgcgacat aacggtacta aaacagttgt
     1141 ctttgccccc gactttaaca tggtagcaaa gtatgctgat aagtggatac ctgttcatgc
     1201 aggacaggat ggcgcttttt ggatggctgt tacacacgtt atacttaagg agtatcatta
     1261 tgaaaaacaa actccttatt ttattgatta tactaagaaa tacactgaca gcccatttct
     1321 tgttgaaata aacgaagaag atggcaaact ggtacccggt aggatgctta gagctaatac
     1381 agttgataaa tataagaata ttgaaaaagg agattggaaa ttcttaaata tagactccga
     1441 aactggtgac tttatctgtc cgggtggaag ttccggacac cgttgggatg gaaaagatgg
     1501 taattggaac atgaaatttg aagatgccga aacaggtcag aaatatgatc cagtactatc
     1561 actgcttgaa aataatgatg atgtactaca ggtagaattt attgagtatg gaaaaagtaa
     1621 ttctgcgcta agaggtgtgc ctgtaaagca tgttgaaact aaaaatggta aagtatctgt
     1681 tactactgtt tacgacctta ttatggctca atatggtata gatcgtggac tcggcggaga
     1741 atacccaaca acatatgatg ataaaaatgc agcttatacg ccagcgtggc aagaaatttt
     1801 aacaggaata ggtcctaaaa ctgtaatgca atttgcccgt gaatgggcta gaacagcaga
     1861 gactactcat ggcaaatgca gcattataat aggtgctggt atcaaccact ggtatcataa
     1921 taatcttatt tatcgtgctg gaacgatggc cctgatgtta acaggatgta ttggcgttaa
     1981 tggtggtggg atgaaccatt atgttggtca ggaaaagctt gcaccgtctg attcctgggg
     2041 agcaatcatg tcaggaaaag actggcaaaa cggggttcgt ttgcagcaaa ctccaatatg
     2101 gcattatatt aattcaaatc agtggcgtta tgatggtaat caggccgact ataatactgt
     2161 tcccaagaat gagctttctt caatgcactc tgcagatatg attgttaaat cagtaaaaaa
     2221 tggctggatg cctttttatc ctcagtataa taaaagcaat ttagatattg ttacagatgc
     2281 ggaaaatgca ggagcaaaaa cggatgatga aattaaaaat tacgtagtta atcagctaaa
     2341 gaataaaaag ctggaatatg ctgttactca gcctgatgaa gaagaaaact ttcctcgtgt
     2401 ttggtacgtt tggaggggta atgctattgc tggaagtgct aagggccacg agtttttctt
     2461 gaagcattat ctaggtacac ataacaactc cattgctgat gaggtagccg atcaatttgt
     2521 aaaagacatt caattcaaaa gtgaaaatcc agaaggaaaa atggacttga ttgtcaatct
     2581 caattttagg atggatactt ctgctttgta ttctgatatt attttaccgg cagcatcctg
     2641 gtacgagaaa acagacctta acagtactga catgcactca tttatacacc ctctttcaaa
     2701 agccattgca cctgtatggg aatcaaaaag tgattggatg atcttccgtg agatagcaaa
     2761 agaaacaagt gaattagcta agaaacattt ttcgactcct gttagggatt tagtgaactt
     2821 accgattgca catgatagtg ctggtgaaat atcacaaagc gaaattaaag attggagtaa
     2881 aggcgaatgt gaacctattc ctggcaaaac aatgcataat atggtggttg tcgatcgtga
     2941 ctacactaaa atttatgata agttcatcag ccttggacca aacgttaaaa atggacttgg
     3001 tgcacacggt aatggatacc aatgtgcaga tttttatgaa gacatgctta aggatgctgg
     3061 tcacttacaa gaagtagatg gagtaaaata tccttcatta tatgaagatg aagaggcagc
     3121 aaatgcagtt cttcacctgt caagccttac aaatggggta ctcagccaac gggcatatga
     3181 aggagctgag aaaagaaccg gcttgtcatt gacagatatt agtgaaggga gtcaggatgt
     3241 gcttataaac tacaaagacc tgcaggcaaa accacacaga tataaccaat cacccgtatg
     3301 gtccgggtta
//
LOCUS       DASCQP010000372         5663 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001376745, whole genome shotgun sequence.
ACCESSION   DASCQP010000372 DASCQP010000000
VERSION     DASCQP010000372.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 5663)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5663)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5663
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001376745"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            109..2703
                     /locus_tag="QF480_06330"
     CDS             109..2703
                     /locus_tag="QF480_06330"
                     /inference="COORDINATES: protein motif:HMM:NF013125.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lamin tail domain-containing protein"
                     /protein_id="HJN06214.1"
                     /translation="MKQISILLLVLLSNILLSQTSDDFEDGNFTENPEWTGNLQLFKV
                     NSAFQLQLNDSIENKVYLGTTNTMINNTEWRCWIKLGFSPSGNNNARYYLVSNKQDLS
                     DSLAGYFLQFGESGSNDAIELFRQDGTELFSVCRSIDGIISSSFEIRVKVTRDGVGLW
                     KLFVDQSGGEDFTFEAEGIDNTFTQTSQLGFLCRYTKSNSNKMYFDDVYAGPFIVDNE
                     PPVLLGITVDTDSTVTLQFNESLNEGSVALINNYEVDNGIGNPTSAFRDDNDASIIRL
                     SFNSKFKLGKNYLMAVSGVKDLVENIMIPQQMNFVYYQPQPMDVVINEIMADPNPSVG
                     LPDYEYLELYNQTETNIDLDNWTLIIGTSEKTFSSININAGSYLIIAKEAAYDELSTY
                     GDFYGFSSFSLTNAGQTIQLKSNNGETISSVTYASNWYNDPVKEEGGWSLEQKYAANI
                     CSGKENWTASINNKGGTPATINSVANNTLLLPQLSKLEVLTDNIIQLYFNQSMDEESL
                     SNNDLYNVDNNIGSPEYVYTYYDEPEKVELYFENRFIPGVTYELTISNNLMNCMLLNL
                     SADTLVYFGLPDIVTTNDIVINEILFNPWTNGKDYVELYNPSSKIIDLSTLSIGSIKE
                     NPPNPPDTSIYNIVSSQSLFMPDEYMVLTMSPEAVMKQYTIKDPNAFLKVDPFPSYNN
                     DEGHVFLISNDDIIIDSLSYSEDMQFPLLVYFEGVALERIVPNMSINGINNWHSAAEN
                     AGFGTPGYKNSQHVSNNKKVDEIIIEPEIFSPNNDGFEDIISILYEFDKPGYVMSATI
                     FNAEGYSIKKLTNNEYLGSEGSISWDGIQDDNSKAPVGIYVFFITIYDAEGKVKNYKK
                     TGVLATKL"
     gene            2741..4546
                     /locus_tag="QF480_06335"
     CDS             2741..4546
                     /locus_tag="QF480_06335"
                     /inference="COORDINATES: protein motif:HMM:NF012700.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06215.1"
                     /translation="MTNIKNNPKVYFEQQRLKFTKSLHDVKHKIKRISLLRIIVFLIT
                     TIGIYLSVANGHDILAIAFTLGIGLFIYLVKIHAGLEKDRLWNETLVTINKNELRILD
                     GDTIDMDAGSEFLHPSHPYNEDLDVFGDRSLFQLINRTATTTGRSTLAHKLNNLITNI
                     NSLVDRQLAISCLRDKADWRQNFLAIGKIFEEKKDDLSGLLTWSQTSDVRFNTMFYRI
                     MLIVNPIIGFGVLTLIELEIFTISTFLIFLLLPVALVGTKLGLLNKIHAQLSKKSGLL
                     SKYAKLFRLIAFEEFNSKLLLKIKENISGEHSAHRAIKSLAKISKSMDYRLNMLVGVF
                     LNVFFLWDIRQAIKIEKWKNRYTTYMENWFDQLSTMDELNSFAGFAFNFPNSTFPEFS
                     TKDFKIRATNVTHPLISQKECIGNDITIDGWKQFQIITGANMAGKSTYLRTVGVNMVL
                     ALTGSPVLADSFIMKPVGIFTGIKTTDSIQNGESYFFAELKKLKELINKLEDGQQLFV
                     ILDEVLKGTNSADKQKGSMALITQLIKLSSSGMIATHDLALGSLANNFPDNVTNKRFE
                     VEIANKELVFDYKLKNGISQNLNATFLMKKMGITI"
     gene            4712..5638
                     /locus_tag="QF480_06340"
     CDS             4712..5638
                     /locus_tag="QF480_06340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06216.1"
                     /translation="MEQQKNNSVQRAQGSSNIWMYIVIVIMALGIIGVSLWLLSVKST
                     MNELLAEKEVQKAELYQELQVLMSEHEETKAAYGDLTDSLQVMDSVIQANAVEIKKML
                     NYKWEYYKIKKKMSRLQVIAQGYVRQMDSIVTINQDLTEENLQIKEEIKIERRKYQKL
                     EEETETLTGKVEEASVLTAYNLKATAIHKKGGGKEVATDKIRRADLIKVCLTLGENSI
                     IKPGKKTIYVRIAEPDKKILVQGRGDSYSFTINNEVLQYSIMKEVNYDNNSVDLCVRW
                     TKRSTQELQPGLYHVDIFESGNNIGHTTFTLK"
BASE COUNT         1991 a          852 c         1008 g         1812 t
ORIGIN      
        1 tttattaaat gttttaaact ctattttata ttttattaag attataatta aaacaatttc
       61 gtaattttac aaaattatta accctctcca acctgcaaaa gtactaaaat gaagcaaata
      121 agtatactat tattggtact cctatccaat atactattat cacaaacatc tgatgatttt
      181 gaagatggta attttactga aaaccctgaa tggacgggaa acttgcaatt gtttaaagtt
      241 aattcagctt tccaacttca gttaaacgac agcatagaaa ataaggttta tctcggcaca
      301 acaaatacaa tgataaacaa tactgaatgg aggtgctgga taaaacttgg ttttagtcca
      361 tccggaaata acaatgcacg ttattatctt gtgagtaaca aacaagattt gtcagattcg
      421 ctggctggat attttttaca atttggagaa tcagggagta acgatgctat tgagttgttc
      481 aggcaagatg gaactgagct cttctccgtt tgtcgtagta tagacggaat tatttctagt
      541 tcattcgaaa ttcgagtaaa agttacaaga gacggcgttg gactttggaa actgtttgtt
      601 gaccaatctg gaggtgaaga tttcactttt gaagctgagg gaattgataa cacatttacc
      661 caaacatctc agctagggtt cctgtgtaga tatacaaaaa gtaatagcaa taaaatgtac
      721 tttgatgatg tttatgcagg gccatttatt gtagataatg aaccgcctgt acttttagga
      781 attacagttg ataccgatag cacagtaaca cttcaattta acgaatcatt aaatgaagga
      841 agcgtggctt taattaataa ttatgaagtt gataatggga taggcaatcc gactagtgct
      901 tttcgtgacg acaatgatgc ttctataatc aggttatctt tcaattctaa gtttaagttg
      961 ggtaaaaatt acttgatggc cgtttcggga gttaaagatc tggtagaaaa tattatgatt
     1021 ccacagcaaa tgaattttgt ttactaccaa ccgcaaccta tggatgtggt tattaatgag
     1081 attatggctg atcccaatcc atctgttgga cttccagatt atgaatattt agaattgtat
     1141 aatcaaaccg aaacaaatat tgatcttgat aactggacat taataatagg aacatcagaa
     1201 aaaactttta gttcgattaa tataaatgca ggtagttatt taatcattgc caaagaagcg
     1261 gcctacgatg agttgagtac atatggtgat ttttatggat ttagcagttt ttccttaaca
     1321 aatgcgggtc aaactattca gcttaaaagc aacaatgggg aaacaatttc tagtgtcact
     1381 tatgcctcta attggtataa cgatccagtt aaagaagagg gtggctggtc acttgaacag
     1441 aagtacgctg ctaatatttg ctctggaaaa gaaaactgga cagcatctat caacaataaa
     1501 ggtggcactc ctgccactat taactctgta gcaaacaata ccttactatt gcctcaatta
     1561 agcaagcttg aagtattaac cgataacata atacaacttt attttaacca aagtatggat
     1621 gaagaatcat taagtaataa tgacttgtat aacgtggata acaacattgg ttctccggaa
     1681 tatgtttata cctactatga tgaacccgaa aaagttgagc tctatttcga aaacagattt
     1741 atacctggtg taacttacga gcttacaatt agcaataatt taatgaattg tatgctttta
     1801 aatttatcgg ctgacacttt ggtatatttt gggttgcctg atatcgtaac aacaaatgat
     1861 attgttatta atgaaatact atttaatccc tggacgaatg gtaaggacta tgttgaactt
     1921 tacaatccgt cttctaaaat tattgatcta tcaactttaa gtataggttc aattaaagaa
     1981 aatcctccaa atccacccga tacttctata tataatattg ttagctcaca atctttattt
     2041 atgcctgatg aatatatggt tctaacaatg tcgcccgaag cagttatgaa acaatataca
     2101 attaaagatc ctaatgcttt tttaaaggta gatccttttc cttcttataa taacgatgaa
     2161 ggtcatgtat ttctcatttc caatgatgat attataattg attcacttag ttactctgaa
     2221 gatatgcaat ttccgctttt agtttatttt gaaggtgtgg ctttggaacg catagttccc
     2281 aatatgtcaa ttaatggcat caacaattgg cattctgcag ctgaaaatgc tggatttggg
     2341 actccgggat ataaaaattc tcaacatgtt tcgaataata aaaaagttga tgaaataata
     2401 atagaacctg aaatattttc accaaataac gacggttttg aagatataat aagtatacta
     2461 tatgagtttg ataaacccgg ttatgttatg tcggcaacta tatttaacgc tgaaggttac
     2521 tctattaaaa aacttacaaa caacgaatat cttggttctg aaggaagcat ttcctgggat
     2581 ggaatacagg atgataattc taaagccccg gttgggattt atgttttttt tataacaatt
     2641 tatgatgctg agggaaaagt taaaaattac aaaaaaacag gtgtcctagc tactaaactt
     2701 taatctttat ttgttatttt gtcatcataa aaaatactga atgacaaata ttaaaaataa
     2761 tcctaaagtt tactttgaac agcaacgatt aaagtttaca aaatctttgc atgatgtaaa
     2821 acacaaaatc aaaagaattt ctttactacg cataattgtt tttttgatta ccacaattgg
     2881 catttatctt tcggttgcta atggacatga tatacttgca attgcgttta ctttaggaat
     2941 cggtcttttt atttacttgg tgaaaataca tgccggttta gagaaagaca gactttggaa
     3001 tgaaactctg gttacaataa ataagaatga gttaagaata ctagatggag acactatcga
     3061 tatggatgct ggttcagaat ttttacatcc atcacaccca tacaacgaag accttgatgt
     3121 ttttggtgat aggtcattat ttcaattaat taatcgtaca gctacaacaa ccggaagaag
     3181 tactttggct cataagctta ataatttgat caccaacatt aacagtcttg tagatcgtca
     3241 acttgctatt tcctgcttac gcgataaagc tgattggagg caaaattttc ttgcaattgg
     3301 caagatcttt gaggagaaaa aggatgacct ttccggatta ttaacctggt cacaaacttc
     3361 tgatgtcaga ttcaatacaa tgttttatcg cataatgcta attgttaatc ctataattgg
     3421 ttttggtgtg ttaacactta ttgagttgga aatattcaca ataagtacat ttttaatttt
     3481 cttgctatta cctgttgcct tggttggcac gaaactaggc ctgttaaata aaatccatgc
     3541 tcagttaagt aagaaatcag ggctattatc aaaatacgcc aaactattta ggttaattgc
     3601 tttcgaagaa tttaattcga aattattact taagattaaa gaaaatatta gcggtgaaca
     3661 ttctgcacat cgagctataa aaagtctcgc aaaaatttca aagtcgatgg attacaggct
     3721 taatatgctt gttggagtgt ttttaaatgt tttcttttta tgggatatta ggcaggcaat
     3781 caaaatcgaa aagtggaaaa atcgctatac aacctatatg gaaaattggt ttgatcaact
     3841 ttctacaatg gatgaattaa actcttttgc cgggtttgcc tttaactttc caaattctac
     3901 gtttccagaa tttagcacga aagattttaa gattagagca actaatgtta ctcatccact
     3961 tatctctcaa aaagagtgta taggaaatga tattaccata gatggttgga aacaattcca
     4021 gattattaca ggagcaaata tggcaggaaa gagcacatat ttacgtacag ttggagtaaa
     4081 tatggtattg gcattaactg gttctcctgt gcttgcagat agttttatca tgaaacctgt
     4141 aggtatattt acaggaataa aaacaactga ttcaatacaa aacggtgaat cttatttttt
     4201 tgctgaacta aaaaaattga aagaactgat aaataaacta gaggatggtc aacaactttt
     4261 tgtaatatta gatgaggttc tgaaaggaac aaactcggct gataagcaaa aaggatcaat
     4321 ggctttgata acacaattga ttaaactaag ctcatctgga atgatcgcta cacacgatct
     4381 tgctcttggt agtttggcca ataattttcc tgataatgta acaaacaagc gattcgaagt
     4441 cgagattgcc aataaagaac ttgtttttga ttacaaactc aaaaatggta tttcacaaaa
     4501 tctaaacgca acatttctaa tgaaaaaaat ggggataact atttaaaatt tttgtagttt
     4561 tggttagttg aaaacttgta aatatctgaa acttaccttt ataaactata aactttcaat
     4621 tttaagaact ttcattcata ctaaatcata tttctctttc gtttgcattt taagagattg
     4681 tctgtaattt tgcaaactaa aatttgtagc tatggaacag cagaaaaata atagcgtgca
     4741 acgagctcaa ggaagctcca atatttggat gtacatcgtt atagttatta tggctctagg
     4801 tataattgga gtatcattat ggttgttatc tgttaagagc acaatgaatg agctacttgc
     4861 cgaaaaagaa gttcaaaaag cagaattgta tcaagagcta caagttttaa tgtcggaaca
     4921 tgaagagaca aaagcggctt acggtgatct cactgattca ttacaggtaa tggatagtgt
     4981 aattcaagca aatgctgttg aaataaagaa aatgctcaat tacaaatggg agtactataa
     5041 gataaagaaa aaaatgtcga gacttcaagt tattgctcaa ggctatgtca ggcaaatgga
     5101 ttcgatagtt accattaacc aggatcttac agaagaaaat ctgcagatca aggaagaaat
     5161 aaaaattgaa agacgaaaat atcaaaagct ggaggaggaa acagaaacac tcacggggaa
     5221 agttgaagaa gcttcagtat tgactgctta taatttaaaa gctacagcta ttcataaaaa
     5281 aggtggtggt aaagaagtag cgactgacaa gatcagacgt gcagatctca taaaggtctg
     5341 cttaactttg ggagaaaatt caattattaa acctggtaaa aaaactattt atgttcgaat
     5401 cgccgaacct gataaaaaaa tacttgttca aggaaggggt gattcgtatt cgtttacgat
     5461 taataatgaa gtgctccaat attcaataat gaaagaggta aactacgata acaattctgt
     5521 tgatctgtgt gttaggtgga caaaacgtag tacacaggaa ctacaaccag gactttacca
     5581 cgtggatatt tttgaaagtg gaaacaacat cggtcacaca acctttacat taaagtaatt
     5641 tagaatttat aagatttaag att
//
LOCUS       DASCQP010000373         4804 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001386883, whole genome shotgun sequence.
ACCESSION   DASCQP010000373 DASCQP010000000
VERSION     DASCQP010000373.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4804)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4804)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4804
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001386883"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1079
                     /locus_tag="QF480_06345"
     CDS             <1..1079
                     /locus_tag="QF480_06345"
                     /inference="COORDINATES: protein motif:HMM:NF012356.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HJN06217.1"
                     /translation="PEIKKVNVTTKRTPGHPYEGDINPGAKKHIYDVTKRWLSPNGDI
                     SKGIDGYRLDVADHIGLEFWRDYRKFVKSVNPDAYIIGEIWWEAWPDRLMDPTPYMQG
                     DIFDAVMFYHLYKPARYFFANTDLKLDAAQLKDSLEFLWTKLDKPMQYSMMNTAATHD
                     SPRLLTSFDNKSLYKVWAKPHEDSTYNTGLPDEETYTRVKLYLMHQFTIPGAPQIWNG
                     DEMGMWGADDPDCRKPLWWNNMDFDDEYQNNFQPGEKEYTKVTFNEEHFDFYKKIIRI
                     RRDNPVLATGDIKFIVAENNKLMYSRFDNNDEIIVLFNLESEPESFELQKGYSYLNLF
                     SNSSFKSSIILEPFSGMILKQLNK"
     gene            complement(1166..2272)
                     /locus_tag="QF480_06350"
     CDS             complement(1166..2272)
                     /locus_tag="QF480_06350"
                     /inference="COORDINATES: protein motif:HMM:NF025650.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SusE domain-containing protein"
                     /protein_id="HJN06218.1"
                     /translation="MKKINLITTLIIGLVIILGSCKKEETNPKLNVNLSVAAAITNPV
                     NGTVDTLLLADSAKLFTVSWSAATYSVSDGATLPVPTYSLQMAFADSNFANMKELYNT
                     QGLSFETIVYELNNSLILFGIPGDSTASIELRIVSGISGASYTNDTSDAIKLTVTTFK
                     SAEPPPPDDARLWVPGDYQGWSPPDAPNVWSPLNDGIYTGYVFYPEGGTYEFKFTSAP
                     DWEHTNFGFGGEGMLDTDPGAGNLSVPDFGGYVLTCDTNALTWSFKVQNWGVIGSGIL
                     DGDWSEDVDLEYDVANNLLTITIDVIEPPDASELRFKFRANDSWDVNLGQGAEGTNEL
                     SPGGPDIPMPDGPGNYTFILDMSQPMPTYEFYKN"
     gene            complement(2293..3882)
                     /locus_tag="QF480_06355"
     CDS             complement(2293..3882)
                     /locus_tag="QF480_06355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006797584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /protein_id="HJN06219.1"
                     /translation="MKRTIYIIALVTGIALIFNSCNKILDTKPIDPDEVTSATVFDNP
                     ESYTQFMAKCYAGLAVTGQEGPAGNGDVSVIDEGFSQYLRQYWYHQELTTDEAIITWD
                     DATIKDFHFQEWDASDRFIAGMYYRVFYQIALTNEFLRQTSDGKLDDRGVSQEWRDKI
                     VYYRLEARWLRALSYWHALDLFGSVPFATEEDPIGDFLPSQISKADLFIYIENELKEI
                     EGLMMAPRANEYGRADQAAAWTLLAKLYMNAEVYIGESKYSDCITYCDKVINSSYSLA
                     PSFQQLFWANNDQVVETMQEIIFPIRYSGEHTQTWGGTTFVIHAGVGGDMVPGDYGIN
                     GGWGGTRVTPELVEKYTGDDNRAMFFTDGQTLEIDIVSDFQNGYALTKFRNVSYTSTG
                     DTIQGFSLEFPDTDFPLFRLGDIYLMYAEAVVRGAGGTMATAVGYVNDLRARAEATAI
                     SESDLTLDFVLDERARELCWEGHRRTDLIRHNKFTGSEYIWSWKGHTKDGRATDAKYN
                     LFPLPTSDVNANPNLTQNPNY"
     gene            complement(3901..>4804)
                     /locus_tag="QF480_06360"
     CDS             complement(3901..>4804)
                     /locus_tag="QF480_06360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="SusC/RagA family protein"
                     /protein_id="HJN06220.1"
                     /translation="DYAFLRDRIYGSVDFYQRQTKDLLSWVPVPALSNLTDFINRNVG
                     EMENTGIEFTVNGKIISNEKMFWELGFNATYNKNEITELYDGASIPTGGISGGVGNMI
                     QEQAVGQPRNSFYVFEQVYNNEGMPIEGLYVDRNGDGDITEDDKYHYHDPNADFYFGI
                     SSNFSYQEWSFSFAGRANFGNYMYNNVQSANGWYNRMYRPEGPYLSNVPSSISNTNFL
                     TQQENSDYYVQDASFFRMDNITLSYTFNNLLQNRLNLQLSATVNNAFVITNYDGIDPE
                     VNGGIDNNVYPRTRIWMIGVNLIF"
BASE COUNT         1541 a          987 c          833 g         1443 t
ORIGIN      
        1 ttccggaaat aaaaaaagta aatgtcacaa ctaaaagaac gccaggacat ccgtatgaag
       61 gtgacataaa cccaggagca aaaaaacaca tttatgatgt taccaagcga tggctttcac
      121 caaatggaga tatctcaaaa gggattgacg gataccgact tgatgtagcc gaccatattg
      181 gattggagtt ttggcgcgac tacagaaaat ttgttaagtc tgtaaatcct gatgcgtata
      241 taattggaga aatatggtgg gaagcatggc cagatagatt aatggatcca acaccgtata
      301 tgcaagggga tatatttgat gctgttatgt tctatcatct ttacaaacct gcgaggtact
      361 tttttgcaaa tactgatctt aaactcgatg ctgcccaatt aaaagatagc ctggaatttt
      421 tatggacaaa attggataaa ccaatgcaat attctatgat gaatactgct gccactcatg
      481 actcacctcg cctactcact tcatttgata acaaaagcct ttacaaagtt tgggcaaaac
      541 cccatgaaga ttctacttac aacaccggat tgcctgatga agaaacctac acccgagtaa
      601 aactttacct catgcatcaa tttactatac caggtgctcc tcaaatttgg aacggtgatg
      661 aaatgggaat gtggggtgca gatgatcctg attgtcgtaa accactctgg tggaataaca
      721 tggattttga cgatgaatat caaaataatt ttcagcctgg agaaaaagaa tataccaaag
      781 ttacttttaa tgaagaacac tttgattttt acaaaaaaat cattcgtata cgtagagata
      841 atcccgtgtt agcaacaggt gacattaaat ttattgtagc tgagaataat aaattaatgt
      901 acagtaggtt tgataataat gatgaaataa ttgtgctgtt caatttggaa tcggaacctg
      961 agagttttga gttacaaaaa ggatacagtt acttaaattt atttagcaat tcctctttca
     1021 aaagttcaat aatacttgaa ccattctcag gcatgattct caaacaatta aacaaataaa
     1081 catctttgca acctaggcct tgattaaatg agcataaaaa aaaccgcccc ttaaagagac
     1141 ggtttctata tgacactagt taagactagt ttttataaaa ctcatatgtt ggcataggtt
     1201 gactcatatc caaaatgaaa gtgtaatttc ccgggccatc cggcattgga atatctggac
     1261 caccaggcga aagctcattg gtgccttcag caccttgacc aagatttaca tcccagctat
     1321 cattagcacg gaacttaaag cgaagttcac tagcatcagg cggctcaatt acatctatag
     1381 taattgtaag taagttatta gccacatcat attctaggtc cacatcttcg ctccaatccc
     1441 catcaagtat cccagaacca ataacacccc aattctgaac cttaaatgac catgttaaag
     1501 catttgtatc acaagtcagt acataaccgc caaaatcagg aacacttaag ttgccagctc
     1561 caggatcagt atctaacata ccttcgccac caaatccaaa gttagtatgc tcccagtcgg
     1621 gagcagaagt aaacttaaat tcataagtac ccccttcagg gtagaaaaca taacctgtat
     1681 agatcccatc atttaatggt gaccaaacat ttggtgcatc aggagggctc catccctgat
     1741 aatcgcctgg cacccacaaa cgagcatcat ctggtggtgg aggctcggct gatttaaagg
     1801 ttgtgactgt tagtttaata gcatcagaag tatcatttgt atatgatgca ccactaatac
     1861 cactaacaat ccttaactca atacttgctg ttgagtcacc aggtattcca aatagtatta
     1921 atgagttatt aagctcataa actatagttt caaatgacag accctgagta ttataaagtt
     1981 ccttcatatt agcaaagttg ctatctgcaa aagccatctg caacgaatat gtaggtacag
     2041 gtaaggttgc accgtctgac acagaatatg ttgcagcact ccaacttaca gtgaataatt
     2101 ttgcagaatc agctaagagt agagtatcta cagtaccatt tacagggttt gttatggctg
     2161 cagctacaga gaggtttacg ttcaacttcg gattagtctc ttctttcttg catgaaccaa
     2221 gaatgattac aaggccaatt attagtgtag ttattaaatt tatctttttc ataagtacat
     2281 aatttacaac tgttagtaat taggattctg agtgaggttt ggattggcat ttacatcaga
     2341 tgtcggcaat ggaaataaat tatatttagc atctgtagcg cgaccatcct ttgtatgtcc
     2401 tttccatgac cagatgtatt cactacccgt aaatttgtta tgacggataa ggtctgttcg
     2461 acggtgacct tcccagcata gttcacgtgc acgctcgtca aggacaaaat caagtgtaag
     2521 gtctgattcg ctgatagctg tagcttctgc tctagctcta aggtcattta cataaccaac
     2581 agcggttgcc atggtacctc ctgctccacg aacaactgct tcagcgtaca taaggtaaat
     2641 atctcctaga cggaacaaag gaaagtctgt atcaggaaat tcaagactaa aaccttgaat
     2701 agtatcacca gtggatgtat atgacacatt tctgaatttt gtaagagcat aaccattctg
     2761 aaaatcacta acaatgtcaa tctctagtgt ttgaccatca gtaaagaaca tagcgcggtt
     2821 atcatcgcct gtatatttct caaccaactc aggtgttaca cgggttccac cccaaccacc
     2881 attaatgcca taatcgccag gtaccatatc tccaccaaca ccggcatgaa taacaaatgt
     2941 ggttccaccc catgtttgag tatgttcacc actataacga attgggaaaa taatttcctg
     3001 cattgtttca actacctgat cattattggc ccaaaacaat tgttgaaatg aaggtgccag
     3061 tgaataacta ctgtttatta ctttatcgca atatgtaata caatcactgt atttgctttc
     3121 accgatgtaa acctcggcat tcatatatag ttttgctaat aatgtccatg ctgctgcctg
     3181 atcagcacgc ccatattcat ttgcacgtgg tgccatcatt agtccttcaa tttcttttaa
     3241 ctcattttcg atataaatga acaaatcggc ttttgagatt tgtgatggca aaaaatcgcc
     3301 aattgggtct tcctccgttg caaaaggaac actaccaaac aaatcgagtg catgccagta
     3361 actaagtgca cgtaaccaac gtgcttcaag cctgtaatat actattttat ctctccattc
     3421 ctggctcact ccacgatcgt caagttttcc atctgaagtt tgacgaagaa attcatttgt
     3481 cagtgcaatc tgataaaaaa cacgataata catacctgct ataaatctat cacttgcatc
     3541 ccattcctga aaatgaaagt ctttaattgt tgcatcatcc caagtaataa ttgcttcgtc
     3601 tgttgttagc tcctgatgat accagtactg ccgtaaatat tgactaaaac cttcatcaat
     3661 tacactaaca tcaccatttc ctgcaggacc ttcttggcct gtaactgcaa gacctgcata
     3721 acatttagcc ataaattgag tgtaagactc tgggttgtca aaaactgttg ctgaagttac
     3781 ttcatcggga tcaataggtt ttgtgtccag tatcttgtta caggaattaa agattaacgc
     3841 aattccagta accaatgcta ttatatatat agttcgtttc atgatatttt gtttttaata
     3901 ttagaatatt agattaacac caatcatcca aattcgtgta cgggggtaga cattgttatc
     3961 aattccaccg ttaacctcag gatcaatccc atcatagttc gtaattacaa acgcattgtt
     4021 caccgtggct gaaagctgaa ggtttaagcg gttctgtaac aaattattga atgtataact
     4081 taaggtaatg ttgtccattc taaaaaatga agcatcttga acataataat ctgagttttc
     4141 ctgttgtgtt aaaaaatttg tgtttgaaat acttgacggt acattactta aatatggtcc
     4201 ttcggggcgg tacattctat tataccaacc atttgctgat tgtacgttgt tatacatata
     4261 gttaccaaag tttgcacgtc cggcaaacga gaacgaccat tcctgataac tgaaattaga
     4321 agatattccg aaataaaagt ctgcatttgg gtcatgataa tggtatttgt catcttcagt
     4381 aatatcccca tcaccgtttc tatcaacata taatccttca attggcatac cctcattatt
     4441 ataaacctgc tcaaaaacat agaatgaatt acgtggctga cctacagcct gctcctgaat
     4501 catattaccc acacccccgg agattcctcc tgttggaata cttgcaccat cgtacaattc
     4561 ggtaatctca tttttattat aagtggcatt aaagccaagc tcccagaaca ttttttcgtt
     4621 agaaattatt ttgccattta ctgtaaactc aatacctgta ttttccatct cgccaacatt
     4681 acgatttata aaatcagtta agttagaaag ggctggtact ggaacccagc taagcaaatc
     4741 ttttgtttgt ctttggtaaa aatcaaccga accataaata cgatctctga gaaaagcata
     4801 atca
//
LOCUS       DASCQP010000374         3106 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001389231, whole genome shotgun sequence.
ACCESSION   DASCQP010000374 DASCQP010000000
VERSION     DASCQP010000374.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3106)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3106)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3106
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001389231"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..2320)
                     /locus_tag="QF480_06365"
     CDS             complement(<1..2320)
                     /locus_tag="QF480_06365"
                     /inference="COORDINATES: protein motif:HMM:NF013069.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HJN06221.1"
                     /translation="MSENRGNFFVHRPIVSLVIAIVILIVGFVMLVGLPVEQYPDLTP
                     SVVQVRGMYVGANAITVEESVATPLEQQINGVDNMIYMKSTNANDGTMSIDITFVVGS
                     DPDMNTVLSQNRVSAASAKLPAEVTKYGVTTEKSLPNILMLVTLTSDGRYDQDFLGNY
                     ALINIKDQLSRISGVGRVDVLGASDYSMRIWVKPDRLAQMGITVSEIQNAINQQNVIV
                     PGGKFGAEPAPPGTEVTYTVRLPERFNSPEAFGEIVIRTTPEGSQVKIKDVATIDLGV
                     ETYNAFTRLNKKTCSAIAIYQSPGSNAVDLAKSVISEMDVLAKKFPDSVKYTVSLDAT
                     LPITAGIKDIVITLLIAVFLVVFVVFIFIQDWRATLIPTIAIPVSLVGTFIIFPLLGF
                     TINVLSLLGLVLAIGIVVDDAIVVVEAVQVNIAKGMKAKEATIEAMRKVSAPIIATTL
                     VLVAVFIPVASIVGITGRLYQQFAVTIVISVIVSSINALSLSPALSSLLLKEPTPYGG
                     WLDKFFGGFNKYMGKTTDAYMSFTNIVARKLKRSVVFIVIISIGAGLFSTLVPGGFIP
                     EEDMGYFFINIQLPNAASLQRSNAISKKIEDIILEIPEVEYVTTASGFSMLSGAMSSN
                     TGFMFISLKPWNERKLTAKEIIKELNPILFTKILGAQVFAFGPPALPGLGNGSGFSIM
                     IQDKGGNTPEYLAQQAAKFVAAANKRPEISNAFTTFQADVPQRYMDVDKEKALKLGVP
                     LNELYNTIGAFMGGSYVNDFTRFGRFYKAYIQA"
     gene            complement(2332..>3106)
                     /locus_tag="QF480_06370"
     CDS             complement(2332..>3106)
                     /locus_tag="QF480_06370"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HJN06222.1"
                     /translation="KSDLDATQAQYNAAKANVKAVESSVRIANINLSYCWIKSPISGL
                     IGKTQAKVGEFVGQDPNPVILNTVSTIDTVHVEFYLVEADYLGLARKFIESSRQKEDA
                     DYIEREATRDSELTLILSDGSIFNHKGHVNFIDRQVNPETGSLLIQTSFPNPDQLLRP
                     GQYAKVRAKMDVLKDAIMIPQRCVMELQGTHSVYIVNDSSIVKSRQIVTGSKYEDYWI
                     INKGLKANDKVVINALQKVVPGMPVIPKITDFENKTTTQ"
BASE COUNT          968 a          613 c          539 g          986 t
ORIGIN      
        1 gagcctgtat gtatgcttta taaaatcggc caaatcttgt aaaatcgttg acataagatc
       61 ctcccataaa tgccccaatc gtattatata gctcatttaa tgggacaccg agctttagtg
      121 ctttttcttt atcaacatcc atataacgtt gaggtacatc tgcttgaaaa gtagtaaagg
      181 catttgaaat ttccggcctt ttatttgcag ctgcaacaaa ttttgccgct tgttgtgcaa
      241 gatattcagg tgtattacca cctttatcct ggatcataat actaaaacca gatccattcc
      301 caagtccagg taatgcaggt ggcccaaacg caaatacctg agcacctaaa atttttgtga
      361 acaaaattgg atttaactct ttaataattt ccttggccgt aagttttctt tcattccatg
      421 gtttaagtga tataaacata aatcctgtat tcgaagacat ggcaccagat aacatactga
      481 accctgaagc tgttgttaca tattcaactt caggtatttc caaaataata tcctcaattt
      541 ttttagaaat agcatttgag cgttgcaatg aagctgcatt tggaagttga atattaatga
      601 agaaatatcc catatcttct tctgggataa aacctccagg aactaaagtg ctaaataacc
      661 ctgctccaat agagattata actatgaata caacacttcg ttttaactta cgtgctacta
      721 tatttgtaaa actcatgtaa gcatccgttg ttttccccat gtatttatta aatccaccaa
      781 aaaacttatc tagccatcca ccatatgggg ttggttcttt taataataat gaggatagtg
      841 caggacttaa tgaaagtgcg ttaatcgatg atactattac cgaaataact atagttactg
      901 caaactgttg atataaacga ccagttatgc ccactatact ggcaacaggt atgaatacag
      961 caaccaggac aagagtagtt gcaataatag gtgctgatac tttgcgcata gcttcaatag
     1021 ttgcttcttt ggctttcatt cctttcgcta tatttacctg aacagcttca acaacaacga
     1081 tagcatcatc aacaacaata ccaatagcaa gaacaagtcc aagaagtgag agtacattaa
     1141 ttgtaaatcc caataacggg aaaattataa aagtacccac taatgatacc gggatagcga
     1201 ttgtaggaat aagggttgct ctccaatctt gtatgaatat aaaaacaaca aataccacaa
     1261 gaaaaaccgc tattaacaag gttattacaa tatctttaat acctgcagta ataggaaggg
     1321 ttgcgtctaa cgatactgta tatttaacgc tgtcggggaa tttttttgcc agcacgtcca
     1381 tctccgagat tacactctta gctaaatcaa cagcatttga accgggagac tgatatattg
     1441 caattgctga gcatgtcttc ttgtttaatc tggtgaaagc attataagtt tcaactccaa
     1501 ggtcaatagt agcaacatct ttaattttta cttgcgatcc ttcaggagtt gttctgataa
     1561 caatttcacc aaaagcttca ggtgaattaa acctttcagg caggcggaca gtatatgtaa
     1621 cctctgtgcc aggaggagct ggttcagcgc caaacttacc acccggaaca ataacgtttt
     1681 gttgattaat tgcattttga atctcagaaa ctgttatacc catctgtgca agtctgtccg
     1741 gtttcaccca gatacgcatt gaataatctg aagcacctag aacgtcaact cttccaacac
     1801 cgctaatcct tgagagctga tcctttatgt tgataagtgc ataatttcct aaaaaatcct
     1861 gatcatacct tccatcggag gtaagcgtca ctaacataag gatatttggt agtgattttt
     1921 cagtagttac tccatatttg gtaacctcag cgggtagttt tgctgaggca gcactaacac
     1981 gattttgtga aagtaccgta ttcatatcag gatcggaacc aacaacaaat gtgatatcta
     2041 tactcattgt accatcattt gcatttgttg atttcatata gatcatattg tcaactccat
     2101 tgatctgttg ttctagtgga gttgctacgg attcttctac agttattgca tttgcgccaa
     2161 catacatacc tctaacttga acaacagatg gtgttaggtc aggatattgt tcaacaggta
     2221 atccaactaa cattacaaac ccaacaataa gtataacaat ggcaattacc agtgaaacaa
     2281 taggcctgtg tacgaaaaaa tttcctctat tctcagacat atctagaaag tttattgagt
     2341 ggttgtttta ttctcgaaat cagttatttt tggaattaca ggcatacctg gcactacttt
     2401 ctggagggca tttattacaa ctttatcgtt tgcttttagt cctttattaa taatccaata
     2461 atcttcatat ttggatccgg taacaatctg tcgggattta acaatgctac tgtcgttaac
     2521 tatgtaaaca gagtgagtgc cctgcaactc cataacacaa cgttgcggaa tcataatagc
     2581 atctttaaga acatccattt tagctcttac ttttgcatat tgaccgggac gtaatagttg
     2641 atcagggtta ggaaacgatg tttgaattag taacgaaccg gtttcaggat tgacctgacg
     2701 gtcgataaaa ttaacatgtc ctttatgatt aaagatggaa ccatctgata agattaatgt
     2761 aagttcacta tctctggttg cttctctttc tatgtaatca gcatcttctt tttgcctcga
     2821 gctttcaatg aatttccgtg cgaggcctag ataatcagct tctacaagat agaattccac
     2881 atgtactgta tcaattgtgg atacagtatt taaaattaca gggttgggat cctgaccaac
     2941 aaactcacct actttagcct gagttttacc aattaatcct gatattgggg atttaatcca
     3001 gcaatagctc aaattgatat ttgctatcct aacacttgat tcaacagctt taacattggc
     3061 tttagcagca ttgtactgtg cctgggtagc atcgagatcg cttttg
//
LOCUS       DASCQP010000375         1553 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001390496, whole genome shotgun sequence.
ACCESSION   DASCQP010000375 DASCQP010000000
VERSION     DASCQP010000375.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1553)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1553)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1553
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001390496"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1064)
                     /locus_tag="QF480_06375"
     CDS             complement(<1..1064)
                     /locus_tag="QF480_06375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06223.1"
                     /translation="MRLIITIAIITLSLFLFPKTILGQQLSNENIFVRLTKADSIYAS
                     KLPQLKLPKRYKLGKVRELPSELNNSLLPFFRPTFSQNSFWNCGQAAGVGYNFTYELN
                     AARGLNGNTLTNQYSPNFTYNFMNSGEGWGVSYFNSFDAIKKCGNPNLSDYGGLFNGG
                     DTRWMSGFELYENAMQNRIENVYAIDVGTPEGLTTLKYWLLDHLNGSEFGGVANFYFQ
                     FGWTGNLPPESPDTGFPVIIEAGEFAGHALTIVGFNDSIRYDINNDGQFTNDIDITED
                     GIVDMKDWEIGGLRYINSSLANNGAGYLMYRTLAFEYGSGGLWNQQMHVLTVKENYEP
                     LVNLRLKIAHNSRNKLKVIAG"
     gene            complement(1199..>1553)
                     /locus_tag="QF480_06380"
     CDS             complement(1199..>1553)
                     /locus_tag="QF480_06380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018452611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AIR synthase-related protein"
                     /protein_id="HJN06224.1"
                     /translation="LDSYRNQINGIIHCSGGAQTKVLHFIEDLHIIKNNMFPVPPLFK
                     LIQAQSGTNWEEMYKVFNMGHRMELYLPEEISDDIIKISQSFNIDAQIIGHVVKSESK
                     SLTIVSPYGTFTYAK"
BASE COUNT          493 a          287 c          252 g          521 t
ORIGIN      
        1 cctgcaatga cttttaactt gtttcttgag ttatgggcta tctttaagcg taagttcacc
       61 aaaggttcat aattttcttt tacggttagt acatgcatct gttggttcca tagtccacca
      121 gaaccatatt caaaagcaag agtgcggtac attaaataac cagcaccatt attagccaat
      181 gagctgttaa tataacgaag gccaccaatt tcccaatcct tcatatcaac tatcccatct
      241 tcagttatat cgatatcatt agtaaactgt ccatcattgt taatatcata tctaatcgaa
      301 tcattaaaac caactattgt caacgcatgt ccggcaaatt ctccagcttc aataattaca
      361 ggaaaaccgg tatcaggact ttcaggaggt agatttccag tccagccgaa ttgaaaatag
      421 aaatttgcta ctccaccaaa ttcagagccg ttaagatgat ctaataacca atatttaagt
      481 gttgttagtc cttcaggagt gcctacatca atagcatata cattttctat tcggttttgc
      541 atagcatttt catatagctc aaatcccgac atccatcttg tatctccacc attaaataat
      601 ccaccgtaat cagacaagtt tgggttgcca cattttttta ttgcatcgaa actattgaag
      661 tagctaactc cccaaccttc accgctattc ataaaattat aagtgaaatt cggagagtat
      721 tggtttgtta aagtattgcc gtttaacccc cttgcagcat tcagttcata tgtaaaattg
      781 tatccaactc ctgctgcctg cccacaattc caaaaggaat tttgagaaaa tgtaggacga
      841 aaaaatggca gtaaagaatt attgagttct gatggtaatt ctctaacttt tcctaatttg
      901 tatcgttttg gtagtttaag ttgaggtagc ttggatgcgt aaatagaatc agcttttgtt
      961 agtctgacaa agatattctc attacttaac tgttgcccca aaattgtttt aggaaataga
     1021 aacagactta aagtaatgat agctatagta attattaatc tcataaatta ctttgtttct
     1081 attatagacg ataaaagtaa tgaaatagtt tgcataattc aagaattatt tagaaactgt
     1141 gggaaaaagt tttgttcaag tctattatct tttgaggctt accaaacccg taaaggattt
     1201 actttgcata agtaaaagtg ccatatggag agactattgt aagactcttt gattcagatt
     1261 ttacaacgtg cccaattatt tgagcatcaa tattaaatga ttgtgaaatt tttatgatat
     1321 cgtcgcttat ctcctcaggt aaatataatt ccatacgatg tcccatattg aaaaccttgt
     1381 acatttcttc ccaattagta cccgattgag cttgtattag cttaaacaac ggtgggacag
     1441 ggaacatgtt gttttttata atgtgcaggt cttcaataaa gtgcaggacc ttagtttgtg
     1501 caccaccgct acaatgtata ataccattga tttgatttct gtaagaatcg agt
//
LOCUS       DASCQP010000376         3859 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001396660, whole genome shotgun sequence.
ACCESSION   DASCQP010000376 DASCQP010000000
VERSION     DASCQP010000376.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3859)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3859)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3859
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001396660"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..317)
                     /locus_tag="QF480_06385"
     CDS             complement(<1..317)
                     /locus_tag="QF480_06385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06225.1"
                     /translation="MKWTLLIILVFVMILCNSCSTSKKTAQNKDKEEDICESMTFNTR
                     PVNNISTDYYTIDSLFIIDNCLNIWASFSGGCSAFEFKLFYSNRVMESMPPKTSLLLQ
                     LTD"
     gene            complement(314..1036)
                     /gene="dapB"
                     /locus_tag="QF480_06390"
     CDS             complement(314..1036)
                     /gene="dapB"
                     /locus_tag="QF480_06390"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009860645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008839 - 4-hydroxy-tetrahydrodipicolinate
                     reductase [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HJN06226.1"
                     /translation="MNIIISGYGKMGKEIEKVCLKRNHKIIAKIDNEADWQNISDIDH
                     SSSVVIDFSMPDVAINIFLQCFKLGLPIVTGTTGWYDKFDQISEQCKLHNGTFFYAPN
                     FSIGVNIFFKANTYLAKLMSGMIDYKAKINETHHIHKLDAPSGTAIAAAEGIIKEHKK
                     LTTWLLNEDGTEKQLPIFSFREGEITGQHEVVYESDEDKITLKHEAKNRDGFALGAVL
                     AAEYIFGKKGVFNMADLMRQML"
     gene            complement(1049..1702)
                     /locus_tag="QF480_06395"
     CDS             complement(1049..1702)
                     /locus_tag="QF480_06395"
                     /inference="COORDINATES: protein motif:HMM:NF040144.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5683 domain-containing protein"
                     /protein_id="HJN06227.1"
                     /translation="MKKLINRVLSCLAILAISVCLTTEIYGQKIDKKDSTVVVKHSPR
                     KATLLALVPGLGQIYNKKYWKLPIVYAGFAATGYFAIWNRGEYLKYNNAYIANINNTN
                     NILVVRYDPEKGVYVSNLNERLTENELADKYDSDQLQSFRDYYRRNMELSFILMGVWY
                     ILQILDATVDAHLYYWEVNENLSVKVEPVFQQSITPTPLMLPHNNINHNGLKLTVKF"
     gene            complement(1713..2606)
                     /locus_tag="QF480_06400"
     CDS             complement(1713..2606)
                     /locus_tag="QF480_06400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007571519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HJN06228.1"
                     /translation="MSKNKRQALGRGLDSILSSPDTDITSEDISGKFVAGAIARIELG
                     KIETNPFQPRTNFDEMTLRELAESIKSQGIIQPITVRKMGYDKYQIIAGERRLRASQM
                     AGIKHMPAFIRVANDEQMLELALIENIHREDLNALEIAISYQRLIDEIKLTQEKLSEK
                     IGKSRSSISNFLRLLKLPPNVQVALRDNFITMGHARALITLPTRTIQEKILKVIISKG
                     LNVRQTEELVRKTSSPKSDKQKVPATKIPERFKNAPAILSQKLGTKVNLRRNNNGEGA
                     IVISFKNDEDLDKIISIIGDQ"
     gene            complement(2599..3402)
                     /locus_tag="QF480_06405"
     CDS             complement(2599..3402)
                     /locus_tag="QF480_06405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005935540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HJN06229.1"
                     /translation="MGKTIAITNQKGGVGKTTTAINLAASLAILEYKTLIVDADPQAN
                     ATSGIGFDPKQIQASIYECIIDDLNVENVILQTKTPNLDLLPAHIDLVGAEIEIINIP
                     EREKLMREVLNKVKSKYDFIIIDCSPSLGLITVNALTAADSVIIPVQCEYFALEGLGK
                     LLNTIKIVQSRLNENLDIEGILLTMFDIRLRLSKQVVEEVKTHFQQMVFNTIINRNTK
                     LGEAPSFGDSIIMHDANSTGAINYLNLARELLQKNDLTVMNNADKIIDE"
     gene            complement(3525..>3859)
                     /locus_tag="QF480_06410"
     CDS             complement(3525..>3859)
                     /locus_tag="QF480_06410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018338591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF3276 family protein"
                     /protein_id="HJN06230.1"
                     /translation="DDLFSKVVRAGKRTYFFDVKATRANQQYLTITESKRRFNEEQGK
                     FYYEKHKVFLYGEDFEKFKDGLNAAIDFIETGEENEEKPVEENEPKDEISSTVDVNFE
                     DLGEEGDS"
BASE COUNT         1112 a          724 c          626 g         1397 t
ORIGIN      
        1 ttatcagtaa gctgtagaag caagcttgtt tttggtggca tcgactccat caccctattg
       61 ctatagaata gtttaaattc aaaggcacta catcctccac taaatgaagc ccaaatatta
      121 agacaattat cgataatgaa aagtgaatcg attgtgtaat aatcggtaga aatgttgtta
      181 accggacggg tattaaacgt catagattcg caaatatcct cctctttatc tttattttga
      241 gctgtctttt ttgaggtaga gcaagaattg cataaaatca ttacaaagac caatattata
      301 agtaatgtcc atttcataac atttgtctca tcaagtcagc catattaaac acacctttct
      361 tcccgaaaat atactctgca gctaacacag ctcccagtgc aaatccatcc cggttttttg
      421 cttcatgctt tagtgtaatt ttatcttcat ctgattcata gactacttca tgttgtcctg
      481 ttatttcacc ttctctaaat gaaaatattg gcaattgttt ttcagttcca tcctcattta
      541 acaaccatgt tgtcaacttc ttgtgttcct taattattcc ttcagcagca gctattgcag
      601 ttccactcgg ggcatcaagt ttatgaatat gatgcgtttc gtttattttg gctttatagt
      661 caatcatccc cgacattaat ttagctaaat atgtgttagc tttaaagaaa atgttaaccc
      721 caatactaaa atttggagca taaaaaaaag tgccattatg taatttgcat tgctcagaaa
      781 tttgatcaaa tttatcgtac caaccggttg taccggtaac aataggtaat cccaatttaa
      841 agcattgtaa aaatatattt attgcaacat cgggcatgct aaaatcgata acaactgatg
      901 acgaatgatc aatgtctgaa atattttgcc agtcagcttc attatcaatt tttgcaataa
      961 tcttatgatt tcttttaagg caaacttttt caatttcttt gcccattttg ccatagcctg
     1021 agataattat gttcattatt agtgagagtt agaattttac tgttagtttt aatccgttat
     1081 gattaatatt gttatgaggc aacatcaaag gagttggagt aatcgattgt tgaaatacag
     1141 gttctacttt tactgaaagg ttttcgttaa cctcccagta atatagatgc gcatcaactg
     1201 ttgcatcaag aatttggagt atataccata ctcccattag tataaatgaa agctccatat
     1261 tgcgccgata gtaatctcgg aatgattgaa gttgatcaga atcatattta tcggctagtt
     1321 cattttcagt taacctttcg tttaagttac ttacatatac acctttctca ggatcatatc
     1381 ttactacaag tatattatta gtattgttaa tattagcgat atatgcgttg ttgtatttta
     1441 gatattcccc tctgttccaa attgcaaaat accctgtggc agcaaaacct gcatagacta
     1501 tgggtaattt ccaatatttc ttgttgtaaa tttgcccaag tccaggaaca agtgctagta
     1561 aggtagcttt tctaggagaa tgtttaacaa ctactgtgga gtcttttttg tcaattttct
     1621 gaccgtatat ttctgttgtt aagcaaactg aaattgccag aatagccaag caggaaagca
     1681 ctctgtttat caactttttc aaaatgtgaa tattattgat ccccgattat cgaaattatt
     1741 ttatcaaggt cttcatcgtt tttaaagctt ataacgattg ccccttcgcc attattgtta
     1801 cgtctgaggt ttacctttgt ccctaatttc tggctaagta ttgcaggtgc atttttaaat
     1861 ctttcaggaa tttttgttgc tggcaccttt tgtttatctg attttggtga tgaggttttc
     1921 ctaactagtt cttcagtttg tcgtacgttt aatcctttac tgataataac cttaagaatt
     1981 ttttcctgaa tagttctggt tggaagagta atcaaggcac gtgcatgtcc catagttata
     2041 aaattatctc gcagagcgac ctgaacgttt ggagggagct taagtaaacg taagaaattc
     2101 gatatcgatg atcgactctt tcctatcttt tcacttaatt tttcctgagt aagttttatc
     2161 tcatcaataa gacgctgata gctaatggca atttcaaggg cgttgagatc ttcgcgatgt
     2221 atattctcga taagagctaa ttccagcatc tgctcatcgt tagcaactct tataaatgcc
     2281 ggcatatgct taatgcctgc catttgagat gcacgtaaac gacgctctcc ggcaataatc
     2341 tgatatttgt cgtaacccat ttttcgtaca gtaatgggct gaattattcc ctgacttttg
     2401 atagattcag ctaattctct taacgtcatc tcgtcaaaat tggtacgtgg ttggaatgga
     2461 ttggtttcaa ttttacccaa ctcgattctt gcaattgcgc cagctacaaa tttacccgaa
     2521 atatcttcag aagtgatatc agtgtcagga cttgacagta tggagtcgag gcctcttccc
     2581 agggcttgcc gtttattttt actcatcaat tattttatca gcgttattca ttacagtcaa
     2641 atcgttcttc tgcaacagtt ctcgcgcaag gttgagatag tttatagcac cagtactgtt
     2701 cgcatcatgc ataataattg agtcgccaaa gctcggcgct tctcctaatt ttgtatttct
     2761 attaattatt gtattaaata ccatttgttg gaagtgagtt tttacttcct caacaacttg
     2821 tttggaaagc ctcagtctta tatcgaacat tgttagcaat attccttcta tatcgagatt
     2881 ctcatttagc cttgattgaa caatttttat tgtatttaac agcttaccta gtccttctaa
     2941 cgcaaaatat tcgcattgaa ctggtattat tacagagtcg gcagctgtga gtgcatttac
     3001 ggtaataagc cctaatgaag gtgaacagtc gattataata aaatcatatt ttgatttaac
     3061 tttattcaac acctcccgca ttagtttttc tctttcagga atatttatta tttcaatttc
     3121 ggcaccaaca aggtctatat gtgctggtag taaatcgagg ttgggagttt tggtctgcag
     3181 aattacattt tcaacattaa gatcatctat gatacactca taaatacttg cttgtatttg
     3241 tttgggatca aaaccaatac cagaagtggc atttgcttgt gggtcggcat ctactataag
     3301 tgttttgtac tccagtattg ctagactagc agcaaggtta atagctgttg ttgttttacc
     3361 aacacctcct ttttgattgg ttatagcaat agtctttccc ataataattt gtaattcgtt
     3421 ttagaagcca atcatcacta acaaaattac tatttaagat atttcgtgtc caaatagtga
     3481 gataaattta ttaacaactc aggttagcca gtcgttggaa gaggttaact atcaccttct
     3541 tcaccaagat cctcaaagtt aacatcaaca gtactgctta tttcatcttt aggttcattt
     3601 tcttcaactg gtttctcctc attctcttct cccgtttcaa taaaatcaat ggcagcattt
     3661 aatccatctt taaacttttc aaaatcttca ccataaagaa aaactttatg tttttcataa
     3721 tagaactttc cctgctcttc gttaaacctt cttttacttt cggttatagt taaatattgc
     3781 tgatttgcac gtgttgcttt aacatcgaaa aaatatgtgc gttttccagc tcttacaact
     3841 tttgaaaaaa gatcatccc
//
LOCUS       DASCQP010000377         6858 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001403387, whole genome shotgun sequence.
ACCESSION   DASCQP010000377 DASCQP010000000
VERSION     DASCQP010000377.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 6858)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6858)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6858
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001403387"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..749
                     /locus_tag="QF480_06415"
     CDS             <1..749
                     /locus_tag="QF480_06415"
                     /inference="COORDINATES: protein motif:HMM:NF015616.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycoside hydrolase family 76 protein"
                     /protein_id="HJN06231.1"
                     /translation="YIDAFRALGNKNYLRLAIQSASFLETKMLNEDGSLNRNYMNDKA
                     SIQAFLDDYALLAQSYMELYSVTFDKHWLDLSKKLADYCIDHFLDNETGMFFYTSDIS
                     ESLFARKHDLADNVIPASNSVMANVLLKLGHYFDNDNYIKMAERMFGHMEENVKNSGL
                     WYANWAMLMGTLSFDLNEVALVGKEAISINNEIQSNYLPTAMFLGRDVENLPLLEGKL
                     VNEETWIYVCRNKVCKLPVTNIEDAIKQID"
     gene            865..1509
                     /locus_tag="QF480_06420"
     CDS             865..1509
                     /locus_tag="QF480_06420"
                     /inference="COORDINATES: protein motif:HMM:NF024811.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family phosphatase"
                     /protein_id="HJN06232.1"
                     /translation="MSIKNIIFDFGGVVLDIDPQLTIDEFVKLGFTDFDKLSTPEFTD
                     EIIGKFERGILTPEVFRTKLKKFLDIDVTDQQLDDAWNSLLYDIPRERIEILEQGKKN
                     YQIILLSNSNEIHYDLFVRDLQLRFGYREFDDLFHKSYFSFDLHLLKPNSEVYEFVIN
                     QHGILPEETLFIDDKEENIVAAKKLGLRTYKLDKPERIRDIFIDGKLKSDLNIS"
     gene            complement(1540..2517)
                     /gene="dusB"
                     /locus_tag="QF480_06425"
     CDS             complement(1540..2517)
                     /gene="dusB"
                     /locus_tag="QF480_06425"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005850071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HJN06233.1"
                     /translation="MVKIDEISLGEFPILLAPMEDVTDPPFRYVCKMFGADMMFTEFI
                     SSEGLIRDAAKSVKKLDFEEFERPIGIQIFGHDIDSMVKAAQYAERANPDLIDINYGC
                     PVKKVVTKGAGAGILNDIPKMVKMTQAVVNSVTLPVTVKTRLGYDDEHKEIVEIAERI
                     QDVGVKAITIHGRTRTQKPRIPADWTLIGEVKNNPRMHIPVFGNGDVVDAVSAKYFKD
                     NFGVDGLMVARGVYGNPWIFNEIKHYLKTGEILPAPDIEERIRICTIQLEKSVEWKGE
                     RRGVLEIRKHWGDYFKGYPNFKPFRLKIMNSDSLDEILIILQEIKLFYS"
     gene            2767..3708
                     /locus_tag="QF480_06430"
     CDS             2767..3708
                     /locus_tag="QF480_06430"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HJN06234.1"
                     /translation="MKRIAFLSSLSPFGKLLLLIGIVFLFAITISFAGLVAGRFFFNT
                     PFGELANFIANPNTPTAVSFLKFYQIINQVGIFILPSIFFSYLVSNSSFTYLSLDKTP
                     RLISILVGGLIIYTILPFNNYLDELNRQLSLPDFLSGLEVWMKEKENQARELTELFLN
                     TRSLIGLFANIIIVAVLPAIGEELLFRGLLLKLFSNLFRNIHVGVILSAIIFSAIHLQ
                     FYGFLPRLALGMVLGYLFVFTGNLWVPIFVHFLNNASSAIVYYLHYNDYINIPMEDFG
                     SSSNIVYIIGSLLITIWLMIIIYQKEGAEITIKKRLH"
     gene            complement(3752..4213)
                     /locus_tag="QF480_06435"
     CDS             complement(3752..4213)
                     /locus_tag="QF480_06435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018338956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HJN06235.1"
                     /translation="MSRFKTKKGKGSPGINTSSLPDIIFMLLFFFMVTTVMREVSLKV
                     KLKLPQATEIQKLDKKSLVSYIYIGPPVKSKLYGTNSRIQLNDTFANIGDIQEFVAKE
                     REDRDEADRKFITTSLKVDGLTKMGIVTDVKQELRKAGALKINYSTRKGRD"
     gene            complement(4215..4793)
                     /locus_tag="QF480_06440"
     CDS             complement(4215..4793)
                     /locus_tag="QF480_06440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007836224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HJN06236.1"
                     /translation="MARRAAPEINAGSMADIAFLLLIFFLVTTTMDVDTGITRKLPPP
                     VEEQDDDIVVKDRNVLKVLINSHNRLLIDGKPGDISMLKQKAIDFMAIHPNDDSYPEY
                     QPKYIEELGIDIEASKGIISLKNDRGTSYDMYIAVQNELAAAFHEMKDELSLRLFGLK
                     YKQLIDKTKIKGINKAVPVRISEAEPEDIGGS"
     gene            complement(4800..5216)
                     /locus_tag="QF480_06445"
     CDS             complement(4800..5216)
                     /locus_tag="QF480_06445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06237.1"
                     /translation="MKDNIANITKWILYLLLALSVIPGVLFYTNVISPGTFINWAKIL
                     LIIGVAVMFLSPIYGFITNPQNIIKMLISIGVMVVVIVIAYAVAGNEFTEYQLEELRT
                     TAHTSTLVGMGLYATYITFGLTVVAIFYASISKIFK"
     gene            complement(5222..6046)
                     /locus_tag="QF480_06450"
     CDS             complement(5222..6046)
                     /locus_tag="QF480_06450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019130771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HJN06238.1"
                     /translation="MRKFIALLSLIIMTSAAMLNYSYAQDYVAEDTTAIVESIAGDST
                     TPAEEIAQDVAEIATEPDKPQSFHQILKEKFIEGGPGFMGVVLLALIFGLAISIERII
                     YLSMASINTKKLLTNVESALESGGIDGAKEVVRDTKGPVASIFGEGLNRYNDGLGEVE
                     KAIIAYGSVVTGRLESGVSWISLFIALAPMLGFMGTVIGMIKAFDDIAAAGDISPTVV
                     ADGIKVALLTTVFGLIVAIILQIFYNYIISKIENLVNDMEDSSIAFIDLLNQFSKK"
     gene            complement(6754..6841)
                     /locus_tag="QF480_06455"
     tRNA            complement(6754..6841)
                     /locus_tag="QF480_06455"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6805..6807),aa:Ser,seq:gga)
BASE COUNT         2142 a         1219 c         1135 g         2362 t
ORIGIN      
        1 catatattga tgcgttcagg gcgttgggta acaaaaatta tttacggtta gcaattcaaa
       61 gcgcttcatt cctcgaaaca aagatgctta atgaggatgg tagtttaaat agaaactaca
      121 tgaacgacaa agcctctata caggctttcc ttgacgatta tgctctgctg gcccagtcat
      181 atatggaatt atattctgta acttttgaca agcattggct cgacctaagc aaaaaactag
      241 ctgattattg cattgatcat tttttagata atgaaacagg gatgtttttc tatacttctg
      301 atatttctga aagtcttttc gccagaaaac atgaccttgc tgataatgtt atacccgcct
      361 ccaattcagt gatggcaaac gtactgttaa agttagggca ttattttgat aatgataatt
      421 atataaaaat ggctgaacgc atgtttggcc atatggagga aaacgttaag aattcaggat
      481 tgtggtatgc gaactgggca atgttgatgg gaaccttaag ttttgatcta aacgaagttg
      541 ctttagtggg caaagaagcg atttctatca ataatgaaat acaatcaaac tatctaccaa
      601 ctgcgatgtt tttaggtcga gatgtagaaa accttccctt gcttgaaggc aaacttgtga
      661 acgaagaaac ctggatttat gtatgtagaa ataaagtatg taaacttccg gttactaata
      721 ttgaagacgc gattaaacaa attgattagt ctggtaaccc atattttaaa aagtcagtct
      781 ataatttaag aattacttaa tttcattatg tttttcttga tgtattatta tgtttaggta
      841 tatttgtggc gataaaaaaa cgtaatgagt ataaaaaata taatttttga ttttggtggg
      901 gttgtattgg atattgatcc acaactaacc attgatgaat tcgttaaact tggttttacc
      961 gattttgata aactatcaac tcctgagttc actgatgaaa ttatcgggaa atttgagcgt
     1021 gggatactta cacctgaagt gtttcgcacc aaacttaaaa agtttttaga tattgatgta
     1081 accgaccagc aactcgatga tgcatggaat tcattgcttt atgatatccc cagagaaaga
     1141 attgagattc ttgaacaggg gaagaaaaac taccaaatta ttttactaag taactctaac
     1201 gaaattcatt acgatctatt tgtgagagat ttacaattac gttttggata tcgtgaattt
     1261 gatgatctat ttcataaatc atatttttcg ttcgaccttc atttgttgaa accaaactct
     1321 gaggtttatg aattcgtcat aaatcaacat gggattctac ctgaagaaac tttgtttatt
     1381 gatgacaaag aggaaaatat tgtagccgcc aaaaaactag ggttaagaac ttataagctt
     1441 gataaacctg aaagaataag ggatatattt attgatggta aacttaaatc tgatctgaac
     1501 attagttaat taaagtcgta tttgtaattc gggttagggt tacgaataaa ataattttat
     1561 ttcctgaagt attataagga tttcatcaag cgaatctgaa ttcattattt tcaacctaaa
     1621 tggtttaaaa ttaggatatc ctttaaaata atctccccaa tgctttcgta tttccaacac
     1681 acctcttctt tcacccttcc actcaactga cttttcaagt tgaattgtac atattcttat
     1741 tctctcttct atatcaggtg caggtaatat ctctcctgtt ttcaaataat gttttatctc
     1801 attgaatatc catgggtttc cataaacacc ccttgctacc atgagcccgt ccactccaaa
     1861 attatcttta aaatattttg cagaaacagc gtctacaaca tctccattgc caaataccgg
     1921 aatatgcatt ctaggattgt ttttcacttc tcctattaat gtccagtcag ccggaatacg
     1981 tggtttttgt gttctggtcc gtccgtgtat tgtgattgcc ttaacgccaa catcttgtat
     2041 tctttcggct atttcaacaa tctctttgtg ctcatcatca tatccaagac gtgttttgac
     2101 agttaccggc aatgtaacag aattcacaac tgcctgtgtc atttttacca tttttggaat
     2161 gtcatttagt atgccggcgc cggcaccttt tgttacaact tttttaacgg gacaaccata
     2221 atttatatca ataagatcgg gatttgctcg ctcggcatat tgggctgctt ttaccatcga
     2281 atcaatatca tgtccaaata tctgtatgcc gattggacgt tcaaactcct caaaatcgag
     2341 ctttttaaca ctttttgcgg catcgcgtat taatccttca gatgagataa attctgtaaa
     2401 catcatatcg gcaccaaaca ttttgcacac atacctgaat ggaggatcgg ttacatcctc
     2461 cataggtgca agcaggattg gaaactcgcc aagacttatt tcatctattt ttaccaacga
     2521 ttattatgaa ttagtttaat ttattaaaat tggtgtgttc cttttctttg gcatattaat
     2581 aattaaaatg atgcatggaa atatggatat aatggaataa ggataattta aagaacccat
     2641 attaaccata tacccaatat taccctattc ctgttaggaa attaatattc aattaacagg
     2701 atttagtaac tacaagttct gtgcaaaaat attaattttg ctcttcttta agaatcaaca
     2761 gttgtaatga aaagaattgc attcttgtct tcactttctc catttgggaa actgttatta
     2821 ttaattggga ttgtattttt attcgctatt actatatcct ttgcaggtct ggtagcaggt
     2881 aggttttttt ttaatacccc attcggtgaa cttgctaatt ttatagcaaa cccaaatact
     2941 ccaacagcag tttcttttct taaattttac caaataatta atcaggttgg aatttttatc
     3001 cttccgtcaa tattcttctc atatcttgta agtaattcat cttttacata tctttctctt
     3061 gataaaacac caaggttaat aagtatactt gttgggggat taattattta tacaatatta
     3121 ccttttaata attacttaga tgaacttaac aggcaactaa gtttacctga ttttctttca
     3181 ggtttagaag tatggatgaa agaaaaggaa aatcaagcaa gagaattaac agaattattt
     3241 ttaaacactc gctcattaat tggtttgttt gcaaatatta ttattgtggc agtactccca
     3301 gctattggtg aagagttact atttagaggt ttattgttga aactttttag caatcttttt
     3361 agaaacattc atgttggtgt tatattgtcg gcaataattt ttagtgctat tcaccttcag
     3421 ttctatggat ttttaccaag attagcactg ggtatggtac tgggttattt gtttgttttt
     3481 acgggtaatt tgtgggttcc catttttgtt cattttttaa acaatgcttc ctcagcaatt
     3541 gtatactacc tgcattacaa tgattacata aatattccta tggaagattt tgggtcgtca
     3601 tcaaacatag tttatataat tggcagttta cttattacaa tatggcttat gataattatt
     3661 taccagaagg aaggggcaga aattaccata aaaaaaaggc tgcattaata aatgcagcct
     3721 agatatttca ttttaagaat ttgattaata atcaatctcg tcctttacgt gtagaataat
     3781 tgattttaag tgcgcctgct tttcggagtt cttgttttac atctgtaaca attcccatct
     3841 tggtcaggcc atctacttta agggaggttg ttatgaactt cctgtcagct tcatctctgt
     3901 cttctctttc tttggctaca aactcctgaa tatctccaat atttgcaaac gtgtcattta
     3961 attgaattcg agaatttgtt ccgtaaagtt ttgattttac aggaggtcct atgtaaatat
     4021 aactaactaa tgatttcttg tcaagctttt gaatttctgt tgcctgtggt aattttaact
     4081 tcaccttaag agatacttca cgcattaccg tagttaccat aaaaaagaac agtaacatga
     4141 aaataatatc gggtaacgac gaagtattta tcccgggaga tccctttcct ttttttgttt
     4201 taaatctcga catactaact gcctcctata tcttctggtt ctgcttcgga aatacgaaca
     4261 ggaactgctt tattaattcc tttgatttta gtcttatcaa tcagctgttt gtatttaaga
     4321 ccaaataatc taagtgacaa ttcatctttc atctcatgaa acgcagctgc aagttcgttt
     4381 tgaacagcaa tatacatatc atacgatgta cctctatcgt ttttcagtga tataataccc
     4441 tttgaggctt caatatcaat tccaagttct tcgatgtact taggctgata ttctggataa
     4501 ctgtcatcat taggatggat ggccataaaa tcgattgctt tttgttttag catacttatg
     4561 tcgccaggtt taccatcaat aagaagacgg ttgtggctgt ttataagaac ctttagtacg
     4621 tttcggtctt taacaacaat atcatcatcc tgctcctcaa ccggtggagg taattttctg
     4681 gtaataccag tatcaacatc cattgttgtg gttacgagga aaaatataag cagcaggaag
     4741 gcaatatccg ccatcgaacc agcattaatt tcaggagctg ctcttctagc catactttat
     4801 tatttaaaaa ttttacttat tgatgcataa aaaatggcaa cgacagtcaa gccaaacgta
     4861 atataagttg catacaatcc cattccaact aaagtagatg tgtgggcggt tgttctcaat
     4921 tcttccaatt ggtactctgt aaattcatta ccagcaactg cataggcgat tacaataacc
     4981 acaaccatta caccaatgct aatgagcatt tttataatat tttgcggatt tgtaataaat
     5041 ccataaatag gagataaaaa cattacagct acaccaatga taagcaatat ttttgcccag
     5101 ttgataaaag ttcctggact aatcacatta gtgtaaaaca acactccagg aatcactgaa
     5161 agtgccagca acaggtacaa aatccatttt gttatattgg caatattatc tttcatgatt
     5221 cttatttttt actgaattgg ttaaggagat caataaatgc aattgaactg tcttccatat
     5281 cgttaacaag attctcaatc ttcgaaatga tataattgta gaagatttgg aggataatag
     5341 caacaataag accaaacacg gtagttaaca aagccacttt aataccatca gcaacaacag
     5401 taggtgaaat atctccggca gctgcaatat catcaaatgc tttgatcata cctataaccg
     5461 tacccataaa tccaagcatc ggcgccagtg caataaacaa tgaaatccag cttacgccac
     5521 tttcaagtct gccagtaaca acacttccat atgctattat agctttttca acttctccta
     5581 aaccgtcatt ataacgattc aggccttcgc caaaaatact agccacggga ccctttgtgt
     5641 cacgcacaac ttcttttgca ccatcaatgc ctccgctttc gagagcagat tcaacgtttg
     5701 tcaacaactt tttggtgtta attgatgcca tgcttaagta aataatacgt tcgatactaa
     5761 ttgctaaacc aaagataaga gctaataata caacgcccat aaatccagga ccaccttcaa
     5821 taaacttttc ctttaggatc tggtgaaatg attgtggttt atcaggttct gttgctattt
     5881 cagcaacatc ctgagcaatt tcttctgctg gtgtagttga atctccagca attgattcaa
     5941 caatagcagt tgtgtcttca gcaacataat cctgtgcata agaataattt aacatcgctg
     6001 cggaagtcat aataattaaa gaaagtaaag caataaattt tctcatgatt gtaaaaatta
     6061 tattcggttt ttattttact ttttagagtc gacaaagtta taaatatatt ttaaaatcaa
     6121 tacttattac tctttgtctc aattattcaa acggcaaata taaaaatata tgattgttct
     6181 tacagaaata tttaaaaata atcttatttc aaaatcatta ttagcgtatg aacaacctta
     6241 tccaaaaaga aattgttata ccaaaataac gactaccgta tttaaatgtt gtactaatta
     6301 gtgattaagc tcataactat aagtatcaga actcaagtat ggggattaat tgcattgatc
     6361 ccagtatgga gatcctggta tgcatagaaa cccaatcctc tggtgaggat tttgtgtttt
     6421 taattttctt ttcgcattga caaacaagtt tgtcaaagca gaagaaattg aatcgttcat
     6481 tagggattaa ttgcattgat ccctggggga agtacctggc atgcatagaa acctaatcct
     6541 ctggtgagga ttttgtgttt ttaattttaa cgttagtttc aaacttgata ggattaactg
     6601 cgttgatccc tgagggggag aacctggcat gcatagaaac ccaatcctct ggtgaggatt
     6661 ttgtgttttt aattttcttt ttgctttggc aaacgagttt gccacgctct agaaaaacaa
     6721 aaacccacaa cttctgttgt gggtttcctt atgcggagag agcgggattc gaacccgcgg
     6781 tacacttttg gcgtacacac gctttccaag cgtgctcctt aagccactcg gacacctctc
     6841 ctttacttat atgtctta
//
LOCUS       DASCQP010000378         5910 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001409308, whole genome shotgun sequence.
ACCESSION   DASCQP010000378 DASCQP010000000
VERSION     DASCQP010000378.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 5910)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5910)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5910
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001409308"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..2847
                     /locus_tag="QF480_06460"
     CDS             <1..2847
                     /locus_tag="QF480_06460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06239.1"
                     /translation="LNTLDLEVNGVPEVSISDSQEVYIYPYDKTISFKKNRDFTFDGQ
                     VHMGLLDFYSRNSTFVYDSFMLKMNYVDSLAFKVYSNDSLKLSDSLIRVKNVIVDMVG
                     SIYIDQPFNKSGLKKYEEFPKFRSNDVSYVYFNKKSIQDSTLIPESFYFAVDPFIFDS
                     ISTFTTEGLSFEGNLKSVGIFPVIEQPLVVMPDYSLGFNHLTPDAGYDIYGGLGKFSS
                     LVSVSNQGFKGNGNLFYLSSYSSSDNHTFYPDSLIGVSNDFRVMKSPDKYNFPSVQGD
                     TVNIQWVTDTNVMTLSSDAGPFILYDNSWLTGRLFLNPDYMRGVGSFLFDQSEIVSNH
                     INFNYSMLTADTADFLLRNSLNDSIVFDVRDYFAKIDFDKNQGWFNHINDNSFVKFPF
                     NNFISTLDEIEWLMDDDKLLLSSNLADDYKGLDTLNILQLIDYKLYGPEFISINEDQD
                     SLRFFAGNATYNLIDYIIDVEKVRLIKVADVAIFPGGETVNILRGAKINTLTDALIIA
                     DTANTYHSIYDAEVNIYGKNQFTAKGWVDYSDRNGMKQPVYLSSISVNEDGTTMGFGQ
                     IPDGEIFFLSPEYNFKGEIGLMANRKNLRFNGGYKINEECVVNIDNWVAFNQVLEPSN
                     IYFDVNSNTSDALGRPAFFGLAYSDQYRRFYPLVLEPISKPSDLIFINATGQMKFDTI
                     NRAFSVGSASRFSKNNLEGNYVSLDNSRCIMRGDGNFNLGLDLNMVTIKSSGTFEHLI
                     LVDSTYINTVLLLDFYFDEEALGMMTDSIRLTNNEGGNLSEGLFPMFLMKNLINEEAE
                     RHISELALYGQMRKISEQLNHSIIFSDLKFYWNSFSRSYISKGKIGLGYLGGNVINKY
                     VNGWVQIEKGRTGSSISIFIEPSRKTWYYFNYKNGIMQVLSSDNAFNERLETIKPEKR
                     ILNSNSDLDYYEYVISTRRKSVEFVRKMEEIERK"
     gene            3123..4244
                     /gene="dnaN"
                     /locus_tag="QF480_06465"
     CDS             3123..4244
                     /gene="dnaN"
                     /locus_tag="QF480_06465"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HJN06240.1"
                     /translation="MKFIISSTTLLRGLQKVSGVLGTNNTLPILEDFLFELTKDKLCI
                     TASDLETTISVTLTTDMAEGPGVIAIPAKMLQDIMKTLPEMPVTISVVDTSIEIFAGE
                     GKYKLIGHQSDEFPQVLVMDNTVSLELNSAMLVNAFNKTLFATGNDELRPVMSGVLFE
                     VTGESITFVATDAHKLVRYRRTDFSSSTPTSIILPKKPLNHLKNVMSEDEEVSVKMEI
                     NDTNAMLKFDDIVLICRLIDGKYPNYEAVIPTQNPFSLSIDRKNLLNAIRRVSIFGSK
                     STHQVRFKISGKELLLTAEDLDFSSEAKERLTCSYEGDDIEIGFNSRFMQEMLNTLEP
                     ERIIIEMSAPNRAGIIVSEKEADDPEDILMLIMPVMLTQ"
     gene            4261..5421
                     /locus_tag="QF480_06470"
     CDS             4261..5421
                     /locus_tag="QF480_06470"
                     /inference="COORDINATES: protein motif:HMM:TIGR04350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PatB family C-S lyase"
                     /protein_id="HJN06241.1"
                     /translation="MYDFDKIIRRESTANYKYDLRDRFFGKDDVIPLWVADMDFETPV
                     FIREAILKRVKHPIYGYSFREESYYKSIVEWVQNRHNWTIDADWIVYSPGVVPALNLS
                     TVQFTNEGDSIIVQPPVYFPFFSAVTDNKRVQLSNQLILKNGRYYIDFEDFEQKAQKA
                     KMCFLSSPHNPVGRVWTKEELLRLGEICVRNNVIIISDEVHNDLILPGIKHIPLASLS
                     PEISDITVTCIAPSKTFNLAGLSTSSVIISNKDLKDKFEDILNRFHLSFGNLFGAIAS
                     EAGYTFGAQWVDELNEYINANYKEVEQALKRSGSNIKLIVPEATYLAWLDFRDTGYND
                     DQIKDILINSARLGLSHGPSFGDGGQGFQRMNLAAPRSIIKEAMGRLIKAFK"
     gene            5478..>5910
                     /locus_tag="QF480_06475"
     CDS             5478..>5910
                     /locus_tag="QF480_06475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06242.1"
                     /translation="MKRLFVILILVIAVFKMANSQEYIYQRGLATLSMGIAIPAYDFG
                     RMKGVNLSSYAKVGTNITGEIAYFYSWHVGVAFMLNYNVNPVDKNRLSNGYIDSSPAF
                     KTANASTEPFRDISGLAGLVFDIPPNEYISFTFKMMGGLRNV"
BASE COUNT         1950 a          858 c         1134 g         1968 t
ORIGIN      
        1 ctgaatactc ttgatttgga agttaatggg gttccagagg taagcatcag cgattcgcaa
       61 gaagtatata tttatcccta tgacaaaaca atttctttta agaaaaatag ggattttaca
      121 tttgacggac aagttcatat gggcttattg gatttttatt caagaaatag caccttcgtt
      181 tacgatagct ttatgctgaa aatgaactat gtagactcac ttgcgtttaa ggtatattca
      241 aacgattcgc ttaaactgag tgattcactc attagagtaa agaatgtaat tgtagatatg
      301 gtgggaagta tttatataga ccaaccattt aataaatccg ggttaaagaa atatgaagaa
      361 tttccaaaat ttagaagtaa cgatgtaagc tatgtttatt tcaacaaaaa atcaatacaa
      421 gatagtactc taataccaga aagtttctac tttgcagtag acccatttat ttttgatagt
      481 atttcaacat ttacgactga aggactgtcg tttgagggga acctgaaatc tgtaggaata
      541 ttcccggtta ttgaacaacc gcttgtagtt atgcccgatt actcattggg attcaaccat
      601 ctaacacctg atgcgggtta tgatatttat ggagggttag gtaaattcag ttcgcttgta
      661 tctgtaagta accaaggttt taaaggaaat ggaaacttat tttatttgtc gtcttactcc
      721 tcatcagaca atcatacatt ttaccccgac tcattaattg gtgtaagtaa cgattttaga
      781 gtaatgaaaa gcccagacaa atataatttt ccatcggtac agggagatac agttaacata
      841 caatgggtaa ccgatacaaa tgtaatgaca ttatccagtg atgcagggcc ttttattctt
      901 tacgataatt catggttaac tggtaggttg tttttaaacc ctgattatat gcgaggcgtt
      961 ggttcatttc tatttgatca atcggagata gtttccaatc atattaattt taactatagc
     1021 atgcttacag ccgacacagc tgatttcttg ctgaggaata gcttgaacga ttctattgta
     1081 tttgatgtgc gggattattt tgctaaaatt gattttgata aaaaccaggg ctggtttaat
     1141 catataaatg ataattcatt tgtcaagttt cccttcaata attttatttc tactcttgat
     1201 gaaattgaat ggttgatgga tgatgataaa ttattgttga gcagcaatct ggcagatgat
     1261 tataaaggtc ttgacactct taatatctta caattaattg actataagct ttatggccca
     1321 gagtttatct caataaatga agatcaggat tcactgaggt tttttgccgg taatgcaact
     1381 tataatctta ttgattatat tatcgacgtt gagaaagtca ggctaattaa agttgctgac
     1441 gtcgcaatat ttccaggtgg cgaaactgtg aacatattga gaggtgcaaa aattaataca
     1501 cttactgatg ccttaattat tgcagacact gcaaatactt atcatagtat ttatgatgct
     1561 gaagtcaata tctatggaaa gaatcagttt acagccaaag gttgggttga ttattctgat
     1621 agaaatggca tgaaacaacc agtttactta agcagtatat ctgtcaatga agatggaact
     1681 actatgggtt ttggtcaaat tccagatgga gaaattttct ttttaagtcc cgaatataat
     1741 ttcaaaggag aaattggctt gatggcaaat agaaaaaatc taagatttaa tggtggttat
     1801 aaaattaatg aagaatgtgt tgtaaacatt gataattggg tagcatttaa tcaggtcctt
     1861 gaaccaagta atatttattt tgatgttaat agtaatacta gtgatgcatt aggaaggcct
     1921 gcattctttg gtcttgccta ttctgatcaa tacagaagat tctatccatt agtactagag
     1981 cctataagca aaccatctga tttgattttt atcaatgcaa ccggacaaat gaaatttgac
     2041 acgatcaata gagcattttc tgtaggcagt gcaagccggt tttctaaaaa taatctggaa
     2101 gggaattatg tttcacttga taattcaagg tgcattatgc gaggtgatgg taattttaat
     2161 ttgggtttag atcttaatat ggttactatt aaatcctctg gaacttttga acatctaatc
     2221 cttgtggatt ccacctatat aaacacagta cttcttctgg atttctattt tgatgaagaa
     2281 gccctcggaa tgatgacgga tagtattcgt ttaaccaata atgagggcgg caatttatct
     2341 gaaggtttat ttccaatgtt cctgatgaaa aatctaataa atgaggaagc tgaacgacat
     2401 atctcagaat tggcgctcta cggacaaatg agaaaaatat ctgaacagct taatcatagt
     2461 attattttta gtgatctgaa attctattgg aattctttca gccgatcgta catttctaaa
     2521 ggtaaaattg ggctaggcta tcttggaggc aatgttatta ataaatatgt taatggatgg
     2581 gtacagattg aaaaggggag gacaggaagc agtatttcaa tatttattga accttccaga
     2641 aaaacatggt attactttaa ttacaagaat ggaattatgc aagtgttatc atctgataat
     2701 gcatttaatg aacgacttga aacaatcaaa cctgaaaaaa gaattttaaa ttcaaatagt
     2761 gatttagatt actatgaata tgttatctct acccgaagaa aaagtgttga atttgtaagg
     2821 aagatggaag agatagaaag aaaatagttg atgatcactt ggaataaacc tggacgattt
     2881 acttcttata tcctattgtg aaaaactgtt caataagtcc tggttggcaa tgttattttt
     2941 tttcataatt ttacccacat gttggagaat gcgtgaattt taattttaga atttattatg
     3001 ttgtgttttc tgaaagatta aaatattttt agacacaaat gaagtataaa agctaaagtt
     3061 aaatgttctc aaatgtttga aattagaata atatgttcta tcaaaaaata aaattttaac
     3121 agatgaaatt tatcatatca agtaccacct tgttacgggg attgcaaaaa gttagtggcg
     3181 ttttgggaac caataataca ttacccattc ttgaagactt tttatttgaa cttaccaaag
     3241 ataaattatg tattacagcc tctgacttag aaacaaccat atctgtaaca ctaactaccg
     3301 acatggcaga aggtcctgga gttattgcta ttcccgctaa gatgctgcaa gatattatga
     3361 aaacccttcc agaaatgccg gttacaatat ctgttgtaga cacaagtatt gaaatttttg
     3421 ctggcgaagg taaatacaaa ctcattggtc atcaaagtga tgaattccca caggtgctag
     3481 taatggataa tacagtttcg ctggagttaa attcagcaat gcttgttaat gcatttaaca
     3541 aaaccctttt tgctacagga aatgatgaat tgcgacctgt tatgtcaggg gtactttttg
     3601 aagttaccgg agaaagcata actttcgttg ctactgacgc acacaaactt gttaggtaca
     3661 gaagaactga ttttagttcc tctacaccta catcaataat tcttcccaag aagccactta
     3721 atcatcttaa aaatgtaatg tcagaggatg aagaagtttc ggttaaaatg gaaattaatg
     3781 atacaaatgc catgcttaaa ttcgatgaca tagttttgat ttgtcgattg attgatggta
     3841 agtatccaaa ttatgaagct gtaataccaa cacaaaatcc ttttagcctg tcaatcgata
     3901 gaaaaaactt gctaaatgca atacgcaggg tgtctatttt tggtagtaag tcgactcatc
     3961 aggttaggtt taaaatttca ggaaaagaac ttctgttaac tgccgaagat cttgatttct
     4021 caagtgaagc aaaagagagg ctaacttgta gttatgaagg agatgatatt gagattggtt
     4081 ttaattcaag attcatgcaa gagatgctca acactcttga acctgagcgt attataattg
     4141 aaatgtctgc accaaaccgg gctgggataa tagtatctga aaaggaagct gatgatcctg
     4201 aggatattct aatgcttata atgcctgtta tgctcaccca gtagtactag ttctgtttcc
     4261 atgtacgatt ttgataagat tatcagaaga gaatcaactg caaattataa atatgatttg
     4321 cgagataggt tcttcggaaa agatgatgta atacctttgt gggtggccga tatggacttt
     4381 gaaactcctg tttttataag agaagcaata ctaaaacgag taaagcaccc aatttatggg
     4441 tattcatttc gagaagaatc gtattataaa tcaatagtag agtgggttca aaatagacat
     4501 aactggacta ttgatgctga ttggatagtt tatagtcctg gagtagtacc agcattaaat
     4561 ctgtcaactg ttcaatttac caatgaagga gatagtatta ttgtacagcc tcctgtttat
     4621 tttccatttt ttagtgcagt tactgacaat aagagggtac agctaagtaa tcaattaata
     4681 ttaaaaaacg gaagatatta cattgatttt gaagattttg aacaaaaggc acaaaaggca
     4741 aaaatgtgct ttctgtcaag tcctcataat cctgttggtc gtgtttggac caaggaagag
     4801 ttattgagat taggagagat atgtgttcga aataatgtta ttattatttc tgatgaagtt
     4861 cataacgatt taattttacc tggtatcaag catattccct tggcatcttt gtcacccgaa
     4921 atttctgata ttacagttac atgtattgca cctagcaaga cttttaatct tgcaggttta
     4981 tcaacttcgt cggtaattat ttctaataaa gatctaaaag ataaatttga ggatatactt
     5041 aaccggtttc atttgtcttt tggtaacttg tttggagcga ttgcttcaga agctggctat
     5101 acttttggtg cacaatgggt tgatgagttg aatgaatata ttaatgccaa ttacaaagag
     5161 gttgaacagg ccttgaaaag atctggaagt aatattaaac ttatcgtccc tgaggctact
     5221 tatctggctt ggcttgattt tagggatacc ggttacaacg atgatcaaat taaagatata
     5281 ttaataaata gtgctaggtt aggattgagt catggacctt cttttggaga tggaggacag
     5341 ggttttcaga gaatgaacct tgcagcacca agatctataa taaaagaagc tatgggaaga
     5401 ttaatcaaag cttttaaata gagtgaatac ggaattaatc aatctttttt gtaatttgct
     5461 ccaaaatcaa atattaattg aaacgcctat ttgtaatact aattcttgtt atagctgttt
     5521 ttaaaatggc taattctcag gagtatatat atcaaagagg tttagctact ttgtcaatgg
     5581 ggattgcaat tcctgcttat gattttggta gaatgaaggg tgtcaattta agtagttatg
     5641 ctaaagttgg tactaacata acaggtgaaa tagcatattt ttattcatgg catgttggcg
     5701 ttgcttttat gctgaattat aatgttaacc cagttgataa aaaccgttta tctaatggtt
     5761 acatagattc gagtcctgcc tttaaaactg caaatgccag taccgagccc tttcgtgaca
     5821 tttcggggtt ggcgggctta gtatttgata ttccgcctaa tgaatacatt tcatttacat
     5881 ttaaaatgat gggcggactt agaaatgttt
//
LOCUS       DASCQP010000379         3379 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001411310, whole genome shotgun sequence.
ACCESSION   DASCQP010000379 DASCQP010000000
VERSION     DASCQP010000379.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3379)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3379)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3379
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001411310"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..482)
                     /locus_tag="QF480_06480"
     CDS             complement(<1..482)
                     /locus_tag="QF480_06480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008158604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD hydrolase family protein"
                     /protein_id="HJN06243.1"
                     /translation="MANYKEKLKKVTTFIFDYDGVMTDGALILQHEGNPLRSANVKDG
                     YVLQLAIKLGYNVVIISGGFSQSVENRFGALNITDVFLGIKDKVVIFNDYIKKKNINP
                     EHIVYMGDDIPDYIVMKMVGVPVCPADAVQEIKSISLYISDKNGGKGCVRDIIEQVLK
                     V"
     gene            complement(475..1263)
                     /locus_tag="QF480_06485"
     CDS             complement(475..1263)
                     /locus_tag="QF480_06485"
                     /inference="COORDINATES: protein motif:HMM:NF022188.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rossmann-like and DUF2520 domain-containing
                     protein"
                     /protein_id="HJN06244.1"
                     /translation="MNTTNQILTVSIIGSGNVATALGEVISSNGIRVLEVFSPNIDNS
                     KLLAEKVGCNYVENIEKLNTISDLYIIAIPDNEISNVITKLKSKEGIMVHTSGSQPSD
                     VFEGKFHHYGVFYPLQTFTKGKQVDFQEVPICIEGSNDITSELLVQLAKKISNNVVLL
                     NSEKRQYLHLTAVTVNNFSNLLYNLAHDVLNEKDIDFSLLHPLIKETAVKIRDVNPYQ
                     AQTGPALRKEISTINKHLELLDKYSEYKEIYNLLTRQIINKHHG"
     gene            complement(1266..1832)
                     /locus_tag="QF480_06490"
     CDS             complement(1266..1832)
                     /locus_tag="QF480_06490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06245.1"
                     /translation="MSEMIEFLKIIIPTIAVLIVVYIMMREFTRQNSKQFDFLKEEQR
                     LLKVKMENEKKSNNSKTSMPLRFKAYERMSLFLERINPPNLITRVLKPNANVKVLHSS
                     LLTTIREEYEHNLSQQLYVSDTAWELVKAAKEDVVRLVNSAATKFNSDDDANKFAQEI
                     ITHGFNTKHNPIDSAISALKDDIRVNFA"
     gene            2119..3267
                     /locus_tag="QF480_06495"
     CDS             2119..3267
                     /locus_tag="QF480_06495"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019541219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HJN06246.1"
                     /translation="MTRLSRELKDKGVDVITLSLGEPDFDTPQIIKDAGKKAIDDNIT
                     HYPPVPGFMELREAIAQKLKRDNNLDYKPSQIVVSTGAKHSLINVFMCILNEGDEVSI
                     PAPYWVSYPEMVKLSGGKPVIIDAGIDSDFKVKPEDVEAAITKRTKAFLFNSPSNPTG
                     SVYAREELEELARVFAKYPDILIVADEIYEYINFSGKHESLASFDEIKDQVVIVNGVS
                     KGMAMTGWRIGYIAGPQFIADACTKIQGQYTSGTGTISQMAAMEAVKTVPETSTELKN
                     MVEAFKERRDLLIDLFRSIPGVKINIPSGAFYLFPNVSSYFGKSYGEYTIHSSTDLCM
                     YLLNQAHVALVPGEAFGNPNCIRISYATSKELITEAVSRIKLALDRLT"
BASE COUNT         1045 a          559 c          581 g         1194 t
ORIGIN      
        1 actttgagta cttgttcaat aatatctcgt acacaccctt taccaccgtt tttgtcagaa
       61 atatacaagc taatgctttt aatttcttga actgcatctg ccgggcaaac cggtacccca
      121 accatcttca taactatgta atcgggaatg tcatcgccca tatatacaat atgctcagga
      181 ttaatatttt tctttttaat gtaatcatta aaaatcacca ctttatcttt tattcctaag
      241 aacacatcag tgatatttaa tgctccaaat ctgttctcaa ctgattgtga aaatcctcca
      301 gaaatgatta ccacattata acccagttta atagcaagtt gtaatacata gccatctttt
      361 acatttgccg atcgtaatgg gtttccttcg tgttgtagga taagtgcgcc gtcggtcata
      421 acaccgtcat aatcaaatat aaaggttgtt actttcttaa gtttttcttt ataattagcc
      481 atgatgttta ttaataattt gtcttgttag aagattgtat atttctttgt attcggaata
      541 tttatccaaa agttccagat gtttgttgat agtacttatt tcttttctaa gggcaggtcc
      601 agtttgagcc tgataaggat taacatcccg tattttaaca gctgtttctt ttataagtgg
      661 atgcaaaaga gaaaagtcaa tgtccttttc attaagtaca tcgtgggcca aattgtacag
      721 taagtttgag aagttattaa cagtaacagc tgttagatga agatattgac gtttctcaga
      781 atttagtaag accacgttgt tgctaatttt ctttgctagc tgaacgagta gctctgaagt
      841 tatatcattt gatccttcta tgcagatggg tacctcctga aaatctactt gttttccttt
      901 tgtgaacgtc tgcaaaggat aaaatactcc gtaatgatga aatttacctt caaaaacgtc
      961 agaaggttga ctacccgaag tatggaccat gattccttct ttacttttaa gttttgttat
     1021 tacattacta atttcattat ctggtattgc tatgatatac agatctgata tagtatttag
     1081 tttctcaata ttttcaacgt aattacaacc aactttttct gctaataatt ttgagttgtc
     1141 gatgtttgga gagaacacct ccaataccct aatcccgtta cttgaaatca cttcgcctag
     1201 ggcagttgca acattcccag aacctataat actaacagtt aatatttggt tagttgtgtt
     1261 caattttagg caaaatttac tcttatatca tctttcagtg cgctaattgc actatcaata
     1321 ggattgtgtt tagtgttaaa tccgtgtgtt ataatctctt gtgcaaactt atttgcgtca
     1381 tcatcagagt taaattttgt agcagcagaa tttaccaatc ttacaacgtc ttctttcgct
     1441 gctttaacta gttcccatgc tgtatcagat acataaagtt gttgcgacaa attatgctca
     1501 tattcttccc tgattgttgt aagtaatgac gaatgtaata ccttgacatt agcattaggt
     1561 ttcaaaactc gtgttattaa atttggcgga ttgatccttt ccaaaaatag agacattctc
     1621 tcgtaagctt taaatcttaa cggcattgag gtcttgctgt tatttgattt cttttcattt
     1681 tccatcttta ccttaagtaa tctctgttcc tcttttagga aatcaaattg ctttgaattt
     1741 tgtcgtgtaa attcacgcat cataatataa acaacaataa gtactgctat tgtggggata
     1801 attattttaa gaaactcaat catttcactc atattacttt gattaaaata tcacagttac
     1861 aaaataacaa ctaattttca cgctaagctg taaataatta cttattcctt attcctgagt
     1921 atcaattttt tgtattgact ttaactaatg caaaatttag catgtttgtt taaagtgctt
     1981 cattagcaaa taattttata ttcttcagct ttaaattctg ctttttgtta ttatatttgc
     2041 tccttaaaaa ttataaaagt ggataaaagt atattatcag acaggatact aaatctctcg
     2101 gtgtcagcaa ctttagaaat gacgaggtta agtcgtgagc tcaaagacaa gggagttgac
     2161 gttataacgt tgagtttagg cgaacccgat tttgatacac ctcaaataat aaaagatgcc
     2221 gggaaaaagg ctattgatga taatatcact cattatcctc cggttcctgg ttttatggaa
     2281 cttagagagg ctattgcaca aaaattaaag cgagacaata atttagatta caaaccaagt
     2341 cagattgtcg tttcaacagg agccaagcac tcacttataa atgtattcat gtgtattctc
     2401 aatgagggtg atgaagttag cattccggct ccttattggg tttcatatcc tgaaatggta
     2461 aaactttcag gtgggaaacc agttattata gatgctggaa ttgatagtga ttttaaagtt
     2521 aaaccagagg atgtggaagc agctattaca aagagaacaa aagctttttt gtttaattct
     2581 ccgagcaatc caactggatc ggtttatgca agggaagagc ttgaagaact ggcaagagtt
     2641 tttgcaaagt atcctgatat tttgattgta gcagatgaga tttatgaata cattaacttc
     2701 agtggaaagc atgaaagttt ggcttctttt gatgaaatta aagaccaggt tgttattgta
     2761 aatggtgttt caaaaggaat ggcaatgaca ggttggagaa ttggttatat agcaggacct
     2821 cagttcatag ctgatgcatg cacaaagata cagggacaat atacgtctgg tactggaact
     2881 atctcacaga tggcagctat ggaagctgta aaaactgtac ccgaaacttc tacggagtta
     2941 aaaaacatgg tagaggcatt taaagaaagg cgagatttat tgattgattt atttagatct
     3001 attcctggag ttaaaataaa tatccctagt ggtgcctttt acctttttcc taacgtaagt
     3061 tcttattttg gtaaatctta tggagaatat acaatacata gcagcactga tttgtgtatg
     3121 tatttactta atcaggctca tgtggcactt gtaccaggag aggcatttgg taacccaaat
     3181 tgtattagaa tatcttatgc cacatcaaaa gagcttataa cagaagcagt tagtagaatt
     3241 aaacttgctc tagacagact tacctaattt gaaatgagat tgtttgatat ttcgattaga
     3301 taaattccac aatttcttca agagattttc ttattttatt atctctctta tggtaaccat
     3361 catttgggta gcctaaggg
//
LOCUS       DASCQP010000380         9337 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001419213, whole genome shotgun sequence.
ACCESSION   DASCQP010000380 DASCQP010000000
VERSION     DASCQP010000380.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 9337)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9337)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9337
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001419213"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            206..1855
                     /locus_tag="QF480_06500"
     CDS             206..1855
                     /locus_tag="QF480_06500"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HJN06247.1"
                     /translation="MDNKQRTEQAPEAESMLLKKRILKLESELAAVKLINSLPATSNN
                     LYNDILDNIPLAILSLDTNGYMQLANMSFIKLFDFDKLKLNAKIHINKFNPFQGTALN
                     KKINKLLDNQLQFDHEFKLEDFGNKESRFRSRGITILSSDDEVVSYMIIIGDITKRKI
                     AENNLIKAKEKAEESNMLKTAFLSNLSHEIRTPLNHILGFLELLLVDDNSFEERKEYS
                     TIVRDSSDVLLKRIDDIIDISKIETGQMDIRKEKVNVIELLVDVYEDCKNFELKYNRE
                     DVDLLLNKQHDYTDVVILTDPVKLRQIIFNFVDNAFIFTTKGKIEIGFTIKDKNGVCF
                     YVKDTGIGIDIKHHESIFEHFRQVDNSSTRKVGGSGLGLAISRGLAQLLNGNISMQSK
                     PGIGSVFNLSLPESIISLETKSINYTSSDPVYDWQNSTILIGEYEEVDYNLLKVILAK
                     TKAKLLRAKTGDEAIRLYTENKPDLILINFDLPVVNGEEFAKIIKSKNSMIPIIAQID
                     FANEDDIVRAKAAGFDKLVTKPIQKSSLLNIINDLIINSWF"
     gene            2102..2650
                     /locus_tag="QF480_06505"
     CDS             2102..2650
                     /locus_tag="QF480_06505"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HJN06248.1"
                     /translation="MQFDSAFIDRLKENDSKAQRVFYQQLAPKMYGICLRFALISEDA
                     DDILQDGFIRVFKHIGDFRGEGSLEGWVRRTIVNTAINYYKKKIKQGINTDLEYVKGK
                     VKETNNIVEKMAADELLELINELPPGYRMVFNLNVIEGYTHKEIGQMLEISENTSKSQ
                     LSRARISLQKKIFSIRDKENLG"
     gene            2643..3983
                     /locus_tag="QF480_06510"
     CDS             2643..3983
                     /locus_tag="QF480_06510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06249.1"
                     /translation="MDNNNIHIDKLIKDKIEQLSPSPPDHIWTGIEKGIHVQKTNQFF
                     RRRWFIAASILILFALITSIFLFNPISFETSDDETLQITNKEESSSSKVGGLGGSSDS
                     TVGKDNNIGISDAVDTEVEKHLNADEQPSDANIPNSYVEIKPKIIPKNKSIEVSEQDL
                     QYETNNSQEIIEMKKDDLLFPSIYSNEYKPEDHNISPPLPDEPVIEQKNNLSFPRWKT
                     SYYITPELSISHFDSVEILNSYSINIEPTYFLNKNWFFRFGAGLSFVRDRGFARISYI
                     TNEYMGSYEDVYDITFDTILGNINPVFHTKSVEIWDSIPHISVSGVTNRYFYLQVPAL
                     FGYQYKKPGSVISWYFMGGPAFNLKVASWIDNPKPEDENSDIVDLQNNLPIRSDIYFQ
                     LWLGAGIEYEINKKISIAIEPGYRYNFKSIYNNPYNHTSSSGFTLRVGLVYLMK"
     gene            4028..5599
                     /locus_tag="QF480_06515"
     CDS             4028..5599
                     /locus_tag="QF480_06515"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PKD domain-containing protein"
                     /protein_id="HJN06250.1"
                     /translation="MKLNLINKHNYRITSLLMLVIFVNISYSSNTINHVIISGQVTNL
                     EYGNPVEGHTIYIKSDSTQTGRSRYSKVLKTNIEGYYYDTIATTEDNGSLIIYTYDHF
                     GVSCDTTVYFRFIDRGKSVIIADFAIYLPYQAEELQARFKYFQKSGRDRNQFKFIDQT
                     NHKYLVGWQWDFGDGTTSNLQNPTHSYQSYGLFKIKFTVTAIVNNIPIKSTITKQLYI
                     GETEYYHLGGHVFSEYFPIDDGRAYLYMIDSLNRYTSIDTMTFDTLGYYYFFHIPKGD
                     YVVKVEPTYESEYYGKLMPTYFGDKPFWEEAETIHLKHTNWECNIKLMEPNGIFDGEG
                     GLGGKVEYINLPHSYQELFVEGVHIYLFDDSNNLLTCKYSDSSGDFSFDFIELNTYWL
                     YPEIAGVHAEKIRMELTPEIPIISDIEILIDVYGIDYIFPGGEIDSDEIVGLPYPNPV
                     SGTLSLPVYSMPGSKLAIDIFDMYGNKIFSKQVDLMTNHSNYQVSTANIKSGTYIIRA
                     VVNEKTYNKVFIVAR"
     gene            6169..6507
                     /gene="rbfA"
                     /locus_tag="QF480_06520"
     CDS             6169..6507
                     /gene="rbfA"
                     /locus_tag="QF480_06520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007135025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HJN06251.1"
                     /translation="METIRQERINILLQKDLGEIFQVELRHVSRGAMVTVTKVKVTPD
                     LSMAKVYLSLFATSDKDELLKKIRSHSKEIRGKLGSRVRNQLRIVPDLSFYIDDSLDY
                     IENIENLLNE"
     gene            6590..7420
                     /locus_tag="QF480_06525"
     CDS             6590..7420
                     /locus_tag="QF480_06525"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HJN06252.1"
                     /translation="MQYDPIKLKLGLFFNMSPILRKIFYRLLDILLLRSWYIRKEIRI
                     WEKEISGKQNILDAGSGFGQYDFYLASRNSNWNIRGLDVKQEQVDDCNAFFNKIGLNN
                     ASFDHGDLTKLNEESAYNLVICVDVMEHIEEDEIVFENFQKALVDGGMLLVSTPSDKG
                     GSDVHHEHHHSHEDGGSQSFIDEHVRDGYGVDEISEKMKKAGFSRSEVYYQYGKPGKL
                     AWKLSMKFPILMLNTSYFMFIVLPIYYLITFPFVLLLNWLDLKQLHSSGTGIVAKAWK
                     "
     gene            7758..>9337
                     /locus_tag="QF480_06530"
     CDS             7758..>9337
                     /locus_tag="QF480_06530"
                     /inference="COORDINATES: protein motif:HMM:NF013080.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LTA synthase family protein"
                     /protein_id="HJN06253.1"
                     /translation="MQKRSTSDIFKFIFLSDDVPTLLPGFIKDYWFVGIVWMIILILT
                     WIIYPKFNKNRFDEIVIADKKPFTTKPLSLKKKKVLQLVYKLIIMVVIIGLSLVGARG
                     GLQLKPLSIIDASKHVSVSQMPLVLNSVFTVMTTFGHDELTEKKYFSEKQCQEIYPVV
                     HNFENKNKELNKKNIVVLLLESFSKEYVGSLNAYKGYTPFLDSLMQHSLVIENAYANG
                     LRSIDAIPAIVIGVPSLMDDPFITSVYNTNKTNSLAIMLKEKGYYTAFFHGGTNGTMN
                     FDGFAAYAGFDDYYGRFEYNNDDDYDSYWGIYDEPFLQYFAQKLNSFEQPFFAFDFTL
                     SSHYPYNIPEKHKEKFLEGPMKIHKVVKYTDFALMKFFNTAKKMPWYTNTLFIIVADH
                     PAQSVIPSNKNDVEELGHILNNDLMSYYKNTSGRYAIPMLFYSPGDSLFTGNYSGTVQ
                     QTDIFSTILDYLNYSEPVVAFGASILNDSSHRIALQYVNGLYQITSGKYSLLFDGDFS
                     TSLYNNDEDPQHKQNLIKT"
BASE COUNT         3258 a         1411 c         1588 g         3080 t
ORIGIN      
        1 gttttctgat ttaagagaga ttttctgctt gtaattagaa gaaataatgg catggaaata
       61 ttgtaatagt tgtttaagtt ctaagcagaa actctatttc caacgtaact atttaaaatt
      121 aattaagtat tagttaataa ttataaacaa ttttatactg attaattaat ttttttatat
      181 ctttggcata acaagcaaag gaaaaatgga caataagcaa agaaccgagc aagctccgga
      241 agcagaaagt atgctcctga aaaagcgaat acttaagctt gaaagtgagt tagcagctgt
      301 taaattaata aattctttac ccgccacatc gaataattta tataacgata tactagataa
      361 tattccgctc gcaattctca gtcttgacac gaatgggtac atgcaactag ccaatatgtc
      421 gttcattaaa ctttttgatt ttgataaact gaaactcaat gccaagatcc atatcaataa
      481 gtttaatcca tttcaaggaa cagcactcaa taaaaaaata aataagctgt tagataatca
      541 gctgcagttt gaccatgaat ttaagcttga agattttggg aataaagaaa gccgttttcg
      601 ctccagagga ataacaattc tgtcttcaga tgacgaagtc gtgtcatata tgattattat
      661 aggtgatatt actaaaagga agattgctga aaacaattta ataaaagcta aagaaaaagc
      721 agaagaatca aatatgctga aaaccgcttt tttgagcaac ttatcgcatg agatcagaac
      781 acccctaaat cacattttag gctttctaga acttttattg gttgatgaca attcattcga
      841 agaacgcaaa gaatattcta ccattgtgag agatagtagt gatgttttgt taaagcgtat
      901 cgatgatata attgacattt ccaaaataga aaccggacaa atggatatcc gtaaggaaaa
      961 ggtaaatgtt attgaacttc ttgttgatgt gtatgaagat tgtaagaatt ttgaacttaa
     1021 gtataacaga gaagatgttg atttgctatt gaacaaacag catgattata cagacgttgt
     1081 aatacttacc gaccctgtaa agttacgtca gataatattt aattttgttg ataatgcttt
     1141 tatttttacc actaaaggta agattgaaat tggttttaca atcaaagaca aaaacggggt
     1201 ttgtttttat gtaaaagata ctggtattgg tattgatatt aagcatcatg aaagtatatt
     1261 cgaacatttc cgccaggttg acaattcatc gacacggaaa gtaggtggat ccggccttgg
     1321 tctagctatt tctcgcggac ttgcacagct acttaatgga aatatatcta tgcaatcaaa
     1381 accaggtatt ggttctgttt tcaatttaag tctaccagag tcaattatct cactagaaac
     1441 aaaatcaatc aattatacat catccgatcc tgtatatgat tggcaaaact ctacaatact
     1501 cattggagaa tatgaagaag tagattataa cttattaaaa gtaattttag ccaaaacaaa
     1561 ggcaaaacta ctaagggcaa aaaccggtga tgaagcaatt aggctataca ccgaaaataa
     1621 acccgattta atattgataa attttgactt accagttgtt aatggagaag agtttgcaaa
     1681 aattattaaa tcaaaaaact caatgatacc catcatagct caaatcgact ttgccaacga
     1741 agacgatatt gttagagcta aggcagcggg ttttgataaa ttagtcacta aacctattca
     1801 gaaaagcagt ttactcaaca ttattaatga tttaattatc aatagctggt tttagttgat
     1861 ataatttgtg tcctctattt gtacgtttta atattctgtc gttttcttct gattattctt
     1921 tattctgaat tacaaatctt gtacttcgtt gattctgaac ttacgctaaa aaccttaaaa
     1981 aatgcatgtt ttgtgcaacc attcattgag cgtcggtgtc atccaattta aaaattgaag
     2041 gtattttagt aacttgccgg aaaaatttag cctaccagag ttaggcaata atttatcctt
     2101 catgcaattt gatagtgcct tcatagatag gttaaaagaa aatgattcta aagcgcaaag
     2161 agttttttat caacaacttg cgccaaagat gtatggtatt tgtcttcgat ttgcattaat
     2221 tagtgaagat gccgatgata tattgcaaga tggctttatt agagtattta aacatatagg
     2281 agattttcgt ggagagggat cacttgaagg atgggtgcga cgtacaatag taaacacagc
     2341 aataaactac tataaaaaga aaattaaaca gggaatcaat acggacctag aatacgtaaa
     2401 aggaaaagtt aaagaaacaa ataatattgt tgagaaaatg gctgccgacg aacttctcga
     2461 actgataaat gaattaccac ccggatatcg tatggtcttt aatttaaatg tcattgaagg
     2521 atatacacat aaggagatag gccaaatgct tgagatttcc gaaaatactt caaaatcaca
     2581 actttcaaga gctcgtattt cattacaaaa gaaaatattt tctattagag ataaagaaaa
     2641 ccttggataa caataatata catatcgata aacttataaa agataagatt gaacaattat
     2701 ctccttctcc tcctgatcat atttggacag gaatagagaa aggcattcat gtgcaaaaaa
     2761 ctaatcaatt ttttaggaga cgatggttta ttgcagcttc aatattaatt ttatttgctt
     2821 taattacgtc aatatttttg tttaatccaa tatcatttga aacatccgac gacgaaactc
     2881 ttcaaattac aaataaggag gaaagcagct cttcaaaagt tggtggactc ggaggttctt
     2941 cagactctac tgtgggaaag gataataaca ttggcatttc agatgcagtt gatactgaag
     3001 tagaaaaaca tctaaatgct gacgaacaac catcagatgc aaatattcca aattcgtatg
     3061 ttgagataaa gccgaaaatt attccgaaaa ataaatcaat tgaggttagc gaacaagatc
     3121 ttcaatatga aaccaacaat agccaagaga ttattgaaat gaaaaaggat gatttattat
     3181 ttcctagtat ctatagtaat gaatataaac cagaagatca taatatatca cccccattgc
     3241 cagatgaacc agtgattgaa caaaaaaata atctctcttt tccacgatgg aaaacaagct
     3301 attatataac tcctgaatta tcaatttccc atttcgattc tgttgagata cttaattcat
     3361 atagtataaa tattgaacca acatactttc tgaataaaaa ttggtttttt cgttttggtg
     3421 caggtttgtc attcgttcgc gacagaggtt ttgccagaat aagctacatt acaaacgaat
     3481 acatgggctc ttacgaagat gtttatgata ttacttttga tactattcta ggaaatatta
     3541 atcctgtttt tcacacaaaa tcagttgaaa tttgggattc tatacctcat atttcagtat
     3601 cgggagttac caacagatac ttttacttac aagtcccagc attatttggc taccaataca
     3661 aaaaaccggg atcggtaatt agctggtatt ttatgggagg tcctgctttt aatttgaaag
     3721 ttgcaagttg gatcgataat cctaaacctg aggatgaaaa ttctgatatt gtagacttgc
     3781 aaaataattt gcccatacga tcagatatct acttccagtt atggcttggt gcaggtatag
     3841 aatatgaaat aaataaaaaa atatcaattg ctattgaacc cggttacaga tataatttta
     3901 aaagcattta caataatcca tacaatcaca catcttcatc agggtttacc ttgagagttg
     3961 gtttagtata tttaatgaag tagagcatga atgatttggg attaataaat caataaaata
     4021 ttgaagaatg aaattgaatt taattaataa gcataattac agaattacat cattactcat
     4081 gttagtaata tttgtgaata tctcatattc atcaaatact attaaccatg ttattatttc
     4141 tggccaggtt acaaacctgg aatatggtaa cccggttgaa ggacacacga tttatataaa
     4201 aagcgattcc actcaaaccg gacgtagtcg ttatagcaag gttttgaaaa ctaatattga
     4261 aggttactac tatgatacta ttgcaacaac cgaagataat ggatcgttaa tcatttatac
     4321 ttacgatcat tttggagttt cttgtgatac aactgtctat tttcgattta tcgatagagg
     4381 caaaagtgta attattgcag attttgcaat ttatcttcca tatcaagccg aggagcttca
     4441 ggcaagattt aaatattttc aaaaatcggg tagagataga aatcaattca aatttataga
     4501 tcaaacaaat cataagtatt tagttggctg gcaatgggat tttggagatg gtacaacctc
     4561 caatcttcaa aatccaacac attcatatca atcgtacgga ctttttaaaa tcaagtttac
     4621 tgttacagca atagttaaca atataccaat aaaaagcaca attacaaagc aattgtatat
     4681 aggcgaaacg gaatattacc atttaggggg tcatgtattt tcagagtatt tcccgattga
     4741 tgatggtcgt gcttatttat acatgatcga ttcgttaaac cgatatacaa gtatcgacac
     4801 tatgactttt gacactttag gatattatta tttttttcat attccaaagg gtgattacgt
     4861 tgtaaaagtt gaacccacct acgaatcaga atattatgga aaactaatgc cgacatattt
     4921 cggcgacaaa cctttttggg aagaggctga aacaatacat ttaaaacata cgaactggga
     4981 atgtaacatc aaacttatgg aaccgaacgg tatatttgat ggagaaggtg gtttgggcgg
     5041 caaggttgaa tatataaact tacctcattc atatcaggag ttatttgtag aaggagtaca
     5101 tatatacctg tttgatgact caaataactt gttaacctgt aagtattcag atagtagtgg
     5161 agattttagt tttgacttta tagaattaaa tacttattgg ctttatcctg aaatagcagg
     5221 tgtacatgct gagaaaataa ggatggaact tacccccgaa ataccaatta ttagtgacat
     5281 tgaaatactt attgatgttt atggcattga ttacatattt ccaggaggag aaatagattc
     5341 tgatgagatt gtgggattac catacccaaa tcctgtatcc ggaactctta gtcttccagt
     5401 ttactcaatg ccgggaagta aattagcaat agatattttt gatatgtatg ggaataaaat
     5461 cttttctaaa caggttgatt taatgactaa tcatagcaac tatcaggtat caacagcaaa
     5521 cattaaatcc ggcacttata ttatacgtgc agtcgtgaat gaaaaaacct ataacaaggt
     5581 tttcattgta gcaaggtaaa ttttagtgaa ctagtggtag tcaattaaca actacccatc
     5641 attaggtgtt tcatcaacat gttgcgaaag ataatctccc aatattttga tcatattgct
     5701 ttcaatttca gctattcgtt caatttcaaa agctggtaag ctctcctctg agattgtatc
     5761 aaaatattgc ctctgtctta accattatgt ttttcatttc agtcataaca gttgtaaact
     5821 tcttgtttac ggtgaactta aacgaagtac gtaagtagtg tttaaaaata gtaactattt
     5881 ctccggaact cacacctaca gggattttat tattgctctt attcaatcac actaactaca
     5941 aatttataaa accgtattat taatttatca gtgttattta ttgtgaattt tattggcgat
     6001 ggtatacaat cgttttatgg gtaattagtt ttgcagtaaa ggtagtaaag tttgatagct
     6061 aattactact caaattcatc aataataatt atccttcaca agaaatggta taacattctt
     6121 ttttgtacaa cttaatatgt ttcattgata attaaatact tttgcagaat ggaaacaata
     6181 cgtcaggaaa gaataaacat tttattacaa aaggatttgg gcgaaatatt tcaggttgaa
     6241 ttaagacatg tgtcacgagg tgcaatggta actgttacga aagttaaagt tactcctgat
     6301 ttatccatgg cgaaagtata cctgagcctt tttgctacat ctgacaaaga tgaactccta
     6361 aaaaaaatcc gcagtcactc gaaagaaata agaggaaaac tgggttccag ggttcgcaac
     6421 caactacgta ttgtccctga tttgagtttc tatattgacg actctctgga ctacattgaa
     6481 aatattgaaa atctactaaa tgaataatta aatgttctcg tggttgaata taaatatact
     6541 taatcaagta ttcatgcaat cgctcattta atcattcaat aatactaata tgcaatacga
     6601 tccaataaaa ctaaaacttg gcttattctt taatatgtca cctatactcc gtaagatttt
     6661 ttatcggctg ctagacatat tgttacttcg ctcttggtat attagaaaag aaataagaat
     6721 atgggagaaa gagatatcag gaaaacaaaa catacttgat gccggttctg gatttggtca
     6781 gtacgatttt tatcttgcat ctagaaatag caattggaat ataagaggat tagatgttaa
     6841 acaagaacaa gtcgacgatt gtaatgcgtt tttcaacaaa ataggattga ataacgcttc
     6901 atttgatcat ggagatttaa caaagttaaa tgaagaaagt gcatataatt tggtaatatg
     6961 tgttgatgtg atggagcata ttgaagagga tgaaattgtt tttgagaact tccagaaagc
     7021 attagtagat ggtggtatgc tattagtatc aactccatca gataaaggag gttctgatgt
     7081 tcatcatgaa caccaccact cacatgaaga tggtggtagt cagtcattta ttgatgaaca
     7141 tgtacgagat ggatatggcg ttgatgaaat ttctgaaaag atgaaaaagg caggattctc
     7201 acgcagtgaa gtttattacc agtacggtaa accaggcaaa ctagcctgga aactaagcat
     7261 gaaatttcca atacttatgc tgaatacctc ttattttatg ttcattgttc ttcctattta
     7321 ctatctaata acatttcctt ttgtactact gttaaactgg ttagatttga agcagttaca
     7381 cagtagcgga accggtattg tggcaaaagc ctggaaataa tatgcattct tatatttata
     7441 atataatact gcttattaaa aggttacttt tagctttatt cctttttttt ataggcagac
     7501 ttttctttta catctataat ttcgggttgt ttgctgatat tgaattttgg caactagcaa
     7561 aaatattttt tgttggaatt agattcgatg tttctgtgtt atgctatttt aacctattgt
     7621 ttatactggt tcatataatt ccaataggta gatttattgc acttcgaccg atacaattat
     7681 ttctgaagat atatttcatt gtcattaata gtattcttct atttagtaat cttagtgatt
     7741 ctatttattt tcattttgtg caaaaaaggt caacatcgga tatttttaaa tttatttttc
     7801 ttagtgatga tgtacctact ttgcttcctg gttttataaa agattattgg tttgtaggaa
     7861 ttgtgtggat gataatatta attcttactt ggattatcta cccaaaattc aataaaaata
     7921 gatttgatga aattgttatt gctgacaaga agccttttac gacaaagcct ctgtcgttaa
     7981 aaaagaaaaa agtattacag ttagtttata agttaattat aatggtagtg attatcggct
     8041 tgtcgttagt tggagcccgt ggcggacttc agctaaaacc attatcaata attgatgcgt
     8101 caaaacatgt aagtgtttcg caaatgccat tggtgcttaa ttctgttttc acggtaatga
     8161 caacattcgg acatgatgaa ctaactgaaa agaaatattt tagcgaaaaa caatgccaag
     8221 aaatatatcc tgttgtacac aattttgaga acaagaataa ggagttaaat aagaaaaata
     8281 tagttgtact tcttttagaa agcttttcta aagaatatgt tggttcttta aatgcataca
     8341 aaggctacac tccatttctc gactctctga tgcaacattc tttagtaata gaaaatgcgt
     8401 atgcaaatgg tttaagatca attgatgcta taccggctat tgtaattggg gttccatcct
     8461 taatggatga tccttttatt acatctgttt acaatacaaa caaaactaac agcctcgcaa
     8521 ttatgcttaa ggaaaaaggt tattacactg ctttttttca tggtggtact aatggaacaa
     8581 tgaatttcga tggatttgct gcttatgccg gatttgatga ttattatgga cgttttgaat
     8641 ataataacga tgatgattac gatagctatt ggggaatata tgatgaacct tttttacaat
     8701 attttgctca gaaattaaac tcatttgagc aaccattttt tgcttttgat tttacgctta
     8761 gctcacatta tccttacaac attcctgaaa agcataaaga aaaatttctt gaaggtccca
     8821 tgaaaattca taaagtagta aaatatactg attttgcctt gatgaagttt ttcaacactg
     8881 caaaaaaaat gccttggtat actaacactt tatttataat tgttgccgac catcctgctc
     8941 aatcagtaat tccttcaaat aaaaatgatg ttgaagaatt aggacatata ttgaacaatg
     9001 atttaatgag ctattacaaa aacacgtcag ggcgttatgc tattccaatg ttgttttata
     9061 gccctggcga cagtttgttt acaggtaatt acagtggaac agttcaacaa acagacattt
     9121 tttcaaccat acttgattat ctgaattaca gtgaaccagt tgttgctttc ggagcaagca
     9181 ttctaaatga tagctcgcat cgaattgcgt tacaatatgt taacggactc tatcaaataa
     9241 cttcgggaaa gtacagcctt cttttcgatg gcgattttag tacatcattg tataataatg
     9301 atgaagaccc acagcataag caaaacctta ttaaaac
//
LOCUS       DASCQP010000381         2581 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001419829, whole genome shotgun sequence.
ACCESSION   DASCQP010000381 DASCQP010000000
VERSION     DASCQP010000381.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2581)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2581)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2581
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001419829"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..275
                     /locus_tag="QF480_06535"
     CDS             <1..275
                     /locus_tag="QF480_06535"
                     /inference="COORDINATES: protein motif:HMM:NF014626.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006974 - DNA damage response [Evidence
                     IEA];
                     GO_process: GO:0018142 - protein-DNA covalent
                     cross-linking [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="SOS response-associated peptidase family
                     protein"
                     /protein_id="HJN06254.1"
                     /translation="IWETWKDAENKIINSFSIITTEPNSLSKDIHNRMPVILKPEDEQ
                     SWLSENNEELLKKLLVPFDPNKMAAYAISKEVNSPKNNKPGIIIPV"
     gene            complement(331..1323)
                     /locus_tag="QF480_06540"
     CDS             complement(331..1323)
                     /locus_tag="QF480_06540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HJN06255.1"
                     /translation="MPEIKSVENRIFNINGPDDFNEIALEIFHFQYKYNFVYKQFVDF
                     LKIQTSHIKHYSQIPFLPVEFFKNHKVTSGDFKAEMIFTSSGTSGRQTSEHYIMKIKL
                     YELAFVKTFELFFGSPGNYVILALLPSYLERSGSSLVYMTNKLIGLTNRTESGFYLSE
                     FAELHSLLVTLKRQKQKVLLLGVTYALLDLAEQFPIHFPELVLMETGGMKGNRQEIVR
                     TELHAKLKNEFGVQQIYSEYGMTELLSQAYSLSNGIFESPPWMKLIIRDVNDPLSILS
                     SGKIGGINIIDLANIYSCSFIATQDLGKIDSSGSFEILGRFDNSDVRGCNLMVV"
     gene            1359..1901
                     /locus_tag="QF480_06545"
     CDS             1359..1901
                     /locus_tag="QF480_06545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06256.1"
                     /translation="MNNITKILILVLIVGTVVLSCRKFEDFPDIPAITYDNFVVLMNT
                     QTGITERGVLVFSYTDGNGDLGLDKGDTLPPFNRKSEYYYNLIIKYFEKQNGVFVEVP
                     LLSWNADSSNYDTLTFNSRFPILTPESGNQAIKGVFEDTLFIYNPLSDFDTIKFKAYI
                     YDRALNKSNEIETSEIVRVQ"
     gene            2062..>2581
                     /locus_tag="QF480_06550"
     CDS             2062..>2581
                     /locus_tag="QF480_06550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06257.1"
                     /translation="MKKIYTFLLLIAMSGAVFAQTFITEDFSSGTMPPAGWTIDNLNA
                     QWSSSATANAEGTAPEAMFTWKQVIDASHLISPAIDLTGYQSVVLRFKHYLDNYGGGN
                     YAIGAATRSGGGDWNSVWEVSPTGHIGPEDLLITVDNDDVGQSDFQFCFYLDGNLYNM
                     NYWYIDDISLFNP"
BASE COUNT          872 a          445 c          428 g          836 t
ORIGIN      
        1 gtatatggga gacatggaaa gatgcagaaa ataagataat taactccttt tcaataataa
       61 caactgaacc aaattcctta agtaaagata ttcataacag aatgcctgtt attcttaaac
      121 ctgaggatga acaaagctgg ttatcagaaa acaatgagga attgcttaaa aaattactag
      181 tgccttttga tccaaacaaa atggcagctt atgctatttc aaaagaagta aactcaccta
      241 agaataacaa acctggaata attataccag tataagtaat gaattagtga gtgaaatatt
      301 tatttcagta ttccacctac ttgctcctac ctacaccacc attaagttac aaccccttac
      361 atcgctgtta tcgaaacgtc caagtatctc aaaagaacct gatgaatcta tcttaccaag
      421 atcctgagtt gcaataaacg agcaagaata aatatttgct agatcaataa tgttgattcc
      481 accaattttg ccagatgaaa gtatacttaa tggatcgtta acatcgcgaa taattaattt
      541 catccaaggt ggggattcga aaataccatt acttaatgaa taagcttgcg acaaaagttc
      601 agtcatacca tattcagaat aaatctgctg aactccaaat tcatttttaa gtttagcatg
      661 aagttcagta cgtactattt cttgcctatt gcctttcatt cctccagttt ccatcaacac
      721 taattcaggg aaatgtatgg ggaattgctc tgccaaatcc aataatgcgt atgtaactcc
      781 taataatagt accttttgct tttgtctttt taacgtaaca agtaatgaat gaagttctgc
      841 gaattcgctt aaataaaatc cactttctgt cctattggtc aatccaatta gcttgttagt
      901 catataaact aatgacgacc cggatctttc aaggtatgac ggaagtaatg caagaataac
      961 atagttgcca ggtgaaccaa aaaaaagttc aaaggtcttt acaaatgcta attcatataa
     1021 tttaattttc ataatataat gctcgcttgt ctgcctacct gatgtaccac tgctcgtaaa
     1081 aatcatttcc gctttaaaat ctcctgaggt aactttatga ttcttaaaaa actcaacagg
     1141 aagaaatggg atttgtgaat aatgctttat gtgtgaagtc tgaattttga gaaaatcaac
     1201 aaattgcttg taaacaaagt tgtatttata ttgaaaatga aatatttcaa gagctatttc
     1261 gttaaaatca tcaggaccat tgatattaaa gattctgttt tctacagact tgatttctgg
     1321 catgattttt atacttttat gctcttgtat aataactaat gaataacatt acaaaaatac
     1381 taattcttgt actgattgtt gggacagtag tgctttcatg ccgtaagttt gaagatttcc
     1441 ctgatatccc agcaataact tatgataatt ttgttgtact aatgaatacg caaacaggta
     1501 ttaccgagcg aggtgttctt gtgttttctt atacagatgg taatggtgac ctgggcctag
     1561 ataaaggtga caccttaccg ccattcaaca gaaaaagtga atactattat aatttgatta
     1621 ttaaatattt tgaaaaacag aatggggtat ttgtagaggt tcccttactg tcatggaatg
     1681 ccgattcatc caattatgac actttaacat ttaattccag attcccaata ctaactcccg
     1741 aaagtggcaa tcaggcaatt aagggtgttt ttgaagatac tctatttatt tacaatccct
     1801 tatcagattt tgatacgata aaattcaaag catatattta cgatcgtgcc ttaaacaaaa
     1861 gtaacgaaat tgaaacttcc gaaattgtga gggtgcaata ggtgatacca agaaatatca
     1921 aatcctcaat tatcaataat tgaaaacttt ttaaagcgca aaatatagaa ttagtttatc
     1981 tttgtcatac caatgataac tattcaatag tttgatagtt aagttgtctc gtattttatt
     2041 aactaaatta attattgccg tatgaaaaaa atctacactt ttctattact tattgctatg
     2101 tctggtgctg tttttgcgca aacatttatc accgaagact ttagtagtgg aactatgccc
     2161 cctgcaggtt ggactattga caaccttaac gcccaatgga gttcaagtgc tacggctaat
     2221 gctgaaggta cagcacccga agctatgttt acttggaaac aagttattga tgcatcacac
     2281 ttaatatctc cagcaattga cctaaccggt tatcaatccg ttgtactacg atttaaacat
     2341 tatctcgaca attatggagg tggcaattat gctattggag ctgctaccag atctggtgga
     2401 ggtgactgga atagtgtatg ggaagtaagt ccaactggtc atattggccc tgaagattta
     2461 ctaattacgg tagacaatga tgatgttgga cagagcgatt ttcagttttg tttctaccta
     2521 gatggaaacc tgtacaacat gaattattgg tacattgatg acatttcatt attcaatcca
     2581 g
//
LOCUS       DASCQP010000382         2349 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001425744, whole genome shotgun sequence.
ACCESSION   DASCQP010000382 DASCQP010000000
VERSION     DASCQP010000382.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2349)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2349)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2349
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001425744"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..804
                     /locus_tag="QF480_06555"
     CDS             <1..804
                     /locus_tag="QF480_06555"
                     /inference="COORDINATES: protein motif:HMM:NF015297.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA ester lyase"
                     /protein_id="HJN06258.1"
                     /translation="GLILDLEDAVTPSKKYEARFLVRNALRSLNFYGAERMVRINQLP
                     DGLNDLEFVIPHCVNLVLVPKCESDDDLIQVNNKIDELKKKHKVNNDVWLMPIIESAK
                     GVMNAYKIAEAANNVAAIAIGLEDYTADIGTSRTFAGNESFFARSMIVTAAIAAGIQP
                     IDSVFSDISDLEGLAENVRTSKSLGFVGMGCIHPRQIAIIHENFAPLDKEIEKAKKIV
                     LAFNDAKEKGLGVVSLGSKMIDAPVVLRAQNTINLAIDTGKLNEDWPNN"
     gene            847..2283
                     /locus_tag="QF480_06560"
     CDS             847..2283
                     /locus_tag="QF480_06560"
                     /inference="COORDINATES: protein motif:HMM:NF016138.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_component: GO:0009346 - ATP-independent citrate lyase
                     complex [Evidence IEA];
                     GO_function: GO:0008814 - citrate CoA-transferase activity
                     [Evidence IEA];
                     GO_process: GO:0006084 - acetyl-CoA metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citrate lyase subunit alpha"
                     /protein_id="HJN06259.1"
                     /translation="MKKYDKLVKNAVGRIVPSIINGEEHIPFKGVGKHRPTGRRYGSK
                     ISSCADYPDDGNKQVESLKAALIKAGLQDGMTISTHHHFRNGDIIANQIFDIAHELRI
                     KNLRWFPSASFPCQEHLIPYLEDGTINHIEGSMNGPLGKFASEGKMKGLGVLRSHGGR
                     YQAIQDGEVKIDIAVIAAPTADNFGNANGVNGEAACGLLGFALGDSQYADKVIVVTDN
                     LVPFPCIPWQIHGNYVDYVVVVDKVGIAEKIISGTTRVTKSPDRLLIAEMTAEFCEKA
                     GLIYDGFSYQAGAGGTALSIGNYFGDLLRRNNWKARFIRAGSNQYPVELLEEGLVEYI
                     LDGQTFDLEGVRSMRENSNHVNTSPFTSYNYHSKGNFASMVDIVVLGATEVDINFNAN
                     VVTHSDGYLLHGIGGWQNCLAAKTTILPIPLFRDRIPVIRDEVTTICAPGELIDVIVT
                     ERGIAINPLRKDLIEKTADSGLQIKTIQ"
BASE COUNT          794 a          370 c          501 g          684 t
ORIGIN      
        1 ggtctaatac ttgatttaga ggatgctgtc acaccaagta aaaaatatga ggcacgattc
       61 cttgtcagaa atgcactgcg tagtcttaac ttttatggag ccgaacgcat ggtacggatt
      121 aaccaattac ctgatgggct gaatgatctt gagtttgtaa ttccacattg cgtgaattta
      181 gtactagttc caaagtgtga aagtgacgat gatcttattc aggttaataa taagatagat
      241 gagttgaaaa agaaacacaa agtaaataat gatgtttggt taatgccaat tattgaaagt
      301 gctaaaggtg ttatgaatgc atataagatt gcagaagctg ctaataatgt ggctgctata
      361 gcaataggat tggaagatta tactgcagat attggcacaa gtaggacatt tgccggaaac
      421 gaatctttct ttgccagaag catgattgtt acagcagcaa tagctgcagg tattcaacct
      481 attgattctg tattttctga tatatcagac cttgaaggtt tagcagaaaa tgttcgaact
      541 tctaaaagtt taggttttgt tggaatggga tgcatccacc caagacaaat agctattatt
      601 catgaaaatt ttgctcccct cgataaagaa attgaaaaag ctaaaaagat tgtattggct
      661 tttaatgatg caaaggaaaa aggtctggga gtagtatcac ttggttcaaa aatgatagat
      721 gcaccagtag tactacgagc acaaaatacc attaatcttg caatagatac tggaaaactt
      781 aatgaagact ggccaaataa ttaaattggt tcaatgtcga tgataatccc aatgaattaa
      841 aataacatga agaaatacga taaactcgtt aaaaatgcag ttggcagaat agtaccaagt
      901 attattaacg gagaagaaca tataccattt aaaggtgttg gaaaacatag acctacagga
      961 cgtcgttatg gttcaaaaat ttccagttgc gctgattatc ctgatgatgg caacaaacaa
     1021 gttgaatcac taaaagccgc tttaataaaa gctggtttgc aggatggtat gacaatatca
     1081 acacatcacc actttcgtaa tggagatatt atcgcgaacc aaatattcga tattgcccat
     1141 gaactacgga ttaaaaactt aagatggttt ccttctgcat catttccttg tcaggaacac
     1201 cttattcctt accttgaaga cggaacaata aatcatattg aaggaagtat gaatggccca
     1261 ttgggtaaat ttgcttctga aggtaaaatg aaaggccttg gtgtgttacg atcacatgga
     1321 ggcagatatc aggcaattca ggatggagaa gtaaagattg atattgctgt tattgcagcc
     1381 ccaacagctg ataactttgg aaatgcaaac ggagttaatg gagaagcagc ctgtggttta
     1441 ttagggttcg cccttggtga ctcacaatat gctgacaaag ttattgtagt tactgataat
     1501 cttgtaccat tcccttgcat accatggcag attcatggga actatgttga ttatgttgtg
     1561 gtagttgata aagttggtat tgctgaaaag ataatatcag gaactactag agtaacaaaa
     1621 agtcccgaca gattgttgat cgcagagatg acagctgaat tttgcgaaaa agcaggattg
     1681 atttatgacg gcttttccta ccaggcaggt gccggtggaa cagcattatc aataggaaat
     1741 tattttggag atctactgag aagaaataac tggaaagccc gtttcatccg tgcaggtagc
     1801 aaccaatatc cggttgaact acttgaagaa ggtttggttg aatacatatt ggatggtcaa
     1861 acctttgatc ttgaaggtgt acgatcaatg cgcgagaatt caaaccatgt gaacacatcg
     1921 ccttttacgt cttataatta tcatagcaag ggcaactttg cttcaatggt tgacatagta
     1981 gtgttaggag ctactgaagt tgatattaat tttaatgcaa atgtagtaac acattccgac
     2041 ggatatttgc ttcatggaat tggaggatgg caaaattgct tagctgcaaa aactactatt
     2101 ctgcctattc ctttgtttcg agatcgcatc cctgtaatcc gtgatgaagt aaccactatt
     2161 tgtgctccag gtgaattaat tgacgttata gtaactgaac gcggtatagc aattaatccg
     2221 ttaagaaaag atttaattga aaaaactgct gattcaggat tacaaataaa aactattcaa
     2281 taacgaaaag aagaagcaga agctatttgt ggtgtgcctg agaaaggaga tcttagtgat
     2341 gaaataatt
//
LOCUS       DASCQP010000383         1687 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001428120, whole genome shotgun sequence.
ACCESSION   DASCQP010000383 DASCQP010000000
VERSION     DASCQP010000383.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1687)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1687)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1687
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001428120"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..409)
                     /locus_tag="QF480_06565"
     CDS             complement(<1..409)
                     /locus_tag="QF480_06565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06260.1"
                     /translation="MTKDNTMHNKINYKQINWTDGMKINKDHFIGLENYFTACDADVR
                     RIYLDEYSYGLMPLKSPKDKNLEFEAFIDDQKNLKVKVLTCRAITQAGYLIDISNGST
                     ETSNGINLNVEATLAISNMQEKEFYVVISVNPFS"
     gene            complement(427..1365)
                     /locus_tag="QF480_06570"
     CDS             complement(427..1365)
                     /locus_tag="QF480_06570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06261.1"
                     /translation="MKSYKKIAESLRSSLSDIKAEVLAGDLIDKGFDIEDILFKHLGL
                     FSRNYSKDVSDVYADMVRKVIVFQIARDGLYDVLPEGLFHPATRYSNIDTEERKHEFE
                     KQKQEEINARKFLIPIDNELFLLRVKQELELLKLIRDPLSVFKEIFPNDINIPPDFHR
                     RLISLLPFSNEIKGNIEFTSFCLSEILGKKISATSYYQNKNFNNTDSTSCSLNNNILL
                     GDNLICGSNFIEVILTWKFTIIIEDETSIPFYNDVENGIGRKLIDSFYRYFIPVEVEV
                     ETNIICNVSTTLVLEDETGSVEHRKPELYLGYNTAI"
BASE COUNT          545 a          278 c          272 g          592 t
ORIGIN      
        1 ttgaaaacgg gtttacagaa atgacaacgt aaaactcttt ttcctgcata ttagatattg
       61 ctagtgtggc ctcaacgttt agattgattc cattggaagt ttcggtactg ccatttgaaa
      121 tatcgataag atatcctgcc tgggtaatgg cacggcatgt tagcactttg actttaagat
      181 ttttctggtc atcaataaag gcttcaaatt ccaggttttt atctttcggg ctttttagag
      241 gcatcaatcc ataactgtac tcatctaaat atattcttct gacatctgca tcacaggcag
      301 taaaataatt ttcaagacca atgaaatgat ccttattaat tttcatgccg tcagtccaat
      361 ttatttgctt gtaattaatc ttattgtgca tagtattatc ttttgtcatt ttcaattaat
      421 tcattcttag attgcagtat tatacccgag gtataattcc ggttttcgat gctccactga
      481 gcctgtttcg tcttccaaaa caagggtagt gctaacatta caaataatgt ttgtttcaac
      541 ttctacttca actggaataa aatagcgata gaaactatca atcaatttcc tgccaatacc
      601 attttctaca tcattgtaga atgggatact ggtttcatct tctattataa tcgtgaactt
      661 ccaagtaaga atgacctcaa taaaattact gccgcagata agattatccc ctaatagaat
      721 attgttattt aatgaacagc tagtggaatc ggtattgttg aaatttttgt tctgataata
      781 actcgttgca gatattttct tacctaggat ctcagaaagg cagaatgaag taaattcgat
      841 atttcctttt atttcgttac taaagggtaa caacgaaatt agtcttctat gaaaatcggg
      901 agggatgtta atgtcattcg gaaaaatttc tttgaataca cttagtggat ccctgattaa
      961 tttcagtaat tcaagttctt gttttaccct gagaagaaag agttcattat cgattggtat
     1021 taagaatttt cgtgcattaa tttcttcctg cttttgcttc tcaaattcat gttttcgctc
     1081 ttcagtatcg atattgctgt acctggtagc tggatgaaac agaccttctg gtaatacatc
     1141 atataaacca tccctagcaa tttgaaatac aatgaccttt cgaaccatgt ctgcataaac
     1201 atcagaaaca tcctttgagt aattccgact gaatagacct aaatgtttga agagaatatc
     1261 ttcaatatcg aatcctttgt caattaaatc gccagcaagt acttcagcct taatatctga
     1321 caaacttgac ctgagtgatt cagctatttt tttataggac ttcattaatt ttagcaagag
     1381 ttttcagagg taaaatagca cctgaaattt taaatacctg agatagaaga agcacaaaac
     1441 aaaggcagta aattacatta tggtcctcaa agataaaaaa atagaacgga aaagcaagta
     1501 aagatcaatt taacttttat aagtataggt agtttataag atttattaat tgctgagaag
     1561 taaatatata ctgaacaatt cttctatttg tattaaagat atgtaatatc aatatgatag
     1621 cctatattta atggtttttt acaagaaaac tggaactttt attgcacagg taaattgagg
     1681 ggttttt
//
LOCUS       DASCQP010000384         2086 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001433504, whole genome shotgun sequence.
ACCESSION   DASCQP010000384 DASCQP010000000
VERSION     DASCQP010000384.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2086)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2086)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2086
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001433504"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..626)
                     /locus_tag="QF480_06575"
     CDS             complement(<1..626)
                     /locus_tag="QF480_06575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06262.1"
                     /translation="MNNIRKVLLVIISLIVIITLSHTQQEENKTKPEKIKKGWNFGAL
                     PVISFNSDLGFQYGGLINLYDYGDGSHYPKYNHSLYFEASWYTKGSGVFRFYYDSESL
                     IKGVRISTDISYIPDQTYSFYGFNGYDAVYNHAWEETNNVDYKSRVFYRQKREFFRVK
                     LDFQGDVVGKLNWLVGFNFFHIYTNSVDIKHLNKNKSEGDKLPDIPGL"
     gene            complement(841..1563)
                     /locus_tag="QF480_06580"
     CDS             complement(841..1563)
                     /locus_tag="QF480_06580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06263.1"
                     /translation="MKNIISVAFLMSFSIIAFAQTLPNAEFELWVDYGLFEEPELWNT
                     PNPFTTIVSQNAITVSKSLDAYSGDYSAKLETIEIFGGDFQVPGVITLADINVDFISA
                     TYSISGGMALKENVSRLSGMYKYQGVEGDSATVLIYNFKRNNGGEIDTIGFGVGYLHD
                     TTSWSSFTVNMENLNYHLPDTFNVIILSSATDLHSGSTLYIDSLTIETNTGIIKLGYD
                     HISVNVYPNPSSDFVQFETKTI"
     gene            1658..>2086
                     /locus_tag="QF480_06585"
     CDS             1658..>2086
                     /locus_tag="QF480_06585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06264.1"
                     /translation="MAKLKYKFLYYSFLLFVTFSLLELNTAFAQREIDSLYILDAVIL
                     TSDSLLPVVNAHVISKFNRWGTISNKQGRFKLYVQDDDSVLITSIGFSPLILQMDAAI
                     LSSDNILEIKLPKDTITINEVIIRAYFDYPTMKQIVINMQP"
BASE COUNT          693 a          348 c          321 g          724 t
ORIGIN      
        1 taaagtcccg gtatatcagg tagtttatct ccttccgatt tgtttttatt aaggtgttta
       61 atatctacag agtttgtata tatatggaaa aagttaaagc ctactaacca atttaatttg
      121 cctactacat caccttgaaa atcgagttta actctgaaaa attctctttt ctgacgatag
      181 aatacacgtg atttataatc aacgttattg gtttcttccc aggcatgatt ataaacagca
      241 tcataaccgt taaatccata gaaactatag gtttgatctg gaatataact tatatcagta
      301 ctaatcctaa cacctttaat taatgattcc gaatcgtaat aaaatctgaa aaccccactt
      361 cctttggtat accacgaagc ttcgaaataa agcgaatggt tgtatttggg ataatgtgaa
      421 ccatctccat aatcatataa attaataagc cctccgtatt gaaatccaag atcagaatta
      481 aatgaaataa ctggaagtgc accaaagttc caccccttct taattttttc aggttttgtt
      541 ttgttctctt cctgttgggt atgagataat gtaataatga ctatgagact gatgatcacc
      601 agcaatactt ttctaatgtt gttcatagtg ctaattaaag tttttaaaat ctaacaaaag
      661 aatatgtatt tagtttttaa taaacgatcc tctgtttacc aacttatttt gttgcattac
      721 gtgatatgtg tatattccgg caggaaattc ttttacagag atttttgttc tccggttact
      781 gaagtcaata ttacttatta atttgccagc aatattataa actctaatta tcctttcatt
      841 ttaaatggtc tttgtttcaa attgcacaaa atcagaagat ggatttggat aaacatttac
      901 actaatatga tcgtaaccta attttattat tccggtattg gtctctattg taagactatc
      961 tatatacaga gtggagcctg aatgtaaatc tgtagccgaa gaaagaataa taacattaaa
     1021 tgtgtcgggt aagtggtagt ttagattttc catatttaca gtaaaagaac tccaggaagt
     1081 tgtgtcatgc aaataaccca ctccaaaacc aattgtgtct atttcccctc cgttatttcg
     1141 tttgaagtta tatatcaaaa cggtggcaga atctccttca acaccttgat atttatacat
     1201 ccccgaaagt ctagaaacat tttcctttaa tgccatacct ccgctaatac tataagtagc
     1261 agaaataaaa tctacattta tgtctgctaa cgttataacg ccaggaactt gaaaatcacc
     1321 tccaaaaatc tctatagttt caagctttgc cgaataatca cctgagtatg catctaacga
     1381 ttttgaaaca gtaatagcat tttgactcac aattgttgta aacgggtttg gggtattcca
     1441 taattcgggc tcttcaaaaa gtccgtaatc aacccataat tcaaattcgg catttggaag
     1501 agtttgagca aatgcaatta tgctgaaact catcaaaaaa gcgacggata taatattttt
     1561 cattttttta actttttatt aagcatcata agttgaatat tttttttgat gctaatttaa
     1621 gctttatatt cgttttttga aattaaaaaa gaatataatg gccaagctta aatacaaatt
     1681 cctgtattac agctttttgt tgtttgttac gttttccttg ctagagttga atactgcatt
     1741 tgcacagcga gagatagata gtttatatat acttgatgct gtaatattga ccagcgacag
     1801 tttattgcca gtagtaaatg ctcatgttat tagtaagttt aacagatggg gaacgattag
     1861 taacaaacaa ggaagattta agctttacgt tcaagatgat gattctgtac tgataacttc
     1921 cattggattt agccctttaa ttttacaaat ggatgctgca atattatcga gtgataacat
     1981 tctggaaata aagttaccaa aagacacaat aaccatcaac gaagtaatta ttagggcata
     2041 ttttgattac ccaaccatga aacagattgt gataaatatg caacct
//
LOCUS       DASCQP010000385         5933 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001437888, whole genome shotgun sequence.
ACCESSION   DASCQP010000385 DASCQP010000000
VERSION     DASCQP010000385.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 5933)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5933)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5933
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001437888"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..718)
                     /locus_tag="QF480_06590"
     CDS             complement(<1..718)
                     /locus_tag="QF480_06590"
                     /inference="COORDINATES: protein motif:HMM:NF015818.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructosamine kinase family protein"
                     /protein_id="HJN06265.1"
                     /translation="MSWKVEIAKKLSIINRTDVKVNGVSPVGGGSINDTYEVNTTEGN
                     FFVKKNSASLYPQMFEKEALGLELLSNAKSIDTPEVIAFGESENDSFLILKFIASGSK
                     THSFWDDFGRQLAGLHMHSYEYFGLNHDNYIGSLYQHNNKHNNWSDFFREERLEKQVK
                     LARNNAAIDKESVTAFDRFYARLDNIFPKEPPALLHGDLWGGNFMVSEKGNPVIIDPA
                     VYYGHREMDLGMSQLFGGFDR"
     gene            complement(810..1376)
                     /locus_tag="QF480_06595"
     CDS             complement(810..1376)
                     /locus_tag="QF480_06595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding protein"
                     /protein_id="HJN06266.1"
                     /translation="MKINKNIAILISISTIWVLMNSFSDADQIRIPYNKIVKTINKQI
                     GAQGFQLQPVEGLIDTYSQSKIFSIQSDTSISGYVYVSRVNSCRSGGCSIMPDDIALE
                     FEYFDYFFITDSIGNVLNVKVYNYQATHGHQVMSKGWLKQFIGFSGKQSLNYGKDIQA
                     ISGATISAQTLIHDLEQAEGLIQSLLNN"
     gene            complement(1388..2593)
                     /locus_tag="QF480_06600"
     CDS             complement(1388..2593)
                     /locus_tag="QF480_06600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06267.1"
                     /translation="MKAIAYILLIITLLHCNSVLFSQNENNQDFNAASLMLSSPKKLT
                     VGGYGQIDFNQPFGDNKIQNGKLDVHRLVILFGYRFNEKLSFVSEIEIGHVKEIYVEQ
                     AFLNYSVNTYLQIRGGLMLIPMGIINEYHEPTTFNGVERPLIDKYISPTTWREIGVGI
                     TGSVPELSLRYQTYLMNGFSSYNGSAQLSGKNGLRKGRQKGAESIIRTPVSASRIEYY
                     GIMGLNLGLSVYLGGTQSTEFNKLNRDDNNAMTIADSSVVKIRMFGFDARYQRNGFQF
                     RAQTYYTKLLNTSQYNYFTASDNVPNDVGNSMYGYYVEAGYNVFQELAKIKSELISFV
                     RYSAFNTQNTVVSGLSTNPAYQMQVITAGIGWKPISEVAIKADIQLLKSDQESTFRNV
                     FNAGIAIWF"
     gene            complement(2762..3211)
                     /locus_tag="QF480_06605"
     CDS             complement(2762..3211)
                     /locus_tag="QF480_06605"
                     /EC_number="4.1.2.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009597953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070497 -
                     6-carboxy-5,6,7,8-tetrahydropterin synthase activity
                     [Evidence IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase"
                     /protein_id="HJN06268.1"
                     /translation="MNPTIRITKEFKFEMAHALKGYDGPCRNIHGHSYELLVTISGKP
                     IIDTKNPKLGMVMDFGDLKKIVRTTIIDVYDHALVLNSCMPEDLNEKLSENFEKVILL
                     NYQPTSEMMVVDFANTLMKKLPPDVKLKYLQLRETVTSFAEWYAEDN"
     gene            complement(3214..4248)
                     /locus_tag="QF480_06610"
     CDS             complement(3214..4248)
                     /locus_tag="QF480_06610"
                     /inference="COORDINATES: protein motif:HMM:NF016146.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease"
                     /protein_id="HJN06269.1"
                     /translation="MIIRKYFSKVVFLGILILIKSAFAQIPPGYYDDAQGLTGAELKS
                     ALHSIINNHVEFSYNDLRDFILKNTDEDPNNTSNVILLYTGRSQDKNTFGGDPDDWNR
                     EHVWAKSHGNFGNNPPAGTDAHHIRPTDVSVNGARGNLDFDMGGSPVPEAPGCFKDGD
                     SFEPRDAVKGDVARMIFYMATRYEGGSEPDLEVVDAVNTYPNPEHGKLSQLILWNSQD
                     PPDDFEINRNDVIYYQYQENRNPFIDHPEYVEVIWGNPSKVSSHSIVDISVYPNPASN
                     RLNISTQNTEKLHYTIYSIFGNPILMGSLTTTYSKIDIQQLCNGFYFLSITDNSNKIT
                     KKITFVKSAD"
     gene            complement(4261..4809)
                     /locus_tag="QF480_06615"
     CDS             complement(4261..4809)
                     /locus_tag="QF480_06615"
                     /inference="COORDINATES: protein motif:HMM:NF014689.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese efflux pump"
                     /protein_id="HJN06270.1"
                     /translation="MLSLLVILIIIFLSIQVFPVAVGIKVEGKPGKAVILVVVLSMVQ
                     VVTYWLGLVLGDTFMHLMDDFRGTIFFIGFLLIGIRMLMETFNIRKGERTYSIDSIGH
                     VALASLAQGMNTFLVGLLFYYIFFDEQATLILLFVLTVIVAIVGIALKPGKLTLAFAS
                     LLYAIGGLIMLISAVYISFFIL"
     gene            complement(4914..5375)
                     /locus_tag="QF480_06620"
     CDS             complement(4914..5375)
                     /locus_tag="QF480_06620"
                     /inference="COORDINATES: protein motif:HMM:NF024583.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0033745 - L-methionine-(R)-S-oxide
                     reductase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HJN06271.1"
                     /translation="MDADKKQKKYQRLYSQIKDLIDKSSNNPISNMSTIAAILHHKIE
                     YFFWTGFYLLQDGKLQAGPYQGSLACINLASDKGVCWAAINKKKTFVVPNVHDFPNHI
                     ACDSRSLSEIVVPVRDENNEIIGVMDVDSSSTNSFDEVDAQWLEKIVVLIY"
     gene            complement(5429..>5933)
                     /locus_tag="QF480_06625"
     CDS             complement(5429..>5933)
                     /locus_tag="QF480_06625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005826739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="beta-eliminating lyase-related protein"
                     /protein_id="HJN06272.1"
                     /translation="YGGMSGRDMNALAQGLYEGTEFDYLETRINQVAYLGQILKDNGV
                     PVQYPFGGHAIFIDVKRFLPFIPKEEYVAQTLACIVYLEGGVRGVEIGSIMADRDPLT
                     GLNRYPELELMRLAIPRRTYTNDHMKYVAAAIINVYEKRNEITTGLRITKEAPILRHF
                     TVELEKV"
BASE COUNT         1954 a         1109 c          897 g         1973 t
ORIGIN      
        1 gcctatcgaa gccaccaaat aattgcgaca tgcctaaatc catctcacga tgaccataat
       61 atacagcagg atcaataatt acgggatttc ctttttcact taccataaag ttccctcccc
      121 acaaatcacc gtgtaataaa gctggaggtt ccttcggaaa aatattatca agtctggcat
      181 aaaaacgatc gaatgcagtt acggattctt tatcaatagc agcattattt ctggctaact
      241 taacctgctt ttcaagtctt tcttccctaa aaaaatcgct ccagttatta tgcttattgt
      301 tatgctgata aagcgagcct atgtaattat catggttgag accaaagtac tcataactat
      361 gcatatgaag tcctgctaat tgtcttccaa aatcatccca aaatgaatgg gttttgcttc
      421 cactagctat aaatttcagg attaaaaagg aatcattctc gctttcgcca aaggctataa
      481 cttcaggggt atcaatgctt ttagcattac ttagtaattc taatcccaat gcttcttttt
      541 caaacatttg tggataaagt gaagctgagt tttttttcac aaaaaagttg ccctcagttg
      601 tatttacttc gtaagtatca tttattgagc caccacctac aggtgaaaca ccattaactt
      661 taacatcagt cctattaatt attgaaagct tttttgcaat ttcaaccttc caactcatag
      721 ttgtatactt tgtccgtgaa attaataaaa agtattgaaa atgctatgga cgcatttaac
      781 ctttaggata aaacaaaagg acaagacaat taattattca acaaactctg tataagtcct
      841 tctgcttgct caagatcatg aataagcgtt tgtgctgata tagttgctcc cgaaattgcc
      901 tgaatatctt tcccataatt taaagactgt ttaccactaa agccaataaa ttgtttcaac
      961 cagcctttac tcattacctg atgcccgtgt gtggcttgat agttatatac ttttacattc
     1021 aagacgtttc ctattgaatc tgtaataaaa aaataatcaa aatattcaaa ttcaagggca
     1081 atatcatcgg gcataattga acaaccacca gaacgacaac tatttaccct acttacgtag
     1141 acataacctg aaattgaagt atcagattga atactaaaga ttttggattg cgaataagta
     1201 tctattaacc cttcaactgg ttgtaattga aatccttggg ctccaatttg cttattaata
     1261 gttttgacta ttttattata cggaattcta atctgatcag catcagaaaa actattcatc
     1321 aatacccaga tagttgatat tgaaattagt attgctatgt tcttatttat tttcaatttt
     1381 ttaaagatta aaaccagatt gcaattccag cattaaacac atttcgaaag gtactttcct
     1441 gatctgattt taataactga atatcagctt ttattgcaac ttccgaaata ggcttccagc
     1501 ctatacctgc agttattact tgcatttgat aagcagggtt tgtggataat cctgatacaa
     1561 cagtgttttg agtgttaaag gcagaatatc taacaaatga tatcaattca ctttttattt
     1621 ttgctaactc ttgaaataca ttgtaaccgg cctcaacata ataaccatac atactgtttc
     1681 caacatcatt aggaacattg tcagaggctg taaagtaatt gtactgagaa gtattaagga
     1741 gttttgtata gtatgtttga gccctgaatt gaaaaccatt tctctggtat ctggcatcaa
     1801 acccgaacat tctaattttt actaccgaag agtcggcgat tgtcattgca ttattatcat
     1861 ctctgtttaa tttgttaaac tctgttgatt gtgttcctcc taaataaaca gataaaccaa
     1921 ggttcagtcc cattatccca taatattcta ttctactagc agaaacaggt gttcgaataa
     1981 ttgattctgc ccctttttgt cttcccttgc gtaacccgtt tttcccagaa agctgtgcac
     2041 tgccgttata actgctaaaa ccattcatta aataggtttg atatcgcaat gataactcag
     2101 gaactgaacc cgtaatacca actcctattt cacgccatgt tgttggtgat atatatttat
     2161 caattaatgg gcgctcaaca ccgttaaagg tagttggttc gtggtattca ttaataatac
     2221 ccataggaat caacatcaaa ccacccctta tttgcaagta tgtatttact gaataattaa
     2281 gaaaggcttg ttctacatat atttctttta catgccctat ttcaatttcg gaaacaaaac
     2341 ttaatttttc attaaatcga tatccaaata aaattacaag acgatgtaca tctaattttc
     2401 cattctgaat tttattgtct ccgaaaggtt ggttaaaatc aatctgacca taaccaccaa
     2461 ccgtcaattt ttttggactg gatagcatca atgatgcagc attaaaatcc tggttatttt
     2521 cattttgcga gaataatact gaattacaat gtagtagagt aataattaat agtatatatg
     2581 caatagcttt cattttgtct ttgattatat taataattaa ggcaaaaata tattgctgat
     2641 gaattgctaa caatacctta ttctgggtat attaaccaaa aagacatttg ggctaaacca
     2701 ttttttgatt aaaacttaga tgttgtatta gagaataata ataaattaat tcgacagccg
     2761 actaattgtc ctcagcatac cattcggcaa aagaggtaac agtttctctt agttgtaagt
     2821 actttaattt aacatctggg ggcagttttt tcattagtgt attcgcaaag tcaactacca
     2881 tcatctcact tgtaggctga taattaagaa gaattacttt ctcaaaattt tcactaagtt
     2941 tttcattcaa atcttccggc atacaactgt ttaaaacaag cgcgtgatca taaacatcaa
     3001 taattgtggt tcttactatt ttctttaggt cgccaaaatc cataaccatg cctagcttag
     3061 ggttttttgt atcaataata ggtttacctg aaatggttac taacagctca tacgagtgtc
     3121 catgaatatt tcgacaaggg ccatcgtatc ctttaagcgc atgtgccatt tcaaatttaa
     3181 actcttttgt aattctgatt gttgggttca tgtttaatct gctgatttta caaatgtaat
     3241 ttttttagta atcttatttg agttatcagt aatagataga aaataaaatc cattacaaag
     3301 ttgttgaata tctattttcg aataagtagt tgttaaacta cccatcaaga ttggattccc
     3361 aaatatcgaa taaattgtat agtgtaattt ttcagtattt tgtgttgaaa tatttaaacg
     3421 gttggatgct ggatttgggt aaacagatat atctacaata ctgtgtgaag ataccttact
     3481 aggattcccc caaataactt cgacatattc aggatgatcg ataaatggat ttcgattttc
     3541 ttgatattga taataaataa catcatttct attaatttca aaatcatctg gaggatcttg
     3601 agagttccat aagatgagtt gtgacaactt tccatgttca ggatttggat aagtattaac
     3661 agcatcaacc acttcaagat caggttcact accaccttca taacgagtag ccatataaaa
     3721 tatcatacgt gcaacatctc cttttacagc atctcttggt tcaaaggaat caccatcttt
     3781 aaaacaaccc ggagcttcag gaacagggct tccgcccata tcaaaatcaa gatttcctct
     3841 ggcaccgttt actgatacat cagttggccg aatgtgatga gcatcagtac cagcaggtgg
     3901 attatttcca aaattaccat gcgatttagc ccaaacatgc tctcggttcc aatcgtcagg
     3961 atcacctcca aatgtatttt tgtcctgtga acggccggta taaagtaata ttacattgct
     4021 agtattgttt ggatcctcat ctgtattttt aagtatgaaa tctcgcaaat cattgtatga
     4081 aaattcaaca tgattattaa taatgctatg taatgctgac ttcaattcag ctcctgttaa
     4141 accctgagca tcatcataat aaccaggtgg tatctgcgca aaagcagatt ttattagtat
     4201 gagaatacct aaaaatacaa ctttgctaaa gtactttcta attatcatac taataataaa
     4261 ttaaagaata aaaaatgaga tataaacggc agatatgagc ataattaaac caccaattgc
     4321 ataaagcaat gatgcaaaag caagagtaag cttaccaggt ttcaaagcaa ttccaactat
     4381 agcaacaatt actgttagaa caaataacaa tattaatgtt gcctgctcat cgaaaaaaat
     4441 atagtaaaat aacaatccta ctaaaaaagt gttcatacct tgcgctaatg atgcaagggc
     4501 aacatgacct atactgtcga tagaatatgt tctttctcct tttctaatat tgaaagtttc
     4561 cattagcatc cttatcccaa taagcaaaaa tccgatgaaa aaaatcgtac ctctaaaatc
     4621 atccataaga tgcataaatg tgtcaccaag tactaagcct aaccaatatg ttactacttg
     4681 taccatcgac aatacgacaa caaggattac tgctttgccc ggtttacctt caactttaat
     4741 cccaacagct actggaaaaa cttgaatgga caggaaaata ataattagta tgactaataa
     4801 tgatagcatt caaatagatt attagactgc aaaagtaata atctggttta gataaatatg
     4861 acctaagtcg taagttcgca gaaagaagat gagcttacgc taatagtaat acactaataa
     4921 atgagaacta ctattttctc aagccattga gcatcaactt catcaaagct atttgtgcta
     4981 ctgctatcaa catccatcac tcctattatt tcattgtttt catctcttac gggaacaaca
     5041 atttctgaca aggatcgtga atcgcaagca atatggtttg ggaaatcatg aacatttgga
     5101 acaacaaagg ttttcttctt gttaatcgca gcccaacaaa ctcccttatc tgaagcaagg
     5161 tttatacaag ctaaagaacc ttgatatggt ccagcttgta attttccatc ctgtaataaa
     5221 taaaaacctg tccaaaagaa atattcaatc ttatgatgaa gtatagcggc aatagttgac
     5281 atatttgata ttggattatt gctactttta tcaatgagat cctttatctg tgaataaagc
     5341 ctttggtatt tcttttgttt tttatcggca tccatgttta gtttgtattt aatcgttacg
     5401 cgaaattaac tgaaagaata attcaaaatt aaactttctc tagttctaca gtaaaatgcc
     5461 tcaatattgg agcctctttg gttattcgta gccctgttgt tatttcgttt cttttttcat
     5521 acacattaat tatagctgcc gctacatatt tcatatggtc gttggtatag gttctgcgtg
     5581 gtatggcaag acgcatgagt tcgagttcag gatatcgatt caatccagtt aaaggatccc
     5641 tatcggccat aatacttcca atttcaacac cacgtacgcc accttctaaa tatactatac
     5701 aagccagagt ttgagcaaca tactcctctt ttgggataaa tggcaaaaac cgtttaacat
     5761 ctataaaaat tgcatggcca ccgaaaggat attgaacggg aactccatta tcttttaata
     5821 tctgacctag atatgctact tgatttatac gagtttcaag ataatcaaat tcagttcctt
     5881 cataaagtcc ctgtgcaaga gcgttcatat ccctgccaga catgccacca tat
//
LOCUS       DASCQP010000386         1523 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001438284, whole genome shotgun sequence.
ACCESSION   DASCQP010000386 DASCQP010000000
VERSION     DASCQP010000386.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1523)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1523)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1523
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001438284"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..510)
                     /locus_tag="QF480_06630"
     CDS             complement(<1..510)
                     /locus_tag="QF480_06630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06273.1"
                     /translation="MKTLIQTISTLATLAILFSMNLNASEYNFNEESYINDIPFNTEE
                     IYKDIVTDQELAEFDFEEEEYIDDIPVDSGCLTPECLYRKAVSVDFQLEEEEYIDDIK
                     FNTAFVSAASLYLQAMSVNFDYEEEAFVNDLSFNDDNISTQTHYHTLILKGFDLEDVD
                     VDIMNLRILN"
     gene            780..1301
                     /locus_tag="QF480_06635"
     CDS             780..1301
                     /locus_tag="QF480_06635"
                     /inference="COORDINATES: protein motif:HMM:NF012792.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase family protein"
                     /protein_id="HJN06274.1"
                     /translation="MRITPIIRFADIKDLSSIVEIYNQAIRSNSATGDMIEFTVAQRV
                     DWFNSFDHASFPIYTAEFNNRVVGYATLSPYRKGRQAMNKVAEISFFIDYSYHGLGIG
                     SALVSYAISDCERIGKESLLAILLDINPESVRLLKKFSFEEWGYLPDIIDFNGQKCGH
                     LIYGLNLKNRKDE"
BASE COUNT          509 a          212 c          272 g          530 t
ORIGIN      
        1 atttagtatc ctaagattca taatgtctac atccacatct tcaagatcaa atccttttaa
       61 tattaaggta tgatagtgag tttgtgtgga aatattatca tcgttgaaag acagatcgtt
      121 cacaaatgct tcttcttcgt aatcaaaatt aactgacata gcttgaaggt aaagacttgc
      181 tgcagaaaca aaagcagtat taaattttat atcatcaata tactcttctt cttcaagttg
      241 aaaatcaaca gaaactgcct ttctatataa gcattctggt gttaagcagc ctgaatcaac
      301 aggaatatca tcgatatatt cttcttcttc aaaatcaaat tcagccagtt cttgatcagt
      361 cacaatgtct ttataaattt cctctgtatt aaaaggaatg tcgttaatat atgattcttc
      421 attgaaattg tactctgatg cattaaggtt catagaaaat agaatggcta gagtagcaag
      481 tgtcgatata gtttgtatta gtgttttcat ctttttttct tttagcctct tttaaatcga
      541 ggattattta ttggcaaaaa taaaggtaga aacagcacaa gtaaaccatt attaggagaa
      601 cggagtagat ttttcggtga atggagaatt ttataaattg tatatttgtt agcaatgaaa
      661 tttggattca aaattgtttt gaaatctttc ctcatgattt gaataggcga tttttgaagt
      721 tgaaagttgt tctggaacac gaatcagttt tgtgtcttaa caagaatgcc ttaataaata
      781 tgagaataac acctataata agattcgctg atattaaaga tctatcatcg attgtagaaa
      841 tttataacca agcgattaga tcaaattcag ctactggtga tatgattgaa tttactgttg
      901 cacaaagagt tgattggttc aatagctttg atcacgcaag tttccctatt tatactgcag
      961 agtttaacaa tagagttgta gggtacgcta cactatcacc atacaggaaa ggcaggcaag
     1021 caatgaataa agttgctgaa attagtttct ttatcgacta ttcataccat ggattaggaa
     1081 taggttcagc tctggtaagt tatgctattt ctgattgcga aagaattgga aaggaatcat
     1141 tgcttgctat tttgttggat attaatcctg aaagtgtcag gctactaaag aaatttagtt
     1201 ttgaagaatg gggctatctt cctgatatta ttgactttaa tgggcagaaa tgcggacacc
     1261 tgatatatgg attaaattta aagaatagaa aagatgaata gataatagct ctaacgtcaa
     1321 tcactgattt aaaaataact tacttacttt ttcattaaga ttttctccac gcactatgaa
     1381 tacaatggtt gctggtaaga tgatgaaata attattgtaa tttataaggt gctataataa
     1441 gtacactgtt gtctgtgtca ttaagtggta taataggggt ggagattgtt cttgcgaatt
     1501 catcaaatgc tttcattatg ccg
//
LOCUS       DASCQP010000387         3911 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001439783, whole genome shotgun sequence.
ACCESSION   DASCQP010000387 DASCQP010000000
VERSION     DASCQP010000387.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3911)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3911)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3911
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001439783"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1029)
                     /locus_tag="QF480_06640"
     CDS             complement(<1..1029)
                     /locus_tag="QF480_06640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06275.1"
                     /translation="MKKNYLLFLTVIMSVFCATNIVAQHWITNQVIVGSGGDWANPDD
                     FVSIASFKPDNGATTTFGSIHTQSIQDIVINEHWAYVAAQDSIVKFNIDTYEKVAAVE
                     AIGVFRLLLNNDVLLASFQYPATENFAKVYSAEDLTLVASIGEISGESAGLLVVDELA
                     YVAVPGGWTSTVGNIAIISLLDYTLVDEINFDTLGSGIFDLYYYDGKIMSVNISAWNA
                     TTGYISVMNMIGSHIESHLINRKIESSVGVKDDTLYIVMNGTVGSINLSDFSVSDTAV
                     IEAPALSIAGTVIDTLNNLFYIATTDYTTVGKGTIYNLQGDETGSFEAGISPNAMAID
                     YRDNTGISD"
     regulatory      complement(1134..1333)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            1604..2335
                     /locus_tag="QF480_06645"
     CDS             1604..2335
                     /locus_tag="QF480_06645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06276.1"
                     /translation="MNKKYIIIISSFLLFVYGCKKETDDVNWTINEIVVTFRLEYDSI
                     NQLIKYSYFRNNALHYYVTFNYSDTSLIQKNFNINSVETAKTVYLLDSNIRAVKSISS
                     YTTNNIDTIEYSSSGFPRKIKSRNSDTLYFKDNGEDIISENVFVLFSNYAYSEALCKV
                     SLPDDFMLFNDVIPSFTGAFGSVNQHLVSSTSGFIGGPGSSSYSSRFEYTFDLEDYVT
                     EVKKYHKSTPQSGTISIFKYEFIFE"
     gene            2513..3361
                     /locus_tag="QF480_06650"
     CDS             2513..3361
                     /locus_tag="QF480_06650"
                     /inference="COORDINATES: protein motif:HMM:NF012894.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HJN06277.1"
                     /translation="MKKITLLILMLLSIFSSQAQNNDVKGSKDYDLFNRMPDYNIRNY
                     WDYQFDAHEFLISEDQNKVIEGRKIIIRFEHQNANDRNVKKPSYLQILRNYSTAIKKE
                     GGEILFEHRNANVGYYFLKTLQGKEVWVEVTTAPNIGRRYTLTIIEREPMKQDIVIKA
                     DLIKEKIQIEGKIAIYGIYFDVGSSIIKPESKESLEQIALFLKENSDINCWIVGHTDS
                     DGLFEMNSKLSLDRAKAVSSYLQGNYSIFPERLFAQGVGPLAPVSTNDTEEGKKLNRR
                     VEFVKK"
     gene            3522..>3911
                     /locus_tag="QF480_06655"
     CDS             3522..>3911
                     /locus_tag="QF480_06655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06278.1"
                     /translation="MKKLSPLLLLLLLFVYSCNTNSEKGSIEIWKNEILETEQNFTQL
                     AQEEGIPVAFLAYADEDAVLLRNNKLVIGKNTIREYYANQGSEDTSIKLMWKPEFVDV
                     AESGELGYTYGYYTFSYIDSTGKKVESD"
BASE COUNT         1423 a          619 c          678 g         1191 t
ORIGIN      
        1 atcagatatt cctgtattat ctcggtaatc aatagccatt gcattaggtg agatacctgc
       61 ctcaaaacta cctgtttcat ccccctgtag gttataaatt gtacctttgc caacggtagt
      121 ataatcagta gttgctatat aaaaaagatt gttgagtgta tcaattacag tgccggctat
      181 tgataaggcg ggagcttcaa tcacagcagt gtcagaaaca gaaaaatcgg ataggttaat
      241 agaacctaca gtgccattca ttacaatata gagtgtgtca tcttttaccc caacactgct
      301 ctcaattttt ctatttatca aatgcgattc tatgtgtgaa ccaatcatat tcattactga
      361 aatatagcct gttgtggcat tccaggcaga aatatttact gacataattt tgccatcata
      421 atagtataaa tcaaaaatcc cgctaccaag tgtgtcaaaa ttaatttcat ccaccaacgt
      481 ataatctaac agactaatta ttgcaatatt gccgacagtg ctagtccaac ctccagggac
      541 agctacatag gcaagttcat caacaactaa taatcctgct gattcacccg aaatctcacc
      601 aatactggca acaagtgtaa gatcttcagc tgagtatacc ttcgcaaaat tttctgtagc
      661 tggatattga aatgaggcta gaagtacatc attatttagt aacaacctga aaaccccaat
      721 tgcttcaaca gcagcaactt tttcgtaggt gtcgatatta aacttaacaa ttgaatcctg
      781 agcagccaca taggcccaat gctcattaat tacaatatcc tggatacttt gggtatgtat
      841 acttccaaat gtggttgtgg ccccattatc aggcttgaat gaggcgatgg atacaaaatc
      901 atcagggttg gcccaatcac cgccggagcc aacaattacc tggttagtaa tccaatgctg
      961 agcaactata ttagttgcgc aaaaaacgga cattatgacc gttaaaaata ataagtagtt
     1021 ttttttcata aaaaaagctt taaggttaaa aattaattaa ttaaacctca aaactttaca
     1081 ggaaaagatg aaattacata actaagaaat caccttgctt ttatcccgaa agctttgatt
     1141 aataatacta aggcaggtct tctgactcgc tcgcttttga ggccttcccg tccgcctaag
     1201 gcgggcagtg acctggtttc aaaagctgta tttgagctta cagcagcggg aactgtacag
     1261 gtttcacacc tgtttcccta ttaagtcatc catcaggtca gatggaattg acacccaagt
     1321 gggaacaaat gtaaagaaat taatgcacaa ttaaatcatc atgatgaaaa aaatataatg
     1381 tagttttaca atcgttgatt cataataact gaaatgaaga taataatcca aaaatcatat
     1441 ttcattaatg ttcaattata tagtatgaat tttactgtga gtataatgga tataaacgca
     1501 atcgggttgt tattagctat tagttaactg caagtcttgc aaaattatta ggtctaaata
     1561 tgctaataga ctcaaaaata ttaaactaat cactacaagt aatatgaata aaaagtatat
     1621 tataattatt tctagttttc tattatttgt atacgggtgc aagaaagaga ctgacgacgt
     1681 taattggaca ataaatgaaa tagttgttac tttcagattg gagtatgatt caataaacca
     1741 actaataaaa tattcttatt ttagaaataa tgcacttcat tactatgtta ctttcaatta
     1801 ttcagacact tctctgattc agaaaaattt taatattaat tcagtagaaa cagcgaagac
     1861 agtatactta ctagattcaa atattcgtgc tgtgaagtct atctcaagct atacaacaaa
     1921 taatattgac accattgaat actcatcatc gggatttcct cgtaagatta aaagcagaaa
     1981 ttctgataca ttatatttta aagacaatgg agaagatatt atttcagaga acgtttttgt
     2041 tctctttagt aattatgctt actcagaagc gttatgcaaa gtaagtctac cggatgattt
     2101 tatgttgttt aacgatgtaa tcccatcatt tacaggagca tttgggagtg taaatcaaca
     2161 cttagtaagc agtacttctg gttttatagg tggccctgga agttcaagtt atagttctag
     2221 atttgaatat acatttgatt tagaagatta cgttactgag gtaaaaaaat accacaaatc
     2281 tactcctcaa tctggaacta ttagtatttt taaatatgag tttatattcg agtaaaaggg
     2341 gttacaaaaa accagcagtt aacaaaagcg tatacaccat agccacagca caggattcgt
     2401 atgccaagaa atagtaaatt tgaaataaaa ataaaactca aaaacaatta atagcggcta
     2461 cggtgcatcg cagagccgtt tacggtcatt aatgatctaa atattaaaga agatgaaaaa
     2521 aattacactt ttaattctaa tgttgctttc tatcttttct tcacaagcac aaaataatga
     2581 tgtcaaggga agtaaagatt atgatttgtt taacagaatg ccagattaca atatcagaaa
     2641 ttattgggat tatcaatttg atgctcatga attcttgata tctgaggatc aaaataaagt
     2701 tatcgaaggc aggaaaataa tcattcgttt tgaacaccaa aatgctaatg acaggaatgt
     2761 gaaaaagcca tcatatttac aaatccttag aaattattct accgcaataa aaaaagaagg
     2821 tggtgaaatt ttgttcgaac atagaaatgc gaatgttggg tattactttc ttaaaacttt
     2881 acaaggtaaa gaggtgtggg ttgaagttac aacagcacca aacattggaa gacgatatac
     2941 attgactatt attgaaagag aaccaatgaa acaagacatt gtgattaaag cagatttgat
     3001 aaaagaaaaa attcaaattg aaggtaaaat agctatttat ggaatttatt ttgatgtagg
     3061 tagttccata ataaaaccag agtctaagga atcattggaa caaattgcat tatttctgaa
     3121 agaaaattct gatatcaatt gttggattgt aggccacaca gattcggatg gtttatttga
     3181 aatgaatagt aaactgtcgt tagatcgggc aaaagccgtt tcatcatatc ttcagggtaa
     3241 ttattcaatt tttccggaaa gattgtttgc tcaaggagta ggacctcttg ccccggtatc
     3301 aacgaatgat acggaagaag ggaaaaagtt aaacagaagg gtagagtttg tgaaaaaata
     3361 aaaaaccgcc aacaaataat atacgtcatt aaaacgaacg ttattcaaac gcgtgggcaa
     3421 gtgttaaaaa aatttgaata tgacacaaag tgtctgaaaa acataatttt gttgttcaat
     3481 cattttaaaa tcgttgagct taatttctaa aaatgagaaa catgaaaaaa ctatcaccat
     3541 tgttactgtt gttacttttg tttgtttatt catgtaatac gaattctgaa aaaggatcaa
     3601 ttgaaatatg gaaaaatgaa attctggaga cagagcagaa ttttacacag ttagcgcagg
     3661 aagaaggtat tcccgtagca tttttagcct atgccgatga agatgcagtg ctactacgaa
     3721 ataacaaact tgttattgga aaaaatacta tccgtgaata ctatgcaaat caaggatctg
     3781 aagatacaag cataaagcta atgtggaaac ctgaatttgt agatgtagct gaatcgggag
     3841 aacttggata tacatatggt tattatacat tttcatatat tgattcaaca ggtaagaaag
     3901 tagaaagtga t
//
LOCUS       DASCQP010000388         5172 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001442781, whole genome shotgun sequence.
ACCESSION   DASCQP010000388 DASCQP010000000
VERSION     DASCQP010000388.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 5172)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5172)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5172
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001442781"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(192..473)
                     /locus_tag="QF480_06660"
     CDS             complement(192..473)
                     /locus_tag="QF480_06660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016665395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HJN06279.1"
                     /translation="MTKLNSLLHQELRLSIISFLIGVEWADFNKLIEITSASKGNLIV
                     QISNLQKAGYLKVKKSFKGNYPHTECCITKLGRSEFEIYLENIKKMLHI"
     gene            complement(460..705)
                     /locus_tag="QF480_06665"
     CDS             complement(460..705)
                     /locus_tag="QF480_06665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06280.1"
                     /translation="MNNHLSPSPMVLMLAGSATFISGGISKFSPFIWGGVILEIGAIL
                     CAFVFGPEYHGLIFAGSILLGYVIPGLILRRIENDKA"
     gene            743..973
                     /locus_tag="QF480_06670"
     CDS             743..973
                     /locus_tag="QF480_06670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06281.1"
                     /translation="MLAELDDKTFLRHTNNANNEIYILNSKNAPNVLREIGRLREVTF
                     RDAGGGTGKEIDFDEFDSGENAFMQMIVWDPL"
     gene            983..1642
                     /locus_tag="QF480_06675"
     CDS             983..1642
                     /locus_tag="QF480_06675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06282.1"
                     /translation="MGGYRYVLCKDLSIDENNNVASPTASLFRYNNNFIDQYFQYTIE
                     LGRSFVQPLYQPTFNLRRGIYALDNLWGGLGAPTIEYPDIKYLFGKVTMYIEFDKLAR
                     DIILFFFDKYFPDKENLISPLKPLSRTTSDKVLNNIFTGCNYEEDYKIMVQKVRKLGE
                     NVPPLFNAYMNLSSTMKTFGTALNDHFGGGEETGILVTVDDIYDVKKERHLTSYQKKE
                     K"
     gene            complement(1649..2026)
                     /locus_tag="QF480_06680"
     CDS             complement(1649..2026)
                     /locus_tag="QF480_06680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06283.1"
                     /translation="MRKYAMLFIVLSMVLLVFESCKKDETCNLDAHKDQLPEDMTITF
                     TASKTGDGVINSLSYKTSEGDSTITNPSLPWTQKVDDAKGGTSVSITAQGTVKDGSLT
                     VAFTGEGGDEAVKKSDICSHSND"
     gene            2549..2740
                     /locus_tag="QF480_06685"
     CDS             2549..2740
                     /locus_tag="QF480_06685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004570569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock domain-containing protein"
                     /protein_id="HJN06284.1"
                     /translation="MEKGTVKFFNETKGFGFIMEDESKKEYFVHVSGLIDKINDGDAV
                     EFELTEGKKGLNAVNVKLI"
     gene            2998..4374
                     /locus_tag="QF480_06690"
     CDS             2998..4374
                     /locus_tag="QF480_06690"
                     /inference="COORDINATES: protein motif:HMM:NF015983.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HJN06285.1"
                     /translation="MAEEKYMKLLLINPFNKAKKGEMFDSRSISPPLGLGIIAGLTPD
                     NWDIEIIDENFDDFQFKKADLVGITVLTSAAYRAYEIAEIYRKKGITTVLGGIHVSML
                     AKEAEQYADAIVIGEAEVVWQQLLSDFQNRKLKKRYVGELVDLNNSVHPRRDLFHSDY
                     TYVNIQTTRGCPMSCDFCSVHTFNGSKYRERPVEEVLDEIETIKDDRLFFVDDNMIGY
                     TKKSADRAIRLFKGMIERGIKKDWYCQASLNIADNEEALHYAAESGCRMILIGIESEK
                     VDQLQETNKKMNIKIGVDHYEEAFQKIHKHGISVLGALVFGLDSDSLEDIQNRTDFAI
                     ESGIDAMQATIVTPLPGTSLFKRLESENRLLYTNFPEDWEHYHFLEVSHKPTKMTPKE
                     LTNAMHECWTQLWNKKTVYSKMLKTLKQTRNVKAAAWAFASNTERHNLAFGQQKSPWD
                     IDKILSLK"
     gene            4533..4850
                     /locus_tag="QF480_06695"
     CDS             4533..4850
                     /locus_tag="QF480_06695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019150628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HJN06286.1"
                     /translation="MIVKSKESKKREFKGVNFELLSTGQKSMITKMNYKQGNKVPFHS
                     HPNEQAGYVISGKIRIQFGNEDQILTTGDSYVIPENESHSVEVIDSGEVIDVFTPPRV
                     DYI"
     gene            4887..>5172
                     /locus_tag="QF480_06700"
     CDS             4887..>5172
                     /locus_tag="QF480_06700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06287.1"
                     /translation="MEDKLKEVYNPENFKQVGYELIDLISGYLKDAEQGNIPVNNFEE
                     PEKQLEFWKNYELGDNPPVKLFKDIIDRSIHVHHPKYMGHQISPAAPVSAL"
BASE COUNT         1805 a          806 c          897 g         1664 t
ORIGIN      
        1 gtaaatatga ccgacctgat gctaaagaag gggaggagaa acatgatgga catgatcatc
       61 ataaagatca tgatcataat taatctttga attaaagagg ctgtatttta tggacagcct
      121 cttatattta ttaactggaa taaaattaat tcaataataa ttgtctgaaa gtatttttgg
      181 tttcagatca gttatatatg taacatcttc ttaatattct caagataaat ttcaaactca
      241 cttcttccta gtttagtgat acagcactca gtatgcggat agtttccttt gaaggacttc
      301 ttaactttaa ggtaacctgc tttctgcaag ttggagatct gaacgattaa attaccctta
      361 cttgcagaag tgatttcaat taatttattg aaatcagccc attcaacgcc aatcagaaaa
      421 ctgattatcg ataaacgcaa ttcttggtgt aataacgaat taagctttgt cattttctat
      481 cctccgtaaa attaatcctg gaattacata gcctagtagt atgctacctg cgaaaatcag
      541 gccgtgatat tctggcccaa atacgaatgc gcataatata gcacctattt caagtattac
      601 tccaccccaa ataaatgggc taaatttaga aattccaccg ctgataaatg tagctgaacc
      661 agctaacatt aataccattg gagaaggcga aagatgatta ttcacagtat aaacaattat
      721 atcacctgtt gaaaagcaac tattgcttgc cgagttagat gataaaactt ttctaaggca
      781 taccaataat gcaaacaatg aaatttacat tttaaatagc aaaaatgctc ctaatgtttt
      841 aagagaaata ggacgtttaa gggaagttac ttttagggat gccggtggag gaacaggaaa
      901 agaaattgat tttgatgaat ttgacagcgg tgaaaatgcc tttatgcaaa tgatagtgtg
      961 ggatcctttg taaaaagaaa ttgtgggggg atatcgttat gttctttgta aagatctttc
     1021 catcgatgaa aataataatg ttgcttcacc aactgccagt ttattcagat ataataataa
     1081 ttttatagat caatatttcc agtataccat tgaattaggt cgttcgtttg tacaaccctt
     1141 atatcagcca acctttaatt tacgcagggg aatatatgct cttgataatc tctggggtgg
     1201 acttggtgct cctacaatag aatatcctga tataaaatac ctattcggca aggttactat
     1261 gtatatcgag tttgataaac tggccaggga cattatcctt ttcttttttg ataagtattt
     1321 tcctgataaa gaaaacctta tttcaccctt gaaaccactg agcagaacta ccagtgataa
     1381 ggtgttaaac aacatattca caggttgtaa ttatgaagaa gactataaaa taatggttca
     1441 aaaagtacgt aaactaggag agaatgtacc tccccttttc aatgcatata tgaacctttc
     1501 atcaacaatg aaaacatttg gcacagcact aaacgatcat tttggaggtg gtgaagaaac
     1561 cggaatcttg gtaaccgttg atgatatcta tgatgtaaaa aaagaaaggc atttaacatc
     1621 ctatcaaaag aaggaaaaat aataggaatt agtcattcga atgcgaacaa atatcacttt
     1681 tcttaactgc ttcatcgcca ccttcgccgg taaatgcaac tgtaagactt ccgtccttta
     1741 ctgttccttg tgcagtaata gaaacgcttg ttcctccttt ggcatcatca actttttgtg
     1801 tccatggcaa acttggattc gtaatagtac tatctccctc acttgttttg tatgaaaggg
     1861 aatttatcac tccatcacct gttttacttg ctgtgaaagt tattgtcata tcctcgggaa
     1921 gttgatcttt gtgagcatcc agattacaag tttcatcttt tttgcaactt tcaaacacta
     1981 ataataccat tgacagaaca ataaataaca ttgcatactt tctcataatt gtataatttt
     2041 ttgctttaat atggatttaa aaaataaagt caaatatata attttagtac taactatttc
     2101 cataggtaga taaacaaaaa cctattctct ataatttcaa tactctgtga tgtttccatt
     2161 ttagtttaag ttttaaattc gcgacgaatg ttgactagtt tacaatataa acctaatatt
     2221 tttcaatata tttttgatag gggaggttat tattgttaat tgtcaagata aattaaatta
     2281 aaaagaaact acaaggatgc taagtctgag aactttaagt tgtatgtgtt aacaagaata
     2341 tttattaaaa gtggaatgta tatgattacg taagttgttt gaacgaaaca taaattaata
     2401 ggaccttaaa gttgtttaaa taaaaaattt tggctttgac tttaatgcat ataaataatc
     2461 tctcaattaa aaatttttag cgaattgaat ttttttttgg aaaattaaca aaaatctcta
     2521 actttgcttt ttaaataatt cgttatcgat ggaaaaagga acagtaaaat tcttcaatga
     2581 aaccaaggga tttggattta tcatggaaga tgagtcaaaa aaagagtact ttgtacacgt
     2641 atctggatta attgacaaaa ttaatgatgg agacgctgta gaatttgaat taaccgaagg
     2701 taaaaaggga ttaaacgcag taaatgttaa gctgatttaa tttcaaaccc ttaattttat
     2761 tttcatagaa agaacctatc aaggttgata gtctttattg ttttgcattc attattggta
     2821 atgtattaga tgtgataaat gtatgtgtat tttttaaatg cacgtatctc tttccctttt
     2881 aattaatttc aatagtttag ttgtatttaa atctctttat tagaaaaatt taatttttaa
     2941 tattgattat tagttttaaa atcatttatt cttatttttg agttatatct ttagtacttg
     3001 gccgaagaaa aatatatgaa actgttgttg atcaacccct ttaacaaggc taagaagggt
     3061 gaaatgtttg attcacgtag tatttcacca ccccttggac taggcattat tgctggtcta
     3121 acacctgata attgggatat agaaataata gatgaaaatt ttgatgattt tcaatttaag
     3181 aaggctgatt tagttggcat tacagttcta acttctgccg catacagggc atacgaaatt
     3241 gccgaaattt atcgaaagaa gggcatcact acagtgctag gaggaattca tgtttcaatg
     3301 ttggctaaag aagcagagca atatgctgat gctattgtaa ttggagaagc tgaagtcgtt
     3361 tggcaacagc ttcttagcga ttttcagaat agaaaactca aaaaacggta tgtaggtgaa
     3421 ttagtggatt taaataatag tgtgcatccc aggcgcgatt tatttcattc tgattacacg
     3481 tatgtgaaca ttcaaaccac taggggttgc ccaatgtcat gtgacttttg ctcagtccat
     3541 acatttaatg gtagcaaata cagagaaaga cctgttgaag aagtattgga tgaaattgaa
     3601 acgattaagg atgatcgtct ctttttcgtt gatgataata tgattggata tacaaaaaaa
     3661 tcagcggatc gagcgataag gttgtttaaa ggtatgatag agcgtggcat taaaaaggac
     3721 tggtattgcc aggcatcgct aaatatagcg gataacgaag aagcactgca ttacgctgca
     3781 gaaagtggtt gcaggatgat ccttattggt attgaatcgg aaaaagtgga tcaactccag
     3841 gaaaccaata aaaagatgaa tatcaaaatt ggtgttgatc attacgaaga agcctttcaa
     3901 aagattcata aacacgggat aagtgttctg ggtgcccttg ttttcggatt ggattcagat
     3961 tcattagaag atattcaaaa tcgaactgat tttgctattg aatcaggaat agatgcaatg
     4021 caagcaacca ttgtaactcc tttacccgga accagtttgt tcaaacgtct tgaaagcgaa
     4081 aatcgattgt tatatactaa ttttccagaa gattgggagc attatcattt tttagaagta
     4141 agccataaac caactaaaat gacacccaaa gagctgacca atgctatgca cgaatgctgg
     4201 acccagcttt ggaataagaa aacagtatat agcaaaatgc ttaaaacttt aaaacaaact
     4261 agaaatgtca aagcagctgc ttgggcgttt gcatcaaata ctgaacgaca caatttagct
     4321 tttggtcaac aaaaatcacc ctgggatata gataaaatac taagcttaaa ataattaata
     4381 gagttttcta acccactata tttctagttt cttacatgta aatagaatat ctactgacct
     4441 aactttctat tcctcattgc ttgttcattt tctgtaaatt tacaaccaga atcttttaac
     4501 actagtctca tctattgacc tatattattt ttatgatagt taaatcaaaa gaatcaaaaa
     4561 agagagaatt caaaggagta aactttgagc ttctatcgac cggacagaaa tcgatgatta
     4621 ccaaaatgaa ctataaacaa ggtaacaaag ttccttttca tagtcaccct aacgaacaag
     4681 ctggttatgt gatttccgga aaaatacgaa ttcagtttgg gaatgaagat caaatcttaa
     4741 ccaccggtga ttcttatgta atccctgaaa atgagagcca tagcgttgaa gtaattgact
     4801 ccggtgaagt aattgacgta ttcacaccgc caagagtcga ttatatctaa aacaaaaaat
     4861 cacttgatac ccataaataa ttaagaatgg aagacaaatt aaaagaagtt tataatcctg
     4921 aaaattttaa acaggttgga tatgaattaa ttgatttaat atcaggttat cttaaggacg
     4981 ctgaacaagg aaatatcccg gtcaataatt ttgaagaacc cgagaaacaa ctggagtttt
     5041 ggaaaaatta tgaattagga gataatcctc ccgtaaaact ttttaaagat attattgaca
     5101 ggtctattca tgtccatcac ccaaaatata tggggcatca aatatcacct gccgcacctg
     5161 tatcagctct cg
//
LOCUS       DASCQP010000389         1631 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001443990, whole genome shotgun sequence.
ACCESSION   DASCQP010000389 DASCQP010000000
VERSION     DASCQP010000389.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1631)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1631)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1631
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001443990"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            88..408
                     /locus_tag="QF480_06705"
     CDS             88..408
                     /locus_tag="QF480_06705"
                     /inference="COORDINATES: protein motif:HMM:NF013999.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-sulfur cluster assembly factor"
                     /protein_id="HJN06288.1"
                     /translation="MNIDNLTTEETKILELLKTVMDPEVAVNIVDLGLIYEVHYQEER
                     KRIHVVTTLSTRGCPLGDTIMQNIEVVIQSVYPGMDVDVELTWEPEWTPDMITEDGRK
                     AIDG"
     gene            417..857
                     /locus_tag="QF480_06710"
     CDS             417..857
                     /locus_tag="QF480_06710"
                     /inference="COORDINATES: protein motif:HMM:TIGR00738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HJN06289.1"
                     /translation="MYSKSTEYAIRAIIFIALKGKPGKPLGAVDIAHKLDFPEAFLSK
                     VLQNLAKKNLVISVKGPGGGFYVDKEILKYTILNIVEILEDMDFLCKCGLGLHTCNHE
                     NPCPIHDEYELVKVKMRNALSYKSINQIKDEIAEGTYSMQFELN"
     gene            1112..>1631
                     /locus_tag="QF480_06715"
     CDS             1112..>1631
                     /locus_tag="QF480_06715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013548159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HJN06290.1"
                     /translation="MKKHNFYAGPSILPQYTIEKTAEAVINFAGTGLSVMEVSHRSKE
                     FVAVVDEATQLFKELLNIPDNYSVLFLGGGASTQFAMIPFNLFINKAAYLNTGAWSKK
                     AIKEAQMFGNVDVVASSEDRNFSYIPKGYTIPDDADYFHITTNNTIYGTEIKYDVDSP
                     VPLVADMSSDIFS"
BASE COUNT          575 a          264 c          286 g          506 t
ORIGIN      
        1 taacagccgt tctttataat tacaacgtct ttaagattat ttttcataaa gagaaaaaac
       61 aataaaacga actcaaattt taattagatg aatatagata atctaacaac agaagaaaca
      121 aaaattcttg aattattaaa aacggttatg gatcctgaag tagccgtaaa catagttgat
      181 ctcggtttaa tttatgaggt tcattatcag gaagagcgaa agcgtattca tgttgtaaca
      241 acattatcaa cacgaggatg tccgcttggg gataccataa tgcaaaatat tgaggtagtt
      301 atccagtcag tttaccctgg gatggatgtt gatgtggagt taacatggga accagaatgg
      361 acgccagaca tgattaccga agatggcaga aaagcaattg atggataaca actaatatgt
      421 attcaaaatc aacagaatat gccattaggg ctattatatt catagccttg aaaggaaaac
      481 ccggtaaacc attgggagct gttgatattg cacataagct cgatttcccg gaagcatttt
      541 taagtaaagt gctacaaaat cttgccaaaa aaaatctggt tatttcggta aaaggtcccg
      601 gaggcggttt ttatgtagac aaagagattc tgaaatacac catacttaac attgttgaaa
      661 tattagaaga tatggatttc ttatgtaaat gcggacttgg attacacact tgtaaccatg
      721 aaaacccatg cccaatccat gatgaatacg aattggttaa agtaaagatg cgaaatgcac
      781 tttcttacaa atctattaac cagataaagg atgagattgc agaaggcact tattcaatgc
      841 aatttgaact aaattgagtg cacataaaat tgtgtggcaa tgcttcataa ttaatttgtt
      901 tctaataatt taataaactg ccaaccatct taattcaaaa caccctgatt ctataatctt
      961 taatttttta gtagtattgg ttgaactact tattattaga atttacttta attatttgca
     1021 ttaaagttag aacgattcta aggtaaatat gcatgtaaaa cattcaataa gtcttatatt
     1081 tgccaatcgt ttaaacttta aattaatttt aatgaaaaaa cataattttt acgcgggacc
     1141 ctctatcctg ccacaatata caattgagaa aactgctgaa gcagttatta attttgccgg
     1201 tacaggatta tctgtaatgg aagtaagtca ccgtagcaag gaatttgtag ctgtggtgga
     1261 cgaagcaacc caattattca aagaattatt aaacatccct gataattatt cagtgttatt
     1321 tttaggcggt ggagcaagca cacagttcgc tatgatacca tttaatcttt tcatcaacaa
     1381 agccgcttat ttaaatacag gtgcctggtc taaaaaagca atcaaagagg cacaaatgtt
     1441 tggcaacgtt gatgttgtag cctcctcaga agacagaaat ttttcctaca tccccaaagg
     1501 ttatactatt cctgatgatg ctgattattt ccatattaca accaataata ctatttacgg
     1561 cactgaaata aagtatgatg ttgattctcc ggtgccttta gttgccgaca tgtcatcgga
     1621 tatatttagt c
//
LOCUS       DASCQP010000390         2015 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001450580, whole genome shotgun sequence.
ACCESSION   DASCQP010000390 DASCQP010000000
VERSION     DASCQP010000390.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2015)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2015)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2015
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001450580"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..771)
                     /locus_tag="QF480_06720"
     CDS             complement(<1..771)
                     /locus_tag="QF480_06720"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011966456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HJN06291.1"
                     /translation="MKLSVVIVNYNVEYFLDQCLSSVKIAMENIDGEVIVVDNNSIDG
                     SNNMVKNKYPDVNLIANKKNVGFSVANNQGIKRSKGEYILLLNPDTVVEHNTFEKVIS
                     FMEGHPDAGALGVKMVDGSGNFLPESKRGLPTPSTAFYKMFGLSSLFPRSKRFARYHL
                     GHLDNDQIHKVEILPGAFMLLRKSVLDKIGLLDESFFMYGEDIDLSYRIIKAGYYNYY
                     YPETRIIHYKGESTKKGSVNYVLVFYNAMVIFAKKHFTI"
     gene            905..>2015
                     /locus_tag="QF480_06725"
     CDS             905..>2015
                     /locus_tag="QF480_06725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06292.1"
                     /translation="MVKNILSTTGTRILNALINLVILILLTREIGSEGFGVITIILID
                     ITVIQLLVDLIAGSALIYFSSRTEIIKLLIPSYLWIIIIIGFAWVIFTFLTTFFPEFY
                     ALIVPARFEMDIIILALLNATMLTHYNLLLGKKRIGVYNIIFTVQILTLLITLLYRIF
                     VLVDPSVESWIISLYFAYGVGVILSFIAVINKIGDISLTGTFVIIKKVFSFGLITQLA
                     NILHIGNKRISFYFVKMFTGLPAVGVYGAGTQLTEGVRILGQSISLVQFSEISNSNDK
                     NYAVSLTIKLMKFSVLLTIMAVIILLIIPTEVYGLIFGADFTNIKYVIIALSPGVIAL
                     SSNTIFSHYFGGLGRPVISLWANGIGFIITIALAIL"
BASE COUNT          642 a          338 c          332 g          703 t
ORIGIN      
        1 tattgtaaag tgcttttttg cgaaaataac cattgcatta taaaatacca aaacatagtt
       61 cacacttcct tttttagtgc tttctccttt ataatgtatg atccttgtct caggataata
      121 ataattatag tatccggcct taataattct gtaactcagg tcgatatcct caccatacat
      181 aaaaaaagac tcgtcaagta agccaatttt atcaagtaca gattttctaa gcagcataaa
      241 agcaccgggc aatatttcta ctttatgtat ctgatcattg tcaaggtggc ccagatgata
      301 tcgtgcaaac ctcttactac gaggaaaaag cgaactaaga ccaaacatct tataaaaggc
      361 agttgatggt gttggtaatc ctcgtttaga ttcaggaagg aagttccctg agccgtccac
      421 catctttact cccagggcac ctgcatcagg atgaccctcc ataaaagaaa ttactttttc
      481 aaatgtgttg tgctcaacaa ctgtatcagg atttagtaat aatatgtatt cccctttaga
      541 tcttttaata ccctggttat tagcaacaga aaagcctaca ttttttttgt tggcaataag
      601 attaacatcc ggatatttat tttttaccat attgtttgag ccgtcaatag agttattgtc
      661 aactacaatt acctctccat caatattttc cattgctatt tttacagagc taaggcattg
      721 gtccagaaaa tattcaacat tgtaattaac tataactacg gacaacttca tatgtgatat
      781 ctaaagatta tcaggcaaat atacatagta tggataaaaa attatatgat gtatccacca
      841 tatttctaaa ctaaacgtta taatacaacg aatattgatt attcttattt ttgcaatact
      901 aactatggta aagaatattt taagtacaac cggaaccaga atactcaatg cactgattaa
      961 tctggtaata ttaatactac ttaccaggga gattgggagc gaaggttttg gggttatcac
     1021 tattatactg attgacataa cagtaattca gcttttggtt gatttaattg cgggcagtgc
     1081 gctaatttat tttagctcaa ggactgaaat aatcaaacta ttaatcccct cctacttgtg
     1141 gattattatt attattggtt ttgcctgggt aatatttact tttttgacca cattttttcc
     1201 agaattttat gcgctgatag tcccagccag atttgaaatg gacataataa ttcttgcttt
     1261 acttaatgcc acgatgctaa cgcactataa tctactattg ggtaaaaaga gaattggtgt
     1321 ttacaatatc atttttaccg ttcaaatcct taccttgctg ataactctac tatacagaat
     1381 atttgtgtta gttgatcctt cagtggaatc atggattata tcactttatt tcgcatatgg
     1441 agtaggtgtt attttaagct ttattgctgt aattaataaa ataggtgata ttagtttaac
     1501 tggcactttt gtgataatca agaaagtttt cagctttggc ttaataacac aattagctaa
     1561 tatattgcat ataggaaaca aaagaataag tttttatttt gtaaaaatgt ttactggtct
     1621 accagctgta ggtgtttatg gggctggtac tcaattaact gagggagttc gaatacttgg
     1681 acaaagtata tcacttgtcc agttttcaga aatatcaaac tccaatgata aaaattatgc
     1741 agttagcctt acgattaaac tgatgaagtt ttcggtgttg cttacaatta tggctgtaat
     1801 aatattactg atcattccaa ctgaagttta tgggttaata tttggcgcag attttacaaa
     1861 cattaaatat gttataatcg cacttagtcc aggtgttatt gcgctgtcat caaacacgat
     1921 tttcagccat tatttcggag gcttaggcag accggtaata agtttatggg ctaatggcat
     1981 aggatttatt ataacaattg ccctggcaat actat
//
LOCUS       DASCQP010000391         5609 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001451404, whole genome shotgun sequence.
ACCESSION   DASCQP010000391 DASCQP010000000
VERSION     DASCQP010000391.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 5609)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5609)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5609
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001451404"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1375)
                     /locus_tag="QF480_06730"
     CDS             complement(<1..1375)
                     /locus_tag="QF480_06730"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="sialidase family protein"
                     /protein_id="HJN06293.1"
                     /translation="MAKNLIILLFIVLAIITNITAQNNQYDYNMLTIGENYRIYPSNV
                     TQTEVFIVKSPIDENVLFSSCNTLTFIPFFISEGIFVSENGGNTWQGNDTCTGNPMLL
                     HGGDPGIAIDKNGRFILTRLGRSPFVGLYSHYSLDNGNTWSGQSVISTDDLERAAVIS
                     DASTSSTHYGRTYATWVKFATPFPMMFSYTDDGAETWSTPQQINSPTNRCAGGDIDVA
                     VNGDLVICWAGVTEFSPFKEIYVGFASSSNGGLNWTVSENAFDINGITGLLPNKGNIR
                     VNGLPGIAVDNSGGERNGWIYIVTGQKDKPPAGSDPDIILNRSTDSGVTWSDAIRVNQ
                     DALDNGKTQYFPTVHVDKFGAVDIIFYDDRYTTDDSTGVTLARSTDGGDNWKEFEISD
                     HNFKPIPIGGLGQGYQGDNIDITSTTTKLWPVWMGNSTGIYQIWTVPINYSSVDAINE
                     EAQLSFEL"
     gene            complement(1433..3517)
                     /locus_tag="QF480_06735"
     CDS             complement(1433..3517)
                     /locus_tag="QF480_06735"
                     /inference="COORDINATES: protein motif:HMM:NF012801.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HJN06294.1"
                     /translation="MAAQKVSDPDTTINISPKDSSSINIEEVVITGTRVSKKIIDIPY
                     PVTRINFVDYKYDKKIGVDDVLSSVPGMFIQSRYGNHDVRISIRGFGSKSNSGIRGVR
                     ILLDDIPESEPDGQTRIEAIDFQAISRIEIAKGNLSSLYTNAPGGVINFINDIDFMRS
                     FGVQFNQFGSFGLRRNGIKLGLRTENYGLLGAYSNHHYDGYRPHNSEHWNIVNSVVET
                     SPSENTSLKILFYFADGLIKLPGALTKEEFEADPFQADQRFIDRDVKRLSTKGRLGLR
                     FTSKFGRNLNNEFELTAYSTIKYFERTSREYRIINRYGLGLRVRYLNKSKVMGRVNEL
                     LIGSDLLFQPARTEYYTNINGNKGDQIIQLLDEKIYNNGFYISNNYEITKDGLYLLLA
                     GRYDYINFKLQEETLPSRNDNRNFNAFVPKIALNYKLSKWISVYTSYSLSYDSPAKNE
                     LESFDPTKLYNHDLKAQETKSFEVGIKGNILNSEAEFFRHLLFEATFFNLNIDNEVVP
                     YEVYSEVFFRNAAKTNRRGIELGSRVELYKDLKFTFAYTFSDFIYGKYSAITIEIDSA
                     GNIIEHEKDFSGNIVPSVPKNNLFLALSYSHPITKNVVGFAKFSFSGISGLWVNDANT
                     DKTKSYQLLNSVLGLDMKFGKLNIMMSGGMNNMLDEVYVGFTNTNSAKKRFYEAGEPR
                     NYFVSLNIGYRF"
     gene            complement(3750..>5609)
                     /locus_tag="QF480_06740"
     CDS             complement(3750..>5609)
                     /locus_tag="QF480_06740"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN06295.1"
                     /translation="TSNSDVSCLTWSDFRWGSFASFTTYFPDFAMRVSPTNPMISYRD
                     TIWAEVPTVKLYSNEAIFTATIADPSSGTFTIEYPNGNSISSFPGSLPIVITADQVPV
                     GDYLMTIRGEGPNGTPVHSREATITVIPLQPPTAEFSVSDTITCQDGALDFTDESTNG
                     PHSWLWTFEGGDPATSTEQNPTGISYNTGGSFDVSLEVTNPAGSDLITKDKFITVNAI
                     PESPTGESLSVCKNVEIPPLEAEGINILWYSDPELTELVFAGNIFNTGDTLPGDYLYF
                     ATQTIDGCESEAIEITLTIYETPNVSFIPLDPVCLNTEVFELENGEPAGGSYFGTGII
                     DETLFDASIAGAGTHNLGYRYADENLCADTAYQNITVLTLPEVTLDPFASVCLNTPPF
                     ELTGGLPLGGWYSGDGVIIDNMYDPELAGSGDHEISYTVIDENECSNSASQTITVFEV
                     PQVNIGNDTSLCGSKNITLNATIPNAASYLWIPGDFTTSSITVDSTGIGYNSQEFSVL
                     VTDENNCTGTDAVTVTFINCTGIEDIVGLENVSLYPNPNDGTFNFRIISSKSINIDLK
                     VYNALGVIYLEQNQIVINGEYSSRINLQDIKPGVYFITLQNDDGIFVKKFLVR"
BASE COUNT         1756 a         1092 c          937 g         1824 t
ORIGIN      
        1 ctaattcaaa actaagttga gcttcttcat taatcgcatc aacagatgag taattaatag
       61 gaactgtcca tatttgatag atgcctgttg agttacccat ccagacaggc caaagttttg
      121 ttgttgtaga agtgatatca atattatcac cttgataacc ttgacctagc ccaccaattg
      181 gaattggttt aaagttatga tcactaattt caaattcttt ccaattatcg ccaccatctg
      241 ttgagcgtgc aagagtaaca ccagttgaat catcagttgt gtacctgtca tcataaaata
      301 taatatcaac tgcgccaaat ttatctacat gaactgttgg gaaatattgg gttttgccat
      361 tatctaatgc atcctgatta acccgtattg catctgacca tgttacacca ctgtcggttg
      421 aacgatttaa tataatatca gggtcagaac ctgcaggtgg tttgtctttt tgtcctgtta
      481 ctatataaat ccagccattt ctttctccac cactattgtc cacagcgatt cctggcaaac
      541 cattcaccct tatatttccc ttgtttggaa gtaacccggt tattccatta atgtcaaatg
      601 cattttctga tactgtccag tttagacctc cgttggagga agaagcgaaa cccacataaa
      661 tctccttaaa aggagaaaat tcggtaacac cagcccagca tataacgaga tctccgttta
      721 ccgctacatc aatatctcca cctgcacacc tgttagttgg tgaatttatt tgctgtggag
      781 tactccatgt ctcagctcca tcatctgtgt atgaaaacat cattggaaaa ggagttgcaa
      841 acttaaccca tgtggcataa gtacgtccat aatgagtgct ggaagtactg gcatctgaaa
      901 taacagctgc ccgttcaaga tcatctgtcg atataacact ttgcccagac caggtattac
      961 cgttatccaa agaatagtga gaatataacc ctacaaaagg agatcttcct aatcgtgtaa
     1021 gtataaaacg gccatttttg tcgattgcaa taccaggatc accaccatgc aacagcattg
     1081 gattgcctgt acatgtgtca tttccctgcc atgtatttcc cccattttca cttacaaaga
     1141 ttccttcgct aataaaaaaa ggaataaagg ttaatgtgtt gcatgatgaa aataatacat
     1201 tctcatctat cggacttttt acaataaata cttcagtttg tgttacatta cttgggtaaa
     1261 ttctgtagtt ctctccaata gttagcatat tgtaatcgta ctgattattt tgagctgtaa
     1321 tattggtgat aatagccaat acgataaata ataatattat gagatttttt gccaattgcc
     1381 tcatgttgtg attaatatga attgttttgc ttaacaataa aagttaccta tttcaaaatc
     1441 tatatccaat atttagtgaa acaaaataat ttcttggttc accggcttcg tagaatcttt
     1501 tctttgcaga attagtattt gtaaaaccta cgtaaacttc atccaacata ttattcattc
     1561 ctcccgacat cattatattt aatttgccaa atttcatatc taaccctaaa actgaattta
     1621 gtaattgata tgacttggtt ttgtcggtat tagcatcatt tacccaaagt ccgcttatgc
     1681 ccgaaaagct aaattttgca aatccaacaa catttttagt tatgggatgt gaatatgaca
     1741 atgctagaaa gagattattt tttggaacac taggtactat gtttcccgaa aaatctttct
     1801 catgttctat gatgtttcca gctgaatcga tttcaattgt aatggctgaa tatttcccat
     1861 aaatgaaatc agaaaatgtg taagcaaatg taaattttag gtctttatat aattcaaccc
     1921 gtgatcctaa ttcaatgccc cttcgatttg tttttgctgc attcctgaaa aatacttcac
     1981 tataaacttc atagggaacc acttcattat caatattcaa attgaagaaa gtagcttcga
     2041 acagcagatg cctaaaaaat tcagcttcag agttaagtat attcccctta atccccactt
     2101 caaaactctt agtttcctgg gcttttaggt catgattata aagtttagta ggatcaaaac
     2161 tctccaattc gttcttagcc ggactgtcat aacttaaact ataagatgtg taaactgaaa
     2221 tccactttga caatttgtaa ttcagggcaa tctttgggac gaaggcatta aaattcctat
     2281 tatcgtttcg ggagggtaag gtttcttctt gtaatttgaa attaatgtaa tcgtatctac
     2341 cagccagcaa tagatacaaa ccatcttttg ttatttcata gttgttcgaa atatagaaac
     2401 cattattata aatcttttca tctaacaatt gaattatttg gtctccttta ttcccgttta
     2461 tattcgtata atattccgtt cttgcaggct gaaataataa gtcgcttcct attaacaatt
     2521 cattgactct gcccattact tttgatttgt ttaaatatct tacccgtaat ccaagaccat
     2581 acctgttaat tatacggtat tctcttgaag tccgttcgaa atatttgatt gtactataag
     2641 cagtgagttc aaactcatta tttaaattac gcccaaattt agaggtgaac cttaaaccaa
     2701 gacgaccctt agttgacaat cgcttcacat cccggtctat gaatcgctga tcagcctgaa
     2761 atggatctgc ttcaaattct tctttggtta atgctcctgg gagtttgata agcccatcag
     2821 caaaatagaa gagtatttta agacttgtat tttcggatgg agaggtttct actactgagt
     2881 ttacaatatt ccaatgctca ctgttgtgtg gcctataccc atcatagtga tggttactat
     2941 acgcacccag cagaccataa ttctcagttc ttaaacctaa tttaatcccg tttcgtcgta
     3001 atccgaatga gccaaattga ttaaattgaa caccaaatga tctcataaaa tcaatatcat
     3061 tgataaaatt tataacccca cccggggcgt ttgtgtacaa tgatgacaaa ttgccttttg
     3121 caatctcaat cctgcttata gcctgaaaat caattgcttc gattctggtt tggccatcgg
     3181 gttctgattc aggtatgtca tccaacagta ttctaacccc cctgattccg gaattcgatt
     3241 tactgccaaa tccccttata gatatcctta catcatggtt gccatatctg gattgtataa
     3301 acatacccgg gactgatgat agcacatcat caactccaat ttttttgtcg tatttgtaat
     3361 cgacaaagtt tattcgtgta acaggatatg gaatgtcgat tatttttttt gagaccctag
     3421 tcccggtaat tacaacctcc tcaatattaa tgcttgatga atcttttggg ctaatattta
     3481 ttgttgtatc aggatcactc actttttgcg cagccaatga ttgacaacca aaacaaatga
     3541 aagcgaataa cacagttacc caaatagaaa aagattgttt agtcactatt tccttaacga
     3601 tttgttgaaa ttaatttatc tcaaaactac aaatatattt atcaatctaa gccgaaacta
     3661 tatccaagag ttgattcgta taatgaaaaa acccgaaact tggtttcggg ccttcataaa
     3721 aatttaaatt gttaagagaa ttaagtcaat tatctaacca aaaacttctt aacaaatatt
     3781 ccatcatcat tctggagagt aataaagtat actccgggtt tgatgtcttg tagattaatt
     3841 ctagaggaat actctccatt tattacaatt tgattttgct ctaaatatat aacacctaag
     3901 gcattgtata ccttaagatc gatattaatt gatttagaag aaataatcct aaaattgaag
     3961 gttccgtcat ttggatttgg atagagactt acgttttcaa gaccaacaat atcttcaata
     4021 ccagtacaat taataaatgt aacagttaca gcatcggtac cggtacaatt attttcatca
     4081 gtaacaagta cactaaattc ctgcgaatta taacctattc cagttgaatc cacggtgatg
     4141 gaagatgtag tgaaatctcc aggaatccat agatatgaag cagcgtttgg tattgtagcg
     4201 ttcagtgtaa tatttttact tccgcatagt gaagtatcat ttccgatatt tacctgtggc
     4261 acttcaaaaa ctgtaatagt ttgcgaggct gaatttgaac attcattttc gtcgataacg
     4321 gtgtaagata tttcatgatc accggaacct gcaagttcag gatcgtacat attatcaatt
     4381 ataacaccat ctccactata ccagccacct agaggcagac ctcctgttaa ttcaaatggt
     4441 ggagtattta gacaaacaga agcaaatgga tcaagggtaa cttcaggtag cgtcaatact
     4501 gttatatttt gatatgctgt gtctgcacaa aggttttcat cagcatagcg gtacccaaga
     4561 ttatgagttc ctgctccagc tattgaagcg tcaaataatg tttcatctat aataccagtg
     4621 ccaaaatatg agcctcctgc tggttctcca ttttctaatt caaatacctc tgtattaagg
     4681 cacactggat ccagaggaat aaaacttacg ttaggagttt catatatagt caatgtaatt
     4741 tctatggctt cactctcaca tccatcaatt gtttgtgttg caaaataaag ataatcacca
     4801 gggagagtat caccagtatt aaagatatta ccagcgaaaa ctagctcagt taattcggga
     4861 tcactatacc atagtatgtt aatgccttcg gcctcaagag gtggaatttc cacattttta
     4921 catacagaca agctttcacc agtaggggat tcgggtattg cattaacagt gatgaattta
     4981 tcctttgtaa taaggtcgct gccggcagga tttgttactt caaggctgac atcaaaagag
     5041 cctcctgtat tataactaat tcctgttgga ttttgttcag ttgaagttgc aggatcgcca
     5101 ccttcaaatg tccataacca actatgtgga ccattagtag attcgtccgt aaagtcaaga
     5161 gcgccgtcct gacaagtaat tgtatcacta acactaaact cagcagttgg aggttgtaaa
     5221 gggataaccg taattgtagc ttcacgtgag tgaacaggag tgccatttgg cccttcccct
     5281 ctaattgtca tcaaataatc tcccacagga acctgatcag ctgtaattac aatcggtaga
     5341 gaacctggaa atgaagaaat agagttacca ttaggatatt caattgtaaa ggtgcctgaa
     5401 gaaggatcag cgattgttgc ggtaaagata gcttcattag aataaagttt tactgttggt
     5461 acttcagccc aaatagtatc gcgatatgat atcattggat ttgtaggaga aactctcatg
     5521 gcaaagtcgg gaaaataagt tgtaaaactg gcgaaactac cccaacgaaa gtcactccat
     5581 gttaggcaag aaacgtcaga atttgaagt
//
LOCUS       DASCQP010000392         3371 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001461666, whole genome shotgun sequence.
ACCESSION   DASCQP010000392 DASCQP010000000
VERSION     DASCQP010000392.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3371)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3371)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3371
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001461666"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(335..2674)
                     /locus_tag="QF480_06745"
     CDS             complement(335..2674)
                     /locus_tag="QF480_06745"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component regulator propeller
                     domain-containing protein"
                     /protein_id="HJN06296.1"
                     /translation="MRKSKFTSILLLYILFIPITCISQGSPIGSWRTHLPYDMIIDVA
                     IVDDMIYAATSLSIFTYNKLDNRIDRFDKVKGLNDVGISKIGYNSNTNEILVAYTNTN
                     LDIIPIDGPIINMPDIKDKEILGNKTINNIMFKDDFAYLACGFGIVILDMDRREIYDT
                     YYIGPDGNAINVFEITYNDTSLFASTENGIYYADIDGLNLADYHQWHKDQRLIYPDLP
                     YDHVVSFNGKVYANYYSGQYDMDTMFVFNGYNWAYFEKDNNSQHHQMNVVGNNMLIVN
                     QAEVQLFNKDMVFQYSVWKPGQQSINPLSANMDEEFIWVGDKSKGLVKTWNTGWNGEF
                     IKPNGPGSNNVFQLDAGGSNVWVASGGRQSNWSKLYMKDGVFSFIEDVWFTHNAWTTP
                     AFDSISDYVCVKVDPSNNSIAYIGTWQAGVVKFVDNELTDIFDDQNSSLQPWISNPNL
                     INVSGIEFDSHHNMWVANSGAPNLLSVMKTDGEWKSFNFGGSLSGKDIGELLVDSYDQ
                     KWMIKRSDGLIIVFTDNGTVDDKGDDEVKVLRSSSGQGNIPGNKIYSFASDNDGEVWV
                     GTDKGIAVFYSPGQIFVPGANYDAQQILVPRNDGSGLADYLLETELVTAITVDGDNRK
                     WIGTERAGLFLFSEDGLDQIHHFTAENSPLLSNNITSISLDDEGEVYIGTSVGIISYK
                     GTATPPQPPGSKVYAYPNPVRENFTGLIAIKGLENNSYIKITDSYGNLVYQTKSEGGQ
                     AIWDGNNFNGQRVATGIYMVFAVTIDKSEKVVTKILVVR"
     gene            complement(2879..>3371)
                     /locus_tag="QF480_06750"
     CDS             complement(2879..>3371)
                     /locus_tag="QF480_06750"
                     /inference="COORDINATES: protein motif:HMM:NF013660.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase"
                     /protein_id="HJN06297.1"
                     /translation="DSFQDLDKVYIGSMFVGATTPSYDKETEVDSTFDINNISKSQLL
                     ETATQFLGETEQVPPIFSAVKIEGKRAFEYARKNNEVKLNSRKITIRKFELLSFDLPE
                     INFIVECSKGTYIRSLVNDFGKALNNGAYMSSLRRTAIGNYTVSDALSVKEIKNAIVS
                     YRE"
BASE COUNT         1080 a          672 c          493 g         1126 t
ORIGIN      
        1 aataataggt gcacctactc ttaaaccagc aataataata acacctgctg ctgcataaat
       61 caacgggtga agtttaacat aacgtttaat ttcagtagcc ataactgtag tatatgtgaa
      121 ttaatacgct aaattaagaa tctttttaac taatcagaat tattttaaca atgaaaatta
      181 tggataggta taaggttata tggggaataa aggattatgg gtatatggga atatggctta
      241 tagtcaccca tatttcctta tttccttatt tccctatctc ccctatacct tgtattttac
      301 gattttgtaa atgaatgact cttataaagc caacctatct tactacaaga atttttgtta
      361 ctactttttc agatttatca atagtgactg caaaaaccat atagatgccg gtagcaaccc
      421 gttgtccgtt gaaattgttg ccatcccata tagcctgacc cccttcagat tttgtttgat
      481 aaaccaaatt tccatagcta tcagtaattt taatatatga attgttttcc aatcccttta
      541 tagctattaa tcctgtaaaa ttttctctaa ctggattagg gtaagcataa acctttgatc
      601 caggaggctg tggaggagta gcagtacctt tatatgaaat tataccaact gaggtgccaa
      661 tataaacttc gccttcatca tctagtgaaa tggaagtaat attattagaa agcagtggac
      721 tattctctgc agtaaaatga tgaatctgat ctaacccgtc ttcagagaaa agaaatagcc
      781 cggcacgttc tgtgccaatc cattttctgt tgtccccatc cactgtaatt gcagttacga
      841 gctccgtttc aagaaggtaa tctgcaagcc cggaaccatc atttcttgga accaaaatct
      901 gttgggcatc ataatttgcc ccaggtacaa aaatttgacc aggtgagtaa aaaacagcta
      961 tacctttatc cgttcctacc caaacttcac catcattatc agaggcaaag gaatatattt
     1021 tattacctgg aatatttcct tgtcctgatg aggatcgtaa tactttaact tcatcatctc
     1081 ccttgtcatc aactgtcccg ttatcagtaa acactataat taaaccatcg ctccgtttta
     1141 tcatccactt ttggtcgtaa ctatctacca ataattcacc aatatccttt ccgctcaacg
     1201 agccaccaaa attaaaagac ttccattctc catcggtttt cataaccgac aacagattag
     1261 gagctccaga gttagcaacc cacatattat ggtggctatc aaattcaatt ccactaacat
     1321 ttataaggtt gggattagat atccatggtt gaaggctaga gttttgatcg tcaaaaatat
     1381 cagtaagttc gttgtcaaca aatttcacaa ctcccgcttg ccatgtacca atataagcaa
     1441 tagaattgtt tgaaggatca acttttacgc aaacgtagtc acttatagaa tcaaatgccg
     1501 gagttgtcca tgcattatga gtgaaccaga catcctcaat aaatgaaaaa actccatcct
     1561 tcatatatag cttggaccag ttggattgtc ggccacctga agcaacccaa acattactac
     1621 ccccagcatc aagttgaaaa acattgtttg atccaggtcc gtttggtttg ataaactcac
     1681 cattccaacc agtattccat gtcttaacca agccctttga tttatcacca acccatataa
     1741 actcttcatc catattagct gataaaggat ttatcgactg ctgaccgggc ttccaaacac
     1801 tgtattgaaa gaccatatcc ttattaaaaa gttgtacctc agcctgattt acaattaaca
     1861 tattatttcc aacaacattc atttgatgat gctggctgtt attatccttc tcaaaataag
     1921 cccagttata accgttaaaa acaaacatag tatccatatc atactgtccg ctataataat
     1981 tagcatatac ttttccatta aaactcacaa cgtgatcata aggcaaatcg ggataaatta
     2041 aacgttgatc tttatgccat tggtgataat ccgcaaggtt taatccatca atatcagcat
     2101 aatatatgcc attctcagtt gatgcaaaca acgaagtgtc gttataagta atttcaaata
     2161 cgtttatggc attaccatca ggtccaatat agtatgtgtc gtaaatctct ctcctatcca
     2221 tatctaatat cacaatccca aagccacatg cgagatatgc aaaatcatcc ttaaacatga
     2281 tgttgttaat ggtcttgttt ccaagtatct ctttgtcttt tatatcaggc atgtttataa
     2341 ttgggccatc aattggaatt atatccagat ttgtatttgt gtaagcaacc aatatttcat
     2401 tagtgttact gttataacct attttactaa ttccaacatc attcaatcct ttaactttgt
     2461 caaacctgtc aatacgatta tcaagtttat tataagtgaa gatactcaat gaggtagccg
     2521 cataaatcat gtcatcaact atggcaacat caataatcat gtcatatggt aaatgagttc
     2581 tccaacttcc tattggtgag ccctgcgata tgcatgttat tggaataaaa agaatatata
     2641 aaagtaaaat agaagtaaac ttggattttc gcattctaag gtatatttat ttgtttatta
     2701 ttaactgcaa ataacaaaat ttattgttaa ttataatact cgacaactca aataattcat
     2761 ataaataata tggtttgtga ttgctgtatc agggtgatcg atttctgtcc ttttgtatgg
     2821 tttaataacg ttgatttgcg ctcaaaacaa attgccaata atctattatt tcagttaatc
     2881 actcacgata tgatacaatt gcatttttta tttccttaac tgacagagca tctgatacag
     2941 tgtaattacc gatagctgtt ctcctgaggc tactcatata tgccccattg ttcaatgctt
     3001 ttccaaaatc attaaccagc gacctaatat atgttccttt actacattca actataaaat
     3061 taatttctgg taaatcaaaa cttaacagtt cgaattttcg gatagtaatc tttcttgaat
     3121 tcagttttac ttcattattc tttcttgcgt attcaaaagc acgttttcct tcaattttta
     3181 ccgctgaaaa tatgggagga acttgttctg tttcaccgag aaactgcgta gccgtttcta
     3241 ataattgact ttttgaaatg ttgtttatgt caaatgtact atcaacttca gtttctttat
     3301 cgtaagaagg tgttgtggct cccacaaaca tacttcctat ataaacttta tcaagatcct
     3361 gaaatgaatc a
//
LOCUS       DASCQP010000393         2816 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001469454, whole genome shotgun sequence.
ACCESSION   DASCQP010000393 DASCQP010000000
VERSION     DASCQP010000393.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2816)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2816)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2816
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001469454"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(183..911)
                     /locus_tag="QF480_06755"
     CDS             complement(183..911)
                     /locus_tag="QF480_06755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06298.1"
                     /translation="MNKNILHDRNTVGWFNLILLLITFIFYYNVIYNHFSMDDYALYA
                     QACINLYSATFDKQWLDIAKNLSDYCIKHFYNSESRMFYYTSNLSEELVARKYEIPDN
                     VIPSSNSIIAKVLYKLGHYYDDTEYLNICEQMLVNETTNIMRSAIWYSNWASLGGLYA
                     NGITEVAITGKNAVQYSNEVQDNYLPASIFLGGNSENLPLLKNKTGNTETTYYVCKDK
                     VCDLPVYNVNEALLRIYASKIDSK"
     gene            complement(916..1710)
                     /locus_tag="QF480_06760"
     CDS             complement(916..1710)
                     /locus_tag="QF480_06760"
                     /inference="COORDINATES: protein motif:HMM:NF024109.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HJN06299.1"
                     /translation="MTKILSYKNHNIAYDTAGKGDTIVFIHGFLEDSSIWDDYSDALK
                     SKYNVIKIDLPGFGKSDIISDTHEMSLMADVVVNVLKQESINKYILVGHSMGGYVALS
                     VISNKPNNCKGLIIVNSQAGPDDDIAKKNRDRAIDIVKNNHSTFISGFVKSLFAEENI
                     SKYQKEIVEITTSSLKTSDKGIIAALKGMKIRDDSLPILKETYVPILFIIGKQDSKIP
                     FKKIHEQTMLPRLSEVLIMENVGHMSFIEARDLCLSTIECFTKKHL"
     gene            1795..2106
                     /locus_tag="QF480_06765"
     CDS             1795..2106
                     /locus_tag="QF480_06765"
                     /inference="COORDINATES: protein motif:HMM:NF012711.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HJN06300.1"
                     /translation="MSFSFLKGYNDPDVRNCTTYTEVIKNRTKSFPNHVVFRFLEDGI
                     NENGSFTFLQLQYRAQAIATSLQRTGKKGDSVLLLFQPSLEYIASLYACFYSGFVAVP
                     A"
     gene            complement(2076..>2816)
                     /locus_tag="QF480_06770"
     CDS             complement(2076..>2816)
                     /locus_tag="QF480_06770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06301.1"
                     /translation="IVIEDFYWNSPDPELLPSGFEINSALFLKEKGLTSKVAVSATYY
                     SDWSVDYYYTNPEFECDLVKNCNHIVATFTFVDSVNADYSIPFKIVLPSLRDKVEVAY
                     DDGEIITNDSITFLEGETVKIITISAANLDADYPNISFQYPNNPCDFPGPFGGGYVGR
                     INFNLRNNEPISFTSNPKIYEAYCKETLDLTVTDITQNGVTPLSYYWDGDIISHETIS
                     YQVQSSPDIVPVLVTDGCGYAGTATKPE"
BASE COUNT          939 a          466 c          434 g          977 t
ORIGIN      
        1 gaggcaagag aggaagagct tatacttacc ataaatgctg ttgaagctgg agaagcatta
       61 tcatcaatga tgtataaagc aaaagcagat attgccggcg caaaagcaga taagttagct
      121 gcagaattaa actatcaaat agcagtcgct aaattaaata gtttggtggg tgaataatag
      181 cattattttg aatcaatttt gctagcatat attctaagca gagcttcatt aacattataa
      241 actggcagat cacaaacttt atctttacat acatagtatg ttgtttctgt attccctgtc
      301 ttatttttta ataggggaag gttttcagaa tttccaccaa gaaatatgga tgcgggtaaa
      361 taattatctt gaacctcatt ggaatactga acagcatttt ttccagtaat agcaacttca
      421 gtaattccat ttgcatacaa gccacctaat gatgcccaat ttgagtacca tatggcagat
      481 ctcataatat ttgtagtttc attaaccaac atctgttcac atatattcag atattccgta
      541 tcatcataat aatgaccaag cttatacaat acctttgcaa taatagaatt tgatgatggt
      601 attacattat cgggtatttc atattttcta gcaaccaatt cttcacttaa atttgaggta
      661 taataaaaca ttctagattc ggaattataa aaatgcttaa tacagtaatc actgaggttt
      721 ttagcaatat cgagccattg tttatcaaaa gtagctgagt ataaattaat gcatgcttga
      781 gcatacaagg cataatcatc cattgagaaa tgattataaa taacattata gtagaaaata
      841 aatgttatca gtagtaatat taaattaaac catccaaccg tatttctatc atgtaaaata
      901 tttttattca taatatcaca agtgcttttt ggtgaaacac tcaattgtag ataaacatag
      961 gtctcgagcc tcaataaatg acatgtgacc tacattttcc attattagaa cctcgcttaa
     1021 ccttggtaac attgtctgct catgaatttt cttaaatgga atttttgaat cctgttttcc
     1081 tattataaat aatatcggca cataagtttc tttaagaata ggaagtgaat catctcttat
     1141 tttcattccc tttaatgctg caataatacc cttgtcagag gttttaagag atgatgtagt
     1201 tatttctact atttcctttt gatactttga aatattttct tcagcaaaaa gtgacttaac
     1261 aaatccactt ataaatgttg aatgattatt ctttacaata tctattgccc tatctctgtt
     1321 ctttttggca atatcatcat ctggacctgc ttgtgaatta acaattatta gtcccttaca
     1381 gttatttggt ttattggata taaccgatag agcaacatat cctcccattg agtggcctac
     1441 aagaatatat ttattaatgg attcttgctt taaaacattt acaacaacat cagccattag
     1501 gctcatttca tgtgtatcgc taataatatc actttttccg aacccgggca ggtctatttt
     1561 gattacatta tattttgact ttagtgcgtc tgagtaatca tcccaaattg atgaatcttc
     1621 taaaaagcca tgaataaata caattgtatc acctttacca gctgtatcat aggctatatt
     1681 atgattctta taagataaaa tttttgtcac atttttgttt tgcacaaata taatctgatt
     1741 tattggatgt aaatattgta tcaaaaaact atttttgtat aaaatcaaaa ggtcatgtca
     1801 ttttcatttc ttaaaggtta taatgatcct gatgtaagga attgcaccac atacactgaa
     1861 gtaataaaaa acagaacaaa gtcttttcca aaccatgttg tatttcgttt tttagaagat
     1921 ggtataaatg aaaatgggtc atttacattt ttgcaactac aatatagggc tcaggcaatt
     1981 gctacttctt tgcaacgaac tggtaaaaag ggtgattcag tgcttttgtt atttcaacct
     2041 tcgttagagt atattgcttc cttatacgct tgcttttatt ctggttttgt tgcagttcca
     2101 gcataaccgc aaccatctgt tacaagaaca ggaacaatat caggactcga ttgtacctga
     2161 taactaattg tttcatgtga tataatgtca ccgtcccagt aataggataa aggagtaaca
     2221 ccattttgag taatatcagt tactgttaag tcaagagttt ctttacaata agcttcgtat
     2281 atttttggat tagaagtaaa tgaaatgggc tcattatttc tcagattaaa attaatccta
     2341 cccacatagc caccaccaaa tggtccggga aaatcgcatg gattgttcgg atattgaaat
     2401 gagatatttg ggtaatcagc atcaagattt gcagctgaaa tagtaattat tttaacagtt
     2461 tcaccctcaa gaaaagtaat agagtcgttt gttatgattt ctccatcatc ataagcaacc
     2521 tcaaccttat ctctaagcga cggcagaact attttaaatg gaatagaata atctgcattt
     2581 acgctatcaa caaaagtaaa agtggctact atgtgattac agtttttaac aagatcacat
     2641 tcaaattctg gatttgtata ataataatca actgaccaat cggaataata tgtagctgat
     2701 actgctactt tgcttgtgag gcctttttct ttaagaaata gcgctgaatt aatttcaaat
     2761 cccgagggta atagctccgg atcgggactg ttccaataga aatcttcaat tacaat
//
LOCUS       DASCQP010000394         5273 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001470649, whole genome shotgun sequence.
ACCESSION   DASCQP010000394 DASCQP010000000
VERSION     DASCQP010000394.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 5273)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5273)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5273
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001470649"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..692
                     /locus_tag="QF480_06775"
     CDS             <1..692
                     /locus_tag="QF480_06775"
                     /inference="COORDINATES: protein motif:HMM:NF014695.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="respiratory nitrate reductase subunit gamma"
                     /protein_id="HJN06302.1"
                     /translation="YVAIVIMLVGSIFRYTNFGFKVSSLSSQFLESRELFYGSRPFHW
                     GILFLFFGHLVAFIFPRSVLLWDSMPVRLIILEVVSFGFGLLTLFGLIMLIVRRLKHR
                     RVLVVTSKMDAFVYLILLTQVISGLWVAYFARWGSAWFAAVLTPYLRSLIYFNPDISA
                     VITLPLAIKIHIVSAFILIGMIPFTRFMHFLVYPFQYFIRSYQYVIWYWDRKKIRTSR
                     KLVNGVRSKNN"
     gene            758..2302
                     /locus_tag="QF480_06780"
     CDS             758..2302
                     /locus_tag="QF480_06780"
                     /inference="COORDINATES: protein motif:HMM:NF019310.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJN06303.1"
                     /translation="MITHKTPSLLDFSNPSIRTLHLTWIAFFLTFVVWFNMAGVLSRM
                     IEQFDWLSKSNVKALLVTNVALTIPARIIVGGLIDKYGPRRIFAGLMVIMVIPGLTFA
                     FGNNFTQLVLSRLALGAIGAGFVIGIKMTANWFTPKYIGRAEGFYAGWGNFGSAAAAA
                     AVPFVAMYMLGGDWRWSLAITSIVTAVYGIFYFFVVKDYPEGTKPAAKKKIGGAMPVS
                     SYFDLGQYIVWELPLYSALGLVAFVLHKQNINAEPMISWAQVWYTWIILGAIYIADVV
                     RILKANLPRLKAGVPESEKFPFGSIGALNSTYFANFGAELAIVSMLPMFFYEVFSNLL
                     YEDGTQIMTLTMAGAVAGSFAFMNLVARPLGGLLSDKMGSRKTTILLYMTGITVGFFL
                     MAIISKYGPVGIDGESTLIPQYNTITWLIVSVVITMFASFFVQGAEGATFAMIPSIKK
                     EMTGRIAGMAGAFGNVGAVTYLFLYNFMDDRSFLFMLSAGAFISLVYCFFMLKEPKDA
                     FVDSFE"
     gene            2364..3968
                     /locus_tag="QF480_06785"
     CDS             2364..3968
                     /locus_tag="QF480_06785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06304.1"
                     /translation="MSKINLSTWNVEDDNFWNNTGKKIATKNLWISIPALLLAFAVWI
                     MWSIIATKLKAFGFNFGMITADMNPAQITEKLKEINSLYYTLPAIAGLAGATLRIPNS
                     FLIAIGGGRNVIFFTTLLLLIPAIGVGFALQDVNTSYMTFAVYAALSGFGGGNFSSSM
                     SNISFFFPKRMQGTSLGLNAGIGNLGVGVMQKTIPWIIGFSLFGAVGADGGEVFGTAL
                     AGLQNAGWIWVPVLTISTVAVFIGMNNVITGTPKLPSTLQGVGKTIYMVVLGLIAAFV
                     GAYLLIGLHVNMWIVLPVVVILTLVLMKFATPGDIKTNLNKQFAIFSNKHTWVMTIIY
                     TMTFGSFIGFSAAFPKLSQDIFVYTNVNDPSFVNPNAPDFLMWVFLGPVIGALIRPVG
                     GWLSDKINSGAKVTAISTFAQILATLAVAYFVIQARNSATPEAYWWPFFASFMVLFLT
                     TGIGNGSTFRSIPYIFNKEQAGPVLGWTAAIAAYGAFIIPKVFGQQIKSGTPEYALYG
                     FAIYYLVCLILNWWYYQGPKAEVKNP"
     gene            3972..4676
                     /locus_tag="QF480_06790"
     CDS             3972..4676
                     /locus_tag="QF480_06790"
                     /inference="COORDINATES: protein motif:HMM:NF012257.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HJN06305.1"
                     /translation="MDCRNCPNTECFINKYCLPDWLDYTQHTKISKHISAAKSIFTEG
                     DLVRGIYVMCSGKAKVLFKTSEGKEYIIRIAGKGQLLGHRGLSEMMVYPISAATITES
                     EIAFISNENFFKLIRANKDLAFYMMMFFADELLRSEQKNMTNVLQSSNEKVAAALIRV
                     INSFGYSNKETNQIDLGMSLQDLANFSMISYPALTKVLNTLCREEIIEKTGNKLCVLN
                     ESALRSLARMESKKLI"
     gene            4713..>5273
                     /locus_tag="QF480_06795"
     CDS             4713..>5273
                     /locus_tag="QF480_06795"
                     /inference="COORDINATES: protein motif:HMM:NF012257.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HJN06306.1"
                     /translation="MERKCESCNHYNCFINKYCSTEWKPLITHYKTSTDYPAGATIFS
                     EGNPVLGIYQIYSGKIKVVTSFNGDKERIVQLAASEQMLGHRGLGGNMIYPVTAVTFE
                     SSQVSFIPIDVFYKAIRANTDLAFQMMMYYANELKASEKRMKMMASSTASEKVAVSIM
                     TIIDAFGFNKTDKTLLEFTPTRKDIAS"
BASE COUNT         1552 a          848 c         1082 g         1791 t
ORIGIN      
        1 cttacgtggc aatagttatc atgctggttg gttccatttt cagatatacg aattttggat
       61 ttaaggtgtc ttcgttatca tctcagtttc tggaaagcag agaattattt tacggtagcc
      121 gaccttttca ttggggaata ctattcctct ttttcggtca tctggtagct tttatattcc
      181 caagaagtgt attattatgg gacagtatgc ctgtaaggct gatcatctta gaagtagtat
      241 cctttggatt tggtctgtta acactgtttg gattaattat gctaattgtc cgcagattaa
      301 aacatcgcag ggtattagtg gtaacaagta agatggatgc ttttgtttat ttgattttgt
      361 taacccaggt tatttcagga ttatgggtag cttattttgc aagatgggga tccgcatggt
      421 ttgctgcagt attgacacct tacctgagat ccttaattta ttttaatcca gatatctctg
      481 ctgtaataac cctaccactg gcgatcaaaa tccatattgt atctgctttt atattgatag
      541 ggatgattcc ttttactcgt tttatgcatt ttctggtgta tccgtttcaa tatttcatta
      601 gaagctacca gtatgtgatt tggtattggg atcgcaaaaa aatcagaaca tccagaaaac
      661 tagtgaatgg tgttcgctct aagaataatt aagtaggatt aacattacag taatcataaa
      721 aataaaatat acactaataa ttagcaaata gtaaaacatg ataactcaca aaactccttc
      781 attattagat tttagtaacc caagtatcag gacattacat cttacctgga ttgcattctt
      841 tctaaccttc gttgtatggt ttaacatggc aggtgttctt tcaagaatga ttgaacagtt
      901 cgactggcta tccaaatcga atgttaaagc attattagta actaatgttg cgttaacgat
      961 tcctgcacgc ataattgtag gtggattaat tgataaatat ggcccaagaa gaatatttgc
     1021 tggcttgatg gtaattatgg ttattccggg tttaacattt gcttttggta acaattttac
     1081 gcagttggta ttatccagat tagcacttgg tgctataggt gcaggttttg taataggtat
     1141 taaaatgact gccaactggt ttactcctaa atacattggc cgtgctgaag gtttttatgc
     1201 tggttggggg aactttgggt cagcagcagc agcagcagca gttccatttg tagctatgta
     1261 tatgttgggt ggcgattggc gttggtcgtt agcaataacc agtatagtta ctgcagtata
     1321 tggtattttt tatttctttg tagtaaaaga ttacccagaa ggaactaagc ctgcagcgaa
     1381 gaagaaaata ggtggtgcta tgcccgtttc ttcatacttt gatttaggac aatatattgt
     1441 gtgggaatta ccattatata gtgctcttgg tctggtagca tttgttctac ataaacaaaa
     1501 tattaatgca gagcctatga ttagctgggc gcaggtttgg tatacatgga ttatacttgg
     1561 tgctatatat attgccgatg ttgtgagaat attaaaagct aatcttcctc gtcttaaagc
     1621 cggagtaccg gaaagtgaaa agtttccctt tggaagtatt ggagcgctga attcaaccta
     1681 ttttgcaaat tttggagccg aacttgctat cgtttcaatg cttcccatgt ttttttacga
     1741 agtgtttagc aatttacttt atgaagatgg cacccaaata atgaccttaa ctatggccgg
     1801 agctgttgca gggtcctttg cttttatgaa tttggttgct cgtccgctag gaggactcct
     1861 ctcagataaa atgggaagtc gaaaaacaac catattactt tatatgactg gtattacagt
     1921 gggctttttc ttaatggcaa ttatctcaaa atatggacct gttggcattg atggggaatc
     1981 tacactaata ccacaatata atactatcac atggctgatt gtttctgttg tcatcacaat
     2041 gttcgcttca ttctttgttc aaggagcaga aggtgcaaca tttgctatga ttccttcaat
     2101 taagaaggaa atgaccggta gaattgctgg aatggcaggg gcatttggta acgttggagc
     2161 tgtgacgtat ttgttcttat acaattttat ggatgataga tcctttttgt ttatgctttc
     2221 cgcgggtgca tttattagcc ttgtatattg cttctttatg cttaaagaac ctaaagatgc
     2281 ctttgttgat agttttgaat agtcaattta taaaagataa gatttacgat aagagataaa
     2341 aatctgatac taaaaaaata attatgtcta aaatcaatct tagtacctgg aatgtagaag
     2401 atgataactt ctggaataac actggtaaaa aaatcgctac caaaaatctt tggatttcta
     2461 ttcctgcatt actgctggct tttgcagtat ggattatgtg gagtattatt gccacaaaac
     2521 ttaaagcttt tggtttcaac tttggtatga taacggcgga tatgaatcct gcccaaataa
     2581 ctgaaaaact taaagaaatt aatagtcttt actatacttt acctgccatt gcagggcttg
     2641 caggtgcaac actgcgtatt ccaaattcct ttttaatcgc aataggcggt ggtagaaatg
     2701 taatcttctt tactacatta cttcttctaa tcccggctat tggtgtaggt tttgctttac
     2761 aggatgtgaa tacatcttac atgacttttg cagtttatgc ggccttgtca gggtttggtg
     2821 gtggaaactt ttcctcatcc atgagtaaca ttagtttttt ctttcccaaa cgcatgcaag
     2881 gaacatcact gggcctcaat gccggtatcg gaaatctggg tgttggtgta atgcaaaaga
     2941 ctattccatg gattattgga ttttcacttt ttggagctgt tggagctgat ggtggagaag
     3001 tttttggaac tgctttggca ggacttcaaa acgctggctg gatatgggtg ccagtactaa
     3061 ctatttctac tgttgctgta tttataggca tgaacaacgt tattacagga acaccaaaat
     3121 taccatcaac attacaaggt gttggcaaaa ctatatatat ggttgtgtta ggcctgattg
     3181 cagcctttgt tggcgcttat ttattaattg gtttacatgt caatatgtgg attgtactac
     3241 ctgtggtagt gatacttact ttagtattaa tgaagtttgc cactcctggt gatattaaaa
     3301 ctaacctaaa taagcagttt gccattttca gcaataaaca tacatgggta atgacgatta
     3361 tttacacaat gaccttcggt tcgtttattg gcttttcggc tgcctttcct aagttaagcc
     3421 aggatatatt cgtttatacc aatgtaaatg atccatcatt tgttaaccca aatgcacctg
     3481 actttttaat gtgggtattc ttgggtccgg ttatcggagc attaatacgt ccagtaggtg
     3541 gatggctaag tgataagata aatagtggag ctaaggtcac tgctattagt acattcgctc
     3601 aaatactggc tactttagcg gttgcttatt ttgttattca agctcgtaat agcgcaactc
     3661 cagaagcata ttggtggcca ttctttgcta gttttatggt acttttctta actacaggta
     3721 ttggtaatgg ttctacattt cgcagcattc cgtacatttt taataaagag caagcaggtc
     3781 ctgtattagg ctggactgcc gctattgctg cctatggtgc atttattatt cctaaagttt
     3841 tcggacagca aataaaaagt ggcacaccgg aatacgcttt atatggtttc gcaatttatt
     3901 atttggtttg tttgatactt aattggtggt actatcaggg accaaaagct gaagtgaaaa
     3961 acccttagat tatggattgt aggaattgtc caaatacaga gtgtttcatt aacaaatact
     4021 gtcttccaga ttggttggat tatacgcagc atactaaaat tagtaagcat atatcagcag
     4081 caaaatcaat atttactgag ggagatcttg ttagagggat ttatgtaatg tgttctggta
     4141 aggcgaaagt actttttaaa actagtgaag gtaaagagta tattattaga attgctggta
     4201 agggacagct gcttggacat cgggggttaa gcgaaatgat ggtttatcca atttctgcag
     4261 ctacaataac tgaatcggaa atagctttta tatcaaatga aaacttcttt aaattaatca
     4321 gagcaaataa ggatcttgca ttttatatga tgatgttttt tgctgatgag ctactcaggt
     4381 ctgaacagaa gaatatgaca aatgtattac aatcctctaa tgagaaagtg gctgctgctc
     4441 ttataagagt aattaattct tttggctata gtaacaaaga aactaatcaa attgacctgg
     4501 gtatgagtct acaggattta gcgaattttt caatgatatc ttacccagcg ttgacaaaag
     4561 ttctgaatac tctttgcaga gaagagatca tcgagaaaac aggaaacaaa ttatgtgtat
     4621 tgaatgagtc agcattaaga agtcttgcca gaatggagtc aaaaaaacta atctaataag
     4681 attatttggt tgggattcct aattttagaa taatggaaag aaagtgcgaa agttgtaacc
     4741 attacaactg ttttattaat aagtactgct ctactgagtg gaaaccactc attactcatt
     4801 acaaaacttc aacagattat cctgcaggag caaccatttt tagtgaaggt aatccggtac
     4861 tgggtatcta tcaaatttat tcgggaaaaa ttaaggtagt tacatccttt aatggtgata
     4921 aggagcgtat tgttcaactt gcagcatctg aacaaatgtt aggtcatcgg ggtttgggtg
     4981 gcaatatgat ctatccggta acagccgtta cctttgaaag ttcacaagtt tcctttattc
     5041 caatcgatgt tttctataaa gctattaggg caaatactga cctggctttt caaatgatga
     5101 tgtattatgc aaatgagtta aaagcatctg agaaacgtat gaaaatgatg gcttcttcaa
     5161 ccgcgagtga aaaggtggcc gtgtcaatta tgaccattat cgatgcattt ggtttcaata
     5221 aaactgacaa aactctactt gaatttacac caaccagaaa agatattgca agt
//
LOCUS       DASCQP010000395         1573 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001472776, whole genome shotgun sequence.
ACCESSION   DASCQP010000395 DASCQP010000000
VERSION     DASCQP010000395.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1573)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1573)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1573
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001472776"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..233
                     /locus_tag="QF480_06800"
     CDS             <1..233
                     /locus_tag="QF480_06800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06307.1"
                     /translation="AMVIDLGPSKKKRRVYFDQPQVGNINAIVEELKSFKDSILNNTS
                     PAVTIIDGYNALNVAHMIIEKIRDSSIVLGKN"
     gene            287..1207
                     /locus_tag="QF480_06805"
     CDS             287..1207
                     /locus_tag="QF480_06805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06308.1"
                     /translation="MLRIGLKVYYLLSVLLIAGILTTTGCYKFKGDQTIPAYISIDGI
                     NLDTYYPEEGTNSSEIVDIWVYLDDALLGVFEFPEGDSVPAIFPVLAEGKHKLEIRPG
                     IKLNGISSTRVPYPFYEPIIFEEFNFIPDTVQSLGFLTTSYYPDLKFVWMEDFEQPEI
                     SIEKTVWSDTAIKRTEPENNPIAFLSANSRYSGIIDLTSELTEYGGTSYNSFEVQTPG
                     TIIIMEMNFKTDNFFTIGLLIRDNYTVDEKDLLILNHSSTWKKIYINLGANLSLHPTA
                     LDYKIIFRAGLESGSSSAKILLDNIKIVHR"
     gene            1212..>1573
                     /locus_tag="QF480_06810"
     CDS             1212..>1573
                     /locus_tag="QF480_06810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HJN06309.1"
                     /translation="MNRRLQVTKYVFFDWLAAAIAWSSFYIYRKYTEDPTIFSHTEMI
                     WDDQKLWLGILIVPVFWLTLYLVIGSYRRIYRKARLKELGQTFFVTLIGVTFIFFVLI
                     LDDIILTYKSYYQSFVAL"
BASE COUNT          514 a          225 c          292 g          542 t
ORIGIN      
        1 tggctatggt aattgacctt ggtccgagca aaaagaaaag aagagtttat tttgatcagc
       61 cacaggtggg taatataaac gcaattgttg aagaattaaa aagctttaaa gattctatcc
      121 taaataacac aagccctgct gttactataa tagatggcta caatgctttg aatgtagcac
      181 atatgattat tgaaaagatt cgtgattctt caattgttct tggaaaaaat taacctgata
      241 acaataagat tttcacttgc tcgttattag aaacataaga aacttagtgt tgagaatagg
      301 gttgaaggta tactatttat taagtgtttt attgattgct ggcattctaa caactactgg
      361 ttgttataag tttaaaggtg atcaaactat tcctgcttac atcagtattg atggaataaa
      421 tctggatact tattaccctg aggagggtac taattcaagc gaaattgttg atatttgggt
      481 ttatttagat gatgctttac ttggagtgtt tgagtttcct gaaggtgatt cggtaccagc
      541 catttttccg gtattagccg aaggtaagca taagcttgaa ataaggcctg gaataaagtt
      601 aaacggaatt tcaagtacga gagtaccata cccattttat gagccaataa tttttgaaga
      661 atttaatttc attcctgata ctgtacaatc attgggtttt ctcactactt cttattatcc
      721 tgaccttaaa tttgtttgga tggaggattt tgaacagcct gaaatttcta ttgagaaaac
      781 agtatggagt gatacagcaa ttaaacgtac agagcctgag aataatccga ttgcattttt
      841 aagcgctaac tcaaggtatt caggtataat tgatttaaca tccgaattga ctgaatatgg
      901 cggtacatcc tataatagtt ttgaggttca aacccctggc actataataa taatggaaat
      961 gaactttaaa actgataact tttttactat aggattatta attcgggata attatacagt
     1021 tgatgaaaaa gacctactaa ttttgaatca ttccagtact tggaaaaaaa tatatataaa
     1081 tttgggagct aatctttcat tacatcccac tgcacttgac tataaaataa tttttcgagc
     1141 aggattggaa agtggatcat catcagccaa aatattactt gacaatataa aaatagtaca
     1201 tagataaaat aatgaataga cggttacagg ttactaaata tgtttttttc gactggttgg
     1261 cagcagcaat tgcctggagt tcgttttaca tatatcgtaa atatacagaa gatccaacta
     1321 ttttctctca tactgaaatg atctgggatg atcagaaatt gtggctcggt atattgattg
     1381 tacccgtttt ttggctcacg ttgtatcttg ttattggatc atatcgcaga atatatcgca
     1441 aggcaaggct taaggaatta gggcaaacat ttttcgttac attaattggg gttacgttta
     1501 ttttctttgt cttgatatta gatgatataa tattaacata caagtcgtat tatcaatcgt
     1561 ttgttgcttt gtt
//
LOCUS       DASCQP010000396         2528 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001474254, whole genome shotgun sequence.
ACCESSION   DASCQP010000396 DASCQP010000000
VERSION     DASCQP010000396.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2528)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2528)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2528
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001474254"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..474
                     /locus_tag="QF480_06815"
     CDS             <1..474
                     /locus_tag="QF480_06815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018666329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0031992 - energy transducer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HJN06310.1"
                     /translation="PPPPPPKQVTKITIVDDDEEVDDDIDIDVDADDDTEMEEYIPPD
                     DDDEEIDELEIFTVVEAMPEFPGGMAKLMGYLSKNIKYPPLAKESGIQGRVFINFVVE
                     PSGSISNVKVLRGIGGGCDEEAIRVVNSMPKWKPGMQRGKPVRVSYNLPVKFTLQ"
     gene            complement(531..1451)
                     /locus_tag="QF480_06820"
     CDS             complement(531..1451)
                     /locus_tag="QF480_06820"
                     /inference="COORDINATES: protein motif:HMM:NF033516.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HJN06311.1"
                     /translation="MQTRVIEKFTKEQNQSISSTCVLLGVSRQVYYRSKKSIRNGQLK
                     ADKVISMVNNFRTLMPRIGTRKLYYLLQEELSELHVGRDKLFSILKANHMLVVHSRSY
                     HTTTDSHHRFRKHKNVIEELKIDRPEQVWVADITYIGNRQNPIYLSLITDAYSKKIVG
                     YHVCSSLDASGSIRALRMAINNRVYHNKLIHHSDRGFQYCSNLYQHILQKNNITPSMT
                     ESYDPYANAVAERVNGILKAEFLNQYEYNLSVDLMKIVVKETIGIYNSERPHYSCYMK
                     TPCQMHNQSDIKIRTYKSKNHRDKFTPVVN"
     gene            complement(1436..1834)
                     /locus_tag="QF480_06825"
     CDS             complement(1436..1834)
                     /locus_tag="QF480_06825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HJN06312.1"
                     /translation="MEKSEKVVYAKRTQKDYSLSLKLQIVTEIEQGQLSTTSAQRKYG
                     IQARSTVVSWLRKYGNFDWENQTPSNMPKTPEQKLMQLEQEVKLLKKQKAFLEKQVEQ
                     SDKKAILFDMMISVAEKEFNIPIRKKSKPE"
     gene            complement(1939..>2528)
                     /locus_tag="QF480_06830"
     CDS             complement(1939..>2528)
                     /locus_tag="QF480_06830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019539988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HJN06313.1"
                     /translation="IKTAYDMCKAKNVLFIADEVQTGIARTGKMLACDHEGVHPDILI
                     LGKALSGGTYPVSAVLADDEIMLTIKPGQHGSTFGGNPVSAKIATAALKVIKDENLEA
                     KAESLGKIFRDEMNKIDSDMIELVRGKGLLNAVIIKPKNGKTAMDVCLRMAENGVLAK
                     PTHDHIIRFAPPLVITEEELMTAIGIIRDSILSFE"
BASE COUNT          754 a          428 c          423 g          923 t
ORIGIN      
        1 cctccacctc cgcctccaaa gcaagttaca aaaatcacta ttgttgatga tgatgaagaa
       61 gttgatgatg atattgatat agatgttgat gctgatgacg atacagaaat ggaggaatat
      121 atcccaccag atgatgacga tgaagaaata gatgaactag aaatttttac agtggttgag
      181 gcaatgcctg aatttccagg gggtatggcc aaactaatgg gttatcttag taaaaatatt
      241 aaatatcctc cattggcaaa ggaaagtggt attcaaggta gagtatttat taattttgtt
      301 gttgagccaa gtggtagtat atccaatgtg aaggtattaa gaggtattgg tggcggatgc
      361 gatgaggaag ctattagagt tgttaatagt atgccaaaat ggaaacccgg tatgcaacgt
      421 ggtaaacctg ttcgagtttc gtataactta cctgtaaagt ttacacttca ataaaataaa
      481 tgactagtcc taaataaccg ttacaggttt ttagtaaaaa taaataatat ttaattaacc
      541 acaggggtaa atttatctct gtggtttttt gatttatatg ttcttatttt aatatcactt
      601 tgattgtgca tttggcaagg tgttttcata taacaagaat agtgaggtct ttcactatta
      661 taaataccaa tagtctcttt aactacaatt ttcattaaat caacggatag gttgtattca
      721 tattgattta ggaattcagc ctttaatata ccattaacac gttctgcaac tgcgttagcg
      781 taagggtcgt atgattcagt catacttggt gttatattgt ttttttggag gatgtgctga
      841 tacaaattac tgcaatattg gaatcctcta tcagaatgat gaatcagttt attatggtaa
      901 actctattat taattgccat tctcaatgct ctaattgatc ctgaagcatc taaactagag
      961 caaacatgat aaccaacaat ttttttggaa tatgcatcag taataagaga taaatagatt
     1021 ggattctgtc tattgccaat atatgttata tctgcaaccc agacttgctc tggcctatct
     1081 atttttaatt cctctattac gttcttatgt tttctaaatc tatgatgtga gtcagttgtt
     1141 gtatgatatg aacgagaatg tactactaac atatgatttg cttttagtat cgaaaataat
     1201 ttatctcttc caacatgtag ttctgacaac tcttcttgca gtaaataata taattttctt
     1261 gtgccaattc taggcataag tgttcgaaaa ttatttacca tacttattac tttatctgct
     1321 tttaattgcc catttcttat tgatttcttt gatcgataat aaacctgtct acttacccca
     1381 agtaatacac aggtagaact tatgctttga ttttgttctt ttgtgaattt ttctattact
     1441 cgggtttgga tttttttctg ataggtatat taaactcttt ttcagcaact gaaatcatca
     1501 tatcaaataa aattgctttc ttatctgatt gttcaacttg cttttctaaa aaagctttct
     1561 gcttcttgag taatttaacc tcttgttcta actgcattaa cttttgttcg ggggtcttag
     1621 gcatatttga tggcgtttga ttttcccaat caaagttacc atattttcgt aaccatgaaa
     1681 ctactgtgga gcgggcttgt ataccatatt ttctttgtgc agaggtagta cttaattgtc
     1741 cttgttcaat ctctgttaca atttgtaact ttaaggataa actgtaatcc ttctgtgtgc
     1801 gctttgcata aacgactttc tctgattttt ccattacact tctttttttg tgtaacgcta
     1861 tttcaggacg agacaaaatt gaaaacaaaa aaggctgctt cttataaagc agcctttttt
     1921 tatgcttaat aacaaatatt attcaaatga aagaatagaa tctctaataa tacctatggc
     1981 agtcatcaat tcttcttcag ttattactaa aggtggggca aaacgaatga tatgatcatg
     2041 tgttggtttt gccagaactc cattttcggc cattcttaaa caaacatcca tggctgtttt
     2101 accatttttt ggcttaatta taacagcatt caggagtcct ttgcctctaa caagctcaat
     2161 catgtccgaa tcaatcttat tcatctcatc tctgaaaatc ttacccagag attctgcttt
     2221 tgcttccaga ttttcatctt taataacctt aagagctgct gtagctattt ttgcagatac
     2281 cgggtttcct ccgaatgttg atccgtgttg gcctggttta attgttagca ttatttcatc
     2341 atcagccaat actgcagaaa caggataagt acctcctgat aaagccttcc caagaattag
     2401 aatgtcagga tgaacgcctt catgatcaca tgctaacatt ttgcctgtac gtgcaatacc
     2461 tgtttgaacc tcatctgcaa tgaaaagtac atttttagct ttacacatgt cataagccgt
     2521 cttaatat
//
LOCUS       DASCQP010000397         4601 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001474868, whole genome shotgun sequence.
ACCESSION   DASCQP010000397 DASCQP010000000
VERSION     DASCQP010000397.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4601)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4601)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4601
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001474868"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..891)
                     /locus_tag="QF480_06835"
     CDS             complement(<1..891)
                     /locus_tag="QF480_06835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008152940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HJN06314.1"
                     /translation="MKFIQAIILIIVILVSVPVSGQIGFTKVYSNAQTALIIDSLENR
                     ITTANNYENANLIFELALLYKQIDTAQSKMYALNYLTINDSISSIINRKIIYGLLAHI
                     FEQQGNSDSSHYYLSIQTTLVDGSLKEKSDILNKKYLNSNTTNNSNNKSFLGLSQTQL
                     ILILFVGILLIVVVIYFLTIKRQFRKEETIKNQELEIANTNYKEFNDSIEKAVAYNTS
                     DQAAELEKNNSIIIDLRKSLKQAEESNYLKNAFLSSMSHQIRTPLSGILGFSDLLETE
                     LAVQGNEELYAYAKNIKESGE"
     gene            1049..2557
                     /gene="accC"
                     /locus_tag="QF480_06840"
     CDS             1049..2557
                     /gene="accC"
                     /locus_tag="QF480_06840"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005846494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_function: GO:0004075 - biotin carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HJN06315.1"
                     /translation="MINKILVANRGEIAIRVIRSCREMGIKSVSVYSEADRNSLHVRF
                     ADEAYYIGPAPSNESYLVIDNIIDAAKKSGADAIHPGYGFLSENAEFSKRCEKEGIIF
                     IGPSAYAIDTMGDKITARKKMQSANVPVVPGTTEPITDLEKAVEIINEIGLPVMIKAS
                     AGGGGKGMRLVTKEEDIVSAVTSAKSEALSAFSNDEVYIEKYINSPHHIEFQIVADKH
                     GNCVHLFERECSVQRRHQKVVEETPSPIMTEKVRDDMGKHAVAAAKAVNYSGAGTIEF
                     IVDDELNYYFLEMNTRLQVEHPVTEMVVGVDLVKTQINIANGEELEFKQEDLKQTGHA
                     IEVRIYAEDSDNNFMPNPGTIEHITEPLGIGVRHDGYVYTGYEIPIYYDPMISKLIVW
                     APTRSEAIDRLKRALYAYKITGIKTSIPFLYRILDVPDFVNGRYNTHFIQNNEKYLKP
                     IKKVSQKEEDISAIAAFINYLANIDKRNGSPNCNPPVNNWKIFGRKRNVIRL"
     gene            2579..3082
                     /locus_tag="QF480_06845"
     CDS             2579..3082
                     /locus_tag="QF480_06845"
                     /inference="COORDINATES: protein motif:HMM:NF012584.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HJN06316.1"
                     /translation="MGYEIKVGDQISDIRLLNTDGNLIEVSIGDRNYKVNIVEVEKGV
                     YSIIHDGISYNVELVKKGNNKYYVTSLYNSFDIDIIDAETRYKNSRKKSEDEDNAFIS
                     TPMPGKVVKILVKEGDKVAGGDTVIVVSAMKMESEYKVVKDRLIKEVLVKEGDNIEGD
                     QPLIMLE"
     gene            3139..>4601
                     /locus_tag="QF480_06850"
     CDS             3139..>4601
                     /locus_tag="QF480_06850"
                     /EC_number="6.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007561317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016874 - ligase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA carboxylase subunit beta"
                     /protein_id="HJN06317.1"
                     /translation="MSLKSKLEILEEKSKLAELGGGQQRIDKQHKAGRLTARERINQL
                     LDSGTFVEIDKFMTHRCTDFGMEKNKTLGDGVVTGYGKIDGRLMYVFAQDFTVYGGSL
                     SRANADKIIKIMDLAMKMGAPVIGLNDSGGARIQEGVESLAGYADIFYRNVRSSGVIP
                     QVSAVLGPCAGGAVYSPAITDFILMVKDTSFMFVTGPDVIKTVTNEDVTMEDLGGAMS
                     HNKKSGVAHFTAEDDEEAMMMIRELMSFLPSNNMEDPPQKVCTDDLERTDSKLDTVVP
                     KDPNKPYNMFEIIMPVIDDNHFLEVQPHYAQNIIVGFARIAGKPIGVVANQPSVLAGV
                     LDIASSTKAARFVRFCDAFNIPLITFEDVPGFLPGTAQEFGGIIKHGAKLLYAFAEAT
                     VPKITIITRKAYGGAYDVMSSKHIGADVNYAFPTAEIAVMGPDGAVNIIYRNMPEEER
                     KEKVVEYRNNFASPYKAAELGYIDEIIYPNETRKKII"
BASE COUNT         1530 a          688 c          912 g         1471 t
ORIGIN      
        1 ttctccactt tccttgatat ttttcgcata tgcatagagc tcttcatttc cctgaacggc
       61 gagctcggtt tcaagcaaat cagagaatcc tagtatccca cttaaaggtg ttcttatctg
      121 atgactcatg ctgcttaaaa aggcattttt gagatagttt gattcttctg cttgtttaag
      181 tgactttcga agatcaataa ttatactgtt atttttctct agttcggctg cctgatcact
      241 agtattatag gcaactgctt tctcaatact gtcattaaat tctttataat ttgtgttggc
      301 tatttcaagc tcctgatttt taattgtctc ttcttttcta aactgccttt ttatggttaa
      361 aaaataaatt acaacaacaa tcagtaaaat accaacaaat aatattagaa taagctgtgt
      421 ttgcgataat cctaaaaagc ttttattatt actattgttg gttgtattac tgtttaagta
      481 ttttttattt aaaatgtcgc ttttctcctt aagagatcca tcaactagtg tagtttgaat
      541 tgataaataa taatgagatg aatcggaatt tccctgttgt tcaaaaatat gtgctaataa
      601 accataaatg attttacgat taattatcga agaaatactg tcgtttattg ttaggtaatt
      661 taatgcatac atttttgatt gagcagtgtc gatttgtttg tacagtaagg ctagttcaaa
      721 aattaaatta gcattttcgt aattattggc agttgtaatt ctattttcaa gactgtcaat
      781 gataagtgca gtttgtgcat tagaataaac ttttgtaaag ccaatctgcc ctgaaactgg
      841 tactgaaacg agaattacaa taattaggat tatggcctgt atgaatttca tatttattca
      901 tatgaataat taccaaagat atgtcatttg tttagtaaat agcacatgtc accagaccta
      961 atttgataat tttatatctt tatgcactca aaaacagttg gttgacatgt ctaaatacat
     1021 gaaaatcagc atttaatgat aaattcctat gattaataag atacttgtag ctaatagagg
     1081 agagattgcg atcagggtta taagaagctg cagggaaatg ggtattaaat ccgtttccgt
     1141 ttattctgaa gctgacagaa attcactgca tgtgcgtttt gctgatgagg cttattatat
     1201 tggtccggca ccttccaatg aaagctatct tgttattgac aacattattg atgctgcaaa
     1261 aaagagtgga gcagacgcaa ttcatcctgg ttatggtttt ttatcggaaa atgctgaatt
     1321 ttctaaaagg tgcgaaaaag aaggcattat ttttattggg ccatcggcct atgctattga
     1381 tacaatgggc gataaaatta ctgcaagaaa gaaaatgcaa agcgcaaatg ttcctgttgt
     1441 ccctggtact acagaaccta taactgattt agaaaaagca gttgagatta taaatgaaat
     1501 tggattgcca gtaatgatta aagcgagtgc gggtggtgga ggcaaaggta tgaggcttgt
     1561 tacgaaagaa gaagacattg tctctgccgt aacatctgct aaatcggaag cgttatcagc
     1621 tttttcaaat gatgaagtat atattgaaaa atatattaac tctcctcatc atatagaatt
     1681 tcaaattgtt gccgataaac atggaaattg tgttcatctg tttgaacgtg aatgttcagt
     1741 gcaacgccgt catcaaaaag tagtagaaga aacaccttca cctataatga ctgagaaagt
     1801 tagggatgac atgggcaaac atgcagtagc agctgcaaaa gcggtaaatt attcaggagc
     1861 tggtactatc gagtttatag ttgatgatga attgaattac tattttcttg aaatgaatac
     1921 ccgacttcag gttgagcatc cagttactga aatggtagtt ggagtggatc ttgtaaaaac
     1981 tcagataaat attgcaaatg gtgaagagct agagtttaaa caggaagacc ttaaacaaac
     2041 cggccacgca attgaagtcc gaatatatgc tgaagattcc gataataatt ttatgccaaa
     2101 tcctggtaca attgaacata ttactgaacc attaggtatt ggggttaggc atgatggata
     2161 tgtttatact ggttacgaaa taccaatata ttatgatcct atgatttcca aattaatagt
     2221 ttgggcacca acacgttctg aagctattga cagattgaag cgtgcattat atgcttataa
     2281 gataaccgga attaagactt ctattccttt tttgtatagg atactagatg tgcctgactt
     2341 tgttaacgga agatacaata ctcattttat tcagaacaat gagaaatatc taaagccaat
     2401 taaaaaagtt tcacagaagg aggaagatat ttctgctatt gctgctttca ttaactatct
     2461 ggctaatatt gataagcgta atgggagtcc taattgtaat ccgcctgtta ataattggaa
     2521 gattttcgga agaaaaagaa atgtcatacg tttataataa cttcattgta aattaattat
     2581 gggatacgaa attaaagttg gtgatcaaat atcagacata aggttgctta atactgatgg
     2641 taatcttatt gaagtgtcta ttggcgatag aaattataaa gtcaatatcg ttgaagttga
     2701 aaaaggagtt tattcaatta ttcatgatgg aatatcatat aatgttgagt tagttaaaaa
     2761 gggtaataat aaatattatg ttacatccct ttataactct tttgatattg atattattga
     2821 tgctgagacg agatataaaa acagtcgaaa aaaatccgag gatgaggata acgcatttat
     2881 ctcaacacca atgcccggca aggttgttaa aattcttgta aaagagggtg ataaagtagc
     2941 aggtggagat acagttattg ttgtttctgc tatgaaaatg gagagcgaat ataaggttgt
     3001 taaagacaga ttaattaaag aagtattggt taaagaaggt gataatatag agggtgatca
     3061 acccctgata atgttagagt aaaagaatac taagattaac cattcattta accattaacg
     3121 taataaatta aagaaattat gtccctaaaa tcaaaactag aaatacttga ggaaaaaagt
     3181 aaattagctg agctaggtgg tggacagcaa cgaattgata aacaacataa agctggtaga
     3241 ctgacagcaa gagagcgtat taatcaactt ctggattcag gtacatttgt tgagattgat
     3301 aaattcatga cccatcgctg tactgatttt ggaatggaaa aaaataaaac tcttggggat
     3361 ggtgttgtta ctggttatgg taaaattgat ggccgtttaa tgtatgtttt tgctcaggac
     3421 tttaccgttt acggtggttc tcttagccgt gcaaacgctg ataaaattat caaaataatg
     3481 gatctcgcca tgaaaatggg cgctccagta attggcctta acgattcagg aggtgcacga
     3541 attcaagaag gtgttgaaag tcttgcagga tatgcagaca tcttttacag aaatgtgcgt
     3601 agctcaggag ttattcctca agtttctgca gtactaggac catgtgctgg aggtgctgtt
     3661 tattcacctg ccatcaccga ttttatcctg atggttaaag atacatcgtt catgtttgta
     3721 acaggtcctg atgtaataaa aacagttaca aatgaagatg taacaatgga agatcttggt
     3781 ggtgcaatgt ctcataataa gaaatcaggc gttgcgcatt ttacagccga agacgatgaa
     3841 gaggctatga tgatgataag ggaacttatg agtttccttc cttcaaataa tatggaagat
     3901 ccaccacaga aggtttgtac agatgacctt gaaaggactg actcaaaact tgacacagtt
     3961 gttccaaaag atccaaacaa gccgtataac atgtttgaaa taataatgcc ggttattgac
     4021 gataatcatt tcctcgaagt tcaacctcat tatgcgcaga atatcattgt tggatttgct
     4081 cgcatagcgg gtaagccaat tggtgtagtt gcaaatcagc catcagttct tgctggagta
     4141 ctcgatattg ccagttctac aaaagctgcc cgatttgttc gtttttgtga tgcattcaat
     4201 attcctctta ttacatttga agacgtacca ggatttttac cgggaactgc acaggaattt
     4261 gggggaatta taaaacatgg ggctaaatta ctttatgctt tcgcagaagc tactgttcca
     4321 aaaattacaa ttataactcg taaagcatat ggcggtgctt atgatgtgat gtcaagtaaa
     4381 catattggtg ctgatgtaaa ttatgcattc ccaactgccg aaatagccgt aatgggccct
     4441 gatggtgcag ttaacattat ctatagaaat atgcctgaag aagaaagaaa agagaaagtt
     4501 gtggaatacc gtaataattt tgctagtcca tataaggccg cggagttagg ttatatcgat
     4561 gaaataattt acccaaacga aacgcgtaaa aagattattc a
//
LOCUS       DASCQP010000398         6685 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001478171, whole genome shotgun sequence.
ACCESSION   DASCQP010000398 DASCQP010000000
VERSION     DASCQP010000398.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 6685)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6685)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6685
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001478171"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..683)
                     /locus_tag="QF480_06855"
     CDS             complement(<1..683)
                     /locus_tag="QF480_06855"
                     /EC_number="2.7.2.7"
                     /inference="COORDINATES: protein motif:HMM:NF002834.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="butyrate kinase"
                     /protein_id="HJN06318.1"
                     /translation="MITKNILIIYPEAAVTKIAIYRNSEPVFLKTIRHSDEDINSFEH
                     FLDQVDFRLNSIFNELENNSIKVSNIEIVMGRSGLIKPVQQGVYEITPSMTEDLKKGV
                     MGIHVSNLGGLLAFNMAKKIGKKAYIANPIVVDELSDVARITGHPQFKRKSIFHALNH
                     KFVSTLYAKSIHKQYEDLNLIVCHIGTGGISVGAHEKGRVVDVNQAYDGGGPFSVART
                     GTLPMGQLV"
     gene            complement(751..4125)
                     /locus_tag="QF480_06860"
     CDS             complement(751..4125)
                     /locus_tag="QF480_06860"
                     /inference="COORDINATES: protein motif:HMM:NF013781.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HJN06319.1"
                     /translation="MTKVQKVYKPKNHIRIVTAASLFDGHDAAINVMRRIIQASGAEV
                     IHLGHNRSVHEIVNTAIQEDAQAIALTSYQGGHMEFFKYMHDMLADKGCGHIKIFGGG
                     GGVILPEEIKELQEYGISRIYTPDDGMEMGLQGMINDLLEKSDFPTGKNIDVGVDDIL
                     NRDYVAIAQLISAAENYPKEVIPIINKLSDKIKGNKAPVLGITGTGGAGKSSLVDEIV
                     RRFLSDFPDKTIAIISVDPSKRRSGGALLGDRIRMNAIDNPRVYMRSLATRQSNLSIS
                     KYVKDAETIAQAAGFDLIILETSGIGQSDTAIIDHSDVSFYVMTPEYGAASQLEKIDM
                     LDYADIIALNKSDKRGALDALRDVKKQYQRNNMVFEVDTNKLPVYGTVASQFNDPGVN
                     ELYTNLLKIINKKTGAKFTTTNNKLSYSPDKIYIIPPKRVRYLSEISETIRKYNGWVY
                     NQSKVAQKLYCLNQSIDIIKQNGKKSEIITLKEIYDNTLAELDPTNKKILDNWEAKRK
                     SYEGDYYTFKVRDKEFKIATKTESLSHIKIPKVSLPKYESWGEILSWVLSENVPGEFP
                     FAAGVFPFKREGEDPTRMFAGEGGPERTNRRFHYVSRGLNAKRLSTAFDSVTLYGEDP
                     DIRPDIYGKIGNSGVSISCLDDLKKLYSGFNLANPMTSVSMTINGPAPTMVAYFMNAA
                     IDQQCEIYIKENGLEKEVHKTIDSIYKKKNTVRPSYQSDIPEGNNGLGLMLLGVTGDM
                     VLPADVYAKIKKDTLSQVRGTIQADILKEDQAQNTCIFSTDFSLKLMGDIQEYFIQNN
                     VQNFYSVSISGYHIAEAGANPISQLAFTLSNGFTYVEYYLSRGMDINKFAPNLSFFFS
                     NGEDPEYAVIGRVARLIWAKAMKLKYGANERAQKLKYHIQTSGRSLHAQEIDFNDIRT
                     TLQALYAIYDNCNSLHTNAYDEAITTPTEESVRRAIAIQMIINHELGLAKNQNPLQGS
                     FIIEELTELVEEAILSEMDRLTERGGVLGSMETMYQRGKIQEESLYYENLKHSGEMPI
                     IGVNTFLGSGGSKTVIPGEVIRATEKEKEYQLYMLKQLHNTWHDEAKKVLNKLQIFAM
                     NNENVFEGLMEAAKYSSIGQITDSLFEVGGQYRRNM"
     gene            4297..6465
                     /locus_tag="QF480_06865"
     CDS             4297..6465
                     /locus_tag="QF480_06865"
                     /inference="COORDINATES: protein motif:HMM:NF021942.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S46 family peptidase"
                     /protein_id="HJN06320.1"
                     /translation="MNIKSTILIFVVIVLSRLTLIGGEGMWIPMLLQQMNEKEMQEMG
                     MKITAEDIYSINHSSLKDAILLFGRGCTSEIISKDGLLLTNHHCGYSRIQKHSTVDHD
                     YLTDGFWAMNKAEELPNPGLTASLLIEMKEVTDSVLAGVDENMTMKERQNAIRNNVKR
                     ITSNFESDSKYKAAIKPFFQGNEYYMMITEVFKDIRLVGAPPSNIGKFGGDTDNWMWP
                     RHTGDFSLFRIYVDKDGNPAEYSEDNVPYHPKYYFSISLDGVQEDDFTFVFGYPARTN
                     EYMPSYAIELITEIGNPKKIELREKRLEIFNKYSSKDPKVRLQYASKHARVSNYWKKM
                     IGESGGIKRMKGIKAKQNFENEFKSWAVSSGNTQYASLLPEFERVYKELTPISVASNY
                     IMEAGMAIEIIKFANSFRKLVALSKANPINEDAIREEITKLKRSTHGFFKDYYKPIDE
                     EVMIDMLRLYDKNISTEFKPSFFNTIDAKYKDDYKAYANYVFTKSIFDKEDKLMSFLD
                     NYKPKWYKKLLKDPAYIMGMDMGVLYNSKFGKKMTTYYNAIDSLQRIYMKAQMEMNPD
                     MRFYPDANFTLRVSYGNASGYSPKDAVYYKHYTTLEGIMEKEDPNIYDYVVTDRLSEL
                     YNNRDYGAYADKDGTLHVGFAASNHTTGGNSGSPVLNADGQLIGVNFDRCWEGTMSDL
                     MYDSTICRNISIDIRYFLFIVDKYAGAGYLLEEMKLVKSE"
BASE COUNT         2063 a         1259 c         1161 g         2202 t
ORIGIN      
        1 tcaacaagct gtcccattgg cagtgtccct gttcgggcaa cggaaaacgg tccgccacca
       61 tcataagcct ggttaacatc tacaacacgt cctttttcat gtgctccaac agatatccct
      121 cctgtgccaa tatgacaaac tattaggttc agatcttcat attgtttatg aatcgatttt
      181 gcatagagcg ttgaaacaaa cttatgattt aatgcgtgaa atatcgattt tctcttaaac
      241 tgaggatggc ctgttatcct tgcaacatcc gaaagttcat ccactacaat cggatttgcg
      301 atatatgctt tttttccaat tttttttgcc atgttaaaag caagtaatcc gcccagattt
      361 gaaacatgta tccccattac acctttcttg aggtcttcag tcatactggg agtaatctca
      421 taaacgccct gctggactgg cttaataagg ccgcttcgcc ccattactat ttcaatatta
      481 ctaaccttga ttgaattgtt ttcaagctca ttaaatatgc tgtttaacct aaagtcgact
      541 tgatctagga aatgttcaaa cgaattaata tcttcatcag aatggcgaat cgtttttaaa
      601 aaaaccggtt cagaattacg gtaaatggca atcttggtta ccgctgcttc aggataaatt
      661 ataagtatgt ttttcgtaat cataattgca ttattatgtt gtcatcgttc ctgtttatgt
      721 aaaggtggta acaacatgcc tacatttaaa tcacatattc cttctgtatt gacctccaac
      781 ctcaaacagc gaatcagtta tttgtcctat tgaagaatat ttagcagcct ccatgagtcc
      841 ttcaaaaaca ttttcattat tcatagcaaa tatctgaagt ttattaagga cttttttagc
      901 ttcatcgtgc catgtattgt gtagttgctt cagcatatat aactgatatt ccttttcttt
      961 ttcagttgca cgaataactt cacctggaat aaccgtttta gaaccgccac tacctaaaaa
     1021 tgtgttaacg ccaattatgg gcatttctcc cgaatgtttc aggttttcgt aatatagact
     1081 ttcttcctga atttttccac gttggtacat cgtttccatt gatcctagta ctccacctcg
     1141 ctcagttaag cgatccattt cgcttaatat tgcttcttca accaattcag taagttcctc
     1201 tataataaat gatccctgta atggattttg attttttgcc aatcctaatt catggttgat
     1261 aatcatctgt atggcaatag cacgtcttac agattcttcc gtaggggtgg tgatcgcctc
     1321 gtcatacgca ttggtatgca atgagttaca attgtcataa attgcataca aagcctgtaa
     1381 ggtagttcga atatcattaa aatcaatttc ctgcgcatga agcgagcgcc ccgatgtttg
     1441 aatatgatat ttaagtttct gtgctcgctc attggctccg tattttagct tcatggcttt
     1501 tgcccaaatt aggcgggcta ccctaccaat tacagcatat tcaggatctt caccattaga
     1561 gaaaaagaaa ctaagattag gagcaaattt gttaatatcc attcctcttg aaagataata
     1621 ttccacataa gtaaatccgt tagaaagagt aaaggcaagt tgacttattg gattcgcacc
     1681 tgcctctgct atatgatagc cagaaatgga aacactataa aaattttgaa cgttattttg
     1741 gatgaaatat tcttggatat cacccattaa cttcagcgaa aagtcagttg aaaaaataca
     1801 tgtattttga gcctggtcct cttttagtat atctgcctga atagtgcctc tgacttgtga
     1861 taaagtatcc tttttaattt tggcataaac atcagcgggc aacaccatat caccagttac
     1921 tcctaggagc ataagtccaa gcccgttgtt accttcagga atgtcactct gatacgacgg
     1981 ccttacagtg tttttctttt tgtatatact gtcaattgtt ttatgcacct ctttttcaag
     2041 accgttttct ttaatataaa tttcacattg ttgatcgata gctgcattca taaaataagc
     2101 taccattgta ggtgccgggc cattaatagt catagacacc gaagtcatgg gattggcaag
     2161 gttaaaccct gaataaagct ttttgagatc gtcaagacat gatatactta cacccgagtt
     2221 acctatttta ccatagatat ctggtcttat atcaggatct tcaccgtaaa gagttaccga
     2281 atcaaaagct gttgaaagcc gttttgcatt aagtccacgt gacacataat gaaatcttcg
     2341 atttgttctt tcagggccac cttcaccagc aaacatacga gttggatctt caccttcacg
     2401 tttaaaagga aaaaccccag cagcgaatgg aaattctcct ggtacgtttt cactcagcac
     2461 ccaactaagt atttcacccc aactttcata ttttggtaaa ctaactttag gtatttttat
     2521 atgtgacagt gattctgttt ttgttgcgat tttaaactct ttatctctta ccttaaaagt
     2581 ataataatca ccctcgtagg attttctttt tgcctcccag ttgtcaagta tttttttatt
     2641 ggtaggatca agttctgcaa gagtgttatc atagatttcc ttcaaagtaa taatttcact
     2701 ctttttgcca ttttgtttta taatatcaat agattgatta aggcaataaa gtttttgagc
     2761 gactttgctt tggttataaa cccatccatt gtactttctg atagtctctg aaatttctga
     2821 tagatatcta accctcttgg gtggaatgat atatattttg tcaggactat aggataattt
     2881 attattagtt gtggtaaatt tggcccctgt ttttttattg attattttta acagattcgt
     2941 gtataattca ttaacaccag gatcgttaaa ctgagatgct acagttccat aaacaggcag
     3001 tttgttagta tcaacttcga aaaccatatt attacgctga tattgttttt taacatctcg
     3061 taaagcatcc agagcacctc gtttatccga tttattcaga gcaataatgt cagcataatc
     3121 aagcatatct attttttcaa gctgactagc agcgccatat tcaggggtca tgacataaaa
     3181 tgatacatca ctatgatcaa taatggctgt gtcggactgt cctatacctg atgtttcaag
     3241 aattatcaga tcaaatccgg ctgcctgtgc aatagtttct gcatctttta catatttaga
     3301 aatactcaaa ttcgactgcc ttgtagctaa tgaacgcatg taaacacgag gattatcaat
     3361 cgcattcatg cgaattctgt cgcctagtaa tgctcctccc gatcttcttt ttgaagggtc
     3421 tactgaaatt atagcaatgg ttttgtcagg aaaatcagac aagaaacgcc ttactatttc
     3481 atcaaccaat gatgatttac cggcaccacc tgttcctgta atacccaaca cgggtgcttt
     3541 attcccctta attttatcag atagcttatt aattattgga ataacttctt tagggtaatt
     3601 ttcagcagca gaaattaatt gtgctatggc aacataatca cgatttaata tatcgtcaac
     3661 acctacatct atgttcttgc cggtcggaaa atcggatttc tctaataaat catttatcat
     3721 tccctgtaac cccatttcca tgccatcatc aggtgtgtat atacgactaa taccatattc
     3781 ttgcagctct tttatttctt ccggaagaat aactccacca ccaccaccaa atattttaat
     3841 atggccgcat cctttatcag caagcatgtc gtgcatatat ttaaaaaatt ccatgtgacc
     3901 accctgataa gaagttaggg caattgcctg tgcgtcttct tgtatggcgg tgttcacaat
     3961 ttcgtgaacc gagcgattat gacctaaatg tataacttca gcacccgaag cctgtataat
     4021 cctacgcatc acattaatag cagcatcatg cccatcaaac aatgatgctg cagtaacaat
     4081 ccgtatgtga tttttgggtt tatatacttt ttgaaccttt gtcatattta ttgaaatttc
     4141 acgtagctgc aaatatagcc ttaaatcagc aaactacttt gttatgaaaa gtcaaaatca
     4201 actcaaactt tcaaattaac taatcctgaa tcttgtttct tgctaccgtc tccatttttt
     4261 caatactttt ggcttcttat tgtaaaacag ataaatatga atattaaatc tacaatattg
     4321 atctttgttg ttattgttct ttcaaggcta acactaattg gtggagaagg gatgtggatt
     4381 cctatgcttc tgcagcaaat gaatgaaaaa gaaatgcagg agatgggcat gaaaattact
     4441 gccgaagaca tttattcaat taaccatagc agccttaaag atgctattct tctttttggt
     4501 agagggtgca cgagtgagat tatttcgaaa gatggactac ttcttactaa tcatcattgt
     4561 ggatacagtc gtattcaaaa acatagcact gttgatcatg attatttaac agatggtttt
     4621 tgggcaatga acaaagctga ggaacttcct aatcctggtc ttactgcctc attactcatt
     4681 gagatgaaag aagttaccga tagcgtactt gcaggtgttg atgaaaatat gacaatgaag
     4741 gaaagacaaa atgctattcg taataacgtt aaaagaataa cttcaaattt tgaaagtgac
     4801 tcaaaatata aggcagctat taagccattt tttcaaggca atgagtatta tatgatgatt
     4861 accgaagttt tcaaagatat tcgtctggta ggcgcaccac catcaaacat tgggaaattt
     4921 ggtggagata ctgataactg gatgtggcca cgccatactg gcgatttttc tttattcagg
     4981 atttacgttg ataaagatgg taatcctgca gaatattctg aagataatgt tccttatcac
     5041 cctaaatatt atttctcaat atctctggat ggtgtccagg aagatgactt cacatttgtt
     5101 ttcggttatc ctgcgcgtac aaatgagtat atgccttcat acgcaattga gttgattaca
     5161 gagattggaa atcccaagaa gatagaactt cgtgaaaaaa gattagagat tttcaataaa
     5221 tattcatcca aagatcccaa agttcgttta caatacgcat cgaaacatgc acgggtttcc
     5281 aattactgga aaaaaatgat tggtgaaagc ggtggtatta agcgcatgaa aggtattaaa
     5341 gccaagcaga attttgaaaa tgaatttaaa tcatgggctg tgtcctcagg aaatactcaa
     5401 tatgccagtt tactacccga atttgaaaga gtatataaag agctcactcc aatcagcgtt
     5461 gcaagtaatt atataatgga agccgggatg gctatcgaaa ttataaagtt cgctaactcc
     5521 tttagaaagc ttgttgcact gagtaaagcg aatccaatta atgaagatgc aattagggaa
     5581 gaaatcacaa aacttaaaag gtcaactcat ggatttttca aggattatta taaacctatt
     5641 gatgaggagg ttatgattga tatgttacgt ttgtacgata aaaatatatc gacagaattt
     5701 aaaccttcat ttttcaacac aatagatgct aagtataaag atgattataa agcctatgct
     5761 aattatgtgt ttacaaagtc aattttcgat aaagaagata agctcatgtc ttttctcgat
     5821 aattataagc caaaatggta taaaaaactt ttgaaagatc ctgcatacat tatgggcatg
     5881 gatatgggag tactttataa tagtaagttt ggtaaaaaaa tgacaaccta ttacaatgcc
     5941 atcgacagcc ttcaacgtat ttatatgaaa gcccaaatgg agatgaaccc tgatatgcga
     6001 ttttatccag atgcaaactt tacgctacgg gtatcatatg gaaatgcaag tggttattcc
     6061 cccaaagatg cagtttatta taaacattat acaacccttg aaggtataat ggaaaaggaa
     6121 gatccgaata tttatgatta tgttgttact gaccgcctga gtgagttgta taataataga
     6181 gattacggcg cttacgcgga taaagatggc acattacatg ttggttttgc cgccagcaac
     6241 cacacaacag gaggtaattc gggcagccca gtattaaatg ccgatggtca gcttattggt
     6301 gttaactttg atcgttgctg ggaaggaact atgagtgact tgatgtacga ttctactatt
     6361 tgtagaaata tttccattga tattcgctat ttccttttca tagttgataa atatgccggt
     6421 gcaggatatc tacttgaaga aatgaaactg gtgaaaagtg agtagtgtat agcatttcaa
     6481 tattcttgct tccaacttcc aacaaaaaaa ctactatttt tgtatagtga gtcctaaact
     6541 aaaaatacta cccctcaacg agtggattga tactaatggt aaacctttgg taatttcagg
     6601 accttgtagt gcagaaaatg aagaacaaat tttacagact gctcatcagc tagccgctat
     6661 taaacaagta aatatattca gagcg
//
LOCUS       DASCQP010000399         2344 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001480404, whole genome shotgun sequence.
ACCESSION   DASCQP010000399 DASCQP010000000
VERSION     DASCQP010000399.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2344)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2344)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2344
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001480404"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(101..484)
                     /locus_tag="QF480_06870"
     CDS             complement(101..484)
                     /locus_tag="QF480_06870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06321.1"
                     /translation="MVKKSSLIKLFLMMSLGFYNYYTAAQNLEDITVTIIFESNPADY
                     EATTAPLKYNKKFALSMQVDDGNSSIYDIGFQVFEGGTNDGTTSTGMNYSDGCSNLFS
                     FKMTSSIFMFSGGSVSLHPNLDRLV"
     gene            800..2308
                     /gene="rpoN"
                     /locus_tag="QF480_06875"
     CDS             800..2308
                     /gene="rpoN"
                     /locus_tag="QF480_06875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009860130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-54"
                     /protein_id="HJN06322.1"
                     /translation="MLNQRLQQKLLQKLSPQQILLMKLLQIPTVGLEQRIKQEIEDNP
                     ALEIDANEQSDDGQEIAEDKPDPEDKTDASDTDLDDYKAKDDEFDFNDYINEDDIPSY
                     KLKTNNYTSDEDRREVPFVSGVSFHENLQNQLSYRHLNELETQIGNYIIGNIDDSGYL
                     QRSVDAIVDDLAFTQNIDISKQEVEKVLDVIQQFDPAGIGAIDLKECLLIQINRQLED
                     SPSDKLELAKKIITRYFNDFTKKHYQKIIKRAMISDEQLREAMDVILKLNPKPGNSLS
                     ETSKENHYIIPDFTITNNGDKLELSLNSWNNTDLKVNGSFSNMMENIGKQKKSKKQRE
                     AYSFIKQKVDSARWFIDAIQQRQNTLYSTMNAIMEYQYDYLLTGDDTKLKPMILKDIA
                     EKVNLDISTISRVANSKYVQTPFGTLLIKSFFSESMQKDDGETVSTREIKTILRNIID
                     SENKDKPFTDEYLTTKLKEKGYPIARRTVAKYREQLKIPVARLRKEHIVKQT"
BASE COUNT          863 a          377 c          400 g          704 t
ORIGIN      
        1 acgcttaatc tctcttactt ttgatttgac actttgtttt ttagttgcca taacttgaat
       61 ttttattggt tataaattta tgaattctgt ccataaagat ttaaaccaat ctgtccaaat
      121 tagggtgaag acttacactt ccaccagaaa acatgaatat tgatgatgtc attttaaatg
      181 aaaaaaggtt actgcatcca tcagaatagt tcatgcctgt agatgttgtg ccatcattag
      241 ttccaccttc aaatacttga aaacctatat cataaataga actgttacca tcatcaactt
      301 gcatgcttag ggcgaatttc ttgttgtatt ttaaaggggc tgtagtagct tcgtaatctg
      361 ctggattact ttcaaagatt attgtgacgg taatatcttc aaggttttgt gcagctgtgt
      421 agtaattgta gaatcccaaa ctcatcatta aaaagagttt tattaatgag ctttttttaa
      481 ccataaattt gaccatttct tagttagtta aaataaggga tgaaagtact agcataacta
      541 gtaaaagtag tagaaaatgg tactgtgttt ttttaaatgc gtaattagtt tttcacaaaa
      601 tgttaaaaag cacgcaaaag attacatggt aattagtata catttattaa ttattcacat
      661 gtcaaatcgc actactaaac ttaataactt tagttactca actttacgtt taaaacaatt
      721 ttaaaaattg acaatccaaa attgtgccat aataaaaatg ttattatatt tgtcttgata
      781 gaattaagac taattgcaaa tgctgaatca acgcttacag caaaaattac ttcaaaagct
      841 ttctccacag caaatactgc tgatgaagtt attacaaata ccaactgtag gattggaaca
      901 gcgtattaag caggaaattg aagacaaccc agccctcgaa attgatgcca atgaacaatc
      961 tgatgatggt caggagatag cggaggataa gccggatcca gaagataaaa ccgatgctag
     1021 tgatacagat ttggatgact ataaagccaa agatgatgaa ttcgatttta atgattacat
     1081 caatgaagat gatatccctt catataaatt aaaaacaaat aattatactt ccgatgaaga
     1141 tcggagggaa gttccttttg tttcgggtgt cagcttccat gaaaatctgc aaaatcagtt
     1201 aagttatcgt caccttaacg aattagaaac ccaaatagga aattatatta tcggtaatat
     1261 tgacgattca gggtatcttc aaagatcggt tgatgcaatt gtagatgatc tggctttcac
     1321 ccaaaatata gatataagca agcaagaagt tgaaaaagta cttgacgtaa ttcaacaatt
     1381 cgatccagca ggaataggtg caattgacct taaagagtgc ttattaattc agattaaccg
     1441 tcaactggag gattcccctt ctgataagct ggagctcgca aaaaagatca ttaccagata
     1501 tttcaatgac ttcacaaaaa agcattatca gaagataata aaacgggcaa tgattagtga
     1561 tgaacagctt agagaagcta tggatgtaat actgaagtta aaccctaaac ctggtaattc
     1621 attaagcgaa acatcaaaag agaatcatta catcatcccc gattttacaa ttactaataa
     1681 tggtgataaa ctcgagcttt cactcaattc atggaacaat accgatctca aagtaaatgg
     1741 gtcgttttca aatatgatgg aaaatattgg aaaacaaaag aaaagcaaaa aacaacgcga
     1801 ggcctactct ttcataaaac aaaaagttga ttccgcacgt tggtttattg atgcaataca
     1861 gcaacgtcag aacaccctat actctacaat gaatgcaata atggagtatc agtacgatta
     1921 tttgcttaca ggggatgaca ctaaactaaa accaatgatt ctgaaggata ttgctgaaaa
     1981 agtaaatctt gatatttcca ctatttcacg agttgcaaac agtaagtatg tgcaaactcc
     2041 attcggcact ctattaatta agagcttttt tagcgagtct atgcaaaagg atgatggtga
     2101 aactgtatcc acgcgtgaaa taaaaacaat attgagaaat attattgatt cggaaaacaa
     2161 ggataaacct tttactgatg agtatcttac tactaaatta aaagaaaagg gctatcctat
     2221 cgcacgacgg accgttgcaa aatataggga acagcttaaa atacctgtag cacgattacg
     2281 taaagaacac atagttaagc aaacttgatt tattaatagc gataattgaa gaaatagtga
     2341 tgtt
//
LOCUS       DASCQP010000400         3393 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001481905, whole genome shotgun sequence.
ACCESSION   DASCQP010000400 DASCQP010000000
VERSION     DASCQP010000400.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3393)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3393)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3393
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001481905"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            84..1013
                     /locus_tag="QF480_06880"
     CDS             84..1013
                     /locus_tag="QF480_06880"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF014698.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HJN06323.1"
                     /translation="MKKQEISDDWGCIITPSNNEDIQKLEYNEIVYLFERYGALLFRG
                     FGFPPEKITTVTDQYTERYSGEAQRRPSRYGQKVVHDVDMSGMNMGRGVIGGASVGWH
                     SENGFSPTWPEVIWLYCVTPPEKGGKTMLCDGKALWEALSVKTKSFFTAQPVRYQLEI
                     PIGDKKPGKGIKPWFLNTIGTGDCYIDWDTGILHCTQLRFAVQEGRSGRDLCFSNHLY
                     IDLDTEPQIISRTMADGQEIPESIMEEIHQKADNLTFEHSWEKRDFVMVDNLRFLHAR
                     RAYEKDDPRELLLIQSERASFGYGSSLTRKSIN"
     gene            1060..1296
                     /locus_tag="QF480_06885"
     CDS             1060..1296
                     /locus_tag="QF480_06885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004294732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HJN06324.1"
                     /translation="MVQKKYDQAFMTAFDIGDAALGPDLKYESIQEWDSIGHMGLIAE
                     LEDSLDISMEMDDIIDFSSYEKGKEIIKKYNIDI"
     gene            1471..2535
                     /locus_tag="QF480_06890"
     CDS             1471..2535
                     /locus_tag="QF480_06890"
                     /inference="COORDINATES: protein motif:HMM:NF015983.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HJN06325.1"
                     /translation="MEKLKKFHDYVRKNNGQIGTKQRGIDLNFNNACNLTCKYCFTNS
                     PIGDHAKDTLDIDMVASLADQADELGIFEFDLQGGELLLRPELLFQVLEAIKPERFYL
                     YLTTNGYFLDKKMAKRLADANVGRVSVSIDSIDEKTHDEIRGRKDSWRRAMDGLKNIQ
                     EVGIDPYLNITVGHYNAFSEDIEMLCQYADDNNYTTLLNVAVPSGMWLKLDKMKEVIV
                     DEKDKERLIQLRKKHKNILRNIWNPFDKNYEGVLGCNTVNRMYVTPIGDVLVCPYVHV
                     KIGNVYEQSLKEIRDYGFSIKHFNEHSPLCLAGEDKEFIQKYMSNDGQSIFNPAIAKE
                     IFTEEDYVKPKDSTSIGELV"
     gene            2666..>3393
                     /locus_tag="QF480_06895"
     CDS             2666..>3393
                     /locus_tag="QF480_06895"
                     /inference="COORDINATES: protein motif:HMM:NF012711.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HJN06326.1"
                     /translation="MNIFREITTNNDISYIHSHGNDYSYNILIQDADRFSSFTINRPL
                     VFLLANNSYDCLTGYVGLLRANAVVALINDSIHESMFNDLVINFKPTFIYQPKNLFQC
                     EKDWEKKLKFGKYVLYKTNIEIDYEINGDLSLLLMTSGSTGSPEFVRLSHSNIYSNTK
                     SICEYLKINNNDVAITTLPISYSYGVSIINTHLFAGASLVLTDASLMEKEFWDLISRY
                     KVTTFSGVPYTFEMIKKLKFENIDL"
BASE COUNT         1184 a          493 c          656 g         1060 t
ORIGIN      
        1 taataaagat atttatatca aattatcttg taaatatttg aataattaaa ttatatttca
       61 tctaagaaac agaaagttaa aatatgaaaa aacaagagat ttccgatgat tggggatgta
      121 taattacacc ttccaataat gaggatattc aaaaactcga atacaatgag attgtctatc
      181 ttttcgaacg ttatggtgct cttctattta gagggtttgg ctttccacca gaaaaaataa
      241 ctactgtcac agatcagtat acagaaagat attcaggcga agcccagcgc cgccccagcc
      301 gttatggtca aaaggttgtt catgacgttg acatgagcgg tatgaatatg ggaaggggag
      361 taatcggtgg tgcgagcgta ggctggcata gtgagaacgg tttctcacca acttggccgg
      421 aggtgatttg gttatattgt gtaacgcctc cagagaaagg tggcaaaaca atgctttgtg
      481 acggtaaagc tctctgggaa gccctttcag taaaaaccaa aagttttttc actgctcagc
      541 cagtgcgtta tcaacttgaa atcccaattg gagataaaaa gccaggcaaa gggattaaac
      601 catggttttt aaataccatt ggcacgggtg attgttatat tgattgggat actggtatac
      661 tacattgtac ccaattaaga tttgctgtgc aggaaggacg ttctggaagg gatttatgtt
      721 tctcaaatca tctatatatt gacttagata ccgaaccaca aataattagt cgtacaatgg
      781 cggacggtca agaaattcct gaaagtatta tggaagagat tcatcaaaaa gcagataatt
      841 tgacttttga acactcttgg gaaaagagag atttcgtaat ggttgataac ctaaggtttt
      901 tacatgcaag acgtgcatac gaaaaagatg atccccgtga attattgctt atacaatcgg
      961 aaagggccag ctttggctat gggtcttcgc tgacaagaaa gagtatcaat tgattgcaac
     1021 aataggtctt aactaaacag aaattgacaa tggggaaaca tggtacaaaa aaaatatgat
     1081 caagccttta tgactgcttt tgatattgga gatgcagcat tggggcctga tttaaaatat
     1141 gaatccattc aagagtggga ttcaataggc catatggggt taatcgcaga gttggaggac
     1201 tcactcgata tcagcatgga aatggatgat atcattgatt tcagtagtta tgaaaaagga
     1261 aaagaaatca taaaaaaata taatattgat atttaattcg aaattttcat tgtactagtt
     1321 ggttttataa agtctgatta gtacattttt cccaatattt aataatacat atattcatat
     1381 aactacggta ttcttgtaat atcgataata ccgaccaaat atgtttgaga gaagagagct
     1441 gtcatcagat taattgataa accccgactc atggaaaaat tgaaaaagtt ccatgattat
     1501 gttaggaaga ataatggtca aataggtaca aaacagagag ggattgacct gaactttaat
     1561 aatgcctgca atttaacatg caagtactgt tttacaaatt cacccatagg tgatcatgcc
     1621 aaggatacat tagatataga tatggttgcc agtcttgctg atcaggctga tgagttgggt
     1681 atattcgaat ttgatttaca gggaggggaa ttattgctta ggcctgaact gttatttcaa
     1741 gttttagaag ccattaaacc ggaaagattt tatttatacc taacgaccaa tgggtacttt
     1801 ttagataaaa aaatggctaa aagattagcg gacgcaaatg tgggaagagt ttccgttagt
     1861 attgatagta ttgatgaaaa aactcatgat gaaattagag gccgtaagga ttcatggcgc
     1921 agggcaatgg atggtctaaa aaatattcag gaagttggta tcgatccata tctcaatatc
     1981 acagttggtc actacaacgc tttttctgaa gatatagaaa tgctctgtca atatgcggat
     2041 gataacaatt atacaacgct gcttaatgtt gcagtaccgt ctggaatgtg gcttaaactt
     2101 gataaaatga aggaagtaat tgtagatgaa aaagataaag aaagattaat tcaattaagg
     2161 aaaaaacata agaatattct aagaaacatt tggaatcctt tcgataaaaa ttatgaaggt
     2221 gtccttggtt gcaatactgt taatcgaatg tatgtaacac ctataggcga tgtgcttgtt
     2281 tgtccttatg tacatgtgaa aattggcaat gtttatgaac aatctctcaa agaaatacga
     2341 gactatggtt tcagtatcaa acatttcaat gaacatagtc cactctgctt agctggagag
     2401 gataaagaat ttatacaaaa atatatgagc aatgacggtc agtccatctt caacccggct
     2461 atagcaaagg aaatttttac tgaagaagac tatgttaagc ccaaagatag tacttcaatc
     2521 ggtgaattag tttaggctta aaacgaaata aactgtccta aaggattgtc ttttaagaat
     2581 ctatttcaca ttttttcttt ttatattatt tagtcttatt caacggtcaa gggtattgta
     2641 caaccaatat actttcttcg attaattgaa tatctttcga gaaataacca caaataacga
     2701 tatatcatat atacattcgc atggtaatga ttattcatat aatattttaa ttcaagatgc
     2761 tgatagattt agttcattca ctataaatcg gcccctggtt tttttactag caaataatag
     2821 ctatgattgt ttaactggtt atgttggatt gctacgcgct aatgcggttg tagcattaat
     2881 taatgattca atccatgaat caatgtttaa tgatcttgtt ataaatttta aacctacttt
     2941 catttatcaa ccaaaaaatc tctttcaatg tgaaaaagat tgggaaaaaa aattaaagtt
     3001 tggtaagtac gttttatata agactaacat cgaaatagat tatgaaataa atggtgattt
     3061 atcattgctc ctcatgactt cgggtagtac tggtagtcct gaatttgtta gactatccca
     3121 ttcgaatatt tatagcaata caaaatcaat atgtgaatat cttaaaatca ataataatga
     3181 tgtggcaatt actacgttgc caataagtta ctcatatggc gtttccatta taaatacgca
     3241 tttatttgca ggtgccagtt tggtattaac ggatgcatca ctaatggaaa aagagttttg
     3301 ggatttgatt tcaagatata aagtaacaac ctttagtggt gttccttaca catttgaaat
     3361 gataaaaaaa ctaaaatttg aaaatataga tct
//
LOCUS       DASCQP010000401         2020 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001486457, whole genome shotgun sequence.
ACCESSION   DASCQP010000401 DASCQP010000000
VERSION     DASCQP010000401.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2020)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2020)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2020
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001486457"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(56..1051)
                     /locus_tag="QF480_06900"
     CDS             complement(56..1051)
                     /locus_tag="QF480_06900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018336036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HJN06327.1"
                     /translation="MLNIDNWANPEYLYILLVIPLLITWYWFKNNKNTADLRFSGLQM
                     FNEIKPSPKTWLIHSLFIFRILAIGLIIIALARPQSISTKQNISIEGIDIVMSIDVSG
                     SMLARDFKPDRLEAAKDVANEFIARRPNDRVSLVIFSGEAFTQVPLTTDHTMISNIFD
                     EIQSGMIEDGTAIGDGLATSVSRLKDSDAISKVIILITDGVNNSGSVDPISAAEIASM
                     FGIRVYTIGIGSMGMAPYPVQTPFGIQMQQMKVQIDEELLQQIASMTGGRYYRADNNK
                     KLKEIYKEIDTLEKSKIDVQEFRKKHEAFVPFALLALALFSLEIILRYLVFRRIP"
     gene            complement(1052..>2020)
                     /locus_tag="QF480_06905"
     CDS             complement(1052..>2020)
                     /locus_tag="QF480_06905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06328.1"
                     /translation="IYISFLILSVLYINGVKAQQHGAWSSLDSNAIMIGDQVKYEIGI
                     TIPTDNIVTWPLLVDTITSNIEIIKRGSIDTTYLDTDMSLAQQFTITSFDSGYFTLPP
                     VEFKFKQLDDSAYFTTSTGTLFLQVFVPEVDTSNAFKPLVGPIKEPYTFRELLPWILG
                     IGVTLLLMALLIYYMVKRKKDQPVFKRKSKPASPAHIIAINKLEELRLNKVWQSGQLK
                     KYYSELTDIIREYMVNRYHFDAPEMTSFEILTKLHEFEINKDVRSKLDGVLYLSDMVK
                     FAKAVPTALENDLGLTHCVDFVNETKKIAEPIQMEENDSTNYKESQ"
BASE COUNT          632 a          369 c          316 g          703 t
ORIGIN      
        1 gttatttttg aagtggacaa cctaataatt gaataatatc cacctcagca ccctcttatg
       61 gaattcttct aaaaaccaga tatcgaagaa taatctccaa tgaaaataaa gctagtgcca
      121 gtaatgcaaa tggtacaaat gcttcatgtt tctttctgaa ttcctgaaca tcgatttttg
      181 atttctccag agtgtctatc tctttataaa tttctttaag ttttttatta ttatcagctc
      241 tgtaatacct tcctcctgtc atgcttgcaa tctgctgaag caactcttca tctatttgaa
      301 ctttcatttg ctgcatttga ataccaaatg gtgtttgtac agggtaaggg gccataccca
      361 ttgaaccaat cccaattgta taaactctaa ttccaaacat gctagctatc tcggcagcag
      421 aaataggatc aactgaaccc gaattgttaa ctccatcggt gattagaatg ataacttttg
      481 aaattgcatc tgagtctttt aatctgctta cagaagttgc taatccatca ccaattgcag
      541 tgccatcttc tatcattcca ctttgtattt catcaaaaat atttgatatc attgtatggt
      601 ctgttgttag aggcacttgt gtaaaagctt caccgctaaa aataacaagg cttactctgt
      661 cgtttggcct acgtgctatg aattcattag ctacatcttt tgcggcttca agtctgtcag
      721 gtttaaaatc tcgtgctaac atactaccgg aaacgtctat tgacataacg atatcaattc
      781 cttcaatgct tatattttgc tttgttgata ttgattgagg cctggctaaa gcaataataa
      841 taaggccaat agctagtatt ctgaatataa ataagctatg aattaaccag gttttaggac
      901 ttggtttaat ttcattaaac atttgaagac cggaaaacct cagatcggca gtatttttat
      961 tatttttaaa ccaataccaa gtaatcaaca atggaattac caagagtata tataaatatt
     1021 cgggatttgc ccaattatcg atattcaaca tttattggct ttctttatag ttagtactat
     1081 cattttcttc catttgtatt ggttctgcta ttttttttgt ttcattaaca aaatcaacac
     1141 agtgtgtaag ccctaaatca ttttcaagtg cagttggaac agcctttgca aactttacca
     1201 tatctgatag gtatagtaca ccatcgagtt tagaccttac atctttattt atttcaaact
     1261 catgtagttt tgtaagaatc tcgaaacttg tcatttcagg tgcatcaaaa tgatacctgt
     1321 tcaccatata ttctctaatt atgtcagtta gttcggagta atatttctta agttgtccgg
     1381 attgccaaac tttgttaagc ctcaattctt caagtttatt aatggctatt atatgagcag
     1441 gagatgctgg tttagattta cgtttaaaaa caggttgatc ttttttcctc ttaaccatat
     1501 aatatattag taacgccatt aatagtaaag taacaccaat acctaatatc cacggtaata
     1561 attctctaaa agtataaggt tctttaatag gtccaactaa aggtttaaat gcatttgatg
     1621 tatctacttc aggcacaaac acctgcaaga aaagagttcc agtggatgtt gtaaaataag
     1681 cactgtcgtc aagttgttta aacttaaact caaccggtgg tagagtaaaa tatccggaat
     1741 caaatgaagt gatagtgaac tgctgcgcta acgacatgtc agtatctaaa taggttgtgt
     1801 caatactacc tcttttaatt atttcaatat ttgatgttat agtatcaacc agcaaaggcc
     1861 aggttactat attatctgta ggaatagtta taccaatctc atatttcact tgatcaccaa
     1921 tcataattgc atttgaatcg agtgatgacc aggcaccatg ctgctgtgct tttaccccat
     1981 taatgtacag cacagacaaa atgagaaatg atatgtatat
//
LOCUS       DASCQP010000402         3028 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001491294, whole genome shotgun sequence.
ACCESSION   DASCQP010000402 DASCQP010000000
VERSION     DASCQP010000402.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3028)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3028)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3028
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001491294"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..198
                     /locus_tag="QF480_06910"
     CDS             <1..198
                     /locus_tag="QF480_06910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06329.1"
                     /translation="SVNEKSILEEIEQYLDSKINKLDISKKDYFETMEFSNESHSDWK
                     SLIQNSDDFEKRKKKKKKQKR"
     gene            complement(247..663)
                     /locus_tag="QF480_06915"
     CDS             complement(247..663)
                     /locus_tag="QF480_06915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013444521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HJN06330.1"
                     /translation="MSNKISVAWTGDMAFEAEVDNFKIKLDAEPKVGGNNTGPRPKPL
                     TLVALGGCTGMDVISILSKMRVKPDYFNVEVSGELTEEHPKYYHKIHVRYIFRGEDLP
                     LAKLKKAINLSQERYCGVNEMLRKSSIITHDIVIED"
     gene            846..>3028
                     /locus_tag="QF480_06920"
     CDS             846..>3028
                     /locus_tag="QF480_06920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06331.1"
                     /translation="MSTINITEKQSLTVRSLTIVKKILDENPEINEIISSSVSYEVAL
                     TKLREKLFSYLEANPAANNYYNNESSDSVKNLSWKDVGIIRLLNYIDYEGSSFLDPNR
                     KNIPKISRPIKNLYNAVKFGKGDCNRDFFLDLLFLFRQINGILKQKLPSEAKIKAWMS
                     KYPSGLSEKIIASRKENKNRILKVIIEQISSGEQISKRYFFDEGMSEKEKYKRALTWW
                     NDYRFHLRFAVRSPDQLNRMLDYSLRPHRLQILNAAQQAGIPFFINPYYLSLINVNIK
                     EGKTGSDRTIRDYVFHSRELVEEFGNIVAWEKEDVVEPGKPNAAGWLLPSFHNIHRRY
                     PEVAIFIPDTRGRACGGLCVSCQRMYDFQSGHLNFNLDKLTPKIKWKKKMKMLLEYFE
                     EDTQLRDILITGGDSFMNTEESLQDIFDGIYDMALRKKNANTDRPDGQKYAEITRIRL
                     GTRLPVYLPQRITKEFVKVLADFKRKASKIGIKQFIVQIHVQAAIEITPEMKEAVSRI
                     LAAGWMVTNQVVFTAAASRRGHTNKLRKVLNDIGVISYYTFSVKGFMENYHNFATNER
                     SVQEKTEEKIIGKLSKELLNQVADLYVDVEHAQKNLAEIRKAHKLLFLATDKNVLNMP
                     GVGKSMRFNTIGITNDGRRILEFGHDLKRRHSPVIDKMGKVVIIESKSIAAYLEQMEN
                     MGENPQDYSTIWGYSSSGSEKRVPVYNYPEYDFKITDKLTNFEEEG"
BASE COUNT         1092 a          489 c          537 g          910 t
ORIGIN      
        1 agtgtaaacg aaaaaagtat attagaagaa attgagcagt atttagattc aaaaattaac
       61 aaacttgata tctctaaaaa agactatttt gaaacaatgg aattttccaa tgaatcacat
      121 tctgattgga agtctttgat acaaaattca gatgatttcg agaaacgaaa aaaaaagaag
      181 aaaaaacaaa aacgatgata caatgcttca caacgttaat cgtttaattt gcttagctaa
      241 ataaatctaa tcttcaatta caatatcatg tgtaattatt gatgattttc ttagcatctc
      301 attcactcca caatatcgtt cctgtgacaa gtttatcgcc ttttttaatt ttgccaaagg
      361 aaggtcttca ccacgaaata tatacctgac atgtatttta tgataatact tagggtgttc
      421 ctccgttagt tctccactta cttcaacatt aaaataatca ggtttaacac gcatctttga
      481 aaggattgag attacatcca ttcctgtaca tccaccaagt gccacaagag ttaatggttt
      541 aggacgaggt ccggtattat tcccaccaac cttaggttcg gcatccaatt ttattttgaa
      601 gttgtcaact tcagcttcga aagccatatc gcctgtccag gctacactta ttttattact
      661 cataatattc tttttcaagg caaaaatata atttattaag gtagtttctt ccaaatatta
      721 aatatgtcat cgattaattt caaaatctgc tatttagcaa aacttgatta atatattcaa
      781 aatacttaac ttcgcaaacc tttttttcaa ccaataaaac aagaattgta ggagaactat
      841 tagatatgag cactataaat atcactgaaa agcaatcttt aactgttcgt tcattaacaa
      901 tagtcaaaaa aattcttgat gaaaatcctg aaataaatga gataatttct tcctcagttt
      961 cttatgaggt agcattaaca aaattgagag aaaaattatt ttcttattta gaagccaatc
     1021 cagcagctaa caactactac aataatgaat cttccgattc agtaaaaaat ctttcatgga
     1081 aagatgttgg tataattaga ttactaaatt atattgatta tgaaggctct tcctttctcg
     1141 atcctaacag aaaaaacata cccaaaataa gtcgtccgat aaaaaaccta tataatgctg
     1201 taaaatttgg caaaggtgat tgcaatagag acttttttct tgacctactt tttctattca
     1261 gacaaattaa tggtatatta aaacaaaaac taccctctga agctaaaatt aaggcatgga
     1321 tgtcaaaata tccttctggg ctatctgaaa aaataattgc cagccgaaaa gagaataaga
     1381 atagaatact aaaagtaata attgaacaaa taagctcagg ggagcaaata agtaaacggt
     1441 atttctttga tgagggaatg tcagaaaagg aaaagtataa acgggcatta acatggtgga
     1501 atgattacag gtttcattta cgatttgcag tcagatcacc ggatcagctt aatcgcatgc
     1561 ttgattactc attacgccct cacagattac agatacttaa tgctgcgcaa caggctggta
     1621 taccattttt tataaatcca tattatttgt cattaataaa tgtgaatatt aaagagggta
     1681 aaactggatc tgataggact atacgtgatt atgtttttca tagtcgcgaa ctggttgaag
     1741 agtttggcaa catagtagca tgggaaaaag aggatgtagt agaacctggg aaaccaaatg
     1801 cagccggttg gctactacct tcatttcaca atattcatag gcgttatccg gaagtagcca
     1861 tttttattcc tgatacccgc gggagggctt gtggtggctt atgtgtttct tgccagcgta
     1921 tgtatgattt tcagagcgga catctgaatt ttaaccttga taaactaact ccgaaaatta
     1981 aatggaagaa aaagatgaag atgttgttag aatattttga ggaagacact caacttcgcg
     2041 acatacttat taccggtggt gactcattta tgaatacaga agaatcgcta caggacattt
     2101 ttgatggaat ttacgatatg gcattaagaa agaagaatgc taatactgat cgtcccgatg
     2161 gtcaaaaata tgcagaaatt acacgtatta gactcggcac aagattacct gtatatcttc
     2221 cacaacgtat tacaaaagaa tttgttaaag tgcttgctga ttttaaaaga aaagcatcta
     2281 aaattggcat taaacagttt attgttcaaa ttcatgttca ggcggcgatt gaaataactc
     2341 ctgaaatgaa agaagcggtg tctcgaatat tagctgccgg atggatggtg actaaccaag
     2401 tagtttttac agcagctgct tcacgcaggg ggcatactaa caaactgaga aaagttctta
     2461 atgatatcgg agttatatca tattatactt tttctgtgaa gggatttatg gaaaactatc
     2521 acaactttgc aactaacgaa agatcggtac aagagaaaac tgaagagaag attatcggga
     2581 aattgagtaa ggaattgctt aatcaagtag ctgatttgta cgttgatgta gaacatgctc
     2641 aaaagaacct ggctgaaatc agaaaagcac ataaattact ctttttagca accgacaaga
     2701 atgtacttaa tatgccaggt gtaggaaaaa gtatgcgatt taacaccatc gggatcacta
     2761 acgacggcag aagaatttta gagtttggtc acgacctgaa acgaagacac agtcctgtga
     2821 ttgacaaaat gggaaaagtt gttataattg aatccaagtc gattgcagcc tatttagaac
     2881 aaatggaaaa catgggcgaa aaccctcaag attattcaac catatgggga tattcatcga
     2941 gtggctcaga aaaaagagtg ccagtttata attatccaga atatgatttt aaaatcactg
     3001 ataagttaac aaattttgaa gaagaggg
//
LOCUS       DASCQP010000403         3004 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001503389, whole genome shotgun sequence.
ACCESSION   DASCQP010000403 DASCQP010000000
VERSION     DASCQP010000403.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3004)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3004)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3004
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001503389"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..851
                     /locus_tag="QF480_06925"
     CDS             <1..851
                     /locus_tag="QF480_06925"
                     /inference="COORDINATES: protein motif:HMM:NF039390.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06332.1"
                     /translation="NYTVGFDETALIERSIEAINQIKIADYEAEVSSRSISTITEESI
                     EDEFGGKETYKLKAQFSALDLIEEISEDTGLCYPSVFKIVERINHNYFVKNPPQFIQQ
                     ASVIVRNIELEELLRGLDYHLLDETFPFDFEDFVKQVDYRAYTDTPKRGVYDRMLIDS
                     HVEHQFALATDNDDEVICFLKLPSYYKIQTPIGEYNPDFGIVMKRKSLRDGNESEFYF
                     VIETKGTNNINDKKSLKESEIYKIQCALKHFATLGVDVQYKAPVKDYQFFKTEANKTI
                     NTLIED"
     gene            909..1715
                     /locus_tag="QF480_06930"
     CDS             909..1715
                     /locus_tag="QF480_06930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004301479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005634 - nucleus [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KilA-N domain-containing protein"
                     /protein_id="HJN06333.1"
                     /translation="MKKITVQGNEITILKKGQDDFVSLTDMLKAKDGDFFISDWLRNR
                     NTVEFLGIWESVNNPAFNYGEFATIKSRAGLNNYKISVKEWEKKTNAIGLKATAGRYG
                     GTYAHIDIAFEFGMWISAEFKVYLIKEFKRLKEEESHRLNLEWNFQRTLSKVNYKIHT
                     DAIKERLIPDELSNKQTSIIYANEADVLNMALFGKTAKQWRDENPHKKGNIRDEASIH
                     QLVVLSNMESINAMLIHQNILQKERLIQLNELAISQMKSLVANINLNKLK"
     gene            1715..2887
                     /locus_tag="QF480_06935"
     CDS             1715..2887
                     /locus_tag="QF480_06935"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013704.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006306 - DNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HJN06334.1"
                     /translation="MENINDYMPFSNDWNKERLEKLKELMPDLFTNEGKINTNEFKKL
                     VDSESISETERYEFRWFGKSNAKREAFTPTDATLIYDEARSVNPTESDNLIIEGENLN
                     VLKLLSNSYREKVKCIYIDPPYNTGKDFVYSDKFNQDKKEYWEDAEVTENGYKIDTNT
                     ETDGRFHSNWLNMMYSRLLIARQLLREDGVIFISIDDNEVHHLRKLCDEVFGEENFLG
                     QVSRLTGTPTGQGTKGLVSELDYIIIYSKSNEGDFNGIEFDDDDKQIYNQSDEKGQYL
                     TRPLRKTGGEDKRDDRPSMYYSVVSPNKKDVYPIGPGGYESRWRCSLDKYKGLEAQGM
                     IEWKEINENDTLVWKPYLKFYLEGRLKQPSDLWKNMDGNKKASIDLKKLLDEIPMS"
BASE COUNT         1167 a          412 c          583 g          842 t
ORIGIN      
        1 caaattacac tgttggtttt gatgaaactg ctttaattga aagaagtatt gaagcaataa
       61 atcaaatcaa aattgcggat tatgaagcag aagtgagtag ccgttccatt agtacaatta
      121 cggaagaaag cattgaagat gaatttgggg gcaaagaaac atataagtta aaagcccaat
      181 tttctgccct tgacctgatt gaagaaatca gcgaagatac tggcttatgt tatccttcgg
      241 tttttaagat tgttgaaaga atcaatcata attattttgt aaaaaaccca ccacaattta
      301 ttcaacaggc atctgttatt gtgcgaaata ttgaattgga agaattgctc cggggattgg
      361 attatcacct tttagatgaa acctttcctt ttgattttga ggattttgtt aaacaagtag
      421 attatagggc ttatacagat accccaaaac gaggggtcta tgacagaatg ttgattgaca
      481 gccatgttga gcaccagttt gcacttgcaa ctgataatga tgatgaagta atttgttttt
      541 taaaacttcc atcttattac aaaatacaaa ctcctattgg cgaatataat cctgactttg
      601 gaattgtgat gaagcgtaaa agcttgagag acggtaacga gagtgaattc tattttgtga
      661 tagaaaccaa aggaacaaac aacattaacg ataaaaaatc acttaaagaa agtgagattt
      721 acaaaataca atgtgcattg aaacacttcg caacacttgg tgtggatgtg cagtacaaag
      781 ctcctgttaa agactatcag ttctttaaaa cagaagccaa caaaacgatt aatactttaa
      841 ttgaagatta atttatcatt ttcatgacgt aataaaaacg ataaaacaat attaagggaa
      901 tgagtaaatt gaagaaaata actgttcagg gaaatgaaat aaccatatta aaaaaagggc
      961 aagatgattt tgtttcatta actgatatgc ttaaagcgaa agacggagat ttttttattt
     1021 ccgattggtt acgaaacaga aataccgtag aatttttagg gatttgggaa tcagtaaata
     1081 acccggcttt taattatggc gaatttgcca caattaaaag ccgggcaggt ttaaacaact
     1141 ataaaataag tgtaaaagag tgggagaaaa aaacaaatgc aatcgggtta aaagctactg
     1201 caggaaggta tggtggaacc tatgcccata ttgacattgc ttttgaattt ggaatgtgga
     1261 taagtgccga atttaaagtg tatttaatta aagagtttaa acgattaaaa gaagaagaaa
     1321 gccatagatt gaatttggaa tggaactttc aacgaacatt atccaaagtc aattacaaaa
     1381 tacataccga tgccataaaa gaacgattaa tccctgatga attgagcaat aaacaaactt
     1441 ctattattta tgctaacgaa gcagatgtat tgaacatggc actatttgga aaaacagcaa
     1501 aacaatggcg tgatgagaat cctcataaaa aagggaatat cagagatgaa gcaagcattc
     1561 atcaattagt tgttttatcg aatatggaaa gcattaacgc tatgcttatt caccaaaata
     1621 ttttacaaaa agaaagattg attcaattaa acgaactggc tatttcgcaa atgaaatcgc
     1681 tggttgcaaa tattaacttg aataaactta aataatggaa aatataaacg actatatgcc
     1741 ttttagcaac gattggaaca aagaacgttt ggaaaaactt aaagagttaa tgccagacct
     1801 atttaccaat gagggaaaaa taaatacaaa cgaattcaaa aaattagttg attccgaaag
     1861 tattagcgaa acagaacgtt acgaattccg ttggtttgga aaaagtaatg caaaacggga
     1921 agcttttacg cctaccgatg ctacacttat ttatgacgaa gcaagaagcg taaacccaac
     1981 cgaaagtgat aacctgatta ttgaaggcga aaacctgaat gtgcttaaac ttttaagcaa
     2041 tagttaccgc gaaaaagtaa agtgcatata cattgaccca ccatacaata caggaaaaga
     2101 ttttgtgtat tccgataaat ttaaccagga caaaaaagag tattgggaag atgcggaagt
     2161 aacagaaaac ggctataaaa ttgacaccaa tactgaaacc gatggacggt ttcatagtaa
     2221 ttggctaaat atgatgtata gccgattgtt gattgcaagg caattacttc gcgaagatgg
     2281 cgtaatattt atttccattg atgacaatga agttcaccat ttaaggaaat tatgtgatga
     2341 agtttttggg gaggagaatt ttttagggca ggtaagtagg ttaactggaa cacctacagg
     2401 acaaggaaca aaaggattgg tttcagaatt agattacatt ataatttatt ctaaatcaaa
     2461 tgaaggtgat tttaatggaa ttgaatttga tgatgatgat aaacaaattt ataatcaatc
     2521 cgatgagaaa ggtcaatatt taactcgacc tttaagaaaa acaggaggtg aagataaaag
     2581 agatgataga ccaagtatgt attattcagt tgtttcccca aacaaaaagg atgtttaccc
     2641 aattggacca ggaggttatg aaagtagatg gagatgttct cttgataaat acaaaggact
     2701 tgaagcacaa ggaatgattg agtggaaaga aattaatgaa aatgatactt tggtatggaa
     2761 accatattta aaattttatc tcgaaggacg acttaagcaa ccatctgacc tttggaaaaa
     2821 tatggatggt aataaaaaag catctattga tttgaaaaaa ctattagatg aaatacccat
     2881 gagctaaaaa tagcacacca accgagaatg aatattgtgg gtaactttgt gacattgtct
     2941 cataaagtta acataaaatg gaaaaagaag aaatttcatt cgtacaggtt gtaaaagttg
     3001 gctg
//
LOCUS       DASCQP010000404         1805 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001505355, whole genome shotgun sequence.
ACCESSION   DASCQP010000404 DASCQP010000000
VERSION     DASCQP010000404.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1805)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1805)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1805
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001505355"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..787)
                     /locus_tag="QF480_06940"
     CDS             complement(<1..787)
                     /locus_tag="QF480_06940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease"
                     /protein_id="HJN06335.1"
                     /translation="MKRILILLFLIGITINSFAQIAPDKYYVQFTDKNDSPYSIDNPG
                     EFLTQRALDRRANQGIVISENDIPVNPQYLQGVAAIGVEMLNPTRWLNGVTVFTEDPA
                     LIAQIEALPYVSGTLKFNYSKKYTSDKFSEILDDSGNANSKLKGKNSISSLDYGLAFG
                     QIDQLNGIPLHDDGYQGQGKVIAVLDAGFTGANVHPVFDYLWENGKILGTKDFVYMGG
                     SVFDGHEHGKMVLSCMGANLPGEMIGTAPEADYWLLRSEEGPHE"
     gene            complement(843..>1805)
                     /locus_tag="QF480_06945"
     CDS             complement(843..>1805)
                     /locus_tag="QF480_06945"
                     /inference="COORDINATES: protein motif:HMM:NF013592.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family aminopeptidase"
                     /protein_id="HJN06336.1"
                     /translation="IAGPNTGRRVFIDAVYPDSVDSFDEAARFARESVKLMVDSLPGY
                     PFPYSHITSFCNGRKGGGMESPMMVNEGDPSNRSRAIGLIFHEITHSYFPFFMGINER
                     KYAWMDEGWASWLTYGILDQMDPDYNYFERISNSFSRLSGNEKEIPLMYPSYQIGDYN
                     AYRVHAYNRSAMAYAFLRNALGDSLFKVALRSFIYRWNGKHPIPYDFFNTFENVSGQD
                     LDWYIQPWFFERTYADLGIKKVTLDNKIVIENKGGLPLPVFIECHYTDSTITSFSYNT
                     GIWRRGDHAIVIQADTEKKIQRIVLGNKDIPDVIVENNEIVILE"
BASE COUNT          558 a          374 c          284 g          589 t
ORIGIN      
        1 tttcatgtgg cccctcttca gatcttaata accagtaatc agcttctggt gcagtaccaa
       61 tcatttcacc tggcaagttt gctcccatac atgagagtac cattttgccg tgttcgtggc
      121 catcaaatac actacctccc atataaacaa aatctttggt gcctaatatt ttaccattct
      181 cccataagta gtcaaataca ggatgaacgt tagcacctgt aaaaccagca tccagcacgg
      241 caattacctt tccctgacct tggtaaccat catcgtgtaa tggaatacca ttaagttgat
      301 ctatttgccc gaatgctaaa ccataatcca atgaacttat agaattcttg cctttgagtt
      361 tagagttagc atttcctgaa tcatcaagga tttcactaaa tttgtcacta gtgtattttt
      421 ttgaataatt aaacttgaga gtaccactaa cataaggtaa tgcctcaatt tgagcaataa
      481 gtgccgggtc ttcagtaaaa actgttactc catttaacca gcgagttggg tttagcatct
      541 caacaccaat tgcagctact ccttgaagat attgtggatt aacgggaata tcattctcgc
      601 taataacaat tccctggttc gctctgcgat cgagagcacg ctgagttaaa aattcacctg
      661 gattatcaat cgaataagga gaatcattct tgtcagtaaa ttgaacataa tatttatcag
      721 gtgctatctg agcaaatgag tttattgtta ttccaatcag gaagagaagt attagaattc
      781 gtttcatatt tattttttat tatgtgtatg ttctgacaaa ggtaataatg ttacggttgc
      841 acttattcca atataactat ttcattattt tcaactatta catctggaat atctttattt
      901 ccaagtacaa ttctttgaat tttcttttct gtatcagcct gaataacaat tgcatgatca
      961 cctctcctcc atattccagt attataacta aaggatgtaa ttgtgctatc agtataatga
     1021 cattcaataa acactggcaa aggcaatcct cctttattct caattacaat tttattatca
     1081 agtgttacct tttttattcc aagatcagcg taagttcttt caaaaaacca aggttgaata
     1141 taccaatcca gatcctgtcc tgatacgttt tcaaatgtgt taaaaaagtc gtatggaata
     1201 ggatgtttac cattccatcg atatataaaa ctacgtaaag ctactttgaa aagactatct
     1261 ccgagtgcgt tacgtaaaaa tgcataagcc attgctgatc gattgtatgc atgaacgcga
     1321 tacgcattat aatctccaat ttgataggat ggatacatta aagggatttc tttttcgtta
     1381 ccactcaacc tactaaaact attgctgatt ctctcaaaat aattgtaatc aggatccatt
     1441 tgatctaata tgccataagt tagccatgat gcccagcctt catccatcca tgcgtacttc
     1501 ctctcattga tacccataaa aaaaggaaaa taactatgtg ttatttcgtg aaaaataagc
     1561 ccaattgccc ggcttctatt tgatgggtcg ccctcattca ccatcattgg agactccatc
     1621 cctccacctt ttctgccatt gcagaaagag gttatatggg aatatgggaa tgggtatcct
     1681 ggtaaactat caaccattaa ctttacactt tctcttgcga atcttgcagc ctcatcaaaa
     1741 gaatcaactg agtcagggta aacagcatca ataaaaacac gtcttccggt gtttggacct
     1801 gcaat
//
LOCUS       DASCQP010000405         1950 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001505622, whole genome shotgun sequence.
ACCESSION   DASCQP010000405 DASCQP010000000
VERSION     DASCQP010000405.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1950)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1950)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1950
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001505622"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1855)
                     /locus_tag="QF480_06950"
     CDS             complement(<1..1855)
                     /locus_tag="QF480_06950"
                     /inference="COORDINATES: protein motif:HMM:NF013069.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HJN06337.1"
                     /translation="MKKLTQFSVNYPVTVSMMVVAIILLGYISFSRLGIDLLPDINAP
                     RIFIEITAGEKPPEEIEKQYIENIEAQSIRQKGVKQVSSVCMVGSAQITVEYNWGQDM
                     DEAFLDLQKALTSYSQNSDIDDFTISQHNPNATPIMIVGMLNSEITDMDELRLIGENY
                     IRNELIRLDGIADVVITGAEEKEVLIETNNYLLDAYGITAGQIVQQIQNINRNVSGGT
                     IVEMGKKYIIKGVSLIDNIDELKEVIIGYSQSNPDENSFQSNNETSYEKIPVFLKDVA
                     KVSFINKKPINIVRINGQRCLGLSIYKETGYNTVSAADELLESFKTIKKALPGYDFIV
                     IQNQGQFIRTAIDEVEETALLGALMAVFILYIFLRRLRVTAIISFVIPISVIATFNLM
                     YFNGLSLNIMTLGGLALGAGMLVDNAIVVVENIFRNMETGMTVKEAAINGTAEVGGAI
                     VASTLTTIVVFLPIVYLHGASGELFKDQAWTVAFSLLASLFVAILVIPMLFNFTHAKK
                     STKKVIKSVRFIWYGKTLSNILKFRFVVIIVAAIIVIGTIMILPFVGSEYLPRGGTNE
                     FSIDIKLKEGTELERTSKTVEAIELLIKETFLDKIETIYTTIGKASTETDKS"
BASE COUNT          591 a          386 c          290 g          683 t
ORIGIN      
        1 cagatttgtc tgtttctgtc gaagcttttc caattgtagt ataaattgtt tcaattttat
       61 ctaaaaaagt ttcttttatt agtaattcta ttgcttcgac agtttttgat gtcctttcga
      121 gttctgtacc ttctttcagt tttatgtcaa tactaaattc attggttcct cccctaggca
      181 gatattcgct tcctacgaat ggtagtatca ttatggtgcc tataacaatt atcgcagcaa
      241 ctattataac tacaaaccta aatttaagga tattggatag agtctttcca taccaaataa
      301 aacgtacaga ttttattact ttttttgttg atttttttgc atgagtaaaa ttaaatagca
      361 taggtataac cagaatggca acaaaaagtg aggccaataa tgaaaatgca acagtccatg
      421 cctgatcttt aaacagttct ccggacgctc cgtgtaggta aacgatgggc aaaaacacaa
      481 caattgtagt taatgtagag gcaacaatag caccgccaac ctcagccgta ccgtttatag
      541 cagcttcttt tacagtcatt cctgtttcca tatttctgaa aatattctca acaacaacaa
      601 ttgcattatc cactaacatc ccagctccta aagctaaacc accaagtgtc attatattta
      661 ggcttaatcc attaaaatac atgaggttaa aagtggctat aactgatatt gggattacaa
      721 aactgataat cgctgttacc cttagtcttc tcagaaatat atatagaata aatacagcca
      781 ttaatgcacc caataatgca gtttcctcaa cctcatcgat tgcagtacgg ataaattgtc
      841 cctgattttg aatcacaatg aaatcataac ccggtaatgc ctttttgatt gttttaaatg
      901 attccaacag ttcatcagca gccgaaacag tgttatagcc agtttccttg taaattgata
      961 agccgagaca acgttgtcca ttaatgcgta caatattaat cggtttttta tttataaaac
     1021 taactttggc aacatcttta agaaatacag gtattttctc ataactagtt tcattatttg
     1081 attgaaaaga gttttcatct ggatttgatt gactgtaacc aattataacc tcctttagtt
     1141 cgtctatatt atcaatgaga gaaacaccct taataatata tttctttccc atttcaacaa
     1201 tagtacctcc tgatacattt ctatttatat tttgtatttg ttgcactatc tgtccggccg
     1261 ttattccata tgcatctaat aagtaattgt ttgtttcaat caacacttcc ttttcttcag
     1321 caccggttat cacaacatca gcaataccat ctagccgtat aagttcgtta cgaatataat
     1381 tttctccaat tagccttaat tcatccatat ctgtaatctc agagttaagc attccaacaa
     1441 tcattattgg agttgcgttt ggattgtgtt ggctaatagt gaagtcatct atatctgaat
     1501 tctggctgta ggaggtaagg gctttctgca ggtcaaggaa tgcttcatcc atgtcttgcc
     1561 cccaattata ttcaacagtt atttgtgcag agcctaccat gcatacagaa cttacttgct
     1621 ttacaccttt ttgtcgaata ctttgcgcct caatattctc aatatattgt ttttcaattt
     1681 cttcgggagg cttttctccc gcagtaattt cgatgaatat tcgcggagca tttatatctg
     1741 gtaacagatc aataccaagt ctgctaaatg agatataccc cagaaggata atcgccacca
     1801 ccatcatcga aacagtaaca ggataattta ccgaaaactg agttagtttt ttcatagtcc
     1861 ttgctgttga tttcttaatc ttggttcgta attgataatc attttactac cttaacttta
     1921 gatctattac gtaaagtctc aaaccctttg
//
LOCUS       DASCQP010000406         3529 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001507247, whole genome shotgun sequence.
ACCESSION   DASCQP010000406 DASCQP010000000
VERSION     DASCQP010000406.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3529)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3529)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3529
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001507247"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..790)
                     /locus_tag="QF480_06955"
     CDS             complement(<1..790)
                     /locus_tag="QF480_06955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004305449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase N-terminal-like
                     domain-containing protein"
                     /protein_id="HJN06338.1"
                     /translation="MNKVVITGMGIYSTIGYNLEEVTKSLYEGKSGIIFDPARKDLGF
                     RSALTGCIDRPVLKGVLSRRMRVGISEQGEYAYIATMEALKNARIDDDFLDKNEVGIF
                     YGNDSSAKAVIEAADIMRVKKDTMLIGSASIFQSMNSTVTMNLSVILKLKGINFTVSG
                     ACASGSHSIGMGYFMIKQGLQDTIICGGAQEINALSMCNFDALNAFSIRESTPTLASR
                     PFDRDRDGLVPSGGAATVILESYESAVKRGAPILGEVIGYGFSSI"
     gene            complement(798..1526)
                     /gene="fabG"
                     /locus_tag="QF480_06960"
     CDS             complement(798..1526)
                     /gene="fabG"
                     /locus_tag="QF480_06960"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016274635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HJN06339.1"
                     /translation="MKYALVTGGSGGIGSAICIRLATMGYTVLIHYNSNISSSEKTLE
                     QIETDGGKAELIQFDVTNSEQIRNVLDNWKEEHPEDYIAILVNNAGTSKDALLVWMEE
                     DDWSSVINTNLNSFYYITSGLIKDMVIKKWGRIINIVSLSGLKGLPGQTNYSAAKAGI
                     IGATKSLAQEIGRKNITVNAVAPGYIKTDMTKELDEKELKKLIPVNRFGKPEEVADLV
                     AFLAGDDASYITGEVISINGGLYT"
     gene            complement(1533..2666)
                     /locus_tag="QF480_06965"
     CDS             complement(1533..2666)
                     /locus_tag="QF480_06965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06340.1"
                     /translation="MEEHEFDEIRPYNDQEIRSAIPRILADNAFHHMMDYLFTPEKKK
                     IVISNVKKANNITEFQRALTLEAVLSILDKTTEGITHSGFENINNLTNYVYLGTHRDI
                     VLDSSILGLVHLILDYKIPQSVWGSNLMVSPLVVDLGKSNQMITVFREGSPKELLLNS
                     QRLSTYIRKSIAELNKSVWIAHRKGRAKNGFDKTDVSILKMLTLSGDTDIKSWLTQLN
                     IVPVAMSYEWEPCDSMKVREIYLSMDSTYVKSDDEDLNSMIGGLTGEKGRIHLSLGTP
                     INNEILKIDNRNINNNEFISMVAEIVDNQIYNNYKLWPSNYLAYDLLNNSTEFNNNYN
                     DETRVILENRYAQTTKISQHENDDIRKIFLLLYANPLINKLKL"
     gene            complement(2804..>3529)
                     /locus_tag="QF480_06970"
     CDS             complement(2804..>3529)
                     /locus_tag="QF480_06970"
                     /inference="COORDINATES: protein motif:HMM:NF013696.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HJN06341.1"
                     /translation="KLNTFNGGNLRNAIAREAYAIVLIPKNKENEIVKAVADFKLMSK
                     AEFSITEPNMEITISEVPVPDAVIDEDSFDALTNAIYACPHGVVAMSQSIENFVETST
                     NLASVKFLKDEILIATNQRSSVESEKQDITNMVRSVFKLAGARIKTSDGYPGWTPNPN
                     SAIVNITKRSYIKLFNSKPEVLAIHAGLECGLIIDKYPDMDMISFGPTIKRAHSPEEK
                     IEISTVAKFWELTLDVLKNIPLN"
BASE COUNT         1053 a          668 c          557 g         1251 t
ORIGIN      
        1 caattgaaga aaaaccatag cctattactt cacctagtat cggagcacct ctcttaacgg
       61 ctgattcata gctttctagt attacggtag cagcaccgcc acttggaaca agtccgtctc
      121 tgtctcgatc aaagggccgt gaagctaaag taggagtaga ttctctaatg gaaaaagcat
      181 tgagagcatc aaaattacac atcgataatg catttatttc ctgtgcacca ccacaaatga
      241 tagtgtcctg tagtccttgt tttatcataa aatatcccat tccgatagaa tgtgacccac
      301 ttgcacaagc accgctaacg gtaaaattga tgcctttgag tttgagaatt acactcagat
      361 tcatcgtaac agttgaattc atagattgga aaatagaagc agaaccaata agcatagtgt
      421 cttttttaac tctcattata tctgcagctt caataacggc tttagcagag ctatcgttcc
      481 cataaaatat tccaacttcg tttttatcta ggaagtcatc gtcaattctt gcatttttaa
      541 gcgcttccat tgtagcaatg taggcatatt caccctgttc ggaaatacct actctcattc
      601 ttcgtgacaa tactcctttt aaaacaggtc gatcgataca gcctgttaat gcagacctaa
      661 aaccaagatc tttccttgca ggatcgaaaa ttattcccga tttgccttca tataatgatt
      721 tagtgacctc ctctaggtta tatccaatag ttgaatatat acccatgcct gttattacaa
      781 ctttattcat tctataatta agtgtatagt cctccgttta tacttataac ctcaccagta
      841 atataggatg catcatctcc agctaaaaaa gctacaagat cagctacttc ttcgggttta
      901 ccgaacctgt taactggaat aagtttttta agttcttttt catcaagttc tttggtcata
      961 tcagttttaa tatatccagg agcaacagca tttaccgtta tatttttacg tcctatttct
     1021 tgagcaagcg attttgtagc tcctataatc cctgcttttg cagcagaata gttcgtttgt
     1081 ccaggtaatc cttttaaacc tgatagagaa acaatattta taattctgcc ccattttttg
     1141 ataaccatat ctttgatgag tccagaagta atgtaataga agctgttaag gtttgtatta
     1201 ataacgctac tccaatcatc ttcttccatc caaaccaaca atgcatcttt cgatgtgcca
     1261 gcattgttaa caagtattgc tatataatct tcaggatgct cttctttcca gttgtctaat
     1321 acatttctta tttgttcact attggtaaca tcaaattgta ttagctccgc ttttccacca
     1381 tcggtttcaa tctgttcaag tgttttttca gatgatgaga tatttgagtt atagtgaata
     1441 agcacagtat agcccattgt tgctagacgg atacatatcg cactcccaat tcctcctgat
     1501 cctcccgtta ctaaagcata tttcatctat tcttacaatt ttaatttgtt gattaatggg
     1561 ttggcatata ataataagaa tatcttacga atatcatcat tttcatgttg agatattttt
     1621 gttgtttgtg cataacggtt ttctaaaata actctagttt catcgttata attattatta
     1681 aattcagttg agttgtttaa taagtcataa gcaagatagt tagaaggcca aagtttgtaa
     1741 ttattgtaaa tttgattgtc aactatctca gcaaccatag aaatgaactc attattatta
     1801 atatttcgat tgtcaatttt caggatctca ttatttattg gagttcccaa tgatagatga
     1861 atccttcctt tttcgcctgt taacccacca atcatactgt tgagatcttc gtcatcagat
     1921 ttaacatacg tagaatccat agataaatat atttctctta ctttcataga atcacatggt
     1981 tcccattcat aagacattgc cacaggtaca atatttagtt gagttagcca gcttttaata
     2041 tctgtgtcgc ctgataaagt taacattttg agtatactga catcagtttt atcaaatcca
     2101 tttttagctc ttccttttct atgtgcaatc caaactgact tgttcaattc agcgattgat
     2161 ttcctaatgt aagtagatag gcgctgagag tttaaaagta gctcttttgg gcttccttcc
     2221 ctgaaaactg taatcatttg attcgatttt cccaaatcaa caactaatgg tgaaaccata
     2281 aggttactac cccagactga ttgtggaatt ttataatcaa gtatgagatg taccagacca
     2341 agtatcgaag agtcaaggac tatgtcacgg tgggtaccta gataaacata gtttgtgagg
     2401 ttattaatgt tttcaaatcc tgagtgggta attccttctg ttgttttatc caaaattgat
     2461 agtacagctt ccaatgttaa agctctctga aattctgtta tgttatttgc cttctttaca
     2521 tttgatatta ctattttctt tttctcagga gtaaatagat aatccatcat atgatgaaat
     2581 gcattatcag caagtattcg tggtatagct gaccgaatct cctggtcatt gtagggtctt
     2641 atttcgtcga actcatgttc ctccatataa aaaaattatc accaaaatta accaattatc
     2701 cagaataaaa aaattattca tattgtcaaa tatcgatcga tctaaaacat gaaattgaaa
     2761 atttatccac ctgagttagg taagttttga atattatacc cagttaatta agaggtatgt
     2821 ttttaagcac gtctaatgtt agttcccaaa attttgcaac agtactaatt tcaatttttt
     2881 cttctgggga gtgagctctt ttaattgtgg gaccaaagga tatcatatcc atgtcaggat
     2941 atttgtcaat aattagccca cattcgaggc ctgcatgtat agcaagtacc tcaggttttg
     3001 aattgaataa cttaatgtac gatcttttgg taatattaac tattgcagag tttggattgg
     3061 gtgtccatcc agggtaaccg tcagatgttt ttattcttgc accggcaagc ttaaacacgc
     3121 ttcttaccat attagtaata tcctgttttt cagattcgac agaacttctc tgattagttg
     3181 caataagtat ctcatctttt aaaaatttaa cagatgcaag gtttgttgaa gtttcaacaa
     3241 agttttcaat actttgtgac atcgcaacca caccatgtgg acatgcatag attgcatttg
     3301 ttaatgcatc aaatgaatcc tcgtcaataa ctgcatcggg tacagggact tccgaaattg
     3361 taatttccat attaggctca gtgatactaa actctgcttt gctcattaat ttaaaatcag
     3421 ctacagcttt aacaatttcg ttctctttgt ttttaggtat tagtactatg gcatatgctt
     3481 cgcgagcgat tgcatttcga agatttcctc cattaaaagt gtttaactt
//
LOCUS       DASCQP010000407         5021 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001507650, whole genome shotgun sequence.
ACCESSION   DASCQP010000407 DASCQP010000000
VERSION     DASCQP010000407.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 5021)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5021)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5021
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001507650"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..151)
                     /locus_tag="QF480_06975"
     CDS             complement(<1..151)
                     /locus_tag="QF480_06975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004362633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2795 domain-containing protein"
                     /protein_id="HJN06342.1"
                     /translation="MYWTLELASELEDAPWPATKIELIEWSIRTGTAPEVIQNLREVE
                     DEGEAY"
     gene            complement(225..785)
                     /locus_tag="QF480_06980"
     CDS             complement(225..785)
                     /locus_tag="QF480_06980"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009162149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008817 - corrinoid adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="HJN06343.1"
                     /translation="MAKDLKIYTKTGDKGTTSLIGGTRVPKYDLRIECYGTVDELSAW
                     IGLIRDQDIDEKIMTDLIEIQDRLFTIETMLACDTSVNKKPLPEISEKDIRFLEDEID
                     LMNKELSSLRSFLLSGGNTIVSYCHIARTICRRAERLIIQLDTKHNVNPVILAYFNRL
                     SDYLFVLSRKVGKDNNTIETLWNPLV"
     gene            complement(802..1536)
                     /locus_tag="QF480_06985"
     CDS             complement(802..1536)
                     /locus_tag="QF480_06985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006843465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJN06344.1"
                     /translation="MQKNIIDFKNISRFFYVGTETVKALREVDIRIDKNEFVAIMGPS
                     GSGKSTMMNVLGCLDTPTEGTYHLNGQDVSKMTDNELAEVRNREIGFIFQTFNLLQRS
                     TARENVMLPLVYAGVNKSNRIQRAEDTLKSVQLTDRMNHKPNELSGGQRQRVAVARAL
                     VNNPSIVLADEPTGNLDSKTSIEILGLLEEIHELGNTIIIVTHEEDIAKHAHRIIRML
                     DGRIASDEVNMDVKTIKDYDLTEVNS"
     gene            complement(1621..2412)
                     /locus_tag="QF480_06990"
     CDS             complement(1621..2412)
                     /locus_tag="QF480_06990"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013742.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HJN06345.1"
                     /translation="MNKLLLLFRYLKYRLKAKTRYKVHSQFVFDFINNILRDKKDFTD
                     YSILWEHRNKMADNNDPVETVDFGVGAGKKAYSTKILKLGNIVRLRSLNESRLKLLYR
                     ITKFYRPENILEFGTAAGISSTYIKSGNPLSNMITMEGCANLAAKANESFRELGLSNI
                     DITVGNFDNTLKDVLKKIKKLDFVFFDGNHRKEPTLRYFEQCIHFSNENSIFVFDDIH
                     WSKGMESAWEYIKNDRRVSITIDLFWFGIIFFVEGVEKQDFVIRY"
     gene            complement(2462..4021)
                     /locus_tag="QF480_06995"
     CDS             complement(2462..4021)
                     /locus_tag="QF480_06995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06346.1"
                     /translation="MFNKLLLLFLLISAYSGYTQKLDAVRLEVPSDINVEQFHVETLN
                     DKGMLIFYESKEVNKEKLRKWYFGLFDIDLKQLWLKFVPLSDKIEFISSQNKNGNLYF
                     LFKNINRERFEYGFYEIVTYNIKKQSFSRITGSIPLKSEIAGFDIIGNTACIALNLKK
                     HETDLVFVNLNNGDVQPIHVDEGVPGYIEALHADEESNIFYVALKQNKDRRYISDQII
                     SFSPNGRKLSEIMVQGTEALKYFREYIFVPQKNNNVLIFGTYDIITGRTLSFKDIEEE
                     REAKSAGMFFLKIKDGKQKSLYYYDFMGFNNIMGAISPSNISTVKMQTDSLQSEHGKQ
                     LVSASFHLSEPIVFKSTNDIYLFSVEAYRPYYRTETRMDYDFYGRPYPYTYNVFSGYK
                     FYDVIIAGISPEGKLLWNNDFEIDNILTYSTRRNSVVFEDENYTTIAYVNDGYVVSQT
                     IEGPIDLNRSKMKIGTDFPQDRVSQDENNHIMHWYKDYFLIYGYQKLKNRTLGNQATR
                     IVFYANKITYQ"
     gene            complement(4138..>5021)
                     /locus_tag="QF480_07000"
     CDS             complement(4138..>5021)
                     /locus_tag="QF480_07000"
                     /inference="COORDINATES: protein motif:HMM:NF038128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="choice-of-anchor J domain-containing protein"
                     /protein_id="HJN06347.1"
                     /translation="GEYLFAGLEPNSSYSFTIFPYPNAGSNIDYKTDGTPPVANASIA
                     NITVINKETFSLGLGNWTQYSVIGDQVWEWSDIYGNPPGCAVMNGYSGGPVPNEDWLI
                     SPSLDLEGFVDITFGFDHARNYGSNEDLFIMISTDYDGVSDPNTGTWEDITSDYTFPD
                     PGSWTFNDAGIGDISAYASNSTYIAFLYNSTASDAATWEVDNAEVLGVLSTGISDKNL
                     TKLNVYPNPASNKINIEVKESGLFKITDITGKLMIDGGIILGNNTIDIDILNRGLYIV
                     ETISTNGVKSIGKFIVR"
BASE COUNT         1610 a          952 c          707 g         1752 t
ORIGIN      
        1 catatgcctc accttcgtct tctacttccc taaggttttg aataacttct ggagcagtac
       61 ctgtacgtat tgaccattct atcaactcaa tcttggtcgc tggccatggc gcatcttcaa
      121 gttctgatgc taactctaaa gtccaataca ttatcttaat ttttttgcaa aagtaattta
      181 tttttgaaaa aacacaaata aaatcaagaa atgttattaa acctttaaac aagggggttc
      241 caaagtgttt ctatggtatt gttatccttt ccaacttttc tggaaagaac gaataaatag
      301 tctgacagtc tattgaagta tgctaatatt acaggattga cattatgctt tgtatctaac
      361 tgaattataa gccgttctgc tcttcggcaa atagtacgag caatatgaca atatgaaaca
      421 attgtattac cacccgaaag caaaaatgat cttaaggacg ataattcttt attcatgagg
      481 tcaatctcat cttctaaaaa tcgaatatct ttctcggata tttcaggtaa tggtttctta
      541 tttactgaag tatcacatgc gagcatcgtc tctatagtaa acaatctgtc ctgaatttca
      601 attagatcag tcatgatctt ttcatcaata tcctgatccc taattaaacc aatccaggca
      661 cttaattcat ctacagtgcc atagcattct attcgtaaat cgtattttgg aacacgagta
      721 cctccaatta atgacgttgt tcctttatca cctgtttttg tatatatttt cagatctttt
      781 gccatagaga agtttaatca actaactatt tacttcagtc aaatcatagt ctttaattgt
      841 tttaacatcc atatttacct catctgatgc aatacgtcca tctagcattc tgataatacg
      901 atgtgcgtgt ttggcaatat cctcttcatg agttacaatt attatcgtgt tacccaactc
      961 atgaatttct tcaagtaatc ctagtatctc tatagaagtt ttagagtcca gattacctgt
     1021 tggttcgtca gcaagaacga ttgatggatt attaactagt gctcgagcaa cggccactcg
     1081 ctgtcgctgc ccaccagaaa gttcattagg tttatgattc attcggtcag taagttgtac
     1141 acttttaagc gtatcttcag ccctctgaat cctatttgac ttatttacac cagcataaac
     1201 aagtggtagc attacatttt cacgtgcggt ggatctttgt aataaattaa atgtttgaaa
     1261 aataaatcca atttccctgt tccgcacctc agctaattcg ttatcagtca ttttactaac
     1321 atcctgacca tttaaatgat aagtgccttc agtaggtgta tcaagacaac ctaatacatt
     1381 catcatagtt gacttaccag atcccgaagg tcccataatt gcgacgaact catttttatc
     1441 aatgcgtatg tctacttccc taagagcttt tactgtttcg gtgccaacat aaaaaaaccg
     1501 tgatatattt ttaaaatcaa ttatattctt ttgcatctgt gatttaagtt taaaaattaa
     1561 ttaaatcgaa aaatagtaaa ctgtttaata atctacatct cctatataat atcttattag
     1621 ttaatagcgt ataacaaaat cctgtttctc aactccttcg acaaaaaata ttattccgaa
     1681 ccaaaacagg tcaattgtaa tacttactct tctatcattc tttatatact cccaggcact
     1741 ctccatacct tttgaccagt gaatatcatc gaaaacaaat atactatttt cgtttgaaaa
     1801 atgaatgcat tgctcaaaat atcttaacgt gggctcttta cgatgattac catcaaaaaa
     1861 aacaaaatct aactttttaa tcttttttaa tacgtctttt aatgtattat caaaattccc
     1921 tacagtgata tcaatattag ataatcctag ttccctgaat gactcatttg ctttagcagc
     1981 cagattggca cagccctcca ttgttatcat attacttaaa gggtttccgc tcttaatgta
     2041 agtagaactt attccggcag cagttccaaa ctcaagtatg ttttcgggtc tataaaattt
     2101 tgtgattctg taaagtaact ttagtcttga ttcattgagt gagcgcagac gcacaatatt
     2161 gccaagtttc agtattttag tactatatgc tttttttcca gcacctacac caaaatcaac
     2221 ggtttcaaca ggatcattat tatcagccat tttattgcgg tgctcccata aaatactgta
     2281 atcagtaaag tcctttttat ctcgtaatat attgttaata aaatcgaata caaattgtga
     2341 atgtaccttg tatcttgtct tcgcttttaa acggtatttt aaatacctaa ataataaaag
     2401 tagtttattc atgtgctatt gcttgtgttg ttcaccaata acttttacaa attaatacat
     2461 attattgata tgtgatttta tttgcataaa aaacaattct tgtggcctga tttccaaggg
     2521 tacggttttt aagtttttga tatccatata ttaaaaaata gtctttatac cagtgcatta
     2581 tatgattgtt ttcatcttgt gagactctat cctgagggaa atcagtgcct attttcatct
     2641 tagatctgtt aagatcaatc ggaccttcaa tagtttgtga aacaacgtaa ccatcattaa
     2701 catatgctat tgtagtataa ttttcatcct caaaaactac tgagtttcgt cgggttgagt
     2761 aagttagtat attgtcaatt tcgaaatcat tattccataa taacttacct tcgggagaaa
     2821 taccagcaat aatgacatcg taaaatttat atccgctaaa aacgttatat gtatatggat
     2881 atggtctgcc gtagaaatcg taatccattc tcgtttctgt cctgtaataa ggtctatatg
     2941 cttcaactga aaatagataa atatcattcg tagatttaaa tactattggc tcgcttaaat
     3001 gaaacgaagc tgatactaat tgtttaccat gttcagattg taaactatca gtttgcatct
     3061 taacagttga aatattactt gggctgattg cccccataat attattaaaa cccataaaat
     3121 cataatagta aagtgatttc tgcttaccat ctttgatttt caggaaaaac atacctgcac
     3181 ttttggcttc tctttcttcc tctatatctt taaatgataa tgttcgaccg gtgatgatat
     3241 cgtacgttcc aaatattaaa acattattat ttttttgagg aacaaaaata tactctctga
     3301 aatattttaa tgcctctgta ccttgaacca taatttccga cagttttcta ccattagggg
     3361 aaaaactaat tatttgatct gatatatatc ttctatcctt attttgcttt agcgcaacat
     3421 agaaaatgtt actttcctcg tctgcgtgca gagcctcaat ataccctggt acaccttcat
     3481 ctacatgaat aggttgcaca tctccattat taagatttac aaaaacaagg tcggtttcgt
     3541 gcttttttag atttaatgca atacaagctg tatttccaat tatgtcgaaa cctgctatct
     3601 cagactttaa gggtattgaa cccgtgatgc gtgagaaaga ttgtttttta atattatagg
     3661 ttactatctc ataaaaacca tattcaaacc tctctcgatt aatattttta aataaaaagt
     3721 aaaggtttcc atttttattc tgtgaagaaa taaactcgat cttatcagag agaggtacaa
     3781 acttcaacca aagttgttta agatctatat caaacaatcc aaaataccat tttctcaatt
     3841 tctctttgtt aacctcctta ctttcgtaga aaattaacat tcctttatca ttcagtgttt
     3901 caacatggaa ttgttcaaca tttatatcag aaggaacctc aagtcttact gcatctagtt
     3961 tttgagtata accagaatag gcagaaatca ataaaaagag caataataat ttgttaaaca
     4021 ttttccaatc cgtttattta ttttgtaacg gctaaaacct gataaaatta caaagaaagc
     4081 aaaaaccctg ccgacaatat tgtgctaaca gggtttcata aatcaccaaa gaacatacta
     4141 tcgtactata aacttaccga tagatttaac tccattagta ctgatagttt caacgatata
     4201 taatcctcta ttaagtatgt caatatcaat tgtattattt cccaaaataa ttcccccatc
     4261 aatcattagc ttacctgtaa tatcagttat cttgaataat cccgattcct ttacttctat
     4321 attaatttta tttgaggccg ggttcggata aacattaagt tttgtaaggt ttttatcact
     4381 tattcctgta cttaaaacac ctagtacttc agcattatca acttcccagg tagcagcgtc
     4441 acttgctgtg ctattatata aaaatgctat ataagtagag ttacttgcat aagcagaaat
     4501 atcacctata ccagcatcat taaacgtcca actacctgga tcgggaaaag tgtaatcact
     4561 agtaatatct tcccacgttc ctgtattagg atcactaact ccatcataat ctgttgaaat
     4621 cataataaat aaatcttcat ttgatccata atttcgggca tggtcaaatc caaatgtaat
     4681 atcaacgaaa ccttcaagat caagtgatgg ggaaattaac cagtcttcat taggaacagg
     4741 acctccgcta tatccattca tcactgcaca tccaggtgga ttgccatata tatccgacca
     4801 ctcccaaacc tgatctccga taacactata ttgagtccag tttccaagtc ctaaagaaaa
     4861 ggtctcttta ttaattactg taatatttgc aatagaagca tttgcaacag ggggagttcc
     4921 atcggtttta taatcgatat tggaaccagc atttggatag gggaatatcg taaaagagta
     4981 tgaactattt ggctcaagtc cggcaaataa gtattcacca a
//
LOCUS       DASCQP010000408         2176 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001511765, whole genome shotgun sequence.
ACCESSION   DASCQP010000408 DASCQP010000000
VERSION     DASCQP010000408.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2176)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2176)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2176
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001511765"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..530)
                     /locus_tag="QF480_07005"
     CDS             complement(<1..530)
                     /locus_tag="QF480_07005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005640427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008661 - 1-deoxy-D-xylulose-5-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase
                     N-terminal domain-containing protein"
                     /protein_id="HJN06348.1"
                     /translation="MTPKSGTILSKINSPSDLKKLMDSELIQLSDELRSFILDVVSVH
                     PGHLGSSLGVVELTIAIHYVFNTPFDRLIWDVGHQAYGHKIITGRRDLFYTNRQYKGI
                     GGFPIREESEYDAFGTGHASTSVSAALGMAEASKLKGESNRKHIAVIGDGALTGGMAI
                     EGMNNAGATNADILIIL"
     gene            complement(581..1342)
                     /locus_tag="QF480_07010"
     CDS             complement(581..1342)
                     /locus_tag="QF480_07010"
                     /inference="COORDINATES: protein motif:HMM:NF014590.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1295 domain-containing protein"
                     /protein_id="HJN06349.1"
                     /translation="MISEYLFSILLYIWIAIAIVTFPVLLFVTAPYGRHSTNTWGARI
                     GNRLGWFLMEIPVVIVFSWFFFTGTAAKTIPVYIFYGLFMLHYANRIFIYPFRMKTTG
                     KQMPWIIVILAVFFNIFNGFFNGYWFGYLTPTYDISWLLDPRFIIGVVLFFIGMYINI
                     SSDNILLSLRKGKKTGYYIPYGGLFKYISSPNLFGEVIEWMGWAIMSWCLPGFAFAIW
                     TMANLIPRALDHHRWYQRKFKAYPQDRKAIIPTVL"
     gene            complement(1345..2076)
                     /locus_tag="QF480_07015"
     CDS             complement(1345..2076)
                     /locus_tag="QF480_07015"
                     /inference="COORDINATES: protein motif:HMM:NF027681.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HJN06350.1"
                     /translation="MFDINVLGTQNIVNSAMNVGVKKLIHFSSIHALVHKPYNHPMDE
                     SREIATDSPISYERTKAIADKWVMEQHNDNLEIVVLNPTAIIGPNDTKPSFMGEFMKL
                     IYAGNLPGLVPGGYDWVDVRDVAEAAITAIEKGRGGERYILSGKWLSIKNFADIFVEY
                     SDKNKYLSVLPLWLARLGVPFMWIFSKLTGKTPVYTYGSLEILKSNNRFISSDKAQLE
                     LGFKPRPLKETIFDTYSWYKENNYL"
BASE COUNT          736 a          421 c          341 g          678 t
ORIGIN      
        1 agaattatga gaatatcggc attagttgct ccagcattgt tcataccctc aatagccatt
       61 ccacctgtaa gtgcaccatc gcctattact gcaatatgct ttcgattgga ttctcccttt
      121 agtttagaag cttcagccat acctagtgcc gccgacacag aagtggaagc atgtccagta
      181 ccaaaagcat cgtactcact ttcttctcga ataggaaacc cgccaatacc cttatattgt
      241 ctgtttgtat aaaataaatc ccttctgcct gtgataatct tatgaccata tgcctgatgg
      301 ccaacatccc agataagccg atcgaaagga gtgttgaaaa cataatgtat agctattgta
      361 agttccacaa ctcctaaact tgagcctaaa tgccccggat ggacagaaac tacatcaagg
      421 ataaaacttc taagttcatc agaaagttga attaattcag aatccattaa ctttttcaag
      481 tcgctaggtg aattaatttt tgataatatg gttccagatt ttggtgtcat gtcattagta
      541 agtttgcaaa attacaagaa ttgacaaaac acaagaattg ttaaagaaca gttggtataa
      601 ttgcttttct gtcttgggga tatgccttaa attttctttg ataccatcta tgatgatcca
      661 gtgctcgagg tattaaattt gccatagtcc aaattgcaaa cgcaaaacct ggtaaacacc
      721 aactcattat ggcccaaccc atccattcaa ttacttcacc aaataggttg ggtgatgata
      781 tatatttaaa taacccgcca tatggaatat aataacctgt ttttttgcct tttcgtagac
      841 taagcaaaat attatctgaa gaaatattga tgtacattcc aataaagaat agtacgacgc
      901 caataataaa tctaggatct aacaaccaag aaatgtcata agtgggagtt aaatacccaa
      961 accaatatcc attaaaaaaa ccattaaaaa tgttaaaaaa tacagctaga ataactatta
     1021 tccatggcat ctgcttacct gttgttttca ttctaaatgg ataaataaaa atacgatttg
     1081 cataatgaag cataaaaagg ccataaaaaa tataaaccgg aattgttttt gctgctgtac
     1141 ctgtaaaaaa gaaccatgaa aaaacaatta caacagggat ctccattaaa aaccacccta
     1201 atcgattacc gattcttgct ccccaagtat ttgttgaatg cctaccgtag ggagctgtta
     1261 caaataataa aaccggaaaa gtaactattg cgattgcaat ccaaatgtaa agtagtattg
     1321 aaaacaggta ttcggaaatc atggttaaag ataattgttt tccttatacc aactataagt
     1381 atcgaatatg gtttccttga gtggcctagg tttaaaacca agttcaagtt gtgccttatc
     1441 agatgagata aatctgttat tagattttaa tatttctaat gaaccgtatg tgtaaactgg
     1501 tgtttttcca gtaagttttg agaatatcca cataaaaggc actcctaatc tggccagcca
     1561 caaaggtagc actgataaat atttattttt atcactgtat tcaacaaaaa tatcagcaaa
     1621 attctttata cttaaccact tacctgaaag gatgtatcgc tcaccccctc ttcctttttc
     1681 aattgcagta atagctgctt ccgcaacatc acgtacatca acccaatcat atcctcccgg
     1741 aaccaaacca ggaagattac cagcatatat taatttcata aactctccca taaaagatgg
     1801 tttagtatca ttggggccaa ttatagctgt tgggtttaat acaactatct caagattatc
     1861 gttatgctgt tccatcaccc acttatctgc aattgctttt gttctttcat aactgatagg
     1921 tgaatctgta gcaatttccc tactttcatc catcgggtga ttatagggtt tgtgaaccag
     1981 agcgtgaatt gagctaaaat ggattaattt tttaactcct acattcattg cagaatttac
     2041 aatgttttgt gtgcctaaga catttatgtc aaatatttat ttatccgaat ccgatcagat
     2101 agagataagt gcagcacaat gaaaaactac ttaagctcct tcacaaagtt gttttaatga
     2161 ttcaatattt tgaaag
//
LOCUS       DASCQP010000409        10112 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001512586, whole genome shotgun sequence.
ACCESSION   DASCQP010000409 DASCQP010000000
VERSION     DASCQP010000409.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 10112)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10112)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10112
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001512586"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..415)
                     /locus_tag="QF480_07020"
     CDS             complement(<1..415)
                     /locus_tag="QF480_07020"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: protein motif:HMM:NF014641.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004852 - uroporphyrinogen-III synthase
                     activity [Evidence IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HJN06351.1"
                     /translation="MKVKNILVSQPEPADMGKSPYGELCKKFNVNIDFHKFITIEGIG
                     AQEFRKAKGTFNEHTAIILTSRHAVDHFFRMAKEMRFEIPDSLKYFCISESTAYYLQK
                     YVQYRKRKIFYGKQNFADLINVIKKHSEEKFLVPSS"
     gene            complement(472..1281)
                     /locus_tag="QF480_07025"
     CDS             complement(472..1281)
                     /locus_tag="QF480_07025"
                     /inference="COORDINATES: protein motif:HMM:NF025459.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4271 domain-containing protein"
                     /protein_id="HJN06352.1"
                     /translation="MLDSLQYQVNELVISDSVNVNFPIEDSSTLSKPIVVNFFQNEGI
                     DISPILHLYNSNTDVIAYVLLILLGIISTIWYFMPDRFSTIFSIRSESNLSRSGNSLT
                     KVHGTLVMGFLWLNFVISTCIFILILLQRFFEKDIVGITDFEILGYIFLLLIGLLLYR
                     FIIIFAAGAIFQTQKLKRLQVIIGLNTNFITGVLLVPITLVVLYTGVNFFIYIGIAVI
                     VILQVYRLLKTVIIGKSSVIFSALHIILYLCTLEIVPVLVLMRLIGNASDI"
     gene            1439..2023
                     /locus_tag="QF480_07030"
     CDS             1439..2023
                     /locus_tag="QF480_07030"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: protein motif:HMM:NF001381.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0019205 - nucleobase-containing compound
                     kinase activity [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HJN06353.1"
                     /translation="MLNIIIFGPPGCGKGTQSVRIAKRYNLLHISTGDIIRNEIKSGS
                     KFGIQLKTIVEKGELVPYELIIKILESALVKNKNTEGYIFDGYPRTIKQAIDLDKILK
                     KENETISMVLGLKVGDDKILNRLLKRAKVEGRKDDTEDVIKNRLKIYRDETCPLIHWY
                     EERGKFIELMGDCSIDEIFEQTCQLIDSKLEVTV"
     gene            complement(2092..3285)
                     /locus_tag="QF480_07035"
     CDS             complement(2092..3285)
                     /locus_tag="QF480_07035"
                     /EC_number="2.7.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012573182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008776 - acetate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006085 - acetyl-CoA biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HJN06354.1"
                     /translation="MKIIVLNCGSSSIKYQLFDMPSSKTIAKGLVDKIGLKGSGIKHI
                     QGDKDPVIIEGEILDHKQGIEYLLGILISEKYGSLNKVEEIQAVGHRVVHAAEEFSGS
                     VLINDKVIHALEKSTELAPLHNPPNLEGIYAMQQLLPEVKHVGVFDTAFHQTIPEHVY
                     LYAIPYVLYEKYKIRKYGFHGTSHKFVSARACDILKVDISDQKIITCHLGNGSSMAAI
                     SNGKSYDTSMGMTPTEGLIMGTRTGDLDPGALLYIADKEDISNNYTNTLINKFSGLLG
                     ISGISSDMRDIEGAAEDGNHRAQLALEMFAYRVKKYIGSYSAALGGVDIIVFTGGIGE
                     NDTKTRNRVLSDLEFMGVFIDAQKAKIRGKEAVISQDDSPVKVLVVPTDEELMIARDT
                     FDLVC"
     gene            complement(3316..4275)
                     /locus_tag="QF480_07040"
     CDS             complement(3316..4275)
                     /locus_tag="QF480_07040"
                     /inference="COORDINATES: protein motif:HMM:NF014757.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase family protein"
                     /protein_id="HJN06355.1"
                     /translation="MDQLTDFRLGDKLKPKGKIHSVGIVGCGSVGQSITLLVARYGME
                     VIFVDVSEDRINDIFLMLEDQLNDEINHWGITPSEKRLVLSRIHGTTNLNELANCDVV
                     IEAIGSRKEGTMKESRKDVFRKIEDVVHYDAIISSNISTLMISDLAEVLKNPGRAIGM
                     HFIEPIDKTNIVEVVKGINSTSEANEQVIRFCQMINKKGVSVRESPGNISTRMIIPII
                     NEACEILMEGIASVEDIDLTIRETLGHNVGPFELADKIGLDKVLKYMENLYAEYGDNK
                     YKASPVIKRLVRVNYLGRYVGRGFYNYENEKPVSSNIINAVIK"
     gene            complement(4582..7266)
                     /locus_tag="QF480_07045"
     CDS             complement(4582..7266)
                     /locus_tag="QF480_07045"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024938.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HJN06356.1"
                     /translation="MPIKKLDSIFRPKRIAIIGLSNDPNSVGSLTLKNLVGGGFQGVV
                     YPINPNREAVMGIPCYPNIESLPKKPDLAVIMTAAKQVPEIIVNCGKAGINGVIVMSA
                     GFKESGEKGKLLEVKLKKQIDKFPDMRVIGPNCLGVIVPKAKLNLSFANGMPRQGKVA
                     FISQSGALCASVLDWADDTKIGFSYFISIGNAVDVTFGDLIDYLGQDTNTKSIILYVE
                     SLANARSFMSAARAFARKKPIIVYKSGRFPESAAVAASHTGALASEDAIYDAVFRRAG
                     LARVYDIGNIFDITDLVGRKRIPKATGLAIVTNAGGPGVMATDTIISLGGRLEPLSEE
                     TMSKLNQLLPPYWSHGNPIDVLGDATPKRVSQAISIVLNDKYIDAVLIILTPQAMTNP
                     TAIAEAIVEISAQTSKFIMAAWLGGTSMHKGLDILTSAEIPVYNTPEQAMRSFMTMTQ
                     YMKNLELLYETPKDVPVAFNYDRESLREKYIGRIFRKSKVLSEDDSKLLINDYGISTT
                     HPELALTEDDAVDIANRKGYPVVLKISSPDITYKSEVGGVALNLETEEIVRATYKNML
                     ETIGAKVPDANIIGITVQKMINRKDDIEMIIGIKKDSLFGTIMLVGMGGTSAELFNDK
                     RLEFPPLNEQLARQMLKSLQIYPLLEGYRGSKPKNIDKLIEVLIRISYLAADYPEIEE
                     LDINPLIVTSEDVIALDARIVVDNDSPSKANADYSHLILRPYPERLRKMSKLKDRTDV
                     LLRPIKPEDESLWLEMLGSCSKESIYHRFRYDFHFNSHEVATQFCYIDYDREMGIVAE
                     IDYEDRKRLIGVGRLIADPDVVNAEYAVLVADDWQHNELGYILTQYCVEIAGIAGIKR
                     VSAETTKDNKAMISVFKKLNFKVHFNDDTTVTVFKDLK"
     gene            complement(7417..8718)
                     /locus_tag="QF480_07050"
     CDS             complement(7417..8718)
                     /locus_tag="QF480_07050"
                     /inference="COORDINATES: protein motif:HMM:NF019310.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OFA family MFS transporter"
                     /protein_id="HJN06357.1"
                     /translation="MKNQRVMNRGLVVLGAILIQLALGAIYAWSVFTPSLTAEGWAKA
                     DTQWVFAIGLASFAVFMVIAGKRLNTYGPQKLTIIGGIILGLGYLLAGLFGGTNFIAL
                     LILLGLVGGAGIGLAYVVPIAVGMRWFPDKKGMITGLAVAGFGFGAMFWVKLAGSWGH
                     LINNFGLSSTFIIYGIAFAVMVIIGGMWMKFPPVGWKPDGYKEETAADLESNDDKEFA
                     SNEMLSKVQFYLIFFAFVVSAGAGLMSIGLMKLYPMEALQANGYSIAEASAIAGTAMA
                     VFFSLANGIGRIVWGTLSDKLGRKTSIIIMTATQGLLVIMFTYMAGNEVLLYLGATLI
                     GFNFGGNFALFPTITADTFGAKNVGQNYPFVFLAYGVGGILGPILGGMMGDIGNFSLA
                     FTISGFAVLAGTVLMIMVRPATKHSSPVIRKKYGYPQRATA"
     gene            complement(8840..>10112)
                     /locus_tag="QF480_07055"
     CDS             complement(8840..>10112)
                     /locus_tag="QF480_07055"
                     /EC_number="6.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019539306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="acetate--CoA ligase"
                     /protein_id="HJN06358.1"
                     /translation="EGRDIWWHDAIDGVNTDNVAEVMDSEDTLFILYTSGSTGKPKGI
                     LHTTAGYMVYAEYTFKNVFQYNDGDIYWCTADIGWVTGHSYIVYGPLLTGATTVMFEG
                     VPTWPDAGRFWEIVDKYKINQFYTAPTAIRALVAQGDKWVTKYDLSSLKVLGTVGEPI
                     NEEAWRWYHDLVGKGRCPIVDTWWQTETGGIMITPLAGITPTKPSLATLPLPGVQPIL
                     VDPEGNELKGNSVEGILCIKYPWPGMLRTLYGAHQRCFETYFSTFKGLYLTGDGAKRD
                     EEGYYRIIGRIDDVINVSGHRIGTAEVEDAINQHPKVNESAVVGFPHEIKGSGIYAYV
                     ICDELSEAELETIEAEIRATVTKYIGPIAKPDQIQIVGGLPKTRSGKIMRRILRKIGE
                     GDATNLGDTSTLLDPGVVEDIIVGAKVEVAR"
BASE COUNT         3228 a         2036 c         1573 g         3275 t
ORIGIN      
        1 ctgatgacgg gactagaaat ttttcttcac tatgcttttt tataacattt atcagatcag
       61 caaaattttg ctttccataa aatattttcc ttttcctgta ttgcacatat ttttgtaaat
      121 aatatgctgt tgattcagaa atacagaagt atttaagtga atcgggaatt tcgaatcgca
      181 tttctttagc catcctaaag aaatgatcta cagcatgacg gctggttaaa attatggcgg
      241 tatgctcgtt aaaagtccct ttcgcttttc taaattcctg agctcctatc ccttcaatgg
      301 taatgaattt gtgaaagtca atgttcacat taaatttttt acacaattca ccataaggtg
      361 atttgcccat atcggcaggt tcaggttgcg aaactaatat attttttacc ttcaatattc
      421 catcttttgg ttccctataa aactgattgc atgagaacta gcaatatggt tttatatgtc
      481 ggaagcgtta cctatcaatc tcatcagtac caaaacgggt actatttcga gcgtgcaaag
      541 gtataaaata atatgtaatg ccgaaaaaat tacacttgat tttcctataa taactgtttt
      601 aagtaatctg tagacttgca atatgactat tacagcaata cctatatata taaaaaaatt
      661 gacccctgta tataatacaa ctaatgtaat aggtactaat aatacacctg taataaaatt
      721 ggtatttaaa cctataatta cttgcagcct ttttaatttt tgtgtttgaa agatcgctcc
      781 tgctgcaaaa ataataatga atcgatataa aagcagtcca ataagcaata ggaagatata
      841 acccagtatt tcaaaatcag ttatacctac tatgtctttc tcaaagaacc tttgtaatag
      901 aattaatata aagatacatg ttgagattac aaagtttaac cacaagaatc ccattaccaa
      961 ggttccatgt acttttgtta aactgtttcc tgatcgtgat agattgcttt ctgatcttat
     1021 tgagaaaata gttgaaaagc gatctggcat aaagtaccag atggttgaaa taattcctaa
     1081 caatatcagc agcacgtatg caataacatc ggtatttgaa ttatacaaat gtagtatcgg
     1141 gcttatatca ataccttcgt tctggaaaaa gttaactaca ataggttttg acaaagtact
     1201 gctgtcctct atagggaagt taacatttac tgaatcacta attactaatt cattaacttg
     1261 atattgcaag ctgtcgagca ttataaatca atttcggata aaatacttta gcaaaagtaa
     1321 aaattcgagc ggtaagaaaa tttatttagt taaaaaacca aaaattattt tctgttaatt
     1381 atttcacagt agtataataa atcagtatat ttgaggacta attctaaaca aaataaatat
     1441 gcttaatata atcatttttg ggccaccggg ttgtggtaaa gggacacaat cggttcggat
     1501 tgcaaagagg tacaatctgc ttcatatttc taccggtgat ataattcgta atgaaataaa
     1561 gtcaggttcg aaatttggta ttcaactaaa aacaattgtt gaaaaaggtg aattagttcc
     1621 ttatgaacta ataattaaaa tacttgaatc agcattagta aaaaataaaa atactgaagg
     1681 ttatattttt gatggatacc cacgtacaat taagcaagca attgatctag acaaaatcct
     1741 taaaaaagaa aatgaaacaa tatcgatggt gctgggacta aaagttggag atgataaaat
     1801 acttaacaga ctgcttaaac gcgcaaaagt tgaaggcaga aaagatgata cagaagatgt
     1861 tataaaaaac agacttaaaa tttacagaga cgaaacctgc cccttgatcc actggtatga
     1921 agaaagaggt aagttcatag aactgatggg tgattgttca attgatgaaa tatttgaaca
     1981 aacttgtcaa ttaatcgaca gtaagcttga agttactgtt taaagattac tgaattttaa
     2041 tgttgagttt tgttttctgg ttaatggata aaactaaaac cagtagcgct ttcagcatac
     2101 taagtcaaaa gtatcacgag ctatcatgag ttcctcatca gtaggtacaa ccagcacctt
     2161 gaccggtgaa tcatcttgtg aaataactgc ttctttaccc ctaatttttg ctttttgggc
     2221 atcaataaaa acgcccataa attcaagatc acttaatacc ctgttacgcg ttttcgtatc
     2281 attttctcct ataccgccag taaaaacaat aatatcaaca ccaccaagag ctgcagaata
     2341 agaaccaata tattttttaa ccctgtaggc aaacatctcc aaagcgagtt gtgctctatg
     2401 attaccatct tcggcagcac cttcaatatc tcgcatatcg gatgaaatac ctgaaattcc
     2461 taacaaccca gaaaacttgt ttataagtgt atttgtgtag ttattgctta tgtcttcttt
     2521 atctgcaata tataatagcg ctcccggatc aaggtcacca gtacgtgtac ccattataag
     2581 gccttcggtt ggcgtcatac ccatcgatgt gtcataggat tttccattac taattgctgc
     2641 cattgaagag ccattaccaa gatgacaagt aattattttt tgatctgata tatcaacctt
     2701 tagtatatca cacgccctgg cacttacaaa tttatgactt gtaccgtgaa atccatactt
     2761 tctaatttta tacttttcgt aaagtacgta tggaattgca tacaagtaaa catgctcggg
     2821 tattgtttga tgaaaagcag tatcgaaaac tccaacatgc ttaacctcag gaagcaattg
     2881 ctgcattgca taaatacctt ctaaatttgg aggattatga agaggtgcta attcggtaga
     2941 tttttcaaga gcatgaatta ctttatcgtt aattaacaca ctcccgctaa attcttcagc
     3001 agcgtgaaca accctgtgtc caactgcctg aatctcttct actttattaa gacttccata
     3061 tttttcactt atcaatatcc caagtaaata ttcaatacct tgtttatggt caagaatttc
     3121 tccttcaata attactggat ctttatcgcc ttgtatatgc ttaattccac ttccttttaa
     3181 tccaatttta tcgactaatc cttttgctat cgtttttgat gatggcatat cgaaaagctg
     3241 atactttatt gaggaacttc cgcaatttaa aacaatgatt ttcatttctt cttcttaaaa
     3301 tataactaca agggattact taattactgc attgattatg ttactactaa ccggtttttc
     3361 attttcataa ttatagaaac cacgaccgac gtatcgacca agataattta ctcttaccag
     3421 cctcttaatt accggtgatg ctttgtactt attatcacca tattctgcat acaggttctc
     3481 catatatttc agcactttat caagtcctat tttatcggca agttcaaaag gcccaacatt
     3541 atgcccgaga gtttcacgta ttgtaaggtc aatatcttca accgaagcaa tcccttccat
     3601 taatatttca caagcttcat taataatagg aattatcatt cttgtactta tattgccagg
     3661 agattcacgt acacttactc ctttcttatt aatcatctgg caaaatctta tcacctgttc
     3721 attagcttca cttgtagagt taataccttt cactacttca actatattag ttttatcgat
     3781 gggttcaata aaatgcattc ctattgcccg gcccggattt ttcaatactt cagcaagatc
     3841 cgaaatcatt agtgtgctta tgttggaaga tataatagca tcataatgta caacatcttc
     3901 tattttgcga aagacatctt ttctcgattc tttcattgta ccctctttcc ttgagccaat
     3961 tgcttctatt acaacatcac aattcgctag ctcatttaaa ttagttgtgc catgaatcct
     4021 tgataacaca agccgctttt ctgatggtgt tataccccaa tgatttattt catcattaag
     4081 ctgatcttct agcattaaaa atatatcgtt aatacggtct tcggatacat caacaaaaat
     4141 aacttccatt ccataacgtg ctacgagtaa agtaatgctt tgcccaacag aaccacaccc
     4201 cacaatccct actgaatgaa tttttccttt gggctttaac ttatcaccta atctaaaatc
     4261 cgttaactgg tccattttta attgattgat agtaatttgt gattgattaa attttgaaga
     4321 attaagacta cttgtataat aaggtttgag cccagaatca atatcccaga taatctcata
     4381 ttatcctaaa ttcgactctt aaatcctgat tcccggagct ttaattcaac tttgcaaaga
     4441 tagtcttctt aaaggcacaa atgaaataac ttgtttaact cttaaattat atgtggctct
     4501 atattttaaa caaaaatata tgtgattgta tctaaataac acgacaatct aattacaact
     4561 ctattctctt taattataca atcatttcaa atccttaaaa actgtaacag ttgtgtcatc
     4621 attgaaatgc actttaaaat ttaatttttt aaagaccgat atcattgctt tattatcttt
     4681 tgtggtttca gcagaaacac gttttatacc agcaatacca gctatttcaa cacaatattg
     4741 tgttaatata taccctagtt cattatgttg ccagtcatca gcaactagga ctgcatattc
     4801 agcattcaca acatcagggt cggcaatcag tcttccaact ccaatcaatc ttttccggtc
     4861 ttcataatct atttcagcaa ctattcccat ttcacgatca taatcaatat agcaaaactg
     4921 tgtagcaact tcatgagaat taaaatggaa atcatatcta aacctgtggt aaattgattc
     4981 cttcgaacag ctccctaaca tttccaacca tagggattca tcttcaggtt ttataggtct
     5041 aagcaagaca tctgttcgat cttttaattt cgacattttt ctaaggcgtt caggatatgg
     5101 tcttaggatg agatgtgaat aatcggcatt tgctttactg ggtgaatcat tatctacaac
     5161 aatcctggca tctagtgcaa taacatcttc ggaagtaact attaggggat ttatatccaa
     5221 ttcttcaatt tccgggtaat cagcagcgag atatgatatc cttattagga cctcgattaa
     5281 tttgtcaata ttttttggct tactacccct atatccttca agtaaaggat aaatttgaag
     5341 cgactttaac atttgacgag caagctgttc atttaatggt ggaaattcaa ggcgtttatc
     5401 gttaaataac tctgcactgg taccacccat gcccacaagc attattgtac caaacaaact
     5461 atcttttttg atgccaataa tcatttcaat atcatctttc ctgttaatca ttttttgaac
     5521 cgtgatacca ataatatttg catctggtac ttttgcgcca atagtttcaa gcatattttt
     5581 gtaagtagct ctaacgatct cctccgtttc aagatttaat gctacgccac caacctccga
     5641 cttataagtt atgtcagggg agctgatctt caaaacaaca ggataacctt ttctgttggc
     5701 aatgtcaaca gcatcatctt ctgttaatgc caattcagga tgagttgttg agattccata
     5761 atcattgatc aacagctttg aatcatcttc tgacagaacc tttgatttcc taaatattct
     5821 gccaatatat ttttctctca ggctttctct gtcgtagttg aatgctactg gaacgtcctt
     5881 tggagtttcg tacaaaagtt ccaggttttt catgtactgt gtcatagtca taaacgatct
     5941 catagcctgc tcaggagtat tataaacagg tatttctgca cttgttaaga tatccagacc
     6001 cttatgcatg cttgtaccac caagccaagc agccattata aattttgatg tttgagctga
     6061 aatttcaacg attgcctccg ctattgcagt tggatttgtc atcgcctgtg gagtaaggat
     6121 tataagtaca gcatctatat atttatcatt aaggacaata cttatggctt gcgatactcg
     6181 tttaggagta gcatctccta atacatctat cgggtttccg tgtgaccaat atggcggtaa
     6241 gagctggtta agtttgctca ttgtttcttc tgaaagaggt tcgagtctac ctcctaaaga
     6301 gattattgta tctgttgcca taacccccgg accaccagca ttagtaacaa ttgcaaggcc
     6361 tgtagctttg ggtattcgtt ttctgccgac aagatccgta atgtcaaaaa tattaccaat
     6421 atcataaact ctagccaatc cggctcttct gaaaactgca tcatatatag catcctctga
     6481 tgcaagtgca cctgtatgag atgcggcgac agcggctgat tcagggaagc ggccagattt
     6541 ataaacaatt attggttttt ttcgtgcaaa tgctctagct gccgacataa atgatcttgc
     6601 gtttgccaat gattcaacat atagaattat cgatttcgta tttgtatctt gaccaagata
     6661 atctattaaa tcgccaaaag taacgtcgac ggcgtttccg atcgaaatga aataagagaa
     6721 tcctattttt gtatcatcgg cccaatcaag cacggaggca catagtgctc ctgattgaga
     6781 aatgaaagca acctttcctt gtcgaggcat tccgtttgca aagctcaaat taagttttgc
     6841 tttgggaact attactccaa gacaattagg accgataaca cgcatatcag ggaatttgtc
     6901 aatttgcttt ttaagcttta cctcaaggag tttgcccttt tccccagact ctttaaaccc
     6961 agctgacatt actattactc cgttaattcc agctttacca caattgacaa ttatttctgg
     7021 cacttgctta gcagctgtca taataacagc caaatcaggt tttttaggaa ggctttctat
     7081 atttggataa catggaattc ccattacagc ttctctattt gggttaatgg gataaaccac
     7141 accttgaaaa cctccaccca ccagattttt aagtgttaaa ctacccacgc tgtttggatc
     7201 attcgatagt ccgataatag ctatcctctt aggacggaaa atgctgtcaa gttttttaat
     7261 tggcattgac ttataatgtt aatctgatta tgaatcaatt agatcattga tggattttgt
     7321 tattaatttc tcaaagataa gataaaaaaa tctccgaaag ttgaactaac tctcggagat
     7381 caataactaa aattcgtaaa ctaaagctac tgcaggttaa gcagtagccc gttgtggata
     7441 tccgtatttt ttccttatta caggtgaaga atgcttcgtt gcaggtctaa ccataatcat
     7501 taatacagtt cctgccaaca ctgcaaaacc agaaatagta aacgctaatg agaaattgcc
     7561 tatatctccc atcattccac ccaggatggg tccaagtata ccaccaacac catatgctag
     7621 gaatacaaat ggataatttt gacctacatt ttttgctcca aaagtatcag cagttattgt
     7681 tgggaataag gcaaaattac ctccaaaatt gaatccaata agagttgcgc caagatataa
     7741 gaggacctca tttcccgcca tatatgtaaa cataattacc aataaccctt gtgtagcagt
     7801 cataataatt attgaggtct ttcgtccaag tttatcactt aatgttcccc atacgattct
     7861 accaatcccg tttgcaaggc tgaagaaaac tgccattgca gttccagcaa ttgcacttgc
     7921 ttctgcaatt gaataaccgt tagcctgtaa agcctccatc ggataaagtt tcattaaacc
     7981 aatagacatt aatccagcac cggcactcac aacaaatgca aagaatatta aataaaactg
     8041 tactttactt aacatctcat tactagcaaa ttccttatca tcatttgatt ctaagtcggc
     8101 tgccgtttct tctttgtacc catcaggttt ccagcctaca ggaggaaatt tcatccacat
     8161 accacctata attaccataa cagcaaaagc aattccgtaa attataaatg tggatgacag
     8221 accaaaatta ttaataagat gtccccacga gccggccagc tttacccaaa acattgcccc
     8281 aaaaccaaaa cctgcaactg caagtccggt gatcatcccc ttcttatcgg gaaaccatct
     8341 catgcccaca gcaatcggta ctacatatgc caaaccgata ccggcacctc ctactaaccc
     8401 taatagaatt agaagtgcaa taaaattagt gccaccaaat aatccagcta acaaataacc
     8461 tagtcctaat atgattccac ctataattgt aagtttttga ggaccataag tattaagcct
     8521 tttaccagct attaccataa aaactgcgaa tgaagctaaa ccaattgcaa atacccattg
     8581 agtatcagct ttcgcccatc cttctgcagt cagtgaaggt gtaaatacag accatgcgta
     8641 tatagcacct aaggcgagtt gaataaggat agcacctaaa acaacaagac cacgattcat
     8701 tactctttga tttttcatta taatttgatt tgtgaattaa ttaacactag tttggcttat
     8761 ctgagtttga aaccggaata ccatcaaaaa atgacattcc attgtcaaac gtggataaga
     8821 attaatttta aaaaagggat tatcgcgcaa cttcaacttt agcgccaaca ataatgtctt
     8881 caacgacacc aggatcaaga agtgtagatg tatcacccaa attagttgca tctccttcac
     8941 ctatcttacg aagtattcgg cgcattattt tgcctgaccg agttttgggt aaaccaccaa
     9001 caatctgtat ttgatcaggt tttgctattg gtccaatata tttggtaaca gtggctctga
     9061 tttcagcttc aattgtttcc aattcagcct ccgaaagttc atcacaaata acataggcat
     9121 aaatacctga acctttgatt tcatgtggga aacctactac agcagactca ttaacctttg
     9181 ggtgttgatt aattgcatcc tcaacttctg cagttccaat gcggtgacct gatacattaa
     9241 ttacgtcatc aatacgtccg ataattctat aataaccttc ttcatctcgt tttgctccat
     9301 caccggttag atataaacct ttaaatgttg agaagtatgt ttcaaagcaa cgttgatgag
     9361 caccataaag tgtacggagc ataccaggcc atggatattt aatacacagg ataccttcaa
     9421 cactatttcc ttttaactca tttccttctg gatcaacaag aattggttgt actccaggta
     9481 acggtaaagt agctaatgat ggttttgttg gagttatacc ggccagtggc gttatcataa
     9541 tgccacctgt ttcggtttgc caccaggtat caacaatcgg gcaacgtcct ttaccaacaa
     9601 ggtcatgata ccagcgccat gcttcttcat taattggttc accaacggtt ccaagtactt
     9661 taagcgaact aaggtcgtat ttagttaccc acttatcacc ttgagcaact aatgctctaa
     9721 tagcagtagg tgctgtataa aattggttaa ttttatattt atcaactatt tcccaaaatc
     9781 taccagcatc aggccatgtt ggtactcctt caaacataac ggtggttgct ccggttaaca
     9841 gtggtccgta aacaatgtat gaatgaccag ttacccaacc aatatcagct gtacaccaat
     9901 aaatatcacc atcattatat tgaaaaacat ttttaaatgt atattcagca taaaccatat
     9961 agcccgctgt tgtatgaagt ataccctttg gttttccagt tgaaccagaa gtgtaaagaa
    10021 taaataatgt atcctcagaa tccataactt cagcaacatt atcagtatta acaccatcta
    10081 tggcatcatg ccaccaaata tccctaccct ca
//
LOCUS       DASCQP010000410         2716 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001519937, whole genome shotgun sequence.
ACCESSION   DASCQP010000410 DASCQP010000000
VERSION     DASCQP010000410.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2716)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2716)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2716
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001519937"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..366)
                     /locus_tag="QF480_07060"
     CDS             complement(<1..366)
                     /locus_tag="QF480_07060"
                     /inference="COORDINATES: protein motif:HMM:NF012544.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06359.1"
                     /translation="MKAKKFGSFSGVFTPSILTILGVIMYLRLGWVTGVAGLWGVIAI
                     IILAHVISVTTGLSISSIATDKKIKAGGIYYLLSRSLGLPMGGSIGITLFIGTALSIA
                     LYIVGFTDTFLSLSYVSNLF"
     gene            complement(526..1662)
                     /locus_tag="QF480_07065"
     CDS             complement(526..1662)
                     /locus_tag="QF480_07065"
                     /inference="COORDINATES: protein motif:HMM:NF027964.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="saccharopine dehydrogenase C-terminal
                     domain-containing protein"
                     /protein_id="HJN06360.1"
                     /translation="MKKIIVLGTGLVGKPIAIDLANTTNSEVAVADLSQEKLNNVGDK
                     RIQKIQADLRNDSELISLISPFDLVVVAVPGFMGFTCLKNCINAGKDIVDIAFYPEDV
                     FELSDLAKQKNVRVISDMGVAPGMSNLLVGYIASKLDSVLTADIYVGGLPKIRTKPWE
                     YKAVFSPSDIIEEYTRPARIVRNREIVTVPPLTEIEHLEFDRVGTLEAFNSDGLRSLL
                     FTIKADNMREKTLRYPGYADKIKLLSDNGFFNAEKIKVAGELVSPLDLTSKLLFDQWK
                     LGENEEDITVMRITVEGMKSGKKLRYNYELYDEFDKETKVHSMARTTGYTASTAIRLL
                     AEDKYLTKGISVGEMMVSDESVVNFMLRGLKERGINYKSNIEYI"
     gene            1913..>2716
                     /locus_tag="QF480_07070"
     CDS             1913..>2716
                     /locus_tag="QF480_07070"
                     /inference="COORDINATES: protein motif:HMM:NF013226.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiA family prenyltransferase"
                     /protein_id="HJN06361.1"
                     /translation="MSLILFFIIAQGLGINVFSDGLSLGEFILLIVSTILIAIGGYII
                     NDIADVNTDSINKPEKHTTESAFSIEFANTVYWITTTIGVLLGVFLSYLVSQINFGLI
                     FLLSAGLLWFYSQKYQCQPLVGNIVIAFLSALSFGLVWLFEFYALSNNPEVFVAVQSN
                     FSLINRFVIIYMGFAFIVSLFREVIKDMEDYKGDNRFGCSTFTVKYGISASKILALVV
                     AYIALLATLYVQYGFLNSGLNLLFGAFFIIDILFIVIISLLHKASSKLNY"
BASE COUNT          842 a          513 c          423 g          938 t
ORIGIN      
        1 gaataaattc gaaacgtatg acagcgacaa aaaagtatcg gtaaacccga ctatataaag
       61 tgctatacta agagcagtgc caatgaacaa tgtaattcca atagaaccac ccatcggtaa
      121 acccaaggat ctggaaagaa gatagtaaat accgccagcc ttaatctttt tatcagtagc
      181 aatggatgaa atactcaagc cagttgtaac tgatattacg tgagccaaga taataattgc
      241 aataacaccc cataatccgg caacacctgt aacccaccca agacgcaaat acataattac
      301 acccaatatt gttaatattg aaggtgtaaa tactcctgaa aaggaaccaa atttttttgc
      361 tttcacagac atttgttatt ggatattgat catcagtcat aggttattgg tcattaatca
      421 ttggttaaat ggctgataaa tatttactaa ttacttttaa ccgataacgt ttaactatta
      481 accaataact ttaaccattc acgattaact aataacgttt aacttttaaa tatattcgat
      541 attcgatttg tagtttattc ctctttcctt aagtccacga agcataaagt taaccacaga
      601 ttcatcactt accatcattt ccccaacgct gattcctttt gtaagatact tatcttcagc
      661 taacaacctt atagctgttg aggcagtata ccctgttgtt cgtgccattg aatgcacttt
      721 ggtttcttta tcaaattcat cgtaaagctc ataattatat cgaagctttt tccctgattt
      781 cattccttca accgttattc tcattacagt tatatcttct tcattttcac caagtttcca
      841 ttgatcgaaa agaagtttcg aagttaagtc aagaggcgaa acaagctcac ccgcaacttt
      901 aatcttttcc gcgttaaaaa atccattatc gctgagaagc tttattttgt cagcatatcc
      961 tgggtatctg agtgttttct cacgcatatt atcagcctta attgtaaata acagcgaccg
     1021 taatccatca ctgttaaagg cttccaatgt accaacccta tcaaactcca gatgttcgat
     1081 ctcggttagt ggtggcactg taactatttc tctgtttcta acaattcgag ccggtcgagt
     1141 atattcttca attatatcag aaggtgaaaa aactgccttg tattcccaag gctttgtgcg
     1201 tatttttggt aacccaccaa cataaatatc cgctgttagc acgctatcaa gtttagaagc
     1261 tatatatccc accagcagat tgctcatacc tggagctaca cccatatcac tgatgactct
     1321 gacatttttt tgtttagcca aatcagatag ctcaaaaaca tcctcaggat agaaagcaat
     1381 atcaactata tcttttcctg cattaataca attcttaagg catgtaaatc ccataaaacc
     1441 aggcactgcg acaacaacta ggtcgaatgg cgaaattaga gagataagtt cagaatcatt
     1501 tcgtaaatca gcctgaatct tttgtatccg tttgtcaccg acattattaa gcttttcctg
     1561 acttaaatca gctacagcaa cctcagagtt tgttgtattt gccagatcta tagcaattgg
     1621 tttcccaact aatccggtgc caagaacaat tatttttttc aatttacgtc tttttagttt
     1681 tgtcaaatat atagtaaatc ttaacaggtt atatagcaat atatgtttag aagtaacaat
     1741 gacaattgtt cacttcgttc ttgatcagtt taaatgtatt ttgtttgtaa tctatggtct
     1801 gttttctttt tcacttcaaa taacctacta gctttgtaac taaataaaat agaacatgat
     1861 tgcctttttt aaattaatcc gctggccaaa cctgttgata ataattctca gcatgagctt
     1921 aattttattt ttcataatag ctcagggatt gggtattaat gttttctcag atggattgag
     1981 tttaggagag tttatccttc ttatagtttc taccatactc attgcaattg gaggttatat
     2041 tataaatgat attgccgacg ttaacactga ttctataaac aaaccagaaa aacacacaac
     2101 tgaaagtgca ttttcgattg agtttgcaaa cactgtatat tggattacta ccactattgg
     2161 tgttttgtta ggtgtatttt tatcatatct ggtaagtcaa ataaattttg gattaatatt
     2221 tcttttaagt gccggactac tatggtttta ttcacagaaa taccagtgcc aacctcttgt
     2281 tggaaatata gtaattgctt tcctgagcgc attatctttc ggtcttgtat ggctatttga
     2341 attttatgca ttgagcaata atcctgaagt atttgttgca gtccagtcta acttcagctt
     2401 aataaaccgg tttgtaatta tatatatggg atttgctttt atagtgagcc tcttccgtga
     2461 agtgattaaa gatatggagg actataaagg tgataacagg tttggatgta gtacgtttac
     2521 cgtgaaatat ggtatcagtg cttccaaaat tttagcactg gttgttgcat atattgcact
     2581 tttagctacc ctatacgttc aatatggttt tttaaattca ggccttaatt tgttatttgg
     2641 agcatttttc ataatcgaca tattgtttat agtaataatc agcctcttac acaaggcatc
     2701 atcaaaactt aactat
//
LOCUS       DASCQP010000411         2259 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001523527, whole genome shotgun sequence.
ACCESSION   DASCQP010000411 DASCQP010000000
VERSION     DASCQP010000411.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2259)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2259)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2259
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001523527"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..187)
                     /locus_tag="QF480_07075"
     CDS             complement(<1..187)
                     /locus_tag="QF480_07075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06362.1"
                     /translation="MKKYFILTLLILIIGFVIINSGIIKPNDKIQKAENNRVTLAPGE
                     YMAHQRMYPYNEIKQENY"
     gene            552..1010
                     /gene="mraZ"
                     /locus_tag="QF480_07080"
     CDS             552..1010
                     /gene="mraZ"
                     /locus_tag="QF480_07080"
                     /inference="COORDINATES: protein motif:HMM:TIGR00242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0051302 - regulation of cell division
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HJN06363.1"
                     /translation="MTNILGTYECKVDVKGRFMFPAPYKVQLGEDLKLGMVIKRSIFK
                     KCLELFPYETWQEESKMVSRLNMFKKKNAEFATKFMAGVKPIELDGIGRILIPKDLIT
                     YSGISKAIVLTSVVNRIEIWDKAAYEKAVDYDPDDFAKLAEEVMGEFETE"
     gene            1017..1910
                     /gene="rsmH"
                     /locus_tag="QF480_07085"
     CDS             1017..1910
                     /gene="rsmH"
                     /locus_tag="QF480_07085"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018336895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016434 - rRNA (cytosine)
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HJN06364.1"
                     /translation="MYHNPVLLEKSIEGLNIIPNGIYVDATFGGGGHSRAILQKLKEG
                     RLVAFDQDSDSLMNTIADDRFVLVNHNFQFLKNFLRLHNISKVNGILADLGVSSHQFD
                     VPERGFSTRFDAPLDMRMNLNQQVKAADIVNTYSEEELLSLFKNYGEIKNSKCFSRAI
                     IEARKSHPINTTGELIESIQNCLPKFKKNKFLAQVFQALRIEVNDEMQVLKQLLQQAS
                     KSLMQGGRLVVISYHSLEDRLVKNFIRSGNFNGIVKKDFYGNPIVSFKSITRKPIVPD
                     EIEIENNNRARSAKLRIAEKI"
     gene            1913..>2259
                     /locus_tag="QF480_07090"
     CDS             1913..>2259
                     /locus_tag="QF480_07090"
                     /inference="COORDINATES: protein motif:HMM:NF039650.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsL-like putative cell division protein"
                     /protein_id="HJN06365.1"
                     /translation="MTPKSNKILDPTIKSENKAIKADGLISKIVKDVLGGDLISTGTF
                     KFFRYLLYLALLAFIYIANNYYAENNIRQINRLRKELKELRYEYINVKTMLMEIEKQS
                     QIAKKLEKKGIKK"
BASE COUNT          814 a          352 c          401 g          692 t
ORIGIN      
        1 aataattctc ctgctttatt tcattataag gatacatcct ttgatgtgcc atgtactcac
       61 ctggggccaa tgttactcta ttattttcag ctttttgtat tttatcattt ggcttaatga
      121 tcccagaatt aataattaca aaaccaataa ttagaataag tagtgtgaga ataaaatatt
      181 ttttcatctg ttttagattt tttgttagag gtcttaggaa cctacattca ataaatgaca
      241 atattactct taaatcagtt gcggattaag aataaataaa aatttaatct attaataaat
      301 ctctgaaact catccaaatt aatccccaat taggcttatt aacaatatta cattttaatc
      361 atttgttaat aagtcatatt tgattttcta cttagcactt atcttgctga tttaccgcta
      421 ataagtaaac ttgacaacaa aaataaattg ttaaaaacgt aaccttttat taacaatgtg
      481 gtaaaaggtg ttaaataatg ttaaattgtg gtaaatagtt tttacattta caccataatt
      541 cttagttttt aatgaccaac atattaggca catacgaatg taaagtggat gtaaaaggaa
      601 ggtttatgtt tcctgctcca tacaaagttc agcttggtga agacctgaag ttaggcatgg
      661 tcattaagcg gagcatattt aaaaagtgcc tcgaactctt tccttacgaa acctggcagg
      721 aggagtcgaa gatggtaagt cgattgaata tgttcaaaaa aaagaacgca gaatttgcaa
      781 ctaagtttat ggctggtgtg aaacctattg aactagatgg aattggaaga atactaattc
      841 caaaggattt gattacatac agtggaataa gtaaagccat tgtactcact tcagttgtaa
      901 accgtataga gatctgggat aaagcagcct atgaaaaggc tgttgactat gatcctgatg
      961 acttcgccaa gttggcagaa gaagttatgg gcgagtttga aactgaataa aaaactatgt
     1021 atcacaaccc tgtactgcta gaaaaaagta tagaaggact taacattatt ccaaatggca
     1081 tctatgttga tgctacattt ggtggtggcg ggcattcgag ggcaattctg cagaaactta
     1141 aagaaggtag gctagtcgct tttgatcagg attcagattc attgatgaac acaattgctg
     1201 atgatcgctt tgttcttgtc aatcacaatt tccaatttct aaaaaacttc ctcagacttc
     1261 ataatatatc aaaagttaat ggtattctgg ccgatcttgg agtatcctct catcaatttg
     1321 acgttcctga gcgagggttt tcaacacgtt ttgacgctcc acttgacatg cgaatgaacc
     1381 ttaatcagca agttaaagct gctgatatag tgaacacata ttctgaagaa gaattgcttt
     1441 cgctatttaa gaattatggg gagattaaga acagtaaatg tttttcacga gcaattatag
     1501 aagcccgtaa atctcatcca atcaatacta ctggtgagtt aattgagagc attcagaatt
     1561 gtcttccgaa atttaaaaaa aacaaattct tagcacaagt ttttcaggcc ttacgaattg
     1621 aggtaaacga tgaaatgcag gttcttaagc agttgcttca acaggcaagc aaatctctaa
     1681 tgcaaggagg aagattagtt gtgatttcat accactcatt agaagacagg ctagttaaaa
     1741 acttcattag atcaggaaat tttaacggaa ttgtaaaaaa agatttttat ggaaacccta
     1801 tagtaagctt taaatccatt acgcgaaaac ctatagttcc ggatgagata gaaattgaaa
     1861 ataataacag agccaggagt gccaagctta gaattgcaga gaaaatataa caatgacacc
     1921 taaatcaaat aaaatattgg atccaacgat taagtccgaa aataaagcta tcaaagccga
     1981 tggacttata agcaaaatcg taaaagatgt tcttggtggt gatttgattt caaccggaac
     2041 atttaagttc ttcaggtatc tgttgtattt agcattactt gcatttatct acatcgcaaa
     2101 taattattac gccgaaaata acataaggca aattaataga ctcaggaaag agctcaaaga
     2161 gttgcgctat gaatacataa atgtaaaaac aatgttaatg gagatcgaaa agcaatcaca
     2221 aattgctaaa aaactcgaaa aaaaaggcat taaaaaaaa
//
LOCUS       DASCQP010000412         4467 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001529261, whole genome shotgun sequence.
ACCESSION   DASCQP010000412 DASCQP010000000
VERSION     DASCQP010000412.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4467)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4467)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4467
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001529261"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>4467
                     /locus_tag="QF480_07095"
     CDS             <1..>4467
                     /locus_tag="QF480_07095"
                     /inference="COORDINATES: protein motif:HMM:NF014567.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component regulator propeller
                     domain-containing protein"
                     /protein_id="HJN06366.1"
                     /translation="DSIYPPPSIIAAKPEQIKALPLRYKDEALFDIRYLDSDQYLPNS
                     FIRAIIKDNRGIIWFGTHTGGLVSYDGQFFDHYNMNTGLPSNKVLSLLKDKKNNLWIG
                     TGGGGVVCFDGKKIIQYTTKQGLPSDIIQAIIEDKNGTIWFATKEGVSSFDGKIISTY
                     TTDQGLAMNDIFTLFEDELGNMWFGTITKGVTKFDGKSFTTFNKMDGLASDNLLSITQ
                     DQHGNIWFGTHGGGVSKFDGETFTNYTSEQGLGSNVIMSIIEDYDGYLWFGTHGNGIT
                     RFNGKSFSNFTTKEGLSDNYARTLFDDGQGNLWVGTDGGGVSIFNLHSFNNYTQEQGL
                     SNNLVLSIFQDSNNKLWFGTYDGGVLIYKEFEDPHQKSKFNCINTDQGLPNNIVMSIV
                     EDTNNNFWFGTFGGGVSKLDGESLKLGQLRFTNYSTAQGLNNDYVSSVLLDNKGNIWF
                     GTDGGATKFDGNEFITITKKDGLGSNIVTCIFQDEKQNFWFGTIDGGVSHYKDDTLFQ
                     YTTEQGLGNNTVWTITQDKNGIMWFGTDGGGITLFNGDSFRTITTKDGLSNDYAHSLV
                     VDDDSSVWVGTTNGLNQIKLKDGFLFKNKSFAKLNPVINNFDKKDGLIGIDFYTNAVL
                     HDNKNRLWWGTGKALTSLDLKNYISPREAPIVHTHGITINNKTINFNELKSNNENNSQ
                     TGIRFTDVSLFSNNPIGLSLPFELNHITFHFSAIDWAATNQIQYQYKLEGFDQDWGLI
                     KNDNLADYRNIPPGQYTFQLRAIGKTGNWSEVLEYPFIIRSPWWQTWWAIVLYIVAFG
                     LIFWLFIKWRVNIVKKQKIVLENMIFDRTKELDSALKEAEQATIAKSQFIATISHEIR
                     TPLNAIMGLTHLTKNTELNPKQEDYLLKIDRSAVTLMSLLNNVLDFSKIEAGKMQIEK
                     VNFDLDIVLNSIIILNLQNAREKNLELVITIDPLVPRMLIGDPLRIGQVITNLCSNAI
                     KFTSSGEIVINVSIGEKRGKKETYLQISVKDTGIGIDKEQIPFLFDEFKQADSSVTRK
                     YGGTGLGLTISKLLLEMMGGRIWLETEIGKGTTFFFDFKVGVQIQKPSQTKILPDELK
                     KLNLLICIDQPSTLNSLVTTLRSFSLKVDSVSSGEEVLEQLKQKSYDLLIIDQQLKGI
                     NGVETITLMQESEDIQAIKTVLITDSDENQKIFKNISGIDSFLSKPFLPSIVLEKILF
                     VFGIEKVSSSGQNEKEEGLNKIEKAISGRHILLAEDNEINRQVVFELVNNVGVQVDLA
                     DNGAIALQKALQTNYDLILMDLHMPVMDGYDSAIQIRSNNIITPILAITADALDTVEA
                     KCKDAGINDIITKPINPDLLYAKLLKWMGRDIKTTKTTFKPQEEKDIQLLNKSIPNLD
                     MQSGVRRFGDNERLYRKMLKKFISNNTQTCSELKKLISEEKFEQAHLMIHTLKGESGN
                     IGANKVAKLALKVEKAVLTKDVPSFEKKLILLEKSMKDIITAVQNYFHEKNSE"
BASE COUNT         1590 a          678 c          865 g         1334 t
ORIGIN      
        1 gattcaatat atccaccacc aagtattatt gccgctaagc ctgagcaaat aaaggctttg
       61 ccattaaggt ataaagacga agctctgttt gatatccgtt atcttgattc tgatcagtat
      121 ttacctaatt catttatcag agcaattatc aaagataacc gtggtataat ttggtttggc
      181 acccatactg gaggacttgt ttcttacgac gggcagtttt ttgaccatta caatatgaac
      241 actggattgc caagcaataa ggtcctttct cttcttaaag ataaaaagaa taatttgtgg
      301 attggtacag gaggtggtgg agtagtttgc tttgacggaa aaaaaattat ccagtacacc
      361 accaaacagg gtctgccatc agatataata caagcaataa ttgaggacaa gaatggtacc
      421 atctggtttg ctacaaaaga aggtgtttca tctttcgatg gaaaaataat ttccacctac
      481 acaactgatc agggattagc aatgaatgat attttcactt tatttgaaga cgaacttggg
      541 aatatgtggt ttggaacgat aactaaagga gtaacaaagt ttgacgggaa aagttttacc
      601 acttttaaca aaatggatgg attagcatcg gacaatcttt tgtcgattac acaagatcaa
      661 catggaaata tatggttcgg tactcatgga ggaggtgtct ccaaattcga tggcgagact
      721 tttactaatt atacttcaga gcagggttta gggagtaatg taatcatgtc aatcattgaa
      781 gactatgatg gttatttatg gtttggaact cacggcaacg gtattacacg ttttaatggg
      841 aaatcctttt caaattttac tacaaaagag ggattaagtg acaattatgc acgaacattg
      901 tttgatgatg gtcaagggaa tctttgggtt ggcacggacg gtggaggtgt ctctattttt
      961 aatttgcata gttttaacaa ttatacacaa gaacagggac taagtaataa ccttgtttta
     1021 tcaatctttc aggatagtaa taataaattg tggtttggaa cttatgatgg tggtgtttta
     1081 atttataagg aatttgagga tccacatcag aaaagtaaat ttaattgtat taatacagat
     1141 caaggccttc caaacaatat tgtaatgtct attgttgagg atactaataa taacttttgg
     1201 tttggaacat ttggcggagg tgtgagtaaa ttggatggcg aaagtcttaa gttggggcag
     1261 ctaagattta caaattattc aacggcccag ggtttgaata atgattatgt aagctcagtt
     1321 ttactggata ataaaggcaa catttggttt ggaaccgatg gaggtgctac gaaatttgat
     1381 ggcaacgaat ttattacgat aacaaaaaaa gatggcctcg gtagcaacat agttacatgc
     1441 atatttcagg atgagaaaca aaatttctgg tttggaacca tcgatggtgg agtgtctcat
     1501 tataaagatg atacattatt tcaatataca acggaacaag gacttggaaa taatacggtt
     1561 tggacaataa ctcaagataa aaatggaata atgtggtttg gaaccgatgg aggtgggata
     1621 actttattta atggagattc tttcaggaca attacgacaa aagatggctt gagtaatgat
     1681 tatgcacatt cactagtagt ggatgatgat tcttccgtat gggtaggaac tactaatggt
     1741 ttaaaccaga ttaaattgaa agatggtttt ttgtttaaaa ataaatcttt tgcaaaattg
     1801 aatcccgtaa ttaataattt cgataaaaag gatggactta taggaataga tttttacaca
     1861 aatgctgtac tgcatgataa caagaaccga ctatggtggg gaactggcaa agcacttaca
     1921 tcacttgatt taaaaaatta tatatcaccc agagaagctc caatagttca tactcatggc
     1981 ataacgatta ataataaaac aataaatttc aatgagctaa aatcaaataa cgaaaataat
     2041 tctcaaacgg gtattcgctt tactgatgtg tcgttatttt caaataaccc tattggttta
     2101 agcttaccgt tcgaacttaa tcacatcact tttcactttt ctgcaattga ttgggctgcc
     2161 acaaatcaaa ttcaatatca atataaactg gaaggctttg accaggattg gggattaatc
     2221 aaaaatgata accttgctga ctatagaaat attcctccag gtcagtatac ttttcaacta
     2281 cgggcaattg gtaaaactgg taattggagt gaggtactag agtatccctt tataataaga
     2341 tcaccttggt ggcaaacttg gtgggccatt gtattatata tagtcgcatt tgggttaata
     2401 ttttggttgt tcatcaaatg gcgcgttaat attgttaaaa aacaaaaaat cgtgttagag
     2461 aacatgatat ttgacaggac aaaagaacta gatagtgccc ttaaagaagc cgaacaagcg
     2521 actattgcta agagtcagtt tatagcaaca atatcacatg aaatacgtac acctttgaat
     2581 gctataatgg ggctaactca cttaacaaaa aacactgaat taaatcccaa acaggaagat
     2641 tatcttctaa aaattgacag gtctgctgta actctaatga gcctacttaa taatgtgctc
     2701 gatttctcaa aaattgaagc aggtaaaatg caaatcgaaa aagtaaattt tgatttggat
     2761 attgttttaa actcaatcat aatactcaac ttacagaatg cacgcgagaa aaacctggag
     2821 cttgtgataa ccattgaccc acttgttcca agaatgctaa taggtgatcc tttaagaatt
     2881 gggcaggtaa ttacaaacct atgtagtaat gctattaaat ttacatcatc aggagagata
     2941 gttattaacg ttagtatagg ggaaaaaaga ggcaaaaaag aaacctattt acagatttca
     3001 gtaaaagata ctggaattgg aattgacaaa gagcaaattc catttctatt tgatgaattt
     3061 aaacaagctg atagctctgt aaccagaaaa tatggtggca caggattagg tcttactatt
     3121 agtaaattac ttttagagat gatgggtgga agaatttggt tggaaacaga aattggtaaa
     3181 ggcactacat ttttcttcga ttttaaagtt ggggttcaga ttcagaaacc ctctcagact
     3241 aagatactcc ccgatgagtt aaaaaaactt aatctactta tatgcattga ccaaccatca
     3301 acacttaatt cactggtaac tacactgcga tctttttcat taaaggtgga ttcagtatct
     3361 tctggtgaag aagtactaga acaacttaaa cagaaatctt acgacttgtt aatcattgat
     3421 caacaattaa aaggtattaa cggtgttgaa acaataacct taatgcaaga aagtgaagat
     3481 attcaagcaa ttaaaacagt tctgatcacg gatagtgatg aaaaccaaaa aatcttcaaa
     3541 aatatttccg gaattgatag cttcctgagt aaaccatttt taccttcaat agtgctagaa
     3601 aaaattctat ttgtgtttgg catagaaaaa gtctcttctt caggacaaaa tgaaaaagaa
     3661 gagggtctca ataaaataga gaaagccatt tcgggacgtc atattctact tgcagaagat
     3721 aatgaaataa accgacaggt agtatttgaa cttgttaata atgtaggagt tcaagttgat
     3781 ttggcagata atggcgccat agctttacag aaagcgttac aaactaatta cgaccttatt
     3841 ttgatggatt tacacatgcc tgtaatggat ggatacgatt ccgctattca aatacgcagc
     3901 aataatatta taacacctat tttggctata acagctgatg ctttggacac tgttgaagca
     3961 aaatgtaaag atgcgggtat caacgatatc atcacaaaac ctataaaccc agatttactt
     4021 tatgccaaac tgttaaaatg gatgggtaga gacattaaaa ctactaagac tactttcaaa
     4081 cctcaggaag aaaaagatat tcaattgctt aacaagtcta tcccaaattt ggacatgcaa
     4141 tcaggagttc gcaggtttgg tgataatgag agactttaca ggaaaatgct taagaagttt
     4201 atttccaaca acacacaaac ctgttccgaa ctaaaaaaac ttattagcga agaaaaattt
     4261 gagcaggctc atttaatgat tcatacgttg aaaggtgaaa gtggtaatat tggagctaac
     4321 aaagttgcta aactagcact gaaggttgaa aaagctgtgc taactaaaga tgtccccagc
     4381 tttgaaaaaa aactgatatt actagagaag agcatgaaag atatcattac agctgtgcaa
     4441 aattattttc acgaaaagaa ctctgag
//
LOCUS       DASCQP010000413         5969 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001530914, whole genome shotgun sequence.
ACCESSION   DASCQP010000413 DASCQP010000000
VERSION     DASCQP010000413.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 5969)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5969)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5969
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001530914"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1464)
                     /locus_tag="QF480_07100"
     CDS             complement(<1..1464)
                     /locus_tag="QF480_07100"
                     /inference="COORDINATES: protein motif:HMM:TIGR00757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rne/Rng family ribonuclease"
                     /protein_id="HJN06367.1"
                     /translation="MNRELIIDSNLSEVNIALLEDKNLVELHKEQINNKFTVGDVFLG
                     KVKKIMPGLNAAFVDVGYDKDAFLHYLDLGPQIRTFNKYVKLGLLGKDNLISHETIRR
                     EKDIDKTGKITQVLTSGQQILVQIAKEPISTKGPRISTEISFPGRFLVLLPFSNKVSI
                     SQKIKSKDERNRLKRLITSILPNNYGIIIRTVAENKKVAEIDSDLRNLTEKWESIIKK
                     LSHLKAPYKVLSELDRTSQILRDILNESFNSIYVNDVTLFEETKTYIGTIAPDKKDIV
                     KRYKGRIPIFDHYGIEKQLRSSFGKTVTIKSGVYLVIEHTEALHVIDINSGHRVNKEK
                     SQEENALIVNMEAAVEVARQLRLRDMGGIIVVDFIDLHDAKNRKALHQKLIEEMSKDR
                     AKHTILPPSKFGLVQITRQRVRPEMIVPVLEKCPTCLGTGQIKSSMILIDDIENNLNY
                     LMYDQNEKKLTLAVHPYINAYLTKGSLSTQMRWFMKYK"
     gene            complement(1747..2025)
                     /locus_tag="QF480_07105"
     CDS             complement(1747..2025)
                     /locus_tag="QF480_07105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009135609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HJN06368.1"
                     /translation="MTKAEIVTEIANKTGVEKVAVQAVVESFMETVKDTMVSGENVYL
                     RGFGSFIIKKRAEKTGRNISKNTTIIIPAHNIPAFKPAKTFVNEVKAK"
     gene            2283..2744
                     /gene="ssb"
                     /locus_tag="QF480_07110"
     CDS             2283..2744
                     /gene="ssb"
                     /locus_tag="QF480_07110"
                     /inference="COORDINATES: protein motif:HMM:TIGR00621.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HJN06369.1"
                     /translation="MAGINKVILIGHIGKDPDTFTFDDGTKKISFSLATTESYRDRNT
                     NEWRDQTEWHNIVGYRYLAEKNIAKGDLIYVEGKIKNRKYNDRDGNERYITEILAEKI
                     NMLAHPRGSEGNSGGEADNISKPVSSNASTTEPVEPDQPESSDKPEDDLPF"
     gene            2822..4192
                     /gene="gldE"
                     /locus_tag="QF480_07115"
     CDS             2822..4192
                     /gene="gldE"
                     /locus_tag="QF480_07115"
                     /inference="COORDINATES: protein motif:HMM:TIGR03520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gliding motility-associated protein GldE"
                     /protein_id="HJN06370.1"
                     /translation="MEVVETLAFLPLLNIVLEQFYLGFSPGIVIALLVIIILLFFSGL
                     VSGSETAFFSLTPSDLDSIKVRNGKKDKAILKLLTKPKQLLATILISNNFINVSIVIL
                     STYITVNLFDLQSNKILIFLVQVVVVTSVLLIFGEIIPKILSNREPVAVVTFMVLYLK
                     FLIWFFKPLSSILVNSTSFIDKRVGKKGHNISMSDLSDAIEITSDTSVTDEEKLILKG
                     IATFGEKEASEIMVSRVNITAVDITLGYSDVINVVLKSGFSRIPVYKENLDSISGILY
                     IKDLLLFSDNNINEGWQKLIRKPAFFVPENKRINDLLQEFRDKKIHLAIVVDEYGGTS
                     GIITLEDIIEEIVGEISDEFDVEPLQFKYEKISDKLYVFEAKTPIVDFCKILDVDDEI
                     FDDARGESDSLGGLILEFESKIPDQGSVINFKQFRFEITDADQRKINKIKVFIDNDEL
                     DEKIEQ"
     gene            4173..4772
                     /locus_tag="QF480_07120"
     CDS             4173..4772
                     /locus_tag="QF480_07120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="gliding motility lipoprotein GldD"
                     /protein_id="HJN06371.1"
                     /translation="MRKLNNSLLVAVVLIMASCGQHYTPLPRGYFRIELPKHKYQLSD
                     TLFPYYFEYPEYTSIQSSPHNPDQRYWVNIIYPQFKATVYISYKSIDDNLITYLEDAY
                     TLVSKHIPKADAIDDSLIDDKKRNVFGLTYKIEGSGVASPYQFFVTDSSSHFLRGALY
                     FDIIPNNDSLEPVIDFITKDLEHLINTLEWNNDVVRNED"
     gene            complement(4791..>5969)
                     /locus_tag="QF480_07125"
     CDS             complement(4791..>5969)
                     /locus_tag="QF480_07125"
                     /inference="COORDINATES: protein motif:HMM:NF021021.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M64 family metallopeptidase"
                     /protein_id="HJN06372.1"
                     /translation="MDYYHSGNHDNESYYFDELIEEPYWGGSKVNLVDTFEYGNYYVK
                     VYNNSNDSLLYSRGYSSLFGEWQTTDEANITKRAFSEAVVFPYPKQTVDVVLFSRNHD
                     EIFEEKFRYTVNPENYFIKKDRRLMYPSFAVHVSGDPAKNIDIVILPDGYSNEEMGLF
                     IDDCRLFADGLFDYAPYNDNKDKFNIIGILAPSDDSGNDIPADNVWKKTLLNTGFYTF
                     DSERYCMTMDNKSVRDMAANAPYDQIYILVNNEKYGGGAIYNYYNVSVNSNEKASQIF
                     IHELGHGFAGLADEYYNSSTSYNDFYNLNAEPWEPNITTLVDFDLKWKDLVKKRTPIP
                     TPDTEKYENKVGVFEGGGYVAKGVYRPMHDCLMNSFSGNTFCPVCNKSIQKMIDFYSK
                     "
BASE COUNT         1930 a          958 c         1002 g         2079 t
ORIGIN      
        1 tttgtatttc ataaaccaac gcatttgagt tgataatgaa cctttagtga gataagcatt
       61 aatgtaagga tgaacggcaa gagtcagttt cttttcgttt tggtcgtaca ttaaataatt
      121 gagattgttt tcgatatcat ctattaggat catgcttgat tttatttgtc cggtaccaag
      181 acatgttggg catttttcaa gtacgggtac aatcatttcg ggccttacgc gttgccttgt
      241 aatctgaacc aatccaaatt tgctaggagg aagtatagtg tgtttagccc tgtctttcga
      301 catttcttca attaattttt gatgtaaagc ctttctgttt ttggcatcat gcaaatctat
      361 aaagtcgaca actataatcc ctcccatatc tcttaatcta agttggcgag caacttcaac
      421 agcagcctcc atattaacaa tcagagcatt ttcttcctgt gatttttcct tattcactct
      481 atgtccactg tttatatcaa tgacgtgtaa agcctcagta tgttctataa ctaaataaac
      541 accactttta attgtaacag tttttccaaa ggaactccta agttgttttt caatcccata
      601 atgatcaaaa atgggtattc gtcccttgta cctctttact atatcttttt tatcaggggc
      661 tatggtgcca atataagttt ttgtttcttc aaacagagta acatcgttaa cgtatattga
      721 attaaacgac tcatttaaga tatctcttag tatttgtgat gtgcgatcaa gttcgctaag
      781 tactttataa ggagccttaa gatgagataa ttttttaata atactttccc atttttcagt
      841 aagattacga agatcagaat caatttctgc tacttttttg ttttccgcaa cggtacgtat
      901 aattatacca taattatttg gcaatatgct ggttataaga cgttttaagc gattacgttc
      961 gtctttgctt tttatttttt gtgaaattga tactttattg gaaaatggaa gcaggacaag
     1021 aaatcgtccg gggaatgata tttcagttga aatccgtggc cctttagtag atattggttc
     1081 tttagcaatt tgtactaaaa tttgttgccc agaagtcaat acctgagtta tcttacctgt
     1141 tttatcaata tctttttctc gcctaatagt ttcgtgagaa atcagattat cttttcctaa
     1201 taggccaagt tttacatatt tattgaaagt tcgtatttgc ggaccaaggt caagataatg
     1261 taaaaaagca tctttatcat agcctacatc tacaaaagca gcattaagac cgggcattat
     1321 tttctttacc ttacctaaaa aaacatcgcc aacagtaaat ttgttgttga tttgttcctt
     1381 gtgtaattca actagatttt tgtcctcaag taatgcaatg ttaacttccg ataaattcga
     1441 atcaattatt aattctctgt tcacattgta tatttttaaa taattaaata acactattca
     1501 tagcattatt taataaaata acgttgaaat tgaacggaca aacagcgtgg gtatcgggag
     1561 gaaatgaaat aaaaatatta acacaaggct atagaatggc cttgtgttaa tattgctaaa
     1621 gaaaaaatta tttcttctta tgcctattct tccttaaacg ctttttgcgt ttatgggttg
     1681 ccatcttgtg ccttttcctc ttttttccgt ttggcataat taaatgatgt taatgttaat
     1741 aatgagctat ttggctttta cctcgttaac gaaggttttc gccggtttaa aagcaggaat
     1801 attgtgagca gggataataa ttgtagtgtt cttagaaata tttcgacctg ttttttcagc
     1861 tcttttctta ataatgaaac taccaaatcc tctcaaataa acattctcac cactaaccat
     1921 agtgtcttta acagtttcca tgaaggattc aactacagcc tgtacagcta ctttttcaac
     1981 gcctgtttta ttggcgattt cagttacaat ttctgctttt gtcatctcaa tgttatttta
     2041 aatgattaaa aattagtttt cttgtgtgac cggcaaaagt aatacatttt attaattaat
     2101 atcaaataat cgagtaattt ttatttataa ttacttcttt actaggaatt tctggtttaa
     2161 aggtacacat tattggtttt aactgaatat tttgtttgtg ataagtttga ctttaacggc
     2221 aaatttgaat aaaaaatatc taattttgat tactgaaaat aataaaatta aatttttacg
     2281 gaatggcagg aataaataaa gttattttaa ttgggcatat tgggaaagat cctgatacgt
     2341 ttacatttga tgatggaaca aaaaaaatta gtttttctct ggcaacaact gaaagctata
     2401 gagatagaaa cacaaatgaa tggagagatc aaacagaatg gcacaacatt gttggttaca
     2461 ggtacttagc tgaaaaaaat atagcaaaag gagatctgat ctatgttgaa ggaaaaatta
     2521 aaaacagaaa atacaatgat agggatggta atgagagata tattacagaa atattggctg
     2581 aaaaaataaa tatgcttgca catcccagag gtagtgaagg aaatagcgga ggagaagcag
     2641 ataatattag caagccagtt agcagtaatg cttcaactac tgaacctgtt gaaccagatc
     2701 aacctgaaag ttctgataag ccagaagatg accttccttt ctaaaaatca ggaagttgat
     2761 tcttaagtat aacttttctt agtaattttg ccaggtaatt cttataaaat aataattcat
     2821 tttggaagtt gttgaaacac ttgcttttct accattgtta aatatagttt tagagcaatt
     2881 ctatttaggc ttctcacctg gcatcgtcat agcgctattg gtaattatta ttcttttatt
     2941 tttctcaggt ttagtttcgg gctccgaaac tgcctttttt tctctcacgc cttctgatct
     3001 ggattcaata aaagttagaa atgggaaaaa agataaggca atattgaagc tacttactaa
     3061 acctaaacaa ctactggcaa caatacttat ttccaataat tttattaatg tcagcattgt
     3121 tattttgtct acctacataa ctgtaaactt gtttgatctt caatcgaata aaattctaat
     3181 atttttagtc caggttgtag ttgttacttc tgtcttgctt attttcggag aaatcatccc
     3241 caaaattctc tccaataggg agcctgttgc agttgttaca tttatggtat tatacctgaa
     3301 gtttttaata tggtttttta aacctttaag tagcattctc gtaaattcaa cttcgtttat
     3361 tgacaagaga gttgggaaaa aaggtcataa tatttcaatg agcgaccttt cggatgctat
     3421 tgagattaca tccgacacta gcgttactga tgaggaaaaa ttaatactta aagggattgc
     3481 cacttttggt gagaaggaag caagtgagat tatggtttca cgtgtaaata ttactgctgt
     3541 ggatattaca ttgggttata gcgatgtaat taatgtagtt ctcaaatcag ggttttcacg
     3601 aatacctgta tataaagaaa atctcgatag tatttcaggt atactataca ttaaagattt
     3661 attgcttttt tcggataaca atataaatga aggatggcaa aaacttataa gaaaaccagc
     3721 gttctttgtg cctgaaaaca aaaggattaa tgatcttttg caagagtttc gagataaaaa
     3781 aatacatctg gccattgttg ttgacgaata tggtggaact tctggcatta ttaccttaga
     3841 agatattatt gaagagattg tgggtgagat aagtgatgaa tttgatgtag aaccgcttca
     3901 gtttaaatac gaaaagattt ctgataaact atatgttttt gaagcaaaaa caccaatagt
     3961 tgacttttgt aaaattctcg atgttgatga tgaaattttc gacgatgcaa gaggggaatc
     4021 agactcattg ggaggcctga tacttgagtt tgaaagtaag atacccgacc aaggatccgt
     4081 aattaacttt aagcaattca gatttgaaat tacagatgcc gatcaaagga aaattaataa
     4141 aataaaggtg tttattgata atgacgagct tgatgagaaa attgaacaat agccttttag
     4201 ttgcggtagt tttaattatg gcatcttgtg gccaacatta tactccattg ccacgaggtt
     4261 attttagaat agaacttcct aaacacaagt atcaattatc tgatacgttg tttccatatt
     4321 attttgaata tcctgaatat acttcaatac aaagttctcc gcataacccc gatcaaaggt
     4381 attgggttaa tattatttat ccgcaattta aagcaacagt ttatataagt tacaagagta
     4441 ttgatgataa tttaataact tatcttgaag atgcatatac tttagtgtca aaacatatac
     4501 ctaaagcaga tgcaatagat gatagcctta tagatgataa gaaaagaaat gtttttggat
     4561 taacatacaa aattgagggc agcggtgttg catcacctta tcagtttttt gtaacggaca
     4621 gttcgtcaca ctttctacgt ggtgcacttt attttgatat aataccaaat aacgattcac
     4681 ttgaacctgt tattgatttt attaccaaag atctagagca cctgataaac actttggagt
     4741 ggaataatga cgtggttaga aatgaggatt gaatttaatt aagcgaaaaa ctacttcgaa
     4801 taaaaatcaa tcattttctg tattgattta ttgcaaaccg gacaaaaggt atttccggaa
     4861 aaactattca ttaagcaatc atgcattggt ctgtatacac cctttgccac ataaccacca
     4921 ccttcaaaaa caccaacttt gttctcatac ttttcagtat ctggtgttgg gattggagtt
     4981 ctttttttca ccaaatcttt ccatttgaga tcaaaatcca caagtgttgt aatgtttggt
     5041 tcccagggtt cggcattaag attatagaaa tcgttgtaag aagttgatga attgtaatat
     5101 tcatcagcca gacctgcaaa cccatgtcca agttcatgaa taaaaatctg ggatgctttt
     5161 tcgttgctgt tcacactaac gttataataa ttgtatatgg caccaccacc atacttttcg
     5221 ttgttaacaa gaatgtaaat ctgatcgtat ggtgcgtttg cagccatgtc acgtacgctt
     5281 ttattatcca tagtcataca gtatctttcg ctgtcgaaag tataaaaacc tgtgtttagc
     5341 aatgttttct tccagacatt atcagccggg atatcattgc cagaatcatc ggatggagca
     5401 agaataccga taatgttaaa cttgtcctta ttgtcattgt acggagcata atcaaaaagg
     5461 ccatccgcaa ataatctaca atcgtcaata aatagcccca tttcttcatt tgaatatccg
     5521 tcaggcaaaa tcacaatatc tatatttttg gccggatcac ctgaaacatg cacagcaaac
     5581 gatgggtaca ttaatcgtct atctttcttg ataaagtaat tctcaggatt tacagtatat
     5641 ctgaatttct cttcaaatat ctcatcatga tttctggaga ataatactac atcaacggtt
     5701 tgttttggat atggaaaaac aactgcttca gaaaaagcac gtttagttat attggcttca
     5761 tcagttgttt gccattcccc gaataatgaa gagtaacctc ttgaatatag taaagagtcg
     5821 ttggaattat tatatacctt tacatagtaa tttccatatt caaaagtgtc cactagatta
     5881 actttagaac ctccccaata tggttcttca attaattcat cgaaataata agattcatta
     5941 tcatgattac cactgtggta ataatccat
//
LOCUS       DASCQP010000414         2526 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001534430, whole genome shotgun sequence.
ACCESSION   DASCQP010000414 DASCQP010000000
VERSION     DASCQP010000414.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2526)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2526)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2526
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001534430"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(243..1046)
                     /locus_tag="QF480_07130"
     CDS             complement(243..1046)
                     /locus_tag="QF480_07130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009317769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005216 - monoatomic ion channel activity
                     [Evidence IEA];
                     GO_process: GO:0034220 - monoatomic ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ion transporter"
                     /protein_id="HJN06373.1"
                     /translation="MEEKKLKKQLHDIIFEADTKAGKLFDILLLVTILLSVVIVMLNS
                     VLALHLKYGDVFLFLEWIITIIFTIEYLLRIYSVKKPRKYIFSFYGIIDALSVLPTYI
                     SLFVTGTHFLIVIRMLRLMRVFRVFKLARYVNASNILLVAFINSRRKIVVFLEVVLII
                     VVITGSVMYLVEGPESGFTSIPTSIYWSIVTVTTVGYGDIAPQTVLGQIIASMLMIVG
                     FAIIAIPTSIVGSELVKMKPHKNTQVCRNCQYALHDDDATYCKICAEKL"
     gene            complement(1064..1831)
                     /locus_tag="QF480_07135"
     CDS             complement(1064..1831)
                     /locus_tag="QF480_07135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018335878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02757 family protein"
                     /protein_id="HJN06374.1"
                     /translation="MAVNIRTLLDKKVAQYNNPEFIENDPVSIPHMFTGKEDIEISGF
                     LTAILSWGRRTAIIKSAKQLMMLMDNSPYNFLTKSSEQEFKRFGSFVYRTFNSDDCLF
                     LITALRNIYLHNDGLETIVNKAFNNNNSVLDVIVDLRNAILQTHHLVRSEKHLANPQT
                     GSAAKRINMYLRWMVREDNHGVDFGIWKEIPQSHLMCPLDVHSGNVARKLGLLIRKQN
                     DWKAVEELTRQLRTFDSNDPVKYDFALFGMGVFEGLS"
     gene            1906..2331
                     /locus_tag="QF480_07140"
     CDS             1906..2331
                     /locus_tag="QF480_07140"
                     /inference="COORDINATES: protein motif:HMM:NF025734.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding domain-containing protein"
                     /protein_id="HJN06375.1"
                     /translation="MKNLVIVVLVIAVSLSLLSTTKVENISVNLDTKDVISDSENANS
                     FETPDNIQAIIDNSCYACHNNESKSTKSKKKLNFDKLNDLKVSKQISKLMKITKVVRK
                     GKMPIQKYIDKYPDRKLTSDEAVSLSSWAANSAEKLAGE"
BASE COUNT          936 a          429 c          354 g          807 t
ORIGIN      
        1 ctaatttctt cggtgaatta tacgaaccaa tctaaagaat aacacagact aactattatt
       61 aactaaattg actgacgata aaaatatcag tgatataatt ttattatttt tgttgattat
      121 aatattaaaa taaaagaaat tagataatgt ttgaattgga gattaaacaa ttgattaact
      181 agcccaaata ccgatactta cattaacaac tatttgtact ttataatcgt ttatctcaaa
      241 aattaaagtt tctcagcgca tattttacaa tacgtagcat catcatcatg caatgcatac
      301 tgacagtttc tacaaacctg tgtgtttttg tggggtttca tttttacaag ttcgcttccc
      361 acaatgctag taggaattgc aataattgca aatccaacaa tcataagcat agaagcaatt
      421 atttgtccta gtactgtttg aggagctata tcaccataac caactgttgt aaccgttaca
      481 attgaccaat aaattgaggt gggtatgctt gtaaaccctg attctggccc ttcaaccaaa
      541 tacattacag aaccagtaat aactactata attaggacta cttccaaaaa gacaacaatt
      601 tttcttcggc tattaataaa agcaactaac aatatatttg aggcatttac atatctagca
      661 agcttaaata ccctgaaaac tctcattaac cgaagcatcc taataacaat taagaaatgt
      721 gttccagtta caaacaaact aatataggtt ggtagtacag acaaagcatc tataattcca
      781 taaaaactaa atatatactt gcgaggcttc ttaacggaat atatccttag aagatattct
      841 atcgtaaata ttatggtaat tatccattca aggaataaaa atacatctcc atacttaagg
      901 tgtaatgcta aaacactatt caacattaca attactacag atagtaatat tgttacaaga
      961 agtaggatat caaaaagttt acctgctttt gtatctgctt caaatattat atcgtgtaat
     1021 tgctttttta gttttttctc ttccatacca attttcagct aaattaagaa agtccttcaa
     1081 aaacgcccat tccaaatagg gcaaaatcat acttaacagg atcattcgaa tcaaaagtac
     1141 gcaattgacg agttaattct tcaactgcct tccaatcatt ttgtttccgg ataagtaagc
     1201 ctaattttcg ggcaacatta cccgaatgta catcaagtgg acacatgagg tgggattgag
     1261 ggatttcctt ccaaatacca aaatcaactc catggttatc ttctctcacc atccatcgca
     1321 aatacatatt aatccgcttt gcagcagaac cagtttgcgg attagcaagg tgcttctccg
     1381 agcgtactaa atgatgtgtt tgtagaattg cattgcgcaa atcaactatc acatcaagaa
     1441 ctgaattatt attattaaat gctttattga caatagtttc aagaccatca ttatgtaaat
     1501 aaatattgcg caatgctgta atgagaaaca aacaatcatc agaattaaag gtacgataaa
     1561 cgaaactccc aaagcgtttg aactcttgtt cacttgattt tgttaagaaa ttgtaaggcg
     1621 aattgtccat caacatcatc aattgttttg cacttttaat aattgcagtt cttctccccc
     1681 aggacaatat tgccgttaaa aaaccactga tttcaatatc ctctttacct gtaaacatat
     1741 gaggaatact aacaggatca ttttcaatga attctggatt attgtattga gctactttct
     1801 tgtctaacag agtgcgaata ttaactgcca aaatatgtta tttggaatga atataaataa
     1861 tgtttacttt tgtaactgaa aattatcata aattaaaata aaactatgaa aaatctagtt
     1921 atagttgttt tagtaattgc agtaagtctg agcttactat caactacaaa agtagaaaac
     1981 atctccgtta atttggacac caaagatgtt atttcagact cagaaaatgc taactctttt
     2041 gaaacaccag ataatattca agcaattatt gataactcgt gttatgcttg tcataataat
     2101 gaaagcaagt cgacaaaaag taaaaagaaa ctaaatttcg ataaactaaa tgatttaaaa
     2161 gtaagtaaac aaataagtaa gttaatgaaa atcactaaag ttgttagaaa agggaaaatg
     2221 ccaatacaaa aatatattga taaataccct gatagaaaat taaccagtga cgaagcagta
     2281 tcattatcat catgggccgc aaattcagcg gaaaaacttg cgggcgaata attaattata
     2341 aatgtcgttt ttgtaatttc aataatattt aagttttaca atgattctaa gaactacaag
     2401 atcatgaaaa aagcaatata catatttgtt gccctgctaa ttataattca atctattcct
     2461 gctaacttgc ctgaagtttc atcgaaaaac cctaatgact tgattgcgaa taatagtgat
     2521 attcct
//
LOCUS       DASCQP010000415         2269 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001537147, whole genome shotgun sequence.
ACCESSION   DASCQP010000415 DASCQP010000000
VERSION     DASCQP010000415.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2269)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2269)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2269
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001537147"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..246
                     /locus_tag="QF480_07145"
     CDS             <1..246
                     /locus_tag="QF480_07145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06376.1"
                     /translation="DNSNNYDIVVPVHGNSFIEPLAAYYSTNIIPNLESSIKRNNYKL
                     INFFNVVKHKSIKVDSMPGFSKELFRNFNTPGDLSIT"
     gene            complement(259..1554)
                     /locus_tag="QF480_07150"
     CDS             complement(259..1554)
                     /locus_tag="QF480_07150"
                     /EC_number="2.5.1.76"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019244716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteate synthase"
                     /protein_id="HJN06377.1"
                     /translation="MNHSIPKTKYQLMSVATGNIFNDTGWILDAPGESEPGLVRAVYE
                     KKQLELNDEAFGIYKLADWLPVHKMLQGSYAPITYKSKGLARKLGFSNLYITFSGYWP
                     ERGIKMKTCSFKETEAYSVCGRLDSKTDKILVVASAGNTARAFAQVCSDNKIPLLLCV
                     PEDNLNALWFETPLDNCVKLIASRTGCDYFDAIHLSNLACEMDGFVAEGGAKNIARRD
                     GMGTTMLSATTTIGEIPEYYFQAVGSGTGAIAAWEANLRLIEDGRFGNRKMKLMVSQN
                     FPFHPIYDAWKANSRSLLPIDDIEARKQVEIIDAKVLSNRKPPYSLAGGLFDAMTDAG
                     GDALLATNEEAKIAGNLFLETEGIDIHPAAAIATATLISAVKNKVVKNDSILMINISG
                     GGENKFKKERELHYLKPEIIFDVDPYESEVKEQLNNLMW"
     gene            complement(1641..>2269)
                     /locus_tag="QF480_07155"
     CDS             complement(1641..>2269)
                     /locus_tag="QF480_07155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06378.1"
                     /translation="MNIVDHPEVMKYASEAGCKMIFLGIESELVDQLESTNKKTNVKI
                     GVDNFAKVYDKIHEYGMAVIGAFLYGLETDTKETIENRTRYMINADIDAMQTTVITPL
                     PGTAFFERMQNEDRLIYNNFPDDWAHYDFVEVVFKPKLMTAEGLSKSIYSAWKTLYDD
                     KRLKRKFIDALRLTKNPISATWSYNSDLHYHSLVFEHKKEKLVRNVKL"
BASE COUNT          678 a          446 c          365 g          780 t
ORIGIN      
        1 gataattcta ataattatga tatagtagtt cctgtgcatg gtaattcatt tattgaacca
       61 cttgcagcgt attattcaac taatattatt cccaatttgg agagttcaat aaaaagaaat
      121 aactacaaat taattaactt ttttaatgtg gtaaaacata aaagtattaa agttgattcc
      181 atgcccggtt tctcgaaaga actttttaga aactttaata cccccggtga cttatcaatt
      241 acttaattaa ataaatagtt accacattag attgttgagt tgctctttaa cctcagattc
      301 ataaggatca acatcgaaaa taatttcggg tttaagatag tgtagttcac gctctttttt
      361 aaacttattt tcacctcctc cactgatatt aatcattaaa atactatcgt ttttaacaac
      421 tttgttttta acagcactta ttaatgttgc tgtggctatg gcagcagcag gatggatatc
      481 tattccttcg gtttcaagaa aaagatttcc tgcaatcttt gcttcttcat ttgtagctaa
      541 caatgcatct ccaccagcat ctgtcattgc atcaaacaat cctccagcta acgaatatgg
      601 aggttttctg ttagagagta cctttgcatc aattatttct acttgttttc gtgcttctat
      661 atcatcgata ggaagcaatg atctcgaatt tgctttccag gcatcgtata ttgggtgaaa
      721 cggaaagttt tgagatacca taagtttcat cttcctgttt ccgaatcggc catcttcaat
      781 taaacgcaaa tttgcttccc atgcagcaat agcacccgtt ccacttccaa cagcctgaaa
      841 ataatactca ggaatttctc caatagtagt tgttgctgat agcattgtag tacccatccc
      901 atctcgtctg gcaatatttt ttgcccctcc ctcagcaaca aatccatcca tctcacatgc
      961 taagttcgag aggtgtattg catcaaaata atcacaacca gttctgctgg cgattagttt
     1021 aacgcaatta tcgagtggtg tctcaaacca gagtgcgtta aggttatctt caggaacaca
     1081 taataagagt ggaatcttgt tatcggagca tacctgtgca aaagcacgag cagtatttcc
     1141 agcggaagcg acaacaagaa ttttatctgt tttactatct aaacgcccgc aaactgagta
     1201 ggcttctgtt tctttaaacg agcaagtttt cattttgata ccacgctcgg gccaatagcc
     1261 actaaaagta atatagaggt ttgaaaaccc caattttcta gctaggccct tacttttgta
     1321 agtaattgga gcgtatgatc cttgtaacat tttatgcacg ggtaaccaat cagctaactt
     1381 gtatatccca aacgcttcat cattaagttc tagttgcttc ttttcgtaaa cagctctaac
     1441 taatcctggt tctgattctc caggtgcatc cagaatccag ccagtatcat tgaatatatt
     1501 tccggtagct accgacatta attgatactt agtttttggg attgaatggt tcatgtatat
     1561 ttcattaatt cagttgagca aaaatagaaa atatgactga gtagttgaat tgattggtcc
     1621 aaatcatcaa tattcacaca ttataatttt acattacgta ctaacttttc ttttttgtgt
     1681 tcgaatacta agctgtgata atgaaggtct gaattataag accatgtcgc cgaaattggg
     1741 tttttggtta atctcaacgc atctataaat ttccttttca accgtttatc atcatataag
     1801 gttttccaag cagaataaat tgatttagat agtccttctg cagtcataag ttttggttta
     1861 aaaacgactt ctacaaaatc atagtgagcc caatcatcgg ggaaattgtt gtatattaat
     1921 ctgtcctcat tttgcatacg ttcaaaaaag gccgttcctg gtaatggagt tatgacagtg
     1981 gtttgcattg catcaatatc agcattaatc atgtaccttg tccgattctc tattgtttcc
     2041 tttgtgtcag tttctaaacc ataaagaaat gcaccaataa ctgccattcc atattcgtgg
     2101 attttatcat aaacttttgc aaagttgtcg acaccaatct ttacatttgt ttttttatta
     2161 gtcgattcaa gttgatcaac aagttctgac tcaataccga gaaatatcat cttgcatcca
     2221 gcctctgatg catatttcat cacttcggga tgatcaacaa tattcatcg
//
LOCUS       DASCQP010000416         4636 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001539111, whole genome shotgun sequence.
ACCESSION   DASCQP010000416 DASCQP010000000
VERSION     DASCQP010000416.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4636)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4636)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4636
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001539111"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..3255
                     /locus_tag="QF480_07160"
     CDS             <1..3255
                     /locus_tag="QF480_07160"
                     /inference="COORDINATES: protein motif:HMM:NF015155.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HJN06379.1"
                     /translation="NNFQVYGKYFISNDKRNLIILITPASTNNTASNNILFDGIDDII
                     NNISKNKFKEIRVEYFGNALVSLGNANQIKKDIIITVTLALIVLITVITLFFRRKRTF
                     LIVFIPVLLGALVSLAILFILKKEVSAISLGIGSVLLGISVDYALHIYSHFRQHGSHK
                     LIFKNLSTPIILSSLTTASAFLSLYFINSEALNDLGLFAAISILSAAAFSLVVLPHLL
                     GKNKMSSKLAYTSWIDKLAAFRFSNNSYLKAGIVLATILFAITAQNVSFDADMMKSNY
                     MSSKLKQVEQRLNSVTNVSKKTIYLVSPGKDLHEAIENNMHAANLINKLKDEQTIQNA
                     VVVNNIFPSKTQQEEAIARWNSYWAKHGDKVIEDVSTVATKVGFRKNAFARFNTWLVN
                     DFRTLSHDSTGIINQLFLDNFIIETDTMSAIINVVKVNNTDADINKVYDTFSNEKSAW
                     IIDKRIITSEFVTILKDNFNKLIIISISFVFVILLIAYGRIELTIITMIPMVFSWIWT
                     VGIMGLLGIEFNIFNVIILTFIFGLGIDYSIFIMRGLLIEYKYGIHDISSYKVSVILS
                     GITTLLGIGVLIFAVHPALRSIAIMSIIGILSVIFITFTLLPAIFKWLVTYKKGLRNR
                     PVTILDLIFSLWALFVFVSGSLFLSLLSLVLQITPLPKRSKKTFIHKLFRYLTWFMIY
                     MNFLSKKTIINPDNEDYSKPAIIITNHQSHIDLMLMMLLNHKVVILTNSRNFSSLMYG
                     PALRYAGFIEVDGSYDSILDKVKDQTNQGYSVVVFAEGHRSDTGKLSRFHKGAFYLAN
                     ELNLDILPIITYGQKELLKKSEFLLKRGTVITEFLPRIRLADGNYGSTLRDQAKNVKQ
                     SYETEYLKVVGMLETPAYFSDFIRKNYLYKGPVLEWYTRIKLSMEDNYRLFNELIPKE
                     CVITDLGCGYGYLPYMLNLVSKERRITGIDYDEDKINVATHCAIKTDNVNFITSDITE
                     IELEPADVFIINDVLHYMPEYLQIKVVESCIERLVDNGLIIIRDADKDLKKRHLGTRI
                     TELLSTNIGFNKTKFKLEFVSRSMIETIADNNNINIEIIDNTKRTSNLIYILRK"
     gene            3318..>4636
                     /locus_tag="QF480_07165"
     CDS             3318..>4636
                     /locus_tag="QF480_07165"
                     /inference="COORDINATES: protein motif:HMM:NF013739.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding protein"
                     /protein_id="HJN06380.1"
                     /translation="MTEKYDIIIIGSGLGGLQSGVILSKKGYKVLVLEKNHQIGGSLQ
                     VFRRKGCTFSTGMHYIGNLDEGQTLNKIFKYFNLFEGIEYKRLDSTGFDIFNIGGTEY
                     RFPIGFDNYKKQMYEYFPDEHEAIDIYLEEIDNTINTQDLYLLKNTESASGDVAKYLS
                     LNTWDYVKSITKNSQLRQVLCALNFVYAGVHKKSPFYIHALINYHFITSAYRIVSSTG
                     LIAKKLKDTINENGGTVLTKKGVRSLIIENSKISAVETTDNIKYEAKYFISNIHPAST
                     MDLIGEGLIKKSFRNRLKKKENTMSAFAVHIILKKNSFKYLNANYNYYKRNDVWYASY
                     YDENKWPEHYLLHCIAPENGSEYADCLGLLTHMKYEEVARWKDLPINNRGNDYLNFKN
                     EKAEELIKLATKNFPDLKDNIIDYDVSTPLTYHDYLGSPKGSMYGTL"
BASE COUNT         1631 a          737 c          800 g         1468 t
ORIGIN      
        1 aacaactttc aggtttacgg caagtatttt atttcaaatg acaaacgcaa tttgataata
       61 ttaataacac cggcatcaac aaataataca gctagtaata atatactttt cgatggtatt
      121 gatgacatca ttaataacat ttccaaaaat aaattcaaag aaataagggt agaatatttt
      181 ggaaatgcgt tagtatcact tggaaatgct aatcaaataa aaaaagatat cataataacg
      241 gttacattgg cattgattgt tctgatcact gttataaccc ttttcttcag aagaaaacgt
      301 acttttttaa tcgtttttat tcccgttttg ttgggagcat tggtatcgct ggcaatattg
      361 tttatcctaa aaaaagaagt ctcggcaata tcgttaggta ttggatcagt attgttagga
      421 atatctgttg attatgcatt gcatatatat tctcatttta ggcaacacgg atcgcataag
      481 ttgatcttta agaacctgtc aacaccaatt atattaagca gtcttacaac tgcatctgcc
      541 tttttatcat tgtattttat taattcagaa gctctaaacg atcttggtct atttgctgca
      601 attagcatat taagtgcagc agccttttca ctagtagtcc tgccacacct tcttgggaag
      661 aataaaatga gctctaaact agcctatact agttggattg acaaactcgc agcttttagg
      721 ttttcgaata acagttactt aaaagcggga atcgtattgg caacgatact atttgcaatc
      781 actgcacaga atgtcagttt tgatgctgat atgatgaaaa gtaactatat gagtagcaag
      841 ctgaagcaag ttgaacaaag attaaactca gttactaacg tcagtaaaaa aactatttac
      901 ttagtttctc cagggaaaga tttacatgaa gcaattgaga ataacatgca tgccgcaaat
      961 ctcataaaca aacttaaaga tgagcaaact atacaaaatg cagtagttgt aaataatatt
     1021 tttccatcta aaacacaaca ggaggaagct attgcgaggt ggaatagtta ttgggccaag
     1081 catggagata aggttattga agatgtaagc acagtagcta caaaggtggg tttccggaaa
     1141 aatgccttcg cccgatttaa tacctggtta gttaatgatt tcaggacttt gtcccatgat
     1201 agtaccggaa ttataaatca gctttttctg gataacttca ttatagaaac agataccatg
     1261 tctgctataa ttaatgttgt aaaagtaaat aatactgatg cagatataaa caaagtgtat
     1321 gatactttta gcaatgaaaa aagcgcatgg attattgaca aacgcataat tacaagtgag
     1381 tttgtaacta tactaaaaga taatttcaat aaactcataa ttatctcaat atcctttgtt
     1441 tttgttattc ttctcatcgc ctatggcagg atcgagttaa caattatcac gatgatacct
     1501 atggtcttca gctggatatg gacagttgga ataatggggt tgttaggtat tgagtttaac
     1561 atctttaacg taattattct cactttcatt ttcggacttg gcattgatta tagcatattc
     1621 atcatgcgcg ggctgctcat cgaatataaa tatggtattc atgatattag ttcatacaag
     1681 gtttcagtaa tattatccgg aataaccaca ttacttggaa taggagtatt gatttttgca
     1741 gtacatcctg ctctaagatc tattgccatc atgtcaataa taggaatatt gtcagttata
     1801 tttataacct tcacgttact tccggcaatt tttaagtggc ttgttactta caaaaaggga
     1861 cttagaaaca gacctgttac aatacttgat ctcatttttt cactatgggc cctgtttgtt
     1921 tttgtaagtg gatcactgtt tctttcatta ttatcacttg tgcttcaaat cactcctctt
     1981 ccaaagcgct ctaaaaaaac atttattcat aagcttttca gatatttaac atggtttatg
     2041 atctacatga acttcctttc caaaaagacc atcataaatc ctgataatga agactatagc
     2101 aaaccagcca ttattattac aaaccatcaa tcgcatattg atttgatgct aatgatgcta
     2161 cttaatcaca aagttgttat actaacaaat tctcgaaatt tcagcagcct gatgtatgga
     2221 ccagctctaa gatatgctgg ttttattgaa gttgatggca gttacgattc aattctcgac
     2281 aaagtaaaag atcaaacaaa tcaggggtat tcagtagttg tttttgctga aggtcatcgc
     2341 tctgatacag gaaaattaag tcgatttcat aaaggagctt tttatcttgc aaatgaacta
     2401 aacctcgaca tactgccaat aatcacatat ggccagaaag aattattaaa gaaaagtgaa
     2461 ttcttattaa aaagaggaac agtaattaca gaatttttgc cacgaatcag acttgccgat
     2521 gggaattatg gaagcactct tcgggatcag gcaaaaaatg taaaacagtc ttatgaaacc
     2581 gaatatctaa aggtagttgg tatgttggaa acaccagctt atttcagtga ttttatcaga
     2641 aaaaactatc tttataaagg accggttctt gaatggtata caagaataaa actcagcatg
     2701 gaagacaact atcgtctatt taatgaactt attccaaagg aatgtgtaat taccgatttg
     2761 ggatgtggtt atgggtacct tccatatatg ctaaatcttg taagtaaaga acgacgaata
     2821 actggaattg actatgatga agacaaaatt aacgttgcaa cacattgtgc tattaaaact
     2881 gataatgtaa attttattac ttctgatata actgagattg aacttgagcc agcagatgtt
     2941 ttcatcatta atgatgtatt gcattacatg cctgaatacc tccagattaa agttgttgaa
     3001 tcatgcatcg aaagattagt tgataacgga cttataataa tacgagatgc tgacaaagat
     3061 ttgaaaaaaa gacatttggg gacgagaatc accgagctgc tatcaactaa tattggattt
     3121 aacaaaacca aattcaaatt agaatttgtt tcacgatcaa tgattgaaac tattgctgac
     3181 aataacaata ttaacattga aataatagat aatactaaac gtacatctaa tttaatttat
     3241 attcttagaa agtaagtcat gtcaaatgat ttataatatc atgctatctt tgttttgctt
     3301 tgatttcaca gtttactatg acagaaaaat atgacataat tattatcggt agcggattag
     3361 gtggtttaca aagtggggtt atcctcagta aaaaagggta taaggtgcta gtccttgaaa
     3421 aaaatcacca aattggtggc tcattgcaag tatttagacg caaaggttgc acattcagta
     3481 ccggcatgca ttatattggc aacctcgatg agggtcagac gttgaataaa atatttaaat
     3541 attttaatct ttttgaagga atagaatata agagacttga ttccactgga ttcgacattt
     3601 tcaatattgg aggaactgaa tacaggtttc ccattggctt cgataactat aaaaaacaga
     3661 tgtatgaata tttcccagat gaacatgaag ccattgacat ttatctggag gaaattgata
     3721 atactatcaa cactcaggat ctctatctgt taaaaaatac agaaagtgcg tctggcgatg
     3781 tcgctaagta tttaagtttg aatacatggg actatgtaaa atcaataact aaaaattcac
     3841 aattacgaca ggtgctttgt gcacttaatt tcgtgtatgc aggtgtacac aaaaaatcac
     3901 cattttatat tcatgcacta ataaattatc attttatcac aagtgcatac cgtattgtga
     3961 gcagtaccgg actaatagca aaaaaactaa aagacacaat taatgaaaat ggtggtaccg
     4021 ttttaactaa gaagggagta cgcagcctaa taattgaaaa tagtaaaata agtgcagttg
     4081 aaaccaccga taatatcaag tatgaagcta aatactttat ctccaatatt caccctgctt
     4141 ctacaatgga tttaattggt gaaggattga ttaaaaagtc gttccggaac agattgaaaa
     4201 aaaaggagaa tactatgtct gcatttgcag ttcatattat ccttaagaaa aattcattta
     4261 agtatctaaa tgcgaattac aactactata aacgcaacga tgtttggtat gcatcatatt
     4321 atgacgaaaa taagtggccg gaacattact tgttgcattg tatagctcct gaaaatggaa
     4381 gcgaatatgc cgattgccta ggattactta cccacatgaa atatgaggaa gttgctcgct
     4441 ggaaagattt acctataaac aatcgcggaa atgattatct gaactttaaa aacgaaaaag
     4501 cagaagaact tataaaattg gcaacaaaaa actttcctga tttaaaagac aacatcattg
     4561 attatgatgt atcaactcca cttacttatc atgattatct tggctcacca aagggttcca
     4621 tgtacggtac attaag
//
LOCUS       DASCQP010000417         4775 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001539251, whole genome shotgun sequence.
ACCESSION   DASCQP010000417 DASCQP010000000
VERSION     DASCQP010000417.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4775)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4775)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4775
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001539251"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1136)
                     /locus_tag="QF480_07170"
     CDS             complement(<1..1136)
                     /locus_tag="QF480_07170"
                     /inference="COORDINATES: protein motif:HMM:NF024575.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit"
                     /protein_id="HJN06381.1"
                     /translation="MQFKSIIGQQALINKLIASYNENRVAHTQLFLGNEGSGALAIAI
                     AFAQFLNCTNKIDNDSCGECASCIKFEKLAHPDLHFYFPTATNPSIKKDPRSGLFLVE
                     WRSYLSDSNAYISQKGWYEHLGIGNKQGYIRKDDANELIGKLSLKAYEAKFKIVIIWM
                     VDRMNESASNKLLKTFEEPPDNTIIILIGERYEQLLPTVRSRAQLIKVPPLSDTDIID
                     QLKKEGTEDGIAKDIAMLSNGNWNLAQEIINDAEETQSNFVNFRKWLRLCFQPKNYSE
                     LINFNQEISKLGREKQKSFLNYGLEVIHNSILQNHENGGKIKKAGEELDFSHKFAPFI
                     NDSNRAEMYEILNQAIYHIERNAHAGVLFSDLSFTVVDLITKGR"
     gene            complement(1293..2033)
                     /locus_tag="QF480_07175"
     CDS             complement(1293..2033)
                     /locus_tag="QF480_07175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009133764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase/fumarate reductase
                     iron-sulfur subunit"
                     /protein_id="HJN06382.1"
                     /translation="MDLKLKIWRQTGPDANGKFVVYPVHNISKDASFLEMLDILNEEL
                     VANGEEPVAFDHDCREGICGTCSLFINGRPHGPDESITTCQLHMRKFKDGATIVIEPW
                     RAKPFPIIKDLMVDRSAFDQIMQAGGYVSINTGGVPDANAIPIKKENADLAMDAASCI
                     GCGACVAACKNASAMLFVSAKVSQFALLPQGKIEAKKRVEKMVAKMDDIGFGNCTNTY
                     ACEAECPKDISVTNIARMNREFLVAKVS"
     gene            complement(2058..4004)
                     /locus_tag="QF480_07180"
     CDS             complement(2058..4004)
                     /locus_tag="QF480_07180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004584032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase/succinate dehydrogenase
                     flavoprotein subunit"
                     /protein_id="HJN06383.1"
                     /translation="MTKLDSKIPAGPLADKWTNYKANQNLVNPANKRKIDVIVVGTGL
                     AGGAAAASLSELGFNVKVFCIQDSPRRAHSIAAQGGINAAKNYPNDGDSIYRLFYDTV
                     KGGDYRAREANVYRLAEVSNNIIDQCVAQGVPFAREYGGLLDNRSFGGALVSRTFYAR
                     GQTGQQLLLGAYSALSKEINKGAVKLYTRREMMDIVKINGKARGIIVRDLVTGKLERH
                     GAHAVLLATGGYGNVFFLSTNAMTSNGGAAWKAYKRGAYFADPSFVQIHPTCIPVHGD
                     YQSKLTLMSESLRNDGRIWVPKKKADAEKIQKGELSPVKIPEEDRDYYLERRYPAFGN
                     LVPRDVASRAAKERCDSGHGVGNTGLAVYLDFEDAIKRLGKNVIEARYGNLFQMYEKI
                     VDENPYITPMMIYPAIHYTMGGTWVDYELQSTVPGLFVGGEANFSDHGANRLGASALM
                     QGLSDGYFVLPYTIQNYLADQINIPHFDTNTAEFDHTEKEVQDTIDKLLSIKGNHTVD
                     SIHKRLGHIMWDYVGMARNKEGLEKAISEIKKLRKDFWENVSVPGEKSGMNVELEKAL
                     RLTDFLELGELMARDALDRSESCGGHFREEHKTDEGEAMRDDENYMYVSAWEYKGSDN
                     EPVLHKEPLVYENIEVKQRNYKTA"
     gene            complement(4013..4684)
                     /locus_tag="QF480_07185"
     CDS             complement(4013..4684)
                     /locus_tag="QF480_07185"
                     /inference="COORDINATES: protein motif:HMM:TIGR02046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase cytochrome b subunit"
                     /protein_id="HJN06384.1"
                     /translation="MSVLYSSITKKIWMSLMGLFLMTFLVVHLGINSLLLFDPTRDLF
                     NEVAHFMGTNLIIQVLQWVLFAAFAFHIILGVVLQIQNMIARPKSYKVKASSEDSFFS
                     KYMIHTGIIIFIFLAIHFANFFLKAKVFHGAPEFILNGAPTGIEDMGILVIQLFEIPG
                     YVIGYVIALLILGFHLDHGFQSSFQSLGINHKKYTPFIKGFGHLYSIVITIGYILIPL
                     FIYFT"
BASE COUNT         1421 a          958 c          806 g         1590 t
ORIGIN      
        1 ttacgacctt ttgttatcag gtcgacaaca gtaaagctaa gatcggaaaa tagtactcct
       61 gcatgagcat ttcgttcaat atgatatatt gcctgattaa ggatttcata catttcagct
      121 cggttactat cgttaataaa aggggcaaac ttatgtgaga aatcaagttc ttctccagcc
      181 ttctttattt tacctccatt ttcatgattt tgtaatatag agttatgtat cacttccaat
      241 ccgtagttta aaaaactctt ttgtttttct cgtcctagtt ttgaaatttc ctgattgaaa
      301 tttattaatt ctgagtaatt tttaggttga aaacacaatc tcaaccattt tctgaaattt
      361 acaaaatttg attgagtttc ttctgcgtca ttaataattt cttgggcaag attccagttt
      421 ccattcgaca gcattgcaat atcctttgcg ataccatctt cagttccttc ttttttgagc
      481 tgatcgataa tatcagtatc agatagtggt ggaaccttta taagctgagc tctggatctg
      541 acagttggta gtagttgctc gtatctttca ccgattaata ttattattgt attatcgggc
      601 ggttcctcaa aggtctttaa tagtttgtta gaggctgatt cattcattct gtcaaccatc
      661 catattatca ctatcttaaa ttttgcttcg taggctttga gcgataactt gcctattaat
      721 tcgtttgcat catccttacg tatataacct tgcttatttc caatccccag atgttcgtac
      781 catccttttt gtgagatata agcattacta tcagaaagat atgagcgcca ttcaactaga
      841 aacaaaccag atcttgggtc tttctttata gatgggttcg tagctgttgg gaaataaaag
      901 tgtagatcgg ggtgggcaag tttctcaaat ttaatacagg aagcacactc accacaacta
      961 tcattatcta ttttatttgt gcaatttaaa aattgagcaa atgcaattgc aattgctaaa
     1021 gcacccgagc cttcgtttcc taaaaataac tgggtatgag ctacgcggtt ttcattataa
     1081 ctagctataa gcttgttgat cagagcttgt tgccctatta ttgatttaaa ttgcattagt
     1141 attaaatttc aggattcaaa aataatgatt ttataaacct tctttgtctc atcgattatt
     1201 ttaaatacca aaaaagtggc agcttattaa agttaccact ttttgttatg taaaaattgt
     1261 gttagtccag ttactatgta ttaaatgcaa gcttatgaaa cttttgctac aagaaactct
     1321 ctgttcattc ttgcaatgtt agtaacactt atgtctttag gacattcggc ttcacaagca
     1381 taagtgtttg tacaatttcc aaaaccaatg tcatccattt tagctaccat cttctcaaca
     1441 cgtttttttg cttcaatttt accttgagga agaagtgcaa actgacttac cttggcagaa
     1501 acaaacaaca tggcagaggc atttttacaa gcagctacac aagcaccaca tccaatacag
     1561 gaagctgcgt ccattgcaag gtcagcattt tcctttttaa ttggaatagc atttgcgtca
     1621 ggcacacctc ctgtatttat tgagacataa ccacctgctt gcataatctg atcaaatgct
     1681 gatcggtcta ccatcaggtc ttttataatt gggaatggtt ttgcacgcca aggttcgatt
     1741 acaatagtag ccccatcttt aaatttgcgc atatgaagct gacaagtagt tatagattca
     1801 tcaggaccat gtggccttcc gttaataaat aaactgcatg taccacaaat accttcgcgg
     1861 caatcgtggt caaatgctac aggttcctcc ccgtttgcaa caagttcttc gttcaggatg
     1921 tctaacattt ctaaaaatga agcatctttt gatatattat gtacggggta aactacaaat
     1981 ttaccattgg catccggtcc ggtttgcctc catattttta atttaagatc cattgttcag
     2041 ttttttcatt agttagatta tgctgttttg taattgcgtt gttttacctc aatattttcg
     2101 taaacaagag gttctttgtg tagcacaggc tcgttatcac tacctttata ttcccaagca
     2161 ctaacgtaca tataattttc atcatctcgc atggcttctc cctcatcagt cttatgctct
     2221 tcacggaagt gaccaccaca cgactcacta cgatctagcg catcacgtgc cattagctca
     2281 ccaagttcaa ggaaatctgt taaacgtaat gctttttcta gttcaacatt catacctgat
     2341 ttttcacctg gaacactaac attctcccaa aaatctttcc taagtttttt aatttctgag
     2401 attgcttttt caagtccttc tttgtttcga gccattccaa cataatccca cattatatgg
     2461 cctaaccttt tgtggataga atcaactgta tgatttcctt taatgcttaa taatttatcg
     2521 atagtatcct gaacttcctt ttctgtatga tcaaattcag cggtgttggt atcaaaatgt
     2581 ggaatattaa tttgatctgc caggtaattt tgtatcgtat aaggaagtac gaaatatcca
     2641 tctgataacc cttgcataag agcagaagcc ccgagacgat ttgctccatg atcggagaag
     2701 ttggcttcac caccaacaaa taaaccaggt actgtacttt gtaattcgta atcaacccag
     2761 gtgccaccca ttgtgtaatg tattgcaggg tagatcatca tgggtgtaat gtatggattt
     2821 tcatcaacaa tcttttcata catctggaac aggttaccat acctggcttc gattacattc
     2881 ttacccagac gtttgatggc atcttcaaaa tcaagataaa cagcaagacc ggtattgcca
     2941 acaccatgtc cggaatcgca acgttctttt gcagctcgtg aagctacatc acgtggtacg
     3001 agatttccaa aagcaggata tcttctttca agataataat ctctatcttc ttcaggtatt
     3061 tttacaggag ataattctcc tttttgaatt ttttcagcat cggccttctt tttcggcacc
     3121 caaatcctgc catcatttct taaactttcg ctcattaagg tgagtttact ttgatagtca
     3181 ccatgaaccg gaatacaagt agggtgaatt tgtacaaaac ttgggtccgc aaaataagca
     3241 cctcttttgt atgctttcca agcggcacct ccattagagg tcattgcatt ggtagacaag
     3301 aaaaatacat ttccatatcc accagttgct agcagaacag catgtgcacc atggcgttca
     3361 agtttcccgg taacaagatc tctgacaata atgcccctgg ccttaccatt aatcttcact
     3421 atatccatca tttcacgacg tgtgtacaac ttaacggcac ctttgttgat ctccttgctt
     3481 agagcactat aagctccaag gagtagttgc tgtccggttt gtccgcgtgc ataaaatgtt
     3541 ctggatacaa gtgcgccacc aaatgatctg ttatcaagta atccaccata ttcgcgtgca
     3601 aaaggaaccc cctgtgcaac acattggtcg attatgttgt tactgacttc tgctaggcga
     3661 taaacatttg cctcacgtgc acgataatca ccacctttca cagtatcata aaataatctg
     3721 taaatgctat caccatcgtt tggatagttt tttgcagcgt taatacctcc ttgagcagca
     3781 atactatgcg ctcgacgcgg gctatcctgt atacagaaaa cttttacatt gaaaccaagt
     3841 tctgagaggc ttgcggctgc agctccaccg gcaagtcctg ttcctacaac aataacatca
     3901 atcttacgtt tgttggcagg attgacaaga ttttggttag ccttataatt tgtccattta
     3961 tcggccaatg ggccagctgg tattttagaa tcaagctttg tcatatcttc tattatgtaa
     4021 agtaaataaa caaaggaatt agaatatatc caatagtaat tacaatggaa tacagatgac
     4081 caaatccttt aatgaaaggt gtgtattttt tatggtttat accgagcgac tggaatgaag
     4141 attgaaatcc atggtcgaga tgaaatccaa gtattaataa agcaataaca tatcctatta
     4201 catatccagg tatttcaaat aattgaatta ctaatatgcc catatcttca attccggttg
     4261 gtgcaccgtt caagataaat tcgggtgcac catgaaatac ttttgcttta agaaagaaat
     4321 ttgcgaaatg aatagcaagg aaaataaata ttattatccc agtgtggatc atgtactttg
     4381 agaagaatga gtcttcagat gaagccttta ctttataact ttttggacgg gcaatcatgt
     4441 tctggatctg taatacaaca ccaagaatga tgtggaatgc gaatgctgca aaaagtaccc
     4501 attggagaac ttgaataatt aggtttgttc ccataaaatg ggcaacttca ttgaaaaggt
     4561 ctcgcgttgg atcaaacaag agcaatgaat taatacctaa atgaactacc aaaaaagtca
     4621 tcaggaacaa acccattaac gacatccata tttttttggt aattgaagaa tataacacac
     4681 tcataatagt agaaattaat acattattaa ttcaataatt taatgaaagt aaccaacaaa
     4741 tatatgaaag tattcattgc ttttttttgt ttccc
//
LOCUS       DASCQP010000418         1914 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001542198, whole genome shotgun sequence.
ACCESSION   DASCQP010000418 DASCQP010000000
VERSION     DASCQP010000418.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1914)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1914)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1914
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001542198"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..551
                     /locus_tag="QF480_07190"
     CDS             <1..551
                     /locus_tag="QF480_07190"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN06385.1"
                     /translation="VKVLRNEIFMLEGTSSYYKWGVSSPYNDTTNLSPHYRFVPAGGS
                     SPPGQFTGYYQIKGAVGVSLIEYTFFNKDNPDENVKIVVKFDSSPTAIDENIFKNIWI
                     SEIYPNPATNSVNIDYDLPVEVDEANVKIVNILGSVVKERQIDSRNSNLKIDISDLNG
                     GIYFYSLFVVGEVYRTKKLIIR"
     gene            complement(679..>1914)
                     /gene="metK"
                     /locus_tag="QF480_07195"
     CDS             complement(679..>1914)
                     /gene="metK"
                     /locus_tag="QF480_07195"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005853916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HJN06386.1"
                     /translation="DGVLDEMLRQDPNSKVACETLVTTGLAMIAGEVKTTAYVDLQKV
                     ARGVIRRIGYTKAEYRFDADSCSVLSALHEQSSEINQGVVRATDEEQGAGDQGMMFGF
                     ANKEMENYMPITIELSHDLLFELAKIRREGKEMLYLRPDSKSQVTLEYDDDGKPTRID
                     TIVISTQHDDFDSELNMQNKIKEDVANILIPRVKNQYPEEIQKLFGSNMNLLVNPTGK
                     FVIGGPHGDTGLTGRKIIVDTYGGHGAHGGGAFSGKDSSKVDRSAAYAARHIAKNLVA
                     AGVADEMLVQVAYAIGVNEPVGFYINTYGTAHVRNENGELLTDGEISKIATDIFDMRP
                     FAIVSRFGLKNPIFEKTASYGHFGRDTFSEEIEVFYEDKDTTFKENRNGVNVYTKNVE
                     FFKWEKLDYLDKVKEAFNL"
BASE COUNT          588 a          366 c          328 g          632 t
ORIGIN      
        1 atgtaaaagt attaagaaac gaaattttta tgttagaggg tacaagtagt tattacaaat
       61 ggggggtgtc aagcccatac aatgatacaa ctaacctttc gccacattat cgatttgttc
      121 cagcgggtgg gtccagtcca ccaggtcagt tcacaggtta ttatcaaata aaaggtgctg
      181 ttggagtttc attaatcgaa tacacatttt ttaacaaaga taatcctgat gagaatgtaa
      241 agattgttgt gaagtttgac tcatcaccta ctgccataga tgagaatatt ttcaaaaata
      301 tctggatttc ggagatttat ccgaatcccg ctacaaattc tgtaaacatc gactatgatc
      361 tgcctgtgga ggtagatgaa gcaaatgtca aaattgttaa tatactgggt tcagttgtta
      421 aagaacggca gattgattct agaaatagca atctgaaaat agatatttct gatttaaacg
      481 gaggtattta tttttattca ttatttgttg ttggtgaagt ttatcgtact aagaaactaa
      541 taattagata aattaaattt tgtgacttaa gtatagcaaa aagccccgta tacaaactgt
      601 atgcggggct tttttatatc gtttgtaacc attcaggtcg aagaagatct gaaaagttta
      661 gttagatcaa cataaacctt aaagattaaa tgcttctttt accttatcaa gataatcaag
      721 tttttcccat ttgaagaatt caacattttt ggtataaaca ttaacaccat tcctattttc
      781 cttaaatgtt gtgtctttat cttcataaaa aacctctatt tcttcactaa aagtatctct
      841 gccaaagtgg ccatatgagg ctgttttttc aaaaatggga tttttaagac caaatcggga
      901 aacaatagca aaaggtctca tgtcgaaaat atcagttgct attttggaaa tttcgccatc
      961 tgtaagcaac tcaccatttt catttctaac atgtgctgtt ccataagtgt taatataaaa
     1021 ccctactggt tcattaactc caatagcata tgcaacctga acaagcatct catcagcaac
     1081 tccagctgca actaaatttt tagctatgtg acgggcagca tatgctgccg atctatcaac
     1141 ctttgatgag tcttttcctg aaaaagcccc accaccatga gctccatgtc cgccataagt
     1201 atcaacaata atctttcttc ctgtaagtcc ggtatcacca tgagggccac caatcacaaa
     1261 tttacctgta ggattaacca ataaattcat attgctgcca aacaactttt gtatttcttc
     1321 ggggtattgg tttttaactc ttggaatgag aatatttgca acatcttctt tgattttatt
     1381 ctgcatgttt agctcagaat caaaatcatc atgttgtgta gaaattacaa ttgtatctat
     1441 tcttgttggc ttaccatcat cgtcatattc aagtgtaacc tgagattttg aatcaggacg
     1501 gaggtacaac atctctttgc cttcccgcct gattttagca agctcaaaaa gaagatcatg
     1561 agataattct attgtaatgg gcatgtagtt ttccatttct ttgttggcaa agccaaacat
     1621 cataccctgg tcaccagcac cttgttcttc gtcagtagca cgcactacac cctggttaat
     1681 ctccgatgat tgttcgtgta aagcagagag aactgaacat gaatcggcat caaaacggta
     1741 ctccgctttt gtgtatccaa ttcgtctgat tactcctctg gcaacttttt gtaaatcaac
     1801 atatgcagtg gtttttacct cacctgcaat cattgcaagt ccagttgtta caagtgtttc
     1861 acaagcgact tttgaatttg ggtcctgtcg taacatttcg tcgagaacac catc
//
LOCUS       DASCQP010000419         1741 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001542371, whole genome shotgun sequence.
ACCESSION   DASCQP010000419 DASCQP010000000
VERSION     DASCQP010000419.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1741)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1741)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1741
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001542371"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..389)
                     /locus_tag="QF480_07200"
     CDS             complement(<1..389)
                     /locus_tag="QF480_07200"
                     /inference="COORDINATES: protein motif:HMM:NF019242.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1573 domain-containing protein"
                     /protein_id="HJN06387.1"
                     /translation="MKFKLFTTMCLVAILTVSVFSQTDGSTNKSLTTQITEKGNTISW
                     ESRTYDFKTVEQNKPAIAEFVFTNTSSEPISISRVKSSCGCTVTGYDKAPILPGQESK
                     ITATYNSRKPGSFRKSISVFMSDNSQFT"
     gene            567..>1741
                     /locus_tag="QF480_07205"
     CDS             567..>1741
                     /locus_tag="QF480_07205"
                     /inference="COORDINATES: protein motif:HMM:NF012722.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HJN06388.1"
                     /translation="MTKNRIKIVVLLGGFSLIGIIIFQVFWIYNTFNTSEKQFNQTIR
                     IALYNVAAEMADFNNTQLPNVNPVNQISSNYFVVDLNDVIDPPILEHFLKTEFEHSNI
                     NIDYEYSIYDCENDAMVYGKYVNNSGKNTSRKQISEFQKFVDYNYYFAIRFPTKTAAI
                     LYNMNVWIISGFILITAILFFAYAISVILKQKRLSDIQKDFINNMTHELKTPISTIGI
                     SAKVISDPNISTQPERLTKYASIISEQNKRLENQVEKVLQSTLSEKGRISLEIEKLNV
                     KDILSHIISSFELKAREKNGEITLVTNDSLINIYADKSHFENLIFNLLDNAIKYCSTN
                     PKVIVSATLKDKKINLSIEDNGIGIPPSYQNKIFSKFFRVLKPEGSLYIIAYHETLS"
BASE COUNT          606 a          256 c          276 g          603 t
ORIGIN      
        1 gtaaattggc tattatcact cataaatacg ctgatggatt tacgaaaaga tcctggtttt
       61 cttgaattgt atgtagctgt tatttttgat tcctggccag gcagaatggg agctttgtca
      121 tatcccgtaa cagtacagcc acacgatgat tttacccttg agattgaaat aggttcactg
      181 ctggtatttg taaaaacaaa ttccgctata gcaggtttat tttgctcaac agttttaaaa
      241 tcataggttc tactttccca acttatggta ttgccttttt ctgtgatttg tgttgtaaga
      301 gatttgtttg ttgatccatc tgtttgtgaa aaaacagaaa cagttaaaat ggcgactagg
      361 cacattgtag taaataattt aaatttcata actttttgtt ttaagatttt taattactgt
      421 aaatttatat cgaaacaaat atatttgtat gataagcgat cctatgttaa tgaatttcaa
      481 atctttgtta atgaaatgta aatgcacaga ttattctgaa tttaattttt aattttaccc
      541 caaatgttga aaaagcaggt aatttcatga caaaaaacag aataaaaata gtagttctac
      601 ttggaggttt ttcattgatt gggattatta tctttcaggt tttttggatc tataatacat
      661 ttaacacaag cgagaaacaa tttaatcaaa ccatcagaat agcattatat aatgttgccg
      721 ctgaaatggc agattttaac aatactcaac tacccaatgt aaatcctgta aatcaaatat
      781 cttcaaatta ttttgttgtt gaccttaatg acgtcatcga ccctcctatt cttgagcatt
      841 ttttaaagac cgaatttgaa catagcaata taaatatcga ttatgaatat tcaatttatg
      901 attgtgagaa tgatgcaatg gtttatggga aatatgtaaa taactctggc aaaaatacca
      961 gtaggaagca aatttctgaa tttcagaaat tcgttgatta taattattat tttgcaatac
     1021 gcttcccaac caaaactgct gccattctat ataatatgaa tgtgtggatt atttcaggtt
     1081 ttattttaat tactgctatt ttgttttttg cttatgcaat ttcagtaata cttaagcaga
     1141 agaggctttc cgatatacaa aaggatttta tcaataatat gacgcatgaa ttaaaaacgc
     1201 ctatttcaac aatcggcata tcagcaaaag ttatttcaga tcctaacatc tcaactcagc
     1261 ccgaaagatt gactaaatat gcttccatta tttctgagca aaataagcga cttgaaaacc
     1321 aggtagagaa agttttacag tcaacacttt cagaaaaggg taggataagt ttggaaattg
     1381 agaagcttaa tgtaaaagat atactttccc atataattag cagttttgag ttaaaagctc
     1441 gtgaaaagaa tggtgaaatc accttagtta caaacgattc actaataaat atttatgccg
     1501 acaaaagtca ttttgaaaac cttattttta atttgctcga taatgctatc aaatattgca
     1561 gtactaatcc aaaagtaatt gtttcagcta cattgaaaga taaaaaaatt aatttgtcaa
     1621 ttgaggacaa cgggatagga attcctccat catatcagaa caaaatattc agtaagtttt
     1681 tcagggtgtt aaaaccagaa ggtagtttat atataatcgc ctaccatgag actttaagtg
     1741 a
//
LOCUS       DASCQP010000420         1768 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001543444, whole genome shotgun sequence.
ACCESSION   DASCQP010000420 DASCQP010000000
VERSION     DASCQP010000420.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1768)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1768)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1768
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001543444"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..627
                     /locus_tag="QF480_07210"
     CDS             <1..627
                     /locus_tag="QF480_07210"
                     /inference="COORDINATES: protein motif:HMM:NF017828.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacyl-CoA dehydratase"
                     /protein_id="HJN06389.1"
                     /translation="AYFAGVYYIGPINIGFRGTPEATEYYKELYSEILERVRLGLGPV
                     TPEGEMEEEKFRLVVEGPPNWTSFREFWKLFYDMGTVIVSSSYTRVGGVYKNGFRHDP
                     NRLLESLSEYCMGCYTNMNLQQRVDMLSQEIKDYKADGFLVNSIKSCNSFSAGQLLIM
                     RTLEDRLGVPVGFIESDLVDPRYFSYSNIKNRLESFFQMLEQRKLNVY"
     gene            674..>1768
                     /locus_tag="QF480_07215"
     CDS             674..>1768
                     /locus_tag="QF480_07215"
                     /inference="COORDINATES: protein motif:HMM:NF013986.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BadF/BadG/BcrA/BcrD ATPase family protein"
                     /protein_id="HJN06390.1"
                     /translation="MKRFYLGVDLGSTTSKAIIINEKDEIIGRGITNTRANYRVAVEI
                     AKLEAIFNARFHLLKKQLEGEINQNPKFKKYVDEIEAAFQYLQFKKRSDIFYSALLET
                     AKQSFSDEVKDKIIKHIDNIFNEISPKLKSEFIDGDLATSNQFFRDIMSEKYNEEIEK
                     IEKELFEPMMLTYDKSITPVENEMVEYDFKDLIYSAMDLLKEIHKGRSEKSPKKVSGH
                     FDAEFNILTGNYKKGSYSLKKHIDYISDFEFNIANMVGTGYGRALLPFPEDSIKSEIL
                     CHAFGAHAIFPYTRTVLDIGGQDTKAIQVDKYGLVTSFNMNDRCAAGCGRYLGYIADE
                     FSISLNELGPEALEAEKEVTICSTCTVFAGA"
BASE COUNT          631 a          244 c          355 g          538 t
ORIGIN      
        1 gcttatttcg ctggagttta ttatatcggt ccaataaata ttggttttag agggacacca
       61 gaagcaacag aatattacaa agaactctac agtgaaattc tggaacgtgt tcgtcttggt
      121 ttaggaccag taacacctga aggagaaatg gaagaagaaa aattcagact ggttgttgaa
      181 ggccctccta actggacaag tttcagagag ttttggaaac tgttttatga tatgggaact
      241 gtaatagtat cgtcttcata tacaagagta ggaggggttt ataaaaatgg gttcaggcat
      301 gatcccaata ggttgttaga gagtttatct gaatattgta tgggatgcta tactaacatg
      361 aaccttcaac aaagagttga catgctttct caggaaatca aagattataa agcagacggc
      421 ttcttagtaa attcaataaa gagctgcaat tcattttctg ctgggcagtt actaattatg
      481 agaactcttg aagacagact aggagtacct gttggattta ttgaatcaga tttggtagac
      541 ccgagatatt tttcatattc aaatattaaa aacagacttg aatctttttt ccagatgctg
      601 gaacagagaa agttgaatgt ttattagcag ttactgcaat tgaatactat ttgttaaaca
      661 aaaaagaatt tcagtgaaaa gattttattt aggcgtagat ttaggatcga caacctctaa
      721 agccattatt ataaacgaga aagacgaaat aattggaagg ggaattacaa acaccagagc
      781 aaattatcgt gtagctgttg agattgccaa attagaagca atatttaatg ctagatttca
      841 tttgttaaaa aagcagctag aaggtgagat taatcagaat ccaaaattta aaaaatatgt
      901 tgatgaaata gaagccgctt ttcaatactt acagtttaaa aaaagaagtg atatatttta
      961 ttcggcatta ttagaaacgg caaaacaatc gttttcagat gaagttaaag acaaaataat
     1021 taagcatatt gataatatct ttaatgaaat aagtcctaaa ttaaaatctg aatttatcga
     1081 tggtgacctg gcaacctcaa accaattttt tcgagatata atgagcgaaa agtataatga
     1141 agagattgag aaaatagaga aagaactttt tgaaccaatg atgttgacat atgacaaaag
     1201 tattacacct gtcgaaaatg aaatggtaga atacgatttt aaagatttga tctatagcgc
     1261 catggatttg ctaaaagaaa ttcataaagg tcgttcggaa aaatcaccta aaaaggtaag
     1321 tggccatttc gatgctgagt ttaatatact aactggaaat tataaaaaag gatcctattc
     1381 cttaaaaaaa catattgatt atatttcaga ttttgaattt aatatagcaa acatggttgg
     1441 aactggttat ggacgagctt tgttaccttt tcctgaggat tctataaaat cggagatttt
     1501 gtgtcatgcg tttggagcac atgcaatatt tccttacacc cgaacagtat tagacattgg
     1561 cggacaagat actaaggcta ttcaggtaga taaatatgga ctcgttacca gctttaacat
     1621 gaatgaccga tgcgctgctg gctgtggaag gtatttggga tatattgctg atgaattcag
     1681 tatatctcta aacgagcttg gtccggaagc tcttgaagct gaaaaggaag taaccatttg
     1741 ttcaacttgt actgtttttg ctggagca
//
LOCUS       DASCQP010000421         2462 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001545075, whole genome shotgun sequence.
ACCESSION   DASCQP010000421 DASCQP010000000
VERSION     DASCQP010000421.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2462)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2462)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2462
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001545075"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1853
                     /locus_tag="QF480_07220"
     CDS             <1..1853
                     /locus_tag="QF480_07220"
                     /inference="COORDINATES: protein motif:HMM:NF014910.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HJN06391.1"
                     /translation="EAGYGYHFPVIEDSDIAKVWELRKAGLGILNNMPGDAKPVAVIE
                     DTAINPELLPDYIDKFDKILNKYNKKCVYYAHIATGELHLRPILNLKDPKDVKLFYTL
                     AKEVAELVKRFGGSLSGEHGDGRLRGEFIPTMVGEHNYQLFKQVKQAWDPDNIFNPGK
                     IVDTPKMNTFLRYEPGQETRDIKTVFDFSKDLGILRATEKCNGTGTCRKTEVIGGTMC
                     PSYMVSRNENQSTRARANLLREFLTNSSKANPFDYKEIYEVMDLCLSCKACKSECPSS
                     VDIAKLKAEFLQHYYADNRIPLRTLLIANISKVNKLGSNFPSLFNFFSQNFITSRITS
                     AVFGFTTKRRIPTLSKATLDRWHRLYKEVLNKKSFPNGKVYLFNDEFTRFNDTNIGIK
                     TILLLTKLGYDVVIPEHIESARTYLSKGLVKKAKTIANRNIRLLKDTITDITPFVGIE
                     PSAILTFRDEYIDLADKVLVESAEKLAENSFTIEEFIEKEIRSGKITKEQFTDRKQHI
                     KFHGHCHQKALTGTDSTMYVLNFPTNYTAEEIPSGCCGMAGSFGYEKEHYDMSMKVGE
                     LVLFPAVRNSDERTIIAAPGTSCRHQIADGTKRDSLHPVEILYNALAIKE"
     gene            1881..1954
                     /locus_tag="QF480_07225"
     tRNA            1881..1954
                     /locus_tag="QF480_07225"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1915..1917,aa:Arg,seq:tct)
     gene            2003..2191
                     /locus_tag="QF480_07230"
     CDS             2003..2191
                     /locus_tag="QF480_07230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06392.1"
                     /translation="MESSLLDNKPAEKDVKCIEDTELMVVKSKDLNELYNKKHSFETG
                     GRIIAESLFKNWHQKPFR"
BASE COUNT          858 a          419 c          487 g          698 t
ORIGIN      
        1 aggaagccgg atatggatat catttccctg tgatagaaga ttctgacata gctaaggttt
       61 gggaattacg caaagccggt cttggtatcc tcaacaatat gccgggtgat gcaaagcccg
      121 ttgcagtaat tgaagacaca gctattaacc ctgagctcct acccgattac atagataaat
      181 ttgacaaaat tcttaacaag tataataaga agtgcgttta ttatgctcac atagctaccg
      241 gagaacttca cttacgacct atattaaact taaaagatcc caaagatgta aagctattct
      301 atacactggc aaaagaagta gcagagcttg taaagagatt tggtggttcc ctgagtgggg
      361 agcatggaga tggaaggtta agaggtgaat ttatcccaac aatggttggt gaacacaact
      421 accaattatt caaacaagtt aaacaagcgt gggatcctga taatatattt aatcctggta
      481 aaattgttga cacgcctaaa atgaacacct ttctccgtta cgaaccgggg caggaaacaa
      541 gggatataaa aacagtgttt gatttttcga aagatcttgg catactgagg gcaaccgaga
      601 aatgtaatgg aacaggaact tgtcgtaaaa cagaagtaat tggaggcacc atgtgcccta
      661 gttatatggt aagccgtaat gagaatcaat ctacaagagc aagggcaaat ttattgaggg
      721 agtttttaac taattcatca aaagccaacc cctttgatta caaggagatt tatgaggtaa
      781 tggacctgtg cttatcatgt aaggcatgta agtcagaatg tccatcgagt gtagatattg
      841 caaaattaaa agccgaattc ttacagcatt attatgcgga taatcgtatc ccgttaagga
      901 cattgttaat tgccaatatc tccaaagtga ataagcttgg tagcaatttt ccttcactat
      961 ttaatttttt tagtcaaaac ttcatcacat ccaggatcac ctcagctgtt tttggtttta
     1021 caacaaaacg caggatacca accttgagca aagctacgct cgacagatgg catagattat
     1081 acaaggaagt acttaataaa aagtcatttc ctaatgggaa agtatatttg tttaacgatg
     1141 agtttactcg ttttaatgat acaaatattg ggatcaagac aatattactt cttacaaagc
     1201 tgggatatga tgtagttatt cctgagcata ttgagagtgc gcggacttat ctgtctaaag
     1261 ggttggttaa aaaggccaag actattgcaa accgcaatat aagattactt aaagatacta
     1321 ttactgacat cacacctttt gttggcattg agccatctgc catacttact ttcagggatg
     1381 aatatattga tctggctgat aaagtactgg ttgaaagcgc agagaagctc gccgaaaatt
     1441 catttaccat cgaagagttt attgaaaagg agattaggtc aggaaaaata acaaaggagc
     1501 agttcactga tagaaagcaa catatcaagt ttcacggtca ttgccatcaa aaagccttaa
     1561 ctggaaccga ttctaccatg tacgtactaa atttccctac taactataca gccgaagaga
     1621 tcccatcggg ttgctgtgga atggcaggtt catttggtta cgagaaagaa cactacgata
     1681 tgtcgatgaa agttggggaa ttagtattat ttccggcagt tagaaatagt gatgaaagaa
     1741 ccataattgc tgcacccgga acctcatgcc gacatcaaat agcagacggt acaaaaagag
     1801 actcgttaca ccctgtggaa atactttata atgctttggc gataaaagaa taatttatat
     1861 ttttgcagcc cattaaaaat ggtctcgtag ctcagctgga tagagcagca gccttctaag
     1921 ctgcgggtcg caggttcgag tcctgccggg atcacagatg aatataggcc taacctgaaa
     1981 aggttgggct ttttagttta agatggaatc aagtttactt gataacaaac cagcagaaaa
     2041 agatgtaaaa tgtattgaag acacagagct aatggttgtt aaatcaaaag acttaaatga
     2101 gttgtataat aaaaagcatt cgttcgaaac aggtggaaga ataattgcag aatcattatt
     2161 taaaaattgg catcaaaaac catttcgcta atgcttgatg atgcaaagac aagataccga
     2221 aaactcatta aaaataaacc aacactatta caaagagttc cacaatattt aatagcctct
     2281 tatttaaatg ttacacctga atcattgtgt agaattagaa aaaaaatcag tcattagtgt
     2341 ttcttaccat aggtcaatga aaagtagata cacctcatat tacttttgct tcataattat
     2401 tttataaatt taaaatgtaa tattatgaag acagtaattt ttgttttaag tatcatttta
     2461 ac
//
LOCUS       DASCQP010000422         1537 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001546229, whole genome shotgun sequence.
ACCESSION   DASCQP010000422 DASCQP010000000
VERSION     DASCQP010000422.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1537)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1537)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1537
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001546229"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(213..>1537)
                     /locus_tag="QF480_07235"
     CDS             complement(213..>1537)
                     /locus_tag="QF480_07235"
                     /inference="COORDINATES: protein motif:HMM:NF024627.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="lamin tail domain-containing protein"
                     /protein_id="HJN06393.1"
                     /translation="LLGGTCYDDKTKYKATITSLRSNIYLNHVTVESSHFPFYSEFGT
                     VSILNSRMTSPKTCDLINIKYAKSALVENCDLPGNDYPDTDAIDYDSIYNGIIRNNTI
                     YGFFGLNSDAIDIGEKSSDVLIESNRIFNMTDKGISIGQGSSAIIKNNIIYGCNMGVG
                     IKDSNSFAYIDHNTFYGNTYGIAVYEKSQNSGGGGAEVINCIFSGSIKKPILVDSKSW
                     ISVVNSLSDKKKLDGRENIYGNPEFEDAMNFNFTVKEDSLAHKPGKGKSPDIGAKINI
                     PRKNTPEIVINEINFSPIWKNNPLYWIELYNNSDVDVDLTGWTVKNENHNIYALPQKL
                     IIKKNGYIILTNNYYGFLWHYPNINNVRGVLDDKIITKGDAIMLYDTRMNLVDYVDYK
                     SLLTWPNNLNKTGASLVLKAPSLDSNQKSNWKIDSYSKGTPGIENKSD"
BASE COUNT          481 a          261 c          223 g          572 t
ORIGIN      
        1 ctatttgatc aatctcaatt ggcacatatt tcaataaatc tataggatta ctattcgtaa
       61 taaatatatc attcttaatt cgaattccaa tattttcttt caatatatta tcctggttca
      121 taagtaaata ctatgtcaaa aagaataatt actcatgtta tacatggcca tgtttttgtt
      181 actgaaaata gaatttacat attagatcaa atttagtcag acttgttttc tattccagga
      241 gtacctttag aatatgagtc aattttccag ttgctcttct gattactatc taaagacggt
      301 gcttttaata ctaatgatgc tccagtttta ttgagattat tcggccatgt caagaggctt
      361 ttgtaatcaa cataatctac aagattcata cgtgtatcgt ataacataat agcatctcct
      421 ttagtaatta ttttatcatc taacactcct ctaacgttat ttatgtttgg gtaatgccac
      481 aagaagccat agtaattatt agttaaaata atatatccgt tcttcttaat gattagtttc
      541 tgcggtaaag catagatgtt atgattttca tttttaacag tccagccagt tagatcaaca
      601 tcgacatcag aattgttata aagctcgatc caataaagtg gattattttt ccaaatgggt
      661 gagaagttaa tttcattaat gacaatttct ggagtatttt ttctggggat attaattttt
      721 gcacctatgt ccggagattt accttttcct ggtttatgtg caagtgaatc ctcttttacc
      781 gtgaaattaa aattcatagc atcctcaaat tcaggattgc catatatgtt ttccctaccg
      841 tccaatttct tcttatcact aagtgaattg accacgctta tccaagattt agaatcaaca
      901 aggattggct tttttatcga tccggaaaaa atgcagttaa taacttctgc accaccacca
      961 ccggaatttt gacttttttc gtaaacagct ataccatatg tattaccata aaatgtgtta
     1021 tgatcaatat atgcaaatga gtttgaatct ttaataccca cgcccatgtt acaaccatat
     1081 ataatgttgt tcttaatgat tgcacttgat ccttgtccta ttgagatacc tttgtccgtc
     1141 atattaaata ttcggttact ttctatcaga acgtctgaag atttctcacc aatatcaata
     1201 gcgtcactgt ttaatccaaa aaatccatat atagtattat tcctaattat tccattgtaa
     1261 atactatcat aatctatggc atcagtatca gggtagtcgt ttcctggtaa atcacagttt
     1321 tcgaccaagg cacttttggc atatttaata ttgataagat cgcaggtttt tggagaagtc
     1381 attcttgaat ttagaattga aacagtgccg aattctgaat aaaaaggaaa atgactgctt
     1441 tctacagtaa catgatttaa gtatatatta gaacgtagag atgtaattgt agctttatat
     1501 tttgttttgt catcgtaaca tgttcctcct agtagat
//
LOCUS       DASCQP010000423         1829 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001550463, whole genome shotgun sequence.
ACCESSION   DASCQP010000423 DASCQP010000000
VERSION     DASCQP010000423.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1829)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1829)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1829
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001550463"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1198
                     /locus_tag="QF480_07240"
     CDS             <1..1198
                     /locus_tag="QF480_07240"
                     /inference="COORDINATES: protein motif:HMM:NF012686.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sodium:solute symporter"
                     /protein_id="HJN06394.1"
                     /translation="IITTVLLPLYYRLNLTSIYTYLGIRFGNYAYKTGAVYFLISRII
                     GASFRMFLVVSVLQVFVFDYFNIPFWVTVTIFMGLIQLYTLKGGIKTIIWTDTLQTTF
                     MLIAVITTIFIITKHMDIGIIEAISNVWESDLSRLVITDINSKQNFIKLFLSGIFITI
                     VMTGLDQDMMQKNLSCRNVIDAQKNMTTLSLVLIPVNLIFLFLGGMLFLYSGHFNISP
                     TLSTDHVFPDIAFNYLGTTAGIVFIIGLVSAAYSSADSALTSLTTSFSIDILGLDKKY
                     SNNGKLLKKKRYMVHVSMSIIVIFVIVLFKLINNQAVIAQLFTFAGFTYGPLLGLYSF
                     GLFTKIKTNDKLIPVIAIIAPILSYVISHYSMQFFNGYQIGFELLIINGILTFIGLFM
                     IKTKTT"
     gene            1208..>1829
                     /locus_tag="QF480_07245"
     CDS             1208..>1829
                     /locus_tag="QF480_07245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004301833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine synthetase III"
                     /protein_id="HJN06395.1"
                     /translation="MANFRFTALKRTLDREVIKVNYPSDKASDYFGSMTFNQSVMQEY
                     LTREAYSGVSKAIESGVRIERKITDQVASAMKAWALNKGVTHYTHWFHPLTGSTAEKH
                     DAFINPIENGKALEEFRGSSLIQQEPDASSFPSGGIRSTFEARGYTAWDPTSPAFIVE
                     NTLCIPTIFVSYTGDSLDYKTPLLKSMRALDSTAVEVCKYFDKNIEK"
BASE COUNT          596 a          299 c          314 g          620 t
ORIGIN      
        1 cattataaca accgtgttgt tgcctcttta ttacagatta aaccttactt caatttatac
       61 ttacctcggc atccgattcg ggaattacgc atataaaaca ggggcagtat attttctgat
      121 ttcacgaatt attggtgcat ctttcagaat gttcctggta gtatcagttc ttcaggtatt
      181 tgtattcgat tactttaaca ttccgttctg ggtgacggtt actatcttta tgggattaat
      241 tcaactttat actttaaaag gtggtattaa aacaattatt tggaccgaca cattgcaaac
      301 cacatttatg ctgatcgcag taattacaac aatatttatt attacaaaac acatggatat
      361 tggtataatt gaagctattt caaatgtttg ggaaagtgac ctttcgcgct tagttataac
      421 agatataaac tcaaaacaga attttataaa actgtttcta agtggtatat ttattacaat
      481 tgtaatgact ggacttgatc aggatatgat gcaaaagaac ctgagctgtc gcaatgtaat
      541 agatgcacaa aaaaatatga ctacattaag tttggtgctt attcctgtta acctgatatt
      601 tttgtttttg ggtggaatgt tattcttata ttcaggtcat tttaatattt ctcctactct
      661 ttcaaccgat catgtttttc ctgacattgc gttcaactat cttggaacaa cagctggaat
      721 tgtattcatt ataggacttg tatcagctgc atattcaagc gctgatagtg ccttaacatc
      781 cttaacaaca tcattcagca ttgatatatt agggttggac aagaaatatt caaacaatgg
      841 aaaacttttg aaaaaaaagc gatatatggt tcatgtttcg atgtcaatta ttgttatttt
      901 tgtcatcgtt ctctttaaat taattaataa tcaagctgtt atagcgcaat tgtttacttt
      961 tgcaggtttt acgtacggac cacttttagg tttatactca ttcggcttgt tcacaaaaat
     1021 taaaaccaac gataagctta ttcctgtaat agcaattatt gcaccaattt tatcctatgt
     1081 gataagccat tattcaatgc agttttttaa tggatatcag ataggctttg aactacttat
     1141 aataaatggt attctaacat ttattggatt atttatgata aaaacaaaaa ctacttaaaa
     1201 gaaagaaatg gcaaacttca gatttacggc acttaaaaga acacttgaca gagaagtaat
     1261 taaagttaat taccctagtg acaaagcatc agattatttt ggttcgatga cattcaatca
     1321 gtcggtaatg caagaatact taaccagaga ggcatatagc ggagtcagta aagctattga
     1381 aagtggagtt cgtattgaaa gaaaaataac agatcaagtc gcatctgcaa tgaaagcctg
     1441 ggcattaaat aaaggtgtta cacattatac acactggttt catccgttaa cgggatctac
     1501 agctgagaaa catgatgctt ttatcaaccc tattgaaaat ggtaaggctc ttgaagagtt
     1561 tcgtggaagt tcattaattc agcaagaacc tgatgcatca agttttccaa gcggaggtat
     1621 tagaagtacc ttcgaggctc gtggttatac tgcatgggat cctacctctc cagcatttat
     1681 tgtagagaat actctttgta tcccaacaat ttttgtatca tataccggtg attcgcttga
     1741 ttataaaacc ccactcttaa aatcgatgag agctctggat tcaaccgcag ttgaagtatg
     1801 taaatatttt gacaagaata ttgaaaaag
//
LOCUS       DASCQP010000424         2580 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001555710, whole genome shotgun sequence.
ACCESSION   DASCQP010000424 DASCQP010000000
VERSION     DASCQP010000424.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2580)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2580)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2580
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001555710"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1099
                     /locus_tag="QF480_07250"
     CDS             <1..1099
                     /locus_tag="QF480_07250"
                     /inference="COORDINATES: protein motif:HMM:NF024117.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PD-(D/E)XK nuclease family protein"
                     /protein_id="HJN06396.1"
                     /translation="RLLQRAVNINLIYNTKPDRLGGGEKSRFILQIENELSKSNPLIK
                     LSNKIINTNISKLEEHNKGSEIIKIEKTEQIIQKLIEISNKGFSPSLISSYISCPLKF
                     YFSNILKISTTTGLEKSVEASTFGIVIHAVLEEMYKPLEGKEIKSETLKSGINKTHQL
                     LLNQFKKHYKSSDLNSGKNLLTFEVANNYINNFLRWDIKNIKENPIILQSSEYSYSIN
                     ISHNALNIKFKGIIDRIDKRLDDGTIQIIDYKTGRVLQKDLVVEDPEELTINPDYAKA
                     FQVVYYAWLYNQQQPIEKLEAGIISLRSISEGFISLKIKSINRIQDYFDKFTESILKL
                     VNEIIDPHIPFTQTKDPTQCAWCDYKSICNR"
     gene            1201..1683
                     /locus_tag="QF480_07255"
     CDS             1201..1683
                     /locus_tag="QF480_07255"
                     /inference="COORDINATES: protein motif:HMM:NF012301.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HJN06397.1"
                     /translation="MNIKKYEILLVDDKPENLITLEGILDNPELDIYTASSGNEALGM
                     LLEHNFALVLMDVQMPGMDGFETAEIMQSNERTKHIPIIFVTAISKQRKHIFKGYQAG
                     AVDYLYKPLDLEVLKSKIKAFIEFFKQKTELEETTKILKKTVRELESAKNVAEDATSL
                     "
     gene            1819..2049
                     /locus_tag="QF480_07260"
     CDS             1819..2049
                     /locus_tag="QF480_07260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06398.1"
                     /translation="MLKFKSGAAMVANKLKLKVQPVVIINTKDVLDSQKLTATPGIVK
                     VIYLDAIQADRNTNWFEETEKNMNEVFNKEMN"
     gene            2051..2437
                     /gene="crcB"
                     /locus_tag="QF480_07265"
     CDS             2051..2437
                     /gene="crcB"
                     /locus_tag="QF480_07265"
                     /inference="COORDINATES: protein motif:HMM:TIGR00494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:1903425 - fluoride transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:1903424 - fluoride transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HJN06399.1"
                     /translation="MSLSWQTILAIGTGGFLGAIARAYVVHMSNKHFSYEFPIGILFV
                     NILGSFLIGILFAIFTHYSVNDSLKSFLTTGFLGALTTYSTFAIESFFLLERSFFLGI
                     SNMVLNLLGTVLAARSGYKILHFFIK"
BASE COUNT          979 a          378 c          413 g          810 t
ORIGIN      
        1 cagacttctt caacgtgctg ttaacattaa cctaatctac aataccaaac cagatagact
       61 tggcgggggc gaaaaaagca ggtttattct acaaattgaa aatgaattat ctaagagtaa
      121 tcctctaatt aaattaagta acaagataat taataccaat atttctaaat tagaggaaca
      181 taacaaaggc agtgagataa taaaaattga gaaaaccgaa caaataattc aaaagctgat
      241 agagatttca aacaagggtt tttcaccatc attaattagc tcttatattt cctgtccgtt
      301 gaagttttac ttttctaata ttttaaaaat aagtactacc acgggtctcg agaaatcagt
      361 agaagctagt actttcggta ttgttataca tgctgtactc gaggaaatgt ataaaccact
      421 tgaaggtaaa gaaattaaat cagaaacctt aaaaagcggt ataaataaaa ctcaccaact
      481 actcttaaat caattcaaaa aacattacaa gagcagtgat cttaactctg gaaaaaactt
      541 actaactttt gaagtagcca ataattatat caacaatttt ttacgttggg atattaaaaa
      601 cattaaagag aaccctatca tcctacaaag ttctgaatat agttactcta ttaatattag
      661 tcataatgcc ttaaatatta aatttaaggg aataatagat agaattgaca aaagactgga
      721 tgacggaaca attcaaatta tcgactacaa aactggtaga gtattgcaaa aagaccttgt
      781 agtagaagat cccgaagaac ttacaattaa tcctgactat gccaaagctt ttcaggtagt
      841 ttattatgcc tggttataca accaacagca acctattgaa aaattagagg caggtataat
      901 cagtcttcgt agcatatcag aagggtttat ttcactgaaa atcaaaagca ttaatagaat
      961 tcaggattat tttgataaat ttacagagtc gatcttgaaa ctggttaatg agataataga
     1021 cccacacatt ccatttacac aaacaaagga ccccacccaa tgtgcatggt gtgattataa
     1081 gtcaatttgt aatcgctaaa aaagaattct aacataatta tcactattca atctgcttta
     1141 ttgacaaaaa aaattatttt tgctatagta acaattgttc tcacctttta gtgcgtaact
     1201 atgaacatta aaaagtacga aattctttta gttgacgata agccagaaaa ccttatcaca
     1261 ctagaaggaa tacttgataa tcccgaattg gacatttaca ctgcaagttc cggtaatgaa
     1321 gcacttggga tgcttcttga gcataacttt gccttagttt taatggatgt acaaatgcca
     1381 ggcatggatg gttttgaaac tgcagaaatt atgcaaagca atgaaaggac taaacatatt
     1441 cccataattt ttgtaactgc aattagcaaa caaagaaaac acatttttaa aggctatcaa
     1501 gcaggagctg ttgactatct atataaacca cttgatttgg aagttcttaa aagcaaaata
     1561 aaggctttta ttgaattttt taaacaaaaa acagaattag aggaaaccac taagatactt
     1621 aagaaaactg ttagagaact cgaaagcgca aagaatgtcg ctgaggatgc aaccagtctt
     1681 tagaagttaa ctcttgttaa aactaactta actgtgtaga ctacacattg attatttaat
     1741 tatgtatatt tgagggcatt aaacctcatt aactgattta cttgatattc tagccttaaa
     1801 ctaaaccatg gaaaaaaaat gcttaaattt aaatcaggtg ccgcaatggt tgcaaataaa
     1861 ttaaaattaa aggtgcaacc agtagtaata attaatacaa aagatgtact ggattctcaa
     1921 aaactaactg ctactccagg aatagtaaaa gttatatatt tagatgcaat tcaagctgat
     1981 agaaatacaa attggtttga agagactgaa aaaaacatga atgaagtttt taataaagag
     2041 atgaattaga atgtctttaa gctggcaaac tattttagca ataggaacag gaggcttttt
     2101 aggagcaata gcaagagctt acgttgttca tatgtcaaat aaacatttct cgtatgaatt
     2161 tccaattggt attctttttg taaatatttt aggaagcttt ttaataggga tattatttgc
     2221 tatatttact cactattcag ttaatgattc tttaaaatct tttcttacta cgggtttttt
     2281 aggggcttta acgacatatt caacctttgc aattgagagc ttctttttat tagaaagatc
     2341 atttttttta ggaattagta atatggtttt aaatctactt ggtacagttt tagctgctcg
     2401 aagtggttat aaaatattac atttttttat caaatagata gaagactggc tatacaagtt
     2461 gatttgaatc attttgttta agcttcaaaa agatataata atcgctaaaa ataagataag
     2521 gatttaatat gggtatgcca ggaggtatgg agtggatact aattgcacta gtagtattac
//
LOCUS       DASCQP010000425         6688 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001564087, whole genome shotgun sequence.
ACCESSION   DASCQP010000425 DASCQP010000000
VERSION     DASCQP010000425.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 6688)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6688)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6688
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001564087"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1454
                     /locus_tag="QF480_07270"
     CDS             <1..1454
                     /locus_tag="QF480_07270"
                     /inference="COORDINATES: protein motif:HMM:NF024821.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HJN06400.1"
                     /translation="DESLIEVRMATKLNSENIWFKAYYAKVSRINENYDDYVTAYEEL
                     VADNPFDMNFLYELAFAYQFTGDYKSAITAYDKIESIIGVNERIITQKTEFYTKIGDP
                     ERSIAEYEKLIATNPDDPRYYALMAEYCSKNNLDDKAVWAYNKIVEIDPDDPYVHISL
                     ADYYDKKGEKEKSFNELKQGLSNPVLDLKTKISLLVGYYRGELSSEQKQQALELSEIL
                     KEVHNGDPMANTFYASMLYENGEFQQARILLRDILKSGKVNYATWEQLLFCDLYLDDY
                     DSLVIDSEECIDYFPNYPLPYFFAGAGNFQIKDFVKAKAYFESGKEFVVNNNALLEQF
                     YSSLGDTYNELENYDASYSAYEKVLKLNPLNSIVLNNYAYYLSLRSEDLDKAKQMAEK
                     SVEIDPYNSNNLDTYAWVLYKLQDYKSALEWIEKAYNNSGSSSGVVLEHYGDILFKLS
                     KEDEALKYWKLARQENEYSKLLDKKIQDKKLYE"
     gene            1447..2292
                     /locus_tag="QF480_07275"
     CDS             1447..2292
                     /locus_tag="QF480_07275"
                     /inference="COORDINATES: protein motif:HMM:NF025490.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4292 domain-containing protein"
                     /protein_id="HJN06401.1"
                     /translation="MNKYISKILFLFLVVSLTYIGTSCKSKKHVLKESIKEYGFSYLY
                     ARLLENQIQFNYLNANFSLVYRQEKNKTNLRGQLRMDSDSLIWMSFTPLLGIEAARVM
                     ITNDSIKFLNRLNKTYFTGKFELVDSLLNTTIDFSLLQSLLVGNDLAQYDVNKFRSSV
                     DNGMYRMTIRERRKIKRYIKKGEIETKVLVQQIWLDPETFRITRIDIKEQGEDENKKL
                     QVYYSDYIYVNDQLFPSKIRIEIKSQKSIFIDINFNKVDLNKPLNFPFKIPRKYENLL
                     LMPND"
     gene            2285..3481
                     /locus_tag="QF480_07280"
     CDS             2285..3481
                     /locus_tag="QF480_07280"
                     /inference="COORDINATES: protein motif:HMM:NF013700.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HJN06402.1"
                     /translation="MIRRFYILFIVMIVTFQGYTQESQKQLEAKREKLNKEIAYTNKL
                     LGETQSDRNVTVSQLRLLNVKINQRTDLLATLKSEVYYLNSKIEKTESTLFSLNEELK
                     SLKQKYAKIAWHAFKYKTAYNKLIFLFSAEDFNQAYQRMRYLDQISAFIRTEAERIKN
                     TEKEKNETLNKLKVEKLEKNKLLDIEQNEILELEKEQAQKDQLKSDLLSKERQLRSSI
                     KDKEKQTKKLAQQIQKIISAEIAAKKDVVTGKINELTPSEKKLTSSFTSNKGKLPWPT
                     NRGVISETFGVHKHPVLKKVKTKNNGINILTAKNSDARSVFNGKVVSITKISNTNIAV
                     IIKHGEFFTVYSNLDKVFVNKGDEVDTKELIGSIHTNLKGRTELHFEIWKGTSIQNPA
                     YWVSQK"
     gene            complement(3501..3899)
                     /locus_tag="QF480_07285"
     CDS             complement(3501..3899)
                     /locus_tag="QF480_07285"
                     /inference="COORDINATES: protein motif:HMM:TIGR00738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HJN06403.1"
                     /translation="MANIINFSDAASIGLHSMILIAKSDKPINAIELSKQLGNSKHHI
                     GKVLQRLVKDGLLSSFRGPTGGFIISVDLKDVTLYDVYESIEGKSNIKLCSPDAHFCP
                     VDKCIRKNLIEKLSDEFTSFMTSQKLSEYL"
     gene            4223..5632
                     /gene="xseA"
                     /locus_tag="QF480_07290"
     CDS             4223..5632
                     /gene="xseA"
                     /locus_tag="QF480_07290"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HJN06404.1"
                     /translation="MSEVSEKQSPKKYYSLLELTRSIESVIKKTYTSSYWVKAEIAKL
                     NFYPKSGHCYPDLVEKEKGVVLAQIRATIWAGQFNDINHKFVSITNEPLSDGMTVLVR
                     TTISFHAVYGLGLHIIDIEPSFTLGEMAKEKLLSIERLKKENIFTKNKQLQPALIMQR
                     IAIISVETSKGYHDFTKIISENAWGYCFFQMLFPAILQGKSVINSITQQLNRIKIAQK
                     HFDVVVIIRGGGGDIGLSSYDNFKLAKAVALFPLPIITGIGHATNETVVELVAFKNKI
                     TPTDVGYYLIQKFHNFSVRIQNAQSILINKSKQISNSERLKLENISSIFKNNTDNLIY
                     RNRLNLVKSSFDFRHIALSYIKMKKIKFEDILLRFSQESKQLILLQEKQLHEFENRLT
                     TSVKNFTRSNNIQVSTLSDKLHLLEPKYILKRGYSITTHNGKIVTNPKSLQDNDIVET
                     QTYKGRFKSKVQSIEKSGK"
     gene            5637..5837
                     /gene="xseB"
                     /locus_tag="QF480_07295"
     CDS             5637..5837
                     /gene="xseB"
                     /locus_tag="QF480_07295"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005860969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HJN06405.1"
                     /translation="MMKKDIPYTEAIEELEKIVSSIENEDINVDDLSRKVKRAAELIN
                     ICKDKLHNTEEEVNSILKEINN"
     gene            complement(5843..6499)
                     /locus_tag="QF480_07300"
     CDS             complement(5843..6499)
                     /locus_tag="QF480_07300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009137193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacid CoA-transferase subunit B"
                     /protein_id="HJN06406.1"
                     /translation="MSLDKNGIAKRIAQELEDGYYVNLGIGIPTLVANYVPENIEVVL
                     QSENGLLGIGPFPKKGEADPDLINAGKQTVTTIAGSSFFDSSLSFAMIRGGHVDLTVL
                     GAFEVTDKGDISSWKIPGKMVKGMGGAMDLVAAADNIIVATTHTDRNGNPKLIKECQL
                     PLTGINCVKKIVSDLAVIDVTDKGFKLIERAPGVTVEEILEKTGAPLIVEGEVPEMVL
                     "
BASE COUNT         2465 a         1047 c         1134 g         2042 t
ORIGIN      
        1 ctgatgaatc tctaatagaa gtaaggatgg caacaaagct caactccgaa aatatctggt
       61 ttaaggcgta ctatgcaaaa gtatcgagaa ttaacgaaaa ctatgatgac tacgttacag
      121 cttatgagga attggttgct gataatccat ttgatatgaa ctttctttat gaactagctt
      181 ttgcatatca gtttacaggg gattataaaa gtgcaattac agcgtacgat aagattgaaa
      241 gtattattgg tgtcaacgaa aggataataa ctcaaaaaac agaattttac acgaaaatag
      301 gcgaccctga aagaagtata gctgaatatg aaaaacttat agctactaac cctgatgacc
      361 cgcgatacta tgctttgatg gctgagtatt gttcaaaaaa taaccttgac gacaaagctg
      421 tttgggctta taataaaatt gtggaaatag atcctgatga cccttatgtt cacatttcac
      481 ttgctgacta ttatgataaa aagggagaaa aagaaaagtc atttaatgaa ttgaagcaag
      541 gactttctaa tcctgtactt gatctaaaaa ccaagattag cttattagtt ggttattacc
      601 gtggagagtt aagtagtgaa caaaaacagc aagcgttgga gttatcagag attttaaagg
      661 aggttcataa tggtgaccca atggcaaaca cgttttatgc ctccatgctt tatgagaatg
      721 gtgaattcca acaagcaaga attcttttga gagatattct gaaatcagga aaagtaaact
      781 atgctacctg ggaacaactt ttattttgtg atttatatct tgatgattat gattcactcg
      841 taattgattc agaagagtgt atcgattatt ttccgaatta tccactgcct tatttttttg
      901 ccggagcagg aaattttcaa atcaaagatt tcgtaaaagc caaggcttat tttgaatcag
      961 gtaaggagtt tgttgtgaac aacaatgctc ttttggaaca attttattca tcattaggag
     1021 acacttataa tgagctggaa aattatgatg catcttactc tgcatacgaa aaagttttaa
     1081 agttaaaccc acttaactct attgttctca acaattatgc atattattta tcacttagga
     1141 gtgaggatct cgataaagca aagcaaatgg cagaaaaatc agtagaaatc gatccttata
     1201 acagtaacaa tttggataca tatgcctggg tattatacaa gctacaagat tataaaagtg
     1261 cactcgagtg gatcgaaaag gcttataata atagtggcag ttcaagtgga gttgtattgg
     1321 aacattatgg cgatatctta ttcaagttga gtaaagaaga tgaagctctg aaatattgga
     1381 aacttgctcg ccaggaaaat gagtactcga agcttcttga caaaaaaatt caagacaaaa
     1441 aactttatga ataagtatat tagtaagata ctttttttat ttcttgttgt tagtctgacc
     1501 tacattggaa catcatgtaa atcgaaaaaa catgtgttaa aagagtccat aaaagaatat
     1561 ggattttcat atttgtatgc aagattgctt gagaaccaaa tacagtttaa ttatttaaat
     1621 gcaaatttca gtttggttta taggcaggaa aaaaacaaaa ccaacctacg tggtcaactg
     1681 agaatggata gtgatagcct aatatggatg tcatttactc cacttttagg tattgaggcc
     1741 gcaagggtta tgattacaaa tgattctata aagtttctca atcgacttaa taaaacctat
     1801 tttacaggca aattcgaact tgttgacagc ttgttgaaca ccactattga tttttcatta
     1861 ttgcaatctt tacttgttgg gaacgatctt gctcaatatg atgtgaacaa attcagatca
     1921 tcagtagata atggaatgta tcgtatgacc attcgtgagc gcaggaaaat caaaagatat
     1981 attaagaagg gagaaattga aacaaaggtt ctcgttcagc aaatttggct cgatccggaa
     2041 acatttcgta taacacgtat tgatattaaa gaacagggtg aagacgaaaa taaaaaatta
     2101 caggtttatt atagcgatta catatacgtt aatgatcagt tatttccttc gaaaattcgc
     2161 attgaaatta aatctcaaaa atctattttt attgatatta attttaacaa agtagacttg
     2221 aacaagccat taaattttcc atttaaaata ccacgcaaat acgaaaatct gcttttgatg
     2281 cctaatgatt agacgatttt acatattatt cattgtgatg attgttacct ttcaggggta
     2341 cactcaagaa tcacaaaaac aacttgaagc aaaacgtgaa aaacttaaca aggaaattgc
     2401 atatactaat aaacttctgg gtgaaactca atcggataga aatgtgacag taagtcagct
     2461 aaggttgtta aatgttaaaa ttaaccagcg gactgattta ttagctacct tgaaatcaga
     2521 agtttactat ctaaacagca aaattgaaaa aaccgaatct acacttttta gtcttaatga
     2581 agaattgaaa agtttgaagc agaaatatgc taaaatagca tggcatgcat ttaaatataa
     2641 aacggcctac aataaactta tttttctttt ctctgctgaa gactttaatc aggcgtatca
     2701 acgtatgagg tatcttgatc agattagtgc ttttataaga acagaggctg aacgcattaa
     2761 aaacaccgag aaagagaaaa atgaaaccct aaataagctt aaagttgaaa aattagaaaa
     2821 aaataaatta cttgatatcg aacaaaatga gatattagag ctagaaaaag aacaggcaca
     2881 aaaagaccag ctaaaaagcg atcttctatc aaaagagagg caactaagaa gttctattaa
     2941 ggacaaagaa aagcagacaa aaaaacttgc tcaacaaatt cagaaaatta tttctgcaga
     3001 gatagccgcc aaaaaagatg tagttacagg aaaaattaat gaattaacac cttccgaaaa
     3061 gaagttgaca tcttcattta cttctaacaa aggaaaattg ccatggccaa caaacagggg
     3121 tgtgatatca gaaacatttg gagttcacaa gcatcccgta cttaaaaaag ttaaaacaaa
     3181 aaataatggc attaatattt taacagccaa aaatagtgac gctcgatctg ttttcaatgg
     3241 caaagtagtt agcataacta aaatatcaaa tacaaacatt gctgtgatta ttaaacatgg
     3301 tgagtttttt acagtctatt caaatttaga caaagtgttt gttaataaag gtgatgaagt
     3361 tgatacgaaa gaattgatag ggagtattca taccaattta aaaggtagaa cagaattaca
     3421 ttttgagatt tggaaaggaa cttcaattca aaacccagca tactgggtat cacaaaaata
     3481 gttcctgtaa ttgttcgtat ttataagtat tcactaagtt tttggcttgt cataaacgaa
     3541 gtaaattcat ccgacagttt ctcgataagg ttctttctaa tgcatttatc aacagggcaa
     3601 aaatgagcat caggagagca taatttaata tttgattttc cctcaataga ttcatatacg
     3661 tcataaagtg taacatcctt taggtcaacc gaaattataa acccacctgt tggcccacga
     3721 aacgatgaca gtaaaccatc ctttacaaga cgctgaagta cttttccaat atgatgtttt
     3781 gaatttccaa gctgcttaga taattcgata gcatttatag gcttatcaga ttttgcaatt
     3841 aaaatcatgc tatgaagtcc gattgaagca gcatcagaaa aattaataat atttgccatt
     3901 taatgtaaat tttacctgca aatatacaaa tttgatcaat ttaagcactt aatatcctaa
     3961 ttaataacat attgatatca aggagtatac gaaatattat ttattttata taatttatca
     4021 ggaataattt gaatgatcta tcacactcct taattgataa taacccagtt taactttact
     4081 gaagagaagt tcctgtttta tttattaaat tcgctcatta ttcaaaaaag atttggaaga
     4141 gtaagaaaac ctccaataga tttaagcaga gcaataaaaa tgtattgctg agaatacttt
     4201 agttgagtta tactattaag acgtgtcaga agtaagcgaa aaacaaagcc caaagaaata
     4261 ctactcatta ttggagttaa cacgtagtat tgagtccgtt attaagaaaa cctatacaag
     4321 ttcatattgg gtaaaggctg aaatagctaa acttaatttc tatccaaaaa gtggtcactg
     4381 ttatcctgac ctcgttgaaa aggaaaaggg agttgtgctt gcgcagatac gggctacaat
     4441 ttgggccgga caatttaacg acattaacca taaatttgta agtattacga acgaaccatt
     4501 atcagatggc atgactgttt tagtgaggac tacaataagt tttcacgcag tttatggatt
     4561 gggattacat attattgaca tagaaccgtc gtttactctt ggtgagatgg ccaaagaaaa
     4621 gcttctttca attgagcgtc tcaagaaaga aaatattttc acaaagaaca aacaattaca
     4681 acccgctttg ataatgcaac gaattgctat tatatcagtg gaaactagta aaggatatca
     4741 tgactttact aaaataatta gtgaaaatgc atggggctac tgcttttttc aaatgctttt
     4801 cccggcaatt cttcagggta aaagtgttat taactcaatt actcaacaac taaacaggat
     4861 taagatagcg caaaaacatt ttgatgtagt tgtaatcatc cgtggtggag gtggcgatat
     4921 tggcttaagt agttatgata attttaagct agccaaagca gtagctctat ttcctctgcc
     4981 aataattaca ggtataggac acgccacaaa cgaaactgtt gttgaattag tggcttttaa
     5041 aaataaaata acacctaccg atgtgggcta ttatttaatt caaaagtttc ataatttctc
     5101 tgtaagaata caaaatgcac agagtattct aattaacaaa tccaaacaaa tatcaaatag
     5161 cgaacgatta aagcttgaaa atattagttc aatttttaaa aataatacag ataatcttat
     5221 ttatcgtaac aggcttaatt tggtaaaaag tagttttgat tttcgtcata ttgcattatc
     5281 atatatcaaa atgaagaaga taaaatttga agacatatta ttgaggtttt cacaagaatc
     5341 aaaacaatta attcttctac aggaaaagca gctgcatgag tttgaaaacc gtttgactac
     5401 ttctgtaaaa aatttcacac gatcgaacaa tattcaagtg tcaacactgt cagacaaact
     5461 ccatctacta gaaccaaaat atatattgaa aagaggatat agcattacaa cgcataatgg
     5521 aaaaatagta actaatccca aaagccttca ggataatgat attgtggaaa cacaaactta
     5581 taaaggaagg tttaaaagca aagttcaatc aatagagaaa tctggtaaat aacaaaataa
     5641 tgaagaaaga tattccatac actgaagcca tcgaagagct tgaaaaaatt gtttcaagca
     5701 ttgaaaatga agacattaat gttgatgact tatcacgaaa agtaaaacgt gcagcagaac
     5761 taatcaatat ttgtaaagat aaactgcaca atacagaaga ggaagttaat agtatattga
     5821 aagaaataaa taactgagga acctatagta ccatttcagg aacttctccc tccacaatta
     5881 gaggtgctcc ggttttttct aaaatttctt caacggttac tccaggtgct ctttcaataa
     5941 gcttgaatcc tttatcagtt acatcaatta ctgctaaatc gctaacaatt tttttaacgc
     6001 aatttatgcc tgttaaaggc agttgacatt cttttataag ctttggattt ccatttctat
     6061 cagtatgagt agtggcaaca ataatgttat ctgcggctgc aactaaatcc attgcaccac
     6121 ccatcccttt taccattttt ccaggaattt tccatgagga aatatctcct ttatcagtta
     6181 cctcaaaagc tcctagtaca gttaggtcaa catgaccacc acgtatcata gcaaagctaa
     6241 gcgaagagtc gaaaaaggaa gagccagcta tagtagtaac cgtttgtttt ccggcattga
     6301 tcaaatcagg gtctgcttca cctttttttg ggaagggtcc aatacctaat aacccattct
     6361 cggactgtag tacgacttct atattttcgg gaacataatt ggcaaccaaa gtagggattc
     6421 cgatgcctag atttacgtaa taaccatctt ctaattcctg agctattctt tttgctattc
     6481 catttttatc gagactcatt ttatatatat tttgattttt aataaatatt gaaacttaag
     6541 gacgcattag atagtggccc taatctgttt cataattaat cgctaacggt ttcaaactca
     6601 attctttttt cataatcaac tcctttgaat atcctttgaa caaatatccc tggagtatga
     6661 atctcatttg ggttaagttt acccgtag
//
LOCUS       DASCQP010000426         6913 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001565136, whole genome shotgun sequence.
ACCESSION   DASCQP010000426 DASCQP010000000
VERSION     DASCQP010000426.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 6913)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6913)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6913
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001565136"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..642)
                     /locus_tag="QF480_07305"
     CDS             complement(<1..642)
                     /locus_tag="QF480_07305"
                     /inference="COORDINATES: protein motif:HMM:NF013355.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HJN06407.1"
                     /translation="MANLETTYMGLKLKNPIIVGSSGLTNSIENVIEITKEGAGAVVL
                     KSLFEEQIIQTANRIFEQDELNNYYPEALDYIQNYSAENDIATYLNLITECKAKVDIP
                     IIASINCMTSNEWVNFAKSIEDAGADGLELNIFILPSNPNKSSTDNEKIYFDIVEKVT
                     KIVNIPVALKLSYYFSGLAKTMEMLSWTGIKSLVLFNRFFSPDIDINSFEIKST"
     gene            893..1888
                     /locus_tag="QF480_07310"
     CDS             893..1888
                     /locus_tag="QF480_07310"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013257.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HJN06408.1"
                     /translation="MKKILIIQTASLGDVILSTPLIEKLHHFYPNAHIDFLLKYGYEG
                     ILLKHPKLRHVIVWDKTEKKYKHLKELIKIVRNKKYDLVVNVQRFFSSGLITTFSGAE
                     MKVGFAKNPLSIFFTNRIVHTINTSANSPHETERNLKLIEHLTDSDSFSVKLYPSNQD
                     MALVSQYKTKKYITISPGSLWFTKQFPEQQWVEFLSLIEKDITVYLLGSPKERDLCER
                     IIDKSHHQLSLNMAGKLTFLQSSALMRDAVMNYVNDSAPMHMASAMNAQVAAIYCSTV
                     PEYGFGPLSDNAHVIQTKEQLGCKPCGLHGLKECPKEHFKCAITIKNEQLINLLN"
     gene            1932..2501
                     /locus_tag="QF480_07315"
     CDS             1932..2501
                     /locus_tag="QF480_07315"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: protein motif:HMM:TIGR00057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0061710 - L-threonylcarbamoyladenylate
                     synthase [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HJN06409.1"
                     /translation="MNLEEEINKSVELLKKGKLILYPTDTIWGIGCDATNSKAIQKIY
                     KLKGKSENKGMIVLLDSTEKLKNYLKKVPPLAYDLIENSKSPLTIVYSGPKNLTKKII
                     ANDGTIAIRIVKDEYCTQVISRFEKPIVSTSANFTNQPSALTFRQIDDGIIKGVDHVV
                     SVFQDRVSSIKASTIIKLEDDGTFLILRE"
     gene            complement(2809..3732)
                     /locus_tag="QF480_07320"
     CDS             complement(2809..3732)
                     /locus_tag="QF480_07320"
                     /EC_number="3.1.26.11"
                     /inference="COORDINATES: protein motif:HMM:NF000801.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016891 - RNA endonuclease activity,
                     producing 5'-phosphomonoesters [Evidence IEA];
                     GO_process: GO:0042780 - tRNA 3'-end processing [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease Z"
                     /protein_id="HJN06410.1"
                     /translation="MKYPSRFFVTILGNSSAVPSQNHHPISQLLVYENKYFLIDCGEG
                     TQMQLIKYKIKYHKIDNIFISHMHGDHFFGLIGLISTYHLLGREKDLHIYGPETLKDI
                     IENLLESAYTKPKYKLLFHSLSNDIGTIWEDEQFSVFSFPLNHRIPTWGFKFKEKTRK
                     LLIKKSFVKEFKPSVEEILNIKNGEDYIDTEGKRIINETITHSPPKLLSYAYCSDTKY
                     DESIIEHIKDVTLLYHEATFDNSMQDIADEKFHSTAQDAANIAKKANVGKLILGHFSA
                     RYNDLEKLREEAVSIFKSTFITKEGKQYIIS"
     gene            complement(3855..5639)
                     /gene="rpsA"
                     /locus_tag="QF480_07325"
     CDS             complement(3855..5639)
                     /gene="rpsA"
                     /locus_tag="QF480_07325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007212914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HJN06411.1"
                     /translation="MPEEFDWDALEKKQDNYSTAERTKLEDIYSNSLSSIIEHEVIDG
                     TIVGISDREVVINIGYKSDGIIPFNEFRYNPDIKVGDKVDIYVENQEDPNGQMILSHK
                     KARILKSWDRINEAFDNDEIINGYVKCRTKGGLIVDVFGIEAFLPGSQIDVKPIRDYD
                     IYVDKTMEFKVVKINHEYKNVVVSHKALIEDELEQQRAEIIAKLEKGQVLEGIAKNIT
                     TYGVFIDLGGVDGLIHITDLSWGRIKHPEEIVELDQKLKVVILDFDENKKRIALGLKQ
                     LTPHPWDSLSAELKVGDKIKGKVVVLADYGAFIEIAPGVEGLTHVSEMSWSQHLRTAQ
                     DFLAVGDEVEAVILTLDREERRMSLGMKQLLPDPWSAIRDKYQVNSKHKATIRNFTNF
                     GIFVEIEEGVDGLIHISDLSWSKKIKHPAEFTKIGEEIEVVVLDVDEENRRLSLGHKQ
                     LEENPWDVFETVFTLDSVHQGTIINLHDKGALVSLPYGVEGFAPMRHLKKEDGSNVKA
                     EETLDFKVIEFSKENKKIILSHTRLFEEDPRTAKSKKTEKATSEAQKSKRAVKKVNEK
                     VEKTTFGDLDVLASLKSEIEKEEKAGKK"
     gene            6499..>6913
                     /locus_tag="QF480_07330"
     CDS             6499..>6913
                     /locus_tag="QF480_07330"
                     /inference="COORDINATES: protein motif:HMM:NF014036.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase"
                     /protein_id="HJN06412.1"
                     /translation="MSNTKAQSSNYAFSATKSNKGIVNVPDPRLSKLNDIVHSDKVVH
                     ATVEIVDVPGLAKGASEGEGVGNKFLADIQQTHALIHVLRCFDDDNLPHIEGSVDPVR
                     DLEIVDFELQIRDLDLVERKIQRLDKLTKSGDKDAV"
BASE COUNT         2232 a         1217 c         1077 g         2387 t
ORIGIN      
        1 tgttgacttt atctcaaaac tgttgatatc aatatcggga gagaagaaac ggttgaacaa
       61 aacaaggctc ttaattcccg tccacgaaag catttccatt gtttttgcta atcccgaaaa
      121 gtagtagctt aatttcaacg caactggaat atttacaatc ttcgttactt tttcaacaat
      181 atcgaaatat attttttcat tgtcagtact actcttatta gggtttgatg gtaatatgaa
      241 aatattcaat tcaaggccat cagcacccgc atcttcaatg ctttttgcaa agttcaccca
      301 ttcattacta gtcatacaat ttattgaagc aattataggt atatcaactt ttgctttgca
      361 ttcagtaatt aaattcaagt aagtggctat atcattttca gcactataat tctgaatata
      421 atctaaagcc tctggataat agttgttcaa ttcatcctgc tcaaaaatac gattcgcggt
      481 ttgtattatc tgttcttcaa acagtgattt caaaacaact gcacctgctc cttcttttgt
      541 gatttcaata acattctcaa tggagtttgt taaacccgaa ctgccaacaa ttattgggtt
      601 tttgagcttt aaacccatgt aagttgtttc aagatttgcc atttatctta ataattaatt
      661 ttattgtaaa tagattgttg taaaaatagc aacttatgtc taataataat taaataatga
      721 aaattaaaaa tttgtctaaa taaggcatcg aattttgtaa aagtatgttt cgatataatt
      781 caggactatt attattcaaa caaactgaag aaagcagaac cttaatcgta atctttcatc
      841 gtgtgtatgt atatttgcaa aaaatgatta ttttgaaaat ataaccgtat aagtgaaaaa
      901 aatactcatt atacaaactg cctcacttgg agatgtcatt ctaagcaccc cacttatcga
      961 aaaactacat catttttacc ctaatgcaca tatagatttt ttgttaaaat atggttatga
     1021 agggatactc ctaaagcatc caaaattacg acatgtgatt gtttgggata agacagaaaa
     1081 aaagtacaaa cacttaaaag agctaattaa aattgtcaga aacaaaaagt atgatttggt
     1141 tgtgaacgta caacgttttt tttcttcagg tttaattaca acattctcgg gtgcagaaat
     1201 gaaagtgggg tttgcaaaaa atccactctc aatattcttt acaaatagga ttgtacatac
     1261 aattaataca tctgccaaca gcccacatga aactgaacgt aacttgaaat taattgagca
     1321 tctaacggat agcgattcat tttctgtaaa attgtatccc tcaaaccaag atatggcttt
     1381 ggtctctcaa tataaaacga agaaatacat cacaatttct ccaggctcat tatggtttac
     1441 aaaacagttc cccgaacagc aatgggttga atttttatca ttaattgaaa aagatataac
     1501 ggtttatttg cttggatcgc caaaagaaag agatttgtgc gagagaataa ttgataaatc
     1561 acatcaccag ctaagcctta atatggctgg aaaactaact tttctgcaat catccgctct
     1621 tatgcgtgat gcggtaatga attatgtaaa tgattcggct ccaatgcata tggcctcagc
     1681 tatgaatgcg caagttgctg ctatatactg ttctacggtt cctgaatatg ggttcggacc
     1741 attgtcggat aatgctcatg ttattcaaac aaaagagcaa ttagggtgca agccatgcgg
     1801 attacatggg ctaaaagaat gcccgaagga acatttcaaa tgtgcaataa ctattaaaaa
     1861 cgaacaatta ataaacttac ttaattaaga atattttgta agatagtatt ttcatgtcaa
     1921 tattgagtta tatgaattta gaagaagaaa taaacaagtc ggtagaatta ttgaagaaag
     1981 gaaaattgat actctatcca accgacacaa tatggggaat aggttgtgat gctacaaatt
     2041 caaaagcgat acagaagatt tataagttaa aaggtaaaag tgagaataaa gggatgatag
     2101 tgctcttgga ttctaccgaa aaacttaaaa attatttgaa aaaagtacct ccattagctt
     2161 atgatctaat tgaaaactca aagtcaccgc taacaattgt ttattctgga ccaaaaaatt
     2221 tgactaaaaa aataatagct aatgatggta ctattgcaat tagaatagtt aaagatgaat
     2281 attgtacaca agttataagt aggtttgaga aacctattgt ttcaacttca gcgaacttta
     2341 caaaccaacc ttccgcactg acatttaggc aaattgatga tgggataatt aaaggtgttg
     2401 atcatgttgt atctgttttt caggatcgtg taagttcaat aaaagcatct actattatca
     2461 aacttgaaga tgatggaact tttttgatct taagggaata aacaggataa gatcactctt
     2521 gtcaaaataa attccatcgc ttgatattta gagtaaatct aatgcttaga gaaagcgatt
     2581 aaaatagatt cttggatgtc taatttaaaa ttaactataa tttgacaaat taaaatattg
     2641 tattatattt gcagtgcttg ttttgtttgt ttttcataat tgggcccacc caatggaccg
     2701 cctggtctcg ggtgggtttt tttattgggt tcttcgatac aaagtttaga cgtaagaaaa
     2761 attgattttt ctagcggaga gtaacctgta aacacttata gattttaatt aagaaataat
     2821 atattgcttt ccctctttcg tgataaaagt ggacttgaaa atgctaactg cttcctcacg
     2881 caacttttct agatcattat atcttgccga aaaatgtcct agaattaatt tcccaacatt
     2941 tgctttcttt gcaatatttg ctgcatcctg agcagttgaa tgaaactttt catcagcaat
     3001 atcttgcata ctattatcaa acgtggcctc atgataaagt aatgtaacat ctttaatatg
     3061 ctcaatgatt gactcgtcat acttagtatc agaacaatat gcgtaggata atagttttgg
     3121 aggagaatgt gttattgttt cattaataat tcgcttccct tcggtatcta tataatcctc
     3181 tccatttttt atatttagta tttcttctac cgatggttta aactctttaa caaaactttt
     3241 ctttatgagg agcttccttg ttttctcttt gaatttaaat ccccaagtag gtattcggtg
     3301 attaagtgga aatgaaaaaa ccgagaattg ttcatcctcc caaatagttc caatatcgtt
     3361 acttaaacta tgaaacaaga gcttatactt tggttttgta taagctgact ccagaaggtt
     3421 ttcgattata tcttttaatg tctcaggtcc atagatatgc aaatcttttt ctctacccag
     3481 aagatggtat gttgatatta agccaattaa cccaaaaaaa tgatctccat gcatgtggct
     3541 aataaagatg ttatcaattt tgtgatattt aattttgtac ttaattaatt gcatttgagt
     3601 tccttcacca caatcaatca gaaaatattt gttttcatat actaataatt gactaatcgg
     3661 atgatgattt tgagatggta cagcagaaga gttaccgagt attgttacga agaatctgga
     3721 gggatatttc ataatttcaa atatacggaa atcaatttaa tattgattct tcttctaagt
     3781 tagtagcaaa aaaaaatcct cccattattg agaggattta ttaatatgcc ataaatatat
     3841 ttaagtctcc ttaattactt ttttccggcc ttttcttctt tttcaatttc actttttaaa
     3901 gaagcaagaa catcaaggtc tccaaatgta gttttctcca ctttttcgtt taccttttta
     3961 acagcacgtt tcgatttttg agcttcagaa gtggctttct cagttttctt agatttagca
     4021 gttcttgggt cttcttcgaa aagacgtgta tgtgaaagaa ttatcttttt attctcttta
     4081 gaaaactcaa ttaccttaaa gtccaaagtt tcttcagctt tcacattact tccatcttct
     4141 ttctttaaat gacgcatagg agcgaaacct tcaacgccgt atggaagtga aactaaagca
     4201 cctttatcat gaaggtttat aatagttccc tggtgaactg aatcaagtgt aaacactgtt
     4261 tcaaatacat cccatggatt ttcttcaagt tgtttatgcc caaggcttaa tcgtcggttt
     4321 tcttcatcta catcaagaac tacaacttca atctcttcgc ctatttttgt gaattctgca
     4381 ggatgtttaa tctttttcga ccaacttaaa tcgctgatat gaattaatcc atcaacacct
     4441 tcttcgattt caacaaaaat tccaaagttt gtgaaatttc taatagttgc cttatgcttg
     4501 gaatttacct gatatttatc acgaattgca ctccatgggt ctggcagtag ttgtttcatt
     4561 cctagagaca tccttctttc ctcacgatcc aacgtaagta ttactgcctc aacttcatct
     4621 ccaacggcaa ggaagtcctg agcagtacgt agatgctgtg accatgacat ttcactcaca
     4681 tgagtaagtc cttcaacacc aggcgcaatt tcaataaatg ctccatagtc ggcaagaaca
     4741 acaacttttc ctttaatttt atcaccaact ttcaattcag cacttaacga gtcccaaggg
     4801 tgaggtgtaa gttgttttaa accaagtgca atacgctttt tgttttcatc aaagtcaaga
     4861 attacaactt tcagtttttg atcaagttca acaatttctt caggatgttt aatacgaccc
     4921 caagataggt cggtaatatg aattaaacca tcaacaccac caagatcaat aaatacacca
     4981 taagtagtaa tattttttgc aataccctcg agtacttgtc ctttttcaag tttggcaata
     5041 atttcggctc tttgttgttc aagctcgtct tcaatcagtg ctttgtgaga aacgacaaca
     5101 tttttgtatt catgattgat cttaaccact ttaaattcca tggttttatc cacataaata
     5161 tcataatctc taataggttt aacatcgatt tgtgaaccag gtagaaatgc ttcaattcca
     5221 aaaacatcaa caataagtcc acctttagta cgacatttaa catatccatt tattatctca
     5281 tcattatcaa aggcttcatt aattctgtcc catgatttta ggatacgagc ttttttatga
     5341 gatagtatca tctgaccatt agggtcttcc tgattttcaa cataaatatc aactttatct
     5401 ccaactttga tatcaggatt atacctaaac tcattaaagg ggataattcc atcagattta
     5461 taaccaatat tgattacaac ttcacggtcg ctaatcccaa caatggtacc atcaattact
     5521 tcatgctcaa taatcgaact taatgaattt gaataaatat cctcaagttt ggttctttct
     5581 gcagttgaat aattatcttg ttttttctca agagcatccc agtcaaattc ttcgggtata
     5641 tttgctatcg cttctttttc ctcatcttcg agtttatcag ctacaacttc ttctgtttca
     5701 gcaacaggtt catctgaaga aggttcaaca atattttcta cttcaacatc ttcgttttca
     5761 gcaacaggtt catctttagc tttttcaggt tcatcaacag tagcctcaac agtatcttca
     5821 actgctactt cctttgtttc tgcaacaggt tcttcaataa catcttcggg ctcagtaaca
     5881 ggctcttcat caacaggagt ttcgctaatt tcctcaccta caacttcttc tattttagaa
     5941 tctggtactt cagcaatatc ttcagctaca atatcttttg tttctgtaac tgtctcttca
     6001 ctagtctctg taggaatagc ttcatctgtt ttatcaacag gtatatcaat agtttcttca
     6061 actactacct cttcttcagg ttgtttattt tcttcaggag tttgagctgt tagtttcgtg
     6121 tcgtcagcag gttcagggat ggttttttct aattctgaca ttaataatta attgtgtttc
     6181 taaatcaacc gtccggtact tgtgatttga aaccgattat acttaagtta attattttaa
     6241 gaatttgggt aataacatac tacctaaatt ccggacacct taaaatcggg gtgcaaaagt
     6301 acttatatta attgaaatac aaaaatttat tcaaaactaa ttttaccgga aataattgta
     6361 ctacctttgc cgcgttaatt tcacatatta tagttagcaa acatcagata cacaaatact
     6421 taatataatt attttatgtc cttaaactgt gggataatcg gcttaaccaa tactggcaaa
     6481 acagcaattt ttaattgtat gtcgaataca aaagctcaaa gctccaacta tgcatttagt
     6541 gctaccaaat caaataaagg gattgtaaac gtcccagatc ccagattaag caaacttaat
     6601 gatattgtac attcggataa agttgtgcat gctactgttg agatagttga cgttcctggt
     6661 ttggcaaaag gtgcaagtga gggcgaagga gttggtaata agtttttagc tgatatccaa
     6721 caaactcatg cgttaatcca tgtgttacgc tgttttgatg atgataattt gcctcatata
     6781 gaaggttcgg tagacccagt gagagatctt gaaattgttg attttgagct acaaattcgt
     6841 gaccttgacc ttgttgaaag aaagatacaa aggctcgata agcttactaa gtcaggtgat
     6901 aaagatgctg taa
//
LOCUS       DASCQP010000427         1990 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001566161, whole genome shotgun sequence.
ACCESSION   DASCQP010000427 DASCQP010000000
VERSION     DASCQP010000427.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1990)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1990)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1990
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001566161"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..184)
                     /locus_tag="QF480_07335"
     CDS             complement(<1..184)
                     /locus_tag="QF480_07335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013063257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HJN06413.1"
                     /translation="MATSKNNYCVIMAGGVGTRFWPMSKTSKPKQFIDVLGVGKTLIR
                     LTFERFTNICPPENILV"
     gene            complement(409..1017)
                     /locus_tag="QF480_07340"
     CDS             complement(409..1017)
                     /locus_tag="QF480_07340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06414.1"
                     /translation="MKEEEILKEYLPAKSINQVMKWIVQKNVHLKITRNRSSKLGDYR
                     PPVNHSNHRISINHNLNPFAFLITFVHEMAHLIVWEKFQNKFSPHGIEWKSEYRNLMN
                     TLLEKSIFPDDISTVLSKSIVNSKASSSSDLKLSRMLKKYDKYKLITHLEDLPENAIF
                     QIENGNKFKKGIKKRTRYLCLNLQNKKQYLFHPLTPVEEINN"
     gene            1155..1958
                     /locus_tag="QF480_07345"
     CDS             1155..1958
                     /locus_tag="QF480_07345"
                     /inference="COORDINATES: protein motif:HMM:NF040196.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5777 family beta-barrel protein"
                     /protein_id="HJN06415.1"
                     /translation="MKKVVIVVLVLIISIDSYSQVFGISASKLAVINATTVVRNQLEF
                     EPGFGYYWAKKYYDDNGKLKPLSNTNDSTEVYQELVFRFTYGITDKIEAGMMIASDLS
                     SLSAGIKYTLFTINNFSGGFMAGGTFANQSDIVALNSGIYGKTFSVATGLVFSNEFSE
                     KLSLDFDAQYQWLRDDKVSYSHDFFANAELSYIFKNKNQLIGGFSYVLNNHTHEYDGH
                     QNYLLTLNLGASVETGKTFIFNFLFPITILGRNYNKLNGFSFALTIFLN"
BASE COUNT          635 a          295 c          316 g          744 t
ORIGIN      
        1 caacaagtat gttttcggga gggcaaatat tagtgaagcg ttcaaaggtc agtctgataa
       61 gcgttttgcc aactccaaga acgtcaataa actgttttgg ttttgaagtc ttactcatag
      121 gccagaaacg tgtgcctacg cctcctgcca ttattacgca ataattgttt ttactggttg
      181 ccatagataa tttttagttg taaggaagcc taaagagaaa atcgtttagt tgacattcta
      241 ttattgcaat ataaagcata aatcattatc tatcagatat gttttccgat aaggggcatc
      301 aaaaatacaa aactcgttgg tttattttga tgtaactata ataaaattga gaatagatta
      361 atctttgtca actcttactt taagtcacaa cgtaactttt gtaatatttt aattgtttat
      421 ttcctctact ggtgttaaag gatgaaaaag atattgtttt ttattttgca gatttaaaca
      481 aagataccgc gttctttttt tgattccttt tttaaacttg tttccatttt ctatttgaaa
      541 tatcgcattt tcaggaaggt cttccagatg agtaatcagc ttgtacttat catatttctt
      601 taacattcgt gacaacttta aatcggaact acttgaggct ttgctattta ctatactttt
      661 tgataataca gtactaatgt catcaggaaa gatacttttt tccaacaaag tattcatcaa
      721 atttcgatac tcagatttcc actcaattcc atgaggtgaa aatttatttt gaaatttctc
      781 ccatacaatt aaatgggcca tttcgtgaac aaaggttatt aaaaatgcaa acgggtttag
      841 attatgatta atgctgatgc gatgattaga atgattaaca ggtgggcgat aatcgcctag
      901 cttactactt cgatttcggg ttatcttaag atgcacattc ttttgtacaa tccatttcat
      961 aacttggtta atagattttg caggaagata ttcctttaat atttcttctt ctttcatctt
     1021 gtggacaaag ataaaaagga tgtatcatta tttattaaaa catttccatt aattttacct
     1081 atacaaatta cctatatttt ggtattttct ataatgggtt tatcaggcac ctttgtcaat
     1141 aaaattaatt tgacatgaaa aaagtagtta tagttgttct tgttttaatt atttcaatcg
     1201 attcatattc acaagtattt ggaatttctg cgtctaaact agcagttata aatgctacta
     1261 ctgtagtcag gaatcagttg gagtttgaac ctggttttgg ttattattgg gcaaaaaaat
     1321 attatgacga taatgggaaa ttaaaaccac tttccaatac aaatgatagc actgaagtat
     1381 accaagagtt ggttttcaga tttacttatg gtataaccga taaaattgaa gctggtatga
     1441 tgattgcctc ggatttgagt tccctttcag caggaataaa atacacatta tttacaataa
     1501 ataatttttc gggtggattt atggcaggag gtacctttgc caatcaaagc gatattgttg
     1561 cactaaactc aggtatttat ggaaaaacat tttctgtagc tacaggtttg gtattttcta
     1621 atgaattttc tgaaaaatta tctctcgatt ttgatgctca atatcaatgg ttaagagatg
     1681 ataaggtttc ttactcccac gatttttttg caaatgcaga acttagttat atttttaaaa
     1741 ataaaaatca attgataggt gggttttcat atgttcttaa taatcataca catgagtatg
     1801 atggccacca aaattacttg cttactttaa atcttggagc ttctgtagaa acaggaaaga
     1861 catttatttt taattttttg ttcccgataa caattttagg cagaaactat aataagttaa
     1921 acggctttag ttttgctcta accatatttc ttaattaacc tgttaaacct tataactttt
     1981 cgtaataatc
//
LOCUS       DASCQP010000428         7226 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001569815, whole genome shotgun sequence.
ACCESSION   DASCQP010000428 DASCQP010000000
VERSION     DASCQP010000428.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 7226)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7226)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7226
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001569815"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..2246
                     /locus_tag="QF480_07350"
     CDS             <1..2246
                     /locus_tag="QF480_07350"
                     /inference="COORDINATES: protein motif:HMM:NF019335.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HJN06416.1"
                     /translation="GVWVIYPEIVEVKKTRTKLYISGRVSDKISNEALPYSHVIINGW
                     PSVTDLKGGFSTIFPSEDSLIHVQVSYLGYYVLDTLVSTNRFHDFALIPSSIGLSEVV
                     IVGSKVEKSTQIGVQPGLMKLNHKIAHFLPGYGDNSVLNLIRLMPGILASGEQTSELI
                     IWGSYAGQSKVMFDGYTVYGLKNFNDNISAFNPFLAKDIEIHKGGYDALFGERVGGIV
                     NIVGKNGNTVSPSFTVSLNNMTLNGMVEIPIFKKGSLIIAYRHTYYNLYNPSDMTSLV
                     KRNNDADTTNDVDITIIPDYRFRDLNIKYSTTFNNNDLFYISLHGGFDNFSYSIDDTL
                     VKSILDKKTSEETTQFGGSIYYGNTLKNGNTNNFRLSYSGLNSFYQNDFKQVFPLSNN
                     TEYLADDTIHSKLGELCLEYSNIITINRIHSLESGINLYNNEVKLVEYSFNALTAKHY
                     ESSGRISIYSQDNISIRKNINLKVGFRLNYAPILKKVYFEPRVSASIEPHKNWKINVA
                     FGLYSQFVSLSTIVDEYGNYRYMWVIADNDEVPVLNATHYVLGTSFHNNDFTFSIEGY
                     YKNTTGLTRYINRINANIQDIFHGKAESYGIDILIKKDVLKHSAWIAYSISRTLEHFS
                     YFKKEDTRRAPHDQLHELKLAAMLNFDPIFFSTNYVFGSGFPDNSNSTQSNNSIYSRL
                     DVSLIYKFLNRKVNGEIGFSILNVLNTKNLKYSSFEKIPGNQTNGINILTEAIPFTPT
                     LHLKISM"
     gene            complement(2238..2585)
                     /locus_tag="QF480_07355"
     CDS             complement(2238..2585)
                     /locus_tag="QF480_07355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016278104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HJN06417.1"
                     /translation="MNVEDIRMYCLEKKGVTESFPFDDTTLVFKVVGKMFALVNLDGN
                     LRLNLKCDPEQAIILREHHDSVIPGYHMNKKHWNTILLDETIADRLLMEWIDDSYNLI
                     VENLPKKLKQKLH"
     gene            2770..4317
                     /locus_tag="QF480_07360"
     CDS             2770..4317
                     /locus_tag="QF480_07360"
                     /EC_number="6.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019245259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016874 - ligase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA carboxylase subunit beta"
                     /protein_id="HJN06418.1"
                     /translation="MGIKEKSTDLKKRMRTALKGGGVKAIEKQKAIGKLTARERIIAL
                     LDPKSFHEYDLFVEHAAKDFDMDKKYLPGDGVITGTGNITGQPVCIYAQDFTVAGGSL
                     GWMHAKKITKIMDHALKLKVPLIGINDSGGARIQEGVNSLAGYGEIFFRNTLASGVIP
                     QISVILGPCAGGAVYSPALTDFVFTVEKITKMFITGPEVIKTVLGEEITMEALGGARI
                     HCEETGNAHFYAESEEECFSQVKQLISFIPWNNINKAKRFPKKSPKTRRFKIDSVMPS
                     NAKQPYDVRDLIRAFADDSYFFEIQDLFAKNIVIGFARINGDTVGIVANQPLYLAGVL
                     DVDSSDKAARFVRYCDAFNIPLVTLVDLPGYLPGVDQEHAGVIRHGAKLLYAYSEATV
                     PKITLITRKAYGGGYIAMCSHHLRADFVFAWPNAEIAVMGPEGASNIIFRKEIMTAAD
                     PAIMRKEKVAEYKTKFANPYVAAAYGYVDAVIEPDETRKMLIHALDISKDKKVQLPNK
                     KHGIPPF"
     gene            4330..4656
                     /locus_tag="QF480_07365"
     CDS             4330..4656
                     /locus_tag="QF480_07365"
                     /inference="COORDINATES: protein motif:HMM:NF012584.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HJN06419.1"
                     /translation="MANEEKKIRFSSIDIDGVKYKTLLTHKFKQRKKYEEYNPGKVRA
                     FIPGIITEIFFKQKRNVKEGDIILILDAMKMMNKVIAPMDGELKLFVKKKDVVSKNQV
                     LFEIKI"
     gene            complement(4701..5324)
                     /gene="yihA"
                     /locus_tag="QF480_07370"
     CDS             complement(4701..5324)
                     /gene="yihA"
                     /locus_tag="QF480_07370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004290834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTP-binding protein
                     YihA/YsxC"
                     /protein_id="HJN06420.1"
                     /translation="MKINYADFIISSTDVGKCPIPDKPEYAFIGRSNVGKSSLINMIT
                     GRKKLAKISSTPGKTILINHFIINNQWYLVDLPGYGFAKRSKTERLKWEKMIRKYILN
                     RPNMLTLFLLIDIRIEPQQIDLEFIEWLGISSIPFVIAFTKADKLKTNQLASNIKTYK
                     NKLSESWEELPPIIVTSSTNNLGRDKLLEFIENTNKVYRNDTKLKGL"
     gene            complement(5338..6267)
                     /locus_tag="QF480_07375"
     CDS             complement(5338..6267)
                     /locus_tag="QF480_07375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018711889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HJN06421.1"
                     /translation="MKTIIPPVDKRLLEKELNPDRFLKKTNNGNNEIYLVSEMDSPNV
                     VREIGRLREVTFRDAGGGTGEELDLDSFDKGEYAFKQLVLWDPNDKELIGGYRFIYCE
                     HLEIDKDGSIKSPTASLFKYSRTFIKDYFPFTIELGRSFVQPLYQPTFNLRRGMYALD
                     NLWDGIGAVIVDNPEIKYLFGKVTMYPHFDTLARDMILFFLEKYFPDNEKLIYPIDPL
                     MIGTSKKILNNIFAGCNYDEDYKTLIQKVRKLGENVPPLVNAYMNLSATMKTFGTAVN
                     HHFGDVEETGILLTVEDIFADKKDRHLTSNKKK"
     gene            complement(6383..>7226)
                     /locus_tag="QF480_07380"
     CDS             complement(6383..>7226)
                     /locus_tag="QF480_07380"
                     /inference="COORDINATES: protein motif:HMM:NF039989.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HJN06422.1"
                     /translation="NPERVDIEKVLSDKSPLLKRFLPGFMVSYLKRLIHQDTLNLFLQ
                     NHGHISGIEFIEALLTDLNTKLDISGLNNIPKDGRYIIASNHPLGGIDGLALMLAVGK
                     VRKDLVFPVNDILMNIENLRPLFIPINKHGSNAQNIKILNDTFASDKIICYFPFGLVS
                     RKRKGKIMDIEWKNTFISKAKKYKRDIIPTHIGGRNSNFFYNLSNIRKAIGIKANIEM
                     LFLVNEFIKQRNSTLKITFGSPISYSTFDNRHTKAEWAEILRQYSYSLDTGYNELIGK
                     ELGV"
BASE COUNT         2410 a         1168 c         1227 g         2421 t
ORIGIN      
        1 atggtgtttg ggttatttat cctgaaatag ttgaggtaaa aaaaaccaga acaaagctat
       61 atatatcagg ccgtgtgtca gataaaatta gcaatgaggc tctaccgtat tcccatgtga
      121 tcattaacgg ttggccatca gttactgacc tcaaaggagg cttttcaact atatttccat
      181 cagaggatag tttaattcat gttcaagttt cttatctggg ttactatgtt cttgacacat
      241 tagtatcaac aaatcgtttt catgattttg ccctgattcc atcaagtata ggattatctg
      301 aggtagttat agttgggagt aaagttgaga aatcaacaca aataggtgtt caaccaggat
      361 taatgaaact aaaccataag attgcacatt ttttaccagg ttatggtgat aattcagtac
      421 taaaccttat tcgacttatg ccaggaatac tcgcctctgg cgaacaaacc agtgaactga
      481 ttatttgggg aagttatgct ggtcaaagta aagttatgtt tgatggatat actgtttacg
      541 gcctaaaaaa tttcaatgat aatatcagtg catttaatcc ttttttagcg aaggacattg
      601 aaattcataa aggtgggtat gatgcactgt ttggagaacg ggttggagga atagtaaata
      661 tagtcgggaa aaacggaaac acggtatcgc catcatttac agttagctta aacaatatga
      721 cgttaaatgg gatggtagaa attcctatct ttaaaaaagg ttcattaatt attgcataca
      781 ggcatacgta ttataatctg tataatccgt ctgatatgac atcattggtt aaacgcaata
      841 atgatgctga tacgacaaat gatgttgata taactataat acctgattat agatttaggg
      901 acctcaacat aaaatactca acaacattta acaacaacga tcttttctat attagtcttc
      961 atggtggctt tgataatttt tcgtattcaa ttgatgatac cttagttaag agtatacttg
     1021 acaagaaaac cagtgaagaa accactcaat ttggtgggtc gatatattat ggtaacacat
     1081 taaaaaatgg aaatacaaat aacttcagac taagttattc cggattaaac tcattttatc
     1141 agaatgattt caaacaagta tttccactat caaataatac agaatacctt gctgacgata
     1201 cgattcacag taagctggga gagttatgtc tggaatacag caacataatt acaattaatc
     1261 gtattcattc actcgaaagt ggtattaact tatataacaa tgaagttaag cttgtggaat
     1321 attcttttaa cgccttaact gcaaaacatt atgaatcttc aggtaggata agtatctatt
     1381 cgcaggataa tatttcaata cgtaagaata ttaatctaaa agtcggtttc aggttaaatt
     1441 atgcgccaat cttaaaaaaa gtatattttg aaccaagagt ttcagcatcc attgagccac
     1501 ataaaaactg gaaaataaat gtagcatttg gactttatag tcagtttgtt tcattaagca
     1561 caattgttga tgagtatggt aattacagat atatgtgggt tattgctgat aatgatgagg
     1621 ttccagtatt gaatgcaaca cattatgtac ttggtacatc atttcataat aatgatttca
     1681 catttagtat tgagggttat tataaaaata ctaccggatt aaccagatat attaatcgta
     1741 taaatgcaaa tattcaggat atattccatg gcaaagcaga gagttatggt attgatatac
     1801 tgataaaaaa agatgtgtta aaacattctg catggattgc ttattccata agtcgaacac
     1861 ttgagcattt tagctacttc aagaaagaag atactaggag ggctcctcac gatcagctcc
     1921 atgaattaaa actagcagca atgttaaatt tcgatcctat tttcttttcc acaaattatg
     1981 tttttggatc aggatttcca gacaattcta actctacaca aagcaataat tcaatataca
     2041 gccgattaga tgtgtcatta atttacaagt ttcttaatcg taaagtgaat ggtgaaatag
     2101 gtttttcaat attaaatgta ttaaatacaa aaaatctaaa gtattctagt tttgaaaaaa
     2161 tacccggaaa tcaaacaaat ggcatcaata ttcttactga agctattcct ttcactccta
     2221 ctttacactt gaaaatatca atgtaatttt tgcttcagct tttttggcaa attttctaca
     2281 ataagattgt aagaatcatc gatccattcc attaacaatc gatccgctat agtttcatct
     2341 agtagaatcg tattccaatg tttcttattc atatgatatc ctggtattac agaatcatga
     2401 tgttcacgca aaataattgc ctgttcaggg tcacacttca aattcaacct tagattacca
     2461 tcaagattaa ctagggcaaa cattttacct actaccttga ataccaatgt tgtatcatca
     2521 aaagggaagc tttcggtaac tccttttttt tcaagacaat acattcttat atcctcaaca
     2581 ttcattaggt cttatttaat tgattataat gtagttaaat atttttcttt cactaaacag
     2641 tataaaatac cttgctttat tgctattttg atatactttt gcaaaggtag agataagttt
     2701 tccaatgagg aaagaaagcc cttaaggctg agcttatctc tttttttgtg aacccaaaac
     2761 taatctatta tgggcatcaa agaaaaatca acagatctta aaaaacgtat gcgtacggct
     2821 ttaaagggag gtggtgtaaa agccattgaa aaacaaaaag ccattggtaa acttacagcg
     2881 agagagagaa ttattgcact tctcgatcca aaatcttttc atgagtatga tttatttgta
     2941 gaacatgctg caaaggattt tgatatggat aaaaagtact tacccggtga tggtgtaatt
     3001 actggtacgg gtaatattac tggacaacct gtatgtattt atgctcagga ttttacagtt
     3061 gccggcggat cgttaggatg gatgcatgca aaaaagatca caaaaataat ggatcatgca
     3121 ttaaaactga aagttccatt aattggaatt aatgattcag gtggagcacg tattcaggaa
     3181 ggggttaact cgttggcagg ttatggtgag atatttttcc gtaatacgct tgcttcgggg
     3241 gtaattcctc aaatatctgt tatactaggg ccatgcgcag gtggtgcagt ttattcacct
     3301 gccctaaccg attttgtttt tactgtggaa aaaataacca agatgtttat tacaggacct
     3361 gaagtgatta aaacggtact tggtgaggag attacgatgg aggctttagg tggtgcaagg
     3421 atacactgcg aggagacagg gaatgctcat ttttatgcag aaagcgaaga ggaatgtttt
     3481 agtcaggtaa aacaacttat cagttttatc ccgtggaaca atattaacaa ggcaaaacgc
     3541 tttccaaaaa agtcacctaa aacaagacgt tttaagattg atagtgtaat gccttcaaat
     3601 gcaaagcagc cttacgatgt aagggatttg ataagagctt ttgctgacga ttcatatttc
     3661 tttgaaattc aggatttatt tgcaaagaac attgtaattg gtttcgctag aataaatgga
     3721 gatactgttg gtattgttgc aaatcagccc ctttatcttg ctggtgttct tgatgttgac
     3781 tcatcggata aggcagcacg ttttgtgcga tattgtgacg cttttaatat tccactggta
     3841 acactagttg acctcccggg atacttacca ggagttgatc aggaacatgc cggtgtaatt
     3901 cgtcatggcg caaaattact atatgcttat tcagaagcaa cagtgccaaa aattacatta
     3961 ataactcgta aagcttatgg tgggggctat atagctatgt gttcgcatca ccttagagct
     4021 gattttgttt ttgcttggcc taatgctgaa attgccgtta tgggacctga aggtgcttca
     4081 aatattattt tccggaaaga aattatgaca gccgctgatc ccgcaataat gcgtaaagaa
     4141 aaggttgctg agtataaaac aaaattcgca aatccatatg ttgctgctgc ttatggttat
     4201 gttgatgcgg taattgaacc agatgaaaca cggaaaatgc tgattcatgc tcttgatatc
     4261 tcaaaggata aaaaagttca acttcccaat aaaaaacatg ggattccacc gttttaatcc
     4321 ggatatgtta tggcaaacga agaaaaaaaa atacggttta gttcaattga tattgatggt
     4381 gtaaagtata agactcttct tacgcacaaa tttaagcagc ggaaaaaata cgaagaatat
     4441 aatcccggaa aagttcgggc atttattcct ggtattatta ccgaaatttt ttttaagcaa
     4501 aaacgaaatg taaaagaagg tgacattata cttattcttg atgcaatgaa aatgatgaat
     4561 aaagtaatag caccaatgga tggtgaatta aaactttttg tgaagaaaaa agatgtggtg
     4621 agtaaaaatc aagttctttt tgaaataaaa atttaacctt tatctaatcc aaggtcacaa
     4681 ttaccaaaca tttatttacc ttacaagccc ttcagtttag tatcatttct atatacttta
     4741 ttagtatttt caatgaactc aagtagttta tctcttccca aattatttgt tgatgatgta
     4801 acaattattg gaggaagttc ttcccagctt tcggatagct tatttttata tgtttttata
     4861 ttagaagcta gctgatttgt tttgagttta tcagctttgg taaaagcaat aacaaatggg
     4921 atacttgaaa ttccaagcca ttcaataaac tcaagatcta tttgttgagg ttctatccta
     4981 atatcaatta gcaaaaataa agtaagcata tttggtctgt ttaaaatata ctttcttatc
     5041 atcttttccc atttcaaacg ttctgttttc gatcgttttg caaatccgta accgggtaag
     5101 tcaactaaat accactggtt gttaataatg aaatggttta ttaatattgt ttttccggga
     5161 gttgaggata ttttagcaag tttctttctg ccggttatca tattaattaa cgatgattta
     5221 ccaacgttcg acctcccaat aaatgcatat tcaggcttat caggaatagg gcactttcct
     5281 acatcagttg agcttattat aaaatcggca taattaatct tcatgaagac taaaatttta
     5341 ttttttttta ttcgatgtaa gatgtctatc cttcttatca gcaaaaatat cttcaacagt
     5401 gagaagtatt ccggtttctt caacatctcc aaaatgatga ttaactgctg tgccaaaagt
     5461 tttcattgtt gccgacaaat tcatatacgc atttacaagt ggaggtacat tttcgccaag
     5521 tttacgtacc ttttgaatta gtgtcttata atcttcatca taattacatc ctgcaaaaat
     5581 attattcaat attttttttg atgttcctat cattaatgga tcaataggat aaattagctt
     5641 ttcattatca gggaaatact tttctaaaaa aaataatatc atatctcgtg ccaaggtatc
     5701 gaaatgagga tacattgtta ctttgccaaa caaatattta atttctggat tatctacaat
     5761 tactgctccg ataccatccc acaaattatc aagcgcatac attcctcttc ttaaattaaa
     5821 tgttggttga tagagtggtt gaacaaaaga ccgtccaagt tcaattgtaa atggaaaata
     5881 atctttaata aatgttcttg aatatttgaa taaacttgcg gttggtgatt taatagatcc
     5941 atccttatcg atttcaagat gctcacaata aataaaacga tagcctccaa ttaattcctt
     6001 atcattgggg tcccataaca caagttgttt aaatgcatat tcccctttgt cgaatgagtc
     6061 aagatcaagt tcttctccag ttccgccacc tgcatcccga aaagtaactt cacgaagtct
     6121 tccaatttca cgaactacgt ttggtgaatc catttcacta acaagataaa tctcattatt
     6181 accattatta gtttttttta gaaatcgatc gggatttagt tctttctcta atagtcgttt
     6241 atcaacagga ggaattatag ttttcatttc gacatttatt aatccataat acaaatataa
     6301 tacttgacat tattaaactg caatttcgtt gttcgttcta agattaagtg gcgaaaacca
     6361 cattatacaa tcaaacaatg cactagactc ctagctcttt accaattaat tcgttataac
     6421 cagtatccaa actatatgaa tactgcctca atatttcagc ccattcagct tttgtatgcc
     6481 tattatcaaa ggtactatag gatatgggtg atccaaaagt aatttttaaa gtgctgtttc
     6541 tctgtttaat aaactcatta acaaggaaaa gcatttctat gtttgcctta attccaatag
     6601 ctttacggat atttgaaaga ttataaaaga agttagaatt acgaccacca atatgtgtag
     6661 gaataatatc acgtttatat ttttttgctt ttgatataaa agtgtttttc cattcaatat
     6721 ccataatttt tcctttcctt ttcctcgaaa caagaccaaa tgggaaataa catattattt
     6781 tgtcggaggc aaaagtatca tttaaaattt tgatattttg agcattacta ccatgtttgt
     6841 tgatcggaat aaataatggt cttaaatttt cgatattcat taatatatcg ttcacaggaa
     6901 acacaagatc ttttcttact ttgccaactg caagcattag tgctagtcca tcaattccac
     6961 ccagaggatg gtttgaagca attatatatc taccatcctt cggaatattg ttgaggcctg
     7021 aaatatcaag tttcgtattc aaatcagtta atagtgcctc aataaattca atccctgaaa
     7081 tatgtccatg gttttgcaag aataaattga gagtatcttg atgaataagt cgctttagat
     7141 aactaaccat aaaaccaggg agaaatcttt tcagaagtgg gcttttatca gaaagtactt
     7201 tttcgatatc aaccctttca ggattg
//
LOCUS       DASCQP010000429         2612 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001579337, whole genome shotgun sequence.
ACCESSION   DASCQP010000429 DASCQP010000000
VERSION     DASCQP010000429.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2612)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2612)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2612
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001579337"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            14..508
                     /gene="atpF"
                     /locus_tag="QF480_07385"
     CDS             14..508
                     /gene="atpF"
                     /locus_tag="QF480_07385"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000276 - mitochondrial
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_component: GO:0045264 - plasma membrane
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HJN06423.1"
                     /translation="MSVINPGFGLVIWMTIAFGILLWVLAKFAWPAIMTSLKEREKSI
                     EDALLSAEKAREAMEELKLGNEELINEAKDERDSILKEARALKEKMIHDAKEKAQTTA
                     DSIVENAKDRIESEKEAALVEIKNTIATYSIDIAEKILREELKDKERQTAYAEKLLKE
                     TNLN"
     gene            520..1077
                     /gene="atpH"
                     /locus_tag="QF480_07390"
     CDS             520..1077
                     /gene="atpH"
                     /locus_tag="QF480_07390"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF012439.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F1 subunit delta"
                     /protein_id="HJN06424.1"
                     /translation="MRVKLLSKRYAQALFNLAVELNVLEKVVSDLKLIGKVFSENREL
                     RIIIANPVIDAYKKSSILNQLFKDNVQELTIKFLQLITAKGREKYIPYISEAFNEIYL
                     EFKNILSVDLTTAQKAQKVVTDDISNKLHKATNMNIELTEKVDGDIIGGFVVNFQDYK
                     YDASIINQLNKLKKDFSENLYETQF"
     gene            1100..>2612
                     /gene="atpA"
                     /locus_tag="QF480_07395"
     CDS             1100..>2612
                     /gene="atpA"
                     /locus_tag="QF480_07395"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013445947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HJN06425.1"
                     /translation="MADIKPAEVSAILRKELAGFESEAVLEEVGSVLQIGDGIARVYG
                     LTNVGAGELVEFEKTGLMGIVLNLEEDNVGIVLLGEPGDINEGDSVKRTKRIASLKVG
                     EGMLGRVVNTLGEPIDGKGPIQGETYEMPLERKAPGVIFRQPVNEPLQTGIKAIDAMI
                     PIGRGQRELIIGDRQTGKTAIAIDTIINQKEFFEKGEPVYCIYVASGQKGSTIANIQQ
                     TLEENGAMAYTTIVMATASDPAAMQFYAPFAGAAIGEFFRDTGRPALVVYDDLSKQAV
                     AYREVSLLLRRPPGREAYPGDVFYLHSRLLERAAKVIDADDIAKKMNDIPDSIKDMVV
                     GGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESNLFNSGIRPAINVGISVSRV
                     GGNAQIKSMKKVAGTLKLDQAQFRELEAFAKFGSDLDAATMSVLEKGRRNVEILKQPQ
                     YSPLTVGQQVAIIFCGSQNLLSKVPVNRIIDFQDAFLLYMETQHKEILKQLGEG"
BASE COUNT          901 a          408 c          561 g          742 t
ORIGIN      
        1 aaaaatatag attatgtcag taattaatcc cggttttggt cttgtaattt ggatgacaat
       61 tgcctttggt attttgttgt gggtactagc aaaatttgca tggccagcaa ttatgacttc
      121 attaaaggaa agagaaaaat ctattgagga tgctttgtta tctgctgaaa aagcaagaga
      181 agcaatggag gaattaaagc ttggcaacga agaacttatt aatgaagcta aagatgaacg
      241 agatagtata cttaaagagg caagggcatt aaaggaaaaa atgattcatg atgccaaaga
      301 aaaggcacag actactgctg atagtattgt tgaaaatgca aaagacagaa ttgaaagtga
      361 aaaagaggct gctttagttg aaattaaaaa tactattgcc acatattcta tcgatattgc
      421 tgaaaaaatt cttcgagaag aacttaaaga taaggagaga caaactgcat atgcagaaaa
      481 acttcttaaa gaaaccaact taaattaaga ggtgccaata tgagagtaaa attattatca
      541 aaacgctatg cacaagcatt attcaatctg gcagttgaac tgaatgtgct tgagaaagta
      601 gtttctgatc ttaaacttat tggtaaagtg ttttccgaaa accgtgaatt gaggataata
      661 attgctaatc ctgttattga tgcttacaag aaaagtagta tcttgaatca actattcaaa
      721 gataatgttc aagagcttac gataaaattt ctgcaattaa tcactgcgaa agggagagaa
      781 aaatacatcc catatattag tgaagcattt aacgagattt atttggaatt taaaaacata
      841 ctatccgttg accttacaac agcacaaaaa gcacaaaaag tggttactga tgatattagc
      901 aataagctac ataaagcaac taacatgaat attgaattaa ctgaaaaagt tgatggagat
      961 attataggag gtttcgttgt taactttcag gattacaagt atgacgcaag tataattaat
     1021 caattgaata agttgaaaaa ggatttttcg gagaacttgt atgaaacgca gttttaaaaa
     1081 aaagtaaaaa gtatatcata tggcagacat taaaccggct gaagtatcag ccattctacg
     1141 taaagaactt gcaggctttg aatcggaagc ggtattagaa gaagtaggat cggtattaca
     1201 aattggtgat ggtattgccc gagtttatgg actaacaaac gttggagcag gagaacttgt
     1261 ggaatttgaa aaaacagggt taatgggaat agttcttaac cttgaggagg ataacgttgg
     1321 tattgtattg ctcggtgaac cgggtgatat aaacgaaggt gacagcgtaa agcgcacaaa
     1381 acgtattgcc tcccttaaag ttggtgaagg catgcttggc agggttgtta atacattagg
     1441 agagcctatt gacggcaaag gaccaataca aggagaaact tatgaaatgc ctctagagag
     1501 aaaagcacca ggtgttattt ttcggcaacc tgtaaacgaa cctcttcaaa ctggtattaa
     1561 agccattgat gctatgatac ctattggtcg tggacagcgt gagcttatta ttggcgaccg
     1621 tcagaccggt aaaacagcta tcgccattga tacaataatc aatcaaaagg aattttttga
     1681 aaaaggcgaa cccgtttact gcatttatgt tgcatcgggt caaaagggat cgactattgc
     1741 aaacattcag caaactctgg aagaaaatgg agccatggct tatacaacta ttgtgatggc
     1801 cactgcatct gatcctgctg ctatgcagtt ttatgcacca tttgccggtg ctgcaattgg
     1861 tgaatttttc cgtgatactg gccgtcctgc attagtagtt tatgatgatc ttagtaaaca
     1921 agcagttgct tatcgcgagg taagtttgct attgcgtcgt ccaccaggac gtgaggcata
     1981 tcccggtgat gttttttatc tgcattcaag actcctcgaa agagctgcta aagttattga
     2041 cgcagatgat attgcaaaaa aaatgaacga tattcctgat agtattaaag atatggtagt
     2101 gggaggtggc tcattaacag cactgccaat aatcgaaaca caggcaggtg acgtaagtgc
     2161 ttatattcct acaaatgtta tttctattac tgatggacag atattccttg aaagtaatct
     2221 gtttaattct ggtatccgac ctgctattaa tgtaggtatt tcagtttccc gagttggagg
     2281 taatgctcag atcaaatcta tgaaaaaagt ggcgggaact cttaaactcg accaggcaca
     2341 attccgcgaa ctggaagctt ttgcaaagtt tggttctgat cttgacgctg ctactatgtc
     2401 tgttcttgaa aaaggaagaa ggaatgttga aatacttaag caaccacaat attcaccact
     2461 aacagttgga cagcaagttg ctattatttt ttgcggctcg caaaatcttc tttcgaaggt
     2521 accggtaaac agaattattg actttcaaga tgcatttctt ttgtacatgg agacacaaca
     2581 taaagagata cttaaacagc tgggcgaagg ta
//
LOCUS       DASCQP010000430         2607 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001582765, whole genome shotgun sequence.
ACCESSION   DASCQP010000430 DASCQP010000000
VERSION     DASCQP010000430.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2607)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2607)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2607
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001582765"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            19..>2607
                     /locus_tag="QF480_07400"
     CDS             19..>2607
                     /locus_tag="QF480_07400"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HJN06426.1"
                     /translation="MPVHMDSLFSEIRIFFLLFIISISFSISIFGSPAIITENSDSLE
                     VFTLCDSAMNNRSRLEVGLTYVRSGNQIANKSDCESCIAETMYTLGVIFYENALYDSS
                     LYYFDKVLTNFSKLNSEERNIETIDYISNAYIGNYKYKESIKYARLGLKYADSVGRNA
                     SKATFYLSMGNSYAELGLYKKSTDAIMSSIKIFEAEKDSTGISNSLISLGSIYTNNKN
                     FTDAYEYTSRALNICIRLNDKRGISVCLNNIGIIYSFTSEHEEALEYYQRSMEIDKEL
                     GDNEGVAIGLNNIGDSYRYLGDTVLAISYYEKCLKIGRPNNYSVVAVALSNLGEVYLA
                     QRNFKLALSNVLESLELAELTGSTEQILLTFDILRSIYAAIGNYEDAYNYLVNYKLLY
                     DTVFAITKSKYIKEIKARYDDEKQKIEISSLKDKSISESLYKDRLTWIIIIISLLIIV
                     MLIINILTRRSKKLVRNQILYYEKLLERSEDFVFVVDEKANIKYISPSYEKKIGRKIE
                     SRIGKSIFEFLHPDDIDFIKREFKGIIVDKQSRSIDIRMKNGFDEWIYVHAYGQNLFD
                     DVLINGIVVNFWDITQRKKNEELINKSELKFRQIFDAFPDIYFQADLNGVITEISPSI
                     TKISGYTRDEILSLPSKDYNNFVSDWETISAKFETEISVHDYDTKVTTKDGNVINCSL
                     SAELIFSDNNSIPVAIQGVIRDISSRIKNQQSIRKSELKLKEANKSKEKLFSIIAHDL
                     IGPIGTNKSIVDLIVGQVDELSHEEIISLITSLKPTLDSTYLLIENLLSWARIQQDRL
                     KPSKEDILLNKIVEEVVELLSDQAQRKSIKLVISGDKAIKVVADKNQLEIVLRNLISN
                     AIKFSNL"
BASE COUNT          937 a          342 c          488 g          840 t
ORIGIN      
        1 atgctaataa tagattatat gccagtgcat atggactccc tatttagtga aattagaata
       61 ttttttttgt tatttattat atccattagt tttagcatta gcatttttgg tagtccagct
      121 attataaccg aaaatagtga ttcacttgaa gtcttcactc tttgtgattc tgctatgaac
      181 aacaggtcta gattggaagt aggtttgact tatgttcgaa gcggaaatca aatcgccaat
      241 aaaagcgatt gtgaaagttg tatcgctgaa actatgtata cacttggtgt tattttttac
      301 gagaatgcac tgtacgacag ttcattgtat tattttgaca aagtcctgac caatttttca
      361 aaattaaata gtgaagagcg aaatattgag acaattgatt acattagtaa tgcttacatc
      421 ggtaattata aatataaaga atcaatcaaa tatgcacgat taggattaaa gtatgctgat
      481 tctgttggac gaaatgcctc aaaggctacg ttttatttaa gtatgggcaa cagctatgca
      541 gagttgggct tatacaagaa atcgacagat gccataatga gttctattaa aatatttgaa
      601 gcagaaaaag atagtactgg cattagtaat agtttaatta gtttaggatc aatttacaca
      661 aataacaaaa attttacaga tgcgtatgaa tatacctccc gagctcttaa tatttgtata
      721 aggctaaatg ataagagggg aatatcggta tgtttgaata atattggtat tatatacagc
      781 tttacatctg aacatgaaga agctctcgag tattatcaga gatcaatgga aattgataag
      841 gaattaggag ataatgaggg tgttgctatt gggttaaata atattggtga tagctacagg
      901 tatctaggtg ataccgtatt ggctataagt tattacgaaa aatgtcttaa gataggaagg
      961 ccaaataact actcggttgt tgctgttgcc ttgtccaacc ttggcgaagt atatttagcg
     1021 caaaggaact ttaaattagc acttagcaat gttcttgaaa gcctcgaatt agctgaatta
     1081 acaggatcaa cggaacaaat acttcttact tttgatatct tacgtagtat atacgcagca
     1141 attggtaatt atgaagatgc ctataattac cttgttaatt ataaacttct ttacgatacc
     1201 gtttttgcaa ttactaaaag taaatatatt aaagagataa aggccagata tgatgatgaa
     1261 aaacagaaaa ttgaaattag tagcctaaaa gacaaaagta ttagcgaatc attatataaa
     1321 gatagactta cttggataat cattattata tccttactta taattgtgat gctaattatt
     1381 aatattttaa cgcgtcgttc aaaaaagctt gtaaggaatc aaatactata ttatgaaaag
     1441 ctgcttgaga gatctgaaga ttttgtattt gtcgtagatg agaaagcaaa tattaaatac
     1501 ataagccctt catacgagaa gaaaattggg aggaaaatcg aaagccgaat tggaaaaagt
     1561 atttttgagt ttcttcatcc cgacgacatt gattttatta aacgggaatt caaaggtatc
     1621 atagttgaca aacaatctcg tagcatcgac attagaatga aaaatggttt tgacgaatgg
     1681 atttatgtac atgcatatgg ccaaaacttg tttgatgatg tgttgattaa cggaatagta
     1741 gttaattttt gggatataac acaaaggaag aaaaatgagg aacttattaa taaaagtgaa
     1801 ttaaagttcc gccagatatt tgatgcattt cctgatattt attttcaagc tgacttgaat
     1861 ggggtgatta ctgaaattag cccttcgatt acgaaaataa gcggttatac tcgtgatgag
     1921 atactaagct taccctcaaa agattataat aactttgtaa gtgattggga aactattagt
     1981 gctaaatttg aaacagagat atctgtacat gattatgata ctaaggttac tacaaaagat
     2041 ggaaatgtta ttaattgctc tttatcggct gaactgattt tttctgacaa taatagtata
     2101 ccagttgcga ttcaaggtgt tatccgtgat atcagcagca gaataaaaaa tcaacaaagc
     2161 attcgtaaat ctgaacttaa acttaaggaa gctaataagt ctaaagaaaa actcttttca
     2221 attattgctc acgatcttat aggaccaatt ggcactaaca agtcaattgt tgatttgata
     2281 gtagggcagg ttgatgaatt atcgcatgaa gagatcatct cgttaattac ttcgttaaaa
     2341 cctacattgg attctactta tttgttaata gaaaacttgc tgtcgtgggc aaggattcag
     2401 caggatagat taaagccaag taaagaggac attctattaa ataaaattgt tgaggaagta
     2461 gttgagttat tgagcgacca agctcaaaga aaatctatca aattagttat ttcaggagat
     2521 aaagcaatta aagtagttgc tgataaaaat caactggaaa ttgtgctgag aaatctgata
     2581 tcgaacgcga ttaaattttc aaattta
//
LOCUS       DASCQP010000431         2497 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001588139, whole genome shotgun sequence.
ACCESSION   DASCQP010000431 DASCQP010000000
VERSION     DASCQP010000431.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2497)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2497)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2497
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001588139"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            34..737
                     /locus_tag="QF480_07405"
                     /pseudo
     CDS             34..737
                     /locus_tag="QF480_07405"
                     /inference="COORDINATES: protein motif:HMM:TIGR04456.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LruC domain-containing protein"
     gene            882..>2497
                     /locus_tag="QF480_07410"
     CDS             882..>2497
                     /locus_tag="QF480_07410"
                     /inference="COORDINATES: protein motif:HMM:TIGR04456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LruC domain-containing protein"
                     /protein_id="HJN06427.1"
                     /translation="MKITTNLSSKITFLILLFVIIFNYGCRDNVDNNINPSGITNFGD
                     LKINSNFKFSTTKELGVHLEIMSNNPEEPTHKFGIYLGNPDQGGKLIISGITDPYHTF
                     QTTIKIPSFVNELYITNQDVFNNIETVVVDAAGGSIYYTFNTEVYTVNEFKTTNVLYT
                     DPGCGTCDEIISPGTYSTKNIDDNTTYCIEAGGTVNITNKVDFKGGTLIVCGTLDLKK
                     VKANNNGGDFVISAGGVLDLENGNIDKDLTNFINFGTANIEEQTEIRDMNFENQGTLT
                     IDGGVNNRTINFYNDGTMTVDGNFTNNDEGFNTGTLNITGHFINNGSPGTEFTNDCKM
                     IITGNFNLSRIFNNTDNAYVEVGQNATLTGNSNTTILNMGVQSLISTTNLTVNTTING
                     PSVSCARIDIAQTTNINGSGIVTGQMDICDADGIENNNGTIGPDVTFDCSCFVATNSC
                     NPGAGTPPNPDTDGDGCPDDQDDYPTDPDRCSNDYYPNQTDFTNFACEDLWTSLGDYD
                     FNDLILETNYKIVKDAQNEIVEIYGKFHIAA"
BASE COUNT          895 a          397 c          433 g          772 t
ORIGIN      
        1 tttaatgatc tagtaatgga ttataaattt aaaatgttat caaataccca aaattacatt
       61 tttcaaataa ccggcacttt tattattaag gcttttggag caacatatga aaatggattt
      121 ggattccaac tatctgatga tttagatcaa agtgacataa atgtaagtgg ttataattta
      181 actgagaatt acattacact tggtgccaat ggacttgaat caggacaatc caagccaaca
      241 attattgtct atgataacac ttttaaccaa atggctcatc caggtacagg aataggcgta
      301 aataccacac cgggagctcc ttatgttgac cctgacacat tagttataac ctcaacttaa
      361 ctcctgacga gtatacaagt gacgatttag atatttcaaa tttcaatccg tttataattg
      421 ttaatcaggt tcgtggtgtt gaagtacatc ttcctaatta cccacctacc gatcttgtaa
      481 atacaaattt atttggaaca cttgcagatg atagtgatcc aagcctcggc cgttattaca
      541 aaactgataa taatttgcca tgggcgatta atatatacga aacatttgag tatccgattg
      601 agaaatctca ggttaacaac gcatatctta aatttattga ttgggcagaa agtggtggag
      661 ttgattttca gaactggtat caagatcaac caggttatag aaatgatgcg ttgatatata
      721 ctgctccttc aaaataaaat ttgtttagag agctacttat gattaaaaat tataaaccaa
      781 acttatttat tatttgttta ccaattgtat tgcttacaat ctaacaagta ggtaaatttg
      841 tatgattttg atcatcatta actcagataa aaaatacagt catgaaaata actactaact
      901 taagctctaa aataactttt ttaattctat tatttgtaat tatctttaat tatggatgca
      961 gggataatgt tgataataat attaatccat caggcataac aaattttgga gatttaaaaa
     1021 tcaactcgaa tttcaaattt tcaacaacta aggaactcgg tgttcatctt gaaataatga
     1081 gcaataaccc agaagaacca actcataaat tcggtattta tttagggaat cctgatcaag
     1141 gtgggaaatt aattatttca ggaattacag atccttacca tacctttcaa acaactataa
     1201 aaattccttc atttgtaaac gaactttata taacaaacca ggatgtattt aataatattg
     1261 aaacagttgt tgttgatgca gctggtggca gtatatatta taccttcaat accgaagttt
     1321 acacagtgaa tgagttcaag acgaccaacg ttttgtatac tgatccggga tgtggtacat
     1381 gtgatgaaat tatttcacca ggcacataca gcacaaaaaa tatagacgac aatacaacat
     1441 actgtattga ggctgggggt actgttaata ttaccaataa agttgatttt aaaggtggaa
     1501 ctcttattgt gtgtggtacg cttgatctca aaaaagttaa agcaaataat aatggaggtg
     1561 attttgtcat cagtgctggt ggcgtactgg atttggaaaa tggcaatatt gacaaagacc
     1621 tgaccaattt tataaatttc ggtactgcaa atattgaaga gcaaacagaa atcagagata
     1681 tgaattttga aaatcaggga acgttaacaa ttgatggagg cgttaataat agaaccatta
     1741 atttttataa tgacggaaca atgactgttg acggaaactt cactaacaat gatgaagggt
     1801 tcaataccgg aacacttaat attactggac actttataaa taatggatca ccaggtacag
     1861 agtttactaa tgattgtaaa atgatcataa ctggtaactt caacttaagt cgcatattca
     1921 acaataccga caatgcttat gtagaggttg gacagaacgc aacattaaca ggaaattcta
     1981 atactacgat attaaatatg ggtgtgcaaa gcttaatttc aactaccaac ctaacagtaa
     2041 atacaactat aaatggccca tctgtatcat gtgccagaat tgatattgca caaactacaa
     2101 atataaatgg tagcggtatt gtaaccggcc aaatggatat atgtgacgct gatggtattg
     2161 aaaacaacaa tggtacaatt ggtcctgatg ttacatttga ttgttcatgc tttgtagcaa
     2221 cgaacagctg taatcctggg gcaggtacac cgcctaatcc tgatactgat ggcgatggct
     2281 gccctgacga tcaggatgat taccctactg atcccgacag atgttcaaat gattactatc
     2341 caaaccaaac agattttaca aactttgcat gtgaagattt atggacatca ctaggtgatt
     2401 atgattttaa tgatctaata ttagaaacaa attacaaaat tgtaaaggat gcacaaaacg
     2461 aaatagttga gatttatgga aagtttcaca tagcagc
//
LOCUS       DASCQP010000432         8551 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001594221, whole genome shotgun sequence.
ACCESSION   DASCQP010000432 DASCQP010000000
VERSION     DASCQP010000432.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 8551)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8551)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8551
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001594221"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..542
                     /locus_tag="QF480_07415"
     CDS             <1..542
                     /locus_tag="QF480_07415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06428.1"
                     /translation="KDGKLPSDIQFKTYCIAAPKAGNTPFAYDYENLTKGGWAFSIQN
                     TADWIPYCPITFETAGDLPPISGFTKVREVLTEIHYPPGPNFNDAYAKYGKLQNEVLD
                     GMQQVIKEIIYPKISALFPEYVEPELIKSLDFERIGVTIPLIADKDYYKKFPDSKAHF
                     NVWENHSPYPYYYLAGKMK"
     gene            689..1633
                     /locus_tag="QF480_07420"
     CDS             689..1633
                     /locus_tag="QF480_07420"
                     /inference="COORDINATES: protein motif:HMM:NF009007.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamate kinase"
                     /protein_id="HJN06429.1"
                     /translation="MRNLAVIAYGGNALLKVGQKGTIDDQELNAYEASKNLIKLIKRG
                     YNLVLTHGNGPQVGNILLANTAGHKLYDLPDMPLDISVAYSQGFIAYILEQQLRNVLM
                     ENDLDSDVISIITQVLVNKDDPAFLKPNKPIGPYFTKEEAKKFMAESDSVFKQDKARG
                     GWRKVVASPEPLVIFNMRSIEKIASEGHIAIAVGGGGIPCYYKQENKLQGIDAVIDKY
                     LASSLLASQIHAHRLFILTDVPKVCLNFNTPQEKTIDRMSIAEAKQYLIEGQFGAGSM
                     GPKIQAAINFIVRSGKDAIITAPELLGVDNGGTRLTIV"
     gene            complement(1670..2266)
                     /locus_tag="QF480_07425"
     CDS             complement(1670..2266)
                     /locus_tag="QF480_07425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06430.1"
                     /translation="MWVLPFLNVYGIFGYTKGAISPDLVVPYIVIENIPVIDSIIIDT
                     TFEIHDKIEYLGPTYGFGATFSMGFNYLFFMADYNYSVTNPEDIDENLHNHFFSPKIG
                     IFLGNKKSRTFGAFWIGAMYISNDQSFSGKMKVEDITPELVYLFGEEANYSGKIIANN
                     RWNFVVGASLVIKNHHHIILEGGFIERKQISLGYDFRF"
     gene            complement(2275..2550)
                     /locus_tag="QF480_07430"
     CDS             complement(2275..2550)
                     /locus_tag="QF480_07430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06431.1"
                     /translation="MKNKQLISFSGIENANKINVSPIVDILPVFGKKARKKGNDLSLP
                     FGIGIYSIYYDQEYMASNLRRRLTPHQLQQEPILFIKTLQLTNGEFS"
     gene            complement(2668..3621)
                     /locus_tag="QF480_07435"
     CDS             complement(2668..3621)
                     /locus_tag="QF480_07435"
                     /inference="COORDINATES: protein motif:HMM:TIGR00367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0098662 - inorganic cation transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="calcium/sodium antiporter"
                     /protein_id="HJN06432.1"
                     /translation="MIVYILFVLGFVILIFGAKFLVDGASSIGVKVGLSQLIIGLTIV
                     AFGTSLPELVINVFASLKGSSGLAIGNVLGSNIMNTLLIIGITAIIYPIKVDSLICKR
                     DSWINLIAILLVAILANDLFFGKQEKIIDRVDGIILLIFFIIMLYVLFSNIGKRNNSD
                     ENKIISYTYSKSIILIILGSLGLFFGGKWIVSGALAISYELGVSESTIGLTLVAAATS
                     LPELVTSIVAALKKNTDIAIGNALGSNIFNIFLVLGTSATIHPINFESSLNIEIGILI
                     VASLFLMLVIRTGNKARTITRLEGVFLTLGYFIFLFWSIFS"
     gene            complement(3630..4298)
                     /locus_tag="QF480_07440"
     CDS             complement(3630..4298)
                     /locus_tag="QF480_07440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016277840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HJN06433.1"
                     /translation="MGIKQNLIDFLSTIPNTVLLVAVSKTKPIEDIQLAYDAGQRVFG
                     ENKVQDLIAKAPQLTNKIDWHFIGHMQTNKVKFIAPFVKMIHAVESLKLLKEINKQAK
                     KNDRIIDCMLQFHIAKESTKFGLNIKEAEDILTNSELVNFKNVRLVGVMGMATYTDDT
                     NQIRTEFRQLAEYMDVLKKKHFEKEAYFKEISMGMSGDYKIAIEEGSTMIRIGTTIFG
                     ERNY"
     gene            complement(4366..4926)
                     /locus_tag="QF480_07445"
     CDS             complement(4366..4926)
                     /locus_tag="QF480_07445"
                     /inference="COORDINATES: protein motif:HMM:TIGR01926.1"
                     /note="This protein belongs to a clade of uncharacterized
                     proteins related to peroxidases such as the
                     alkylhydroperoxidase AhpD; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxidase-related enzyme"
                     /protein_id="HJN06434.1"
                     /translation="MARIKVIKYDEATGRLKDIYDQLIKSRGKLADVHSIQSLRPESI
                     VKHIDLYMEIMFSKSELSRADREMMAVIVSAANNCEYCQVHHAEALNNYWKDDQKVAT
                     LRQDFRQVELTERELMLCEFAESLTINPGLSNEIDQTKLLREVGLSDNGILDATLVVA
                     YFNFVNRIVLSLKVEIESDSGTGYKY"
     gene            complement(4945..5862)
                     /locus_tag="QF480_07450"
     CDS             complement(4945..5862)
                     /locus_tag="QF480_07450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HJN06435.1"
                     /translation="MKRFSLIIFTVIFLIGCSNPTTLKDEKTKNTEIVLAKENNKVIG
                     LGGIFFKCKDPQMVKEWFDQNIGLITNEYGSMFEFRLINNPEEIGYLQWSPFSEKTNY
                     FQPSEKELMINYRVKNLKKLMNELKENNVTILDSIESYEYGKFLHIMDPENNKIELWE
                     PIDSVFTNLYEGKTTIKVGIGGIFFKSKNPKKLIEWYHNNLGFVTDRYGSVFKSRNAV
                     NPDEINRLQWSPFSDSTEYFSPSEKQFMINYRVENLEELVSKLRSKGITILDSIEDTP
                     YGKFVYAMAPENIKIELWEPILKAQMDVD"
     gene            complement(5930..7648)
                     /locus_tag="QF480_07455"
     CDS             complement(5930..7648)
                     /locus_tag="QF480_07455"
                     /EC_number="1.14.16.-"
                     /inference="COORDINATES: protein motif:HMM:NF010657.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_process: GO:0009072 - aromatic amino acid metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid hydroxylase"
                     /protein_id="HJN06436.1"
                     /translation="MSVNVIIDRLPKHLVPFIIDQDYSRYTAQDQAVWRAVMKQNILF
                     LKNIAHSSYLDGLKKTGISLDSIPSIEEMNRSLEKIGWAAVTVDGFIPPSAFMEFQKH
                     KILVIAADIRSANHIEYTPAPDIIHEAAGHAPIIADPEYAEYLRYFGEIGSKAFSSKS
                     DYSIYEEIRLLSILKADPTSKNSAIKKAEQLLTKKIENAEIPSEMSLIRNLHWWTVEY
                     GLIGNIKDPKIYGAGLLSSIGESKGALKNSVSKIPYSIDAKDYSFDITAPQPQLFVTP
                     DFKHLTNVLDEFANQMALRTGGLDGVLKAIESDAPATLVYSSGLQISGTFTNVIIHKS
                     SPIYINTAGPTTLNYDDKILDGEGPEKHNHGFGSPIGKIKGTLVPTRFLSDDALSNLG
                     IQNGILSSFEFESGIKVKGELQSVVRRNGKLILMSFINCTVKHKNKILFDPNWGQYDM
                     AVGENIVSAFSGPADSDAFGTTYDPPREKTHQIVYDDLTLNLHKLYEKVREIREKRKN
                     LNDLPHIWNQLIKNYPDEWLLPIEIYELSKSDNNLTGLSKDAKNFLKNKLSIPGSSSI
                     ISNILQ"
     gene            7741..>8551
                     /locus_tag="QF480_07460"
     CDS             7741..>8551
                     /locus_tag="QF480_07460"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HJN06437.1"
                     /translation="MSKIPRIYVALPILNESENINALINCLRLQSFSNFKVVVCVNQY
                     DSWWQESDKIAICEDNIKSIELLKLENDLDIHIIDRSTNGTGWTSKKGGVGWARKTIM
                     DYIVTISDKENIIVSIDADTYYPPDYLQSIFNYFYENKKAGGVAIPYYHKLNNDDTDR
                     LILRYEIYMRYYLVNMIRINNPYSFTALGSAMAFPVWAYLKVGGLTPVSAGEDFYFLQ
                     KLVKSTSIGLWCPSVAHPSPRFSDRVDFGTGPALIKGNSGDWESYPNYHHRF"
BASE COUNT         2775 a         1490 c         1368 g         2918 t
ORIGIN      
        1 agaaagatgg caaacttcca tccgatatac aattcaagac ttattgtatt gcagctccta
       61 aagctggaaa tacgcctttt gcatacgact atgaaaattt gacgaaaggt ggttgggcct
      121 tttcaattca aaatacagcc gattggattc cttattgtcc aataactttt gaaaccgcag
      181 gagatttacc acccatatcc ggctttacca aagttcggga agtgcttacc gagattcatt
      241 atcctcccgg accaaacttt aatgatgcat atgctaaata tggtaaattg caaaatgaag
      301 ttcttgatgg catgcagcaa gtcataaaag aaattatcta tccaaaaata tcggcactct
      361 ttcctgaata tgttgagcct gaactgatta aatccttgga ttttgaaaga ataggtgtaa
      421 ctatccctct cattgctgat aaggattatt ataaaaagtt tccagatagt aaagctcatt
      481 tcaatgtttg ggaaaatcat tctccttatc catattatta tttggcaggc aaaatgaaat
      541 gaaatagttg attcagacct agttaagcgt ctattataaa ttgcattttc ttacttttat
      601 tactttgaaa gttataactg actgacgacc caatgaattg cgaaaaaaat tatacctttg
      661 tgctcttttt tttaaatatt tgttgattat gaggaactta gctgttattg cgtatggagg
      721 aaatgcttta ttaaaggtag gtcaaaaagg aaccattgat gatcaggaat taaatgcata
      781 tgaagcaagt aagaatctga ttaaacttat taaaaggggt tacaatcttg tcctaactca
      841 tggtaacgga cctcaggttg gaaatatact tcttgctaat actgcaggtc ataaacttta
      901 tgatcttcct gatatgccac ttgatataag tgttgcatat tcacaaggtt ttattgcata
      961 tatacttgag caacagctgc gcaatgtgtt aatggaaaat gatcttgatt ctgatgtgat
     1021 ttctattatc acgcaagttt tggttaataa ggatgatcct gcttttttaa aaccaaataa
     1081 acctattggc ccttatttta ccaaagaaga agctaaaaag tttatggctg aatctgattc
     1141 tgtttttaaa caagataaag caagaggtgg atggcgtaaa gttgttgcct ccccagaacc
     1201 gttggtcatt tttaatatgc gatccattga aaagattgct agtgaaggtc atatagcaat
     1261 cgccgtcggt ggaggtggta ttccatgtta ttacaaacaa gaaaacaagt tacagggtat
     1321 agatgcggta attgataaat acctggcgtc ctcactttta gcttctcaaa tacatgctca
     1381 ccgactattt atacttacag atgtacctaa agtttgcctt aactttaata ctcctcagga
     1441 aaaaactatc gacagaatga gtattgccga agccaaacag taccttatag aaggtcagtt
     1501 tggagcaggg agtatggggc caaaaataca ggccgcaatt aatttcatag taagaagtgg
     1561 taaagatgct ataattactg cacctgaact actaggtgtt gataatggtg gaacgaggtt
     1621 gacaattgtg taattaaaaa agtgggaggc ggaatactaa atcagaggct taaaatctaa
     1681 aatcataacc aagtgaaatt tgtttgcgtt caataaaacc accttccaaa ataatgtgat
     1741 ggtgattttt aataactaat gatgctccaa ctacaaagtt ccaccggttg ttggcaatta
     1801 tttttcctga ataattagcc tcttcgccaa atagataaac aagctcgggt gtaatatctt
     1861 caactttcat tttcccggaa aacgattgat cattactgat gtacattgca ccaatccaaa
     1921 acgcgccaaa tgttctactt tttttattgc caagaaaaat tccaattttt ggactgaaaa
     1981 aatgattatg aagattctca tcgatatcct ctggattcgt taccgagtaa ttatagtccg
     2041 ccatgaaaaa caaataatta aatcccatag aaaatgttgc tccaaatcca tatgttggtc
     2101 ctaaatattc aatcttgtca tgtatctcaa aagttgtatc aataattatt gagtcgatta
     2161 ctggaatatt ttcgataact atatatggaa ctacaagatc aggcgaaatg gcacctttag
     2221 tgtatccaaa tattccataa acatttaaga aaggtaatac ccacaagttt ggccttaact
     2281 gaactctcca ttcgtaagct gaagtgtttt gataaacagt atcggctctt gctgtaattg
     2341 atgtggagtc agacgtcgcc ttaaattgct ggccatatac tcttgatcgt agtatattga
     2401 gtagattcct attccaaaag gtagagataa atcatttccc ttttttcttg ccttttttcc
     2461 aaaaacaggt agtatatcaa caatagggct aacgtttatc ttattagcat tttcgattcc
     2521 ggagaatgaa ataagctgtt tgtttttcat atatccgaat ccctgttgtt gagcattaag
     2581 gggtaaatta aaaaaagata aaagaaatat aattaatagg aagtgaatat tcttcattaa
     2641 ggagttctaa atgtaaggga gacaaaacta agaaaatatc gaccagaata aaaaaatgaa
     2701 atatcctaaa gtaagaaaaa caccttctag tcttgtaatt gttctggcct tattaccagt
     2761 tcttataaca agcatcaaga ataatgaagc cacaattaat atccctattt caatatttaa
     2821 actgctttca aaatttatag gatgtatagt agcacttgtt ccaagaacga ggaaaatatt
     2881 aaaaatatta gaacccagtg cattaccaat agctatgtca gtattcttct tcaaagcagc
     2941 aactattgag gtaacaagtt caggaagaga tgtagcggca gcaactaatg tgagtccaat
     3001 tgtagattca gaaacaccta attcgtagga aatagctaaa gcacctgaaa cgatccattt
     3061 cccaccaaaa aacaaaccca aactccctaa tattattaat ataattgatt ttgaataagt
     3121 ataggatatt attttgtttt catctgaatt gttccgtttc ccaatatttg aaaaaaggac
     3181 ataaagcatt attatgaaaa atatcaatag tattattcca tcaactctat cgattatttt
     3241 ttcctgtttt ccaaagaata aatcattagc tagaatggca accagtaata ttgcaattag
     3301 gttaatccac gaatctcttt tgcaaattaa actatctact ttaatcggat atataatagc
     3361 tgtaattcca attattaaca aggtattcat aatgttactt ccaagaacat tgccaattgc
     3421 aagaccggaa ctgcccttta aacttgcaaa tacatttatt acaagttcag gaagagaagt
     3481 gccgaaagca acaattgtta aacctatgat tagttgagaa agtcctactt ttacacctat
     3541 ggatgatgca ccatcgacta aaaacttggc accgaaaata agaataacaa aacctaatac
     3601 aaataatata taaacaatca ttttgctgac taataattac gttcaccaaa aattgttgtg
     3661 cctattctaa tcattgtgct gccttcctca atagcaattt tataatcacc tgacatcccc
     3721 atcgaaattt ctttaaaata tgcttctttt tcaaaatgct tctttttcaa tacatccata
     3781 tattcggcaa gttgtctaaa ttcggttcta atctgatttg tgtcatctgt ataagttgcc
     3841 atccccataa ctcctactag tcttacattc ttgaagttga ctagttcact attagttaga
     3901 atatcctcag cttcttttat gtttagacca aactttgttg attctttggc gatatgaaat
     3961 tgtaacatgc aatcaataat cctgtcattc tttttcgctt gtttatttat ctctttaaga
     4021 agttttaagc tttcaacagc atgaatcatt tttacaaatg gcgcaataaa tttcacctta
     4081 tttgtttgca tatggcctat aaaatgccaa tcaattttgt tagttagttg cggagcttta
     4141 gctattagat cctgaacttt gttttcgcca aaaacacgtt gtccggcatc ataagccagc
     4201 tgaatatctt ctataggttt ggtttttgaa acagctacaa gaagtactgt attaggaatg
     4261 gttgataaaa agtctattag gttttgcttg attcccatat tatttttttt acaaaggtct
     4321 caaaatttag gttgatcttc taagttttca aaatgagcat gtaacttaat atttataacc
     4381 cgttcctgag tcactttcaa tttcaacctt caaggataat acaatccggt taacaaaatt
     4441 aaaatatgct actacaagtg ttgcatcaag tataccatta tcgcttaacc ctacttctcg
     4501 taagagttta gtttgatcta tttcatttga taaaccagga tttatagtta atgattcagc
     4561 aaactcacac agcattaatt ctctttcagt taattctact tgtcgaaaat cttgtcttaa
     4621 tgtagctact ttctgatcat ctttccaata attatttaag gcttcagcat ggtgaacttg
     4681 gcaatattca caattattag ctgctgaaac aattacagcc atcatttcac gatctgcacg
     4741 tgacagttct gatttactga acattatttc catgtaaaga tcaatatgct taactatact
     4801 ttctggtcgt aaactttgaa tagaatgtac atctgcaagt tttcctctac ttttaatcaa
     4861 ttgatcataa atatctttaa gcctaccagt tgcttcgtca tattttatta cttttattct
     4921 agccatacaa aaaattggtg ttttttaatc gacatccatt tgagctttaa gtatcggttc
     4981 ccatagttca attttgatat tctcgggagc catagcatag acaaattttc cataaggagt
     5041 atcttcaatc gaatcaagaa tagttattcc ttttgacctg agttttgaca ctaactcttc
     5101 taaattttca actctatagt ttatcataaa ttgcttttcc gatggagaaa aatattcagt
     5161 tgagtcagaa aaaggtgacc attgaagccg atttatttca tcaggattaa ctgcatttcg
     5221 agacttaaaa acagaaccat atctgtcagt aacaaatcct aaattgttgt gataccattc
     5281 aatcaatttt ttcggattct tagatttgaa aaatatacct ccaattccaa cctttatggt
     5341 cgttttacct tcatataaat ttgtaaaaac actgtcaatt ggttcccaaa gttcaatttt
     5401 gttattttca ggatccataa tatggagaaa tttaccatac tcataacttt caattgagtc
     5461 aagaatagtt acattgtttt cctttaattc attcatcaat ttcttaagat tcttaactcg
     5521 gtagttaatc ataagttctt tctctgaagg ttgaaaataa tttgtctttt cagaaaacgg
     5581 actccattgt aaatagccta tctcctctgg attgttgatt agcctaaact cgaacataga
     5641 accatattca tttgtaataa ggcctatatt ttgatcgaac cattctttta ccatctgtgg
     5701 atctttacat ttgaaaaaga ttccacctaa tccaataacc ttattgtttt ctttcgccaa
     5761 aactatttca gtattttttg ttttttcatc tttgagagta gttggattac tacagcctat
     5821 aagaaatata accgtaaata taattaaact gaaccgtttc ataatttatt tctttactaa
     5881 atacaattat taaattttgc aagggttatt attgttgtct tatactttct tattgcaata
     5941 tattgctaat aattgaggat gaaccaggaa ttgataactt atttttcaag aagtttttag
     6001 cgtctttcga taagccggtt agattattat ctgatttact taactcatag atttcaatag
     6061 gtaataacca ttcatcggga tagttcttta tcaattgatt ccatatatgt ggaagatcat
     6121 ttaagttttt tcttttctcc ctgatttctc taaccttctc ataaagttta tgaagattaa
     6181 gtgtaagatc gtcatataca atttgatgag ttttttctct tggtgggtca tatgtagtac
     6241 caaatgcatc gctgtcggca ggaccactaa atgcacttac aatattttca cccacagcca
     6301 tatcatattg tccccaatta ggatcaaata gtattttatt tttatgctta acagtacaat
     6361 taataaatga cataagtatc agcttaccat ttctccgaac aacactttga agctcgcctt
     6421 taaccttaat ccctgactca aactcaaaag aagataaaat accgttttga attccaagat
     6481 tactgagtgc atcatctgat aaaaaacgtg ttggaaccaa tgtgcctttt atttttccaa
     6541 taggtgaacc aaagccatgg ttgtgcttct ctggcccttc tccatccaga attttgtcat
     6601 cataatttaa ggttgttgga cctgcagtgt taatgtaaat tggactactc ttatgtatga
     6661 tcacatttgt aaaagtacct gatatttgca atcctgaaga atataccaga gtagcaggag
     6721 catccgattc aattgcttta agtacgccgt caagtccacc cgttcgcaat gccatttggt
     6781 ttgcaaattc atcaaggaca tttgtgagat gcttaaaatc aggagtaaca aatagctgag
     6841 gctgaggtgc agttatgtca aaactgtaat cttttgcatc aattgagtaa ggtattttac
     6901 ttacactatt tttaagtgct cctttgcttt caccaattga tgaaagtaac cccgctccat
     6961 aaatcttagg atccttgata tttccaatca aaccgtattc aacagtccac caatgaaggt
     7021 ttctaataag agacatttct gaaggaattt cagcattttc tatttttttt gtaagaagct
     7081 gttctgcttt tttaattgca ctattttttg atgttggatc tgcttttaat attgaaagga
     7141 gcctgatttc ttcatatata ctatagtccg attttgatga aaatgcttta gatcctatct
     7201 caccgaaata tctgagatat tcagcatatt caggatcagc aataattgga gcatgacctg
     7261 cagcttcatg aattatatca ggtgcaggtg tgtattcaat gtgatttgca gacctaatat
     7321 cagcagcaat aacaagaatc ttatgttttt gaaattccat aaatgctgat ggtggaataa
     7381 atccgtcaac tgttaccgct gcccaaccta ttttctcaag tgaccgattc atttcttcaa
     7441 tacttggtat gctatcaaga gaaataccag ttttttttaa cccatcaagg tatgaactat
     7501 gagcaatatt cttaagaaac aggatgtttt gtttcattac agctctccat acggcctgat
     7561 cctgagctgt ataacggcta taatcttgat ctataataaa cggaaccaag tgtttaggta
     7621 atcgatctat gatgacattt actgacatgg cttatttaga aacgttttaa attagctcaa
     7681 aaatagaaat tatttattta gaaaataatt attttaacag attatatcat ttttgcccca
     7741 atgtctaaaa tacctcgtat atatgttgca cttcctatac tgaatgaatc agaaaatatt
     7801 aacgctttaa taaattgtct taggctgcag agtttcagca actttaaagt cgtagtttgt
     7861 gttaaccaat atgatagttg gtggcaagaa agtgacaaaa tagctatctg tgaagataat
     7921 attaagagta ttgaactgct aaaacttgag aatgatttag atattcacat tatcgatcga
     7981 agtaccaatg gtacaggatg gacctctaag aaaggagggg tagggtgggc ccgaaaaaca
     8041 atcatggatt atattgttac tatttcagat aaggagaata taattgtcag tatcgatgca
     8101 gatacatatt atcctcctga ttatcttcaa tcgattttta attatttcta tgaaaacaag
     8161 aaagcaggag gtgtggcgat cccatattac cacaaattaa ataatgatga taccgatagg
     8221 ttgattctgc gttatgaaat ttacatgcga tattacttgg taaacatgat caggataaat
     8281 aatccttaca gctttactgc actaggttct gcaatggcat tcccagtttg ggcataccta
     8341 aaagtaggag gcttaacacc tgtatcggct ggtgaggatt tttattttct gcaaaagtta
     8401 gtaaaatcaa caagtattgg attatggtgt ccatccgtag cccatccttc acctcgtttc
     8461 tctgatcgag ttgattttgg taccggccct gcacttataa aaggcaattc tggggactgg
     8521 gagtcttatc caaattatca tcatagattt t
//
LOCUS       DASCQP010000433         1726 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001597977, whole genome shotgun sequence.
ACCESSION   DASCQP010000433 DASCQP010000000
VERSION     DASCQP010000433.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1726)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1726)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1726
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001597977"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..616
                     /locus_tag="QF480_07465"
     CDS             <1..616
                     /locus_tag="QF480_07465"
                     /inference="COORDINATES: protein motif:HMM:NF014799.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HJN06438.1"
                     /translation="GLTLGEDGATHQILEDIGLMKMLPGMTVINTCDFNQTKQATLAI
                     AEYQGPVYLRFGRPKVPNFIPFDSEFTIGKGITLKEGTDISIIATGHLVWKALEAAEL
                     LNKSGINAEVINIHTIKPLDTELILNSVSKTRCVVTAEEHQINGGMGDSIAQLLSSKM
                     PVPIEFVAVMDVFGQSGKPDKLMKYYGLESLNIIEAAKKAISRK"
     gene            702..>1726
                     /locus_tag="QF480_07470"
     CDS             702..>1726
                     /locus_tag="QF480_07470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06439.1"
                     /translation="MLINSLAYSQVNKNNCDTVKIVAPAYLVLDDTSIKVYHDSTAII
                     CNRYIVITKKNGYSLYSKLVGESQKSNLIDKFFQMLIASSTQDTMLVKNDLIKAEDAY
                     NQYSGKIIRNIRIQVLKPIGPTISDTNLPVFTRMGNAINKSHFSTNKNVLERKLLFHV
                     NDTVNPLEMVENTRELAVLPYLQDATIILTNAKGDSVDVLVLAKDKFPWMPGLDIYDI
                     NRMTMHLKNVNIFGLGQSLDAGITIDTKSKPAFYLSDINYYIDNMYKQIDGGINFHVS
                     ENEKAYQLLLNRELIPLSIRLAGGLNIAQIEENIVIDPTDVDRSAWFFKYRYFELWSS
                     YLFYDDL"
BASE COUNT          614 a          282 c          307 g          523 t
ORIGIN      
        1 cggacttaca cttggcgaag atggagcaac tcatcaaatt ctggaagata ttggtttaat
       61 gaagatgtta ccgggaatga cagtaataaa tacatgcgat tttaaccaaa ccaaacaagc
      121 aactcttgca attgctgaat atcaaggtcc tgtttacctc agatttggga gaccaaaagt
      181 tcctaatttt attccttttg atagtgagtt cacaatagga aaaggtatta ctttaaaaga
      241 gggtacagat atcagcatta ttgcaaccgg acatcttgta tggaaagcat tagaggctgc
      301 agaactctta aacaaaagcg gtattaatgc tgaagtaata aatattcata ctattaaacc
      361 tttagatact gaactcatcc tcaactcggt aagtaaaacc agatgtgtag taaccgctga
      421 agaacatcaa attaacggtg ggatgggtga cagtattgct cagctattat ctagtaaaat
      481 gcctgtacct attgagtttg ttgctgttat ggatgttttt ggtcaaagtg gaaaaccaga
      541 taaattaatg aaatattacg gtcttgaaag tttaaatatt attgaagcag ccaagaaagc
      601 tatttccaga aaataaaggt atcttcgcct tacaatatca tcattaaata tcccagttgg
      661 ttcaaaaaaa aacaatagca gttattgtaa ttatttgtgc tatgctaata aattcactgg
      721 catattctca agtcaacaag aacaactgtg atacagttaa gatagtagct cccgcttacc
      781 tggttttaga tgatacttcc attaaagtgt atcatgatag tactgcaatt atatgcaatc
      841 ggtatattgt tataacgaaa aaaaatggct attcacttta ttccaaactt gttggagaat
      901 cacaaaaaag taaccttatc gataagtttt ttcagatgtt aattgcctct agcacacaag
      961 acacaatgtt agttaaaaac gatttgatta aagctgaaga tgcttacaac cagtactcag
     1021 gaaagattat aaggaacata aggattcagg ttctgaaacc aataggaccg actataagtg
     1081 ataccaatct acccgttttc acacgaatgg gtaacgcaat aaataagtct catttcagca
     1141 ctaataaaaa cgtactagaa cgcaaattac tatttcatgt aaacgacaca gtaaaccctt
     1201 tagaaatggt tgaaaacacc agagagctag cagtattacc ttatttacag gatgctacaa
     1261 ttattcttac taacgctaaa ggtgattctg ttgatgtact tgttctggca aaagacaaat
     1321 ttccttggat gccaggttta gatatttatg acattaatcg gatgacaatg catttgaaaa
     1381 atgttaacat ttttgggtta ggccaatctt tagatgcagg tataactatc gacacaaaaa
     1441 gtaaacctgc attttatcta tctgatataa attattatat cgacaatatg tacaaacaaa
     1501 tcgatggtgg cattaatttt catgtatcag agaatgaaaa agcatatcaa ttgttgctca
     1561 acagggagtt aataccacta agcattcgac ttgcaggagg gctaaatatc gctcaaattg
     1621 aagaaaacat agtaattgac cctaccgatg ttgaccgaag cgcatggttt tttaaataca
     1681 ggtattttga gttgtggtca tcatatcttt tctatgatga tttaaa
//
LOCUS       DASCQP010000434         7250 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001605357, whole genome shotgun sequence.
ACCESSION   DASCQP010000434 DASCQP010000000
VERSION     DASCQP010000434.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 7250)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7250)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7250
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001605357"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1275)
                     /locus_tag="QF480_07475"
     CDS             complement(<1..1275)
                     /locus_tag="QF480_07475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06440.1"
                     /translation="MQKPMLFLKKYKKLLVITSIVIASLVLLILVAQFIIGNILQNRL
                     EDSLSSSEKKDYKISVGNVKVNLFTMTLILKDVQIEPDSLLISQIKLQKWSQKKGFRI
                     NIPNLRVRYIGVISFIADKYVDVGSFVIKNAKIDLLTSGKSTIPKAKKVDKPATPFNI
                     DSIVLPGINGAILNRFLVKDFAFNIIDIKHNDTIFQTKSFNVQIKNIALIKNEDDSSS
                     FRLMLKDFDFHMSDERFQLPGDKYILSFDDMSFNMNQNQLIFKKLKITPRYSQSSMVE
                     LSEFQYEIYNCEIEKAEFNSLYPLNIIRSSKIFMSDVLIHNMKLSIFKDKRRPFDTKK
                     RPKLPQQLLKSLKQDLYIDSLIINDSELIYAERHDMMEEPMVVTLGKLNVKVKDITSI
                     FDSIVKGTVMSIRLQAKLQKKIPMGVNIYFPMR"
     gene            complement(1344..2678)
                     /locus_tag="QF480_07480"
     CDS             complement(1344..2678)
                     /locus_tag="QF480_07480"
                     /inference="COORDINATES: protein motif:HMM:TIGR00797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HJN06441.1"
                     /translation="MTNTKITYNRIWLVAYPIILGSIAQNIINFTDTAFLGRVGEIAL
                     GAGAIGGLFYLAVIMLGLGFGTGAQIIIARRLGEGKFKDIGEIVIHTIIFLTFLAILI
                     FILLKYVSVDLLRFSIDSTAIYTDSIAFLDIRAYGIFFAFINMAFRSFYVGIAKTKVI
                     TYTTLVLAAVNIFLDYGLIFGNLGMPEMGIRGAALASVVAEISAMIFFVIYTLTIIDY
                     KKYDLFCFARFRLEKLAKIFGVSIPMMIQQFVSLSVWFVFFLFVEKIGEMALAVSNII
                     RSVYVIAMIPIWGFAATTNTLVSYLIGQKRQDEVFSLIYRITLMSFCGVLIIVSFGLF
                     FPRMIIEIYTNQKELIDMGAPVLYIVNIGALFLSVGFVLLNSVSGTGKTTISLSIEII
                     VLLIYVSYIYVLIFVFKTDVFGAWTSELVYGFLLSIASWGYLKSKHWLKSKI"
     gene            2773..4035
                     /locus_tag="QF480_07485"
     CDS             2773..4035
                     /locus_tag="QF480_07485"
                     /inference="COORDINATES: protein motif:HMM:NF019310.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJN06442.1"
                     /translation="MKKNYMRPTFRKDVQYYKFCLYGFFKNLRFFDAFLMLFFLEKGI
                     NFLEIGILYSTREIVILIMEIPSGVISDALGRRKTLIASFLAYIISFIVFYFSQSYIS
                     LLLAMILFAVADATRTGVHKAMIFQYLKINNWSMHKIDYYGHTRSWSQSGSAISALLA
                     AFFVFYTERYDVVFIASIVPYLADMTLIYSYPKYLDGEIVHLSSKKIKQKFSIVIRAF
                     AQTIRHLSFFRILTNLSIYTGYYKAVKDYIQPLLKYVALSIPFFAYLNNQKKIAIIIG
                     IIYFIIYLLTALVSRYSGKFTKLFKYLNIPMNITVSIGLAIGIITGLTFQLGFYILPI
                     VGFIIVMIIENLRKPIGIGLVANISKDESMATTLSVTSQTKSLFAAILAPIIGLIADT
                     YNPGMGITIISILILLGLPFYWLKRQHV"
     gene            4075..4737
                     /locus_tag="QF480_07490"
     CDS             4075..4737
                     /locus_tag="QF480_07490"
                     /inference="COORDINATES: protein motif:HMM:NF015735.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HJN06443.1"
                     /translation="MRKYLLSIIVILFFSTAVDKLTAQTNENLFFVFLNTNPDKTEIS
                     DAEAEELQAGHLKNIGKLKDEGKLFAAGPFSGGGGMFVLHADNIDEANSYLSTDPAIA
                     ANRYNLEVFPFNIWNGDMCGAKEPYTMVTYQLVRLITNSDDIAKTIYNNRFFMADLAN
                     NTDQLVVQGQFKNDNDGVLILNVPDTKTADQIINKHPSVISGSLKYEIVPLWIAKGTF
                     CE"
     gene            complement(4744..5907)
                     /locus_tag="QF480_07495"
     CDS             complement(4744..5907)
                     /locus_tag="QF480_07495"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HJN06444.1"
                     /translation="MTKQIIMNIAILLLNKGRGSGEVAREHVRHLIKLGHKVYFLYPG
                     NEDEIDGAINVDIKLHTQIIPVHEYLPSAGKEQSQVARMSHEEMIEYLPDYERALSSI
                     ADDVDIFIGHHANLSAVAVHSVATEFGKPYVLFLHGTGIEPRHEGLWDEDNWRMIVKA
                     IVEAKGIIVTTEYVRDSLIKPLINLPDDRFLILPCGVNLVDFKPGNIGDIFEKYELPE
                     TYVICPGALTKSKGPQNVVEASTEYAELASTVFIGAGELQKELEEKLGDNGTFLGFVS
                     SEDKAKLIVAATLLIAAPEKNEHFGIIYAEALAGGTPCVAYEGGGVGSIVTSTEGILT
                     DRNPKELGKKVNYLLQNSGLRKQMAVSCRDRAEKLYDYNNLVKELVDWLKMVC"
     gene            6027..>7250
                     /locus_tag="QF480_07500"
     CDS             6027..>7250
                     /locus_tag="QF480_07500"
                     /inference="COORDINATES: protein motif:HMM:TIGR00835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005416 - amino acid:monoatomic cation
                     symporter activity [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid carrier protein"
                     /protein_id="HJN06445.1"
                     /translation="MIKKLVSIILFVFSVSYISIATVNDNQADTLFVISEGIAALPEI
                     PEENLTLSQKIDAEFTPIVEDLGEVLFWDPFEKLDLHDPVIYDENGNPVLNTDGTEKE
                     AAIPLVVIWLIFGAITFTLVLRFINFRGFKHAIMLVRGVYDNPDHKGEVSHFQALTTA
                     LSATVGLGNIAGVTIAISIGGPGATFWMIIAGLLGMSSKFVECTLGVKYRYIDKNGVV
                     SGGPMYYLRDGLKKKGMKWLGIILSIIFAILVIGGSIGGGNMFQANQAFSQLAYLVPT
                     IENYGMWFGVILAILVAFVIIGGIKSIARVTDKIVPFMAAIYVFTALVIIFMNIENTG
                     TAFMLIIDGAFGADALRGGIIGVLIVGFQRAAFSNEAGVGSAAIAHSAVKTDTPITEG
                     FVSLLEPFVDTVVICT"
BASE COUNT         2366 a         1266 c         1184 g         2434 t
ORIGIN      
        1 tctcattggg aaataaatat ttactcccat tggtattttc ttctgaagtt tagcttgcaa
       61 tcttatcgac ataactgtac ctttaactat actgtcaaat atcgaagtga tgtctttgac
      121 ctttacattt agtttaccaa gtgtaacaac catgggttct tccatcatgt cgtgcctctc
      181 agcataaata agttcactgt cattaatgat taagctatct atatacaaat cctgcttaag
      241 cgattttaac aattgttggg gcaatttggg tctttttttt gtgtcaaatg gacgacgttt
      301 gtctttgaat atactgagtt tcatgttgtg gatcaaaaca tccgacatga aaatttttga
      361 gctccgaatt atatttagtg gataaagaga gttaaattct gctttttcga tttcacaatt
      421 atatatttca tattgaaact cactcaactc aaccatacta ctttggctat atctgggtgt
      481 aatttttaat tttttgaaaa tgagttgatt ttgattcatg ttaaaactca tatcatcaaa
      541 tgataatata tatttatctc cagggagttg aaacctttca tctgacatgt gaaaatcaaa
      601 atctttaagc attaacctaa aacttgatga atcatcctca ttctttatta aagctatatt
      661 ttttatttgg acattaaaac tctttgtttg aaaaattgtg tcgttatgtt ttatatcaat
      721 tatgttgaaa gcaaaatcct ttactaaaaa cctgtttaga atagcaccgt taatacctgg
      781 taaaacaatg ctgtctatat tgaatggagt ggctggtttg tcgacttttt ttgcctttgg
      841 aatggtactc ttgcctgatg tcagcaaatc tattttcgca tttttaataa caaaacttcc
      901 aacatctaca tacttgtcag caataaaaga gataacgcca atatatctta ctcgtaggtt
      961 gggtatgtta atccggaatc cttttttttg tgaccacttt tgtagtttga tctgacttat
     1021 aagtaaacta tctggttcaa tttgtacatc tttcagtatt aatgtcatgg taaacagatt
     1081 taccttaaca ttaccaacgc ttattttata atctttcttt tcactgctag ataaagaatc
     1141 ctcaagtcgg ttttgtagta tatttccaat gatgaattgg gcaactaaga ttaacaaaac
     1201 aagcgaggca ataacaatgg atgttataac cagtaatttc ttgtactttt taagaaacag
     1261 catgggtttt tgcattggtt tatgcaaata taactatttt attcttaaga gattatagcc
     1321 tgctaatttg gaacgtaacg gcattaaatc tttgacttta gccaatgctt cgattttaag
     1381 tatccccatg aagcaatact tagcaagaac ccataaacta gttcagatgt ccatgcgcca
     1441 aaaacatcgg ttttaaatac aaatatcaaa acataaatgt aacttacgta aatcagcaaa
     1501 acgattattt caatagagag tgaaatagta gttttaccag tacctgaaac actgtttaat
     1561 aatacaaatc caaccgaaag gaacaaagct ccaatgttta ctatatataa tacaggtgct
     1621 cccatatcaa tcaattcctt ctgattagtg tatatctcaa taatcattct tgggaaaaat
     1681 aatccaaagc ttacaataat gagaacacca caaaagctca ttaatgtaat tctataaata
     1741 agtgaaaata cttcatcctg tcttttttga ccgattaaat aacttaccaa tgtattagtc
     1801 gttgccgcaa atccccaaat tggtatcatt gcaataacat aaacacttct gataatattt
     1861 gatacagcca gagccatctc acctatcttt tcaacgaaaa gaaagaatac aaaccaaact
     1921 gacagagaaa cgaactgttg gatcatcata gggattgata cgccaaaaat tttcgcgagt
     1981 ttttccaatc taaatctagc aaaacaaaac aaatcgtact ttttataatc tattatagta
     2041 agagtgtaga tcacaaaaaa tatcatagct gagatttctg caacaactga agccagggct
     2101 gcgccacgaa ttcccatctc aggcatacct aaattgccaa atattaaacc atagtctaaa
     2161 aatatattta cagcagcaag tacaagggtt gtataagtaa ttacttttgt tttagctatc
     2221 ccaacataaa atgatctgaa agccatattg ataaatgcaa agaaaattcc atatgcgcgt
     2281 atatccagaa aagcgatgga atctgtataa attgcagttg aatcaataga gaacctaagg
     2341 agatctactg aaacatactt taaaagtata aatataagta tagccaaaaa ggttaagaaa
     2401 ataatagtat ggataactat ttcgccaatg tctttgaact tgccctcacc taacctacgt
     2461 gcaattatta tttgagcccc tgtgccaaat ccaagtccta acataattac agccaagtaa
     2521 aataacccgc caatggcacc ggcaccaagt gctatttcac ccactcttcc taaaaacgca
     2581 gtatcagtaa agtttataat attttgagca atactgccca aaataatggg ataagcaacc
     2641 aaccaaattc ggttatatgt aattttagta ttagtcataa acgcggcaaa gataggaaag
     2701 agtttgattg ttcgattgct caattatgat acccatctca gtaattttgc ccaattaaaa
     2761 atatttttaa ttttgaaaaa aaactacatg agaccaacgt ttagaaaaga tgttcaatac
     2821 tataaatttt gcctctacgg gttttttaaa aaccttcgtt tttttgatgc tttcctgatg
     2881 ctttttttct tggaaaaagg aataaatttc ctcgaaatag gaattcttta ttcaacacgg
     2941 gaaatagtaa tattaattat ggaaatacca agtggagtaa tttctgatgc attgggcagg
     3001 agaaaaacac tgattgcttc atttcttgct tacataattt cattcattgt attctacttt
     3061 tcacaaagtt acataagtct tcttttagca atgatattat tcgcagtggc agatgcaacc
     3121 agaaccggag tacataaagc aatgattttc caatatctga aaataaataa ttggagtatg
     3181 cataagattg attattatgg acatactaga tcatggtctc agtcgggttc agcaatctca
     3241 gcacttctgg ctgcattttt tgtattttat accgaaagat atgatgttgt tttcattgct
     3301 tcaattgtac cctatcttgc tgatatgaca ctaatttatt cgtatcctaa atatcttgat
     3361 ggagagatag tacatttatc aagcaagaag ataaaacaaa aattcagtat agtgataagg
     3421 gcttttgccc aaactataag gcacttaagc tttttcagaa tactaacgaa cctttcaatt
     3481 tacaccggat attacaaagc agtaaaagat tatatccagc ccctgttaaa gtatgttgca
     3541 ctaagcatac ccttctttgc atatttaaat aaccaaaaga aaattgcaat tataattggc
     3601 atcatctatt ttataattta tttacttact gcattggtct ccagatactc aggaaaattc
     3661 acaaaacttt ttaaatatct gaacatccca atgaacatta ccgtgtcaat aggactagca
     3721 atcggaataa ttacaggatt gactttccaa ttagggtttt atattttgcc gatagttggg
     3781 tttataattg ttatgataat tgaaaatttg agaaaaccaa ttggaatagg attagtagcg
     3841 aacatatcaa aggatgaatc gatggcaaca actttgtccg ttacatcgca gactaaatct
     3901 ctatttgcag ccatattagc tcccattata ggcttgatag ctgatacata taatccggga
     3961 atgggaatta ccatcattag tattttaatt ttgttaggat taccgtttta ctggttgaag
     4021 cgacaacacg tttaaaaata tttgtacatt taccgccgtt caaaatcaat acaaatgcga
     4081 aaatatttat tatctattat tgtcattctg tttttttcaa cagcagttga taaactaaca
     4141 gctcaaacaa acgaaaactt gttttttgta ttccttaata caaaccccga caaaactgaa
     4201 ataagtgatg cggaggctga ggaactccaa gcaggacatc ttaaaaatat tggcaaactc
     4261 aaagatgaag gaaaactatt tgctgccggt ccattttcag gtggaggtgg tatgtttgtt
     4321 ctccatgctg ataacattga tgaagcaaat agttatctta gtacggatcc cgctattgct
     4381 gctaacaggt ataatttaga agtgtttccg tttaatattt ggaatggaga tatgtgtggt
     4441 gcaaaagaac catatacaat ggtaacttat cagctggtac gactaattac taatagtgac
     4501 gatattgcaa agacaattta caataaccgt ttttttatgg ctgatttagc gaataatact
     4561 gaccaacttg ttgtccaagg tcagtttaaa aatgataatg acggagtttt gattttaaat
     4621 gttccagata ctaaaactgc agatcaaata ataaacaaac atccatcagt aattagtgga
     4681 agcctaaaat atgagattgt accattatgg attgcaaaag gaacgttttg tgagtagcat
     4741 tagttaacaa accattttca gccaatccac gagctctttt acaagattat tatagtcata
     4801 aagtttttca gctctgtcac gacaagaaac agccatctgc tttcttagac ctgaattttg
     4861 taataaatag ttcacttttt tgccaagctc tttaggattt ctatctgtta atataccttc
     4921 agtagatgta actatcgaac caacaccacc accttcgtaa gcaacacaag gagttccacc
     4981 tgccagagct tcagcgtaaa taattccaaa atgctcattt ttctcaggag cagctataag
     5041 tagggttgca gcaactataa gtttcgcctt atcctctgaa gaaacaaatc ccaaaaatgt
     5101 tccattgtct cccaactttt cttcaagctc tttctgcaat tcaccagctc caataaaaac
     5161 tgtggatgcc aattcagcat attcagtcga tgcttcaacc acgttttgag gtccttttga
     5221 cttagtaaga gctcccgggc aaataacata tgtttcggga agttcatatt tttcaaatat
     5281 gtcaccaata tttcctggct taaaatctac aagatttact ccacatggta atattagaaa
     5341 acgatcgtcg ggtaaattta tcaaaggttt tattaggcta tctcttacat attctgtagt
     5401 aacaataatt ccttttgctt ccacaatagc tttaacgatc atccgccagt tatcttcatc
     5461 ccacaaaccc tcatgccttg gttcaattcc tgttccatgt aaaaataata cgtaaggttt
     5521 cccaaactcc gtagcaacac tatgaacagc tactgcactt aagttggcat gatgtccgat
     5581 aaagatatca acatcatctg caattgagct taacgccctt tcgtaatcag ggagatattc
     5641 tatcatttcc tcatggctca ttcttgctac ttgactttgt tcttttccgg cagatggtaa
     5701 atactcatgt accggaatga tttgagtatg caatttgata tctacattta tggcaccatc
     5761 aatctcgtct tcatttccgg gatataggaa gtacacttta tgtcccaact ttattaaatg
     5821 tcgaacgtgc tcacgtgcca cttcgccact tcccctacct ttatttaata ataatatcgc
     5881 aatattcatg atgatctgtt ttgtcatttt ctaatctgca aaaatataaa tttaataaat
     5941 tatgaaaatt acaatgagta aaaaactcca tttttcttat acttgcacca atttctgtag
     6001 ttcatgtatt ttgataaatc aatattatga ttaaaaaatt agtttcaatt attttatttg
     6061 tcttttcagt atcttatatt tcaattgcta cagttaatga taaccaggca gatacattat
     6121 ttgtaattag tgaagggata gctgcattac ccgaaatacc tgaagaaaat cttactttaa
     6181 gtcaaaaaat tgacgcggaa ttcactccaa ttgttgaaga tctgggagaa gttttatttt
     6241 gggatccttt tgagaaactt gatcttcatg atccagtaat atacgatgaa aatggaaacc
     6301 ctgttttaaa taccgacgga actgaaaaag aagcagcaat acccctggtt gtaatatggt
     6361 taatttttgg tgcaattacc tttacattag tactacggtt tatcaatttt agaggattta
     6421 aacatgcaat aatgcttgta agaggtgttt acgacaatcc tgaccacaaa ggcgaagtgt
     6481 cacattttca ggcactcact actgctcttt cagcaacggt tggacttggt aatatagcag
     6541 gtgtaacaat agcgatttca attgggggcc cgggtgcaac attttggatg attatagctg
     6601 gtttgcttgg aatgtcgtca aagtttgttg aatgtacatt gggtgttaag tatcgatata
     6661 ttgataaaaa tggagttgtt tctggtgggc ctatgtatta tttacgcgat ggacttaaga
     6721 agaaaggaat gaaatggtta gggataattc tttccatcat atttgcaatt ttagttattg
     6781 gcggatcaat tggtggaggt aatatgtttc aggctaatca ggcattttct caacttgctt
     6841 atttggttcc tactatcgaa aattatggta tgtggttcgg tgttattctt gccatattag
     6901 tcgcatttgt tattattggc ggaattaaaa gtattgcaag agttacagac aaaattgttc
     6961 cgttcatggc agctatttat gtttttactg ctttggtaat tatttttatg aatattgaga
     7021 atactggtac agcatttatg ttgatcattg atggtgcatt tggtgctgat gcgttaagag
     7081 gaggtataat aggtgtccta attgttggat ttcaacgcgc agcgttttca aatgaagctg
     7141 gcgttggatc ggcagcgata gcccactcag ctgttaaaac tgatacgcca attactgaag
     7201 gatttgtttc cctattagaa ccttttgttg atacagttgt tatatgcact
//
LOCUS       DASCQP010000435         2465 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001609917, whole genome shotgun sequence.
ACCESSION   DASCQP010000435 DASCQP010000000
VERSION     DASCQP010000435.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2465)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2465)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2465
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001609917"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1023)
                     /locus_tag="QF480_07505"
     CDS             complement(<1..1023)
                     /locus_tag="QF480_07505"
                     /inference="COORDINATES: protein motif:HMM:NF024910.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HJN06446.1"
                     /translation="MGKAKKLGLAGAIFVIVSSLAGSGIIALPQQLAQTGSITLISFL
                     LVTFGALFLTLVYVRAGTMFEDPSPTALATYVNPILGAKSGLFYVYGNLISNVSILLA
                     GLGYLVMFIPSLENSFILGITVIILIWLFIFLSLRGVGIITKVVSITVTLLLIGVITT
                     AVGGWFDFSIALFESNWNVSGKSEGTAIMAGFAVLIFAYVGVESVATNNELIKNPKKI
                     VPLATIVGFIIVAVIYIVGTTVLEGMFTAEELQKAPASFALSIEHIFHSKYAGEAISL
                     IMAIACIASFLVWNLSSASAAKTSADNGFLPKAYSYINSYGINSKGLIINGIIMTILE
                     VILMLMG"
     gene            1345..2283
                     /locus_tag="QF480_07510"
     CDS             1345..2283
                     /locus_tag="QF480_07510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005930334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004398 - histidine decarboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006547 - histidine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine decarboxylase, pyruvoyl type"
                     /protein_id="HJN06447.1"
                     /translation="MSEKRNYIFDASKVINGAVGSEEDFCMGYLNPDASGNGYISTLK
                     LSVGKVSIDNLDEVTEGIVSYDRCETNDAYIGGINMLTASSFCGLNGATWGIDLAEAE
                     NLRSNLLFEQKLPGGKTIPVHNVFPLLDATQRLFGTVKQQRFNPMPGAHVVCANKSIT
                     QKGPVWVWSAIALTFLEDRSSGANLFIEDANTCPADWSYDRVYNYLMDTLKKITKSVA
                     LCGEDQDLNYKEIFTGFKFLYIPENHVGCALTCAPYVTLAQNAIPDGKQASDLMQMSI
                     NEWEDTINLTPLEEIPLHQKGFLGHDGIKKEYGITK"
BASE COUNT          835 a          433 c          427 g          770 t
ORIGIN      
        1 acccataagc attaaaatca cttcgagtat tgtcattatt ataccattaa taatcaatcc
       61 tttactattt attccataac tattaatgta tgaatacgct ttaggtagaa atccattatc
      121 tgcactggtt ttagcagcac ttgctgatga aagattccaa acaaggaaac tagcgataca
      181 tgctatcgcc ataattaaag aaatcgcctc tcctgcatac tttgaatgaa aaatatgttc
      241 gatagaaaga gcaaatgaag ccggtgcttt ttgaagctcc tcagctgtga acattccttc
      301 aagaactgtt gttccaacaa tataaattac agcaactatt ataaagccaa caattgttgc
      361 aaggggtaca attttcttag ggtttttgat taattcatta ttcgttgcaa cgctttccac
      421 tcccacatat gcaaatatca aaacagcgaa acctgccatg attgcagtgc cttcagattt
      481 accacttaca ttccagtttg attcaaataa cgcgatacta aaatcgaacc agcctccaac
      541 tgcagtagta attactccta tcaacaaaag agttactgtt atggaaacca cttttgtaat
      601 aattcctaca cctctcaacg aaagaaaaat gaataaccat atcagtatta ttacggttat
      661 gccgagaatg aatgaatttt ctaatgatgg tatgaacatt accaaatatc ctaaaccggc
      721 aagaagtatt gagacatttg atatcagatt tccatataca taaaacaaac cactttttgc
      781 tcccaaaata gggttaacat atgtggcgag agcagtgggg ctaggatcct caaacattgt
      841 tcccgcccta acataaacaa gtgtcaggaa taatgctcca aaagttacaa gcaaaaatga
      901 aataagtgta atcgacccag tttgagccag ttgttgtggt aatgcaatga ttccactacc
      961 ggcaaggcta gaaacaatca caaatattgc tcctgctaat cctaattttt tggcttttcc
     1021 cataattagt tctcctagtt tttttttaaa ttatatatct aaaaaagtcg ttatctcaaa
     1081 caccaaataa ccagttgcaa tatcctaaag aagtgattgt ggttgttaaa gtttattgag
     1141 tccaccaaat gtaacacatt ttttccagat aatttcacaa taattaatag ccgtgtctct
     1201 atttaatagc ttatctatca aaaatacatg aaaccattaa ataggttgag ttaaaattaa
     1261 tgcatacttt tggtgaaccc aagggtgatc aataatttta aaaactatat tagcacaaga
     1321 tattaatcac ataaatctaa aattatgagt gaaaaaagaa attacatttt tgatgcgtct
     1381 aaagtgataa acggtgcagt gggaagtgaa gaagattttt gcatgggcta tctaaatcct
     1441 gatgcatctg gtaacggtta tatttcaact ttaaaacttt cggttggtaa ggtaagtatt
     1501 gataatttgg atgaagttac agaaggtata gtttcatacg atcggtgcga aacgaatgat
     1561 gcctacattg gtggaataaa tatgttaaca gcgtcttcct tttgtggcct gaatggcgcc
     1621 acctggggca tagaccttgc tgaagctgaa aatcttcgta gtaatttgtt gtttgagcag
     1681 aagttgccag gtggtaaaac cattcccgtt cataacgtat ttcctttgtt ggatgcaact
     1741 caacgacttt ttggaacagt taaacaacaa cgttttaatc ccatgcccgg agctcatgtt
     1801 gtttgcgcca ataaaagcat tacacagaaa ggacctgttt gggtttggtc ggcaattgcg
     1861 ctcacctttc ttgaagatcg ttcaagtgga gcaaaccttt ttatcgaaga tgcaaataca
     1921 tgccctgctg attggagtta cgatcgtgta tataattact tgatggatac tttgaagaag
     1981 attacaaaaa gtgttgctct ttgtggtgaa gatcaagatt taaactacaa agaaatattt
     2041 acaggtttta aatttttata tatacctgaa aatcatgttg gatgtgcttt aacttgtgcg
     2101 ccttacgtaa ctttggctca aaacgctatt cctgatggca aacaagcaag tgatttaatg
     2161 caaatgtcaa taaacgaatg ggaagatact attaatttaa cgccgctaga agaaattcct
     2221 ttgcatcaaa aaggattcct tggtcacgat ggaattaaaa aggaatatgg gattacgaaa
     2281 taagtattga ttgcttatga ttgaatatct gcattttaaa tagttagttc aattcttatt
     2341 ctatcagatt aacatgtcta aactcattgt gaaatgaaaa aaataaaatc cagcaaagcc
     2401 accattggtg tatttacact tgccatgatt aatgtagcgg caatattgtc gatgaaaaat
     2461 tttcc
//
LOCUS       DASCQP010000436         2277 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001613024, whole genome shotgun sequence.
ACCESSION   DASCQP010000436 DASCQP010000000
VERSION     DASCQP010000436.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2277)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2277)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2277
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001613024"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(205..>2277)
                     /locus_tag="QF480_07515"
     CDS             complement(205..>2277)
                     /locus_tag="QF480_07515"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN06448.1"
                     /translation="FTGIVVDLFENDFENVLVDFENFKAQYIEVSKMVPEWKNRFPMG
                     VVDELGKALETKDPGKIMPAYEAVGQVCFDCHAANMTKVQLKYHWRDMSTILVQDPLT
                     KEEIPFSLFNINSIQAQNAPQLPEDMAPRTETFSNFDETFVEPQTNERVFPGDYSMNE
                     DGSQSWDGEYRHWHVTPTGDTIVSFLNEAQAKSFRDKQNKQMSSRGIMDLVYDITDPS
                     FGLVPYRPGNDTIPLVDDIAIKNKVNKITKLEANIIENTVNQINATTSGWICDQYMTQ
                     MGHIDFFGVYDIDNSGLSSGANLEYDFSTNGDWENVAYGVRTTTTDGVPHAICGNFVG
                     AENLEDNDVTDFNQWYFWEPQTDQQVVPGDYSMDANHSVQIDWYGYEYNSIWNQWGHS
                     IRNVLQYDLLAGNPTLTFQDPDLTTCWDPMLQVEYPDDQTHEFPADISVAANGEPDSL
                     YAGTVYSHSDVSDQTNDGSCSDVTYLVTRTWNGMVGDYNSSNTASATHDQLINVQDTQ
                     GAYVLTTPFNQGDTLYRSDMSDSPDPTEEEWAEFGDNSQLSIERKFDKEIVYEDDISR
                     IWEMNQWGEDLCLNDPQDYFNYFVHIPKTVGISEKVAPPKPDNAYVYPNPSNGKFTLE
                     YISNDTQPLETILYNMHGQVVQEKVYKGLVPGKNNIEYGLTDAKPGMYILKTKKGMHF
                     ETEKINIK"
BASE COUNT          657 a          443 c          336 g          841 t
ORIGIN      
        1 catcctgatc ataagtgaac tcaatagcct tttgtttagt aagtctttct atctcttttc
       61 gagctaaact ctcaagttga ttaatatcac tctctctttt agcagaaccc attgacttaa
      121 tgagtttttg attaccatat tgcttctctg acttttcctt ctaagtcaaa aatttttgtt
      181 ttatttccca ttttaagaat tactttattt aatgttaatc ttctcagttt caaaatgcat
      241 cccttttttt gttttcaaaa tatacattcc tggtttagcg tcggttaatc catattcaat
      301 attattttta ccaggcacta gtcctttgta aactttttct tgaacaactt gtccatgcat
      361 attgtaaaga attgtctcta aaggttgggt atcatttgat atatattcga gtgtaaactt
      421 accattagaa ggatttggat aaacataagc attgtcaggt tttggaggag ctaccttttc
      481 tgaaattcca acagtctttg gtatatgtac aaaataattg aaataatctt gaggatcatt
      541 tagacaaaga tcttctcccc attgattcat ttcccaaatc ctactgatat catcttcata
      601 aactatttct ttatcgaatt ttctttctat tgaaagttgg ctgttatctc cgaattctgc
      661 ccattcttct tctgttggat ctggactatc actcatgtct gatctgtaaa gggtgtctcc
      721 ttgattgaaa ggagttgtta aaacatatgc tccttgtgtg tcttgtacgt taattaattg
      781 atcatgagtt gctgaagctg tatttgaaga attataatct cccaccatcc cattccatgt
      841 tctcgtcact aaataagtta catcagaaca agaaccatca tttgtttgat ctgaaacatc
      901 tgaatgtgaa taaaccgttc cagcatacaa actatctggt tctccatttg ctgctacaga
      961 aatatctgca ggaaattcat gtgtttgatc atcaggatat tctacttgaa gcattggatc
     1021 ccagcaggtt gttagatctg gatcttgaaa agttaatgtt ggatttcctg ccaaaagatc
     1081 atattgtaat acattcctta ttgaatgtcc ccactgattc caaattgaat tatattcata
     1141 cccataccaa tctatttgta ctgagtgatt tgcatccatt gaataatctc ctggaacaac
     1201 ttgttgatca gtttgaggtt cccagaaata ccattgatta aaatctgtta catcattatc
     1261 ttccaaattt tctgcaccaa caaaattccc acagatagca tgtggtactc catccgtggt
     1321 tgtagttctc actccataag ctacattttc ccaatcccca tttgttgaaa aatcatattc
     1381 taagtttgct cctgaagata aacccgagtt atcaatatca taaactccaa aaaaatcaat
     1441 atgtcccatt tgagtcatgt attgatcaca gatccatcca gaagttgttg cattaatttg
     1501 attaactgta ttctctataa tatttgcttc taatttggtt attttattta ctttgttctt
     1561 tattgcaata tcatctacta aaggaattgt atcattacct ggcctatatg gaactaaacc
     1621 aaatgaagga tccgtgatgt cataaactaa atccattatt cctcttgaac tcatttgttt
     1681 attttgttta tctctaaatg attttgcttg tgcttcattt aagaaagaaa caattgtatc
     1741 tcccgtgggt gttacatgcc agtgcctgta ttctccatcc catgattggc ttccatcttc
     1801 attcattgaa taatctcctg gaaaaactct ctcatttgtt tgaggttcaa caaatgtttc
     1861 atcaaagtta gaaaaagttt ctgttcttgg cgccatatct tcaggtaatt gaggggcatt
     1921 ttgtgcttga atagaattta tattaaacaa tgaaaatggg atttcctcct ttgtgagagg
     1981 atcctgaaca agtattgtgc tcatgtctct ccagtgatat ttcagttgaa ctttagtcat
     2041 gttggcagca tgacaatcaa aacaaacttg tccaacagct tcataggctg gcattatctt
     2101 gcctggatct ttagtctcaa gcgcctttcc aagttcatca acaacaccca ttggaaatct
     2161 gtttttccat tcaggaacca tttttgaaac ttcaatatat tgggctttaa aattttcgaa
     2221 atcaactagc acgttctcaa agtcattttc aaacagatcg acaacaattc ccgtaaa
//
LOCUS       DASCQP010000437         6605 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001613167, whole genome shotgun sequence.
ACCESSION   DASCQP010000437 DASCQP010000000
VERSION     DASCQP010000437.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 6605)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6605)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6605
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001613167"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..2476
                     /gene="metH"
                     /locus_tag="QF480_07520"
     CDS             <1..2476
                     /gene="metH"
                     /locus_tag="QF480_07520"
                     /EC_number="2.1.1.13"
                     /inference="COORDINATES: protein motif:HMM:TIGR02082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008705 - methionine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methionine synthase"
                     /protein_id="HJN06449.1"
                     /translation="VLDVNMDDGMLDAEKEIVTFLNNLASDPDVSRLPIMIDSSKWDV
                     IEAGLKCIQGKGIVNSISLKNGEEEFLHHAKLIKNYGAAVIVMAFDEDGQAADLERKI
                     SICQRAYNLLINNGFPPEDIIFDPNILAIGTGISEHANYAVDYINAVRWIKDNLPYAK
                     VSGGVSNLSFSFRGNNAVREAIHSVFLFHAIEAGMDMGIVNPGMLQIYDEIPDDLRTL
                     VTDVVLNRRKDSTERLLTFAEKIVDDGKTKNIKSQEWRELSVNKRIEHALIKGITEFI
                     EEDVEEARKHMSSAIDVIEIPLMNGMNTVGDLFGSGKMFLPQVVKSARVMKQAVAYLL
                     PFIELENDGKLVSNGKIVLATVKGDVHDIGKNIVGVVLSCNNYEVIDLGVMVPAEKIL
                     DIVEKENADLLGLSGLITPSLEEMVHVASELTRKKMNIPLLIGGATTSAIHTAVKISP
                     HYSHPIIHVRDASKVIGVAGKLLSTIGRDSFLNETENEYNLLRDKHAKKIIDKEYISL
                     ENARQNGFTPDWENHEVIVPAITGTKVLDNIDLKEVRKYIDWTFFFHAWKLNGKYPAI
                     LKDPVKGEKAQELFDDAQNMLDLIIKDKWLLAKAVFGIFPAYSTGDDVIVLDSDQNEQ
                     SVFHFLRNQEKKSDNIPNLCLSDFIASQSSNKEDYIGGFVVTAGLGIEKHLKRFNDEN
                     DDYSAIMLKVLADRLAEAATELLHEKVRKEYWGYAPNENFEVKDKLREKYRGIRPAPG
                     YPACPEHSEKKSLFNLLNAEEATGVSLTENYAMYPAASVSGYYFSHPNSQYFNVGKLL
                     LDQIEDYAARKNMSIEQIKKLLPMNT"
     gene            2620..3579
                     /locus_tag="QF480_07525"
     CDS             2620..3579
                     /locus_tag="QF480_07525"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013613554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004489 - methylenetetrahydrofolate
                     reductase (NAD(P)H) activity [Evidence IEA];
                     GO_process: GO:0006555 - methionine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HJN06450.1"
                     /translation="MEKTVIQHIEESKQTLFSFELLPPLKGHDFESTQQAIDPLLEFN
                     PSFINITYHQQEVVYEDAGNGLMRKQTIRKRPGTVGISAAIKYRYGINVVPHIICGGF
                     SKEDTENALIDLQFLGVNNLLVVRGDPQPGTKVFMPEPDGNEHAIDLIEQIVNLNNGK
                     YLDEKLKNTRSMDFCIGVAGYPEKHGESPNMDSDLYFLKKKIQAGASYIVTQMCYDNQ
                     KYFNFVKLCREKGINVPIIPGLKPIAIKENLINIPKSFSVDLPVDLVKEVLKCKNNKE
                     IRQVGVEWAIQQSKELLDFGVPVLHYYTFGQSDNIQKIAKAVF"
     gene            complement(3620..6148)
                     /locus_tag="QF480_07530"
     CDS             complement(3620..6148)
                     /locus_tag="QF480_07530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06451.1"
                     /translation="MNTEHRILNESIELFRHSTLDIHYSLFNKYLKYIKVLGYFNFFL
                     FILLNSTIAQSQVYFNTLEATPDEGNWIGLSTVDSGFAYSGNNYSITDSLKPYGLGIE
                     QLFPKPLLHSNVLVLISGWVKSNIKNSRAIFVVTLVKDKKTLFWKGIPLNSVLSEENH
                     WHYFSDSILVPASLTSESKFKAYLWNQDRASVTGIDDLRIEFRAIDNPTFIPELTNYI
                     PKNINDNSSRILFTNSYYSIIYKPIDKIISILDNSNIVLLNNITYYSEREVKGDKSVT
                     QLKWRFTGSNNTKNSKKLFFKTSDQNGKLKLVIKCDNNSQEIKFVVEEKYRKKQTVSR
                     ESLIFDYSPNLDEVYRSNRKLDTNNFQSEYWLDKQGVKIGKGQNSLLTYHTPDISSLQ
                     LDTKNKLLFANLDYEKDHPFFRFPLNPDSTDWKKEESTSRYKKGDKREYQFSISVGNK
                     SKTLPRFMKNPSGYEATYIWTEHADYSDVRTNRATYFGSENISHPNSAVGGFVRFNIP
                     VTKSVFYDNPDSVSNYDASGRVFQSLESTILTDSLFSEFLFQIAEKGNEICLHTPEQF
                     TTTPQRLEEALLYMQANFKSPSWIDHGNNNGPQNNREDLICDGTLEDSPYYAIDLWNK
                     YGVKYFHNSYYEELNTYKDWQFDSSLEKPFSGFGDFFPKPDYYQHPTRTRNLIHWPTT
                     SALFITEPYLWDYLFNLNKLNGLVNNRAVEINHTYPAWVDPKKGMWTYDKDSVIVSQP
                     GFNLALTNMALLRDEGKLNICTIDNFLDYRTAIDNIDYRFLPDGRIQLTNNGNSDINE
                     LSMVAKAKAVTVNSLIPYQKKVDDEIIFWFDIGAGDSKIIRVVE"
     gene            complement(6227..>6605)
                     /locus_tag="QF480_07535"
     CDS             complement(6227..>6605)
                     /locus_tag="QF480_07535"
                     /EC_number="2.7.2.7"
                     /inference="COORDINATES: protein motif:HMM:NF013067.3"
                     /note="catalyzes the phosphorylation of 2-butanoate to
                     butanoyl phosphate; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="butyrate kinase"
                     /protein_id="HJN06452.1"
                     /translation="GDVTKDEVMEMITSKGGYYAYLGTSSISKINERIANGDEKALAI
                     SYALSYQISKEIASHYATLKGDVDCIILTGIIPDNEQFIVNVKERVRGLAPIALYPSV
                     NDFAAFASFGLMVLKGEIEVKKY"
BASE COUNT         2184 a         1057 c         1211 g         2153 t
ORIGIN      
        1 ggttcttgat gttaacatgg atgatggtat gctggatgca gagaaagaga tagttacatt
       61 tttaaataat ctggcatctg atccagatgt gtccagattg ccaattatga tcgattcatc
      121 taagtgggac gttattgagg ccggattaaa atgtattcag ggaaaaggaa ttgtgaactc
      181 tattagttta aaaaatgggg aagaagagtt tctacatcat gctaaattaa taaaaaacta
      241 tggcgcagct gttattgtaa tggcctttga tgaagatggc caggcagctg atttggaaag
      301 gaagatatcc atctgccagc gagcatacaa tctgttaata aataatggat tccctccaga
      361 agacattatt ttcgatccta atattcttgc aattggaaca ggtatttctg agcatgctaa
      421 ttatgctgtt gattatataa atgcagttag atggataaaa gataatcttc catatgcaaa
      481 agtaagtggc ggagtaagta atctttcgtt ttcttttagg ggcaataatg ctgtacgtga
      541 agcaattcat tcggttttcc tttttcatgc aatagaagct ggaatggata tggggattgt
      601 caaccctggg atgcttcaga tttatgatga gatccccgat gatcttcgta ctcttgttac
      661 agatgttgtg ttgaacagga gaaaagattc tactgagaga ctgctcacat tcgcagagaa
      721 gatagttgat gatggaaaaa ctaaaaatat taagtctcaa gaatggcgtg aattatctgt
      781 taataaacgc attgaacatg cgttaattaa aggtattact gaatttattg aggaggatgt
      841 tgaggaagct cgtaaacata tgtcaagcgc gatagatgtt atcgaaattc ctttaatgaa
      901 tggtatgaac accgtgggtg atctttttgg ctcaggcaaa atgtttttac cacaagtagt
      961 gaaaagtgca cgtgttatga agcaagctgt tgcttattta ttacctttta ttgaacttga
     1021 aaatgacggc aaactggtta gtaacggtaa aatagttctg gctactgtaa agggcgatgt
     1081 tcacgatatt ggtaaaaata ttgttggagt tgtgctatcc tgcaacaatt atgaagtaat
     1141 tgacctaggt gtaatggttc cagcagaaaa aatattagat atcgtcgaga aggaaaatgc
     1201 tgatttgctt gggcttagtg gcttaattac tccatcatta gaagaaatgg tacatgttgc
     1261 ttcagagctt acaagaaaga aaatgaacat acctttgcta ataggtggag caactacttc
     1321 tgcaatacat actgccgtta aaatatctcc acattattct cacccaataa ttcatgtacg
     1381 cgatgcttca aaagtgattg gagttgccgg taaattactt tccacaatcg gaagggattc
     1441 ctttttaaat gaaacagaaa atgaatacaa cttgttacgt gacaagcatg caaaaaagat
     1501 tattgataag gaatatatca gccttgaaaa tgcgcgccaa aatggattca ctcctgattg
     1561 ggaaaatcac gaagttatag ttccagcaat aactggcact aaagtactgg ataatataga
     1621 tttgaaagag gttagaaagt atatagactg gactttcttt ttccatgcat ggaaactaaa
     1681 tggaaaatat cctgctatct taaaggatcc tgtaaaaggt gaaaaagctc aagaactatt
     1741 tgatgatgca caaaatatgt tagacctaat tatcaaagac aaatggctcc tggctaaggc
     1801 agtgtttggg atatttcccg cttattcaac gggtgatgat gtaattgttt tagattctga
     1861 tcaaaatgaa caaagcgttt ttcatttttt gagaaatcag gagaaaaaat ctgataatat
     1921 tccaaatttg tgtttaagtg attttattgc gtcacaatct agtaataaag aggattatat
     1981 aggagggttt gtggtaaccg ctggactagg aattgagaaa catcttaaac gattcaatga
     2041 tgaaaatgat gactatagtg caatcatgtt aaaagtattg gccgacagac tggcagaagc
     2101 tgctactgaa ctgcttcacg aaaaagtaag gaaagaatat tggggttatg ctcctaatga
     2161 aaattttgaa gttaaagata aactaaggga aaagtatcgg ggaatcaggc ctgcccctgg
     2221 atatccagct tgccctgaac attccgaaaa gaaatcatta tttaatttgc ttaatgctga
     2281 agaagcaaca ggcgttagtc tgacagaaaa ttatgctatg tatccggcag catctgttag
     2341 cggttactat ttttcacatc ccaattcaca atattttaat gttggaaaat tgttgctgga
     2401 tcaaattgag gattatgcag cacgaaagaa tatgagtatt gaacaaataa aaaaactttt
     2461 accaatgaat acttaactgc atagtagtct agaatagaaa taattgactt tgtgatactt
     2521 tgtgaatacc ttaagcccct taggggtaag atttaaccac aaaggaacac aaagtgcttc
     2581 acaaaggaac acgaagaaag aattaaaaaa acgaagttta tggaaaaaac agtaatacaa
     2641 cacatagaag aatcaaaaca aacattgttt tcatttgaat tattaccacc cttaaaaggg
     2701 catgattttg aatctacaca acaggctata gatccacttt tggaattcaa cccctcattt
     2761 attaatataa cttatcatca gcaggaggta gtttatgaag atgcaggtaa tggattaatg
     2821 cggaaacaaa ccatacgtaa gagacccgga actgttggta tttcggcggc cattaaatac
     2881 agatatggta taaatgtagt ccctcatata atttgtggtg gatttagcaa agaagacact
     2941 gaaaatgcac taatcgacct tcaatttctg ggtgtcaata atttacttgt tgtaagaggt
     3001 gatccgcaac ccggcactaa agtttttatg ccagaacctg atggtaatga acatgctatt
     3061 gatcttatag aacagattgt aaatctaaat aatggcaaat atcttgatga aaaactgaaa
     3121 aatactcgct cgatggactt ttgcattggt gttgccggtt atcccgaaaa acatggtgaa
     3181 tcaccaaata tggatagcga tttatatttt ctaaagaaga agattcaagc aggtgcatca
     3241 tatatagtaa ctcagatgtg ttacgataat caaaagtatt tcaactttgt aaaattatgc
     3301 agagagaaag gaattaatgt tccaattatc cctggtctta aacctattgc aattaaggag
     3361 aatctaatca atattcctaa atcttttagc gttgacctac cagtagatct cgtaaaagaa
     3421 gtacttaagt gtaaaaataa taaagaaata cggcaagtag gggttgagtg ggctattcaa
     3481 cagtcgaaag aattgttaga ctttggcgta ccagtattac attattacac atttggacaa
     3541 tcagataata ttcagaagat tgctaaagca gtgttttaag ttccgtttgt atctttatca
     3601 gaataaaact aaccgattct tactcaacca cccttataat cttcgaatct cctgctccaa
     3661 tatcaaacca aaaaataatt tcatcatcaa cctttttttg atatggaatt aggctgttaa
     3721 cagttactgc ctttgctttg gcaaccatcg atagttcatt aatatcagaa ttaccattgt
     3781 tggttagctg gattctgcca tcaggtaaaa atctgtaatc aatattgtcg attgcggttc
     3841 gataatccag aaaattgtca attgtacata tatttaattt gccttcatct cgcaggagtg
     3901 ccatattagt tagtgcaagg ttgaagccgg gttgagaaac tattactgaa tctttatcat
     3961 aagtccacat tcctttttta gggtctaccc atgctggata agtatgatta atttctactg
     4021 ccctattatt taccaagccg tttaacttgt tcagattaaa cagataatcc cataaataag
     4081 gttctgttat aaacaatgca cttgttgtag gccaatgaat taggttcctg gttctggtag
     4141 gatgttggta gtaatcgggt tttggaaaaa aatcaccaaa accactaaaa ggcttttcca
     4201 atgagctatc aaattgccag tctttatagg tattaagctc ttcataatat gaattatgaa
     4261 agtatttcac tccatattta ttccacagat cgatggcata gtaaggtgaa tcttctaatg
     4321 tgccatcaca aatcaagtct tcccgattat tttgtggtcc gttattatta ccatgatcaa
     4381 tccacgaagg tgatttaaag tttgcctgca tgtataataa agcttcttcc agtctttgag
     4441 gagtcgtggt aaattgttca ggagtgtgta aacaaatttc atttcctttt tcagcgattt
     4501 gaaatagaaa ttctgaaaac aatgaatcgg ttaatatagt actttcaagt gattgaaaaa
     4561 ctctgcctga agcatcataa ttggaaacgc tgtcggggtt atcataaaaa acactttttg
     4621 taactggaat attaaatcta acaaaaccac caacagcact attagggtga cttatatttt
     4681 cagatccgaa ataggttgct ctgtttgttc ttacatcact ataatcagca tgttcggtcc
     4741 aaatgtatgt tgcctcatag ccactaggat ttttcatgaa acgagggagg gtttttgatt
     4801 tatttcccac acttatgcta aattgatatt cacgtttatc acccttcttg tacctactgg
     4861 ttgattcttc ttttttccag tctgtactgt caggattcaa aggaaagcga aagaagggat
     4921 gatctttttc ataatcaaga tttgcaaaaa gtagtttgtt tttggtatct aattgcaaag
     4981 aagaaatatc aggagtatga taagttaaaa gtgaattttg tcctttgcca atcttaactc
     5041 cctgtttatc aagccagtac tcactttgaa aattatttgt atccaattta cgattactac
     5101 gataaacttc atctaaattt ggtgaataat caaatatcaa agattccctg cttactgttt
     5161 gtttcttcct gtatttttct tccacaacaa actttatttc ctgactatta ttatcacatt
     5221 ttataacaag ttttagcttc ccattttgat ctgatgtttt aaagaataat ttcttgctgt
     5281 tttttgtatt gtttgatcct gtaaaacgcc attttaattg tgtcacagat ttatcaccct
     5341 taacctccct ctcactataa taggttatgt tatttagcag aacaatattt gaattgtcta
     5401 gtatgctaat tattttatca atgggcttat atattattga ataataacta tttgtaaaaa
     5461 gtattcttga tgaattgtca tttatatttt tagggatata attggttaat tcaggaataa
     5521 atgtaggatt atcaatagcc ctgaactcaa tgcgaagatc atctattcca gtaactgatg
     5581 ccctatcttg attccataaa tatgctttaa attttgattc gctcgttaga ctggctggta
     5641 ctagaattga atctgaaaaa taatgccaat gattttcttc actcaaaaca gaattaagag
     5701 gaataccttt ccagaacaat gtctttttat cttttacaag ggttactaca aatatggccc
     5761 ggctgttttt tatgttactt tttacccagc cactaattaa tactaaaaca ttggaatgta
     5821 gtaaaggctt agggaataac tgttcaatac caagaccgta aggtttgagt gagtcagtta
     5881 ttgaataatt gttgccagaa tatgcaaaac ctgagtcaac agtacttagg ccaatccagt
     5941 tgccttcatc tggtgttgct tcaagagtat tgaaatatac ttgactttgt gctattgtcg
     6001 aattcaataa tataaaaaga aagaaattga aataacccag aaccttgatg tacttcaagt
     6061 atttattgaa taatgaataa tgaatatcca atgttgaatg ccgaaatagt tcaatacttt
     6121 cattcaaaat tcggtgttca gtattcaaga ttcaagattt aatttaacaa ttttatttgc
     6181 agatttctat caaaacaaag atcagaattt gatttattga gatctactaa tattttttaa
     6241 cctctatttc accttttaac accatcagtc caaaggaagc aaatgccgca aagtcgttaa
     6301 ctgaaggata gagagcaatt ggagccaatc ctcgcacacg ttctttaaca tttacaatga
     6361 attgttcatt atcagggata attcctgtaa gtattataca gtcaacatca ccttttaatg
     6421 ttgcatagtg tgatgctatt tcttttgaaa tttggtaaga aagggcatat gaaattgcta
     6481 aggctttttc gtctccatta gcgatacgtt cgtttatttt tgatatgctt gatgtgccaa
     6541 gataggcata atatcctcct tttgatgtaa tcatttccat cacctcatct ttagttacat
     6601 cacca
//
LOCUS       DASCQP010000438         4632 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001614646, whole genome shotgun sequence.
ACCESSION   DASCQP010000438 DASCQP010000000
VERSION     DASCQP010000438.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4632)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4632)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4632
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001614646"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1050)
                     /gene="had"
                     /locus_tag="QF480_07540"
     CDS             complement(<1..1050)
                     /gene="had"
                     /locus_tag="QF480_07540"
                     /EC_number="1.1.1.368"
                     /inference="COORDINATES: protein motif:HMM:TIGR03201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0019439 - aromatic compound catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-hydroxycyclohex-1-ene-1-carbonyl-CoA
                     dehydrogenase"
                     /protein_id="HJN06453.1"
                     /translation="MEKNKIQSWKMTELNSEFKLTESDFPELNENEVIIKIAGCGVCH
                     TDLSFWHFGVKTKHELPLTLGHEISGKIIAGPNHLLNKKVIIPAVLPCGECELCKGGR
                     GNICQNQLMPGNDFDGGFASHIKVPHKNLCYVPECLLDKYRLADLSVVADAITTPYQV
                     LKKSELKEGDFAICIGVGGVGIYGALLAKIMGAKVLAIDIADSKLDLAKEHGIDAVLN
                     VSGLDPREVKQKVREIAKELKVSRYGWKILEMSGTVQGQELGYALITFASTMSIVGFT
                     MEKPNVRLSNLMAFDAKLIGTWGCKPELYNDVLDFIDQEKLKIGDFIETFPMSEINEV
                     FKNTLDHKYTKRSVLV"
     gene            complement(1385..2401)
                     /gene="hisC"
                     /locus_tag="QF480_07545"
     CDS             complement(1385..2401)
                     /gene="hisC"
                     /locus_tag="QF480_07545"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004400 - histidinol-phosphate
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HJN06454.1"
                     /translation="MDKKTREDIIKLSQNENPFGASPYALKAIREHELSINRYPEPHS
                     STLKTELADHFGLTPDNIFVSAGSIEALDILIRNFIGKGENLIIPKLTFVACKIIAEV
                     FGVETKFSEMRDYNIDIGSIIENQDEQTRMIIVASPNNPTGTIITEKELIRLLENVSP
                     HTFVIVDEAYCEYVSDVDYPDTIGLQNIYPNLIVLRTFSKIYGLAGLRVGYAIATKEI
                     VEQLEHYQPPFTVNRLATVAASASIKDKQYVNDSFKVNMETRSIIEKEIKGLGYNIVP
                     SQGNFIFIHFDSIEERNLIFDRLNSKNVFARKMDYFGDPQAFRLTIPKPRNCQSVIDC
                     FNYT"
     gene            complement(2404..3267)
                     /locus_tag="QF480_07550"
     CDS             complement(2404..3267)
                     /locus_tag="QF480_07550"
                     /inference="COORDINATES: protein motif:HMM:NF013134.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HJN06455.1"
                     /translation="MEFDVISPKSTPELLSVIADNQANNFRISAGFTDLIHQIKSIQT
                     KDLILINLAQLDEPNFKQIVENENNIQIGALVTATEIVDDKIIEENFPVLHQAASKLA
                     STQIRNVATVGGNICNVSPSGDMTAALIALKATCIILDCDGSEREEQLSSFIRGLKKT
                     SLTKKEVIKNITIPKNSTHNIKSGFEKIGSRKSMEISIVSLAYHFQMNKDGNVIDAGV
                     ACGAVAPTIPFTTSACELLIGKNIYSISDTVKEEFACKVLEYATPISDIRASDWYRKE
                     VLFNISKTIFE"
     gene            complement(3294..>4632)
                     /locus_tag="QF480_07555"
     CDS             complement(3294..>4632)
                     /locus_tag="QF480_07555"
                     /inference="COORDINATES: protein motif:HMM:NF042649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HJN06456.1"
                     /translation="TSWGATTPFVMMQAFSSLYQVPACKFDSQAVYTNNPFAGSFRGY
                     GNPQATFSIEINIDLMAEELGMDKAEIRLINANYKGEVTGQGLHFKTCGAIPALETVI
                     KKSQFDQIYNESKKGRYRRGIGLGSMLHVGGGAKIYRSDGCGTTLKLDDYGYLTIITG
                     SSEIGQGSETVLAMIAIEELGIPIEKIKVINTDTDVKPWDVGVHASRTSFVAGNSLLG
                     AIKLLKGKLNKKASELLNVVTEDWVYQDGMMLFNEFEIKVDKVAREIHFGSPHELCTV
                     NYFYEPPSRFQDKDFKGDVSGNYAFATQAIEVEVDTVTGNVNVLNVHVSQDVGRVLNP
                     IGLQGQIEGGVAIGIGYALTEEMIYENGILMNPSFHGYKLLTTTDMPNVHFYPIESYD
                     EAGPYGSKGAGEAPLIPTAAAIANAVSNAIGIRFDSLPITAEKVLRALSENTK"
BASE COUNT         1393 a          906 c          669 g         1664 t
ORIGIN      
        1 aaccaatact gatcttttag tgtatttatg atctaatgtg tttttaaaaa cttcattaat
       61 ttccgacatt ggaaaagtct ctataaaatc ccctattttt agtttttcct gatcaataaa
      121 atcaagaaca tcattataaa gttcaggttt acaaccccat gttccaatta atttagcatc
      181 aaaggccatc agattactta accttacatt gggtttttcc attgtaaatc caacaattga
      241 cattgtagat gcaaatgtaa ttaaggcgta tccaagctct tgaccctgga cggttcccga
      301 catttctaat atcttccacc catatctaga gaccttaagt tctttggcga tctctcttac
      361 tttttgtttc acctctctgg gatccagacc gctaacgttt aaaactgcat ctatcccatg
      421 ctccttggcc aaatcaagtt tagaatcagc aatatctatt gcgagtactt tggctcccat
      481 aatttttgca agcagagctc catatatacc aactcctcca actccaatac atattgcaaa
      541 atctccttct tttaattctg acttttttag tacttgataa ggagtagtta tagcatcggc
      601 aacaacagag agatctgcta gtctatattt atccaataag cattccggta cgtaacatag
      661 atttttgtga ggaactttta tgtgtgaagc aaatccgccg tcaaagtcgt taccaggcat
      721 gagttgattc tgacatatat ttccccttcc tcctttgcat aattcgcatt cgccacaagg
      781 cagaacagcc ggtataatta cttttttatt taacaaatga ttagggccag caattatttt
      841 accactaatt tcatggccta gggtcagggg aagttcgtgt ttggttttta caccaaaatg
      901 ccaaaagctt aaatcagtat gacatacacc acatcctgca atttttataa ttacctcatt
      961 ttcattcaat tcaggaaaat cactttctgt gagtttaaat tctgaattca attccgtcat
     1021 tttccatgac tgtattttat tcttttccat taatttttca ggtttaaatt ttgaatgatt
     1081 taatattgtc tgctgaattt attttccgct acttgggttt acattattta atttatttca
     1141 ctccattcat tattatgctt tttcaattct tatttcagca tttgacaaat ttactttttt
     1201 ttatttcaaa ttatcctttg attcatcacc ttcttcaaca ataattcaaa tttaaaaaaa
     1261 acttagaaat aaatcttgcc acacatgcta ctcaataatt agttgttgtt gatttcgtat
     1321 atttcacaaa gaagagtatt gaatgaaaaa atataggttt tttaataaat atcttatttg
     1381 gtctttatgt ataattgaag caatcaatta cagattgaca gtttctcggt tttggtatcg
     1441 ttaatctaaa ggcctgagga tcaccaaaat aatccatttt tctagcaaat acattcttgc
     1501 tattgagccg atcaaaaatc aaattacgtt cttctatact gtcaaaatgt ataaagatga
     1561 aattgccctg agaaggaaca atattatacc ctaagccttt tatttctttt tcaataattg
     1621 aacgtgtttc catattcact ttaaaactat cattaacata ttgtttatct ttaattgatg
     1681 cagaggctgc tactgttgct aatcgattga ccgtgaatgg aggttgataa tgttccaatt
     1741 gttcaacaat ctcctttgtt gctatggcgt accccaccct caaaccagcc aatccatata
     1801 ttttagaaaa cgttctcaac acaattagat taggatatat attttgtaat cctattgtat
     1861 caggataatc cacatcggat acatactcgc agtatgcttc atctactata acaaaagtat
     1921 ggggtgatac attttccagc aacctaatca actctttttc agtaatgatg gtaccggttg
     1981 gattgttagg gcttgcaacg ataatcattc tggtttgttc atcctggttt tcaataatag
     2041 atccaatgtc aatattataa tccctcattt cggaaaactt agtttcaaca ccaaagacct
     2101 cagcaattat tttgcaggca acaaaagtga gttttggaat aatcaggttt tcacctttcc
     2161 caataaaatt cctgataaga atatctaacg cctcgatcga acctgcactt acaaaaatat
     2221 tgtcaggagt tagtccaaaa tgatctgcta actctgtctt taatgtacta gaatgtggct
     2281 caggatatct atttatggat agttcatgtt ctcttatcgc ttttaaggca tagggggatg
     2341 caccgaatgg attttcattc tgagacaatt tgataatatc ttctcttgtt tttttatcca
     2401 tgtttattca aatatggttt tactaatatt aaatagaact tcctttctgt accaatcaga
     2461 ggctcttatg tctgagattg gcgttgcata ttctaatact ttacaggcaa actcctcctt
     2521 aactgtatca gagatactgt atatattttt ccctattaat aattcacaag ctgaagttgt
     2581 aaaaggaatt gttggggcaa cggctccaca tgcaacacca gcatcaatta catttccatc
     2641 tttgttcatt tggaaatgat aagccagtga aacaatagaa atttccattg attttctgga
     2701 tccaattttc tcaaaacctg atttaatatt atgagttgag ttttttggta tggtaatatt
     2761 tttaattact tcttttttag ttaaagaagt cttttttaag cccctgataa aagagctcaa
     2821 ttgttcttct ctttcgctac catcacaatc taaaataata catgtggctt tcaaagcaat
     2881 taaggctgct gtcatatcac cagacgggga tacattacaa atatttcctc ctactgtagc
     2941 cacatttcta atttgggttg atgcaagttt acttgccgct tgatgtagta cagggaaatt
     3001 ttcttcaatt atcttgtcat caacaatttc agttgcagtt actaatgctc ctatttgaat
     3061 attattctca ttctcaacta tttgtttaaa atttggttca tctaattgag ctaaatttat
     3121 taatatcaaa tctttggttt gtatagattt tatctgatgg ataagatctg taaatccagc
     3181 actaattcga aaattattag cttgattgtc agcaattaca ctcaataact caggagtact
     3241 tttagggctt attacatcaa attccatttc tttttttata tcacgattaa ttattacttt
     3301 gtattttcac ttaaagctct caacactttt tctgctgtaa ttggaagtga atcaaaccga
     3361 ataccaattg catttgaaac agcattagca atagccgcag cggttgggat caaaggagct
     3421 tcacctgcgc cttttgatcc ataagggcca gcttcatcgt aagattcaat tggataaaaa
     3481 tgaacatttg gcatatctgt tgttgtcaac aatttatagc catgaaagct ggggttcatt
     3541 aggataccat tttcataaat catttcttca gtaagtgcat agcctatacc tatagcaact
     3601 ccaccttcta tttggccttg taggccaatc gggttaagta ctctcccaac atcttgagag
     3661 acatgaacat taagtacatt aacatttcct gttactgtat ccacctcaac ttcaattgct
     3721 tgagtagcaa aagcataatt tcctgaaaca tcacctttaa aatctttgtc ttgaaaacga
     3781 cttggtggct cataaaaata atttaccgta caaagttcat gtggtgatcc gaaatgtatc
     3841 tcacgagcaa ccttatcgac ttttatctcg aattcgttga atagcatcat tccatcttga
     3901 tatacccaat cctctgttac aacatttagt aattctgatg cctttttatt taattttccc
     3961 tttaaaagtt taattgcccc taataatgaa ttacctgcga caaagcttgt tcttgatgca
     4021 tgaacaccaa catcccaagg cttaacatct gtatcagtat taattacctt tatcttttca
     4081 attgggattc ctaattcctc aatcgctatc attgctaata cggtttcaga accctgtcca
     4141 atttcacttg aaccagtaat aatagtcaga taaccatagt cgtctaattt taatgttgtt
     4201 ccgcaaccat cagatcgata aattttcgct cctcctccaa cgtgtaacat tgaacctaaa
     4261 cctatccctc tacgatatct tccttttttt gattcattat aaatttgatc aaactgactt
     4321 tttttaatga cagtttccaa tgcaggaatt gctccacaag ttttaaaatg taatccctga
     4381 ccagttactt ctcctttata atttgcgtta attaatctta tttctgcttt gtccatacct
     4441 aattcttcag ccattaggtc aatgttaatc tcaattgaaa aggtggcttg aggatttcca
     4501 tatcctctaa acgacccagc aaatggatta ttagtataaa ctgcttgtga atcaaatttg
     4561 catgctggca cctgataaag agaagaaaag gcctgcatca taacgaaggg cgtagtggct
     4621 ccccacgaag ta
//
LOCUS       DASCQP010000439         3797 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001616671, whole genome shotgun sequence.
ACCESSION   DASCQP010000439 DASCQP010000000
VERSION     DASCQP010000439.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3797)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3797)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3797
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001616671"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..635)
                     /gene="fabG"
                     /locus_tag="QF480_07560"
     CDS             complement(<1..635)
                     /gene="fabG"
                     /locus_tag="QF480_07560"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010536417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HJN06457.1"
                     /translation="MNLLEGKTALITGASRGIGKAIAMKFASEGANIAFTDLNYDDNM
                     EATEAELKALGVKAKGYASNAASFEDAEKLIETVVSDFERIDILVNNAGITRDNLLMR
                     MQEKDWDMVITVNLKSAFNLTKAVQRIMMKQRIGSIINMSSVVGVNGNAGQSNYSASK
                     AGMIGFTKSIAQELGSRNIRCNAIAPGFIETEMTQKLSDEVREEWVKTIPL"
     gene            968..1210
                     /locus_tag="QF480_07565"
     CDS             968..1210
                     /locus_tag="QF480_07565"
                     /inference="COORDINATES: protein motif:HMM:NF013691.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HJN06458.1"
                     /translation="MYFVYVLKNGINNNLYKGITKNLERRLYEHNLGKHKSTKPFRPW
                     VLAYQEEFDTLKEARKRELFFKSGIGREYLKRLLDS"
     gene            1201..1273
                     /locus_tag="QF480_07570"
     tRNA            1201..1273
                     /locus_tag="QF480_07570"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1234..1236,aa:Arg,seq:acg)
     gene            1722..2336
                     /locus_tag="QF480_07575"
     CDS             1722..2336
                     /locus_tag="QF480_07575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06459.1"
                     /translation="MNPRTTTKNMILVICSLRNHANYLLNNGKEYQDLLNYLFSLDFF
                     WDEDKPYPAVKDICAATGLTNGKLKRLTGLIFKDLITENDDLKLKIDKVEYVFTLSYF
                     DRYISFSVDNLPQLPRIGESFEVPYFYQYIGCRMFHVESIYHDFYDCTQYITIRLKSG
                     SYNKYWHIRKDEAECKREVSLHDLYKIDDWDLQKKLGVIPKGLY"
     gene            2467..2883
                     /locus_tag="QF480_07580"
     CDS             2467..2883
                     /locus_tag="QF480_07580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06460.1"
                     /translation="MTAQAGEILNYNGVEHHIATEPLREYLATRKDLHFFWVHTACWR
                     GYNGKWEIIDKKLFLTDLKAYINDQGEVDLQYVFPGQDKVFAEWFTGEIRLPLGDRLK
                     YVHMGYESINEADYFLKFKNGVLLGERMVDNSEEFK"
     gene            complement(2876..3055)
                     /locus_tag="QF480_07585"
     CDS             complement(2876..3055)
                     /locus_tag="QF480_07585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06461.1"
                     /translation="MKSSLFAETIQGSAPHEWIHYTVKTKKELRQVKNMQLEHFWIIV
                     AVSFKAVMSNIPFFI"
     gene            3112..3573
                     /locus_tag="QF480_07590"
     CDS             3112..3573
                     /locus_tag="QF480_07590"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN06462.1"
                     /translation="MARKKSATSINELGIYYNYILSTCEVQSVCDYLENSVGAVEIHN
                     NATGCNTQVEVEVACEPVSITEINFSDNVIISPNPLSTSTTIEFEILQPSKVTFSIFN
                     HIGEQVKVIQKKSNSGNQQIVWNAQGLASGMYYFRLRVGEHVAHGKIVVAR"
BASE COUNT         1310 a          636 c          639 g         1212 t
ORIGIN      
        1 ctcagaggaa ttgttttaac ccactcttcg cgaacctcat cacttaattt ttgagtcatt
       61 tcagtttcta taaatccagg tgcgattgca ttacaacgaa tatttcgcga acccaattcc
      121 tgagcaattg attttgtaaa ccctatcatg cctgcttttg atgctgaata atttgattgt
      181 ccggcatttc cgtttacacc tacaacagaa ctcatgttta taattgagcc tattctttgt
      241 ttcatcataa tgcgttgaac agctttcgtt agattaaaag ctgattttaa attaacagta
      301 ataaccatat cccaatcctt ttcctgcatt cgcattaaca ggttatctct ggtaatacca
      361 gcattattta ctagaatatc aattctctca aaatcagaca caactgtctc aatcagtttt
      421 tcggcatctt cgaaggatgc agcattagat gcatatcctt tcgctttaac accaagcgct
      481 ttgagttcag cttctgtagc ttccatgttg tcatcataat taagatcggt gaacgcaata
      541 ttggcacctt cgctggcaaa cttcatagca attgcttttc ctattcctct tgaagcacct
      601 gtaattaaag cagtttttcc ttctaataag ttcattttaa ttatattgtt ttagttcggg
      661 ccaaagatat aaattaaata tctttcaaag tgagaacaaa taaatcaaca attaacataa
      721 taacaatctc tattattgct agttatttca aattcaatta gcaattacaa attaattaga
      781 ctttgaaaaa tattgtatct ttgcactcct aaaatttcag gaatcatagc ctgtttgttg
      841 aggcggcata atagatactt gaagttagta caacatagat tggactcgta gcctgtctgc
      901 cgacaggcag gcataatgga tacctgccgg caggcagggt gcaccgagat caggaataga
      961 attgaaaatg tattttgttt acgttcttaa aaatggcatt aacaataacc tttacaaagg
     1021 tataacaaaa aacctcgaaa ggcgattgta tgagcataac ttgggaaagc ataaatcaac
     1081 aaaaccattt agaccatggg ttttggctta ccaagaagaa tttgatactc ttaaagaagc
     1141 aagaaagaga gaattgtttt tcaaatctgg aattggaaga gagtatttaa aaagattatt
     1201 ggactcgtag cataatggat agtgcacctg actacggatc aggaggttgc aggttcgaat
     1261 cctgccgggt tcacagatga ataaaagcct gaccatatta atggccgggc ttttttgttc
     1321 agacagattc aaacttgttt gaaatctgga ggaaacaaaa aataccaagg ccgcgttagc
     1381 ggacaggctt cattctcaaa atggaagtca aaaggatcat aaaataatcc tgccgggttc
     1441 acttgattat caaaaggtta tgactataaa aagttgtaac ctttttatat gtactaacag
     1501 atgtactagc aaactaatat ataactttct agttccgaat taatctgttg accatccaca
     1561 agccccgaca attctagaag aacagctacg attaatagtt acattactgt taaaacaatt
     1621 ccaagttgat agaaattgag tcctcctaac gcctcattgc aataactacc atctttattg
     1681 atttttaacc tttaaattag cgagtaaaaa cactattcac tatgaatcca agaactacaa
     1741 caaaaaacat gattttagtc atttgctcct taagaaatca tgcaaactat ttattaaata
     1801 atggcaaaga atatcaagat ttacttaatt atctcttctc tcttgatttt ttctgggatg
     1861 aagataagcc atacccagca gtaaaggata tatgtgctgc tacaggtctt acaaatggaa
     1921 agctgaaacg attaacagga ctcatcttta aagacctaat aacagagaat gatgatctga
     1981 aacttaaaat tgataaagtt gagtatgttt ttactttaag ctattttgac cgttacatca
     2041 gttttagtgt tgataaccta ccacagttac ctagaattgg tgaaagcttt gaagtaccat
     2101 atttctatca atacattggt tgccgaatgt tccatgtaga atccatctat catgattttt
     2161 atgattgcac tcaatacata actattagac taaaaagcgg ctcttacaac aaatattggc
     2221 atataaggaa ggatgaggct gaatgcaaaa gagaggtatc actacatgac ctttacaaaa
     2281 tagatgattg ggatttacaa aagaagttag gagttattcc taaagggttg tattgattaa
     2341 ttgtcattct aattattctt ttattgctag ataaatattg attatttaat ttcgtatatt
     2401 tgagggtatt ataactcatt aaccgatcta attgtttctt taaccaaaat aaataactaa
     2461 gataatatga cggcacaagc tggagaaata cttaactaca atggagtaga acatcacata
     2521 gcaacagagc cacttagaga atatttagca acaaggaaag atttacattt tttttgggtt
     2581 cacactgcat gttggcgtgg ttacaatgga aaatgggaaa ttatagataa aaaactattc
     2641 ctgactgacc taaaggcata tataaacgat caaggagaag tcgatttaca atacgtattt
     2701 cctggacaag acaaagtatt tgccgagtgg tttactggag aaattagatt accattaggc
     2761 gatagactca aatatgttca tatgggatat gagtccatca atgaagcgga ttactttctt
     2821 aaatttaaga atggagttct tctaggagag cgtatggttg ataatagtga agagtttaaa
     2881 taaaaaaagg gatgttgctc ataacagctt taaacgacac agctacaatt atccagaaat
     2941 gctctaattg catgttctta acctgcctca gttccttttt tgttttcaca gtataatgta
     3001 tccactcatg tggagcacta ccctgtatag tttcagcaaa aagtgaactt ttcacgagtc
     3061 aaatttaaga tatatatttt ataattttat taatcttaaa aagtaaagaa aatggctagg
     3121 aagaaaagtg caacttcaat taatgaacta ggaatttatt ataattatat tttatccaca
     3181 tgtgaagtac aaagtgtatg tgattattta gaaaactcag ttggagctgt tgaaatacat
     3241 aataatgcca caggatgcaa cactcaagtt gaagtggaag tagcttgcga gccagtttca
     3301 ataactgaaa taaacttttc agataatgtt attatatctc ccaatccact ttctacatca
     3361 acaactattg agtttgaaat attgcaacct tcgaaagtca cattctctat tttcaatcat
     3421 attggtgaac aggttaaagt aatccaaaaa aagtcaaatt caggcaatca acagatagta
     3481 tggaatgctc aaggattagc ttcaggaatg tattatttcc ggttgcgagt tggtgaacat
     3541 gtagcccacg ggaaaattgt tgttgccaga tagtaaacac cttcacacat attattatat
     3601 tttgcactta tactaagtgt taattatcaa tattaattca tctataagat ccttctcctc
     3661 aaccctttaa aaacttcttt aaaatatttt caataaagtc ttgttgaatt aaaaaagtag
     3721 tttacttttg ccggctgcaa aaagagatat tgttcattta caaggcagtt aaagggtaaa
     3781 agataggaga ggaattg
//
LOCUS       DASCQP010000440         2157 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001618007, whole genome shotgun sequence.
ACCESSION   DASCQP010000440 DASCQP010000000
VERSION     DASCQP010000440.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2157)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2157)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2157
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001618007"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(224..2143)
                     /gene="yidC"
                     /locus_tag="QF480_07595"
     CDS             complement(224..2143)
                     /gene="yidC"
                     /locus_tag="QF480_07595"
                     /inference="COORDINATES: protein motif:HMM:NF002356.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032977 - membrane insertase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HJN06463.1"
                     /translation="MNRNSIIGFILIAGIMIGYTYWMAPSEEELAKQQRQADSIARIQ
                     RHNEEVLAKSTKILEQATQPETPEEQITEVTSETYSELKSKYELFANAAQGDEQLYII
                     ENDLVKLEISNKGGYVKTVELKKYKTYDSLPVILFNPETTRFGLSFFSINNRSINTRD
                     LYFTPSENISKNMVVSGNNSLSFSMRLYTDTGEGVVNPNSYIEYLYKISGDNYMFDFT
                     INVVGMDGVISSNSNYADLNWFADLRQQEKTIDQFNGSTIYYKFFQDEVDYMSETDDD
                     EEQITTKLKWVSFKQRFFSSTIVAKNSFNNGKLTVFEKENPGSDRYLKSMEADFELPI
                     NLRGETSIPFSFYYGPNKFYTLKAYDVDLERQIPIGWGFFILAWINEYIVIPTFDWLG
                     GYGWNYGIVILVLTIMLKTLLFPIAYKTYYSSAKMRVLKPEVDELSKKFPKKEDAMKK
                     QQAVMALYKKAGANPAAGCVPMLLQMPILFAMFRFFPASIELRQQPFLWAHDLSSYDS
                     IASLPFDIPFYGDHVSLFTLLMTVSTIMYTYLNNQMMASQTTQMPGMKTMMYLMPIMF
                     LGIFNSYASGLSYYYFLANVITFGQMFVFRYAINENKLRAQIERNKKKPPKKKSAFQK
                     RLEEAAKQKGSNKKR"
BASE COUNT          660 a          371 c          368 g          758 t
ORIGIN      
        1 tgttgtttgt aagtccagta atggttttat ctttattaaa aataacaaca tttggtatag
       61 gattaccagt ttgctgatcg taaacaaaaa tgttttggga tattgtctca gtagcaatga
      121 tgatcatcaa aaaaactagg gtagagaatt tacttaagtt cattatttta aatgtaatat
      181 atctagtttt ttgagaatat agcgcttaga attatttaaa aacttaacgt tttttattgg
      241 agcccttttg ttttgcagct tcttcaagtc ttttctggaa agctgatttt ttctttggtg
      301 gtttcttttt atttctttca atctgggcac gtaatttgtt ttcatttatt gcatatctga
      361 aaacaaacat ctgaccaaaa gtaattacat tggcaagaaa ataataatag ctcaagcctg
      421 aagcataact gttaaaaata ccaaggaaca tgataggcat aagatacatc atggtcttca
      481 tacctggcat ttgtgttgtt tgagatgcca tcatttgatt attcagatag gtgtacatta
      541 ttgttgaaac agtcattaat aatgtaaaaa ggctaacatg atctccataa aatggaatat
      601 caaacggcag actcgcaatc gaatcataac ttgataggtc gtgggcccat aaaaatggct
      661 gttggcgcag ctctattgaa gcaggaaaga acctgaacat agcaaaaagt ataggcatct
      721 ggagaagcat cggcacacat ccagctgcag ggttggcacc tgccttttta tacaaagcca
      781 tcactgcctg ttgctttttc attgcatctt ccttcttggg aaatttttta gatagctcgt
      841 caacctcagg ttttaatacc ctcatcttag ccgatgaata ataggttttg tacgcgattg
      901 ggaaaagtaa cgttttcaac ataatagtca atacgagaat aacaataccg taattccacc
      961 cataacctcc aagccaatcg aatgttggta tcacaatata ttcatttatc catgcaagaa
     1021 taaaaaatcc ccagccaatt ggtatttgcc tttcaagatc tacatcgtat gcttttagtg
     1081 tataaaattt atttggtccg taataaaaag aaaatggtat gctagtttca cctcttaggt
     1141 ttatgggaag ctcaaagtcg gcttccattg atttaaggta tctgtcagaa ccgggatttt
     1201 ccttttcaaa tactgtaagt ttgccgttgt taaacgaatt tttagcaact attgtagagg
     1261 aaaagaatcg ctgtttaaat gaaacccatt ttaacttggt agttatctgt tcttcatcgt
     1321 catcagtttc tgacatgtaa tcaacttcat cctgaaagaa tttgtagtaa atggttgatc
     1381 cattgaattg gtcgattgtt ttttcctgtt gacgtaagtc ggcaaaccag tttaaatcag
     1441 cataattcga atttgaagaa ataaccccat ccattccaac aacgttgatt gtgaaatcaa
     1501 acatgtagtt gtcgccacta attttataca ggtactcaat atagctattt ggattaacaa
     1561 ctccttctcc tgtatcagta tacaaccgca tactgaatga aagggagttg tttccagaaa
     1621 caaccatgtt ttttgatata ttttcactag gagtaaaata tagatccctc gtatttattg
     1681 atctattatt tattgaaaaa aacgataatc caaatctggt agtttcagga ttgaataata
     1741 ttacagggag tgaatcatag gtcttatatt tttttaactc aactgtttta acatatccac
     1801 ccttattact tatttccaac ttaaccagat cgttttcaat aatatataat tgctcatcac
     1861 cttgagcagc atttgcaaat agttcatatt tacttttaag ttcagagtac gtttcagatg
     1921 taacttcagt tatctgttct tccggagttt cgggttgagt tgcctgttct aatattttgg
     1981 ttgactttgc gagaacttct tcattatgcc tttggatccg tgctatggaa tctgcttggc
     2041 gttgctgttt tgcaagctcc tcttcagagg gtgccatcca atatgtataa ccaatcatta
     2101 ttcctgctat gaggataaaa ccaataattg agtttctatt catatgattt tatttat
//
LOCUS       DASCQP010000441         4242 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001618136, whole genome shotgun sequence.
ACCESSION   DASCQP010000441 DASCQP010000000
VERSION     DASCQP010000441.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4242)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4242)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4242
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001618136"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..205)
                     /locus_tag="QF480_07600"
     CDS             complement(<1..205)
                     /locus_tag="QF480_07600"
                     /inference="COORDINATES: protein motif:HMM:NF013227.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HJN06464.1"
                     /translation="MIKHNMVDLVGQYNKIKKEIDIAVLDIMSEASFINGPAVKEFQK
                     SFEEYLGIKHVIPCANGTDALQVA"
     gene            394..1152
                     /locus_tag="QF480_07605"
     CDS             394..1152
                     /locus_tag="QF480_07605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06465.1"
                     /translation="MLKRVLLFLLVLYTVSQINAQVNVSDSAVAAFIPHVSYSYQFSG
                     GDIASRYGDNSTIGGGLKYKTSKNFIFSFDGNFIFGSKIKNADSILWMVQTKDGFIID
                     GNGTYALYALYERGFNFNASFGKIFPVLNPNPNSGLMITAGFGYMVTRMKIDNQHRTA
                     PQISDDYAKGYDMLIGGISLNQFIGWFYMGNSRFTNIYAGFEFHQAFTHSLRDWDFST
                     MKKDNDKYIDFFIGLKIGWMLPIYKRAPNKYYYN"
     gene            1203..2450
                     /locus_tag="QF480_07610"
     CDS             1203..2450
                     /locus_tag="QF480_07610"
                     /inference="COORDINATES: protein motif:HMM:NF016311.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase N-terminal domain-containing
                     protein"
                     /protein_id="HJN06466.1"
                     /translation="MKILYKIFIFLYSATIGFASIFNNKARQWVDGRKNLLSRIKEDH
                     ISENQIIWVHCASLGEFEQGRPVIEMLRTTYPDHKITLTFFSPSGYEVRKDYEFADYI
                     YYLPLDTVKNAHRFISYVRPQLVIFVKYEFWFNYIDELYRQKIPLIFISVIFRESQHF
                     FKPWGAWFAKQLNKVTYIFVQNEESLELLDRISIHHAEVSGDTRFDRVIQLPNEPVSY
                     PIIEKFKGDSFLLIAGSTWQPDEKVLYDLLLNSKADFKLVVASHLINKDHIFDIQDRF
                     RNYDPVLYSKVVDINPEINRVLIIDSIGMLAQLYRYADIAYIGGGFGVGIHNLLEAST
                     YGIPVLFGPNYKRFREAIELRDNGGGYPIKTSEECLKVFEKLLQNKDAYGKSSSTAKN
                     YVHINAGATQLVINKAKEYIIAG"
     gene            2579..4015
                     /locus_tag="QF480_07615"
     CDS             2579..4015
                     /locus_tag="QF480_07615"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF013079.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HJN06467.1"
                     /translation="MDILIQEARRKSVVANSVALIKTNSDLDGLGLNDIEQKFVKKER
                     KGKNQIIEVNRFKNRTFIVYGDTKGAQNIKLESYRKAGNNTLLLLNNAKISRVVVNSI
                     NSTKEETLAFIEGLVLGNYQFLKYKTGDNKKKNSLSKIEIYSKDITTKDIEEFQIVID
                     AVCYARDYVNEPDSFMTAVQLSKEAQALGQSSGAKVEVFNKKKIETLKMGGLLAVNRG
                     SVEPPTFTIIEWKPKNSINSKPYIFVGKGVVYDTGGLSLKPSNFMDTMKSDMAGAAAV
                     AGTMYAIAKSKLPIYVVGLIPATDNRLDGNAYTPGDIVTMFDGSTVEVMNTDAEGRMI
                     LADALSYAKKYNPTLVIDIATLTGAAARAIGPQAMVGMKVKSDTEFDKLKQSGELVHE
                     RIVEFPMWDEYAEQLKSEVADRKNIGGMEAGAITAAKFLEHFTDYPYIHLDIASPSFL
                     NKFDSYRTVGGTGVGVRLLFNFIKSKVN"
BASE COUNT         1453 a          627 c          782 g         1380 t
ORIGIN      
        1 atgcaacttg aagagcatca gtgccatttg cacaaggtat tacatgtttt atgcccaaat
       61 attcttcaaa acttttttga aattccttaa cagcaggacc atttataaat gaagcttcag
      121 acattatgtc taaaacagca atgtctattt ctttctttat tttattgtac tgaccaacta
      181 agtcaaccat attgtgttta atcatatatt cttatgttat tgtactaact cgatgttgca
      241 aagatagata agttgcggaa agagtttgga gtttgagggt aaaagtttgg agtcggaagt
      301 tgaaccgtta ttaacaatga actcagacat atggcttaca ccttcaacta aaataattca
      361 cctatctttg cttcaaatcg atattataac gatatgctta aaagagtatt gctttttttg
      421 cttgttttat acaccgtttc acaaataaat gctcaggtaa atgtaagcga ttctgctgta
      481 gcagcattta ttcctcacgt ttcatattcc taccaatttt caggaggtga tattgctagt
      541 aggtatggcg ataattcaac aattggtgga ggattaaagt ataagacaag taaaaatttt
      601 attttctcat ttgatggcaa ttttatattt ggaagcaaaa ttaaaaatgc tgattcaatc
      661 ttatggatgg tacaaaccaa agatggtttt attatcgatg gaaatggtac ttatgctcta
      721 tatgctttgt acgaaagagg attcaatttt aatgctagtt ttgggaagat atttcctgta
      781 ctaaatccaa accctaattc tggattgatg ataacagctg gttttggtta tatggttact
      841 cgaatgaaaa ttgataatca gcatagaaca gcaccccaga tttcggatga ttatgcgaag
      901 ggttatgata tgcttattgg aggtatatct ttaaaccagt ttattggatg gttctatatg
      961 ggtaattcaa ggtttaccaa tatttatgct ggattcgagt ttcatcaggc cttcacccat
     1021 agccttcgtg attgggattt cagtaccatg aaaaaggata atgacaagta catcgatttc
     1081 tttataggat taaaaattgg ctggatgtta cctatttata agagagcacc taataagtac
     1141 tattataact aaatatgttt gtgattttta tttgtttcat aataaggaca aacatctgat
     1201 aaatgaaaat actctataaa atcttcattt ttctttattc agctacaatt ggatttgctt
     1261 caatttttaa caataaggcc agacaatggg ttgatggaag aaaaaaccta ttatcccgaa
     1321 ttaaagaaga tcatatttcc gaaaatcaaa ttatttgggt ccattgtgca agtcttggtg
     1381 agtttgagca aggtagaccg gtaatcgaaa tgttacggac aacatatcca gatcataaaa
     1441 tcacacttac ttttttttct ccttcgggtt atgaagtgcg taaagactac gaatttgcag
     1501 attatattta ttatctacct ctagatactg ttaaaaatgc acaccgcttt attagctatg
     1561 taaggccaca acttgtgata tttgttaagt atgagttttg gtttaattat atcgatgaat
     1621 tataccggca gaagatacca ttgattttca tttctgtaat tttcagagaa tcgcaacatt
     1681 tcttcaaacc atggggagcc tggtttgcca agcaattaaa caaggttacc tatatatttg
     1741 tacaaaatga agaatcatta gaattacttg acagaattag tattcaccat gctgaagtaa
     1801 gtggcgacac tcgttttgac agagtgattc aattgcctaa tgaacctgtt tcatatccta
     1861 taattgagaa atttaaagga gattcctttt tattgatagc gggaagtacc tggcaacctg
     1921 atgaaaaagt gttgtatgac ttgcttctta attctaaagc tgatttcaaa ctggttgtag
     1981 cttcacattt aataaacaag gatcatattt ttgatattca agatcgattt agaaattatg
     2041 atcccgtatt atattctaaa gtagttgata ttaatcctga gataaatcgt gtactgataa
     2101 ttgacagcat tggaatgtta gcacagcttt atagatatgc agatattgcc tatattggtg
     2161 gaggttttgg tgttgggata cataacctgc tggaagcctc cacatatgga atcccggtat
     2221 tattcggccc aaattataag cgtttccgtg aagctattga attaagagat aacggaggtg
     2281 gctacccaat caaaacttct gaagaatgtt taaaggtttt cgaaaaacta ttacaaaaca
     2341 aagatgcata tgggaaaagt tcttctactg ccaaaaatta tgtccatata aatgctggag
     2401 ctactcagct agtaataaat aaggcaaaag aatatattat agcagggtaa acattactaa
     2461 tttaatcaaa accataatta ttcttacaat tgattatata ataagttagt agtttaaaac
     2521 tagatttccc tattaatcac tattttgtat atttgacgag attaaaattc taaattgaat
     2581 ggatatattg atacaagaag cccgtagaaa atctgttgtt gcaaattcag ttgctctgat
     2641 taaaactaat tcagatcttg acggtttagg attgaacgac attgaacaga aatttgttaa
     2701 aaaagaacgt aaaggcaaaa atcaaataat agaagtaaac agatttaaaa accgaacttt
     2761 tattgtttat ggtgatacca agggggcaca aaatataaaa cttgagtcgt acagaaaagc
     2821 aggtaataat actcttctat tactaaataa cgcaaaaatt agcagagttg tagtaaactc
     2881 tattaattca accaaagagg aaacattagc ttttattgaa ggtctggtgc ttggcaatta
     2941 tcagttttta aaatataaaa ctggagataa taaaaagaaa aatagtctga gcaaaattga
     3001 aatttattca aaagatataa ctacaaagga tatagaagaa tttcaaattg tgatagatgc
     3061 ggtttgttat gcaagggatt atgtgaatga gccagattct tttatgacag ctgtccagct
     3121 atccaaagaa gcacaagctc ttggccaatc ttcaggtgct aaagtggaag tattcaacaa
     3181 aaagaagata gaaacactta aaatgggagg gttacttgct gtgaacaggg gaagtgttga
     3241 gccacctacc tttacaatta ttgaatggaa acccaaaaat agtattaata gcaaaccata
     3301 tatatttgtt ggtaaaggag ttgtttatga tacaggcgga ctaagcctta agccatctaa
     3361 ctttatggat actatgaaaa gtgatatggc aggcgccgct gctgttgctg gtacgatgta
     3421 tgctattgca aaatcaaaac tccctattta tgttgtagga ttaattccgg caactgataa
     3481 ccgacttgat ggaaatgcat acactccagg tgatatagtt actatgtttg atggatcaac
     3541 agtggaagta atgaatactg atgcagaagg acggatgata cttgccgacg cacttagtta
     3601 tgcaaaaaaa tacaatccta cattggtaat cgatattgct actttgacag gtgctgcggc
     3661 cagagcaatt ggtccacaag caatggtagg aatgaaagtt aagtctgata ctgagtttga
     3721 caaacttaaa caatcaggtg aacttgtgca cgaacgaatt gttgagtttc ctatgtggga
     3781 tgaatatgct gagcaattga aatcagaggt tgctgataga aaaaatattg gtgggatgga
     3841 agccggcgca atcacagctg ctaagtttct tgaacatttt actgattacc cttatataca
     3901 tcttgatata gcctcaccat catttttaaa taaatttgat agttatcgaa ctgttggcgg
     3961 aacaggtgtt ggagttagac tactatttaa tttcatcaaa tcaaaagtta attaacttta
     4021 acaattaact taggagtgta taaaaatcac cacaatgaac taaatgataa aactagtcat
     4081 taagttcgtc ctttcctaag agtatgaaaa agttgaaatt cattgaaaac agctaatttc
     4141 taagattgat ctggagaaat agtggctttg gtttcttact catattcata tcttatggta
     4201 agattagaaa ttattctgta tacctgaagt cgttaataat ca
//
LOCUS       DASCQP010000442         3198 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001618727, whole genome shotgun sequence.
ACCESSION   DASCQP010000442 DASCQP010000000
VERSION     DASCQP010000442.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3198)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3198)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3198
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001618727"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(22..621)
                     /locus_tag="QF480_07620"
     CDS             complement(22..621)
                     /locus_tag="QF480_07620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06468.1"
                     /translation="MKKNKIFLTGIFVVLISFSSMAQGGGIWSFNWNMGFPMGTTKDF
                     IGNPSFRGFSIEGRGFVTDQITVGGIGAWSVFYENLDWTLQEQNTTKTYGYKRRYLNV
                     MPLMVTAHYYFSQGQIQPYIGTGIGPYYIESRDFMGMYYVQGKEWHFGVAPEVGVIMP
                     FGSSNAGVNVNFKYNLAAKTKNQPSYSWLGINIGISYIF"
     gene            complement(647..1306)
                     /locus_tag="QF480_07625"
     CDS             complement(647..1306)
                     /locus_tag="QF480_07625"
                     /inference="COORDINATES: protein motif:HMM:NF024978.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4136 domain-containing protein"
                     /protein_id="HJN06469.1"
                     /translation="MLRKISSIKLLLVIILPSAILMLSSCYPDDSISPTETDIVVTNY
                     YDSVTFSNYSNYYMPDTILPLDTASIPKDQPKALILGTIATNMESMGYTRIDGSDTTI
                     TPHLVVIASSIITKNISVYYWYPYYGPGWGWGGWGYPGWGYPGYYPPVPYVTSYTTGT
                     LRIEMFNPSDIRVIDNDTIHPVYWMAGINGVLQGSNIDSRIKSTIDQAFKQSPELKTG
                     N"
     gene            complement(1399..2922)
                     /locus_tag="QF480_07630"
     CDS             complement(1399..2922)
                     /locus_tag="QF480_07630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06470.1"
                     /translation="MRKYSRQLRLVILLSGLIISTLSHGQLMNHYWSFNFNSQSSLLS
                     GAVVAGDGGNTSIFFNPATISEIKNGSNLSFAASLLTWGVYYFKDALGTDIDITNLYF
                     NVQPQFISYSYRPKDSKFALAFTFLTRMKERFDINYYNSREIDLISSSQGLENYNVAY
                     RYFLEYSDNWFGVAGSYDISEKFKIGASLFISAAYFSYRTSTTTIAFSTTDTLWVDGV
                     PNPALVSDAADIETFRFFDYRLIAKLGFTYVLDKWRFGLNFTTQSFSLFSTKKEAYRE
                     QRMSNITNQDTGEFMPGYVIVNGQTKRNLDARIKFPFSVSFGFIYEINSANNRLYFTM
                     EYFSHIKPYKMIDTPVREDITSDIIYDKLDNKDWLSIVDVARPVLNVAVGYRWELNKD
                     LMFLSGIRTDFNNIINANYKEYSDYNTVNTADINIYHLTGGVQFYFLKRYQLVAGGEF
                     SFGYDKNQRQIANFSDPVEYNAEDNRVLQGPLEDKMDVYFFGVNIYISATFRFGGNK"
     gene            complement(3009..>3198)
                     /locus_tag="QF480_07635"
     CDS             complement(3009..>3198)
                     /locus_tag="QF480_07635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HJN06471.1"
                     /translation="ASVLYKKGFKEIQFMVNAINDWMDKKNFNSIEEFRGKMSIKQSN
                     NPAAYERVQFMKYYSGIE"
BASE COUNT         1042 a          568 c          512 g         1076 t
ORIGIN      
        1 tcattttatg aagaataact tttagaatat gtaagaaatg ccaatattaa ttcctagcca
       61 tgaatatgaa ggttggtttt ttgttttagc agcgagattg tatttaaaat ttacattcac
      121 gccagcattg ctgctgccaa atggcattat aactccaact tcaggagcta cgccaaaatg
      181 ccattctttt ccttgaacat aatacatgcc cataaaatca cgtgattcta tataataagg
      241 accaatacca gttccgatat agggttgtat ttgtccttga gagaaatagt aatgtgctgt
      301 aaccatcaga ggcatcacat tcaaatatct ccttttgtaa ccatatgttt tagtagtatt
      361 ttgttcttga agtgtccaat cgagattttc ataaaaaacg ctccaggcgc caataccgcc
      421 aacggttatc tgatcggtaa caaaaccgcg tccttcaatt gagaaacccc taaatgatgg
      481 attaccaata aaatctttgg tagtccccat tgggaaaccc atattccagt tgaaactcca
      541 aattccacca ccttgtgcca tcgaagaaaa gctaataagt actacaaaaa ttcctgttaa
      601 aaatatctta ttttttttca tgagttagtt tgcttaagga ttaaaattaa tttccagttt
      661 ttagttcagg tgattgctta aaggcctgat cgattgtgct ttttattctt gagtcaatgt
      721 ttgatccctg aagcactccg tttattcctg ccatccaata cacagggtgg atagtatcat
      781 tatctatcac tctgatatct gaaggattaa acatttcaat tcgaagagtc cccgttgtat
      841 atgaggttac ataaggaacg ggtggataat atcctgggta gccccatcct gggtaacccc
      901 aacctcccca tccccaaccg ggaccgtaat atggatacca ataatataca ctaatatttt
      961 ttgtaataat acttgaagca attacaacca gatgaggagt aatggttgtg tcagatccgt
     1021 caatccgagt gtaccccatg ctttccatat tcgtagcaat tgtccccaaa atcaaagctt
     1081 tgggttggtc tttagggatt gaggctgtat caagtggtag aatggtgtca ggcatataat
     1141 aattactata attactaaag gtgacggaat cgtagtagtt tgttacaact atatctgttt
     1201 ccgttgggct aatgctgtca tcaggataac atgatgataa cattagaata gctgatggta
     1261 aaattattac cagcagtaat ttaatagatg aaatttttct caacataact atttttttga
     1321 aaaggttatt aaatgatttg ttttatagta caaatttata tcttttttgt tatatactat
     1381 tttagttaaa aatatcaatt atttatttcc accaaaccta aatgttgccg agatatatat
     1441 gttaacccca aaaaaatata catccatttt gtcttcaagt ggaccttgaa gcactctgtt
     1501 atcttcagca ttgtattcaa caggatctga gaaatttgca atctgtcttt ggtttttgtc
     1561 atatccaaat gagaactctc caccagccac caattgatat ctctttaaaa aataaaattg
     1621 aacaccacct gtgaggtgat atatatttat atcagcagta ttaaccgtat tataatctga
     1681 gtactctttg taatttgcat tgataatatt attgaaatcg gtacgaattc cacttaaaaa
     1741 cattaaatcc ttatttaatt cccatctgta tccaacagca acatttaata caggtctggc
     1801 aacatctact atagataacc aatccttatt atcgagcttg tcataaataa tgtctgatgt
     1861 aatatcttct cttacaggtg tatctatcat tttgtatggc ttaatgtgag aaaagtattc
     1921 cattgtaaaa tataaccggt tgttagcact attgatttca taaataaatc caaaagaaac
     1981 tgaaaaagga aattttattc ttgcgtcaag gtttctttta gtttggccat ttacgataac
     2041 ataaccgggc atgaattcgc ctgtatcttg gtttgtaata ttactcatcc tttgctcacg
     2101 atacgcttcc ttcttagttg aaaataacga gaacgattgc gttgtaaagt ttagcccgaa
     2161 tctccattta tctaatacgt aagtaaaccc aagtttggca attaatctgt aatcaaaaaa
     2221 tctgaatgtt tctatgtccg ctgcatcaga aacaagtgct ggattaggaa ctccatctac
     2281 ccacaaagtg tcagtagtag agaaagcaat tgtagttgtt gaagttcgat atgaaaaata
     2341 agcagctgaa ataaataagc ttgctccgat tttgaatttc tcagagatat catatgagcc
     2401 tgcgacacca aaccaattat ctgaatattc cagaaaatat ctgtaggcta cattatagtt
     2461 ttcgagacct tggctactac taattaaatc tatttcccgt gagttgtaat aatttatatc
     2521 aaaacgttcc ttcatccgtg ttaaaaaagt aaatgccaaa gcaaacttgc tatcttttgg
     2581 tcgataactg tatgatataa actggggttg aacattaaaa tagagatttg taatatctat
     2641 atcggtacct agcgcatctt taaaataata tactccccaa gttagtaatg aagcagcaaa
     2701 cgacaggtta gacccatttt ttatttcgga tatggttgca ggattaaaga aaattgatgt
     2761 attacctcca tcacctgcaa caacagctcc tgaaagtaat gatgattgtg aattgaaatt
     2821 aaacgaccaa tagtggttca ttaactggcc atgtgaaaga gtacttatga ttaatcctga
     2881 caaaagaata accaggcgta attgtcttga atactttctc ataagtagta attttttact
     2941 aaagtaaata aatttagtaa aaacctgaag tatcaatttc taataataac tcttaattaa
     3001 acaatgggtt attcaatacc ggaataatat ttcatgaatt gaacgcgttc ataagctgca
     3061 ggattatttg attgtttgat gctcattttt cctctgaact cttcaattga attaaaattc
     3121 tttttgtcca tccaatcgtt aattgcattc accatgaatt gtatttcttt aaatcccttt
     3181 ttgtatagta cagaagct
//
LOCUS       DASCQP010000443         2826 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001618920, whole genome shotgun sequence.
ACCESSION   DASCQP010000443 DASCQP010000000
VERSION     DASCQP010000443.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2826)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2826)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2826
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001618920"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            292..984
                     /locus_tag="QF480_07640"
     CDS             292..984
                     /locus_tag="QF480_07640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009134449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF554 domain-containing protein"
                     /protein_id="HJN06472.1"
                     /translation="MIGTIVNIIAIIIGSVIGLFINKRLPERFINMFFQVIGLFTLFL
                     GISMALETTHLLHMIMALILGAVMGEALQIQKGVERMSEFLKTRFNISGEKFSEGLLT
                     AFLLYCVGSLTILGAIEEGIGGNPKLLYIKSLMDGISSIALASGLGIGVAFSVVPLFI
                     YQGGLTLFASWFGDFIPEVMINELSAVGGILLIGLSINILNIKKIKVMNMLPALVMII
                     ILLWLFPEIRSY"
     gene            1166..1441
                     /locus_tag="QF480_07645"
     CDS             1166..1441
                     /locus_tag="QF480_07645"
                     /inference="COORDINATES: protein motif:HMM:NF014655.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adaptor ClpS"
                     /protein_id="HJN06473.1"
                     /translation="MGTKEKTSATPELDESLESIKNLILFNDDFNSFDFIIQSLVEVC
                     KHDLMQAENCAFIAHYNGKCQVKKGTINILRPIYVEMVNRQITVEIV"
     gene            1460..1927
                     /locus_tag="QF480_07650"
     CDS             1460..1927
                     /locus_tag="QF480_07650"
                     /inference="COORDINATES: protein motif:HMM:NF014062.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HJN06474.1"
                     /translation="MWTVIVILILVGLLLMILEVFVIPGSGVVGIVGLASMVVGIWLA
                     YSKQGIEAGHITLGVTLAVNVIGLGFALRSKTWKRAMLKTVNSGKVNEIKTGELKVGE
                     VGITISRCAPMGKAEFNNTYYEVSTLSEFIDQEKEIEIIRISGNKIYVKKTNN"
     gene            1930..>2826
                     /gene="floA"
                     /locus_tag="QF480_07655"
     CDS             1930..>2826
                     /gene="floA"
                     /locus_tag="QF480_07655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018338266.1"
                     /note="flotillin-like protein involved in membrane lipid
                     rafts; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flotillin-like protein FloA"
                     /protein_id="HJN06475.1"
                     /translation="MEQEIFVLIGIGIGSIFLLWILFYFVPVGLWFTALVSNVRISLI
                     QLVLMRWRKVPPRIIVNSLITSTKAGLRLKRDDLEAHYLAGGHVQGVVNSLISADKAN
                     IELDFKTATAIDLAGRDVLEAVQMSVNPKVIDTKKVAAVAKDGIQLIAMARVTVRANI
                     DQLVGGAGEETVLARVGEGIVSSIGSADSHKAVLENPDSISKVVLAKGLDSGTAFEIL
                     SIDIADIDIGKNIGAELQMDQANADKNIAQAKAEEKRAMAVATEQQMKAKAQEARANV
                     IQAEAEIPKAIAEAFRSGNLGIM"
BASE COUNT          904 a          386 c          580 g          956 t
ORIGIN      
        1 tcctttttaa atcactaatt agtgaagttg cacttttctt cctagccatt ttctttactt
       61 tttaagatta ataaaattat aaaatatata tcttaaattt gactcgtgaa aagttcactt
      121 tttgctgaaa ctatacaatt attaagttgt taggatatga cattgttaat ttcattatgg
      181 aagtaaattt agcaaatttc aacaaatcca gttgaatgtt aatgatcaga tccctatctt
      241 tggcttaccg acataagcct gtattaaaat taatatatta gcaattaatt tatgatagga
      301 acaattgtaa acataattgc aataattatt ggaagcgtta tcggattatt tattaataag
      361 cgcttgcctg aaagatttat caacatgttt tttcaagtga ttggattatt tactctattt
      421 ttaggtattt cgatggcact tgaaacaacg catttgctgc atatgataat ggctttaatt
      481 ttaggggctg ttatgggtga agcacttcaa attcaaaaag gtgttgaacg gatgagcgaa
      541 tttcttaaaa ctaggtttaa tatcagtggt gaaaaatttt cagaaggttt gttaacggca
      601 tttttactat actgcgttgg ctcacttacg atattaggtg caatagaaga aggtattggc
      661 ggaaacccga agttgttata tatcaaatca ttgatggatg ggatttcgtc aatagcttta
      721 gcctctggtt tgggaattgg agtggccttc tctgtagtac cattgtttat ttaccagggc
      781 ggtttaaccc tatttgcttc ttggtttggt gattttattc ctgaagtaat gattaatgaa
      841 ttgtcggctg tgggtggtat attgttgatt gggctaagta ttaatattct taacattaag
      901 aaaattaagg ttatgaatat gttgccagca cttgttatga taattatatt gctgtggctt
      961 tttccagaga tacgttccta ttagaggatt tgaaacaatc ttttatttca ataaatattc
     1021 attcaatttg gtttttgttg ttaaagtact aatttagttt aattaatttt aaactggata
     1081 tttattaatt atagtaagtg ttttagtaat gttgaactaa aattaatact aactttgtct
     1141 cgatattgca atagtagaaa gataaatggg aactaaagag aaaacatcgg ctactcccga
     1201 gttggatgaa agtttagaaa gcatcaaaaa cctcattctt tttaatgacg actttaactc
     1261 tttcgatttc ataattcaat ctttagtaga agtttgtaaa catgacctaa tgcaggccga
     1321 aaattgcgca tttatagctc attacaatgg aaaatgtcaa gttaaaaaag gaacaatcaa
     1381 cattctaagg ccaatatacg ttgaaatggt aaacaggcaa attacagttg aaatagtata
     1441 attatttaaa tttgtaacta tgtggacggt aatagtaata ttaatacttg tgggcttact
     1501 tttgatgatt cttgaggtct tcgtaattcc aggttctggg gtggtaggta tcgttggatt
     1561 agcttcaatg gttgttggta tttggcttgc atattcaaag caaggaatag aagctggtca
     1621 catcacactt ggcgttactt tagctgtaaa tgtgattgga ttgggttttg cactaagatc
     1681 gaaaacatgg aaaagggcaa tgctgaaaac tgttaactcc ggtaaagtaa atgaaattaa
     1741 aaccggagaa cttaaagtag gggaggttgg cattaccata tcaaggtgtg cacctatggg
     1801 taaagctgag ttcaataata catattacga agtaagtact ttgtctgaat ttattgatca
     1861 agagaaggaa attgaaataa ttagaatttc aggaaataaa atttatgtaa aaaaaactaa
     1921 taattaatca tggaacaaga aatttttgta cttataggaa tcggtattgg atcaatattt
     1981 ttgctctgga tactttttta ttttgtgcca gtaggcttat ggtttacagc actagtgtct
     2041 aatgtaagga tttcactgat acagcttgta ctgatgaggt ggagaaaagt accacctcgt
     2101 attattgtaa atagtttaat tacttctaca aaagcaggtc ttaggttaaa acgggatgat
     2161 ttagaggcac attaccttgc cggtggtcat gttcagggag tggttaattc cctgatttct
     2221 gctgacaaag ctaatattga gcttgatttc aaaacagcca cagcaattga ccttgcagga
     2281 cgtgatgtcc ttgaagctgt gcaaatgtcg gtaaatccta aagttattga tactaagaaa
     2341 gtcgctgctg ttgcaaaaga tggaattcag ctgattgcta tggctagagt tactgtaaga
     2401 gctaacattg atcaacttgt agggggagca ggtgaagaaa cggtacttgc ccgagtgggt
     2461 gaaggaattg tgtcgtcaat tggatctgct gattctcata aggcagtatt ggaaaaccct
     2521 gacagcattt ctaaagttgt acttgctaaa ggacttgatt ctggaacggc ttttgaaatc
     2581 ctttcaattg atattgccga tattgatatt ggaaagaata ttggtgctga acttcagatg
     2641 gatcaagcta atgctgataa aaatattgca caggcaaaag ctgaagaaaa aagagcaatg
     2701 gctgttgcta ccgagcaaca aatgaaagct aaggctcagg aagcacgtgc taatgtgatt
     2761 caggctgaag cagaaatccc gaaagcaatt gcggaagctt tccgctctgg taatcttggt
     2821 attatg
//
LOCUS       DASCQP010000444         2399 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001620985, whole genome shotgun sequence.
ACCESSION   DASCQP010000444 DASCQP010000000
VERSION     DASCQP010000444.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2399)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2399)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2399
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001620985"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..610
                     /locus_tag="QF480_07660"
     CDS             <1..610
                     /locus_tag="QF480_07660"
                     /inference="COORDINATES: protein motif:HMM:NF016648.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FecR domain-containing protein"
                     /protein_id="HJN06476.1"
                     /translation="TVLPDGSNVTMNKGANIDYPERFTSDTRNINFTGEAFFDVVRDP
                     EKPMIIASDNVRVKVLGTSFNLCNYNNSDEITVYLESGKILFYSVDEDDGSIMEQIIL
                     YPEQKGIYNKNTGLITKHNFSDRNHLAWKTGALEFVKAPMPDVIQVLEKTYKVEINSQ
                     ISLLDNLLTARFNNETPESIFESLQIIYGFNYEINDNSIMIY"
     gene            849..2096
                     /locus_tag="QF480_07665"
     CDS             849..2096
                     /locus_tag="QF480_07665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06477.1"
                     /translation="MSVFSLLLYMLIVQPVVAQSKDNINFNIVDEKLSSALFRLAYVA
                     DMNFTYDAGDSLFNTKLNYNATNKQPQVILEEILSSANLTYKQVGNQVVIYRTKINSP
                     NPVLQENNIEESKINDEVAIVETDNRISFEVIPDTIFISDTIVELQTDTIHITDTVFV
                     EKEKSQKQQTQKLKEIPVDYFNPMASRENRWSAEIFFAPIASSFSLVRETNSFSIRNF
                     SLGIEASKILYKWNISGGIKLTHFVEKFNHTYSTTDGGFFVTDTIDEYYTVFQTDTTW
                     YYVTDSTWKPIDNHEYSYNINNRIGYLEFVLSVSYDYYTNRKLRLYAKAGLQAGALIY
                     SSGLAIPDVNEPAGVDFADLNFSSMSYSILAGVGLKYRISEYIDFNSELYYFRNFNEV
                     VIDYPVNKKISGVGLKFGLIYYF"
     gene            2197..>2399
                     /locus_tag="QF480_07670"
     CDS             2197..>2399
                     /locus_tag="QF480_07670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06478.1"
                     /translation="MLLIVVALQSTSETIFVGGVMEESQTWTSDNTYIVYQDLIISGG
                     VILSIKEGVVVKIDNALGIIVTNG"
BASE COUNT          795 a          350 c          427 g          827 t
ORIGIN      
        1 aactgtcctt cctgatggtt ctaatgttac tatgaataaa ggagctaaca ttgattatcc
       61 ggagcgtttt acttctgata ctcgtaacat taattttact ggagaggcct tttttgatgt
      121 tgttagagat cccgaaaaac cgatgataat tgcgtcagat aatgtgaggg ttaaggtact
      181 gggtacatca tttaatctat gtaattataa taattctgat gaaattactg tgtatctcga
      241 atcaggaaaa atactgtttt attcagttga tgaggatgat ggcagtatta tggaacaaat
      301 tattttgtat ccggaacaga aaggtatata caataaaaat acaggattaa taacgaaaca
      361 taatttttct gacagaaatc atttagcctg gaaaacaggt gctttagaat ttgttaaggc
      421 gccaatgcca gatgtaattc aagtacttga aaaaacatat aaggtagaaa ttaattccca
      481 aatttcatta ttggataatt tgctgaccgc aagatttaat aacgaaactc ctgaaagtat
      541 tttcgagtca ttacagatca tttatggttt caattatgag attaatgaca attctataat
      601 gatctattag agttattcca tttcactagt tttcctcttc tattcttgat tcaccaacct
      661 atctcaaaaa aaagatactc gtcttcacga aagttttttt taatttagcc aataaatgtc
      721 attatagaaa cagtaggggt ttcatccctc agatttctta ttcgttccaa ttaataagat
      781 ttgtatagaa ccaaaatttt cgtttgctgg aaaacaaatt tatatcaagg tgttgtagag
      841 taggctgttt gtcagtattc agtttgttac tgtatatgtt gattgtgcaa cctgtagtgg
      901 cacaatcaaa ggataacata aattttaaca ttgttgatga gaagctttct tctgcattat
      961 ttcgactcgc gtatgtggct gatatgaact tcacttatga tgctggcgat agtttgttta
     1021 acacaaaact aaactataat gctactaata agcaacccca agtaattctt gaagaaatac
     1081 tttccagtgc gaacttaaca tataagcaag taggaaatca ggtagttatt tataggacca
     1141 agattaattc tcctaatccg gttttgcaag aaaataatat agaagaaagc aaaattaatg
     1201 atgaggtagc aattgtagag actgataata ggatttcttt tgaagtaatc cctgatacaa
     1261 tttttatctc agatacaatt gttgaactac aaactgatac aattcatatt acagatactg
     1321 tttttgttga aaaggaaaaa tcccaaaagc agcaaacaca aaaacttaaa gagattcctg
     1381 tagattattt caaccctatg gcttcgcgtg agaatcgatg gtcagcagag atttttttcg
     1441 ctcccattgc atcaagtttt tctcttgtaa gggaaactaa ttctttttcg atacgtaatt
     1501 tttcgcttgg tatagaagcc agtaaaattt tatacaaatg gaatatttca ggagggataa
     1561 aattgactca ctttgttgaa aagtttaatc atacttatag tactactgat ggtggctttt
     1621 ttgtaacaga tactatcgac gaatattata cagttttcca aacagatact acctggtatt
     1681 atgtaactga ttcaacctgg aaaccaatcg acaatcatga atacagttat aatatcaata
     1741 ataggatcgg ataccttgaa tttgttttat cagtatcgta cgattattat actaatcgca
     1801 aactgaggtt gtatgcaaaa gcaggtttac aggctggtgc tttaatatat agtagcggtt
     1861 tagcaattcc agatgttaac gaacctgccg gagttgattt cgccgatctt aatttcagct
     1921 ccatgtcata ttctattttg gcgggtgtcg ggttaaaata tcgaatcagt gaatatattg
     1981 attttaattc tgaactatat tattttagaa attttaatga agtagtaatt gattatcctg
     2041 taaataaaaa aattagtggc gttggcctta aatttggcct gatctactat ttttaattaa
     2101 aatgtaataa ccattatgat ggttttttct ttgatagata aacttatcag aaacattgtt
     2161 tctcgagtac ttatgaatgc caaatttgga gtttctatgt tactcattgt tgtggcttta
     2221 cagtccactt ctgaaacaat atttgtggga ggagtaatgg aggaaagtca aacatggaca
     2281 agtgacaata cctatattgt ttaccaggat ctgattattt cgggtggtgt aatactatca
     2341 attaaagagg gtgttgtggt taaaattgac aacgccttgg gtataattgt aacaaatgg
//
LOCUS       DASCQP010000445         1982 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001621943, whole genome shotgun sequence.
ACCESSION   DASCQP010000445 DASCQP010000000
VERSION     DASCQP010000445.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1982)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1982)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1982
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001621943"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..820)
                     /locus_tag="QF480_07675"
     CDS             complement(<1..820)
                     /locus_tag="QF480_07675"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HJN06479.1"
                     /translation="MHNKLNILFICNKSPWPPHEGGPIAMNNLIEGVVAAGHKVKVLA
                     INTNKYNVDISDIPEDYKKQTNIELVYIDLSLKPIPAFLNLFTGKSYHVERFISDNFR
                     EKLKEVLLNQKFDIVQIETLFMSPYIDTIREFSKAPIVLRAHNIEYLIWTRVASITRN
                     PFKKAYLKHLAKTLENYEKNILNKYDGIIPISSKDEHFFTQTSTNPVLTISFGVDTSN
                     LKNEDSECEHALFHIGAMNWIPNQEGIKWFLDQVWPKVNRELPQLKLYLAGREMP"
     gene            complement(813..>1982)
                     /locus_tag="QF480_07680"
     CDS             complement(813..>1982)
                     /locus_tag="QF480_07680"
                     /inference="COORDINATES: protein motif:HMM:NF015684.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HJN06480.1"
                     /translation="SLRKAMRPLVILSVIISVMAFLFSNYVLPVANLKFGSLLYDVRQ
                     QKLAFNINEGIYYHGLEGFVIRVGKKAKDNKTIFDVKIYNHSKNRGNLTVTTAERGTM
                     QLSPNEKSLIFTLYNGNRYSEIINVSRYRESRPFESTKFKKQILNFDLSQFQLSHTNE
                     DLFKSHYSMLNIKQLNKSIDSLSKKYIKSENRYKENFFRGYPHLAKIDTSETVIIDSA
                     SQLLIDTIVLPVIYNFETNDKLAIIENAQRAARTAKKKIIDYERELQTRQQIITKHEV
                     AWHQKFKLSIACFIFFFIGAPLGAIIRKGGLGLPVVVSVIFFVLYHVVSMTGEKAVKT
                     GEWNVEFGLWLSTIIVLPLGLFLTYKATTDAQLMDTDSWTKFFKKFDFKRKQIDA"
BASE COUNT          611 a          340 c          324 g          707 t
ORIGIN      
        1 tgggcatttc tcttcccgcc aaatagagtt ttaattgtgg taattctcta tttacctttg
       61 gccaaacttg atcaagaaac cacttaatac cttcctgatt tggaatccaa ttcatggcac
      121 caatatgaaa caaagcatgt tcacactcac tatcttcgtt tttcaagttt gatgtatcca
      181 ctccgaagga tattgttaat accggattag tggatgtttg cgtaaaaaaa tgctcatcct
      241 ttgatgatat agggattatt ccatcatatt tattaagaat attcttctcg taattttcta
      301 gagttttagc cagatgttta agatatgctt ttttgaaggg atttcttgtt atagatgcaa
      361 ctcgtgtcca tattaaatat tcgatgttat gtgctcttag tacaataggg gctttagaaa
      421 attccctgat tgtatcaata taaggtgaca taaacaaagt ctcaatctga acaatatcaa
      481 atttttgatt tagcaagacc tcttttaatt tttctctaaa attatcagaa ataaaccttt
      541 ctacatgata agattttcct gtaaataagt ttaaaaatgc gggaattggt ttcagactta
      601 aatcaatata gacaagctct atatttgttt gttttttata atcctcagga atatctgaaa
      661 tgtcaacatt gtatttgttt gtgtttattg ccagtacctt aactttatga ccagcagcca
      721 caactccttc aataaggtta ttcatagcaa tgggacctcc ctcgtgaggt ggccatggag
      781 atttattaca gataaacaag atatttaact tgttatgcat caatttgttt tcttttaaaa
      841 tcaaactttt taaagaattt agtccaacta tctgtatcca ttaactgagc atctgtagtt
      901 gctttataag taaggaatag ccctagtggc agaactatta tggttgagag ccataaacca
      961 aattcaacat tccattcacc cgttttaact gctttttcac ctgtcattga cacaacatga
     1021 taaagtacga aaaaaatcac tgaaacaaca acaggaagcc ctaaaccacc ttttcgaatt
     1081 atcgcaccaa ggggtgcgcc aataaaaaag aatataaaac aagcgataga taatttgaac
     1141 ttttgatgcc acgcaacttc atgttttgta attatttgct gacgggtttg tagttctctc
     1201 tcatagtcaa taattttctt tttggcagta cgtgccgccc gttgggcatt ctcaatgata
     1261 gcaagtttat cattcgtttc gaagttgtaa attacaggga gtacaattgt gtcaataagt
     1321 agttggctgg ccgagtcaat tattacagtt tcagacgtgt ctatttttgc tagatgcgga
     1381 tatcctctaa aaaaattttc cttataacgg ttctcagact ttatatactt tttgcttagg
     1441 gagtcaattg atttgttcaa ctgtttaata ttaagcattg aatagtgcga tttgaaaaga
     1501 tcctcgttag tatggctaag ttgaaattga gataagtcga agtttagaat ctgtttttta
     1561 aattttgttg attcaaacgg tctgctttct ctatatcttg aaacattaat aatttcacta
     1621 taacggtttc cattgtaaag tgtgaaaatg agactttttt cgttgggaga tagctgcata
     1681 gtccctcttt cagcagttgt gactgttaag tttccacgat tttttgagtg attgtatatt
     1741 ttaacatcaa atatcgtctt gttatctttt gcttttttac caactcttat cacaaaacct
     1801 tcaagaccat gataatatat tccttcgtta atattaaatg ccaacttttg ctgtcgtaca
     1861 tcataaagta acgagccaaa tttcagattg gcaaccggca agacataatt agagaaaaga
     1921 aatgccataa cactaataat tacggaaagt atcactagtg gtctcatcgc ttttcgtaat
     1981 ga
//
LOCUS       DASCQP010000446         2639 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001629416, whole genome shotgun sequence.
ACCESSION   DASCQP010000446 DASCQP010000000
VERSION     DASCQP010000446.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2639)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2639)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2639
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001629416"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..2270)
                     /locus_tag="QF480_07685"
     CDS             complement(<1..2270)
                     /locus_tag="QF480_07685"
                     /inference="COORDINATES: protein motif:HMM:NF013069.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HJN06481.1"
                     /translation="MSRRPDPEITVRQALIVCYYPGAKAVQVEEQVTKQIEDKLFSYA
                     EVKKDDTYSNSYDNMVILTVTLEDWVKIPDLFWERLGQGLIQLANTKLPDGVIGPIVN
                     SDFGDVVALLIGVESEKSSYSEIQEYIGILENSIRRIPATSKIDKLGYWSDEIQVSTS
                     SAKLAQYNIQLNDIIDILKSQNTIKYAGYIESDYSKINLHATGLFKEIDQLKNQQVGE
                     TAEGSIIRLKDIATVERIRQDPTKYIRVNGKESNTMLVSLQMQHGYNIVDYGKEVDKA
                     ISDCKKLLPSDLNITIINNQPDTVKKAVNDFLREFLIAVAAVILVIMLLLPFNIAMIA
                     SFAIPISVGMTFTFLNLFGFELQQVSLASLIVVLGMVVDDAVVVIDNYVSKLDAGMKR
                     FDAAWKAASEFSMPMISSALTIIMSFLPLVFVLSGDVGEFLMSLPITIAIATTCSLIV
                     AFFLTPFLAFLLIKKGLKKDEKEDESKKKKFSLLNIIQISFDKLIDFSMGHKKITLFI
                     GLAVIFLGVYFMKFPKQSFFPKAQRDQFVIQVMEPMGTKLEITNGDIKKIEDILKKDE
                     SITSFSSFVGTSAPRVYYSFSPVFPQESYGMILVNTESADKTAILSAKYLDDLQNLLP
                     NAQVDVMEFSQGAPTLSAVEVRISGDNHNELKRIGESVKNVLRNTDGTRLIVEDFKNN
                     FFINVNVNDIIANQTGYTTEIIADLLAAGFYGAPLSTFWEGDDPIPITFRLDKESREN
                     YNDIMNTYLGSPITGQ"
     gene            complement(2386..>2639)
                     /locus_tag="QF480_07690"
     CDS             complement(2386..>2639)
                     /locus_tag="QF480_07690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06482.1"
                     /translation="MNVELRELEGVISIPAEAVVTDANGHKYVFTVTNDTAINKQRVS
                     CGIAMDSNVKILKGLDPGDIIVVEGQTKLYRGAKVKITN"
BASE COUNT          813 a          524 c          410 g          892 t
ORIGIN      
        1 tactgtccgg taattggaga ccccaggtat gtattcataa tatcattata attctccctt
       61 gattctttat ctaatctaaa ggttattgga ataggatcat ctccctccca aaaagttgac
      121 agaggagcgc catagaatcc tgcagctaat aggtctgcaa taatctctgt ggtatagcct
      181 gtttgattgg caattatatc attaacgtta acatttataa aaaagttatt tttaaaatct
      241 tccacaataa gcctagttcc atctgtattt ctcaatacgt tctttacact ctcccctatt
      301 ctttttagct cattatgatt atcgcctgaa attcttactt caacagccga aagtgtagga
      361 gctccctgag agaattccat tacatcaacc tgtgcattgg gaagaagatt ttgtaaatca
      421 tcaagatact tagccgacaa tatggctgtt ttatctgcac tttcagtatt tacaagtatc
      481 atcccataac tttcttgggg aaaaacagga gaaaaactgt aataaactct tggtgctgaa
      541 gtaccaacaa aacttgaaaa cgaggttatt gactcatcct ttttcagaat atcttcaatc
      601 tttttaatat caccatttgt aatttcaagc tttgttccca tgggttccat cacttgtatt
      661 acaaattgat ctctctgcgc ttttggaaag aaactttgct ttggaaactt catgaaataa
      721 acacccagaa atattactgc caagccaatg aaaagagtta tttttttgtg acccattgaa
      781 aagtctatta acttatcaaa tgaaatctgt ataatattaa gtagtgagaa tttctttttt
      841 ttgctttcgt cttccttttc atctttttta agcccctttt taatgagaag aaaagccaga
      901 aatggcgtga ggaaaaatgc tacaattagc gaacatgtgg tagcaatcgc tatggtaatt
      961 ggaagtgaca ttagaaactc tcccacatcc ccactcaaaa caaaaaccag aggtaaaaag
     1021 gacattataa ttgttaaggc agaagaaatc ataggcatcg aaaattcaga ggctgctttc
     1081 catgctgcat caaatctttt cataccagca tcaagttttg acacataatt atcaattact
     1141 acaaccgcat catcaactac cattcccaaa acaacaatca atgaagcaag ggatacctgt
     1201 tgcaactcaa agccaaaaag attcaaaaat gtaaatgtca tgccaactga aattggaatg
     1261 gcaaatgatg caatcatagc tatgttgaat ggtaacaaca gcattatcac taatattacc
     1321 gccgctactg ctattaggaa ctctctcaag aaatcattta ctgctttttt aacagtatca
     1381 ggttgattat taattatggt aatatttaaa tccgaaggaa gtaatttctt acagtctgaa
     1441 attgccttgt ctacttcctt accataatca acaatattat atccatgttg catttgcagt
     1501 gatactagca ttgtattact ttctttgccg tttacacgaa tatatttagt tggatcctga
     1561 cgaattcttt ctacagttgc aatatccttt agacgtatta ttgatccctc tgctgtctct
     1621 ccaacctgtt gattttttag ctgatctatt tccttaaaaa gtccagttgc atgtagattt
     1681 atcttggaat aatccgactc aatataacca gcatatttta ttgtattctg gctttttagt
     1741 atatctatta tatcgtttag ctgaatatta tattgtgcca gttttgcaga actcgtgctt
     1801 acctgaatct catccgacca atatccaagc ttatctatct tggaagttgc agggatacga
     1861 cgaattgaat tttctaaaat tcctatgtac tcctgaatct cactatagga gcttttctcc
     1921 gattcaaccc caattagcaa agccacgaca tcaccaaaat cagaattaac aattggtcct
     1981 attactccgt ctggtaattt agtatttgcc aactggatta ggccctggcc taaacgttcc
     2041 caaaaaagat ctggaatctt aacccaatcc tctagagtta cagttaaaat aaccatatta
     2101 tcataggagt tggaataggt atcatccttt tttacctccg catatgagaa aagtttatct
     2161 tcaatttgct tggttacctg ctcttcaact tgcacagcct ttgcgccagg ataatagcat
     2221 actattaatg cttgtcttac tgtaatttcc gggtctggac gacgagacat agtgcacaat
     2281 gattaaatcc cctcaatgaa gataataagt atggatatta atgatatctg atggtgttta
     2341 agggatgact tgatgatatt catggaatat gagtttcagt tgttgttaat tagtgatttt
     2401 aaccttagcg cctctgtata atttagtttg tccttcaact acaattatat caccagggtc
     2461 taatccctta agtattttaa cattggaatc cattgcaatt ccacagctta ctcgttgctt
     2521 gtttattgct gtatcatttg tcacggtaaa tacatactta tgtccatttg cgtcggtaac
     2581 tactgcctcg gcaggaattg atattacacc ttccaattcc cttagctcta cattcataa
//
LOCUS       DASCQP010000447         1767 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001631673, whole genome shotgun sequence.
ACCESSION   DASCQP010000447 DASCQP010000000
VERSION     DASCQP010000447.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1767)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1767)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1767
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001631673"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1767
                     /locus_tag="QF480_07695"
     CDS             <1..>1767
                     /locus_tag="QF480_07695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HJN06483.1"
                     /translation="EVGTAGFLRTSVGLTTGRLKNGWGVTFAGSYKRGNGWVDQTFTE
                     GWFYFLRVDKEFGKHLISLSVMGAPQKHGQRRYKKNISMFDSAYAVKSGMRTGLIDTL
                     RMENVPVNMGLRYNPNWGYLSRAYIDNSSVIYPDTVATSTASNYYHKPIFSLRDFWSV
                     NSNLYISNVLYLSIGSGGGKSFSTTPQLDLKTNQQNLQVPYNTNANIYGFNDSLQSFE
                     IMRNAVNNHFWLGLLSTFDYIIDESFSLSGGVDLRTYKGEHYREVEDLFGGRFFRDDG
                     NKNEDNNTKKYVGDKIGYYNDALVRWGGLFAQLKYKSGNLTSFINVTGSLSGFKRIDY
                     FIPQFEDGSVNETDWKYIPGFTVKGGANYNISETMNVFMNLGYLSKAQRFQNVFDRSN
                     KLYLEIKNEKVKAIELGFSYVKPRFTFNANAYYTVWENKPSDRRQTMPDPSDLTKRLT
                     ININDMNALHMGVEFEFAFRITDNLMFESLLSLGDWKWTSADTAILYDDNGVFVGKRP
                     FDAKGLYVGDAAQFQNRESLRWQITNGLYTSGSFTWFGKHYAEFNPMDYNPSDPNSAY
                     AFDENGNPRQSWKIPNYYMVDF"
BASE COUNT          585 a          264 c          367 g          551 t
ORIGIN      
        1 aagaggttgg tacagctggt ttcttaagaa cctcagtggg attgactaca ggaagactta
       61 aaaacggatg gggagtaact tttgcaggtt cctataaaag aggtaatggt tgggttgatc
      121 aaacttttac tgagggctgg ttttattttt tacgtgttga taaggagttt ggaaagcacc
      181 ttattagttt atcagtaatg ggcgctccac aaaaacatgg acagagaagg tataaaaaaa
      241 atatttcaat gtttgatagt gcttatgctg ttaaatcagg aatgagaact ggcttaatcg
      301 atactttaag aatggaaaat gtacctgtta atatgggttt acgttacaat ccaaattggg
      361 gttatttaag tcgcgcttac atagataact ctagcgtaat ataccctgat actgttgcaa
      421 ccagcacagc cagcaattac tatcataaac caatttttag tcttcgcgac ttttggagtg
      481 ttaatagtaa cttgtacata tcaaatgtat tgtatctttc tattggttct ggtggaggga
      541 agtcattttc taccacacca cagctcgacc ttaaaacaaa ccagcagaac cttcaagttc
      601 catacaacac aaatgcaaat atatatggct tcaacgattc tcttcaatca tttgagatta
      661 tgcgtaatgc agtaaataat catttttggt taggattact ttcaacattc gattatataa
      721 tagatgaatc tttttctctc tcgggtggtg ttgatttaag aacgtataag ggggaacatt
      781 atcgtgaagt tgaggattta tttggtggaa gattctttag agatgatggt aataaaaatg
      841 aagataacaa tacaaaaaag tatgttggcg ataagatagg ttattataat gatgctttag
      901 ttcgttgggg aggtttgttt gcgcaactga aatacaaaag cggaaatctt acatctttta
      961 ttaatgttac aggatcattg tcaggattta aaagaatcga ctactttatc cctcaatttg
     1021 aagatggaag tgtaaatgaa acagactgga aatacatacc tggttttact gttaaaggtg
     1081 gagctaacta taacatcagc gaaactatga atgtattcat gaatttagga tatttgtcga
     1141 aagcacaaag atttcagaat gttttcgata gaagcaataa gttataccta gagattaaga
     1201 atgaaaaagt aaaggcaatt gaacttgggt ttagttatgt taaaccccgt tttactttca
     1261 atgctaatgc ttattataca gtttgggaga acaaaccaag cgacagaaga caaaccatgc
     1321 cagatccaag tgacctcact aagagattga caataaacat aaatgacatg aatgctttgc
     1381 atatgggtgt tgaatttgaa tttgctttca gaataaccga taacctcatg tttgagagtt
     1441 tactatcatt gggtgattgg aaatggacat ctgctgatac tgccatctta tacgatgata
     1501 atggggtgtt tgttggtaaa agaccatttg atgccaaagg gctatatgtt ggtgatgctg
     1561 ctcaatttca aaatagagag agtctaaggt ggcaaatcac aaacgggtta tatacatccg
     1621 gctcatttac ttggtttgga aagcattatg cggagtttaa tccaatggat tacaacccat
     1681 cagacccaaa tagtgcatat gcatttgatg aaaatggaaa tccgcgccag tcatggaaaa
     1741 ttccaaacta ctacatggtg gattttc
//
LOCUS       DASCQP010000448         2856 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001632544, whole genome shotgun sequence.
ACCESSION   DASCQP010000448 DASCQP010000000
VERSION     DASCQP010000448.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2856)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2856)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2856
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001632544"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..780
                     /locus_tag="QF480_07700"
     CDS             <1..780
                     /locus_tag="QF480_07700"
                     /inference="COORDINATES: protein motif:HMM:NF028180.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06484.1"
                     /translation="VVLLPHGYEGQGPEHSSARMERYLLLCADNNIQVANCTTPANFF
                     HVLRRQLYRSFRKPLIIFTPKSLLRHHECISSIKDFTSGGFKEIIDDTTVHPEKVDKV
                     VLCTGKIYYEMLEENKKQKSGNIAIIRIEQLYPFPKNQLLKILKRYKNTKTFIWAQEE
                     PANMGAWEFIYNILADDIKIKVISRPASGSPATGSNKFHIIRQQKIIDKVFELCDCPY
                     LNDECKMVCIGNKWKSFEKELQEHNIKNIDSKLHSGKKPLK"
     gene            826..2082
                     /gene="odhB"
                     /locus_tag="QF480_07705"
     CDS             826..2082
                     /gene="odhB"
                     /locus_tag="QF480_07705"
                     /EC_number="2.3.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019540990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045252 - oxoglutarate dehydrogenase
                     complex [Evidence IEA];
                     GO_function: GO:0004149 - dihydrolipoyllysine-residue
                     succinyltransferase activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase complex
                     dihydrolipoyllysine-residue succinyltransferase"
                     /protein_id="HJN06485.1"
                     /translation="MNVEIKVPSPGESITEVQIAAWLVANGDQVDENQDVVEIDSDKA
                     TLSIASGASGKISIKVEEGETIQVNSVVAEIDTSVKGKSTEKVPKVVDPRKEKGSSEP
                     KKITSKEETQTVNKLNISPLARKMMDSNKISESDINEFMTHHRVGKKDIEHFIKKGGQ
                     SKIGSYRSTSTLWSGSRETKRTKISMLRKKLSQRLVAVKSETAMLTTFNEVNMTAIMS
                     IRKKYKESFSIQHDVNLGFMSFFTKAVTEAMASFPQINSQIDGDEIINFDYVDVSIAI
                     SAPKGLVVPVLRNAEIMNLAQIEKEIKSLATKAHDNKLTLDEMQGGTFTITNGGVFGS
                     MLSTPILNPPQSAILGMHNIIEKPIAVNGKVEIHPMMYLAMSYDHRIIDGRESVGFLV
                     KVKEMLENPESMLFGSKDPIEVLLGI"
     gene            complement(2106..>2856)
                     /locus_tag="QF480_07710"
     CDS             complement(2106..>2856)
                     /locus_tag="QF480_07710"
                     /inference="COORDINATES: protein motif:HMM:NF013703.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HJN06486.1"
                     /translation="ATVIAQYSGLLIAIYFLFAKYRPYVKRYTMHLIMRSDEIIRFFK
                     VNSDIFIRTVLLLLTLAFFTNMSAKHGNDILAVNTLLFQFFFIFSYFADGFAFAGEAL
                     TGKAIGAGDRRLLNRMVRNLFYWGAGAAILASFVYAIGLEPLMKIMTSNSLLLEMSMN
                     YSIWVVIIPLTSSAAFIWDGIFIGVTAAKDMRNAMIISSLVIFLPAYYLTANLWGNDA
                     LWFALNLFMMARGVLMWLMWKRMKIKSVSFK"
BASE COUNT         1029 a          494 c          528 g          805 t
ORIGIN      
        1 gttgttcttt tgccccatgg gtatgaggga caaggtcctg aacattcaag tgcgcgtatg
       61 gagagatatt tattactatg tgctgataat aatattcagg ttgcgaattg caccacgcca
      121 gcaaattttt ttcatgtact acgccggcaa ttatacagat ccttcaggaa acctcttatt
      181 attttcactc cgaaaagttt attgcgccat catgaatgta tttcatcaat aaaagatttt
      241 accagtggtg gtttcaagga aattattgat gatactactg tgcaccctga aaaagtagac
      301 aaagttgttc tatgcacagg gaagatctac tatgagatgc ttgaggaaaa taaaaagcaa
      361 aaatcaggca atatagcaat catacgcata gagcaactat atccttttcc aaaaaatcag
      421 ttactgaaaa tactgaaaag atataaaaac accaagacat ttatttgggc tcaagaagaa
      481 ccagcaaata tgggtgcctg ggaattcatt tataatatac ttgcggatga tatcaagatt
      541 aaagtgattt caagacctgc cagtggtagc ccagccacag gatcaaacaa attccatatc
      601 ataaggcaac aaaaaataat tgacaaagta tttgaattgt gcgattgtcc atatttaaat
      661 gatgaatgca aaatggtatg cattggaaat aaatggaaat cctttgaaaa agaattacaa
      721 gagcataata ttaagaatat tgacagcaag ttacactcag ggaaaaaacc attaaaatga
      781 ctataagttt aaggccaaaa ttacagttat tctaaaaata caactatgaa tgttgagata
      841 aaagttccaa gtccaggaga atcaataact gaagtacaaa ttgcagcatg gttagtagcc
      901 aatggtgacc aagttgatga aaatcaggat gtagtagaga tagattctga taaggctaca
      961 cttagtattg catcaggtgc atcaggtaag atatccatta aagttgaaga aggtgaaacc
     1021 atccaagtta attcagtggt agcagaaata gacacttctg ttaaaggcaa gtctacagaa
     1081 aaagttccta aagtagttga tcctagaaag gaaaagggtt catctgaacc taagaaaatt
     1141 acttctaaag aagaaactca aacagtaaac aaacttaata tttctccttt agcccgcaaa
     1201 atgatggatt caaataaaat tagtgaaagt gatataaatg aatttatgac gcatcatcgc
     1261 gttggtaaaa aagatattga acattttatt aagaaaggtg gtcaaagtaa aattggtagt
     1321 tacagatcaa cttcaacact atggagcgga agtcgtgaaa ccaaacgcac caaaataagt
     1381 atgttgagga agaagctctc gcaaagacta gtagctgtaa aaagtgaaac ggcgatgctc
     1441 acaacattca atgaagtaaa catgaccgct attatgtcaa ttcgcaagaa atacaaggaa
     1501 tcgtttagta tacaacatga tgttaatctt ggtttcatgt cgttcttcac taaggcagtt
     1561 actgaggcta tggcatcatt tcctcagata aactcacaaa ttgatggaga tgagattatt
     1621 aactttgatt atgttgatgt gagcattgct ataagcgctc ctaaaggact tgttgttcca
     1681 gttcttcgca atgctgaaat catgaacctg gctcaaatag aaaaagagat caaaagtctg
     1741 gctactaagg cacacgataa caaacttacc ctagatgaaa tgcagggagg aacatttaca
     1801 ataactaatg gaggtgtgtt tggttcgatg ttatcaacac ctatattaaa tcctcctcag
     1861 agtgcaattc ttggaatgca taatattatt gaaaaaccaa ttgcagttaa cggtaaagta
     1921 gaaattcacc ctatgatgta ccttgcaatg tcttatgacc acagaataat agatggtcgt
     1981 gaatcagtag gatttctagt aaaggttaag gaaatgttag aaaacccgga aagtatgctg
     2041 tttggctcaa aagatccaat tgaagtgcta cttgggattt aaatatgcgg ctatcctgtt
     2101 gttcgttatt taaatgagac actcttgatc ttcatccttt tccacatcaa ccacatcaat
     2161 actccacgtg ccatcataaa caaattcaat gcgaaccata gcgcatcatt accccaaagg
     2221 tttgcggtaa gatagtatgc tggtaagaaa attaccaatg atgatataat catagcatta
     2281 cgcatatcct ttgctgcggt tactcctata aaaattccat cccatataaa agcagcactg
     2341 ctggttaatg gtattatcac aacccagata gagtagttca ttgacatttc aagtagcaga
     2401 gaattgctgg tcataatttt cattagtggt tcaagaccta ttgcataaac aaaacttgcc
     2461 aatattgctg ctccagctcc ccagtagaat agatttctta ccattctatt aagcagtctt
     2521 ctatcacctg ctccaatagc ttttcctgtt agagcttctc ctgcaaaggc aaacccatcg
     2581 gcaaaatatg agaatataaa gaagaattga aaaagcaatg tattgactgc aagaatatca
     2641 ttgccatgtt tggctgacat gtttgtaaaa aatgccagcg taagcaatag tagcaccgta
     2701 cgaataaaga tgtctgaatt aactttaaag aacctgatta tctcatccga tctcataatc
     2761 aagtgcattg tatatctttt cacatatggt cggtactttg caaacaggaa ataaatagca
     2821 attaacaatc ctgaatattg agctataact gttgcc
//
LOCUS       DASCQP010000449         2052 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001638975, whole genome shotgun sequence.
ACCESSION   DASCQP010000449 DASCQP010000000
VERSION     DASCQP010000449.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2052)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2052)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2052
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001638975"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..180
                     /locus_tag="QF480_07715"
     CDS             <1..180
                     /locus_tag="QF480_07715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009136972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJN06487.1"
                     /translation="MMRIPFGVPMWQIWLSMSLLIIGFISTTWLAGKIYRTGILMYGQ
                     KVSYPIIWKWLTKKY"
     gene            complement(210..665)
                     /locus_tag="QF480_07720"
     CDS             complement(210..665)
                     /locus_tag="QF480_07720"
                     /inference="COORDINATES: protein motif:HMM:NF039391.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6265 family protein"
                     /protein_id="HJN06488.1"
                     /translation="MRPVMLLLLFLSLNSCYNPSATEIINDLEILVGEWESYKGVKFN
                     ENWRFVSDNLLAGEGFSLNGIDTAFFESLKIIRKGDSIYYRVLFDNQKVITDFTLTEA
                     SKTRWTFINPNNDFPSIIIYDVQKDSLLLVTISNIRGNKEQFFYLKRRK"
     gene            977..>2052
                     /locus_tag="QF480_07725"
     CDS             977..>2052
                     /locus_tag="QF480_07725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013613429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecDF"
                     /protein_id="HJN06489.1"
                     /translation="MQNRGAIKFFAIAFALVCLYQLSFTFVTSRVEKKAKDYATNEIA
                     VQQANELADGNKALESYLMDSIVSARETYYLDSISNVEVYNILVTNYTFKECKEREIN
                     LGLDLKGGMNVVLEVSVGDIVNALGGNSQDPVFREAMSLAYQKQKNSGRGFVTLFGES
                     FNEVDPNARLASIFLYEFKDKGITTNSTNEEVLSVINQEADEAIDRSYQILRTRIDRF
                     GVAQPNIQKLSTTGRIAIELPGIKDPQRVRKLLQGTAKLEFWETYNFSELYTFFDEAN
                     ATLRTEEVLDEETLEAEAEKTEEKETTTADDNTIAGDTDDSATISEEDENRESTNKLL
                     EQIAADTTGDTPEETSFDDYAKRYP"
BASE COUNT          717 a          333 c          356 g          646 t
ORIGIN      
        1 atgatgcgca taccatttgg tgttcctatg tggcaaatat ggctttcaat gagtttatta
       61 attataggtt tcatttcaac aacatggctt gctggtaaaa tctaccgcac aggaatccta
      121 atgtatggac aaaaagttag ttatcctatt atttggaaat ggctcactaa gaagtattaa
      181 tccataatac tctccaaagt tctacaagat tactttcttc ttttcaaata aaaaaattgc
      241 tccttattac ctcttatatt tgaaatggtt actaaaagca aactgtcttt ttgaacatcg
      301 tatattatta ttgaagggaa atcattgtta ggattaataa aagtccatct tgttttagag
      361 gcttcagtaa gagtaaaatc agtaattact ttttgattat caaataatac tctataatag
      421 atcgaatcac cttttcttat aatctttaaa gattcaaaaa aagctgtatc tattccattt
      481 aaactaaaac cttcgccagc aagaagattg tcactaacga acctccaatt ctcgttaaat
      541 ttgactcctt tgtacgattc ccactcacca acaaggattt caagatcatt aatgatttct
      601 gttgcggatg gattataaca tgaattcaaa gagagaaata acaacaataa cattactggt
      661 ctcataactg acaggtaatt aagtgaacaa aaataagtgt ctaaaattaa ttaaaatgta
      721 tattagttag caattttatt ttgattgatg agcagaaaat atattggatt gtacttgctt
      781 ttaacgctgc ggaaatactt cccataaatt tctttctgta aacttaaact tgatgttttt
      841 ttgattgata aagtgtctta aattcaagtc gttgattagt taatttatta attgctatca
      901 atttgctaat tctcaaatat tatcctattt ttgcaccctc aaaaaaatga agtaaataat
      961 taataactaa gatcaaatgc agaatagagg agctataaag ttttttgcca ttgcttttgc
     1021 attagtttgt ctgtatcaac taagctttac cttcgttaca agcagagttg aaaagaaagc
     1081 taaagactat gcgaccaatg aaatcgctgt tcagcaagcc aatgaacttg ccgatggaaa
     1141 taaagcttta gaatcctact taatggattc tattgttagt gccagagaaa catattatct
     1201 ggatagcatt tccaatgttg aagtttacaa catactggtt acaaattata catttaaaga
     1261 atgtaaagaa agagagatta atctaggact tgatcttaaa ggtggaatga atgtggtact
     1321 tgaagtatca gttggagata ttgttaatgc tcttggtggt aacagtcagg atccggtctt
     1381 cagagaagcc atgagtctag cttatcaaaa acaaaagaac agcggacggg gatttgttac
     1441 attattcgga gagtcattta acgaagtgga tccaaacgcc agacttgctt ctattttcct
     1501 ttatgagttt aaggataaag ggattactac taactcaaca aatgaagaag tactatctgt
     1561 gataaaccaa gaggctgatg aagctattga cagatcatat caaattcttc gtacacgtat
     1621 tgaccgtttc ggtgttgcac aaccaaatat ccaaaaactt tccacaactg gccgtatagc
     1681 aatagaactg cctggtatta aagaccctca gcgtgtcagg aaactcttac aaggaaccgc
     1741 taaacttgag ttctgggaaa cttataattt ctcagaactt tatacttttt ttgatgaagc
     1801 aaatgcgacc ttaagaactg aggaggtatt agatgaagag acactggagg ccgaggcaga
     1861 aaagacagag gaaaaagaaa caactaccgc tgatgataat accattgccg gtgatactga
     1921 cgatagtgct acaatatctg aagaagatga gaatcgagaa tctacgaata aacttcttga
     1981 acagattgct gcagatacca ctggtgatac tcctgaagaa acaagttttg atgactatgc
     2041 taaaagatat cc
//
LOCUS       DASCQP010000450         2099 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001639224, whole genome shotgun sequence.
ACCESSION   DASCQP010000450 DASCQP010000000
VERSION     DASCQP010000450.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2099)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2099)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2099
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001639224"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(94..1047)
                     /locus_tag="QF480_07730"
     CDS             complement(94..1047)
                     /locus_tag="QF480_07730"
                     /inference="COORDINATES: protein motif:HMM:NF012722.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HJN06490.1"
                     /translation="MKLLNKTSLIIVTVALFIFFLGGIAFYKIIQSMIITQVDRELVN
                     QKHNVINELNSFLKLDDVFLITENKINIKRMDSRSHIDEMFKDTVLYDQREKLFVPYR
                     QLRFHTIIGENNFKFSIYRSMLEAENLIEQIVITMTLMLVAFILSMFFLNRYFFRKIW
                     DDFFFAVNKVQKYNLRDDPNLNLQISEVEEFQMLNEVFETLTDRIHKDYLSLKEFTEN
                     ASHEIQTPLSIMRAKIELLLQYPGYKEDQVALISSLNEAVNRLSNINKVLILLTRIEN
                     NQYPELSKVHLKERIDYHLENFKEVIECIVSAKSELFTSQI"
     gene            complement(1051..1728)
                     /locus_tag="QF480_07735"
     CDS             complement(1051..1728)
                     /locus_tag="QF480_07735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006799900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HJN06491.1"
                     /translation="MKILIIEDEMALAESIGHYLSDEGYLYELAFDYSSASAKINAYD
                     YDCVIVDINLPDGNGLNIIRELKENQSTSGIIIISARNSLVDRITGLDIGADDYLVKP
                     FNLSELNARIKSVIRRISFSGSNEIIFNEIRIDIDSIQVFVHDGLVNLTKKEFDMLIF
                     FISNKNRVLTKESIGENVWGDYADSLNSFDFIYTHIKNLRKKLLDKGADDYLQNVYGV
                     GYKFNTL"
     gene            complement(1905..>2099)
                     /locus_tag="QF480_07740"
     CDS             complement(1905..>2099)
                     /locus_tag="QF480_07740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06492.1"
                     /translation="ILNKFWVHLQDGTEHNGDFDLTVTTLDTVNPGTVVTYEGIIELN
                     KDFGAGYSYAVIMEEAKLVK"
BASE COUNT          678 a          368 c          304 g          749 t
ORIGIN      
        1 ttccttttta aatcactaat tagtgaagtt gcacttttct tcctagccat tttctttact
       61 ttttaagatt aataaaatta taaaatatat atcttaaatt tgactcgtga aaagttcact
      121 ttttgctgaa actatacatt ctattacctc cttgaagttt tctaagtggt aatctatcct
      181 ttcctttaaa tgcaccttcg acaattccgg gtattgatta ttctcaattc gggtgagtag
      241 tatcagaact ttattgatat tagataggcg gttaacagct tcatttaacg aactaatcag
      301 tgcaacctga tcctctttat acccgggata ctgcaatagt aattcgattt tggcccgcat
      361 tatagaaaga ggtgtctgga tttcatgaga tgcgttctct gtgaattctt taaggctcag
      421 ataatctttg tgaattctat cagtaagcgt ttcaaatact tcgtttaaca tttggaattc
      481 ttcaacttca gaaatttgca ggtttaggtt tggatcatct cttaagttat atttttgaac
      541 tttattgacc gcaaaaaaga aatcgtccca aatctttcgg aaaaaatagc ggttaaggaa
      601 gaacatagat aaaataaaag ctaccaacat gagagtcatg gtgataacaa tttgttctat
      661 taggttttct gcctccaaca ttgaccggta tatagaaaat ttaaagttgt tttctccaat
      721 tatagtatga aaccttaatt gtctatatgg aacaaatagt ttctctcttt gatcatacaa
      781 aaccgtatcc ttaaacattt catctatatg ggatcttgaa tccatccttt ttatgtttat
      841 tttattttcg gtaatgagga aaacatcatc taactttaag aagctattca gttcatttat
      901 aacattatgt ttttgattaa ccagttcacg atcaacctgc gttattatca tcgactgaat
      961 gattttatag aaagctattc cacctaaaaa aaatataaat aaggctactg ttacaataat
     1021 caggctggtt ttattgagta gtttcatctg ttataatgta ttgaatttat atcctacgcc
     1081 atatacattt tgtagataat cgtcggcacc cttatctaat aatttttttc gcagattttt
     1141 tatatgggta taaatgaaat caaaagaatt caatgaatca gcataatcac cccaaacatt
     1201 ttctcctata gattctttag ttaaaactct atttttatta gaaataaaaa agataagcat
     1261 atcgaactct tttttggtca aatttactag cccatcatga acaaatacct gaattgaatc
     1321 aatatcaatt cgtatttcat taaaaataat ttcattgctt ccgctaaagc taattcttcg
     1381 gataaccgat ttgattcgtg catttaactc ggacaaattg aaaggcttta ccaaataatc
     1441 gtctgcacct atatcgagtc ctgtaatacg atcaaccaag gagttacggg cagaaataat
     1501 gatgattcct gaagtagatt gattttcctt taattcacgg ataatattta agccattacc
     1561 atcaggaagg tttatatcaa ctataacgca atcataatcg taggcgttga ttttagcaga
     1621 tgcactgcta tagtcgaagg ccaattcgta aaggtatccc tcatcgctaa ggtaatgccc
     1681 gatagattcg gccaaggcca tctcatcttc tatgatcaat atcttcattt acaggaaatc
     1741 cactatttga tgctggacaa atctacaaaa atatacttct taattatagt aattcatcac
     1801 taaaaccaac atctttaatg ttgatcttgg cagaagtaaa aaatagtttc tttacttata
     1861 tttggttgga aatacttcgt tgttttacaa agtagttgtg ctcactattt aactagtttc
     1921 gcctcttcca taattactgc gtaagaatag ccagctccaa aatccttatt taattcaatg
     1981 ataccttcat aagttaccac agtacctggg ttaacagtat ctaatgtagt aactgttaaa
     2041 tcaaaatctc cattatgttc agttccatct tgaagatgaa cccagaattt gttcaagat
//
LOCUS       DASCQP010000451         1637 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001641596, whole genome shotgun sequence.
ACCESSION   DASCQP010000451 DASCQP010000000
VERSION     DASCQP010000451.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1637)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1637)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1637
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001641596"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..755
                     /locus_tag="QF480_07745"
     CDS             <1..755
                     /locus_tag="QF480_07745"
                     /inference="COORDINATES: protein motif:HMM:NF013885.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="bile acid:sodium symporter"
                     /protein_id="HJN06493.1"
                     /translation="HDYLTPTMALGMILVSVCPGGNISNFISSLAKGNLALSVCLTAI
                     ATLGAIFFTPINFAFWGKQTINFYQAADPDMLLRPLEIDAYQMFRTVLIILGIPLILG
                     IFINTKYALFTSKIVKPLKMFSIILFAVFVILAIVKNFEYFEIAIGYIFLIVLIHNTL
                     AFGSGYFLGLIGRRPIVDRKTIAIETGIQNSGLALVLIFNPNIFPPELELGGMAIIAA
                     WWGIWHILAGLLLAGFWSKFKYGLTKTKALTN"
     gene            755..>1637
                     /locus_tag="QF480_07750"
     CDS             755..>1637
                     /locus_tag="QF480_07750"
                     /inference="COORDINATES: protein motif:HMM:NF013702.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HJN06494.1"
                     /translation="MGLNNIEKKSVGYNILKVWVKFWHNKIYYRNYTILGTENIPANK
                     PIIFTVIHQNALMDALALLFSIKKQLVFIARADIFKKPAIANILYFLKILPIYRVKDG
                     FNTVKKNQDTILKTVDIMTSGNAIVILPEGSHAGLRRLRPLKKGFAHMAFQAEEVNNS
                     SLDVHIVPVGLDYENYHNVRSSLIVNFGEPIAVKEYIELYKENSAIAINEIKQRLSEH
                     IKPLIVNIESENNYNLYNELRDIYRSRMARILRIDTTDEKNRIYIDQQLIERVSNYEK
                     QNPGRFEDHQQTVNRFIK"
BASE COUNT          546 a          253 c          292 g          546 t
ORIGIN      
        1 tgcatgatta tttaactccc acaatggcat taggaatgat actggtttca gtttgtcccg
       61 gaggtaatat atctaatttc atctcatcac ttgccaaggg taacctggca ttaagtgttt
      121 gccttactgc aatagcaaca cttggagcca ttttttttac accaattaat tttgctttct
      181 ggggcaaaca aactatcaac ttttatcagg ctgctgaccc tgatatgctt ctacgtcctc
      241 tggaaattga tgcataccaa atgtttcgta ctgtattaat aattcttggt atccctctaa
      301 tattaggtat atttatcaat actaagtacg ctttatttac ctcaaagatt gtaaaaccat
      361 taaaaatgtt ttccataata ctatttgcag tatttgtaat acttgcaatt gttaaaaact
      421 ttgaatattt tgaaattgct ataggttata tctttcttat agtcctaatt cacaatacat
      481 tggctttcgg tagtggctat tttctgggat taattggccg tagaccaata gttgacagaa
      541 agaccattgc aatagaaaca ggcattcaaa attcgggact tgcactggta ttgattttta
      601 atcctaatat atttcctccc gaactagaat taggcggaat ggcaataatt gctgcatggt
      661 ggggtatatg gcatatactt gcaggacttt tattggcagg gttctggagt aagttcaagt
      721 atggtttaac aaaaactaaa gctcttacaa attaatgggt ttaaataata ttgaaaagaa
      781 gtcggtaggt tataatatcc tcaaggtctg ggttaaattt tggcataaca aaatctatta
      841 tagaaattat actattctag ggactgaaaa cattccagct aacaaaccta ttatatttac
      901 tgttattcat caaaatgccc tgatggatgc acttgcatta ctttttagta ttaaaaagca
      961 acttgttttt atagcccgtg ctgatatttt taaaaaacct gctatagcaa atatattata
     1021 tttccttaaa atacttccga tttatcgtgt taaggatggt tttaacacag ttaagaaaaa
     1081 tcaagataca attcttaaaa ccgttgatat tatgacctct ggcaatgcaa tagttattct
     1141 gcctgaagga agtcatgctg gtttaagaag actaagacct ttaaaaaaag gatttgccca
     1201 catggctttt caggctgagg aggtaaataa ttcttcacta gacgtacaca ttgttccggt
     1261 aggactagat tacgagaatt atcataatgt aaggagttca ctgatagtta attttggaga
     1321 accaattgca gtaaaggaat atattgagtt atataaagag aattctgcta ttgcaattaa
     1381 cgaaattaag caaaggttaa gtgaacatat aaagccactg attgtaaata ttgagagtga
     1441 aaataattac aatttgtata atgaattaag agatatttat cgctcgcgaa tggccaggat
     1501 attaaggata gataccactg atgagaagaa tcgaatttat attgaccagc agctgattga
     1561 acgtgtatct aattacgaaa agcaaaatcc gggtagattt gaagatcatc agcaaactgt
     1621 gaataggttc attaagt
//
LOCUS       DASCQP010000452         5354 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001642048, whole genome shotgun sequence.
ACCESSION   DASCQP010000452 DASCQP010000000
VERSION     DASCQP010000452.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 5354)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5354)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5354
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001642048"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..885)
                     /locus_tag="QF480_07755"
     CDS             complement(<1..885)
                     /locus_tag="QF480_07755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008655768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HJN06495.1"
                     /translation="MNQGKYVFAQLTDFLPRRTFDRIVHKHSGNKYVRSFTCWNQMLC
                     MVFGQLTARDSMRDLILSLEAHKPKYYHLGFGKTISRRNLGIANERRSAKIFEEFAYV
                     LIDEARKSCYKSDFELEIDGNVYALDSSTIDLCLSVFWWAEFRKTKGGVKLHTLYDVK
                     TSIPSFIHISTASLHDVNVLDIIQYEAGSFYVIDKAYIDFERLFKLHCQGAYFVTRAK
                     NNMRFKRMYSNFRDKDTGVLYDQIGKLEIDSSRKAYPDKLRRIKYYDVDKQKQFVFLT
                     NNIDMEALEIAYLYKKRWE"
     gene            complement(1112..1927)
                     /locus_tag="QF480_07760"
     CDS             complement(1112..1927)
                     /locus_tag="QF480_07760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013613217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TPM domain-containing protein"
                     /protein_id="HJN06496.1"
                     /translation="MRIKRHSKIFSITILMFFSFIIANAFGQSIPQRPNPPQLVNDFA
                     NILTLKERSTLEKKLVAFNDSTSNQIAIVTVRSLNGYTPSMFAFEIGEKWQVGQKKFD
                     NGIVIVIKPKLSSTDRGQAFIAVGYGLEPAIPDAIGKRIVDNEMIPYFRRDNYYQGIN
                     NAISVLMQLAAGEISSDEYKKQTGTSGIFSFLPFVILLILIIVIRSNRGRSHSIGSNA
                     SLWTALWLGSALGGGSHSGNWGNFSGGGSGFGGGGFGGFGGGSFGGGGAGGSW"
     gene            complement(1945..2388)
                     /locus_tag="QF480_07765"
     CDS             complement(1945..2388)
                     /locus_tag="QF480_07765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018336466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TPM domain-containing protein"
                     /protein_id="HJN06497.1"
                     /translation="MKAKAKDFFNKEERSEIKKAILNAELDTSGEIRVYIENDCNGDV
                     LDRASYLFKKLNMEKTDLDNGVLFYLAIVSKKFAIIGDTGINKEVPKDFWKEIKDSMA
                     KQFEAGEFTEGLTSGIAKAGVRLKKHFPHHIDDINELSDDISFGD"
     gene            complement(2414..3004)
                     /locus_tag="QF480_07770"
     CDS             complement(2414..3004)
                     /locus_tag="QF480_07770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005847199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HJN06498.1"
                     /translation="MKKSWIIIIIIVILGFITYSWFKGTYNNMVTLSETVDKQWADVE
                     NVYQRRADLIPNLVATVKGYASHEKETLEGVINARAKATSTTINAGDLTPGKIAAFQQ
                     AQDGLSSALSKLMVVVERYPELKANQNFLELQAQLEGTENRIAVERRKFNESARNYNT
                     YIKLFPKNMLANMFGFEKKPYFEAQEGADEAPKVEF"
     gene            complement(3090..4166)
                     /locus_tag="QF480_07775"
     CDS             complement(3090..4166)
                     /locus_tag="QF480_07775"
                     /inference="COORDINATES: protein motif:HMM:NF037962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative manganese transporter"
                     /protein_id="HJN06499.1"
                     /translation="MHDIFPIIRQSLTITLFVLSMMLIIEYLNVFSKGIWGNKLKTST
                     WKQIFLAALLGLIPGCLGAYTAVSLYIHNVIGTAALATAMIATSGDEAFFLFSIIPET
                     AILISILLFLIAIASGFIVNIFIKKDKSIVNYGEEHMEVHTDEVDCFCFNKKDILDNF
                     KHLTALRAILILVLGGSLAAILFVGGNDHEGHIELLSIPEAVHVHPEWIKYTFITVLS
                     ISLLMLLTVNDHFLADHIKAHIIKKHLVRILLWTFFTLLLLHFVNQYLDFEKIIGDNI
                     YIVLIIAVLVGIIPESGPHLLFIILFASGSLPFSILLANSIVQDGHGSLPLLAETRKG
                     FIIVKAINISVGLLVGIIGIAAGV"
     gene            complement(4226..4804)
                     /locus_tag="QF480_07780"
     CDS             complement(4226..4804)
                     /locus_tag="QF480_07780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008146779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rubrerythrin family protein"
                     /protein_id="HJN06500.1"
                     /translation="MMNSLEGTLTEQNLLKAFAGESQARMRYDYFASKAKKEGLEQIA
                     ALFTETALNEKEHAKRFFKFLEGRPVEITATYPAGIIGTTLDNLKAAAEGENEEWTEL
                     YPEFARIAEEEGFKEVAVAFKMIAKVEKAHENRYLKLYSNLNDGHVFERNEKIIWKCR
                     NCGYLHEGEKAPQKCPACLHPQSYFEIKENNY"
     gene            4947..>5354
                     /locus_tag="QF480_07785"
     CDS             4947..>5354
                     /locus_tag="QF480_07785"
                     /inference="COORDINATES: protein motif:HMM:NF012471.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004181 - metallocarboxypeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M14 family zinc carboxypeptidase"
                     /protein_id="HJN06501.1"
                     /translation="MRRCILIFTIFIAAIYLAYGQADGLTVAEETDYSSTSTYSDVIK
                     FIANLQEQSPFVKIDTIAQSIEGRIVPMMIIANPLPENPKQVGDRIVVYIQANIHAGE
                     VEGKEASLMLARDLLKNPSSEIMKNVVTLIVPIL"
BASE COUNT         1680 a         1017 c          830 g         1827 t
ORIGIN      
        1 ctcccaacgt ttcttgtaca aataggcaat ctctaatgct tccatgtcta tattattggt
       61 caagaaaaca aattgttttt gcttgtcaac atcatagtat ttgattcttc tcaatttatc
      121 tggatatgct tttcttgaag aatctatctc aagttttcca atctggtcgt acaacacacc
      181 agtatcttta tccctgaaat ttgagtacat acgcttaaac cgcatattgt tttttgctct
      241 tgttacaaaa taggctcctt gacaatgaag tttgaacaaa cgttcaaaat cgatgtaggc
      301 tttatcaatc acataaaagc tccctgcttc gtattgaata atatccaata cattgacatc
      361 gtgtaagcta gctgtagaga tatgaataaa actcggtatt gaggttttta catcataaag
      421 agtgtgtaac ttcacacctc ctttggtctt tcgaaattca gcccaccaga atacacttaa
      481 acaaaggtct atcgtagaag aatctaatgc atacacatta ccatcaattt ctagttcaaa
      541 atcgcttttg taacaactct ttctagcttc atcgattaaa acatatgcaa actcttcaaa
      601 gatttttgca cttcgccttt catttgcaat cccaagattt cgccttgaaa tagtctttcc
      661 aaaaccaagg tgataatatt ttggtttatg agcctccaaa cttagtatca aatctctcat
      721 actatctcta gctgtgagtt gaccgaatac catgcagagc atctgattcc aacaagtaaa
      781 gcttctgaca tatttattcc cagaatgctt gtgaactatt cgatcaaaag ttctacgcgg
      841 tagaaaatcc gtaagttgtg cgaaaacgta tttgccttga ttcatagatt taagctttta
      901 agcaaaaatc taaattcatt tcaaatcgtc acgctacaaa aaatagctac aagtgcgata
      961 aacaaagtat ttctaagaac gtattttaat ttttaatgcc cactaatgat cctacctaga
     1021 tatttcttac taaaagaata aataacttac ttgttttgtg ctcgtttatt tgttaattct
     1081 gatattattc agaatacctg ttcaattatg tttaccaact tcctccggcg cctccaccgc
     1141 cgaaacttcc accaccaaat ccgccaaatc cacctccacc aaatcctgat cctcctcctg
     1201 aaaaattacc ccagttaccg gaatgtgaac cgcctcctaa tgcgctacca agccataaag
     1261 cagtccataa tgacgcgttt gatccaatgc tgtgtgatcg gccacggttc gatctaataa
     1321 caatgataag tattaaaagg attacaaaag gtaagaatga aaatatgcct gacgttcctg
     1381 tttgtttttt gtattcatca gatgatatct caccggctgc taattgcatt aatacagaaa
     1441 tagcattatt aataccttgg tagtaattat cgcgtctgaa ataaggtatc atttcattat
     1501 ctacgattct ttttccgata gcatctggta tagcaggctc cagtccataa ccaacggcaa
     1561 taaatgcttg gcctctatct gtagaactaa gctttggttt tataacaatt acaattccat
     1621 tatcgaactt tttttgaccc acctgccact tttctccaat ctcaaatgca aacattgatg
     1681 gtgtataacc attaagagat ctgacagtga caattgcaat ttgattagag gtcgaatcgt
     1741 tgaaagccac aagttttttt tcaagtgtgc tccgctcttt taatgtaaga atatttgcaa
     1801 aatcattaac aagctgtggg ggattaggcc tttgtggaat tgattgacca aatgcattgg
     1861 caataataaa gctaaaaaac attaaaatgg taatgctaaa aattttgctg tgtcgtttta
     1921 ttcgcataat taattgttct tctatcagtc accaaaagat atgtcatccg acagctcatt
     1981 gatatcgtca atatgatgtg ggaagtgttt ttttaaacgt actccagctt tagctattcc
     2041 actagtcaaa ccttcagtaa attcgccagc ctcgaattgt ttagccatcg aatctttaat
     2101 ttctttccaa aaatctttag gaacttcttt attgattcct gtgtcaccaa taatggcaaa
     2161 tttcttgctt actatggcga gataaaacag tacaccatta tcaaggtctg ttttttccat
     2221 atttaatttt ttaaataaat atgatgctct gtcaagtaca tcaccattac aatcattctc
     2281 aatatacact cttatctctc ctgaagtatc tagttcagca tttagaatag cttttttaat
     2341 ctccgatctt tcttctttgt taaagaagtc ttttgctttt gctttcatga gattatagtt
     2401 ttaatttcta agattaaaat tcaacttttg gagcttcatc agcaccttcc tgagcctcaa
     2461 aatatggttt cttttcgaag ccaaacatat ttgcaagcat gtttttaggg aataatttga
     2521 tataagtatt ataatttctg gcagactcgt taaacttacg tctttctaca gcaatacgat
     2581 tttcagtgcc ttcaagctgt gcctggagtt ccaaaaagtt ttgatttgct tttaattctg
     2641 gatagcgctc aacaacaacc attaatttag agagggcgct gctaagtcca tcttgagcct
     2701 gttggaatgc tgctatttta cctggagtta gatctccggc attgatagtt gtactggttg
     2761 cttttgcacg agcatttatt acaccctcaa gcgtttcttt ttcatgtgat gcataaccct
     2821 taacagttgc tacaaggttt ggaataagat ctgcacgtcg ttgataaaca ttttcaacat
     2881 ccgcccattg tttatcaacg gtttcagaca atgtaaccat attgttataa gtacccttaa
     2941 accagctata agttataaat ccaagtatga cgattataat gattatgatc cagctttttt
     3001 tcatttttaa atgtttttat tgaattttcg gatagctaat gtaatcttat tttttaatag
     3061 tattaatatt tatatcctta taaaatattt tagacgcctg cggcaatccc aattatccca
     3121 actaataatc caacacttat gttaatggct tttacaataa taaatccttt tcgtgtttca
     3181 gcaagtaatg gtaggctccc atgtccatct tgaacaattg agttagccag taatatgcta
     3241 aatggcagac tgccagatgc aaagagaata ataaataaca aatgaggtcc cgactcagga
     3301 ataatgccaa ctaatacggc aataattaat acaatataaa tattatcacc aattatcttt
     3361 tcaaaatcta gatattgatt tacgaaatga agcaatagta gtgtgaagaa tgtccatagg
     3421 agtattcgaa caagatgttt tttaataatg tgagccttaa tatggtctgc aagaaaatga
     3481 tcgtttacag ttaacagcat caacaatgaa atacttagta ctgttataaa tgtgtatttg
     3541 atccattcag gatgaacatg tacagcttcg ggtatagata ataattctat atgaccttca
     3601 tggtcgttcc cacctacaaa caagatcgct gctaaggaac cgccaagtac aagtattaaa
     3661 attgctcgca gtgctgttaa atgtttaaag ttgtcaagga tatctttttt gttaaaacaa
     3721 aaacaatcga cctcatcggt atgaacctcc atatgctctt caccatagtt tacaatactc
     3781 ttatcttttt ttataaagat gtttacaata aatccagaag caattgcaat taagaataat
     3841 agtatactta tcaaaatggc tgtctcaggt attattgaga acaaaaaaaa tgcttcatca
     3901 ccagaagtag caatcattgc tgtggctaag gcagcagtcc caattacatt atgaatatac
     3961 aaagacacgg cagtatatgc tccaagacat cctggtatta atcctaataa tgcagctaaa
     4021 aatatttgtt tccacgtact ggttttaagt ttgtttcccc aaatcccttt tgagaataca
     4081 ttgagatatt caatgataag catcattgaa agcacaaata gagtaatcgt aagtgattgt
     4141 cgaattatgg gaaatatatc atgcataata agagtagctt attagaatga aattgcagat
     4201 gaaaacaatc atcagcgtat gaaactcaat aattattctc ctttatctca aaatacgact
     4261 gagggtgtaa acatgccggg catttttgag gggccttttc gccttcgtgc aggtatccac
     4321 agttacggca tttccaaatt attttttcat tcctttcaaa aacatgaccg tcgtttagat
     4381 tactataaag ttttagatac ctgttttcgt gagctttttc cactttagca atcattttaa
     4441 aggctacggc tacttcttta aagccttctt cttctgcaat tcttgcaaac tcaggataga
     4501 gttctgtcca ttcttcattc tcaccctcag cggcagcttt aagattatcc aatgttgtgc
     4561 caataatacc tgccggataa gtggcagtta tttcaacagg cctaccctca agaaatttaa
     4621 agaatcgttt agcatgttct ttttcattaa gtgctgtttc tgtaaataat gctgctattt
     4681 gttcaaggcc ttcttttttt gctttacttg caaaataatc atatcgcatt cgtgcctgtg
     4741 attctccagc gaatgcttta agaagattct gttctgttag tgttccttct aatgaattca
     4801 taattatttt agattgttaa aagttcaaag ttattgattt tttagtgcca aattagctcg
     4861 cttaatattt ttataggcgt ttatttaaat aacatactat ttttacgccg aattgtatca
     4921 ctaacaaaaa ctataaagta tagattatga gaagatgtat tttgattttt acaatattta
     4981 tagctgcaat ttatttagca tatggacaag ctgatggatt aactgttgct gaagaaactg
     5041 attacagttc aacttcaact tattctgatg ttattaaatt tatcgcaaat ttgcaggagc
     5101 aatcaccttt tgtaaaaatc gatacaatag cccaatcaat cgaaggccgc atagttccaa
     5161 tgatgattat tgcgaatcct ttacctgaaa atcctaaaca agttggcgac cgaattgttg
     5221 tttatattca ggcaaacatt catgccggag aagttgaagg aaaggaagcc tcactaatgc
     5281 tggcaagaga tcttcttaag aatccttcat ccgagattat gaaaaatgtc gtaaccttaa
     5341 ttgtcccaat atta
//
LOCUS       DASCQP010000453         3038 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001644974, whole genome shotgun sequence.
ACCESSION   DASCQP010000453 DASCQP010000000
VERSION     DASCQP010000453.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3038)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3038)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3038
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001644974"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(27..1274)
                     /locus_tag="QF480_07790"
     CDS             complement(27..1274)
                     /locus_tag="QF480_07790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018338535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HJN06502.1"
                     /translation="MDIFNKCTSDLGPLGQYAKQSEGYFMFPKLEGEISNYMMFEGKE
                     RLVWSLNNYLGLANHPEVRKADADAAAEWGMAYPMGARMMSGHTKYHEQLERELASFV
                     KRESAYLLNYGYQGMVSIINSMVNRKDVIVYDSEAHACIIDGMRLHFGKRFVYPHNNM
                     QNLEKELERATKIVDKTGGGILVITEGVYGMSGDLGKLDEIIELKKKFNFRLFIDDAH
                     GFGTMGPTGAGTDEHFGLQNEVDLYFGTFAKSMAGIGGFVAGSKDVITYLQYTMRSQI
                     YAKSLPMPMVIGALKRLDLLRSNPEFKEKLWTIVNALQTGLVENGLNIGATQSPVTPV
                     ILNGDVAEATQITYDLRENYNIFCSIIIYPVIPKVMIILRIIPTAVHTLYYVEYTVKT
                     FATIKRKLENKEYSKEFKERTVK"
     gene            1494..2294
                     /gene="bamD"
                     /locus_tag="QF480_07795"
     CDS             1494..2294
                     /gene="bamD"
                     /locus_tag="QF480_07795"
                     /inference="COORDINATES: protein motif:HMM:TIGR03302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0065003 - protein-containing complex
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HJN06503.1"
                     /translation="MFKKTVFLTLVAGIVALGLGCNNYSRIIKSGNNDLKFETGVDLY
                     EKGDFNKALQFFDILRAVQRGTEKGEKLTYYTANCYFQMKDYQIASYYYKQYVEMYPR
                     SEHAEESAFLTAYCNYLESPRASLDQTNTYIALRELQSFIDMYRGSTKVTEAHRLMDD
                     LRGKLEVKNYNIGRLYYRMGDYQAAITSFENLLDNYPDTDFKEEVLYSITKAYFTYAE
                     KSIESKKEQRYEKTIESYNNLLYLFPESEYLKDVEEINEDAHNSLKNK"
     gene            2304..2636
                     /locus_tag="QF480_07800"
     CDS             2304..2636
                     /locus_tag="QF480_07800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004299989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HJN06504.1"
                     /translation="MDYKKIKTELTAVTRKKEKFYDVTGNIYETVVVMSKRANQIGYE
                     IKQELEQKIEEFAPATDNLEEVFENREQIEIARYYEGLPKPTLLAVNEFLKGEIYIRN
                     PHKEKVEL"
     gene            2645..>3038
                     /locus_tag="QF480_07805"
     CDS             2645..>3038
                     /locus_tag="QF480_07805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016267211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavoprotein"
                     /protein_id="HJN06505.1"
                     /translation="MLTGKKIIIGITGSIAAYKIPFLIRLLKKAGAEVQVIMTPAALD
                     FVTPLTLSTLTERPVLINFFDKNDGTWSSHIDLGLWADMLIIAPATANTLAKMATGVA
                     DNLLLTTILSARCQIVFAPAMDLDMYKHP"
BASE COUNT         1036 a          504 c          521 g          977 t
ORIGIN      
        1 cacctatgtt tgcagcatta atctaattat ttaactgttc tttccttaaa ctcttttgaa
       61 tattctttat tttctaattt gcgtttaatt gttgcaaaag tttttacagt atactcaaca
      121 taataaagag tgtggacagc agttggaata attcttagaa taatcatgac tttaggtatc
      181 accgggtata tgataattga acagaaaatg ttataattct cacgtaaatc gtatgtaatt
      241 tgagtcgctt cagcaacatc accgtttagt attactggag taactggtga ttgcgttgca
      301 ccaatgttta acccgttttc aacaagtcca gtttgaagag cattaacgat agtccagagt
      361 ttttctttaa actctgggtt tgatcttagt aaatccaatc tttttaaagc tccaattacc
      421 attggcatag ggagtgattt tgcataaatt tgtgagcgca ttgtatattg taaatatgtg
      481 atcacatctt tactaccagc aacaaaacca ccgatacctg ccatcgactt agcaaatgtt
      541 ccaaaatata aatcaacttc attttgtaaa ccaaaatgtt catcagtacc tgcacccgtt
      601 ggacccattg ttccaaatcc atgagcatca tcaatgaaca atctgaaatt gaatttcttt
      661 ttaagttcta taatttcatc gagtttacca agatcaccag acatgccata cacaccttca
      721 gtaataacca atatcccacc acctgtttta tctacaatct ttgtagctct ctcaagttct
      781 ttctcaagat tttgcatatt attatgagga taaacaaaac gttttccaaa atgtaaacgc
      841 attccgtcaa ttatacatgc gtgtgcttca gagtcgtaaa cgataacatc tttgcggtta
      901 accattgaat taataataga aaccatacct tggtatccat aattaagaag gtaagcagat
      961 tctcttttaa caaatgaagc tagttcacgt tcgagttgct cgtggtattt tgtgtggccc
     1021 gacatcattc gtgcacccat agggtatgcc attccccatt cagcggcagc atcggcatca
     1081 gccttcctga cttctggatg atttgctaat ccaagataat tattcaaact ccaaactaag
     1141 cgttctttac cttcaaacat catgtagtta gaaatttctc cttccaattt tggaaacata
     1201 aaatatcctt cactttgttt agcatattgg cctaaaggac caagatcaga cgtgcatttg
     1261 ttaaaaatat ccattattga tttgattaaa tttgagtgac aaaaatatgg atttcctttc
     1321 attgttcaac ttaaaaggat gaaatagtgt aagcattaaa aatatgaaat tttcttcgac
     1381 agaaatatgc aaatatttaa agtttgttaa agtctgaata aattgtggtt agtgaataat
     1441 attgacataa taaatccgtt ttgtacttca ataaattatt gtaattttgc gcgatgttta
     1501 aaaaaacagt tttcttaact ttagttgctg gtatagtggc acttggcctt ggttgtaata
     1561 actattctag aattattaag agtggtaata acgacttaaa gtttgaaact ggtgtagatt
     1621 tatatgaaaa aggtgatttt aacaaagcac tgcaattttt tgatattcta agggcagtgc
     1681 agcgtgggac agaaaaaggg gagaagttaa cgtattatac tgctaattgc tattttcaaa
     1741 tgaaagacta ccaaatagca agctattatt ataagcaata cgttgaaatg tatcccagga
     1801 gtgagcatgc tgaagaatct gcatttttaa ccgcatactg taattatcta gaatcaccaa
     1861 gagcaagcct tgatcaaacg aacacatata ttgctcttag ggagctacag tcatttattg
     1921 acatgtatcg tggaagcacg aaggtaacag aggctcaccg cttaatggat gatttgagag
     1981 gaaagttgga agtaaagaat tacaatattg gaagacttta ttataggatg ggtgattatc
     2041 aggctgctat aacttcattt gaaaatcttc tagacaacta tcctgacact gattttaagg
     2101 aagaggttct ttattcaatt acgaaagcct attttactta cgctgaaaaa agtattgaat
     2161 cgaaaaaaga gcaacgttac gagaagacta tagaatcata taacaatctt ctttatttat
     2221 ttccggaaag tgaatactta aaagatgttg aagaaattaa tgaagatgca cataatagtt
     2281 taaagaataa ataattttaa tagatggact ataaaaaaat taaaacagaa ttaactgcag
     2341 ttactcgaaa aaaggaaaaa ttttatgatg ttacaggtaa tatttatgaa actgtagttg
     2401 taatgtcaaa acgtgctaac caaattggtt atgaaattaa gcaggaacta gaacaaaaaa
     2461 ttgaggaatt tgcccctgcg acggataacc ttgaggaagt ctttgagaac agagagcaaa
     2521 tcgaaatagc acgttactat gaaggcctgc caaaaccaac tttgttagca gttaacgaat
     2581 tccttaaagg agagatttat attagaaatc ctcataagga aaaagttgaa ttatagaata
     2641 tgatatgtta acgggtaaaa aaatcattat tggtataact ggtagcatag ctgcatataa
     2701 aatacctttt cttatccgtt tactgaaaaa agctggtgct gaggttcaag taattatgac
     2761 acctgctgcc ttagattttg taacaccttt aacattatca accctaactg aacgacctgt
     2821 attaatcaat ttctttgata aaaatgatgg tacatggtca agtcatatag accttggttt
     2881 atgggccgat atgctaataa tagcaccggc aactgccaat actctggcaa agatggctac
     2941 aggtgttgca gataatttgt tgttaacaac catactctct gctcgttgcc aaatagtttt
     3001 tgctcctgca atggatctgg atatgtacaa acatccaa
//
LOCUS       DASCQP010000454         1775 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001646174, whole genome shotgun sequence.
ACCESSION   DASCQP010000454 DASCQP010000000
VERSION     DASCQP010000454.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1775)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1775)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1775
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001646174"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1364
                     /locus_tag="QF480_07810"
     CDS             <1..1364
                     /locus_tag="QF480_07810"
                     /inference="COORDINATES: protein motif:HMM:NF012544.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HJN06506.1"
                     /translation="LSMKNFPALAEYDFSLVFYLSAASLLFFIPSALVSAELASGWPQ
                     SGGVYLWVKEAFGPKYGFVAIFMQWVENLPWYPAACAFVASAIAFIFEPSLAENKTFV
                     IITIWVCLWASTLLNFKGMKLSAFLSTSGVLSGTIIPGFIIIVLGVIYVVIGKDVNVD
                     FSLDALVPDFSNLNQIMLLAGMLMSIAGMEMSAVHIRNVKNPKKNYPKAIFISAIIII
                     LLSVLVSLAISIVIPDKSLSLSAGVMQAFHYFFKVFNMPWATPILSFFLAYGVFTMVI
                     TWMVGPSKGLLEVAKEGYLPRTWQKRNKNNMPVGILYVQGIASTLLALAILFMPSVSS
                     AFWLMSALAAQLYLIMYLFMFAAAIKLRYSHAEVKRDYQIPGGKTGMWIVAGIAWLAS
                     FFVIIFGFIPPDSVRSDGIMAIIGYIAFLVIGIAVLLFIPIIFFNVSKRKPSWKISGE
                     NNS"
     gene            1427..>1775
                     /locus_tag="QF480_07815"
     CDS             1427..>1775
                     /locus_tag="QF480_07815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06507.1"
                     /translation="MKRNLLILVLIASFLGITAQDIDTGEKKLSFNMSGFINLNAIFD
                     FNGLGDYDDFTTSQIPIDPTPYQDHFRFHMTARQSRLNFGINYSTPWGKLHGFVSGDF
                     YTGNTGVLSRIRLR"
BASE COUNT          516 a          287 c          353 g          619 t
ORIGIN      
        1 tattgtcgat gaaaaatttt ccagctttag ctgagtatga tttttcattg gttttttatc
       61 tgtcagcagc ttcattattg ttttttattc cttcagcatt agtctcagct gaattagctt
      121 cgggatggcc acaatcagga ggagtatatt tgtgggttaa agaagctttt ggaccaaaat
      181 atggatttgt agcgattttt atgcaatggg tggagaatct tccctggtat cccgctgcct
      241 gtgcattcgt tgcttctgct attgcattta tttttgagcc ttcactggcc gaaaataaaa
      301 cattcgtaat aattacaata tgggtgtgtt tatgggcctc tactttactg aacttcaaag
      361 gaatgaaatt atcagccttt ttaagcacct ctggtgttct ttctggcaca attatccctg
      421 gttttattat aatcgttctc ggagtgatct atgtagtaat aggtaaagat gtgaatgttg
      481 acttttcact tgatgcgttg gttcctgatt tcagtaacct gaatcaaatt atgctgttag
      541 caggtatgtt gatgtcgatt gcaggaatgg aaatgtctgc agtccacatt cgcaatgtaa
      601 agaatcctaa aaagaattac cccaaagcaa tttttattag tgcgataatt ataattctat
      661 tgtcggtact ggtttcttta gcaatttcaa tagttattcc agataaaagt ttgagtttaa
      721 gtgcaggggt tatgcaggca ttccactatt ttttcaaagt gtttaatatg ccatgggcaa
      781 caccgatttt aagtttcttt ctggcttatg gggttttcac catggttatt acatggatgg
      841 taggcccatc aaaggggctt cttgaagttg caaaagaagg ttatctgccc agaacctggc
      901 aaaaaagaaa taaaaataat atgcctgttg gcattcttta cgttcaaggt atcgcttcta
      961 cactacttgc acttgccata ttgtttatgc catcagtaag cagtgccttt tggcttatga
     1021 gtgccctagc agcccaacta tacttgataa tgtatctttt tatgtttgcc gcagcaataa
     1081 aattaaggta ttcacatgct gaggtaaaaa gagattatca aataccagga ggaaaaaccg
     1141 gaatgtggat tgtagcaggt attgcctggt tagcctcctt ttttgttatt atttttggct
     1201 ttatcccccc ggattcggta agaagcgatg ggattatggc tatcatagga tacattgctt
     1261 ttttagtaat aggaattgca gtactcttat tcattccaat tatattcttt aacgttagta
     1321 agcgtaaacc tagttggaag ataagtggag aaaataattc gtagtatatt tctttgttgg
     1381 attaagagat caataataaa tataaaccat ataaaaattt aataaaatga aacgtaattt
     1441 actgatttta gtcttgatag caagtttttt aggtataaca gcacaggata ttgatactgg
     1501 ggagaaaaaa ctttcattta acatgagtgg ttttataaac ctcaatgcaa tttttgattt
     1561 taacggatta ggtgattatg atgactttac tacttcccaa ataccaattg atccgacacc
     1621 atatcaagac catttcaggt ttcatatgac agccagacaa tcaagattaa attttggaat
     1681 taactatagt acgccgtggg gcaaactgca tggctttgta tctggagact tttacacagg
     1741 taataccggt gtgctatcga gaattagact tagag
//
LOCUS       DASCQP010000455         2036 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001652692, whole genome shotgun sequence.
ACCESSION   DASCQP010000455 DASCQP010000000
VERSION     DASCQP010000455.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2036)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2036)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2036
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001652692"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1033
                     /locus_tag="QF480_07820"
     CDS             <1..1033
                     /locus_tag="QF480_07820"
                     /inference="COORDINATES: protein motif:HMM:NF021982.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN06508.1"
                     /translation="EYVLYIPASYTGDSPVPMVLNFHGYGSTANEQMWYGDFRPISDT
                     AGFIIAHPQGTLFNGTTHWNVGGWTIGSTTDDVGFTDALLDTLAVNYNIDSTRVYATG
                     MSNGGFMSFLLSCQLSERIAAIGSVTGSMTPETYDNCTPMHTMPILQIHGTDDGVVPY
                     TGAAWSESIDNVLQYWVGVDNCNITPTITSLPDLDPNDGSTVEHYVYEGGDNNVTVEH
                     YKVIGGGHTWPGNTFGGSGTNNDINASEEVWKFFSRYNLTNITGTEQLVEDNLQIVIY
                     PNPTNSYITIELNFSNQMDYEIISSLGHIVIRGVIRSNNQQIDLSQLVPNIYFLNIEG
                     RFYKILKTK"
     gene            complement(1106..>2036)
                     /locus_tag="QF480_07825"
     CDS             complement(1106..>2036)
                     /locus_tag="QF480_07825"
                     /inference="COORDINATES: protein motif:HMM:NF025499.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4301 family protein"
                     /protein_id="HJN06509.1"
                     /translation="VSPEHQHKFENAVKAKKGKFEQKYDVDFDINFSQQKPNTDIIAV
                     TPDNKPARDVEGDLLFRPGGHGALIENLNDLVGEIVFIKNIDNIVPDRLRDQTYLYKK
                     VIGGLLFKLQAKTFEFLDLLDGGYLTDEELEDVLYFAQNELNIFIPDAYYGFDQMDKI
                     DFLFNKLNRPIRVCGMVKNEGEPGGGPFWVIDKDDNLSLQIVESTQMDLNNEAQKEII
                     SKATHFNPVDLVCGVKNYKGENFNLKEYIDPNTGFISSKSQGGKSIKAQELPGLWNGA
                     MADWITIFVETPIITFNPVKTINDLLRPQHQPE"
BASE COUNT          654 a          341 c          350 g          691 t
ORIGIN      
        1 agagtatgtt ctttatatac cagcaagtta cacgggggat tctccggtac ctatggtttt
       61 aaattttcat ggatatggaa gtactgccaa tgagcaaatg tggtatggag attttcgccc
      121 aatttctgat actgcaggat ttattatagc tcatccacaa ggaacattat ttaacggaac
      181 tactcattgg aatgtaggag gatggactat aggaagcacc actgatgatg ttggttttac
      241 agatgcttta cttgacacat tagcagtcaa ttataatata gattcaacaa gagtttatgc
      301 cacaggaatg tcaaatgggg ggtttatgag ttttttattg tcatgtcaat tgagtgaaag
      361 aattgctgct attgggtcag ttacgggatc aatgactccc gaaacctatg ataattgtac
      421 tccaatgcac actatgccaa ttttgcaaat tcatggcact gatgatggtg tagtacctta
      481 cactggcgca gcatggtcgg agtcgataga caatgttcta caatattggg ttggggttga
      541 taattgtaat attacaccta caattacaag tttacctgat ttagatccaa atgacggaag
      601 tacagttgag cattatgttt atgaaggagg tgataacaat gtaacagttg agcattataa
      661 ggtaatagga ggtggacata cttggccagg taatactttt ggaggtagcg gaacaaataa
      721 tgatatcaat gcttcagaag aagtatggaa attcttttca agatataatc ttactaacat
      781 tacaggcact gaacaattgg ttgaagacaa tcttcaaata gttatttatc ctaatccaac
      841 taattcctat ataactattg agctaaattt ttcaaatcaa atggattatg aaataatttc
      901 ctcattggga catatagtta ttcgtggagt gattagatca aataatcagc agattgattt
      961 atcacaacta gtaccaaata tttattttct aaatattgag gggcgattct ataagatatt
     1021 gaaaacaaag taatgaaatt ggttatccga caacttgtta tcaattaatc tcaaaaataa
     1081 gtactactga tcttaatttt aattgctatt ctggttgatg ttgtggtctt aataaatcat
     1141 taatagtttt aacggggtta aatgttatta tcggtgtctc aacaaaaatt gtaatccaat
     1201 cagccatagc accgttccat aatcctggta gttcttgagc ttttattgat ttgccaccct
     1261 gagatttcga tgaaataaaa cctgtatttg gatcaatata ttctttcaga ttaaaattct
     1321 ctcctttata gttttttact ccgcatacta aatccacggg gttaaaatga gtagccttgg
     1381 aaattatttc tttttgtgct tcattattca ggtccatttg agttgactca acaatttgta
     1441 atgacaggtt atcatcttta tcaattaccc aaaatggacc acctcctggc tcaccttcat
     1501 tcttaaccat tccacaaacc cgaattggtc tgtttaactt gttaaataaa aaatcaattt
     1561 tatccatctg atcaaatcca taataggcat caggaataaa aatatttaac tcattttgtg
     1621 caaaataaag aacatcttcc aactcttcat ctgttaaata accgccatca agtaaatcga
     1681 gaaactcaaa agttttggct tgcaatttaa atagcaaacc gccaattact tttttataga
     1741 gataggtttg atcccttaat ctatcaggaa cgatattgtc aatattttta ataaaaacta
     1801 tctctccaac cagatcgttt aaattctcaa taagtgcccc atgtccacca ggtctaaaaa
     1861 gcaagtcacc ttcaacatct ctagcaggct tattgtcagg tgttacagca attatgtctg
     1921 tatttggttt ttgctgtgag aaattaatat caaaatcgac atcgtacttt tgttcaaatt
     1981 ttcctttttt ggctttaact gcattttcaa atttgtgttg atgctctggt gaaaca
//
LOCUS       DASCQP010000456         2177 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001658077, whole genome shotgun sequence.
ACCESSION   DASCQP010000456 DASCQP010000000
VERSION     DASCQP010000456.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2177)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2177)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2177
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001658077"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            495..584
                     /locus_tag="QF480_07830"
     tRNA            495..584
                     /locus_tag="QF480_07830"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:529..531,aa:Ser,seq:tga)
     gene            807..>2177
                     /locus_tag="QF480_07835"
     CDS             807..>2177
                     /locus_tag="QF480_07835"
                     /inference="COORDINATES: protein motif:HMM:NF015983.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HJN06510.1"
                     /translation="MRILLIPPKNNYHNVMPCYDIVGQGFPYIAGALKTAGHKIFGLN
                     INYEWCLPTAKEYLKKRVEEAVRIHNPEIICVGGMSPDFYFVQHTIEFIRAISPNIII
                     ICGGPMVTYDYEFIFSTLNPDYAIIGEGEESIVLLIEQLKNKESLSSIPGLIYKLNEK
                     TIVSDLIYAQVKDLNALTFPEYSIFCIDDYLNDLKQTNHNYFYTHTNPNPRLMPLNMA
                     RGCPFRCTFCCHDYGPKYRSRSIDSVMKEIEYLYDNFKFNFLFIYDELFAKGSMNGLC
                     DGIMKFKKERNIDFSWTCDFRVPDVKPEMLNKMKTTGCSFIGFGLESASPRVLKSMNK
                     RVKVEQIHRAIKLSEEVKIGVQGNFIFGDPAETPETINETFDFYEKWCADHNIYFGHV
                     TPYPGSQLFEYCLKNKIVDNRFELYSKLKTFGHRAFNMTQMETNSFHRHVDKLLAIHS
                     PVDTHKE"
BASE COUNT          719 a          398 c          425 g          635 t
ORIGIN      
        1 tttttcataa cccctacaat ccggccttat aagcggtagt aaccgcctgt gttgcacttt
       61 cgaccagccg gataggtgcc ctagtggcgc ctcaaaacgg tggggtgaca gagtccggct
      121 taatgtacca gtcttgaaat acaacgaaaa tccaataaaa accaaataaa tcgttggaaa
      181 tcaagtagta caaacctgaa gatttagtat ttccaagaat accgagagga ggacttcggg
      241 acttgattat tgacgcagat ttgagataca cgcaaaacgg agataaacgg gactcaaaat
      301 cactccgtca cttctacata atgcaaggac ttgcaaacaa aacacctcct aaagcgatgt
      361 gtatccaatg tgatgtttca cctacaataa tgaaaaacca ctacgagcgt catgcgacgg
      421 tagatttatt caaggatgat ttactaaagg ttggtgattt ccaatcgccg taacactggt
      481 aaaatacaca caacggtagg gtatccaagc ggctgacgga actggtcttg aaaaccagca
      541 agggggcaac tccttcgtgg gttcgaatcc cacccctacc gccaaacact acttttatta
      601 tttgagatac ggaaaaactc tacagcgaaa aatcctaccc tcggttattt tttgaggatt
      661 ttatttgagg tcgggaaagt ctggagcata aaaaccatta ttcccatacc tcaagacatt
      721 agattggtat cactttactc aatagggagg tctgtctgtt tgttttttta tgtaacggat
      781 taggtgagta aagacacgtg taggtcatgc ggatactact gattccaccg aaaaataact
      841 accacaatgt tatgccttgt tatgacattg tagggcaagg gtttccttat atagctggcg
      901 ctttaaaaac tgcgggccac aaaatatttg gcctgaatat aaattatgag tggtgtcttc
      961 ctaccgctaa ggaatatcta aagaaaagag tagaagaagc cgtaagaata cataatcctg
     1021 aaataatttg tgttggtggt atgtctcctg atttctactt cgtacaacat actattgagt
     1081 ttatacgtgc aatatcaccc aacataataa taatctgtgg cggccccatg gttacttatg
     1141 attatgaatt tattttttcc actttaaatc cagactatgc aattattggt gaaggggaag
     1201 agtcaattgt tttactaata gaacaattaa aaaacaaaga atctctgtca tctatccctg
     1261 gactaattta taaactaaac gaaaaaacca tagtcagtga tttgatatac gcccaagtta
     1321 aagatctaaa tgctctcaca tttccagaat attcaatttt ttgcatagat gattatctga
     1381 atgatctgaa gcaaaccaat cataattatt tctacactca taccaaccca aatcctaggt
     1441 tgatgccact caacatggct cgaggatgtc catttagatg tacattttgc tgtcatgatt
     1501 acggtccaaa atacagatca agatctatag atagtgtgat gaaggaaata gaatatctat
     1561 atgataattt caaatttaat ttcttgttta tctatgatga gctttttgcc aaaggaagta
     1621 tgaatggact ttgcgatggc ataatgaagt tcaagaaaga aaggaatatc gatttttcgt
     1681 ggacatgcga cttccgtgtt cccgatgtta aaccggaaat gttaaataaa atgaaaacta
     1741 ccggttgctc ttttattggt tttggcttgg agtcagcaag cccaagagta ttaaaaagta
     1801 tgaataaaag agtaaaagtt gaacaaatac atagggctat aaagctttct gaagaggtaa
     1861 agataggtgt tcagggaaac tttatttttg gggacccggc agaaactcct gagactataa
     1921 atgaaacttt tgatttttat gaaaaatggt gtgctgatca taatatctat tttggccatg
     1981 tcacaccgta tccaggcagt cagttgtttg aatattgtct gaaaaataag attgttgata
     2041 ataggttcga attatattcc aagcttaaaa cttttgggca cagggcattt aatatgaccc
     2101 agatggagac aaattccttt catcgccatg tcgataaact attggcaatt catagtccag
     2161 tcgatacaca caaagaa
//
LOCUS       DASCQP010000457         1965 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001663664, whole genome shotgun sequence.
ACCESSION   DASCQP010000457 DASCQP010000000
VERSION     DASCQP010000457.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1965)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1965)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1965
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001663664"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..943
                     /locus_tag="QF480_07840"
     CDS             <1..943
                     /locus_tag="QF480_07840"
                     /inference="COORDINATES: protein motif:HMM:NF013740.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HJN06511.1"
                     /translation="IYHPIDWLKKKGVNGILSILIVVFGLLIVLFLMGGAVTRSIIQF
                     SQNLPFYKKELHDITKSSITFLNGYGLNISTETVIDNFNAGSVFGYATKFITGIGGLL
                     GQIILLILVAAFILGETNSYPIKLKVVLSDPDLSLGNITVISRNIRYYLGIKTLTGLF
                     AGTCVTIILLVMGIKFAIIWGILVLLMRYIPNIGSIIAAIPIFLFVLIQQGLEGVLYI
                     GIGYSAVNFIVGQIIEPKFFGKGMNLSTLVVFLSLVFWGWTLGDVGMLLSVPITMAMK
                     ISLETRENSRWMAVMLGSERSAIEALSKKNNKKGQPE"
     gene            complement(979..1944)
                     /locus_tag="QF480_07845"
     CDS             complement(979..1944)
                     /locus_tag="QF480_07845"
                     /inference="COORDINATES: protein motif:HMM:NF024806.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HJN06512.1"
                     /translation="MSILKRSLLLVSMVMLTVAVMAQSVEDAGAKYNEGNEFYKEKDY
                     SNAVTAYEAALNTANETGADADDLKGSIEKQLMNAYYKNGLAQYKGRKFDAAIAFLEK
                     GYAFGEKLNDASMKKKTSTYIAKVRTSKGNSLLKSNKINEAFAEYEMATEILPNYPNA
                     YYGKGMVYKAKDDMANMMVNMDKAIELGAGNPKAAKIAKKAKSTTAKALVNAGAKEIQ
                     KEHGKKATEYIVSSFNYNPGNAKAYYYLTLAYNNTKNWDKAIEAANKAIGMETDNKSD
                     MYFALGQAYEGKNDAAGACNAYKNVTSGANVEVAKYQITQVLKCS"
BASE COUNT          573 a          345 c          329 g          718 t
ORIGIN      
        1 tatttatcac cctatcgact ggttaaagaa aaaaggtgta aatggtatat tatcaatatt
       61 aattgttgtt tttggtttac taatagtatt gttcttgatg gggggagctg ttacaaggtc
      121 aataattcaa ttctctcaaa atttaccttt ctataaaaag gaacttcatg acattacaaa
      181 atcttcaata acattcttaa acgggtacgg attaaatatt tcgactgaga ccgttattga
      241 taattttaat gcaggcagtg tttttggcta tgctactaaa tttattacag gaattggagg
      301 cttgttaggc caaataatac tcctaatact tgttgctgct tttatacttg gagaaacaaa
      361 tagctatcct attaaattaa aagttgttct aagtgacccc gatttatcat tgggaaatat
      421 aacagttatt tcaagaaaca taagatatta tttaggaata aaaactttaa caggattatt
      481 tgcaggaacg tgtgtaacaa taatattact cgtaatgggc ataaagtttg ctattatctg
      541 gggcatcttg gtgttgttaa tgcgatatat accaaacatt ggatcaataa tagctgcaat
      601 tcctattttc ctatttgttc ttattcagca ggggctggag ggagtacttt acataggtat
      661 tggctactca gcagttaatt ttattgttgg tcagataatt gaacccaaat tttttggaaa
      721 aggaatgaac ctaagtactt tggtagtatt tctctccctt gttttttggg gatggacctt
      781 aggcgatgtg ggtatgttat tgtctgttcc gattacaatg gcaatgaaga ttagtttaga
      841 gacccgtgaa aactcaagat ggatggcagt aatgcttggt tcagaaagga gcgcgattga
      901 agctttatct aaaaaaaaca acaaaaaagg gcaacccgaa taacttagat tgcccttgac
      961 taaactttag tatattttct aactacactt aagtacttgt gttatttgat attttgctac
     1021 ttcaacgtta gcgcctgaag taacattttt ataggcatta catgcacctg cagcatcatt
     1081 tttaccttcg tacgcctggc ccagtgcaaa atacatgtct gatttattgt ctgtttccat
     1141 accaattgcc ttattggcag cttcaatagc tttatcccaa tttttagtat tattatatgc
     1201 cagagtaaga taatagtatg ccttagcatt cccgggatta taattaaatg aactaactat
     1261 gtactcggta gcctttttgc catgttcttt ttgaatctct ttagcaccag cattaacaag
     1321 tgcctttgct gtagttgatt tggctttttt agctattttg gcagctttag ggttacctgc
     1381 tcccaactcg attgctttat ccatgttaac catcatattt gccatatcat ctttagcttt
     1441 gtaaaccatt cctttgccat aatatgcatt aggatagttt ggcagaattt cagtggccat
     1501 ttcatactcg gcaaacgctt cattaatttt gttacttttt aataatgagt taccttttga
     1561 ggttctaacc tttgcaatgt atgtacttgt tttctttttc atcgaagcat cattcaactt
     1621 ctcaccaaac gcataaccct tttcaagaaa tgcaatagca gcatcaaatt tgcgaccttt
     1681 atattgtgct agcccgtttt tataatatgc attcattaac tgcttttcaa tgctaccttt
     1741 tagatcatca gcatctgccc cggtttcatt tgcagtatta agagcggctt catatgcggt
     1801 tacagcatta ctgtagtctt tttccttata aaattcattt ccttcattat atttagcacc
     1861 tgcatcttca acagattgtg ccataacagc aactgttaac attaccatac tcaccaacaa
     1921 taatgatctt tttagtatac tcattgtatt aaattattag tttaa
//
LOCUS       DASCQP010000458         5109 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001667344, whole genome shotgun sequence.
ACCESSION   DASCQP010000458 DASCQP010000000
VERSION     DASCQP010000458.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 5109)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5109)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5109
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001667344"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            50..598
                     /locus_tag="QF480_07850"
     CDS             50..598
                     /locus_tag="QF480_07850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06513.1"
                     /translation="MKKLVRLFIGLFLIGIVLTGCQEAKEILNVKFNADYQTEFDVVV
                     PPSKGTNFSINSVFAVSETIDPTSNPDFQLYIDKILEISIEEVKGEVLSISKNVILES
                     ALISVTNENHNASWEFTNEAIMVGTVLTLDNNSGQWDAIENILLDKKVLTVSVSGQVD
                     EDDVEFEVRFSLKSDVIANPLD"
     gene            705..1385
                     /locus_tag="QF480_07855"
     CDS             705..1385
                     /locus_tag="QF480_07855"
                     /inference="COORDINATES: protein motif:HMM:NF027640.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4956 domain-containing protein"
                     /protein_id="HJN06514.1"
                     /translation="MNDRWGLFQKFLITQEQQVSLSDFLINSLVIIVLAIILEYTYVR
                     AARTISNRKQFAGTFLLIAFTTMLIISIVKTSLALSLGLVGALSIVRFRAAIKEPEEL
                     SYIFFAIALGLGLGANQTIVVIEAFAIAMVIIWVRYFISGKSTRQNLYLNISAKAGEV
                     ELKQVIDIVKREFGKFHLKRYDESNQIIEASFMVDSPKPEKLQSLTESLSKLGSDTRV
                     SFVESKSF"
     gene            1419..2123
                     /locus_tag="QF480_07860"
     CDS             1419..2123
                     /locus_tag="QF480_07860"
                     /inference="COORDINATES: protein motif:HMM:NF020916.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VTC domain-containing protein"
                     /protein_id="HJN06515.1"
                     /translation="MYFPPFNFEKSRFERKFAVKDMYYHEIVQQIRNNRAAFLSIYHP
                     RYINNIYFDTNDMDFYSDNVSGKGSRKKVRIRWYGNLMGNISHPVLEFKMREGMVGNK
                     LSFPLKSFSLDESFTGDYIQDILRLSELPDWVNSVMLMIKPALLNCYHRQYFISFNNN
                     FRVTLDNKLSYFSIGNGVNNFIKKHTNDDVIVELKYDNQHDGKDAAYVTNDLPFRLTK
                     SSKYVNGFEMLHPMVT"
     gene            complement(2151..4634)
                     /locus_tag="QF480_07865"
     CDS             complement(2151..4634)
                     /locus_tag="QF480_07865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013444063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008784 - alanine racemase activity
                     [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0006522 - alanine metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine
                     ligase/alanine racemase"
                     /protein_id="HJN06516.1"
                     /translation="MQHNDYTGLEVAEIIQSKLVSAKPDSIIISDILIDSRRLITAHS
                     TLFFALVTNKNDGHNYIGSLHKQGIRYFVVSNLSDEILKLPETSFFVVDNTLTALQLL
                     TASHRKQFKVPVIGITGSNGKTVIKEWLYQLMNEDKKIVRSPKSYNSQIGVPLSVWQM
                     NEKHELAIFEAGISEPEEMQKLQSIINPDIGIFTNIGQAHNENFINTTQKTGEKLNLF
                     KKVNTLIYNIDHKEVHGAVIRSGILENITTFCWGKDSTCNLEISEIVIKDQNSTIHGF
                     CFNKKLDITIPFTDQASIENAIHCWATMLYLGYNNEIIKSRMLELASVAMRLELKAGI
                     NNCTIINDAYNSDFNSFAIALDFMNQQNHHHEKVVVLSDIMQSGQDSIDLYTNVANLV
                     RNKNVHKFIGIGSSISKQADKFDMESYFFETTDDFIKNYSFANFVNQTILLKGARVFE
                     FEKLSRILQQKAHETVLEVNLNNLIDNLNQFRLKLKPTTKIMAMVKAFSYGAGSLEIA
                     NVLQYHNVDYLAVAYADEGIELRQAGINVPIMVMSPEEQAFDTMIRHQLEPEIFSFRT
                     LSLLETTIKRIALPQNKPVKIHIKIDTGMHRLGFMQSDVPELLNRLSDNPLIYIQSVF
                     SHLVASDNSSFDDFTKKQIDILDGIKKLFKQKIDHQVLFHIANSEAINRFSESHMDMV
                     RIGIGLYGITKNMTGLESVLILRSILGQIKLVRKGESVGYNRSWIAPDDTRIGIISIG
                     YADGMLRSLGNGKASLYVKGKPVPVIGDICMDMCMVDLTGIDAEENEDVIIFNNEHSV
                     TKLAEAGNTIPYEILSRISRRVKRIYFHE"
     gene            complement(4641..>5109)
                     /locus_tag="QF480_07870"
     CDS             complement(4641..>5109)
                     /locus_tag="QF480_07870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005646528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HJN06517.1"
                     /translation="LGLNPHAGEYGTIGLEDKNIISPAIIAAKTNGLLVFGPFAADSF
                     FANEYTKYDAVLAMYHDQGLIPFKTLAFEDGVNYTAGLPYVRTSPAHGTAYNMAGRNV
                     ASPESIRSAMYLAVDIYQNRQRYAEMNKNPLGYNLLNDVKNGENNKEVNSSEE"
BASE COUNT         1657 a          893 c          846 g         1713 t
ORIGIN      
        1 aataataatt tagcagaata actgtattaa gtacttaaat attagtaaga tgaaaaagtt
       61 agtaagatta tttattggat tattcttaat cggaattgta ctcacaggtt gccaagaggc
      121 aaaagaaatt ttaaatgtca agtttaatgc agattatcaa acagagtttg atgtggttgt
      181 acctccttca aaaggaacta acttcagcat taacagcgtg tttgcagtaa gtgaaaccat
      241 tgatcctaca agcaatcccg acttccagct ttatattgac aagattctgg aaataagcat
      301 tgaggaagtt aaaggtgagg ttctaagtat tagcaaaaat gtaatactcg aatcagctct
      361 aataagtgtt acgaacgaga atcataatgc cagttgggaa tttacaaatg aggctatcat
      421 ggttggaacc gtattaacat tagacaacaa ctccggacaa tgggatgcaa tcgagaacat
      481 cctgctggac aaaaaagttc ttactgtttc agtttcggga caagtggacg aagatgatgt
      541 ggaatttgaa gtccgttttt cgcttaaatc agatgttatt gccaatcctc tggattaaga
      601 tgcaatattt agtagtggaa gagtcgttga aataatgacc ttgcataggt cttgtttttt
      661 tataaatttg caatctctaa ttttatatca aaatatcaat cataatgaat gacaggtggg
      721 gattatttca aaaatttctg ataactcagg agcaacaggt atcactgagc gatttcttaa
      781 ttaattcgct agtcatcata gtacttgcaa taattttgga atatacgtat gtaagagctg
      841 cacggactat atcaaacaga aaacagtttg ccggtacttt tttgctcatt gcttttacaa
      901 caatgctaat tatttcgatt gttaaaacat ccttggcatt gtcactcgga cttgttggtg
      961 ctttatcaat tgttaggttt agagctgcca ttaaagaacc tgaagaatta tcctatatct
     1021 tttttgctat tgcactaggt ttgggcttag gcgctaacca aacgattgtt gttattgaag
     1081 ctttcgccat tgcgatggtt attatttggg taagatattt tatatcagga aaaagcacaa
     1141 ggcagaattt gtacttgaac atttctgcaa aagctggtga agtagaacta aaacaggtta
     1201 tagatattgt taaacgtgaa tttggtaagt tccatctaaa aaggtacgat gaaagcaacc
     1261 agataattga agcctctttt atggttgatt cacctaagcc tgagaagtta cagtctctta
     1321 ccgaaagctt atcaaaacta ggtagtgaca cacgtgtttc atttgttgaa agcaaatctt
     1381 tttaatttgt tctgctaaat atctcacaat tcttatctat gtactttcct ccttttaatt
     1441 ttgaaaaaag tcgttttgag agaaagtttg ctgttaagga tatgtactac catgagattg
     1501 tgcaacagat tagaaataat agagctgctt ttttatctat ctatcacccg cgctatatca
     1561 acaatattta cttcgataca aacgacatgg acttttattc tgataatgta tctgggaaag
     1621 ggagtcgtaa aaaagtccga ataagatggt acggcaattt aatgggcaat atttcccatc
     1681 cagtacttga attcaaaatg cgtgaaggta tggtaggaaa taaattgtca tttccgttaa
     1741 aatcattttc acttgacgaa agttttactg gtgactatat tcaagatatt cttcgattat
     1801 cagagctacc tgattgggta aattcagtaa tgttaatgat aaaacccgca ctactaaatt
     1861 gttaccacag acaatatttc attagcttta ataataattt tcgagtaaca ctcgataaca
     1921 aattaagtta ttttagtatt ggaaatggag ttaataattt tattaaaaag catacaaacg
     1981 acgatgttat tgtagaactc aaatacgata atcaacatga tggaaaagat gccgcttatg
     2041 ttacaaacga tctaccattt agattaacta aaagttcgaa gtatgtaaat gggtttgaga
     2101 tgttacaccc aatggtaact tagtattaat ttttttgtct gacttgtcag ctattcatga
     2161 aaataaatac gttttaccct tcgtgatatc ctacttaata tttcataagg tatagtattt
     2221 ccagcttcag ctaacttagt aactgaatgc tcattattaa aaataatcac atcttcattt
     2281 tcttcagcat caatacccgt aaggtcaacc atacacatat ccatgcaaat gtcaccaata
     2341 acaggaacag gtttcccttt tacatataaa gaagcttttc cgttacccaa cgaccttaac
     2401 atgccatcag cataacctat ggatataata ccgatcctgg tatcatctgg agcaatccaa
     2461 cttcgattat aacctacact ctctcccttt ctaactagtt taatctggcc caatattgat
     2521 ctcaatataa gaacactctc caagcctgtc atattttttg ttatgccata taatcctatc
     2581 ccgatcctaa ccatgtccat atgactttcc gaaaatcggt ttatggcttc tgagttagct
     2641 atatgaaaca agacttgatg atcaattttt tgcttaaaaa gtttttttat tccatctagt
     2701 atatcaatct gttttttagt aaagtcatca aaagaggaat tatcgctagc taccaaatgc
     2761 gaaaaaactg attgaatata aataagcgga ttatcgctaa gtctatttaa caactctggc
     2821 acatctgatt gcataaatcc aaggcgatgc ataccagtat caatcttaat atggatttta
     2881 acaggtttgt tttgaggtaa agcaattctt tttatagtcg tttccaggag acttagtgtt
     2941 ctaaaactaa aaatttccgg ttcaagctga tgacgaatca ttgtgtcaaa ggcttgctct
     3001 tcaggactca taaccattat tggcacattt atacctgctt gtctaagctc aataccttca
     3061 tcagcatagg ctacagcaag ataatcaaca ttgtgatatt gaagtacgtt tgcaatttcg
     3121 aggctgccgg caccataaga aaaagctttc accattgcca ttatcttcgt tgttggttta
     3181 agcttgagtc tgaattggtt gaggttatct atcaaattgt ttaagtttac ctcaagcaca
     3241 gtttcatgag ctttctgttg taaaattcgg ctcagctttt caaactcaaa cacgcgagca
     3301 ccttttagca gtattgtttg atttacaaag ttcgcaaatg aataattttt aataaaatca
     3361 tcagttgttt caaaaaagta cgactccatg tcaaacttat ctgcctgctt gctaattgaa
     3421 gatccaatac caatgaattt atgaacattt ttatttctca ccaaattagc aacattagta
     3481 taaaggtcaa tgctatcttg cccgctttgc ataatatctg acaaaacaac tactttttca
     3541 tgatgatggt tttgctgatt cataaagtca agggctattg caaacgaatt aaaatcagag
     3601 ttataggcat cattaataat tgtgcaatta ttaattcccg cttttaattc caatcgcata
     3661 gcaaccgatg ctaattcaag catcctcgat ttaataatct cattattgta acctagataa
     3721 agcattgttg cccaacaatg aatagcattt tcaattgatg cttgatcggt aaatggaata
     3781 gtgatatcca attttttgtt gaaacagaaa ccgtgaatag ttgagttttg gtctttaatt
     3841 acgatttcac taatctctaa attgcaggta ctatcttttc cccaacaaaa agtagtgata
     3901 ttctctaata taccggatcg aataacagca ccatgaactt ccttatgatc aatattataa
     3961 ataagtgtat ttactttttt aaacagattt aatttctcac ctgttttttg tgtggtgtta
     4021 atgaaatttt cattatgtgc ctgacctata ttagtaaaga taccaatatc agggtttata
     4081 atcgattgaa gtttctgcat ttcttcaggt tcagaaattc cagcttcaaa tattgcaagt
     4141 tcatgttttt cgttcatctg ccaaaccgaa agtggaacac caatctgcga attgtaactt
     4201 ttaggacttc taactatttt cttgtcctca ttcatcaatt gataaagcca ttctttaata
     4261 acagttttac cattgcttcc ggttatgcct attactggaa ctttaaattg ctttcgatga
     4321 ctggcggtta ataactgaag tgctgtaaga gtattatcaa caacaaaaaa agaagtctcg
     4381 ggcagtttta aaatttcatc actaagatta cttacaacaa aatatcttat accctgttta
     4441 tgtaaactcc cgatataatt atgcccatca tttttattag tgaccaacgc aaaaaacaaa
     4501 gttgaatgag cggtaataag tcttctgcta tcgataagaa tatcacttat aatgatggaa
     4561 tcaggtttag cagacactaa ctttgattgt ataatctccg ctacctcaag acctgtataa
     4621 tcattatgtt gcatatgaaa ttattcctcc gaggagttta cttctttatt attttcacca
     4681 ttcttcacgt cgttaagcag attatatccg agtggatttt tattcatttc cgcatatctc
     4741 tgacggttct gataaatatc aactgcaaga tacatagcac ttctaataga ttcaggggaa
     4801 gcaacatttc ttccagccat gttataagca gtaccatgtg caggggaggt tcgtacataa
     4861 ggtaatccgg ctgtataatt tacgccatct tcaaaggcga gagttttaaa aggaattaaa
     4921 ccctgatcat gatacatggc caaaacagca tcgtatttag tgtattcatt agcaaaaaaa
     4981 ctgtcggcgg caaaaggacc aaaaacaagt agtccatttg tctttgctgc aattatggca
     5041 ggcgatataa tatttttgtc ttccaatcct atagtcccat attcaccagc atgaggattt
     5101 aatccaagt
//
LOCUS       DASCQP010000459         4143 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001672052, whole genome shotgun sequence.
ACCESSION   DASCQP010000459 DASCQP010000000
VERSION     DASCQP010000459.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4143)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4143)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4143
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001672052"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..725)
                     /locus_tag="QF480_07875"
     CDS             complement(<1..725)
                     /locus_tag="QF480_07875"
                     /inference="COORDINATES: protein motif:HMM:NF015651.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase
                     domain-containing protein"
                     /protein_id="HJN06518.1"
                     /translation="MYRSFSSDTFSFLTFTWHTVFYILIALVMMAIRDLAYIYRLIVL
                     TDSDIGWRQAFNVIMLWEFSSAISPSVVGGTGPAIFFLYKEGLSAGKSTAVVLTAIFL
                     DEIFFIITVPIVYFIFGTNIFPPESVSIDKIIYAFYGGYIVIFVYTLFLTYALFINPH
                     LFKSLISWVFLFPILTRWRLRARKSANQLIQTSRSIKNKPALYWIKSFTATILAWTGR
                     YWVVNFMLIAFFADRYSVADHFL"
     gene            1033..1452
                     /locus_tag="QF480_07880"
     CDS             1033..1452
                     /locus_tag="QF480_07880"
                     /inference="COORDINATES: protein motif:HMM:NF012241.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HJN06519.1"
                     /translation="MNLVRFNHPGFSHFFENFEKTHNGVCNETKGNMPSVNTIENDKD
                     FILEIAAPGLKKDEFKINLENQTLTVSREVKEEKKEKKENYTRREFVYGNFSRSFTLP
                     KSIMFDKIAADYNDGILKLTLPKKEKEAKLSREINIS"
     gene            complement(1514..2323)
                     /gene="zupT"
                     /locus_tag="QF480_07885"
     CDS             complement(1514..2323)
                     /gene="zupT"
                     /locus_tag="QF480_07885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019130000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc transporter ZupT"
                     /protein_id="HJN06520.1"
                     /translation="MDWNTIAFAFGLTLFAGLSTGVGSAIAFFAKKTDTGFLSLALGF
                     SAGVMIYVSFVEIFVKARIELTSELGSTQGYWVTTAAFFGGILFIAIIDKLIPSVENP
                     HEMHKVEEMAIDKPKDSAKLMRMGLFTALAIAIHNFPEGLATFTAALTDPHLGIAIAV
                     AIAIHNIPEGIAVSIPIFYATGSRKKAFWLSLSSGLAEPVGAIIGFLILMPFLSPTLF
                     GVLFASVAGIMVFISLDELLPAAEKYGEHHLSIYGLIVGMGVMAISLLMFA"
     gene            complement(2370..2684)
                     /locus_tag="QF480_07890"
     CDS             complement(2370..2684)
                     /locus_tag="QF480_07890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06521.1"
                     /translation="MKKEVFKYNEPLKSDYESLSRNELEIRRHAFISNLLINDFEKLC
                     NLIYRHDVSETKFNIALQLSDIDTQAWKITHLVIDREMHKVKTRRVYKENKDMKNRES
                     IE"
     gene            2785..3450
                     /locus_tag="QF480_07895"
     CDS             2785..3450
                     /locus_tag="QF480_07895"
                     /inference="COORDINATES: protein motif:HMM:NF015506.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0031992 - energy transducer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HJN06522.1"
                     /translation="MRKRKNKKSELESKKLIFFQVGLVIALLSVLYAFEYKSYEKYEI
                     PEFSNRDMEVDWEIIIPTKHKKKLPPPVPSITIEIDNSREIYDGPIDFDVAGDDKTPT
                     DWYPELDPEPQIEDDLPTYFPAEKPSFPGGYKAMMSFLKKNIVYPKLANKINITGKVY
                     IEFTVEKDGSVSDLIVLRGIGGGCEEEALRVVNMMPKWNCGKQNGIPVRVRLTLPIKF
                     SLF"
     gene            3608..4120
                     /locus_tag="QF480_07900"
     CDS             3608..4120
                     /locus_tag="QF480_07900"
                     /inference="COORDINATES: protein motif:HMM:NF025946.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HJN06523.1"
                     /translation="MMRIKILILAFIVFGGLQARAQMNSTVVDPKTKTKMLLGYCDKK
                     GLQKGIYGTYFKSQYDLYNPADMYINKLENKIDDVEITIVLATWCSDSQREVPRFYKV
                     INEAGYNDKRVQVIAVDKNMEAIVVDIKDMDIKRVPTFIIYKDEKEIGRIVETPKKSL
                     ERDLWNIVKK"
BASE COUNT         1523 a          688 c          668 g         1264 t
ORIGIN      
        1 atcaaaaaat gatctgcaac actatatcta tcagcaaaaa aagctatcag cataaaatta
       61 acaacccagt acctacctgt ccaagccaaa atagttgctg taaaactttt aatccaatac
      121 aatgcgggtt tatttttaat cgaccttgat gtttgaatta actgattagc cgatttacgt
      181 gctcttaacc tccagcgtgt caaaatagga aaaagaaaca cccatgatat taacgattta
      241 aacaaatgag ggttaatgaa caatgcataa gttaaaaaca aggtgtaaac aaaaattaca
      301 atgtagcccc cataaaaggc ataaataatt ttatctatcg aaacagattc cggaggaaat
      361 atatttgtgc caaaaatgaa gtaaacaatg ggaacagtaa taatgaaaaa tatttcatcc
      421 aaaaaaatgg ccgtgagaac aactgctgta ctttttccgg cacttaatcc ttccttgtaa
      481 aggaaaaaaa tagcgggtcc tgttcctcca acaactgagg gagaaatcgc tgaactaaat
      541 tcccataaca ttataacatt aaatgcctgc ctccatccaa tatctgaatc agttaataca
      601 atcaatctat agatgtaggc aagatcccga attgccatca ttaccaatgc aattagaata
      661 taaaaaacag tatgccaagt aaaggttaaa aaagaaaatg tatcactgct aaaactccga
      721 tacatcaaaa aggcgctcac tcctaaccct attaaaatag gccagattat tcgagatggt
      781 ctaagagtgt taactatttt gtccaaaact ataggattgt attgcaaaga taagcgtaat
      841 ccattgaaaa aagttataac ttatattaca tatttatact taactgtgtc attatgacag
      901 ttttactaca ataatcatgt cattatgact tgtatatctc gcattaatta agattctttg
      961 caatggaaca gtaattgaca attcgctatt gaaatcgaaa taataaacaa taataaaata
     1021 ggaggaaata aaatgaattt agtaagattt aatcatcccg gattttcaca tttttttgaa
     1081 aactttgaaa aaacacataa tggtgtttgt aacgaaacaa aaggtaatat gccttcagtt
     1141 aacacaatag aaaatgataa ggactttatt ctcgagattg cagcacctgg acttaaaaaa
     1201 gatgagttca aaattaatct tgaaaaccaa acccttacag tttcgaggga agtgaaagaa
     1261 gagaaaaaag aaaaaaagga aaactatacc cgcagagaat ttgtttatgg aaattttagc
     1321 cgttcattca cattgcctaa aagcattatg ttcgataaaa ttgccgctga ttacaatgac
     1381 ggtatactca aacttacctt accaaaaaaa gagaaagaag ctaaattgag tcgtgaaatc
     1441 aatatctcat aactactagt gtaattatca acattaattt ttgaaccctg cattctgtgc
     1501 agggtttttt tatttaagca aacatcaata ggctaattgc cataacgccc attccaacaa
     1561 ttaatccata aattgaaaga tggtgttctc catatttttc agctgcgggt agcaattcat
     1621 ctaatgatat aaataccata ataccggcaa cacttgcaaa taaaactcca aaaagtgtgg
     1681 gtgataaaaa tggcataagt attaaaaacc caattattgc acctacaggt tcagctagtc
     1741 cggaacttaa tgaaagccaa aatgcttttt tccgactacc agtagcataa aaaatcggta
     1801 tggaaacagc aatgccctca ggaatattat gaatcgcaat agcaactgca atagctatac
     1861 ctaagtgcgg atcggttaat gcagccgtga atgttgctag gccttcagga aaattatgaa
     1921 tagcaattgc caatgctgtg aaaagtccca tgcgcattaa cttcgcagaa tctttaggct
     1981 tatctattgc catttcctca accttatgca tctcatgtgg gttttctaca gaaggaatca
     2041 atttatcaat aattgcgata aataatattc caccaaaaaa tgcagctgtc gtaacccagt
     2101 aaccttgtgt acttcctaat tccgaagtaa gttcaatcct ggctttgaca aatatttcaa
     2161 caaacgaaac gtagatcatt acaccagctg aaaaacccaa tgcaagtgat aaaaaaccag
     2221 tatctgtttt ttttgcaaaa aaagctatcg cactaccaac tcctgttgat agccctgcaa
     2281 aaagtgttaa tccgaatgca aatgcaattg tgttccaatc catatctgat taaatgttac
     2341 tattttcgat tgctcaatat ttagatttat tattcaatcg attcacggtt tttcatatct
     2401 ttattttctt tgtacactct tctcgttttt actttgtgca tctctctgtc gataaccaaa
     2461 tgagtaattt tccatgcttg agtgtcaata tcagataact gtaaagcaat attaaatttc
     2521 gtttccgaaa catcatgccg atatataaga ttacatagtt tttcaaaatc atttataagt
     2581 aaatttgaaa taaaggcatg ccgtctgatt tccagttcat ttctacttaa tgactcgtaa
     2641 tcgcttttta ggggttcatt gtatttaaaa acttcttttt tcaaattaac tgactttaac
     2701 aatcaaaaat acagaaatta aaataaggta taatattcgt ggcatagttg ttggtttttt
     2761 ggagatgaac caacacatat tgacatgaga aaaagaaaaa acaaaaagtc ggaactcgaa
     2821 agtaaaaaat taattttctt ccaagtagga ttagtcatcg cattactttc ggtactatat
     2881 gcctttgaat acaagtctta tgaaaagtat gagatacctg agtttagcaa tagagacatg
     2941 gaagttgatt gggaaataat tatcccaact aaacataaaa agaaacttcc tcctcctgtc
     3001 ccatcaataa caattgagat tgataattcc agagaaattt atgatggccc aattgatttt
     3061 gacgttgctg gtgatgataa aacacctact gactggtatc ctgagcttga tcctgaacca
     3121 caaattgagg atgatctacc aacttatttt ccggcggaaa aaccttcctt tcctggagga
     3181 tacaaagcaa tgatgagttt tctaaaaaag aatattgttt acccaaagtt agctaataaa
     3241 ataaatataa caggcaaagt atatatagag tttaccgtgg aaaaagacgg atcagtttct
     3301 gaccttattg tacttagagg aataggaggc ggttgtgagg aagaagctct tcgcgtagtt
     3361 aatatgatgc caaaatggaa ctgtggcaaa caaaatggca ttccggtcag agtaagacta
     3421 acattaccta taaaattttc tcttttttaa aagattaagt tctttttaat atccctattt
     3481 taaagatttc ctgcgcttct ttaaattgaa ttataataat cttactaaat taatgttttc
     3541 attttattag tttgatagaa atcatcttat taaacttttt ggtctaattt tgcaatctaa
     3601 aatttaaatg atgcgtatca agatattaat acttgcattt atagtatttg gtggtttaca
     3661 agctagagct caaatgaata gcacagtagt tgatccgaaa acaaagacca aaatgttact
     3721 tggctattgt gataaaaaag gccttcagaa ggggatttat ggcacttatt ttaaaagtca
     3781 atatgattta tataatccgg ccgatatgta cataaataag ctggaaaata aaatagatga
     3841 tgtggaaatt acaatagtat tggccacctg gtgttctgat agccagagag aagttcctcg
     3901 tttttataaa gtaataaatg aagcaggata taatgacaaa cgcgttcaag taattgctgt
     3961 tgataaaaat atggaagcaa ttgttgttga tattaaggat atggatatca aacgggttcc
     4021 tacttttata atttataaag acgaaaaaga aattggacgt atcgttgaga caccaaaaaa
     4081 gtcgcttgag agagaccttt ggaatattgt taaaaagtaa cggataaatt tcattaattg
     4141 ctt
//
LOCUS       DASCQP010000460         1509 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001683511, whole genome shotgun sequence.
ACCESSION   DASCQP010000460 DASCQP010000000
VERSION     DASCQP010000460.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1509)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1509)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1509
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001683511"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..227
                     /locus_tag="QF480_07905"
     CDS             <1..227
                     /locus_tag="QF480_07905"
                     /inference="COORDINATES: protein motif:HMM:NF019284.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06524.1"
                     /translation="NYNGRWLYYNLVGDIIGTGNYVKGTGIQKAWYPNGNIMREINYV
                     NNLKHGTEKLFNIDGKLEETLYYKEGKLID"
     gene            303..>1509
                     /locus_tag="QF480_07910"
     CDS             303..>1509
                     /locus_tag="QF480_07910"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HJN06525.1"
                     /translation="MSKLRFLFLEDNSIDAQLIIDELRDFGFQFEQLLVNNKQEFLVG
                     LNNFNPHIVFSDFLIPDFNGIEVIKEIINKHQGIPIIIVSASINEVTAVECMKLGASD
                     YILKNNLTRLGIATKSALEIAKLKEENLKVQNEIKAREASLSAIFKAADNVSFILSTV
                     VGEDSIILEFSHGAENIFGYKKNEIIGKPVKILHTVETIENFSNYLNKMKKGEEGFKG
                     QTVMIRKSGEKFPALHTAYPVFDKDGNLVHALGVTIDISKVIEIENALKEREAQLLHS
                     QKMEAIGLMASGIAHNFNNILQVVVGYIDFAKEGLKETEQRYKDIEQINQHIIRATKL
                     TKSLLAVGKEQFMTKNDIDINDIMKPIVDITNRTTNNNIEVKFTPQENLPTIVADGGQ
                     IDQVIMNIFL"
BASE COUNT          578 a          217 c          267 g          447 t
ORIGIN      
        1 gtaattataa tggtcgctgg ctttattaca acctagttgg tgatataatt ggcactggca
       61 actatgttaa gggcacagga attcaaaaag catggtatcc aaatgggaat ataatgcggg
      121 aaatcaatta tgtcaataat ctaaaacatg gcaccgaaaa attgtttaac attgatggaa
      181 aacttgaaga aactctatat tataaagaag gcaaattaat agattaaacg ttgtgtgaaa
      241 atattaatct ccaaatttaa ttttactttt attaattagt aatatccaaa accaagtaaa
      301 ttatgtcgaa attacgattc cttttcctgg aagacaattc aatcgatgca caattaataa
      361 ttgatgagtt acgtgatttc ggttttcagt ttgaacaact acttgttaac aataaacaag
      421 aatttttagt tggtctaaac aacttcaatc cacacattgt tttctccgac tttttgattc
      481 ctgatttcaa tggcattgaa gttattaaag aaataattaa taagcaccaa ggtataccaa
      541 ttattatcgt ttcagcatca ataaatgagg taacagctgt tgaatgtatg aaattgggag
      601 catctgatta tattcttaaa aacaacctca ctcggctagg tattgcgaca aaatcagcgt
      661 tagagattgc aaagctaaaa gaagaaaacc taaaggtgca aaatgaaatt aaagcaagag
      721 aagccagttt aagtgcaatt ttcaaagctg ccgataatgt ctcgtttatt ttaagtaccg
      781 ttgttggtga agattctatt atcttggaat ttagtcatgg tgctgaaaac atttttggat
      841 ataagaaaaa tgaaattatt ggcaaaccag taaaaatatt acatactgtt gagactattg
      901 aaaacttttc aaattatctt aataagatga aaaagggtga agaagggttc aaaggacaaa
      961 ctgtaatgat aagaaaatct ggggaaaaat tccctgcact tcatactgcc tatccggtgt
     1021 ttgataaaga tgggaatctt gtgcatgctt taggtgttac aattgacata agtaaagtaa
     1081 ttgaaattga gaatgctctg aaagaacggg aagcacaatt acttcattcc caaaaaatgg
     1141 aagcaattgg acttatggca agtggaattg cacacaactt taataacata ttacaggtag
     1201 ttgttggtta catcgacttt gcaaaagaag gactaaagga aaccgaacaa aggtataaag
     1261 atattgaaca aataaaccag catattatac gggcaacaaa actgacaaag agccttctag
     1321 ctgttggtaa agaacaattt atgacaaaaa atgatattga tataaacgat atcatgaaac
     1381 ctattgttga tattacaaat cgcacaacta ataacaatat agaagtcaaa tttacgccac
     1441 aggaaaacct accaaccatt gttgctgatg gaggccaaat agatcaggta attatgaata
     1501 tctttttaa
//
LOCUS       DASCQP010000461         3664 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001686214, whole genome shotgun sequence.
ACCESSION   DASCQP010000461 DASCQP010000000
VERSION     DASCQP010000461.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3664)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3664)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3664
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001686214"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..709
                     /locus_tag="QF480_07915"
     CDS             <1..709
                     /locus_tag="QF480_07915"
                     /inference="COORDINATES: protein motif:HMM:NF015013.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="polysaccharide biosynthesis C-terminal
                     domain-containing protein"
                     /protein_id="HJN06526.1"
                     /translation="IPQIVKKLLSLGIMYAFTFFVVQLNYRLDILLLEKLSTIQQVGI
                     YSLGVHIVEQLWTIPFAISVVLFSRTANSKDQNIMTQSTISLARLSFIIIFLLSVVVI
                     FVAPYIIPAVFGSEFNPSIEIINLMLPGVIILVIFRVLSGQLAGMGKPYLAIYVFLPA
                     LIINILLNFLWIPEYGGKGAAWASDISYAVGTFGYWLIYSREVKVGFFEILRFKKDDI
                     SIFIESKNKLKVNGKLK"
     gene            693..1775
                     /locus_tag="QF480_07920"
     CDS             693..1775
                     /locus_tag="QF480_07920"
                     /EC_number="2.8.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF012888.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA];
                     GO_function: GO:0050656 - 3'-phosphoadenosine
                     5'-phosphosulfate binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HJN06527.1"
                     /translation="MENLSNIPIFFIVGRPRSGTTLLRTLFDAHPNVNFPPECQFIVN
                     LYPKYGKKTNWTEKDILSFYNDLINQWLFDTWTIDPDKLKKTLLSYKGHNTYGTICKV
                     VYMQYISLFEKEKLLTIGDKNPGYAIYTKLLLKIFPEAKFIHIIRDYRDNFVSIKNVD
                     FELPIPSLVVQKWKYFFKKFNKDGAERPDTYYVIKYEDLVKDPEIQLEKLCKFIGAEY
                     KASVFNFHNKKDEILKTYPPGYIQNYHSSLMKKINTSKIGVWKKQLSPWKIKLMDATA
                     GKVAVQAGYERVYKKFNLLIYLYVLPGRLYAGLLYLATLIVEKFPYKLRMIILIKGPL
                     FLAKIYLSIFKPKKMSEMQDIITKRK"
     gene            1908..2462
                     /gene="cysC"
                     /locus_tag="QF480_07925"
     CDS             1908..2462
                     /gene="cysC"
                     /locus_tag="QF480_07925"
                     /EC_number="2.7.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005836053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004020 - adenylylsulfate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyl-sulfate kinase"
                     /protein_id="HJN06528.1"
                     /translation="MSIKQSSNSRVAKDKIGTTIWFTGLSGSGKTTMANHLQKALLNK
                     GISSVILDGDEVRKTINNDLGFSISDREENNRRIAEIAKIINKSGGITICAFITPTNK
                     IRENIKHIIGDSNFILVFVDTPLETCEKRDKKSLYKKAKEGKVKNFSGITSIFEEPTN
                     PDIILDGLKSVDENIEKLLIELKH"
     gene            complement(2469..>3664)
                     /locus_tag="QF480_07930"
     CDS             complement(2469..>3664)
                     /locus_tag="QF480_07930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06529.1"
                     /translation="ISTNNRRNQVGPVNGVGVRYNGQNLDLNRDAMKLETPEITGVVE
                     NILNYWDPAVTVDCHTTNGSFHEEPITFTWMQNPNGDRNLINFMRDDMMPAVQRTLRD
                     DYDVENIFYGVFIDRMNYDKGWVSYASEPRYFVNYIGLRNRLAILNENYVYADFKTRV
                     NGCYYFLKSVLEYSLEHKNAIKELLASADKITISRGASPSITDSFAIEYKGKPTPELI
                     TIKSFETDTIPGVKGYWRYKASDRKRTVTVPYIADYYPTKSIKFPYAYILSVSDPEII
                     SVLNSHGIKIHQLGKNYKLIVERFEIDELKGSSRLNQGHYTDKIKGKFIQEEKEFSKG
                     TNVILTNQKLGSLCAALLEPQAVDGLLYWNFFDRYLTPQWGSGYYPYPVYRILDNMEL
                     NVMKK"
BASE COUNT         1254 a          593 c          593 g         1224 t
ORIGIN      
        1 aatcccgcag atagttaaaa aattattgag tttagggatt atgtatgcat ttacattttt
       61 cgttgttcag ttgaattatc ggcttgacat attattgctt gaaaagttat ctacaattca
      121 gcaagtaggt atttactcac tcggagttca tattgtcgag caattatgga caataccatt
      181 tgctataagt gttgtattat ttagcaggac cgcaaattcg aaagatcaaa atattatgac
      241 tcaatccaca atttcgctcg caagattgtc atttataata atttttcttc tttctgtagt
      301 tgttattttt gtagcaccat atattatacc tgccgtattt ggcagtgagt ttaatcccag
      361 tatagagata attaacttaa tgttgcctgg agttatcatt ctggttattt tcagggtatt
      421 gagtggacaa ttagcaggaa tgggtaaacc ttatcttgca atttatgtat ttctacctgc
      481 tctgatcatt aatatcttac ttaactttct atggattcct gaatatggtg gaaaaggagc
      541 tgcctgggct tcagacatta gttatgctgt tggaacattt ggatactggc ttatttattc
      601 aagggaagta aaagttggat tttttgaaat tcttagattt aaaaaagatg atataagtat
      661 ctttatcgaa tcaaaaaaca agttaaaagt aaatggaaaa cttaagtaat attccgattt
      721 tctttattgt tggacgacct agatcgggca caacgttact gagaactctt tttgacgcac
      781 atcctaatgt aaatttccct cccgaatgtc agtttatcgt taatctttat cctaagtatg
      841 gcaaaaaaac taactggact gagaaagata tactttcatt ttacaatgat ctgatcaatc
      901 aatggttatt tgatacatgg acaattgatc ctgataaact gaagaaaact ctgttatcat
      961 ataaaggtca taatacgtac ggtacaattt gcaaagtagt atacatgcaa tatatttcat
     1021 tgtttgagaa ggaaaagcta ttaactattg gagataaaaa tcctggatat gctatttaca
     1081 caaaattgtt attaaaaata tttccagaag caaaattcat tcatataata cgagactaca
     1141 gggataactt tgtatcaata aaaaatgttg actttgagtt accaataccc tcacttgttg
     1201 ttcagaaatg gaaatatttt ttcaagaaat tcaataagga cggcgctgaa agacctgata
     1261 cttattatgt tatcaaatat gaagatctcg ttaaagatcc tgaaatccag ttagaaaaac
     1321 tttgtaaatt cattggtgct gaatataagg ccagtgtctt taattttcat aataagaaag
     1381 atgaaatact caaaacctat cctcccggat atattcaaaa ttatcactcc agtttaatga
     1441 aaaaaataaa cactagtaaa attggagttt ggaaaaagca attatcacct tggaagataa
     1501 aacttatgga tgcaacagct ggaaaggttg ctgtacaagc aggatatgaa agagtgtata
     1561 aaaagtttaa tctattgatt tatttgtatg tgttacctgg ccgcctatat gcaggattgc
     1621 tttatttggc aacgctaatt gttgaaaaat ttccatataa gttaagaatg ataatactta
     1681 tcaagggtcc tcttttcctg gcaaaaatat acctctccat cttcaagcct aagaaaatga
     1741 gtgaaatgca agatataatt acaaagcgca aatagccttt gtctgaagaa tacttcaaag
     1801 aataatcaca tactttaatt cagaagcaga tgtggatttg atagtaaaca gctagtcaaa
     1861 gttattgtat ttttgaagaa cttattttaa aacaattaga gactttaatg tcaataaaac
     1921 aatcatcgaa ttcacgtgtg gcaaaagata agattggaac aaccatctgg tttacaggac
     1981 tatcgggtag tggaaaaacc acgatggcca atcatcttca aaaagcattg ttaaataaag
     2041 gtatttcgtc agttattttg gatggcgatg aagtaagaaa aaccattaat aacgacctcg
     2101 gtttttcaat ctctgatcgt gaagaaaaca atagaagaat agctgaaatt gctaaaatta
     2161 ttaataaatc tggagggata acaatttgtg cttttattac acctacaaac aagataagag
     2221 aaaacattaa acatatcata ggtgacagta atttcatttt agtctttgta gatacgcctt
     2281 tagagacttg tgaaaaacga gataaaaaat ctttatataa aaaagcgaaa gaaggaaagg
     2341 tcaagaattt ttctggtata acatcaattt tcgaagaacc tactaatccg gatattatac
     2401 tagatggctt aaaatcagtt gatgaaaata ttgagaaatt attgattgaa ctgaaacatt
     2461 aaaagaactt atttcttcat cacattcaat tccatattat ccagaatgcg ataaacagga
     2521 tatgggtaat acccggaacc ccattgagga gtcaaatatc tatcaaagaa attccaataa
     2581 agtaatccat caactgcttg tggttcaaga agtgcagcac ataatgatcc aagtttctga
     2641 ttcgttaaaa taacattggt tcccttgcta aattcctttt cttcttgaat aaattttcct
     2701 ttaatcttat ctgtataatg tccctggttt aaacgtgagg atccttttaa ttcatcaatt
     2761 tcaaacctct ctacaattaa tttgtaattt ttgcccaatt gatgaatttt aatcccatga
     2821 ctatttagca cagaaataat ctcaggatcc gatacagata atatgtatgc atatgggaac
     2881 tttatacttt ttgttggata ataatcggca atatatggaa cggtaaccgt tctcttccta
     2941 tcactcgctt tgtatctcca ataaccttta acacctggaa ttgtatccgt ttcaaatgat
     3001 ttaattgtta tcaattcagg tgttggttta cctttatatt caattgcaaa tgagtcggta
     3061 atacttggtg acgctccacg tgaaatcgta attttatcag cactggcaag caattcttta
     3121 attgcatttt tatgctcaag tgaatattca agaacagatt tcagaaagta ataacatccg
     3181 ttaacacgtg ttttaaaatc agcataaaca taattttcat tcagtattgc taaacgattc
     3241 cttaaaccta tataattaac aaagtatctg ggttcacttg cgtatgatac ccagcctttg
     3301 tcataattca tacggtcaat aaacacaccg taaaaaatat tttccacgtc gtaatcatcc
     3361 ctcaatgttc tttgaacggc aggcatcata tcatcgcgca taaaattaat caggtttcta
     3421 tcaccgtttg gattctgcat ccatgtgaag gtaatcggtt cttcatgaaa tgaaccattt
     3481 gttgtatggc agtcaactgt aactgcagga tcccaataat ttagaatatt ttcaaccaca
     3541 cctgtaattt caggggtttc gagtttcata gcatctctat tcaaatcaag attttgacca
     3601 ttgtacctca ctcctactcc attaacaggt ccaacctggt ttcttctgtt atttgtactt
     3661 atct
//
LOCUS       DASCQP010000462         5822 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001689211, whole genome shotgun sequence.
ACCESSION   DASCQP010000462 DASCQP010000000
VERSION     DASCQP010000462.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 5822)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5822)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5822
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001689211"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1127)
                     /locus_tag="QF480_07935"
     CDS             complement(<1..1127)
                     /locus_tag="QF480_07935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008664789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HJN06530.1"
                     /translation="MDKLQNRLAEFKKVFVGEIFTDKSTRLMYATDASAYREIPTAVA
                     YPKNKSDIINLIHFARKNNTSIIPRTAGTSLAGQVVGSGIVADVSKHMTQILEINKEE
                     KWVRIEPGVILDVLNLALKEHGLFFGPETSTSNRCMLGGMLGNNACGSHSLIYGSTRD
                     HTLEVEVILSDGCEAIFKPLSIEEFQDKITGETLENKIYKSAHEILSDNNNKSEINKE
                     FPDSNIRRRNTGYALDLLLKMKPFDSEGDQFNFSSLLAGSEGTLAFTTAIKLNLVPLP
                     PSNKALVCLHFNTIKEALKANILALKHKPVAIELMDSTILELTKKNLAQEKNRFFVEG
                     EPEAILIVEFAEEDPEIIISKIILMETEMKEAGYGYHFPVI"
     gene            complement(1208..2164)
                     /locus_tag="QF480_07940"
     CDS             complement(1208..2164)
                     /locus_tag="QF480_07940"
                     /inference="COORDINATES: protein motif:HMM:TIGR00545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoate--protein ligase"
                     /protein_id="HJN06531.1"
                     /translation="MILVLRNSDNPYFNIATEEHFLKNHSEDIIMVWKSSPSVVIGKH
                     QNTIAEININFLDIHKIPVIRRITGGGTVYHDEGNINYSIITSSENKEKLVDFRKFTE
                     PIIGFLHTLGLIAVFEGKNNLTINSKKFSGNSAHVFKNRVLHHGTILFNTDIDNLKAS
                     IREGDFNISDKSVKSIRANVANIADQLTTPLQIEEFIDKLTKYFIDYFKIESTIQLTD
                     RDITSINELVENKYKSWDWNYGYSPSYNYKHELNSIKLNMRINKGIIENIDIGGNISF
                     KEEICDSLLNVKYEKEAVEKVFTLYQISVDDLNLYMMLFGFY"
     gene            complement(2161..3024)
                     /gene="folP"
                     /locus_tag="QF480_07945"
     CDS             complement(2161..3024)
                     /gene="folP"
                     /locus_tag="QF480_07945"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007483652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004156 - dihydropteroate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HJN06532.1"
                     /translation="MNNKSTSFNEIRNIKVDNKLIDFSTPKIMGVLNLTPDSFYDGGK
                     YKDKDIWIKRTEGMLKNGTDIIDVGAVSTRPGAKEVSVDEELKRIVEPVNILTNLFPE
                     AVFSIDTYRARVAEETVNAGAHIINDISGGTMDTNMFATIAKLNVPYILMHIHGTPQN
                     MMSSPIEDNIVSIVKTFFQKAVDELSSLGVDDIILDPGFGFGKTLECNYKLIANLENT
                     RINKLPILVGISRKSMITKVLNTTPEDSLIGTTSLHTIALSSGANILRVHDVEEARQV
                     VKIVEFMENNK"
     gene            3082..3636
                     /locus_tag="QF480_07950"
     CDS             3082..3636
                     /locus_tag="QF480_07950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002562582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1599 domain-containing protein"
                     /protein_id="HJN06533.1"
                     /translation="MNKDTAAQFEEVIEYCRDIFENKQKDYGTAWRILRLESLTDQIY
                     IKANRIRTLQVKEVSLVNEGIIPEFVGIVNYSVMAIVQLELGVAESADMSAEKAIELY
                     IEKLNEASALMMNKNHDYDEAWRNMRVSSFTDIILMKLLRIKQIEDNKRQTIVSEGLD
                     ANYQDIINYSLFALIKLIIEKEDA"
     gene            3662..4759
                     /locus_tag="QF480_07955"
     CDS             3662..4759
                     /locus_tag="QF480_07955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06534.1"
                     /translation="MKIIRIVTGLVFIFSATVKGIDPLGTDYRVVDYLEAYSWYSFID
                     FSFALTILVISVEFFLGVALLFRLRLRLAALGVLMLMIFFTVVTFIDARYNLITDCGC
                     FGDAIKLTNWQTFYKNIVLLIFAISIFAWRSKIERQGGKGAQLIVLLLFIAGFGWFMS
                     YNYNHLPVVDFRDWEIGNDMKSTGRETIVSYLAYKNKNTGEIKEYISPDYPWNDSVWL
                     SEWEFVDQRIDDSQLVMKHGLIIEDENGNNLTEQIIENPGYQFVLASYDLDEAVGQGM
                     IDASGIFHKMIENNIDVALLTSSTEDVIEKYRKLYTIDYDVYFADDIELKAMIRSNPG
                     LVLLKDGVVISKWHYNDFPQISKVEELISHD"
     gene            4752..>5822
                     /locus_tag="QF480_07960"
     CDS             4752..>5822
                     /locus_tag="QF480_07960"
                     /inference="COORDINATES: protein motif:HMM:NF012738.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJN06535.1"
                     /translation="MIKFILRRLFYGFLVLWGVITVIFFLFNILPGDPARMLLGQRSD
                     VSSVEAITKDLGLDKPLTGQYFNFLNDLSPISYHNFNNPESYWYFNDSDYGGVVRVIP
                     ISKNWIVLKFPYLRRSYQSRRHVSAIIAEAFPKTLLLASSSILIAMILGILLGIPAAL
                     FKDSILDRSLLVFSSFGMSIPSFFAAIIMAWLFAFVLADYTGLQMFGSLYTVDSYTGE
                     KYIDLKNLILPAITLGIRPLAIVVSLTRSSLLDVLSQDYIRTARAKGLNGFSVVIFHG
                     LRNALNPVITAITGWFASLMAGAVFVEYVFDWKGIGVVIVDALEKYDLPVIMGSVLTI
                     SVVLVLVNILVDILYAALDPRIR"
BASE COUNT         1763 a          948 c         1067 g         2044 t
ORIGIN      
        1 tctatcacag ggaaatgata tccatatccg gcttccttca tttccgtttc cattaagatt
       61 attttgctta tgattatttc gggatcttct tctgcaaact caacaattaa tattgcttca
      121 ggttcgcctt caacaaaaaa tcgatttttt tcttgtgcta agttcttttt tgtgagctca
      181 agtatggtac tatccattaa ctcaatggca actggtttat gtttaagagc taaaatattt
      241 gcctttaaag cttcttttat agtattaaaa tgtaaacaaa caagtgcctt gttactagga
      301 gggaggggca ccaaatttag ttttattgca gttgtaaagg ctaaagtacc ttctgaacct
      361 gctaataaac ttgaaaagtt aaactgatca ccttcagaat caaaaggctt catcttcaat
      421 aacaaatcta aagcatatcc tgtgtttctt cgtcgtatgt tactgtcggg aaattcttta
      481 tttatttcag acttgttatt attatctgaa aggatttcgt gtgcactttt gtaaatctta
      541 ttctcaagtg tctcgcctgt tattttatcc tgaaattcct caattgaaag aggtttgaat
      601 attgcttcac atccatcact aagaattact tcaacttcta atgtatggtc tcttgtactt
      661 ccataaatta atgaatgcga gccacatgca ttattaccaa gcatgcctcc tagcatacat
      721 cggtttgatg ttgatgtttc ggggccgaaa aacaaaccat gctcttttaa agcaagattc
      781 agtacatcta atataactcc aggttcaatc cttacccatt tttcctcttt gttgatttca
      841 agtatctgtg tcatatgttt cgacacatct gctacgattc cactaccaac aacctgacct
      901 gcaagagatg taccggcagt tcgtggaata atagatgtat tgttttttct ggcaaaatgg
      961 atgaggttta taatgtctga cttgtttttt gggtaggcaa cagcagtagg aatctcgcga
     1021 taggcagacg catcggtagc atacatcaaa cgggttgact tatcggtgaa aatctcgcca
     1081 acaaaaactt ttttaaactc agctagtctg ttctgcagtt tatccattac ttcttttact
     1141 gaaaaggcaa atatagcagg tataagggaa atatgggtat atgtaaatag gattaacagt
     1201 caattaatta ataaaatcca aacagcatca tatatagatt taaatcatcc acactaattt
     1261 gatataacgt gaaaactttt tcaactgcct ctttctcata ttttacattt aataaactat
     1321 cacagatttc ttctttaaaa cttatattac cgccaatatc aatattttct attattccct
     1381 tattaattct catattaagt ttaatactat taagttcgtg tttataattg tacgaagggg
     1441 agtagccgta gttccagtcc caacttttat atttgttttc aaccagttcg ttgatggagg
     1501 ttatatctct gtcagttaat tgaatagtag attcaatttt gaagtaatca ataaagtatt
     1561 ttgtgagctt atctataaat tcctcaattt gtaagggtgt cgtcaactga tcggctatat
     1621 tagcaacatt agccctaatg gacttcactg atttatcaga aatgttaaaa tcgccttccc
     1681 gaatagaagc tttcagatta tcaatatcag tgttgaataa tatagtgcca tggtgcaaca
     1741 ccctgttctt aaaaacatga gccgaattac ctgagaattt tttgctgttt atagttaggt
     1801 tgttttttcc ttcaaaaacg gcaattaatc ccaatgtatg caagaatcca ataataggtt
     1861 cagtgaattt tcggaaatca acaagtttct ccttgttttc tgatgatgta attatactgt
     1921 agttaatatt tccctcatcg tggtaaacag tgccacctcc ggttattctt ctaataacag
     1981 gaattttatg tatgtccaag aaatttatat taatctctgc aattgtattt tggtgtttac
     2041 ctattactac cgaaggactg cttttccaaa ccataataat atcttctgag tgatttttca
     2101 aaaaatgttc ttcagtggca atattgaagt atggattatc gctatttcgt agaactaata
     2161 tcatttatta ttctccataa actcgacaat cttaaccacc tgtcttgctt cttcaacatc
     2221 atgtacgcgt agtatattgg caccagatga caatgcaata gtatgaagtg aggttgtccc
     2281 aataagtgaa tcttcgggtg tagtgtttaa taccttggta atcatcgatt tccttgatat
     2341 tccaacaaga attggcagtt tgttaattct tgtgttttca agatttgcaa taagcttata
     2401 attgcattca agtgttttcc caaaaccaaa tccaggatca aggattatat catctactcc
     2461 taagcttgat aattcgtcta cggctttttg aaaaaaggtt ttcactattg aaactatgtt
     2521 gtcttcaatt ggtgaactca tcatattttg tggtgtgcca tgaatatgca taagtatata
     2581 ggggacattt aactttgcta ttgttgcaaa catattggta tccattgttc cacctgatat
     2641 gtcattaata atatgggcac ctgcgttaac tgtttcttct gctactctag ctcgatatgt
     2701 gtcaatagaa aaaacagctt ccggaaataa attggttaat atattaactg gttccacgat
     2761 tcttttgagc tcttcatcaa cagatacctc ttttgctcca ggtcgggtag aaactgcacc
     2821 aacatcgata atgtcggttc cgttctttaa cattccttct gttctcttaa tccaaatatc
     2881 tttatccttg tatttgcccc catcataaaa tgaatcaggc gttagattca agacacccat
     2941 tatttttggt gttgaaaaat cgattagttt attatcgacc ttaatatttc tgatttcatt
     3001 aaaagatgta cttttattgt tcatttaaac acaaactttg taaacttata gcaaaggtaa
     3061 aattaaactc attaacgggg aatgaataaa gatacagcag ctcaatttga agaggtaatt
     3121 gaatattgca gggatatatt tgaaaataag caaaaagatt acggaacggc gtggcgcatt
     3181 cttcggttgg aaagtttaac agatcagatc tacatcaaag ctaacagaat cagaacccta
     3241 caagttaagg aagtaagttt ggtaaatgaa ggcataattc ctgaatttgt tgggattgta
     3301 aattattctg taatggctat tgtacagctt gaattaggtg ttgctgagtc ggctgatatg
     3361 agtgctgaaa aggcaattga gctatatatt gaaaagctta atgaagccag tgcactaatg
     3421 atgaacaaaa atcatgatta cgatgaagcc tggcgcaata tgcgcgtgtc gtcatttact
     3481 gatattatat taatgaaatt attacgcatt aaacaaattg aagacaacaa aagacaaaca
     3541 attgtgtcgg agggtcttga tgctaattac caggatatca taaactattc actatttgcg
     3601 ttaataaaat tgataatcga gaaagaagat gcctaaggaa aaaaatattg aaccgttgct
     3661 agtgaagatt attcggatag ttacaggtct ggtttttata ttctcagcca cagtaaaagg
     3721 aattgatcca ttgggtactg attacagagt ggttgactac ctcgaagcct acagttggta
     3781 ttcttttatt gatttttcgt ttgcattaac aatattggtt atcagtgttg aatttttcct
     3841 gggagttgca ttacttttta gattacgcct tcgtcttgca gccttaggag tattgatgtt
     3901 aatgatcttt tttacagtcg taacttttat tgatgcaagg tacaatctga ttactgattg
     3961 tggttgcttt ggagatgcta ttaaattaac aaactggcaa acattttata aaaatattgt
     4021 actgctgata ttcgcaatat caatatttgc ttggagaagt aaaattgaac gacagggtgg
     4081 taaaggcgct caactcatag ttcttctgtt atttatagct ggattcggat ggtttatgtc
     4141 gtacaattat aatcatttgc cagtagtcga tttcagagac tgggaaattg ggaacgatat
     4201 gaaaagtacc ggacgcgaga caatagtttc gtatcttgct tacaagaaca aaaataccgg
     4261 tgaaataaaa gaatatattt cgccagatta cccgtggaat gattcagttt ggttatcgga
     4321 atgggagttt gttgatcaac gaattgatga ttctcagctg gttatgaagc atggattgat
     4381 aatcgaagat gaaaatggga ataatctcac agaacagata attgaaaatc ccggttatca
     4441 gtttgtattg gcgtcttatg atttagatga ggcagttgga caggggatga ttgatgcttc
     4501 tggtattttc cacaaaatga ttgaaaataa tattgatgtg gcactgctta caagttctac
     4561 agaagatgtt attgaaaaat atagaaagtt gtatacaatt gattatgatg tttattttgc
     4621 tgatgatatt gaactaaagg caatgattcg ttcaaatcca ggactggtat tactaaaaga
     4681 tggagttgtt atttcaaaat ggcattacaa cgattttcca caaattagca aagtggaaga
     4741 actaatatct catgattaag tttattctta gacgcttatt ttatggtttc ctggtactat
     4801 ggggagttat tacggtaatt ttctttctat tcaatatact gcctggcgat ccggctcgta
     4861 tgttattggg tcaacgatct gacgtttctt cagtagaagc aattacaaag gaccttggtt
     4921 tggataaacc actaactggt caatatttta acttccttaa tgatttatca cctatttctt
     4981 atcataattt caataatcct gaaagctatt ggtattttaa tgattcagat tatggtggag
     5041 ttgttagagt aataccaata tcaaagaatt ggatagtatt gaaatttcct tacttaagga
     5101 gatcgtacca aagccgtcgt catgttagcg caataatagc ggaagcattt cctaaaacat
     5161 tgcttctagc ctcatcatcg attttgatcg ctatgatact tggaatatta ttaggtatac
     5221 ctgcagcatt atttaaggat agtattctcg atcgatcgtt acttgtattt tcttcttttg
     5281 gaatgtccat accctcgttc tttgctgcaa taataatggc ttggctgttt gcgttcgtac
     5341 tggccgatta tactggtttg caaatgtttg gaagcttata tacagttgat agttatactg
     5401 gtgagaaata tatagacctg aaaaatttga tattgccggc tataacactg gggataagac
     5461 cccttgccat tgtggttagt ttaacgcgta gttcgttgct ggatgtgctg tcgcaggatt
     5521 atatccgaac tgcgagagca aagggattaa atggatttag tgttgtaatt tttcatggat
     5581 taagaaatgc attaaatcct gtaattacag ctataacagg ttggtttgca tctttaatgg
     5641 ctggtgccgt ttttgttgaa tacgtatttg attggaaagg tattggtgtt gtaattgttg
     5701 atgcccttga aaaatacgat ttgccggtta taatgggatc ggtattaacg atctcagttg
     5761 ttcttgtact tgtaaatatc ttagtagata tactttatgc cgctcttgat ccgaggatta
     5821 gg
//
LOCUS       DASCQP010000463         2327 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001693424, whole genome shotgun sequence.
ACCESSION   DASCQP010000463 DASCQP010000000
VERSION     DASCQP010000463.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2327)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2327)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2327
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001693424"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..633
                     /gene="rhaD"
                     /locus_tag="QF480_07965"
     CDS             <1..633
                     /gene="rhaD"
                     /locus_tag="QF480_07965"
                     /EC_number="4.1.2.19"
                     /inference="COORDINATES: protein motif:HMM:NF002963.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhamnulose-1-phosphate aldolase"
                     /protein_id="HJN06536.1"
                     /translation="LKEYPLKASYPNLANKVFVVTGKGKRMRDIAKLPIENTIVLKIN
                     SDGASYVTSDNNHLMPTSELPSHLAIHDMISQRGSSEKAVIHTHVTELIALTHISEYC
                     NQESLNDLIWRMHPETIMFLPNGVGFVPFELPGSAKIATDTVETLKSHQIALWEKHGV
                     FSIGTNLNDCYDLIDIVAKSVKIYFLCATTGNSPQGISNERLDELKNIVF"
     gene            630..1115
                     /locus_tag="QF480_07970"
     CDS             630..1115
                     /locus_tag="QF480_07970"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008666653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016790 - thiolester hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HJN06537.1"
                     /translation="MTDKFKNSKFHTFASYPEKMSKVLKDTTEIKVRFGEVDSMGIVW
                     HGNYVKYIEEGRESFGKKYGISYLDIYAHDVMAPVVNLNIDFKKQVQYGDVLIIETVF
                     VDSEAAKIIFKFNIIRKLDGELVATAESTQVFIDLNREMLLYPPQFVLDWKKKVGITD
                     K"
     gene            1119..2273
                     /locus_tag="QF480_07975"
     CDS             1119..2273
                     /locus_tag="QF480_07975"
                     /inference="COORDINATES: protein motif:HMM:NF012337.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase N-terminal-like
                     domain-containing protein"
                     /protein_id="HJN06538.1"
                     /translation="MVYFRSDNIISSLGNTTKENFDSMASDRIGIRAIDDHKIYPHIF
                     PASIIDEVRLEKEFDNIAEIYSKFNSYTKLEKMLITSIHDALRKADIDIASPRTGIIL
                     STTKGNIDLLSNNSKTSIDPERVMLWKLGDEIQSFFNNPNKVVVISNACISGVLAINT
                     AATYINAGMFDNVVVTGGDLVTRFVISGFMSFLALSPTACKPFDANRDGLSLGEAAGT
                     IILSKDRDSKQNSLIFKGGASANDANHISGPSRDGDGSFIAIKKAMIQADIKSEQIDH
                     ISAHGTATPYNDEMESISIDRHNLINAPVNSIKSYLGHTLGAAGIVETVILLEEMRQN
                     TLLKSAGFEELGVSRPINVINQIINKEVRNSLKLASGFGGCNAAVIISKA"
BASE COUNT          786 a          360 c          471 g          710 t
ORIGIN      
        1 ttaaaagaat acccacttaa agcatcttat ccaaatctgg caaacaaagt ttttgttgtt
       61 accggtaagg gtaaacgaat gagggatatt gctaagttac ccattgaaaa tacgatagtt
      121 ctcaaaatta attcggatgg agcttcttat gtaacctctg ataataatca cctcatgcct
      181 acatctgaat tgccatctca cctagcaatt catgatatga tatcacagag gggtagtagt
      241 gaaaaggctg taattcatac acatgtaaca gagctgatag cgctgacaca tataagtgaa
      301 tattgcaatc aagagagtct aaatgatctg atttggagga tgcatccgga aacaattatg
      361 tttttaccaa acggcgttgg ttttgttcct tttgaattac ccggttcggc taaaatagct
      421 acagatacag ttgaaacctt aaaaagtcat caaattgcgt tatgggaaaa acatggggtt
      481 tttagcattg gtaccaacct taacgattgc tacgatttga ttgatattgt tgcaaaatcg
      541 gtaaaaattt attttttatg tgcaactaca ggcaattcac ctcaaggtat tagtaatgaa
      601 cggttagatg agttgaagaa tattgtgttt tgacagataa atttaaaaac tctaaattcc
      661 atacttttgc aagttatcca gaaaaaatga gcaaggtttt aaaggacaca acagaaataa
      721 aggtgcgttt tggcgaggtc gattcgatgg gaattgtatg gcacggtaat tatgtaaaat
      781 acattgaaga aggtcgtgaa tcttttggaa aaaagtatgg catttcatac ttagatattt
      841 acgcacatga tgtcatggct ccggttgtta atctgaatat agattttaag aaacaagttc
      901 agtatggcga tgtgcttatt attgaaacag tatttgttga tagtgaggcg gcgaagatca
      961 tcttcaagtt caacataatc agaaagttgg atggcgaatt agttgcaact gcagaaagca
     1021 ctcaggtatt tattgatctg aatagagaaa tgctacttta tccacctcag tttgtattag
     1081 attggaaaaa gaaagttgga attactgata agtaactgat ggtttatttt agatccgata
     1141 atattatatc ctctcttgga aatacaacca aagaaaattt cgattcaatg gctagtgaca
     1201 gaattggtat aagagctatt gatgatcata aaatttatcc ccatatattt ccagcatcaa
     1261 ttattgatga ggttagactt gaaaaggaat ttgataacat agctgagata tattctaagt
     1321 ttaatagtta tactaagctt gagaagatgc ttatcacgtc gattcatgat gctttacgaa
     1381 aagcagatat tgatattgcc tctcctagaa caggaataat tttgtcaaca actaaaggta
     1441 acatcgattt gctatccaac aacagtaaaa cttctatcga cccagaacgg gttatgctat
     1501 ggaagctagg tgatgaaatt caaagttttt ttaataatcc aaacaaggtc gttgtaattt
     1561 caaatgcgtg tatttctggt gtactggcaa ttaatacagc tgcaacgtac attaatgctg
     1621 gtatgtttga caatgtagtg gttacaggcg gcgatctcgt aaccaggttt gtcataagtg
     1681 gttttatgtc ttttttggca ttaagcccaa ctgcttgcaa accttttgac gctaatcgtg
     1741 atggtttgtc attaggagag gctgctggca ccattatact tagcaaggat agggatagca
     1801 aacaaaacag tctaatattc aaagggggtg catctgcaaa tgatgcaaac catatctctg
     1861 gcccatctcg agacggcgat ggttcattta tagcgataaa aaaagcgatg atccaggctg
     1921 atataaaatc agagcagatc gaccacattt cagctcatgg aaccgccaca ccttacaacg
     1981 atgaaatgga aagcatttca atcgacaggc acaatcttat taatgctccg gtaaatagca
     2041 taaaaagtta tttaggtcat acgcttggtg cagcaggtat tgttgaaact gtaattttat
     2101 tagaggaaat gaggcaaaat acacttctta aatctgcggg atttgaagaa cttggtgtaa
     2161 gtcgcccaat aaacgtgatc aaccaaataa ttaataaaga agtcagaaac agtttaaaat
     2221 tggcttcggg atttggtggg tgtaatgcag ctgtaataat ctcaaaagct tgattataag
     2281 tcatgaagga attgtttatt aatagttatt gtcatattaa aaagaaa
//
LOCUS       DASCQP010000464         1655 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001698985, whole genome shotgun sequence.
ACCESSION   DASCQP010000464 DASCQP010000000
VERSION     DASCQP010000464.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1655)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1655)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1655
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001698985"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..883
                     /gene="mraY"
                     /locus_tag="QF480_07980"
     CDS             <1..883
                     /gene="mraY"
                     /locus_tag="QF480_07980"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005861367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008963 -
                     phospho-N-acetylmuramoyl-pentapeptide-transferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HJN06539.1"
                     /translation="IKVFKKKKEGLPGKYKIAGQIILGLIVGLVMYFNSDIVVREKIK
                     PDTEVYTTIDQSESSSKFVYQQTRSTKTSIPFVKNNEFDYASLLKWIGKGYESWAYLI
                     FIPIVIFIIVAVSNGANLTDGMDGLATGTSAIIGLTLGILAWVSGNIIFANYLNIMYL
                     PNAGELTIFISAFVGATVGFLWYNTYPAQVFMGDTGSLALGGIIAVFAIIIRKELLIP
                     ILCGIFLAESLSVIIQVSYFKHTRKKYGKGVRIFKMSPIHHHFQKLGYPEPKIVQRFL
                     IVGIFLAVLTIITLKLR"
     gene            896..>1655
                     /locus_tag="QF480_07985"
     CDS             896..>1655
                     /locus_tag="QF480_07985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008863192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mur ligase family protein"
                     /protein_id="HJN06540.1"
                     /translation="MITHYQIVILGGGESGVGAALLAKKKGISVFISDNNKLKQKYIN
                     VLKHSEIDFEEGGHTENLILSADEIVKSPGIPETVAIIESIRAKKIPIISEIEFAARY
                     TSAKLICITGSNGKTTTSLLLYHILKAGGTNVGLAGNIGDSFAKQVAENDYDVYVLEI
                     SSFQLDGIVTLQANIAINLNITPDHLDRYNNNFSNYIDSKFRIIQNQTTEDALIYCFD
                     DPAITEKLKHAKVLAQQFPISLSKREFNQGAYLNK"
BASE COUNT          566 a          263 c          321 g          505 t
ORIGIN      
        1 cattaaagtt tttaaaaaga aaaaagaagg actaccaggg aagtataaaa tcgccggaca
       61 aattattctt ggattaattg ttggtctagt gatgtatttt aattctgata tcgtagtgcg
      121 agaaaaaata aaacccgata ctgaagtata cactaccatt gaccaatcag aatcttcatc
      181 aaaatttgtc tatcaacaaa caaggtcaac aaaaacctca ataccctttg ttaaaaacaa
      241 tgaatttgac tatgcaagtt tactaaaatg gattggaaaa gggtatgagt cgtgggctta
      301 tttaattttt atacctattg taatatttat aatagttgct gtatcaaatg gtgcaaattt
      361 aaccgatggc atggatggcc tggcaacggg cacgtcggcc ataattgggt tgacgcttgg
      421 gatactagcg tgggtttcag gcaatataat ctttgccaat tatttgaata ttatgtattt
      481 gccaaatgct ggtgaactca caatatttat tagtgcattt gttggtgcaa ctgtaggatt
      541 cttgtggtat aacacatatc cggcacaggt ctttatgggt gatacaggta gccttgctct
      601 tggaggaata attgctgttt ttgcaattat catccggaaa gagcttctaa taccgattct
      661 atgtgggata tttttggcag agagcctttc agtaattatc caggttagct acttcaaaca
      721 cactagaaag aaatatggta aaggcgttag aattttcaaa atgtcgccta ttcatcatca
      781 ttttcaaaaa ctaggttatc ctgaaccaaa gatcgtacaa agatttctga ttgtagggat
      841 ctttctggct gtattaacaa ttataacact taaactcagg taatgaaaaa taatcatgat
      901 tactcattat caaatagtta tacttggcgg aggcgagagc ggggttgggg ctgcattgtt
      961 agcaaagaaa aaaggaatat cggtttttat aagtgataat aataagttaa aacaaaaata
     1021 tattaacgtt cttaaacatt ctgaaattga ttttgaagaa ggtggtcata ccgaaaatct
     1081 gatactttct gctgatgaaa tagttaagag tcctggcatc ccggaaacgg ttgcaattat
     1141 tgaatctatt agggctaaaa agattcctat tatatctgaa attgaatttg ctgcaagata
     1201 tacctcagca aagcttattt gtattaccgg cagtaatggt aaaacaacaa catctctgct
     1261 tctgtatcat atattaaaag caggtggaac taatgttgga ttagcaggaa atataggcga
     1321 tagttttgcg aaacaggttg ctgaaaacga ttatgatgtt tacgtattgg aaataagcag
     1381 ttttcagttg gatgggatag taaccctgca ggcaaacatt gcaattaacc tgaacatcac
     1441 accggatcat ctcgaccgat ataacaacaa cttcagcaat tatatcgatt caaagttccg
     1501 cattattcaa aatcaaacaa cagaggacgc acttatttat tgctttgacg atcctgcgat
     1561 aacagaaaaa ctaaagcatg caaaagtgtt ggcacaacag tttcctatta gcctctctaa
     1621 aagagaattt aatcagggag catatctgaa taaaa
//
LOCUS       DASCQP010000465         3846 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001699699, whole genome shotgun sequence.
ACCESSION   DASCQP010000465 DASCQP010000000
VERSION     DASCQP010000465.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3846)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3846)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3846
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001699699"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..318
                     /locus_tag="QF480_07990"
     CDS             <1..318
                     /locus_tag="QF480_07990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013444715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease H-like domain-containing protein"
                     /protein_id="HJN06541.1"
                     /translation="NGIKLPGIINLAGKKPWEVRHLDTMELWKFGDYKHYTSLELLAA
                     LFNIPTPKDDIDGSMVGNVYWVEKDLDRIVKYCQKDVITVAQLLRRYLGLPMISEADI
                     VVS"
     gene            435..1946
                     /gene="dnaB"
                     /locus_tag="QF480_07995"
     CDS             435..1946
                     /gene="dnaB"
                     /locus_tag="QF480_07995"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: protein motif:HMM:NF004384.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HJN06542.1"
                     /translation="MEDTKKDTRKPSLKKSPSISTQLLAEHGKVQPQAIDLEEAVLGA
                     MMLEKDAVSAVIDILSPAVFYKDSHKKIMGAIASLFTKSEPVDILTVTNELKSTGELE
                     MVGGPYYITMLTSRIASTANVEYHARIILQKHIQRELIRISSVIIKDAFEDTTDVFDL
                     LDKAESNLFAVSESNLRRNFEDMPSLIKQAIVDIESAKDSDEHMRGVPSGYVDLDRIT
                     SGWQKSDLIILAARPSMGKTAFALNMARNIAVEFKKPIAFFSLEMSSVQLVTRLISSE
                     TELKSDKLKRGDLAGHEWQQLTDKVSNLVDAKMFIDDTPALSIFELRAKCRRLKQQHD
                     IQMVFVDYLQLMSGGTDNRGNREQEISHISRSLKALAKELDIPVMALSQLSRAVETRP
                     GQTKRPILSDLRESGAIEQDADLVLFIYRAEYYKIDEFEDGSPTQGVSEIIISKHRNG
                     AVGEVKLRFIADFARFEDYSHIGQRYSVEDVSSGIKNFPSKMNSMTDDESTPF"
     gene            2069..2914
                     /locus_tag="QF480_08000"
     CDS             2069..2914
                     /locus_tag="QF480_08000"
                     /inference="COORDINATES: protein motif:HMM:NF039709.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6263 family protein"
                     /protein_id="HJN06543.1"
                     /translation="MKTKIRISLWTLIGLFLFSISGVFAQKSVELQYNLNKGDKYLFI
                     TDIDMDMTFDARGTTTTMNSVMGIQMTSLINNIDGKEITQEITIDRIKMNQQIFGMEL
                     NYDSGDSSTFTSGMGAQIGEQMNKIIGATVMIIMDNHGNYKEVDFGSITDNSDLIDNF
                     GSGNSYAVYPEKKVKVGDSWETDIKPLEKSEMKVHVVYTLLKMTRKQAVIGVEGVLSG
                     NEVEGQEINLSGTTTGEMIVDRKTGMLIQSTIDTEIALDLERGDVKIPATMMSTSETN
                     VKKAN"
     gene            complement(2920..3783)
                     /locus_tag="QF480_08005"
     CDS             complement(2920..3783)
                     /locus_tag="QF480_08005"
                     /EC_number="1.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013756.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016646 - oxidoreductase activity, acting
                     on the CH-NH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HJN06544.1"
                     /translation="MLKINPIEYGNQKLAKLLLGSVAPRPIAFASTVDKEGNHNLAPF
                     SFYNAFGVNPSTLIFSPSRRSRDNTTKHTFENLKEIPEVVINAVTYDMVYQMSLTSTE
                     YEKGVNEFVKSGLTPVESSMVTPLRVAESPIQFECKVRELIEISGNPGSGNLVICEIV
                     CIHIDEKILDINGTINPDELDLVGRLGEDYYVRTSGSAKFRVPKPSSSHGIGVDALPE
                     HIRLSRYLTGNELGKFGNLDKLPTEDEIEIFRKDNKIISLKGETKTLHEYARTLISLD
                     KIKEALTILMV"
BASE COUNT         1274 a          624 c          760 g         1188 t
ORIGIN      
        1 aatgggataa agcttcctgg cataataaat cttgcaggga aaaagccttg ggaagttagg
       61 catttagata caatggagct ttggaaattt ggggattata agcactatac ttccttagag
      121 cttctcgctg cattattcaa tattcctaca cctaaagatg atattgatgg gtcgatggtg
      181 ggcaatgttt attgggtaga gaaagatttg gatcggattg taaaatattg tcaaaaagat
      241 gttataacag tagctcaact attaagaaga tatcttggcc taccaatgat ttctgaggcg
      301 gatatcgttg taagttagac gaaatctttt gttattatat aagttaatat tcaggtgttg
      361 aagtggttaa aaaaatatca gaatagttat caacacttta ttaactttct tccaatattt
      421 gtatttttga tcgtatggaa gatactaaaa aagataccag aaaaccgagt ttaaaaaaaa
      481 gcccaagcat ttctacacag ctgcttgctg aacatggaaa agtacagcct caggccattg
      541 atcttgaaga ggccgttctt ggagctatga tgctcgaaaa agatgctgtg agtgcggtta
      601 tcgacattct ttctcctgct gttttttata aggatagcca taaaaagatt atgggagcca
      661 ttgcaagttt gtttacaaaa tctgaaccag tcgacatact cactgttacc aacgaactaa
      721 aaagcacagg tgaacttgag atggtaggtg gcccttacta tattacaatg cttacaagtc
      781 ggattgcctc aactgcaaat gttgagtatc atgcaagaat aatccttcaa aaacatattc
      841 agcgggagtt aatccgtata tcttctgtaa ttattaaaga tgcctttgag gatacgacag
      901 atgtttttga tttgcttgat aaggctgaga gcaatctatt tgctgtttcg gaatcaaacc
      961 tgagacgaaa ttttgaagat atgccatcat tgattaagca ggcaatcgtg gatattgaaa
     1021 gtgctaaaga ctcagatgag catatgcgtg gcgtaccttc gggatatgtt gatttggaca
     1081 gaataacttc aggatggcag aaatcagacc ttatcatact tgccgcacgc ccatcaatgg
     1141 gtaaaacagc ttttgctctg aatatggcgc ggaatatagc agttgaattt aaaaaaccaa
     1201 ttgctttctt ctcacttgaa atgtcatcag ttcagcttgt tacaaggtta atatccagcg
     1261 aaactgaatt gaaatctgat aaacttaaaa ggggtgacct ggcaggtcat gaatggcaac
     1321 aattaacaga taaggtttct aatttggttg atgctaaaat gtttatcgat gatacaccag
     1381 cactatcgat ttttgaatta agggcaaaat gcagaaggtt aaagcaacaa catgatattc
     1441 agatggtttt tgttgattat ctacagctaa tgagtggtgg aactgataat aggggtaacc
     1501 gtgaacaaga gattagccat atttcaagat cactgaaagc cttagcaaag gaacttgata
     1561 taccggtaat ggctctgtct caattaagtc gtgctgttga aaccagacct ggtcaaacta
     1621 aacgacctat actatctgac ctacgagagt caggagctat tgaacaagat gctgacctgg
     1681 ttctgtttat ttatcgggca gaatattata aaattgacga gttcgaagat gggtcaccaa
     1741 ctcagggggt atcagaaatc ataatttcaa aacatcgtaa tggtgctgta ggagaagtga
     1801 aattgagatt tattgctgac tttgccagat ttgaagacta ctcacacatc ggacaaagat
     1861 attctgtaga agatgttagt tcaggaatta aaaatttccc atcgaaaatg aattctatga
     1921 ctgatgatga atctactccg ttttaaacct aatgctctta tagatattat ttgcatcaaa
     1981 ataataaaat taatactaaa ataaaatcgg gttataatcc aaaaaaggaa aagcacggta
     2041 ttaaccataa ttaaaaaaaa ctgaaagtat gaaaactaaa attagaattt cgctatggac
     2101 tttgattggt ctgtttctgt ttagcatttc aggagtattt gctcaaaaaa gtgttgagtt
     2161 acaatataat cttaacaaag gagataagta cctttttata acagacatag atatggacat
     2221 gaccttcgat gctaggggaa ctactacaac tatgaattcg gtgatgggaa ttcaaatgac
     2281 ttctcttatt aataatattg acggtaaaga aattactcag gaaattacaa ttgatagaat
     2341 aaagatgaat cagcaaatat ttgggatgga gctaaactat gactcagggg attcctcaac
     2401 tttcacttcc ggtatgggag cccaaatagg cgaacaaatg aataaaatta ttggtgcaac
     2461 tgtaatgatt ataatggaca atcatggcaa ttataaagaa gtagattttg gtagtataac
     2521 tgataatagt gatttgattg ataattttgg atcaggcaat tcctatgccg tttaccctga
     2581 aaagaaagta aaggttgggg atagttggga aacagatata aaacctttag aaaagagcga
     2641 aatgaaagta catgtagtat atactctctt gaagatgact cgaaagcagg ctgtaattgg
     2701 agttgaaggg gttctgtctg gaaatgaggt tgaaggacaa gaaattaatt tgtcagggac
     2761 aaccaccgga gaaatgatag ttgatagaaa aacaggaatg ctaattcaat caacaatcga
     2821 cacggaaatt gcgttggatc ttgaaagggg agatgttaaa attcctgcta ctatgatgag
     2881 cacctctgaa acgaatgtta aaaaagcaaa ctaaacagat tataccataa gtattgttaa
     2941 ggcttcttta attttatcta gtgatattaa agtcctagca tattcatgga gcgtcttggt
     3001 ttcaccttta aggcttatta ttttattgtc ttttctaaag atttcaattt catcttcagt
     3061 agggagctta tcaagatttc caaactttcc tagttcgtta cccgtaagat aacgacttaa
     3121 ccttatgtgt tctggcaagg catcaacacc tattccatgt gatgaacttg gtttaggtac
     3181 tctaaatttt gcacttccag atgttcttac atagtaatct tcacctagtc gccctacaag
     3241 atcaagttcg tctgggttga ttgttccatt tatatctaat atcttttcat caatgtgtat
     3301 gcaaacaatc tcacaaatga ctaaattgcc agaaccaggg tttccactta tttcaattag
     3361 ttcgcgtact ttgcattcaa attgaattgg tgattcagct actcttaagg gtgtaaccat
     3421 actcgattct actggtgtta accccgactt aacaaactca tttacacctt tctcgtactc
     3481 agtgctcgtc agactcatct gataaaccat atcataggtt acagcattta ttaccacttc
     3541 cggaatttct ttcagatttt caaatgtgtg cttagtagta ttatcacggc ttcgtcgtga
     3601 aggagaaaag ataagtgtcg aagggttgac accaaaagca ttataaaaac taaacggagc
     3661 taggttatgg tttccttctt tatcaacagt tgatgcaaat gctattggtc gaggtgccac
     3721 actgccaagc aatagcttgg ccaatttttg attaccgtat tcaattggat taatttttaa
     3781 cattgtgatt attttggtgg taatattttc gttacacatt ctccaaaacc tattcgataa
     3841 tcatca
//
LOCUS       DASCQP010000466         5356 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001701111, whole genome shotgun sequence.
ACCESSION   DASCQP010000466 DASCQP010000000
VERSION     DASCQP010000466.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 5356)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5356)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5356
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001701111"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1747)
                     /locus_tag="QF480_08010"
     CDS             complement(<1..1747)
                     /locus_tag="QF480_08010"
                     /inference="COORDINATES: protein motif:HMM:NF025092.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HJN06545.1"
                     /translation="MKARGTIYILIFSFAIMLLFGLQGNIVAQTATVEGKVTNSKGKA
                     IELANVSIVGKKGGTTTNKDGNFTLKVPANKDVTIAVTFVGFADNSMKLNLKPGETKL
                     LKIDLKVISTELPGFEVKDEQLRTQSMIRLNPKNAVLAPSLTEGLSDILVTLPGVSSS
                     NEMSSQYSVRGGNFDENLVYVNDIEIYRPFLVNSGQQEGLSFINSYLVSSILFSAGGF
                     GVQYGDKMSSVLDVKYRTPTEFGGSFSASLLGAELNFGGLAANRKLTYLVGTRYKTNK
                     YLLNSLQTQGEYQPEFMDIQSLITYKLSSRWNLSFLGYYSHNKYKVVPANRETDFGTF
                     QEVIRFKVYFDGNETDRYDLFQGGLTLEHKPNRNTNLKLILSAFNTDESETYDIQGQY
                     WIGQVENNPGSEEYGDAVQTQGVGTYLLHARNYFNASVISAEHRGTMIKDKINLKWGL
                     RYQNQTVDDKLREWEMVDSAGYSLPNPTDTPGNPNPQNPNFELKDFVSANNNLNTNKL
                     TGYLSNQWNLVRKNNDEVSFTVGLRANYWDFNNEFLLAPRANFSYKPAKNPNLVFRFA
                     TGIYYQTPFYREMRNV"
     gene            1906..>5356
                     /locus_tag="QF480_08015"
     CDS             1906..>5356
                     /locus_tag="QF480_08015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06546.1"
                     /translation="MRIILFLFILSVVGLSGQTTVDNINLPSSNGGGGSFIGSIIEAN
                     TKIFAYSADGISIYNSSGTFQEKIYFTETMGKFNPVYFNGWLYVPDQSIMVYNDEPGN
                     QYVYALTPKLKLLVINTVATGNPATHQYWLTSLSTIVGGGEAFLDNEFDSQDGRVILR
                     YDNDANTVNPADRHHRLYVLVNGRDKDPNNNQTGNFHEKRTIFGIYDIDYSIAPELSG
                     HTSLFYTEKNIPTDDYGAQINNYVFNEENNYFYLIRLGLRDDNAQPDPISTALIDIKN
                     ITPGEVEHVTTIQFENDGGVGWFKMGKVLYVNKPGVPGDPAVHKIIVLPYKSFSGVVN
                     NPRFCVIDGTTDDVKFFDCPSSMITDAVFLRSHNDLVLTYGPNNAEILEASPPLPNDA
                     YYNTNTFVLHYNSDDNFVLGSNYFDNDNSISTSDYDTNTAIHLTKFDESTAIISKKDG
                     IALLKHNGSDYAYSLLHGGESNFFGKGAVIENKAFINNTVKNGIEILIESNGSPVYSE
                     TEKTAYPAYHICANNDGSKMVFFNKLNSYNTGIYIYINSSGATFHYDISTPIGDIIYN
                     PFQDHFLISKFEHNNAEIIAIQASDYTTAHTISISNEQFVKEMFITPTGKLYITSGMQ
                     YNTNPKIHFIDAALPDYPIQETELLTGFDTYSEPFLSYFASFDYNTYDETTYATITIQ
                     EQKLPPYNTEPNSIFTIVDESPIPPPSKIIALTDDITNEINIDDYTYKTVCPGNFGAD
                     YNSQYYGKVFIVGYHLYAYNYLNPPSSQSGLLTDESYFIDIVYSKKHDQLFGVKETND
                     LSLEHRKFEIWKINIDGMGNIQTELVNPTNLPAIDGQIACMFANPYDGKIYIHRKVDA
                     AKLGDGQAALYAFDPDNPVWEITDLGMATYFPDYDHTVDIAMFFFNNRTTPYINPYTN
                     HIYIPNGGHSCVSKVGFTPNEALLLNDGEWAWLSFPRMNRDGDDAVPVNTVLLNNIEP
                     DGYLDESELENLPPESWVIEDNIYDGTQWQLTGDLINIQSTLGYKLKLLYGTTPENKW
                     VHLLGNVLDPAEDVNIYENYDNWVGYWLYESQSPFDAIPENVLDELTIIKAQTWCCVK
                     DWDYPDGYAVPYWICAVHEDDVSMDYGDMVILETNSDMSFQWQSTGNPSSIIDKDATE
                     YYQF"
BASE COUNT         1761 a          964 c          928 g         1703 t
ORIGIN      
        1 caacattacg catctcccta tagaaagggg tttggtaata aattccagta gcaaaccgga
       61 aaactaaatt aggattcttt gctggcttat acgagaaatt agcccttgga gcaagcaaaa
      121 attcattatt aaaatcccaa taattagccc ttagtcctac cgtaaaagaa acttcatcat
      181 tattttttct gaccagattc cattgatttg acaaatatcc ggtaagtttg ttagtgttca
      241 ggttattatt tgcacttaca aaatctttta actcaaagtt tggattttgg ggatttggat
      301 taccaggagt gtccgtaggg tttggtaacg aataacctgc tgaatcaacc atttcccatt
      361 cacgtaactt atcatctaca gtttggttct gataacgtaa accccacttc agattgattt
      421 tatcttttat catagtgccc ctatgttccg cagaaatcac gcttgcatta aaataattac
      481 gtgcatgcag caaatatgta ccaacccctt gtgtttgaac agcgtcacca tattcctcac
      541 taccgggatt attttctact tgtccaatcc agtattgtcc ttgtatatcg tatgtttctg
      601 attcatcagt attgaatgct gatagaataa gttttaagtt agtatttctg tttggtttgt
      661 gctcaagagt taatcccccc tgaaataaat cgtagcgatc agtttcgtta ccatcaaaat
      721 aaaccttaaa ccgtatcacc tcctgaaatg tcccgaaatc tgtttcacga ttggcaggaa
      781 ccactttgta tttattgtgc gaataatatc ccagaaaaga caaattccac ctactgctca
      841 acttataagt gattagagat tggatatcca taaactctgg ttggtattca ccttgagttt
      901 gcagactatt tagcaaatat ttgttcgttt tatatcttgt accaaccaga tatgtgagct
      961 ttctattagc tgctaaacct ccaaaattca gttcagcgcc aagcagacta gccgaaaatg
     1021 aaccaccaaa ttctgtaggg gttctgtatt tcacatctaa tactgaagac attttatcgc
     1081 cgtattgaac tccaaatcca cctgctgaga atagtattga agataccagg tatgaattaa
     1141 taaagctaag gccttcctgc tgccctgaat ttacaagaaa gggccggtat atttctatgt
     1201 cgtttacata aacgaggttt tcatcaaaat taccacctct aaccgaatat tgagaactca
     1261 tttcatttga tgaagaaaca cccggtaacg ttactaaaat atctgaaaga ccttctgtta
     1321 aagatggtgc tagaacagca ttcttggggt tcaagcgtat catactctgt gtccgcagtt
     1381 gctcatcttt aacttcaaat ccgggaagct ctgttgatat tactttaaga tcaattttca
     1441 acaatttggt ttcaccaggt ttgagattta atttcatact attgtcagca aagccaacaa
     1501 atgttactgc aattgtaaca tctttatttg caggcacttt tagtgtgaaa tttccatctt
     1561 tattagttgt tgttcctccc tttttaccaa caatggagac attcgcgagc tcgatagctt
     1621 tacctttact attagttacc ttaccttcaa cagttgcagt ttgagcaact atattacctt
     1681 gcaacccaaa taacagcatg attgcaaatg aaaatattaa tatatatata gtgcctctgg
     1741 ctttcattac atggtaaact taaaaggtgc aaatttatta taaactaatt agccatcgca
     1801 agttttttat atctttaacg gattcaatta acttaagacc taatattatg aaaagacaaa
     1861 agacaaaaga caaaagacaa aagacaaaag ttagcaatta gtaaaatgcg tattattctg
     1921 ttcctgttta tattatctgt ggtcggatta agtggacaaa caacagtaga taatattaat
     1981 ttgccatcaa gtaatggggg cggtggttca tttattggaa gtatcattga agcgaatacc
     2041 aaaatctttg catactcagc agatggtatt tcgatttaca actcttcagg tacatttcag
     2101 gaaaaaattt attttacaga aacaatgggc aagttcaatc ctgtttactt taacggatgg
     2161 ttgtatgtac ctgaccaaag tataatggtt tataatgatg aaccagggaa tcaatatgtt
     2221 tacgctctca ctcccaaact taaattgctt gttattaaca ctgttgcaac aggaaaccct
     2281 gcaacacatc agtattggtt aacctcatta agtactattg taggaggtgg tgaagctttt
     2341 ttagataatg aatttgactc tcaagatgga cgtgttatcc tcaggtacga taatgatgct
     2401 aatacggtta accctgctga tagacatcac cgattatatg tattggtgaa tgggcgagat
     2461 aaagacccta ataataacca aactggtaat tttcatgaga agagaacaat ttttggtatt
     2521 tacgacattg attatagtat cgctcccgaa ctgagtggac atacaagttt attttatact
     2581 gaaaaaaata taccaacaga cgattatgga gcccaaatta acaattatgt ttttaatgaa
     2641 gagaataact atttctattt gataagattg gggttaaggg atgacaatgc ccagccagat
     2701 cctatttcta ctgcattaat cgacataaaa aacataacac ctggtgaagt tgaacatgta
     2761 actactatac aatttgaaaa cgatggtggg gttggttggt ttaaaatggg taaagtgctg
     2821 tatgttaata aacctggtgt tcctggtgat cccgcagttc ataaaataat tgtattacca
     2881 tataaatctt tttccggagt tgtaaacaat cccaggtttt gtgttattga tggtacgaca
     2941 gatgatgtaa aattctttga ttgccctagt tcaatgatta cagatgcagt attcctaaga
     3001 tcacataacg atttagtatt aacttatgga ccaaataatg ctgaaatact tgaagcatca
     3061 cctccattgc caaatgatgc atattacaat accaatacgt ttgttctaca ttacaactca
     3121 gatgataatt ttgtgttagg atcgaattac tttgacaatg ataactcaat tagtacatca
     3181 gattacgaca ctaacacagc aatccactta accaaatttg atgaatctac tgctataata
     3241 agtaaaaaag atgggattgc gttgttaaaa cataatggtt cagattacgc ttactctctg
     3301 ttacatggtg gcgaatcaaa cttttttggc aaaggtgctg ttatagaaaa taaggcattt
     3361 attaacaata ctgttaaaaa tggaatagaa atactaattg aaagtaatgg atctcctgtt
     3421 tattcggaaa cagaaaaaac tgcatatcct gcatatcaca tatgtgctaa taatgatggc
     3481 tcaaaaatgg tgttttttaa taagctcaat tcatataata ccggtattta tatttatatt
     3541 aattcaagtg gggcaacttt ccattatgat atatcaaccc ctatcggtga tataatttac
     3601 aacccctttc aggatcattt tctgatttca aaatttgagc ataataatgc tgaaatcatt
     3661 gctatacaag caagtgatta tactacagcc cataccatta gcatatctaa tgaacaattt
     3721 gtaaaagaaa tgtttattac tccaacgggg aagctttata ttacttcggg tatgcaatat
     3781 aatacaaatc caaaaataca ctttatcgat gctgctcttc ctgattatcc aatacaagaa
     3841 acggaactgc taacgggatt tgatacctac tctgaaccat ttctaagcta ttttgcaagt
     3901 ttcgattaca acacttatga tgaaacaact tatgcaacaa tcacaatcca ggaacaaaag
     3961 ctaccgccct ataatactga accaaacagc atcttcacta ttgtagatga atctccaatt
     4021 cctcctcctt cgaaaataat tgcacttact gatgatatta ctaatgagat taatattgat
     4081 gattatactt acaagacagt ttgtcccgga aattttggag ccgattataa ctcacaatat
     4141 tatggtaaag tatttattgt aggatatcac ctatatgcat ataattacct gaatcctcca
     4201 tcatctcagt caggtctttt aactgacgaa agttatttca tagatattgt atatagtaaa
     4261 aaacatgacc aattgtttgg tgtaaaagaa actaatgact tatctttaga acatcgtaag
     4321 tttgaaatat ggaaaataaa cattgatgga atgggtaata tacaaactga attagttaac
     4381 ccaaccaact tgcctgccat agatggccag atagcttgta tgttcgcaaa cccatatgat
     4441 ggaaaaatat atattcatcg aaaggttgat gctgcaaaat taggggacgg acaagcagca
     4501 ctatatgcct ttgatcctga taatccggtt tgggaaataa cagatctcgg tatggctact
     4561 tattttcctg actatgacca tacagttgac atagcaatgt ttttctttaa taatcgtact
     4621 accccataca taaacccgta caccaaccac atctacatcc ccaatggtgg ccacagttgt
     4681 gtaagcaagg tggggtttac accaaacgaa gcccttctgc ttaatgatgg tgaatgggca
     4741 tggttatcat tcccacgtat gaacagggat ggagatgatg ctgttccagt taatactgtg
     4801 ttgttaaata atattgagcc agatggttat cttgatgaaa gtgaattgga gaacctacct
     4861 ccggaaagct gggtgattga agataatatt tatgatggta cacaatggca gctgacaggg
     4921 gacttaatta atatccaaag tacgcttggc tataaactta aattattgta cggcaccacc
     4981 cccgaaaata agtgggttca cctactaggc aatgtattag atcctgccga ggatgtaaat
     5041 atttatgaga attatgataa ctgggttggt tactggcttt atgagagcca gtcgccattt
     5101 gatgccatac ctgaaaatgt acttgacgag ttaaccataa ttaaagcaca aacctggtgt
     5161 tgtgtaaaag attgggatta tccggatgga tatgctgtac catattggat atgcgccgtt
     5221 catgaagatg atgtatcaat ggattatggc gacatggtaa tcttagagac aaattccgat
     5281 atgagttttc aatggcaaag tacaggtaat ccatcatcaa taattgataa agatgcaacc
     5341 gaatactatc aattta
//
LOCUS       DASCQP010000467         2492 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001705149, whole genome shotgun sequence.
ACCESSION   DASCQP010000467 DASCQP010000000
VERSION     DASCQP010000467.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2492)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2492)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2492
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001705149"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1047
                     /locus_tag="QF480_08020"
     CDS             <1..1047
                     /locus_tag="QF480_08020"
                     /inference="COORDINATES: protein motif:HMM:NF012398.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HJN06547.1"
                     /translation="LILSPWNYPFQLMVAPLIGDISAGNTAILKPSEISVATSSILKR
                     IINKTFDSGFIHVIEGDSTISQSLLKLDFDYIFFTGSQNVGKIVMQEAAKKLTPVTLE
                     LGGKSPCIVDEGVNLKLVARRIAWGKLLNSGQTCIAPDYLLVNSKIKDGLLKELKNVI
                     IDFYGKDASKSPDYPRIINEENIERLALLIENTNIYYGGNYNKVDRYFEPTIVDQVKL
                     EMPIMKQEIFGPILPVITFDELSEVIGIVNSLPKPLALYFFSRNKRKQSKIVENIAAG
                     AVNINDTIMHYSNNKLPMGGVGNSGMGSYHGRFSFETFSHQKPVVYKSNWLDIRIRYA
                     PYGNKLRWLKWLLR"
     gene            complement(1276..1824)
                     /locus_tag="QF480_08025"
     CDS             complement(1276..1824)
                     /locus_tag="QF480_08025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015532943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HJN06548.1"
                     /translation="MSEKYKFYNPDDMYFITPTVIGWVDIFTKSRYCELILNSLRFCQ
                     HNKGLVIHAWVIMSNHLHLIVSKSSDLVLQDILRDFKRFTSIEIIKLINESSDSRKTW
                     MLEIFSNAAANLKRVKDYKVWQDGNHPIALCTTEEMDQRLDYLHDNPVRAEIVNNQED
                     YIYSSAIDYTGGKGLLNIDLLE"
     gene            complement(1913..>2492)
                     /locus_tag="QF480_08030"
     CDS             complement(1913..>2492)
                     /locus_tag="QF480_08030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010265750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HJN06549.1"
                     /translation="EEFYTLQGEGYNMGKAAYFVRIGGCDVGCSWFDSKESWNVELFP
                     PADVDVVVNNVRNVPASTVVVTGGEPSLYPLDYFTSQLQNFGITTMVETSGAHKLTGS
                     WDWICLSPKKYSPPHNSIYKIANELKVIIKHKADLKWAEMNAELMNENTPLFLQPEWS
                     EVDNIIPVLTDYIMKNPKWRMSLQSHKYMGIP"
BASE COUNT          823 a          434 c          418 g          817 t
ORIGIN      
        1 ttaatattat caccatggaa ttatccgttt caattgatgg ttgcaccact cattggagat
       61 atttcggctg gtaacacagc aatattaaaa ccatcggaaa tttcagttgc tacttcaagt
      121 attcttaaaa gaataataaa taaaactttt gattcagggt ttatacatgt tattgaaggt
      181 gattcaacta tttcacaatc gttattaaaa ttagattttg attacatttt ttttactggc
      241 agtcagaatg tgggtaaaat tgtaatgcag gaagctgcaa aaaaacttac tcctgtaact
      301 ttagaacttg gtggaaaaag cccttgcatt gttgatgaag gagttaactt aaaattagtt
      361 gccagacgta tagcttgggg gaaattacta aattcagggc aaacttgtat tgctcctgat
      421 tatcttcttg ttaattcaaa aattaaggat gggttactta aagaattaaa aaatgtaata
      481 atagattttt acggtaaaga tgcttccaag agtccggatt atccgcgtat tatcaatgag
      541 gaaaatattg aaagacttgc attactaatt gagaatacaa atatttacta tggtgggaat
      601 tataataaag ttgacaggta ttttgaaccc actattgttg atcaggtaaa gttagaaatg
      661 ccaattatga aacaggaaat ctttggtcct attcttcctg ttattacatt tgacgaatta
      721 tctgaagtta ttggtattgt taattcttta cctaaaccac tggctcttta tttcttttca
      781 agaaacaaga gaaaacaaag taagattgtc gaaaatattg cagcaggcgc cgtaaatatt
      841 aatgatacaa taatgcacta ctctaataac aaacttccaa tgggtggagt tggcaacagc
      901 ggtatgggaa gttatcacgg acgtttttct ttcgagacat tctctcacca gaaacctgtt
      961 gtttataaaa gtaactggtt agatattcgc attcgatatg caccttatgg taataagttg
     1021 agatggttga aatggttgtt aagataattc tttcaatcaa ctccaattta aactagcgtg
     1081 cgaattttcg cgtgcttttg gaaataaatt gtaactctgt cactcgaaga attcttgcac
     1141 cagtaatagt attattgaag tggcttgtga gataacacga tcctagcgcg cgaatctttc
     1201 gcgtgctcac gaaattacat tgacaggaat gtcacgcgaa gaattcgcgc gccagtttgg
     1261 tagattcttg caaaattatt cgagtaaatc aatatttaac aaacctttac caccagtata
     1321 atcaattgca gatgaataga tgtaatcttc ctgattatta acaatttctg ctctaacagg
     1381 attatcatga agataatcca gtctttgatc catctcttca gttgtacaaa gggcaatagg
     1441 atggttacca tcttgccaaa ccttgtaatc ttttactctt ttcaagttag cagcagcgtt
     1501 actgaaaatt tcaagcatcc atgttttcct actatcacta ctttcattta tcagcttgat
     1561 tatttcaata gatgtaaatc gtttaaagtc tctaagaata tcctgaagga ctagatcaga
     1621 acttttactt acaatcaaat gaagatggtt cgacattatt acccaagcat ggattacaag
     1681 tcccttatta tgctgacaaa atcttaatga attcaatatg agttcacagt atcttgattt
     1741 tgtaaatata tccacccatc caataacagt tggtgtaata aaatacatat catcaggatt
     1801 ataaaactta tatttttctg acatttaaca aatttacaac attatgttgc accctaaact
     1861 agcactcgaa ttctgatcta gagcaagaag aattcgcgcg ccagataacg gattaaggta
     1921 ttcccatgta tttatggctt tgaagagaca tccgccattt tggatttttc attatataat
     1981 cagtaagcac gggaattata ttatctactt cactccattc aggttgtaag aataacggag
     2041 tattttcatt cattaattct gcattcatct cagcccattt taaatcggct ttatgcttaa
     2101 taattacttt cagttcattt gcgattttat aaatggagtt gtgtggtgga gaatatttct
     2161 taggagaaag acaaatccag tcccaactgc cagttagttt atgagctcca gaagtttcaa
     2221 ccatagtagt tattccaaag ttttgcaact gagatgtaaa ataatccaaa ggatataatg
     2281 agggttctcc tccagtaaca actactgttg aagcaggaac atttcttaca ttattaacaa
     2341 ccacatcaac atctgctgga ggaaaaagtt caacattcca agactctttt gagtcaaacc
     2401 aagagcaacc aacatcacat cctccaatac gaacaaagta agctgcctta cccatgttat
     2461 agccttcacc ctgcaaagtg taaaactctt cc
//
LOCUS       DASCQP010000468         1745 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001708307, whole genome shotgun sequence.
ACCESSION   DASCQP010000468 DASCQP010000000
VERSION     DASCQP010000468.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1745)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1745)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1745
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001708307"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            52..>1745
                     /gene="glmS"
                     /locus_tag="QF480_08035"
     CDS             52..>1745
                     /gene="glmS"
                     /locus_tag="QF480_08035"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006842598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004360 - glutamine-fructose-6-phosphate
                     transaminase (isomerizing) activity [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HJN06550.1"
                     /translation="MCGIVAYIGYKKAHPILIKGLHRLEYRGYDSAGISLLNGKIHTY
                     KTKGKVSKLEKFLKDQHVEGEIGIAHTRWATHGEPNQINAHPHSSQSKSISIIHNGII
                     ENYSTLKEELKARGYVFESDTDTEVLVNLIEDIRIKENVLLDEAVRIALSQVIGAYAI
                     VILSEEHPNTLIAARKGSPLVVGIGDDDFFLASDATPIVEYTKNVVYLEDEEIAVLTR
                     GEELKIKTIKNKDKTPYVQELEWNLSELEKGGYEHFMLKEIYEQPNSIKDSLRGRINP
                     ITGNVSLGGIIDYEQKLVNAKRIIIIACGTSWHAGLVGEYMIEDIARIPVEVEYASEF
                     RYRNPIISEDDVIIAISQSGETADTLAAIELAKKKGATILGICNVVGSSIARASHAGS
                     YTHAGPEIGVASTKAFTAQVAVLAVMTLRLAQLKGTIPKAKFMQMLQELDRIPEKVER
                     VLSTNGTTERIAKKYKDVNNFLYLGRGNNFPVALEGALKLKEISYIHAEGYPAAEMKH
                     GPIALIDENMPVVFIAPHLGIYEKVVSNIQEVKARKGKIIAIVTEGDTIIKKIADYV"
BASE COUNT          619 a          252 c          366 g          508 t
ORIGIN      
        1 ttttgaaatt tcctgttttc gtttatattt gtataattaa ataaataaaa catgtgtgga
       61 atagttgctt atataggata caaaaaggcg caccctatat taattaaagg gttacatcgt
      121 ttagagtacc gaggttacga tagtgcaggc atttcactgt taaatggtaa aattcataca
      181 tacaaaacca aaggaaaagt ttctaaactt gaaaagtttt taaaagatca acatgttgaa
      241 ggagaaattg ggatagcgca cactcgttgg gctacacatg gtgaaccaaa tcaaataaat
      301 gcacatccac actcctccca gtcaaaatca atttcaatta tccacaacgg aattattgaa
      361 aattattcca cattaaaaga agaattaaag gcgagaggat atgttttcga atcggatact
      421 gatactgaag tgttagtaaa cctaattgag gatattcgaa taaaagaaaa tgttcttctt
      481 gatgaagccg tgcgtattgc tttgagtcag gttattggtg cttatgcgat tgtgatcttg
      541 tcagaggaac atcctaatac attgatagca gcaagaaaag gaagtccgtt agttgttgga
      601 attggcgatg acgatttctt tcttgcgtct gatgccacac caattgtgga gtataccaag
      661 aatgttgttt atcttgagga tgaagaaatt gctgttctta caagaggtga agagttaaaa
      721 attaaaacta tcaaaaataa ggataaaaca ccttatgttc aggaattgga atggaatctg
      781 agtgaacttg aaaaaggagg atacgaacat ttcatgttga aagagatata cgaacagcct
      841 aactctatta aagatagctt aagaggaagg ataaatccta taactggcaa tgtttctctg
      901 ggtgggatta ttgattatga acaaaaacta gtaaatgcta aacgcattat tataatcgct
      961 tgtggtacat catggcatgc tggtttagtt ggtgagtata tgattgagga tattgcacgg
     1021 atacccgttg aagttgaata tgcctcagag ttcagatata gaaatccaat aattagtgaa
     1081 gatgatgtaa ttattgctat ttcgcagtca ggtgaaactg ctgatacatt ggctgccatt
     1141 gagttagcaa agaagaaggg tgcaacaatt cttggaatat gtaatgttgt tggttcatca
     1201 attgcgaggg cttctcatgc aggttcatac acacatgcag gacctgaaat tggggttgca
     1261 tcaacaaagg cttttacagc acaagttgcg gtacttgcag taatgacact aagacttgca
     1321 caacttaaag gaacaatacc aaaagccaaa tttatgcaga tgttgcaaga acttgacaga
     1381 atacctgaaa aagtggaaag ggtattaagt actaatggca cgactgagag aattgcaaaa
     1441 aagtataaag atgtaaataa ttttctttat ttaggcagag gaaataattt ccctgttgcg
     1501 cttgaaggag ctttaaaact taaagaaata tcatatattc atgccgaggg ttatccagct
     1561 gcagaaatga aacatggacc gatagccttg attgatgaaa acatgccagt tgtttttatt
     1621 gctccacact taggtattta cgaaaaagtt gtaagcaata ttcaagaagt taaagccaga
     1681 aaaggtaaaa ttattgcaat agtcactgag ggagatacaa ttattaaaaa gatagccgat
     1741 tatgt
//
LOCUS       DASCQP010000469         2518 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001713744, whole genome shotgun sequence.
ACCESSION   DASCQP010000469 DASCQP010000000
VERSION     DASCQP010000469.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2518)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2518)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2518
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001713744"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..619)
                     /locus_tag="QF480_08040"
     CDS             complement(<1..619)
                     /locus_tag="QF480_08040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004304915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HJN06551.1"
                     /translation="MGLFSFLTKEIAIDLGTANTIIIYNDKVIVDEPSIVALERNTGK
                     IIAVGKKAMMMHGKTHENIKTIRPLRDGVIADFQSAEYMIREMIKMIGMKSTLFPPAL
                     RMVICIPSGITEVEERAVKDSAEQAGAKEIKLIHEPMAAAIGIGIDVLEPTGNMIIDV
                     GGGTSEIAVIALGGIVNNTSIRIAGDDFNHDIEEYMRKQHNIIIGE"
     gene            complement(677..2191)
                     /gene="purH"
                     /locus_tag="QF480_08045"
     CDS             complement(677..2191)
                     /gene="purH"
                     /locus_tag="QF480_08045"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019539747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0003937 - IMP cyclohydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0004643 -
                     phosphoribosylaminoimidazolecarboxamide formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HJN06552.1"
                     /translation="MKKIETALISVYNKDGLDIILEKLNELDVKFISTGGTFNHIKKL
                     GYEANTVESLTSYPSILGGRVKTLHPKIFGGILARLDNETDNQNLTDYDIIPIDLVIV
                     DLYPFEDTLNLTDDEGEIIEKIDIGGISLIRAAAKNFKEVLVVPSSKLYNNFIELLES
                     KKGNTDIDDRKYFAAEAFNVSSHYDTAIFNWINPGNIDAFKESILGCVSLRYGENPHQ
                     QGRFYGKLDDIFSQIHGKAISYNNLLDLDAAINLINDFDETTFAVIKHNNACGLACRD
                     NLTDAWCKALAGDPVSAFGGVLVTNKNIDISTAKEINKIFFEIILAPSYNEDALAILK
                     SKKNRIILIHKQSAFSKIQYRSLLVGTLVQDKDQITENASNLKTVTKKSPTASEEEDL
                     LFANKLVKHTKSNTIVLAKDKQLVGSGTGQTSRVDALKQAIEKTCNFGLPIVGAVMAS
                     DAFFPFADCVEIADKAGITAVIQPGGSIRDQESIDYCDEHGMSMVMTGVRHFKH"
     gene            2311..>2518
                     /locus_tag="QF480_08050"
     CDS             2311..>2518
                     /locus_tag="QF480_08050"
                     /inference="COORDINATES: protein motif:HMM:NF024116.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJN06553.1"
                     /translation="MKIIKLIFESFLFAINALTINKVRTFLSLLGITIGIFSIISVFT
                     VFDSMENAIKSEINSLGNNVIFIQK"
BASE COUNT          762 a          478 c          387 g          891 t
ORIGIN      
        1 tttctccaat aataatattg tgctgtttac gcatatattc ctcaatatca tggttaaaat
       61 catctccagc tattcttatc gatgtgttat ttacgattcc gccaagtgca ataacagcaa
      121 tttcagaggt tccaccacca acgtcaataa tcatgttccc ggtaggctca agcacgtcaa
      181 tgcctattcc tattgcagct gccattggtt catggattaa cttaatttct tttgctccag
      241 cctgttcagc agaatctttt acagctcgtt cttccacttc agtaatgcca gatgggatac
      301 aaattaccat acgcagagca ggaggaaata gtgtgctttt catcccgatc atttttatca
      361 tctctcgtat catgtattca gcactctgaa aatctgcaat aaccccatca cgcaatggtc
      421 gtatggtctt tatgttttca tgagttttgc catgcatcat catagctttc tttccaactg
      481 cgataatttt tccagtatta cgttccaaag ctactattga tggctcatca acaatgacct
      541 tatcattgta aataattatt gtatttgctg tgccaaggtc aattgcaatt tccttagtga
      601 gaaatgaaaa cagtcccata tttatttacg ttttgttatt taatcctttt cctaaaactt
      661 tccttctaca ttcaatctaa tgtttaaaat gacgaacacc tgtcattacc atcgacatgc
      721 catgttcgtc gcaataatca atagattcct gatccctgat cgagcctcct ggctgaatca
      781 cagctgtaat tcctgctttg tcagcaattt caacacagtc ggcgaacgga aagaaagcat
      841 ccgaagccat tacagcacct actataggaa gtccaaagtt acatgttttt tcaatagctt
      901 gctttaatgc atccactctt gatgtttggc ctgttccaga gcccacaagt tgtttgtctt
      961 ttgcaagtac aatagtattt gatttggtgt gctttacaag cttattggca aaaagtaaat
     1021 cttcttcctc acttgcggtt ggactttttt tagttactgt tttcaggttg gaggcatttt
     1081 ccgtgatttg atctttatcc tgaactagtg ttccaactaa caacgaccta tattgaattt
     1141 ttgaaaatgc tgattgtttg tggataagaa ttatcctgtt cttctttgat ttcaaaattg
     1201 ccagtgcatc ttcattatag gatggagcaa gaataatttc gaaaaatatc ttattaattt
     1261 cttttgcagt tgaaatatca atattcttgt ttgtaactaa tacaccacca aatgccgaaa
     1321 ccgggtcgcc agctaacgct ttacaccagg catccgtcag gttatctcga caagcgagcc
     1381 cacaggcatt gttgtgtttt atcaccgcaa atgttgtttc atcaaaatcg tttatcaaat
     1441 tgattgctgc atcaaggtcc aacaagttat tataagaaat ggctttacca tggatttgac
     1501 taaaaatatc atctaattta ccataaaatc gtccttgttg atgaggattc tcaccataac
     1561 gtaggctaac acaaccgagg atactttctt taaaagcatc aatatttcca ggatttatcc
     1621 agttaaaaat cgcagtatca taatgtgagc tcacattaaa tgcttcagca gcaaaatact
     1681 tgcggtcgtc aatatcagta tttccttttt tgctttcgag cagctcaata aaattattgt
     1741 aaagtttaga agaaggtaca acaagcacct ctttaaagtt tttggccgca gctcttatta
     1801 atgatattcc accaatgtca attttttcaa ttatttctcc ttcatcatca gttaggttta
     1861 atgtatcttc aaacggataa agatcaacaa tcactaagtc gatagggata atatcatagt
     1921 cggtaagatt ttgattatcg gtttcattat ccaatctggc aagaatacct ccaaaaattt
     1981 tggggtgtaa tgtttttact ctgcctccta aaattgaagg ataagaagta agggattcaa
     2041 cagtatttgc ttcatatcca agctttttta tatgattaaa agtgccccct gtggaaataa
     2101 acttaacatc gagttcgttt agcttttcca gaataatatc aagaccatct ttgttataaa
     2161 cagatattaa agctgtttca atttttttca ttacaaataa ttttttggtt aatattgtta
     2221 aaatgaatac tgagttgcaa aataacaaga tttaattaaa acttattata cttttacata
     2281 catattttta cgaaaattga atttaaattt atgaaaataa taaagctcat ttttgaaagc
     2341 ttcctttttg ccattaatgc cctaacaatt aacaaggtaa gaacattttt atcgttactt
     2401 ggaattacta ttggtatatt ttcgataata tctgttttta ccgtatttga tagtatggaa
     2461 aatgccatta aaagtgaaat taattctctt ggaaataatg tgatttttat tcaaaaat
//
LOCUS       DASCQP010000470         6889 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001717438, whole genome shotgun sequence.
ACCESSION   DASCQP010000470 DASCQP010000000
VERSION     DASCQP010000470.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 6889)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6889)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6889
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001717438"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(50..970)
                     /locus_tag="QF480_08055"
     CDS             complement(50..970)
                     /locus_tag="QF480_08055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HJN06554.1"
                     /translation="MAYIVAGIQQLGIGVSNLKEARDWYQKILGYDVIIFDEAAEANL
                     MSRYTDNQIQTRHAVLTYNMKGGGGFEVWQNTSRTPEAPSFEIQLGDLGIFIGKIKAP
                     DIHRAFKQFQKSKVNIISEINNSPEGKPHFFIKDPYNNIFEIEQGTDWLLKQPKVTGG
                     NSGVIIGVSDMDRSIKLYSQILGYETVVYDQEKIFNDLTSLPGGNEKYRRVLLKHENK
                     RIGPFSPMLGDSTIELIQAVDHKVRKIYEDRLWGDLGYIHLCFDIIGMHDLKTECEAA
                     GYNFTVDSAVVFDRGEASGHFSNIEDPDGT"
     gene            complement(971..1765)
                     /locus_tag="QF480_08060"
     CDS             complement(971..1765)
                     /locus_tag="QF480_08060"
                     /inference="COORDINATES: protein motif:HMM:NF004825.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HJN06555.1"
                     /translation="MTFNDKTVWIIGASSGIGKALSITMAKLQANVVLSSRNVEELEK
                     VKNRCVHYTENCFLIPLDLEKNNDYSSNVKEVIQRYGSIDYLILNGGISQRSFAFETP
                     LKIDRRIMEINYFGNIAITKAVLPYMMEQKSGHIVVVSSVVGKFGFPLRSTYSASKHA
                     LHGYYETLRAEQASNRIKVTIVIPGRVKTNISYNAILKDGSRHNQLDDGQAQGISAES
                     CSKQIIKAIKKNKKEVFIGGKEIYLVWVRKFLPVLFYSFVNKIQPK"
     gene            complement(1913..3058)
                     /locus_tag="QF480_08065"
     CDS             complement(1913..3058)
                     /locus_tag="QF480_08065"
                     /inference="COORDINATES: protein motif:HMM:NF014237.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl hydrolase"
                     /protein_id="HJN06556.1"
                     /translation="MKNSMKRFVFVSAATVMGIALVLVFVFLGKQTSGPISGALDALG
                     NKIIEVEQDYLLSQREPIRSKELAWFQPYRHNIELMKNPDTIFLGVYENNYLQSFDKI
                     INLDESLKSTLPLIQIYTAWGDKDREKFPAIYAKTIYDLGSMPIITWEPWLNDFDREK
                     HNLHAVADPNVAGMSTVARGDYDFYIEEWAHEIAAFEHNIFIRFGHEMNDPYRYPWGP
                     QNNEPKDFVAAWQHVVNKFRELGVDNVIWIWAPQPAYLRYAEYYPGDEYVDWIGVGTL
                     NYGTVASWSKWWTFKDIYGNYYDWLDMLDKPMMITEMGCLRVGGNREEWFRNALTDLP
                     AKYPRLKAIILFNDDDDKTTLNKSLNWSIINDTSTCEVIRQTIKDTW"
     gene            complement(3070..4677)
                     /locus_tag="QF480_08070"
     CDS             complement(3070..4677)
                     /locus_tag="QF480_08070"
                     /inference="COORDINATES: protein motif:HMM:NF025017.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HJN06557.1"
                     /translation="MRTKQDRSDELWKFWEAQEVTKTGRFFFLILVIAGVISIVRFFD
                     WWFHPNHVASLPLFVILSLITWYGLLRLILIWINYLGIKKPKRAHAEDGLKVAIFTTS
                     SPGEPLSMFDKTLEACANIIYPHTTYLLDDTQDPAFKEVAEKHGAVWLELVGLPGAKA
                     GKVNKALQMIDEDFVLIMDPDHIPFPNFLDEVLGYFKDERVGFVQVAQTYYNQYRSFT
                     ARGAAEQTYTFYGPTMMGMYGYGTSVAIGANCTFRKKALDSIGGHGIGLAEDLITSIR
                     LHAAGWKSVFNPVVVSRGLVPEDFGSFCKQQLKWSRGVFEILFSELPRLSKTLSLWQL
                     ISYFAISTYYLVGVTIFLYVAIPFMYFWGGWLPAKMDFGEFLVNGTPIIVIALLVYLY
                     VQRWLSHPISERGLHWRGMVLKFATWPVFFLGALLAVVNVEIPYIPTAKKAVKGLSPY
                     TRPLIFQVILFILTLGYVIYDRLYVASEGILILTSQKVWGMFAFAFVSIIMIIGGIYA
                     AYESRDLEPEEPWKKIDLKKIKIRRKS"
     gene            complement(4677..6167)
                     /locus_tag="QF480_08075"
     CDS             complement(4677..6167)
                     /locus_tag="QF480_08075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HJN06558.1"
                     /translation="MAFIIFSFSVTIIAQNELVDNTLDKSRQLIDAKKFSEAADVLGS
                     FEDQYPGNIYVERLYAQTLFWLHDFDLASTIYERAIGFHPNNMDVKYEYAIMLFNYKK
                     YEYAKKLLIEYVSVNKYNGEAQLLLGKIYYYQRQFKEATIHLENAITLNPDDNMIKEL
                     YQQIYRIIAPQLSIGGRYRIDDQPMHAYGPSIKFNWYRSDILDLGISGNMLRYSDIPT
                     SNLIASVQLSNSFNIASAGINLKMSVGGIYSKIGSDVDWIGGIHLVKKFNRPVQIDLM
                     VERKNYDYTVSSVERDSILLVSRLALNISIGKKDNWNGLIGAQSNIFPDNNYVNSYYL
                     WFLSRPVVVSNFKFYFGYSFNYMNSKEDRFEAVDSLSQIISNYTDKIEGIYNPYYTPM
                     NQMSNSLLVNIKYQIGSSTEIYGHTSIGLFSKIKAPYLYLDKNDFDETVIVTGYSNQR
                     YVPLDLGVSLQSQLSKKVDLTISYSYVSTYYFLTNNFNVGIKLYLK"
     gene            6534..>6889
                     /locus_tag="QF480_08080"
     CDS             6534..>6889
                     /locus_tag="QF480_08080"
                     /inference="COORDINATES: protein motif:HMM:NF021497.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2219 family protein"
                     /protein_id="HJN06559.1"
                     /translation="MRLSLVILFLILSILVRTQNEITHNIVEITVDNDLVFLNDRYYS
                     NGVTLKIYSPTIKKSPINRILLPSDIDEIIYYALSITHHLYTPDEVSTSEIQLTDHPY
                     ATYLLLGNSKMSFNYK"
BASE COUNT         2283 a         1337 c          995 g         2274 t
ORIGIN      
        1 atccaatttt ctttatgatg ggaattttga gtgtctcacc aaattcagtt tatgtcccat
       61 caggatcttc aatattagag aagtgtcccg aagcttcgcc cctgtcaaaa acaactgcac
      121 tgtcaactgt aaaattatat ccagcagctt cacactccgt tttcagatca tgcattccaa
      181 ttatatcaaa gcatagatgg atatacccta aatctcccca aagtcgatct tcatatattt
      241 ttctaacctt atgatctaca gcctgaataa gttcaatcgt gctatcaccc aacatagggc
      301 taaatggtcc tattctcttg ttttcatgct ttagcagtac tcgtctgtat ttctcatttc
      361 cacctggcaa acttgtcaaa tcattaaaaa tcttctcctg gtcataaaca acagtttcat
      421 aacctaaaat ttgagagtat aactttatgg atctatccat atcgctaact ccaattatta
      481 cgcctgaatt tccaccggtt acttttggtt gttttagaag ccaatctgta ccttgttcga
      541 tctcaaaaat gttattgtat ggatctttta taaaaaaatg tggtttacct tccggagagt
      601 tatttatttc agaaattatg ttgactttac ttttttgaaa ctgtttaaat gccctatgta
      661 tatcaggggc ttttatcttg ccgataaaaa tacccaaatc acctagttga atctcaaaag
      721 aaggtgcttc cggagttcga cttgtatttt gccaaacttc aaatccacct ccccccttca
      781 tattataagt aagtacagca tggcgtgttt gaatttgatt atcagtatat cgtgacatca
      841 aattagcctc tgctgcttca tcaaaaatga taacgtcgta accaagtatt ttttgatacc
      901 aatcacgtgc ttcttttaaa ttcgaaaccc caattcctaa ttgctgtatc ccagctacaa
      961 tatatgccat ttatttcggc tgaattttgt tcacaaagct ataaaaaaga acaggtaaaa
     1021 attttctaac ccaaactaag tagatttcct tgccaccaat aaacacttct ttcttatttt
     1081 ttttaatggc cttaataatt tgtttagaac aagattcagc actaatacct tgtgcctgac
     1141 catcatccaa ttgattatgc cgactcccat ccttcaaaat tgcattgtat gaaatattag
     1201 ttttaacacg accaggtata acgattgtaa cctttattcg attacttgct tgttcagctc
     1261 taagagtttc atagtaacca tgcagtgcat gtttagaagc cgaataagta gatcgaagag
     1321 gaaatccaaa cttaccaacg acggagctca ctacaacaat gtgtccagat ttttgttcca
     1381 tcatataagg caagacagcc ttagtaatag caatatttcc aaaataatta atttccatta
     1441 tacgacggtc tattttaagt ggtgtctcaa atgcaaatga tctttgactg atacctccgt
     1501 ttaaaattaa ataatcaatt gagccatatc tttgtataac ttctttaaca ttagagctat
     1561 agtcattatt cttctctaaa tccaatggga tgaggaagca gttttcagta taatgcacac
     1621 aacgattctt aaccttttct aactcttcaa cattacgaga tgaaagcaca acatttgcct
     1681 gaagtttggc catagttatt gaaagtgcct ttccaatacc tgatgaggct ccaattatcc
     1741 aaactgtttt gtcattaaac gtcatcctaa tattaattaa tcagcacatc gaaattagaa
     1801 tgtctaaaaa tatcaaataa ttattactat cagtcgattt caacaaagat taaattactt
     1861 agtcgaaatg ataatatttt gaagtgcaga taaagcactc gttaggctcc cattaccagg
     1921 tatctttaat agtttgacgg attacttcac aagttgaagt gtcgttaatt atgctccagt
     1981 taagagactt gtttaatgtt gttttatcgt catcatcatt aaatagtata atagccttta
     2041 atcttggata ctttgctggt aaatctgtaa gagcatttct gaaccattct tctctattac
     2101 ctccaactcg taggcatccc atttcagtaa tcatcatagg tttgtcgagc atatctagcc
     2161 aatcataata gttgccatat atatctttaa atgtccacca tttagaccaa gaggcaacag
     2221 taccataatt taaggttcca actcctatcc aatcaacata ttcatcacca gggtaatatt
     2281 cggcataacg caaataggca ggctgaggtg cccaaatcca gattacgtta tccactccta
     2341 actcccggaa tttattaacg acatgttgcc aagcggcaac aaaatccttt ggttcattat
     2401 tctgagggcc ccatggatat ctgtaaggat cattcatttc atgtccgaat ctaatgaaaa
     2461 tattatgttc aaaagcagct atttcatgag cccactcctc aatatagaaa tcataatcac
     2521 cacgagccac agtagacatc cctgctacat ttggatcagc aacagcatgt aaattatgtt
     2581 tttctctatc aaagtcattt agccatggtt cccaggttat tataggcatt gagcccaaat
     2641 cgtaaattgt ttttgcataa attgctggaa acttttctct atccttatca ccccaggcag
     2701 tataaatttg aattagtggt aaagtggact ttagtgattc atcaagattt attattttat
     2761 cgaaagactg cagataatta ttttcataaa ccccaagaaa aattgtatcc ggatttttca
     2821 tcaactcaat attatgccta tatggttgaa accaagccag ttctttcgat cttattggtt
     2881 ctcgctgact aaggaggtaa tcttgttcaa cttcaattat tttatttcct aaagcatcta
     2941 atgctccaga aatagggcca cttgtttgtt ttccaagaaa gacaaataca agtactaatg
     3001 caatacccat tactgttgct gcactaacaa aaacaaaacg cttcatcgaa ttcttcatct
     3061 ctatatattt taactctttc ttcttatctt tattttttta agatcaatct ttttccaagg
     3121 ttcttccggt tccaaatcac gtgattcata agcagcataa atccctccaa taatcataat
     3181 tattgacaca aatgcaaaag cgaacattcc ccaaactttt tggcttgtaa gtatcaatat
     3241 tccttcagaa gccacatata acctatcata aattacatac cccaaagtta atatgaacaa
     3301 tataacctga aaaattaacg ggcgcgtata tggactcaac ccttttactg ctttttttgc
     3361 agtaggtata tatggtattt ctacgtttac aacagcaagc aatgcaccaa gaaaaaacac
     3421 aggccaggtt gcaaatttca acaccatccc acgccagtga agtcctctct cagatatagg
     3481 atgacttagc cagcgttgta catataaata tactaataat gcgataacaa taattggtgt
     3541 gccgttgact aaaaactccc caaaatccat ttttgcaggc aaccatcctc cccaaaaata
     3601 cataaatggt atagccacgt acaaaaaaat cgttactcct accaaataat atgtagagat
     3661 agcaaaataa gaaattagtt gccacaagct tagtgttttt gataatcgcg gcaattcact
     3721 aaaaagtatc tcaaatactc cgcgagacca ttttaattgt tgcttacaaa acgaaccaaa
     3781 atcttcaggt acaagaccgc gactaacaac tacggggtta aaaacggatt tccatccagc
     3841 agcatgaagc ctaatagatg ttattaaatc ttctgccaaa ccaattccat gcccaccaat
     3901 agaatccaat gcttttttcc ggaaggtaca gtttgcacct atagccacgc ttgtcccata
     3961 accgtacatg cccatcattg ttggaccata aaaagtatag gtttgttctg cggctccacg
     4021 tgcggtaaac gaacgatact gattgtaata tgtttgtgca acttgcacga aaccaaccct
     4081 ttcgtcttta aaatagccta gcacttcatc aagaaagtta gggaaaggaa tatgatcggg
     4141 atccataatt aacacaaaat cctcatcgat catttgaaga gctttattta cttttcctgc
     4201 tttcgcacct ggtaaaccaa ctagttctaa ccaaactgct ccatgttttt cagccacttc
     4261 cttaaaagcg gggtcctggg tatcatctaa taaataggtt gtgtgaggat aaatgatatt
     4321 tgcacaagct tcaagagttt tatcaaacat acttagtggt tctcccggtg aactagtagt
     4381 aaaaattgca actttcagcc cgtcctcagc atgtgctctt tttggtttct ttatcccaag
     4441 ataatttatc caaattaaaa ttaatcgtag tagaccgtac catgtaatta atgaaagaat
     4501 aacaaataat ggtagtgaag ccacatgatt agggtgaaac caccagtcaa aaaatcgaac
     4561 tatacttatc acaccagcaa taacaagaat aaggaaaaag aaacgtccgg ttttggtaac
     4621 ttcttgtgcc tcccaaaact tccataactc atccgaccta tcttgttttg ttctcattat
     4681 tttaggtata atttaatccc tacattaaaa ttattggtta agaaataata tgttgataca
     4741 tatgagtacg aaatagttag atctactttt ttagataact gggattgcaa agaaactcct
     4801 aaatcaagtg ggacatatct ttgattacta taaccggtta cgataactgt ttcatcaaaa
     4861 tcatttttat caaggtataa atacggggct ttaattttag aaaacaatcc tattgatgta
     4921 tgtccatata tttccgttga tgagccaatc tggtacttaa tatttactaa taaagaattc
     4981 gacatctgat tcattggagt ataataagga ttatatatcc cttcaatttt atccgtgtaa
     5041 ttgcttatta tctgtgatag gctatcaact gcttcaaatc ggtcctcctt tgaattcata
     5101 taattaaaac tataaccaaa ataaaatttg aaattcgaaa caacaaccgg acgacttaga
     5161 aaccatagat agtaagagtt aacataatta ttatctggaa atatattcga ttgagctcca
     5221 attaatccgt tccaattatc cttcttacca atggaaatat ttaatgcgag tcgtgaaact
     5281 aacaagatgc tatctctctc aacactgctc actgtataat cataattttt tcgttctacc
     5341 atcaaatcaa tttgaacggg tctattaaat ttttttacta aatgaatacc gccaatccaa
     5401 tcaacgtcag atcctatttt agagtaaatt ccaccaacag acattttcaa attgatgcca
     5461 gcactggcaa tattaaaact attagaaagt tgcactgatg ctattaaatt tgaagtcgga
     5521 atatccgaat acctcaacat gtttcccgaa ataccaagat caagaatatc cgaccgatac
     5581 cagttaaact ttatgctggg accataggca tgcattggct gatcatcaat acgataccta
     5641 cctcctatag ataattgagg agctataata cgataaattt gttgatacag ttctttgatc
     5701 atattatcat caggatttag tgtaatcgca ttttcaagat gtatagtagc ttctttaaat
     5761 tgcctttgat aatagtaaat tttacctaat aatagttgag cttctccatt gtatttattg
     5821 acagaaacat attcgattaa tagttttttg gcatattcat attttttata attgaacaac
     5881 attattgcat attcatattt aacatccata ttgttaggat gaaagccaat agctcgttca
     5941 taaattgttg atgccagatc aaagtcatgc aaccaaaaca atgtttgtgc atacaatcgt
     6001 tctacataaa tgttaccagg gtattgatct tcaaaagatc ctagaacatc tgctgcttca
     6061 gaaaatttct tagcatcaat taattgccta gatttatcta aagtattatc taccagctca
     6121 ttttgagcga taatagtaac actaaatgaa aaaatgataa atgccaaaat aggcaatttg
     6181 aaccattgtg cttttaaatt cagcaaaaga tttcccatat taatatatcc catttagttt
     6241 ctatcattac ctaaattaaa ggatgcaaat atacaacctg tagtgaaatt agtaaaaatg
     6301 tgtaattgag ttaataactt gaaaacaata ataaaattat tgcatttcaa tttttaatat
     6361 tattataatt caagaacgac tgcttcaaat ctgtagttta gaaattatga aaggacttat
     6421 tatgtcatta taaaaattgc ttcagagaga caattatttg agtgtgcttc ttaaaatatt
     6481 ttttctactt ttacaagata ggtttgtaat atgttttcca taagatattt ataatgagat
     6541 tatcactggt aatattattc ttgatcctat ctattcttgt aaggactcag aatgaaatta
     6601 cccacaatat tgttgaaatt acggttgata atgatcttgt atttcttaat gacaggtatt
     6661 attctaatgg agttacttta aagatttatt caccaactat taaaaaatca ccaattaata
     6721 gaatcctgtt gcctagcgat attgacgaaa taatttatta cgcactgagt ataacccatc
     6781 acctttatac acctgatgaa gtatcaacat cagaaattca attgacggat catccgtatg
     6841 caacttatct attgttgggt aatagtaaaa tgtcgtttaa ttacaagaa
//
LOCUS       DASCQP010000471         1544 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001718121, whole genome shotgun sequence.
ACCESSION   DASCQP010000471 DASCQP010000000
VERSION     DASCQP010000471.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1544)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1544)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1544
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001718121"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            283..684
                     /locus_tag="QF480_08085"
     CDS             283..684
                     /locus_tag="QF480_08085"
                     /inference="COORDINATES: protein motif:HMM:NF012780.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HJN06560.1"
                     /translation="MTTKRSFQSVRDVMTKKIVFVDGMATAKEAVEIMRSEMVEALIV
                     KKRNPQDAYGIVIVRDFIKGVIIQDKNSEEVNVFEIMTKPAISVPADMDVRYVANLLI
                     KVGLRMAPVEVNGEYIGMVSLSDLILENLLF"
     gene            958..>1544
                     /locus_tag="QF480_08090"
     CDS             958..>1544
                     /locus_tag="QF480_08090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007210908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF21 domain-containing protein"
                     /protein_id="HJN06561.1"
                     /translation="MALLFFYLSIALFVSFLCSITEAVLLSTPQSFLIVKQEEGNAWA
                     KIFIELKSSIDKPLSAILSLNTVAHTVGAAGVGAQAVYLFGEVYFGIVSAILTLLILV
                     ISEIIPKTIGAQYWRSLARISSYFIRGMIIITYPLVMMSSVITRVFTKSENKQSTSRE
                     EISALASIGANEGIFNKKEYKIIQNLLRLRNVKVT"
BASE COUNT          535 a          208 c          293 g          508 t
ORIGIN      
        1 ttgtgtttct tgtagaagaa cacgtagttg aaaaccttat gaatgttata caattggctg
       61 gcaaatttca tgaaccagga acaggcattg cttttgtgtt accaatagaa catgttgccg
      121 gtctggaaag tcaaatgaaa aaattcaagg atcaggcccg taaaaagtat ttttaaagaa
      181 tcaagaatgg ttaatcatat tttataaata tgaaaattgg aatggtgtac aaataatatt
      241 tactgagttt atttaatgga ataaaatttt aaaaaaattg acatgactac taaaagaagt
      301 tttcaaagtg taagggatgt aatgacaaaa aaaatagttt tcgttgatgg tatggcaacc
      361 gctaaagaag cagtagaaat tatgcgaagt gaaatggttg aagctctgat cgttaaaaaa
      421 cgcaacccac aggacgcata tggtattgtt attgtccgtg attttattaa aggcgtcatt
      481 attcaggata aaaattctga agaggttaat gtgtttgaaa tcatgacaaa gcctgctata
      541 agtgtaccag cggatatgga tgtgagatat gtagcaaacc tactaataaa ggtcggatta
      601 aggatggctc cggttgaggt taatggtgaa tatataggaa tggtttcact ttcggattta
      661 atattggaaa atttattatt ttagtaacta atcagtgtat tatcgaaaaa tttaaatatt
      721 gatgattatc taattacata aactaaccga aatattggaa acataattgc aatgcctatg
      781 ataggttatc caacaggcag gagtattaag caaagcacgc tattgtcaat atgtatgata
      841 tttagcacat tgcgcacatt gcgattttca ttgcgttctt tgcggtaaat ttaattagtt
      901 gatattacgc ttttaataaa cactgttaat tatagtttta acttttatag aagaaacatg
      961 gcattactgt ttttctactt gtctattgct ttatttgtgt cctttctatg ttcaatcacg
     1021 gaagcagttt tgctttccac gccacaatct ttcctgattg taaaacaaga agaaggtaat
     1081 gcatgggcaa aaatatttat cgaattaaaa agcagcatcg ataaaccatt atctgcaatc
     1141 ttgtctctga atactgttgc tcatacagta ggggcagcag gagttggtgc ccaagctgtt
     1201 tatctgtttg gtgaagtgta ttttggaata gtatcagcga ttcttacctt attgatactt
     1261 gtaatatctg aaataattcc aaaaacaatt ggtgcacaat actggaggtc cttagccagg
     1321 atttcatcat attttatcag aggtatgatc attattactt atccattagt aatgatgtcg
     1381 tctgttatta ctcgtgtctt caccaaaagt gaaaataaac aatctacaag tagggaagaa
     1441 atatcagctt tggcaagtat tggtgctaat gaaggaatat ttaataaaaa agaatataaa
     1501 atcattcaaa atttacttag gcttagaaat gtaaaagtta ccga
//
LOCUS       DASCQP010000472         3189 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001721271, whole genome shotgun sequence.
ACCESSION   DASCQP010000472 DASCQP010000000
VERSION     DASCQP010000472.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3189)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3189)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3189
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001721271"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1505
                     /locus_tag="QF480_08095"
     CDS             <1..1505
                     /locus_tag="QF480_08095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013613765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="pyruvate formate lyase family protein"
                     /protein_id="HJN06562.1"
                     /translation="TFYKKEIDEGTLSKERAIELLSAFWIKFNNHPAPPKIGVTAKES
                     STYTDFCLINLGGLKEDGSDAVNELTTIILDVIEEMRLLQPSSMIQVSKKNPDSFITR
                     AAHIIKTGFGQPSVFNTDAIIQQLLYQGKSIKDARNGGASGCVETGAFGTESYILTGY
                     FNLVKIFEITMHDGIDPLTGKKVGIRTGNMSKFNSFEQVINAFEKQVQYFVDIKIKGT
                     NIIDRIWADNIPVPFLSLLIDDCIEKGKDYNNGGARYNTSYIQGVGLGSLTDILTSIR
                     FNVFDENKINFGELVKATKENFIDQLEIRNKLINHTPKYGNDDNYADKQARTIFDIFL
                     NAVNGRPNTKGGHFRINMLPTTSHVYFGSVTGATPDGRLAHKPLSEGISPFQSADRKG
                     PTAVVKSASKIDHLITGGTLLNQKFTPALLEDKKGLDSLVHLIRAYFRMDGHHIQFNV
                     VTADQLREAQKHPEEHKDLIVRVAGYSDYFNDLGEELQNEIIRRSEHAEY"
     gene            complement(1539..2987)
                     /locus_tag="QF480_08100"
     CDS             complement(1539..2987)
                     /locus_tag="QF480_08100"
                     /inference="COORDINATES: protein motif:HMM:NF017545.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gliding motility-associated C-terminal
                     domain-containing protein"
                     /protein_id="HJN06563.1"
                     /translation="MPRKSLIISIAFILTFLQAQSQECETLFDLTQWSKEGTPNAYWK
                     VLSSTEAIDTTWIFPASFFVSPNEMINVLIRGKVTVVEDRDNDFIGIVFGYKKPTILE
                     EDNTYNFYLFDWKSEQEKSNSVNANQGFRLSYYNGYFTREDQHAYFVGAVNNPPQRKL
                     LETKYGDTLGWRPFREYEIELRYTSNLIQISVDGKKIFEHEGCFQQGRFGFYCMSQAY
                     ALFQDFTYQQFVDFYPSKETACVDEDIVFYPYDADCGGVPGFINSLYWNFGGGTTSAE
                     ITPSHSYSQPDVYNVELIVHKNDDCSDTIIKDVTIYPNPVVNLGDDNNLPACSTITLD
                     ADNPGSSYLWSTGETTQTIELKNLDTDTIVWVVVTSSGCSNNDTIFITVESIQEQLYF
                     PNAFTPNFDGENELFAPIGNTDNIGKYHMMIYNRWGQKIYETTDPNSGWDGTYNNIPS
                     PLGTYVYKVSYRTEGCVEERDYSESATITLIK"
BASE COUNT         1039 a          540 c          585 g         1025 t
ORIGIN      
        1 atacatttta taagaaggag attgatgaag gaactttatc aaaagaaaga gccattgaat
       61 tactgtcagc gttttggatc aagttcaata atcatcctgc acctcctaaa attggggtga
      121 ccgcaaaaga gagtagtact tataccgatt tctgtcttat caatctcggt ggtctcaaag
      181 aggatggtag tgatgccgta aatgaattaa caactataat actagatgta attgaagaga
      241 tgcggttatt gcagccaagc tcaatgatac aggtcagcaa gaaaaatcct gatagtttca
      301 ttacacgtgc agcacatatt ataaaaaccg gatttggaca gccatcagtt tttaatactg
      361 atgctataat tcagcaacta ttatatcaag gaaagagcat aaaggatgcg cgaaatggag
      421 gtgcaagtgg ttgtgtggag actggtgcat ttggaacaga aagttatatc cttactggat
      481 attttaattt ggtcaagatt ttcgaaataa ccatgcatga tggaattgat ccactcactg
      541 gtaaaaaagt tggtattaga actggtaata tgtccaaatt taattcattc gagcaagtga
      601 taaatgcctt tgaaaagcag gtgcaatatt ttgtcgatat aaaaatcaaa ggcacaaata
      661 ttatcgatcg catttgggct gataatattc ctgttccgtt tctctcatta ttaattgatg
      721 attgcattga gaaaggaaag gactataata acggtggagc ccgatataat acaagttata
      781 ttcaaggagt tggacttgga agccttacag atatcttaac atcaattaga tttaacgttt
      841 ttgatgagaa taaaataaat tttggtgaac ttgttaaagc aacaaaagag aactttatag
      901 atcaacttga aataagaaat aaactaatca atcatactcc aaaatatggc aatgatgata
      961 attatgctga caaacaagct agaaccatat ttgatatttt tctaaatgct gttaatggac
     1021 gtccaaatac gaaaggcgga cattttcgta ttaatatgtt gccaactaca tctcatgtgt
     1081 attttggcag tgtaacaggt gctactcctg atggtagatt ggctcataaa cctttgtcgg
     1141 aagggatatc cccctttcag agtgctgaca gaaaaggacc aacagcagtc gtgaaatccg
     1201 catcaaagat cgatcatcta ataacaggtg gaacattact taaccaaaag tttactcctg
     1261 cattgctaga agataaaaag ggattagatt cacttgtgca tcttattagg gcgtatttta
     1321 gaatggatgg ccatcatatt cagtttaatg ttgttaccgc tgatcaatta cgtgaggcac
     1381 aaaaacatcc ggaagagcat aaggacctta ttgttagagt tgctggttat agtgattatt
     1441 tcaatgacct tggggaagaa ctacagaatg agattattag aagatctgag catgctgagt
     1501 attaatctgc tgagtttcac gagataatta taattgttct atttaataag agttatcgtt
     1561 gcggactccg aatagtctct ttcctcaaca caaccttcag ttcggtagga tactttgtat
     1621 acatatgtcc ccaaaggtga aggtatatta ttatatgtgc catcccaacc ggagttaggg
     1681 tctgtagttt catatatttt ttgtccccat cggttataaa tcatcatatg atatttacca
     1741 atattatcag tgttaccaat tggagcaaat agttcatttt ctccatcaaa attaggtgta
     1801 aatgcattcg ggaaatatag ctgttcctga attgactcaa cagtaataaa aattgtatcg
     1861 ttgttggagc aaccgctact agtaacaaca acccatacaa tagtgtctgt atcaaggttt
     1921 ttcagctcaa tagtttgggt ggtttctccg gttgaccata aataagatga accgggattg
     1981 tcagcatcca aagttattgt tgagcaggct ggcaaattat tatcatcccc caaattcaca
     2041 accggatttg gataaatcgt tacatctttt atgattgtat cactgcaatc atcattttta
     2101 tgaacgatca attcaacatt gtatacatca ggttgtgagt aagaatgaga tggagtaatt
     2161 tctgcacttg ttgtgccgcc cccaaaattc caatatagtg aattgataaa accaggaacg
     2221 cctccgcagt cagcatcgta aggatagaaa acaatatctt catcaacaca ggctgtctct
     2281 tttgagggat aaaaatctac aaattgctga taagtgaaat cctggaatag tgcatatgcc
     2341 tgagacatac aatagaaacc aaatcttccc tgttgaaaac atccttcatg ttcaaatatt
     2401 tttttcccat ccactgagat ctgaattaga tttgaagtgt atctaagttc aatttcgtat
     2461 tctctgaatg gacgccaacc caaagtatcc ccatattttg tttcaagtaa ttttcgttgt
     2521 ggtgggttgt taactgcacc gacaaagtat gcatgctgat cctctcttgt aaaatatcca
     2581 ttataatatg atagcctaaa accttggttg gcattaacag aatttgattt ttcctgttct
     2641 gatttccaat cgaacagata gaaattgtat gtattatctt cttctagtat tgtaggtttc
     2701 ttgtacccaa atacgattcc tataaaatcg ttgtcacgat cctctaccac agttacttta
     2761 cctcttatta atacattaat catttcattt gggcttacaa aaaagctggc aggaaaaatc
     2821 catgttgtat caatcgcttc tgttgaacta agtactttcc aatatgcatt tggtgtccct
     2881 tctttactcc attgagttaa atcaaaaaga gtttcacatt cctgactttg tgcctgtaaa
     2941 aatgttaaaa taaaggcaat tgaaataatt aggcttttcc ggggcattaa ttaattttta
     3001 attaaataga tttctattta agacgtataa tagtaatagt aggttgcata attattttgg
     3061 ttatatcttt tcttattctt tcacttttaa ctcctcggtt ggtttcccaa gaaacttaac
     3121 tatcagatat agtacaagaa taccaattgg gaacaatatc catgatgaaa ttccgtatga
     3181 agctggaag
//
LOCUS       DASCQP010000473         2508 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001733248, whole genome shotgun sequence.
ACCESSION   DASCQP010000473 DASCQP010000000
VERSION     DASCQP010000473.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2508)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2508)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2508
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001733248"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1822)
                     /locus_tag="QF480_08105"
     CDS             complement(<1..1822)
                     /locus_tag="QF480_08105"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013591.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HJN06564.1"
                     /translation="MKKITLLMLFIFFLMTACINNETKKEMTDNPFFSEWTTPHEVPP
                     FDLIKDEHFIPAFEKAIENQNKEIDAIVSNTEVPSFLNTIVALDKSGNDLRKVSGVFF
                     NLTEANTNDEITKITGEIAPKLANHNDNILLNANLFKKVKHVADAQKHINVEVEIGNA
                     QALNQEQKALLDEIYQGFVRGGSELNEEDQAKLRVINEKLASLYPEFDNILLKESNNF
                     YMLIEVEAELSGLPKSVKDAAAEVATSKGHKGAWAFTLDKPSWIPFLQYADNRNRRDE
                     LYTAWMNRGKTTEYNTTPLINEILVLREQKAKLLGFNNFAEYAVSKNMAKTPDRVYEL
                     LLGLWEPSLEKARAEAVELQALMNREGVNGELKSWDWWYYTEELRKEKYDLDENELRP
                     YFSLEAVKKGAFELSERLYGIKFIKRNDIPVYHEDVEAYELTEADGTHLGIFYLDYFP
                     RSSKRRGAWMEAYRKQSGSGNDEVTPIICNVGNFTKPTADAPSLLSVDEVLTLFHELG
                     HGLHGFLSSVEYQTISGTSVKRDFVELPSQIMENWALEPELLKLYAYHYKTGELIPQV
                     LVEKIQLSGKFNQGFVTTEYLAASLLDMNYHTAANASEINI"
     gene            complement(1915..>2508)
                     /locus_tag="QF480_08110"
     CDS             complement(1915..>2508)
                     /locus_tag="QF480_08110"
                     /EC_number="3.4.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF015536.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016805 - dipeptidase activity [Evidence
                     IEA];
                     GO_function: GO:0070004 - cysteine-type exopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C69 family dipeptidase"
                     /protein_id="HJN06565.1"
                     /translation="GFSFITQSRNWLPNGIGGIIWWGVDDASGTVYMPMYSSITKVPF
                     NYTVGNGSMMEWSNKSGFWIFNQVQNFAYTRYSYIHPEIEKVQNKFETDFIALTPAVD
                     AGAVALMSSDKEAAIAYLTSYSNSVGADVFNTWKNLYKYLFVKYMDGNIKTAREIPEG
                     YIYYAPKVSQPGYGDDKYRSIIQETGDQFKVAGGDGH"
BASE COUNT          753 a          509 c          416 g          830 t
ORIGIN      
        1 caatattaat ctcactagca tttgcagcag tgtgataatt catatcaagc aaacttgcag
       61 caagatattc agttgttaca aaaccctgat taaacttacc acttagttga attttttcaa
      121 ctaatacctg aggaatcaac tccccggttt tataatgata tgcgtaaagt ttaagtagtt
      181 ctggctcaag tgcccagttc tccatgatct gagagggaag ttcaacaaaa tcacgtttca
      241 cagaagttcc actgattgtc tgatattcaa cgctagaaag aaaaccatgg agaccatgac
      301 caagttcgtg gaatagggtt aacacttcat caacacttaa taatgaaggt gcatcagcag
      361 taggttttgt gaagtttcca acgttacata taatcggcgt tacttcatca ttcccagatc
      421 cagattgttt gcgataagct tccatccatg ccccacgtct tttcgaggac cttgggaaat
      481 agtcaaggta gaagattccg aggtgtgttc catctgcctc agtcaattca taagcttcaa
      541 catcttcgtg ataaaccgga atgtcgttgc gctttatgaa tttaattcca taaagacgtt
      601 ctgataactc gaaagcacct tttttaactg cttccaatga gaaatacgga cgaagttcat
      661 tttcatcaag atcatatttt tctttacgca actcttctgt ataataccac cagtcccagc
      721 ttttcagttc gccattaaca ccttctctgt tcattagagc ctgtaattca acagcttcag
      781 ctcttgcttt ttcgagagag ggctcccata atccaagaag taattcatac accctgtcag
      841 gagttttggc catattttta gaaacagcgt attcagcaaa gttgttaaag ccaagaagtt
      901 ttgccttttg ttcacgaaga actaatatct cattaattaa aggtgttgta ttatactcag
      961 ttgtttttcc tctgttcatc catgctgtgt aaagttcgtc tcgacgattg cgattatccg
     1021 catactgaag aaatggaatc cagctaggtt tatcaagtgt aaaagcccat gcacccttgt
     1081 gaccttttga agtggcaact tcagcagcag catctttaac ggattttggt aatcctgaaa
     1141 gttcagcttc aacctcaatt agcatataga aattattgct ttcttttagc aggatgttat
     1201 caaactcagg atacagagaa gcaagttttt cattaataac ccgaagcttt gcctgatctt
     1261 cctcgtttaa ctctgaacca ccccttacaa aaccctgata tatttcatca agcaatgctt
     1321 tttgttcctg attcaaagcc tgagcatttc caatttccac ctctacgttg atgtgttttt
     1381 gagcatcagc tacatgctta acctttttaa ataaatttgc attaagcaaa atattgtcat
     1441 tatggttggc aagtttggga gcaatttctc ccgttatctt ggttatttca tcatttgtgt
     1501 ttgcctcagt gaggttgaag aatactccac tcactttcct cagatcattt ccactcttgt
     1561 ccaaagcaac tattgtattt aaaaaagaag gaacttcagt atttgaaaca atagcatcaa
     1621 tttctttatt ttgattttca atggcctttt caaatgccgg aataaagtgc tcgtccttaa
     1681 ttaaatcaaa aggggggact tcatgcggcg ttgtccactc actaaaaaat gggttatcag
     1741 tcatttcttt tttggtttcg ttgtttatgc atgctgtcat taaaaagaag atgaagagca
     1801 ttaatagggt gatttttttc attgtgtttt aaattttttc aatattgcta tgaagtactt
     1861 gttacaagta aaacacacct aattaattta tgatttcaat ttaagattca ggaattaatg
     1921 tccatctcct ccagctactt tgaattgatc tcccgtttcc tgaattatcg aacggtactt
     1981 atcatctccg tatcctggtt gtgaaacttt aggggcataa taaatataac cttcgggaat
     2041 ttcacgagca gttttaatat taccatccat atattttaca aacaaatact tataaagatt
     2101 tttccaggta ttaaacacgt cagcgccaac ggaatttgaa taacttgtaa gatatgctat
     2161 agcagcttct ttatcagatg acattagagc aactgctccg gcatcaacag caggggttaa
     2221 tgcgataaaa tccgtttcaa atttattttg aactttttca atttcaggat gtatatagct
     2281 ataacgagta taagcaaagt tctgtacctg attaaaaatc caaaaacctg atttattcga
     2341 ccattccatc atcgatccat tgccaacagt ataattgaac ggcacttttg taatacttga
     2401 atacattggc atatatacag tacctgaggc gtcatcaaca ccccaccaaa ttataccacc
     2461 aattccattc ggcagccagt tacgtgattg agttataaaa gaaaaacc
//
LOCUS       DASCQP010000474         1678 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001738972, whole genome shotgun sequence.
ACCESSION   DASCQP010000474 DASCQP010000000
VERSION     DASCQP010000474.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1678)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1678)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1678
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001738972"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..628
                     /locus_tag="QF480_08115"
     CDS             <1..628
                     /locus_tag="QF480_08115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06566.1"
                     /translation="KSDEAKRVMVGKPVITVIGARNMWVMAQEDIKKMILDIGGHLAG
                     NIVLNDRHNNLISVVTIIYWMMTGKKERYLGLFPKPGISDTDIINVKRFSPVIAEALN
                     SDNFSGLQDRLLSLKAVELSPNIVSTEEKGKRIFRIWAGFILKKGGSGSTKRVRRLIM
                     FKWYLLFVIFVVSPIVSVFFYLTWPLFYVKIRKKIKYYSGVALKINKE"
     gene            625..>1678
                     /locus_tag="QF480_08120"
     CDS             625..>1678
                     /locus_tag="QF480_08120"
                     /inference="COORDINATES: protein motif:HMM:NF005293.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="StlD/DarB family beta-ketosynthase"
                     /protein_id="HJN06567.1"
                     /translation="MNSVFITKIEKFLPNDPISNDEMEKRLGLINGNVSKSRSLILRN
                     NGIKTRYYALDQQGSITHNNAELASLAINKLFNTEIKIDDIQLLTAGTSSPDAIHPAH
                     ALMVLGVLGGPSIETMSAHGTCNAGMLSLKYAYLSVLSGQVQNAVNVASETLSSWMLS
                     ENFQVEIDKRKEIEDNPYIAFEKDFLRWMLSDGAAAALVQDKPKRDGLSLKIEWIDVK
                     SFANELESCMYAGCVKNKDGNVTGWRELSIDEQNSQSVFSLKQDAKLLQKHVIEKGIE
                     HLKSIKRNRNFDESKIDHFLPHLSSMFFKKHAIEGFIEAGIDLPEHKWFMNLPKIGNV
                     GAASAMLMIEELFNSGN"
BASE COUNT          569 a          233 c          351 g          525 t
ORIGIN      
        1 taaatcggac gaagcaaaaa gagtaatggt aggtaaaccg gttattacgg ttattggtgc
       61 tagaaatatg tgggtaatgg cacaagagga tattaaaaaa atgatacttg atattggggg
      121 acatttagct ggtaatattg ttttgaatga cagacataac aatcttatta gtgtggttac
      181 aattatatat tggatgatga caggtaaaaa ggagaggtat ctgggattat ttcctaaacc
      241 tggcatttcg gatactgata ttatcaacgt aaagcgtttt tcccctgtta ttgctgaagc
      301 tctaaatagt gataatttca gtggactgca ggatagatta ttatcactta aagcagtaga
      361 actatctcca aatattgttt ctacagagga aaaaggaaag aggatcttcc gaatatgggc
      421 aggatttata ttaaaaaagg gtggctcagg atcaacaaaa agagttagaa gacttattat
      481 gtttaagtgg tatcttttgt ttgttatttt tgtggtttca ccgattgtgt cagttttctt
      541 ttatctcaca tggcctttat tttatgtaaa aatcagaaaa aaaataaaat actatagtgg
      601 ggtggcatta aaaattaaca aagaatgaat agtgttttta taactaagat tgagaaattt
      661 ttacctaatg atcctatttc taatgatgag atggagaaac gtcttggatt aataaatgga
      721 aatgtttcaa aaagcaggag tctgattttg agaaataatg gaatcaagac aagatattat
      781 gctcttgacc aacaaggtag cataacacat aataatgcag aacttgcctc acttgctatt
      841 aacaagttat tcaatacgga aattaaaatt gacgatattc agcttcttac tgcaggcacc
      901 tcttcacctg acgccataca tccggcacat gcattgatgg ttctcggtgt tctgggtggc
      961 cctagtatag aaacaatgtc tgctcatggt acttgtaacg ctggaatgtt atcacttaaa
     1021 tatgcatatt tatcggtact ttcaggtcag gttcaaaatg cagttaatgt tgcatcagaa
     1081 acattgtcat catggatgct ttcagaaaat tttcaggttg agattgataa aaggaaagaa
     1141 attgaagata acccatatat tgctttcgaa aaagattttc ttagatggat gctgtcggat
     1201 ggggcagctg cagcactggt tcaggacaaa cctaagcgtg atggtttatc cctaaagata
     1261 gagtggattg atgttaaatc gtttgctaac gaactagaat catgtatgta tgccggatgt
     1321 gttaaaaata aggatggtaa tgttactggt tggcgagaac tatcgataga tgaacagaac
     1381 tctcaatcgg ttttttcgct taaacaagat gcgaaattac ttcaaaaaca cgtgattgaa
     1441 aaagggattg agcacttaaa aagcattaag aggaacagaa attttgatga aagtaagatt
     1501 gaccattttc tcccacatct atcctcaatg ttttttaaga aacatgcaat tgaaggattt
     1561 attgaagcgg gaattgatct gcctgaacat aaatggttta tgaatttgcc aaaaattgga
     1621 aatgttggtg cagcttcagc tatgctaatg attgaagaat tatttaactc aggtaacc
//
LOCUS       DASCQP010000475         5383 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001743032, whole genome shotgun sequence.
ACCESSION   DASCQP010000475 DASCQP010000000
VERSION     DASCQP010000475.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 5383)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5383)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5383
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001743032"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..183)
                     /locus_tag="QF480_08125"
     CDS             complement(<1..183)
                     /locus_tag="QF480_08125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013546807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HJN06568.1"
                     /translation="MSIITINKSILRLAIPNIVTNITVPLLGLVDLALMGHLQDPVYI
                     GAIALGSIIFNVIYSGF"
     gene            complement(243..947)
                     /locus_tag="QF480_08130"
     CDS             complement(243..947)
                     /locus_tag="QF480_08130"
                     /EC_number="1.8.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006283815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004604 - phosphoadenylyl-sulfate
                     reductase (thioredoxin) activity [Evidence IEA];
                     GO_process: GO:0019379 - sulfate assimilation,
                     phosphoadenylyl sulfate reduction by
                     phosphoadenylyl-sulfate reductase (thioredoxin) [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoadenylyl-sulfate reductase"
                     /protein_id="HJN06569.1"
                     /translation="MDKAIIEKWNTELSNSSPDEVISFFYDKFPGKVVLSTSLGLEDQ
                     ALIEMVSSIDKKAPIFTLDTGRLFPETYDLLDRTSKKYGININIYFPNTNEVEDMVNN
                     KGINLFYESIDNRKLCCDLRKLAPLARAMRGYDAWITGLRKDQSVTRTDMKLVEWDEN
                     NNMLKINPLINWSEQDLMNYIEVKNIPYNALHKKGFASIGCQPCTRAIDPGEDVRAGR
                     WWWENPDTKECGLHSK"
     gene            complement(1046..1957)
                     /locus_tag="QF480_08135"
     CDS             complement(1046..1957)
                     /locus_tag="QF480_08135"
                     /EC_number="1.3.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005468621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004152 - dihydroorotate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase"
                     /protein_id="HJN06570.1"
                     /translation="MINLNVDIADLNLKNPVTTASGTFGFGEEFKDFIDLSKLGGIFV
                     KGLTILNREGNDYPRMAETASGMLNAVGLQNKGIDYFINTIYPTIKNFGTEIIPNING
                     SIAEDYIEIAEKLNDVAGINSLELNISCPNVKEGGMSFGVNSQAASTITSAVRKVFDS
                     TLIVKLTPNVTDIAEIAKSVEGAGADAVSLVNTFLGMAIDADTKKPLLSTITGGLSGP
                     AIKPIALRMVWQVYNAVKIPVVGIGGIMNANDAIEFMLAGATAIQVGTANFIDPEVSI
                     KIIEGMEEYCVKHGINNVSDLVGGLIT"
     gene            complement(1954..2715)
                     /locus_tag="QF480_08140"
     CDS             complement(1954..2715)
                     /locus_tag="QF480_08140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013611039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase electron transfer
                     subunit"
                     /protein_id="HJN06571.1"
                     /translation="MKRIQDFKVKDYEWLNADNFILALSSESNIEDIKPGNFAEIKIP
                     NSHDIFLRRPFSILDVDHKTKTIKFYVKAIGKGTHKLGTLSIGSILNIIYPLGNSFNI
                     LQQKNVLIIGGGSGIAPFILLASKLKKENNQITFLIGARSKEDVFLIDEFSKFGDVLI
                     TTEDGSLGEKGVVTQHSVFSNHFPFDHIYTCGPDPMMKAVATIAKEKNVSCEASLENM
                     MACGIGACLCCITSTVNGNKCVCTEGPVFNTKDLK"
     gene            complement(2717..3199)
                     /locus_tag="QF480_08145"
     CDS             complement(2717..3199)
                     /locus_tag="QF480_08145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004358536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5606 domain-containing protein"
                     /protein_id="HJN06572.1"
                     /translation="MDLSKILSIAGKPGLYLMVGEAKNNLIVESLIDGKKIPSFAHDR
                     VSTLKEISIYTENEDVALEKVLKSISDLKEGKPIESPKKLSNDALKSTFAEVLPDYDR
                     DTVYVSDIKKIFSWYNLLLEKDMLDFTDEDEEIDEAKDMESEDVIKEDKPKEKAEDNS
                     "
     gene            3393..4280
                     /locus_tag="QF480_08150"
     CDS             3393..4280
                     /locus_tag="QF480_08150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06573.1"
                     /translation="MKYIVLTLSIGLVISLGGCGTGKQLAQQTHIADSYYKAGNYIEA
                     LSLYSEIIDQYENNNNLTGCPVYTRAGESALKDNHPKLAINYLKKARNTSYTNASTYF
                     LLAEGYKQIDNLSLEINTLSDYLKLYPDGKDAAIVKKRLFYTYVESENFDKALELWPE
                     IYANNQSDTELLEGYFIANKGLDNTDKCNDIAEKLLGLDKDNITALVWFAKQYYNKAE
                     DRYQIEIKAYDKKKTKKQYNILIKALEIVTVDFKKSLSYFKKIYTLQPTSKNAQYLSH
                     IYGRLSDKKKAAYYKKISK"
     gene            complement(4330..4782)
                     /locus_tag="QF480_08155"
     CDS             complement(4330..4782)
                     /locus_tag="QF480_08155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06574.1"
                     /translation="MKLKHKVAVWIMRYLLADILSTILSLATAWLIMDTTGDRVLAAF
                     VGSAVASISFYGIVAFSDVRKSLKQHRTDNELYKIKSFLLDFRNLIIEFGPAELLDVL
                     AVRPFFMYLIPKLTGDFLLGTFIGKMIADVIFFIPAIVMYELRKKHLD"
     gene            complement(4797..>5383)
                     /locus_tag="QF480_08160"
     CDS             complement(4797..>5383)
                     /locus_tag="QF480_08160"
                     /inference="COORDINATES: protein motif:HMM:NF012544.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06575.1"
                     /translation="IITSEVPSTAALHGVLPKALGRYNKNESPFVALTVTSIIMQITL
                     LFSAFEKNAFLAIISIAGSMILIPYVLSAMFLFKQARSKDGAKHLSGTLKTQAIITGA
                     MATMYGFWLVYAAGLKYILLSSILYAIGILVYKKAWKENKSNEPLFKPYEKIIAVIIV
                     ILAVGSLGMMLSGFLRVDNWVHWFKHHVLDTTQL"
BASE COUNT         1754 a         1027 c          833 g         1769 t
ORIGIN      
        1 aaaaccagaa taaatcacat tgaaaataat gctacctagt gcaattgccc caatataaac
       61 aggatcctga aggtgtccca ttaaagccag atcgacaagc ccaagcaatg gtactgtgat
      121 attggttaca atattgggaa ttgcaagcct tagaatactc ttattgatag taataattga
      181 catggatggc aatgttgata tgaatgcgct tgttgacttt tttgtatacc ctatctgtaa
      241 ctttatttac tatgaagtcc gcattctttt gtatctggat tttcccacca ccatcttcca
      301 gcacgtacat cttctccagg atcgattgca cgagtacatg gttgacaacc gatgctggca
      361 aatccttttt tgtgcagggc attatatggg atatttttga cttcaatata attcattaga
      421 tcttgctccg accaatttat cagaggatta atttttagca tattgttgtt ttcatcccat
      481 tcaaccaatt tcatgtctgt tcttgttacc gactgatctt ttcgcagccc tgttatccaa
      541 gcatcatatc cccgcatagc tcttgcgaga ggtgctaatt tacgtagatc acaacatagc
      601 tttctattat caatactttc gtaaaaaaga ttgatgcctt tgttgtttac catatcttca
      661 acctcatttg tattaggaaa ataaatatta atatttatac catatttttt ggacgtacgg
      721 tctaacaaat cataggtttc agggaataat cttccagtat caagggtaaa aatgggcgct
      781 tttttgtcaa ttgaagatac catctctatg agggcctggt cctctagtcc aaggcttgtt
      841 gacaaaacaa ctttaccagg aaatttatca taaaagaatg agataacttc atcgggtgat
      901 gaattactta attcggtatt ccatttttca attattgctt tgtccattac catcattatt
      961 tagtgtgcaa atatattgaa agttgtaaag gaaagataag taagtaaaat atgactggaa
     1021 cggtttcaca aaaaacaaag aagtattatg ttatcaaacc tccgacaaga tcagacacat
     1081 tgttaatacc atgtttaaca caatattcct ccataccttc aataatttta atactaacct
     1141 ccggatcgat aaagttggca gttccaacct gtatcgcggt agcaccagcg agcataaatt
     1201 caattgcatc attagcattc attatccctc ctattccaac aacaggtatt tttacagcat
     1261 tgtaaacctg ccaaaccatt cgaagagcaa taggtttaat agctggacct gaaagtccac
     1321 ctgtaatagt tgagagcaga ggtttctttg tatcagcatc tattgccata ccaagaaatg
     1381 tattaaccag cgaaactgca tcagcgccag caccctcaac actttttgct atttctgcaa
     1441 tgtcagttac gttaggtgtg agttttacga ttaatgtact atcgaaaact ttacgtacgg
     1501 cacttgtaat tgtactggct gcctgactat taaccccaaa ggacattcca ccctctttta
     1561 cattagggca agagatattc agttccagag aattaatacc agctacatca ttaagctttt
     1621 cagcgatttc gatataatct tccgctattg aaccgtttat atttggaatt atttctgttc
     1681 caaaattctt aattgtggga taaattgtat ttatgaaata atcaattcct ttgttttgta
     1741 gccccactgc attcagcatc cccgaagctg tttctgccat tctgggataa tcatttccct
     1801 ctctgtttaa gatggtaagt cctttcacga aaataccacc caatttactt agatcaatga
     1861 aatccttaaa ctcttcgcca aaaccaaatg ttccagaagc ggtagttacc ggattcttta
     1921 agttcagatc agctatatcc acgtttaggt ttatcatttc agatcttttg tattaaaaac
     1981 aggtccttct gtgcagacac atttatttcc gttaacggta gaagttatac agcataaaca
     2041 agcaccaata ccacatgcca tcatattttc aagtgatgct tcacaactta catttttctc
     2101 tttagcaatt gttgcaacag ctttcatcat aggatctggt ccacaagtat aaatatgatc
     2161 gaaaggaaaa tggttggaaa aaacagaatg ttgtgttact accccctttt ctcccaagct
     2221 tccatcttcg gtagttatta gtacatctcc aaacttacta aactcatcaa ttaaaaacac
     2281 atcctctttt gaacgcgctc caatcaagaa agtaatctga ttattctctt tctttagctt
     2341 ggacgcaagc aaaatgaagg gagctattcc agatcctcca ccaatgatca aaacattttt
     2401 ttgttgaaga atattgaatg agtttcctag cgggtaaata atatttaaga ttgaaccaat
     2461 tgagagagta ccaagtttgt gggttccttt accaattgct tttacataaa atttgatggt
     2521 ttttgttttg tgatcgacat ccagaattga aaacggtctt cgtaaaaata tatcgtgtga
     2581 gttgggaatt ttaatttcag caaagttgcc tggtttaata tcttcgatat tcgattcaga
     2641 acttagtgca agtatgaaat tatcagcatt tagccactca taatctttaa ctttaaaatc
     2701 ctgaattctt ttcatattag ctattgtcct cggctttttc ttttggttta tcttccttaa
     2761 ttacatcttc cgactccata tctttagctt catcaatctc ctcatcctca tcagtaaaat
     2821 ccagcatatc tttctccaaa agcaggttgt accatgaaaa aatctttttt atgtcagaca
     2881 catacactgt atcacgatca taatcaggaa ggacttcagc aaaagttgac ttcagagcat
     2941 cattagataa tttttttgga ctttcaatag gtttaccttc ttttagatcg ctaatactct
     3001 tcaaaacttt ttccagtgca acatcttcat tttcagtata tatacttatt tccttaaggg
     3061 tgctaactct gtcgtgggca aatgatggga tcttttttcc atcaattagc gattcaacta
     3121 tgagattatt cttcgcttct ccaaccatga ggtataatcc tggcttacca gctattgata
     3181 atattttact taaatccata aacaactaat atttgtgcaa aaataatatt aatactaaca
     3241 gaattcttaa caatccatac ttcatttaaa acactccata tttcatgtta tcctaatgac
     3301 ttctcggctc gtgtataggt tgcatttgtt tttaatcaga ttaacaaaca cctttgtata
     3361 aaatgctatt tttgcccatc taaaaaaaac agatgaaata tatagtactt accctatcaa
     3421 ttgggcttgt tatatcactt ggaggatgcg gaacaggaaa gcaactggcg caacagactc
     3481 atatcgctga ctcatattat aaagctggca attatatcga agctttgtca ttgtatagtg
     3541 aaattattga ccaatatgaa aataataata atttaaccgg atgccctgtt tatacaaggg
     3601 caggtgaatc cgctcttaaa gataaccatc cgaaacttgc tataaattat cttaaaaaag
     3661 caagaaatac ttcctatacc aacgcttcta catatttcct tttagccgaa ggatataaac
     3721 agatcgataa tttatcgttg gaaattaata ctttgtctga ttatctaaaa ctgtatcctg
     3781 atggaaaaga tgcagcaatt gtaaagaaac gcctgtttta tacttacgtc gaaagtgaaa
     3841 attttgataa agcacttgaa ctatggcctg aaatttatgc taataatcaa tctgatactg
     3901 aattacttga aggttacttt atagcgaata agggattaga caatactgac aaatgcaatg
     3961 atatagctga aaaactatta ggattagaca aagataatat tacagctctg gtttggtttg
     4021 caaaacagta ttataataaa gccgaggatc gttaccaaat tgaaataaaa gcctacgata
     4081 aaaagaaaac aaagaaacaa tacaatattc tgattaaagc gttagagatt gtaactgttg
     4141 attttaagaa atcgctttca tatttcaaga aaatttacac gttacagcca acatctaaga
     4201 atgctcaata tctgagtcat atttacggaa ggctaagtga taaaaagaaa gctgcttact
     4261 acaaaaagat ctcaaaatag attagttaga tcaaattttg tgagagtttg aaaatagttt
     4321 ctatctaacc taatctaaat gcttttttct taactcatac attactatag caggaatgaa
     4381 gaagattaca tctgctatca tttttccaat aaaagtaccc aatagaaaat cacctgtcag
     4441 ttttggtatt agatacataa agaatggtcg cactgccaac acatccaata attctgccgg
     4501 accaaactca ataattagat ttctaaaatc caataaaaat gattttatct tatacagttc
     4561 attatctgtt ctatgttgtt ttaagctttt tcgaacatca gaaaatgcca ctattccgta
     4621 aaagcttatc gaggcaactg cagatcctac aaaggcagct agtacacggt caccggtagt
     4681 atccattatt aaccaagcag tggctaaaga taatattgtg cttagaatat cagccaatag
     4741 ataccgcata atccaaacag ccaccttgtg ttttaacttc atattaatac ttctcgctat
     4801 agttgagttg tgtccaatac atgatgctta aaccagtgta cccaattatc gacacgtaaa
     4861 aaacccgata acatcattcc taatgatcca acagcaagta taactattat aactgcaata
     4921 atcttttcgt aaggtttaaa taatggttcg ttagatttat tttctttcca tgccttttta
     4981 tacactagta tacctattgc atacaagata cttgatagta gtatatattt caaaccagcc
     5041 gcataaacaa gccaaaagcc gtacatagta gccattgcac ctgttataat tgcctgggtt
     5101 tttaaagtgc cggacaaatg ttttgcacca tctttacttc ttgcttgctt aaataagaac
     5161 attgcactta gaacatatgg gataaggatc atggagcccg caatacttat aatagccaga
     5221 aaagcatttt tttcaaaagc agaaaaaagt aatgttatct gcattataat gcttgtaaca
     5281 gttaatgcca caaaaggtga ttcattctta ttatatcttc ctaacgcttt aggaaggaca
     5341 ccatgtaaag ctgcggtgga aggaacttca cttgtaatga tgg
//
LOCUS       DASCQP010000476         3889 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001744595, whole genome shotgun sequence.
ACCESSION   DASCQP010000476 DASCQP010000000
VERSION     DASCQP010000476.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3889)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3889)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3889
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001744595"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1688)
                     /locus_tag="QF480_08165"
     CDS             complement(<1..1688)
                     /locus_tag="QF480_08165"
                     /inference="COORDINATES: protein motif:HMM:NF012602.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HJN06576.1"
                     /translation="MSWIEDLISPKTRKWEEFYHNRFQHDKTVRSTHGVNCTGGCSWN
                     IHVKDGIVVWETQALDYPLLEKSLPPYEPRGCQRGISYSWYLYSPIRVKYPLIRGALV
                     DLFREEKRKTGDPVIAWQNIQSNPKKRKRYQNARGKGGFRRIKWDEALEIIGAANIST
                     VKKYGPDRIIGFSPIPAMSMISYAAGSRFLQLMGGVNLSFYDWYCDLPNSYPEVWGEQ
                     TDVCESADWYNSKFIAVMGANLGMTRTPDVHFFCESRHNGTKTVVLSPDFSMVSKYAD
                     QWIPLHAGQDGAFWMAVTHVILKEFHYDKKIEYFIDYVKKYTDCPFLVELVKDKDGYV
                     AGKMLRANKVKQYEKIENGDWKFLNIDEKSGELVCPGGSSGHRWDGKDGNWNMKYEDA
                     ENGKKYEPVLSLIDKNDEICQVTFDDFSKTKKSQRGVPVKHIDTLNGKVTVATIYDVL
                     MAQYGIDRGLGGDYPTSYNDNEQTYTPAWQELYTGISKETVIQFAREWSVTAEKTNGK
                     CMIIIGAGINHWFHNNLIYRAGTMALIFTGCVGKNGGGINHYVGQEKLDPKDSWG"
     gene            complement(1729..2388)
                     /locus_tag="QF480_08170"
     CDS             complement(1729..2388)
                     /locus_tag="QF480_08170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06577.1"
                     /translation="MKLFTGLLLSLLLTYGFSFSGKSQVNINDSIILDSAIVLLDSAS
                     AANASNFNEIKKKVDEIIEFKNEDEFNQMAIEGIALFNGDSRLENGGPSCISCHVLNA
                     EGVALGGFLGLDLSNSYTTVNKEKGLQMILKTPTSPIMKLSFADSPITKEEMKRLIAL
                     LKKSDMNKEYQLARINEVFLLKYGICGVIVVMVILLFVWRNRKKKSVKHDIYSRQLKT
                     I"
     gene            complement(2427..3035)
                     /locus_tag="QF480_08175"
     CDS             complement(2427..3035)
                     /locus_tag="QF480_08175"
                     /inference="COORDINATES: protein motif:HMM:NF012264.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HJN06578.1"
                     /translation="MSINYNIQGKLRSFSNANMALKIILIALLLNFLSCSRNKEDRGY
                     QYGGDMAKSTAYETYSSSKVYKDGKSALQPVTGTIPREMVPYTFENNNEGLKEAGLEL
                     KNPLEATTENIEQGKELFTIYCMNCHGENGDGNGFLFTSKKFPIKPASLIDEKTINRP
                     DGEIFHVITVGGAAMGSHASQIKPVDRWKIILYIRTGFDKNI"
     gene            complement(3061..>3889)
                     /locus_tag="QF480_08180"
     CDS             complement(3061..>3889)
                     /locus_tag="QF480_08180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06579.1"
                     /translation="LDAILEGKTEYLNVPFFIIRLVVYYFLWSFLAYLLRKQSNQLDL
                     DPNPKILKRSTATSGIFMVIFAITVSTSSWDWLMSLDAHWFSTMFGWYVFAGMFNIAL
                     AGIILLLLYLKKNGYLQEANDNHLHDLGKYLFGFSIMWMYLWFSQYMLIWYSNIPEET
                     VYFVTRFNHFPILLYVNLVLCFVLPFLLLMSRDAKRNPKYMAITAIIVLIGHWVDFYL
                     IIMPGAVGDNATIGLIEIGTFIAFAGIFILIVLKYLGKIPLTSRNHPFLKESLTYDT"
BASE COUNT         1206 a          786 c          563 g         1334 t
ORIGIN      
        1 ccccaggaat ccttagggtc aagtttttcc tgacctacat aatgattaat acctccaccg
       61 ttttttccaa cacagccagt aaaaatcaaa gccatagttc cagctctata aattaaatta
      121 ttatggaacc aatggttaat accggcacct atgatgatca tacatttgcc atttgttttt
      181 tcggctgtta ctgaccattc acgtgcaaac tgaattactg tttctttact aatacccgta
      241 tatagttctt gccatgctgg tgtatacgtt tgttcattgt cattgtatga tgtaggataa
      301 tctcctccaa gtcctctatc aataccgtat tgagccatta acacatcata aatagtagct
      361 actgtcactt ttccattcag tgtatcaata tgttttacag gtacgcctct ttgtgatttt
      421 ttcgttttac taaaatcatc gaacgttact tgacatattt catcgttttt gtcaattaat
      481 gataatacag gttcatattt ttttccgttt tcggcatctt catatttcat gttccagtta
      541 ccatccttac catcccagcg atgtcctgag cttcctcccg gacaaaccaa ttctcctgat
      601 ttttcatcaa tatttaaaaa tttccaatcg ccattttcta ttttttcata ttgttttact
      661 ttattggcac gtagcatttt tccagcgaca taaccatcct tatcctttac aagttcgacc
      721 aagaatggac aatcagtata tttttttaca taatcaataa aatactcaat ttttttatcg
      781 taatgaaatt ctttgaggat cacatgagtt acagccatcc agaacgcacc gtcttgtcct
      841 gcgtgtaatg gaatccactg atctgcatat tttgatacca tgctgaagtc aggtgataaa
      901 acaactgttt tggtcccgtt atgcctcgac tcacagaaaa aatgaacatc cggagtacgt
      961 gtcatgccaa ggttggcacc cattacagca ataaattttg aattgtacca gtcggcgctt
     1021 tcacatacgt cagtttgctc tccccatact tcaggataag aattaggaag atcgcaatac
     1081 caatcataaa aacttaaatt aactccaccc atcaactgca aaaatctaga accagcagca
     1141 tagctgatca ttgacatagc tggaataggt gaaaaaccaa tgatgcgatc aggcccgtat
     1201 tttttaacag ttgagatatt tgcagcacca attatttcca gagcttcatc ccactttata
     1261 cgtcgaaaac ctccctttcc tcttgcattt tgatatctct tccttttttt aggattactt
     1321 tgaatattct gccatgctat aactggatcg cccgtttttc ttttttcttc cctaaataaa
     1381 tcaactagtg cgcctcttat taaaggatat tttactctta taggactata taaataccag
     1441 gagtaagaaa ttcctctttg acaacctctt ggttcatagg gaggtagaga tttctctaat
     1501 aaagggtaat ccaatgcctg tgtttcccaa acaactattc catctttaac atgaatattc
     1561 cagctacacc ctccagtgca attaacacca tgagtacttc taacagtttt atcatgttgg
     1621 aatctattat ggtaaaactc ttcccatttt ctggtctttg gtgatattaa atcttcaatc
     1681 caactcatat tatatatact taatattgat tttgctaaaa ttgatgcttt atatagtttt
     1741 tagttgccta ctataaatat catgctttac acttttcttt ttacgatttc tccatacaaa
     1801 cagcagtata accataacta cgattactcc acagatgcca tattttaaaa ggaatacctc
     1861 atttatccta gctaattggt actctttgtt catatcactt tttttcaata atgcaatcag
     1921 tcttttcatt tcctccttag ttatgggact atctgcaaat gaaagtttca taataggaga
     1981 tgttggggtt ttaagaatca tctgcaaacc cttttctttg tttactgttg tgtaggaatt
     2041 tgagagatca agaccaagaa agccccctag tgccacacct tctgcattta gcacatggca
     2101 ggaaatacat gaaggaccac cgttttccaa tctactatct ccattaaata aagcgatacc
     2161 ttctattgcc atttggttaa actcatcttc gttcttaaat tcaataattt catctacttt
     2221 cttcttgatt tcattaaagt ttgatgcatt agcagcacta gcggaatcga gtagtacgat
     2281 cgctgaatca agaattatac tgtcgtttat gttaacctga gattttccag aaaacgagaa
     2341 accatatgtt agtaataaac ttagcaataa acctgtgaat agtttcatta ttcttattgt
     2401 attaattaac atgcattgaa taattatcaa atatttttat caaatccagt tctgatatac
     2461 aaaattatct tccacctgtc aacgggttta atctgggaag catgagaacc catggcagcc
     2521 ccaccaaccg taataacatg aaaaatctca ccatcaggtc tatttattgt tttttcatca
     2581 attaaagaag ctggttttat aggaaacttt ttactggtaa atagaaaccc gtttccatct
     2641 ccattttcac catggcaatt catacaataa atagtgaata attctttgcc ctgttcaata
     2701 ttttctgtgg ttgcttcaag tggatttttt aattctaaac ctgcttcttt tagaccctca
     2761 ttgttgtttt caaatgtata tgggaccatt tctcttggta tagtacctgt tacaggttgt
     2821 aacgcagatt taccatcttt ataaactttg ctacttgagt atgtttcgta ggcagttgat
     2881 tttgccatat cacctccata ctggtaacct ctatcttctt tattcctgga acaactcaga
     2941 aaatttaata ataaagcaat taagataatt ttcaaagcca tatttgcatt tgaaaatgac
     3001 cttagtttac cttgtatatt gtagttaatg ctcataattt catattacat ttatcagttc
     3061 tcaggtatca taagttaaac tttctttaag gaaaggatga tttcttgacg tcaaaggtat
     3121 tttccccaaa tatttcagta cgattagtat aaagatgccg gcaaaagcaa taaatgttcc
     3181 tatttcaatc aatccaatag ttgcgttatc tccaactgcg ccgggcataa taattaagta
     3241 aaaatcaacc caatggccaa tcaatactat gatagcagta atggccatat acttagggtt
     3301 tctttttgca tctcttgaca tcaacaagag aaaaggtaat acaaagcata ataccaggtt
     3361 tacgtacaat aatattggaa agtgattaaa acgggtgaca aaatagacag tttcctcagg
     3421 tatatttgaa taccagatta acatatattg tgaaaaccat aaatacatcc acattatgct
     3481 aaaaccaaat aagtattttc caaggtcatg caaatggttg tcattagctt cttgtagata
     3541 gccgttcttt tttaggtata ataaaagcaa aattattcct gccaatgcaa tattaaacat
     3601 gcctgcaaac acataccaac cgaacattgt actgaaccaa tgagcatcaa gagacataag
     3661 ccaatcccaa ctggatgtag aaactgttat ggcaaatatc accatgaaaa ttccagaagt
     3721 cgctgtgctt ctcttaagta tttttggatt cggatcaagg tctagctgat tagactgctt
     3781 tcgtaatagg taagccaaaa aagaccacag aaaataataa acaaccaacc ttataatgaa
     3841 aaatgggaca ttcagatatt ccgtttttcc ttctaaaatc gcatcaaga
//
LOCUS       DASCQP010000477         2133 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001746932, whole genome shotgun sequence.
ACCESSION   DASCQP010000477 DASCQP010000000
VERSION     DASCQP010000477.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2133)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2133)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2133
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001746932"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            56..553
                     /locus_tag="QF480_08185"
     CDS             56..553
                     /locus_tag="QF480_08185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006799646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HJN06580.1"
                     /translation="MRFKLRPWKSSDIEDLVGFANNPKIAANLTNQFPHPYYRKDAED
                     FIKKVLLHDPMQVFAIEVDGKAAGAIGVFPQTDIHIKNLELGYWLAEIYWGKGITTEA
                     VQQVVEYGFKTFDVDRIFSRPFGTNLSSQKVLEKAGFKLEGKFEKAVYKNGKYLDELV
                     YAIRK"
     gene            complement(574..861)
                     /locus_tag="QF480_08190"
     CDS             complement(574..861)
                     /locus_tag="QF480_08190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06581.1"
                     /translation="MGKNNNKKEILKLIEEITTKIQKASNNISLLHTRAQLYTKIQEH
                     GKAINDYITILKSDPTDKEAQVKLDMLKTIVKYTNTDIYSSTNTNMDPWMD"
     gene            complement(863..>2133)
                     /locus_tag="QF480_08195"
     CDS             complement(863..>2133)
                     /locus_tag="QF480_08195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06582.1"
                     /translation="KIDAITLLLADAVKQKQIDDKYNELILIAIQQVKNEKLAEARMS
                     FVNAAELKPYEKMPQLQIRQIDSLIIVKANAAAIKQKFDQYISKGDSLKNQKEYALAI
                     VEYDQALTIFPDDISARQKKKTVESIQINLQKEAERKKAYEDAITKGDELFEVGSFEL
                     ARVEFEKAQNLRKDQEYPRNRLLNIASALERLAAENEKRYTDALVAADNFFEQQHYED
                     AVIKYQLANSIKPAERYPKQKIEICNSHIARRLKLIVAEYSVAISDADKLYASKIYDK
                     AIVAFKKAEKIKPDETYPSEMINKINKFIEENSIVDVINVADTIFSGVTEKFDFIPIK
                     INVRKSNYIFIKAKNLVDKPTKLIFSYGSDTGKNGGFVMQIIEGDVFNDYIVRVGNQY
                     KWFSEDNNWLSIIPENGNVEISMLRISKGY"
BASE COUNT          628 a          358 c          354 g          793 t
ORIGIN      
        1 taccaatcct ttaattattt gaatagaaat gtgagcgact tttacttatt aacaaatgag
       61 atttaaactt agaccctgga aatcatctga tattgaagat ttagttggtt tcgcgaataa
      121 tcctaaaatt gcagcaaacc tgactaacca attccctcat ccatactatc gtaaagatgc
      181 tgaagatttt attaaaaagg tcttgttaca tgatcctatg caggtttttg ctatcgaagt
      241 agatgggaaa gcagctggcg caataggagt ttttccacaa actgatatac atattaagaa
      301 cttggaacta ggatattggt tagcagaaat atattgggga aaaggaataa caactgaagc
      361 tgtgcaacag gtggttgaat atggatttaa gacatttgac gttgacagaa tattttcaag
      421 gccctttgga acaaacttga gctctcagaa agtattagaa aaggccggat tcaaattaga
      481 aggaaagttt gaaaaggctg tatataaaaa tggcaaatac ttagacgaat tggtttatgc
      541 tattaggaaa taatgagagg tgattaaatc ttctcaatcc atccaaggat ccatgttagt
      601 atttgtactg gaatagatgt ccgtgtttgt atacttaaca atggttttaa gcatatctaa
      661 ttttacttgt gcttctttat ctgtaggatc tgattttagt attgtgatat agtcgtttat
      721 tgctttgccg tgttcctgaa ttttggtgta tagttgagct cttgtatgta ataaacttat
      781 gttgtttgaa gccttctgaa ttttagtagt aatttcctca attagtttta ggatttcctt
      841 tttattatta tttttcccca tgctaatatc cttttgaaat ccttagcata gatatttcaa
      901 cattcccatt ctcaggaatt atagacaacc agttattatc ttcggagaac catttgtatt
      961 ggttacccac tcttacaata tagtcgttaa aaacgtcacc ttcaataatc tgcataacaa
     1021 aacctccatt ctttcctgta tcacttccat agctaaaaat tagtttagtt ggtttatcga
     1081 ccaggttttt agccttaata aaaatatagt tactttttct tacatttatc ttaattggta
     1141 taaaatcaaa tttttcagtt actccggaaa atattgtgtc agcaacatta ataacatcaa
     1201 caattgaatt ttcttcgata aacttattga ttttattaat catttcagag gggtatgttt
     1261 catcaggctt tattttttca gcctttttga aagcaacaat tgctttatcg tatattttgg
     1321 atgcatataa tttgtcagca tctgaaattg caacagagta ttccgcaact attaatttta
     1381 atcttctggc aatatggctg ttacaaattt ctattttttg tttgggatat ctctcagctg
     1441 gtttaatact attagccagc tgatacttaa taacagcatc ttcataatgt tgctgttcga
     1501 agaaattgtc ggcggcaact aaagcatccg tatatcgttt ttcattttct gctgccaacc
     1561 tttcaagagc gctagctata tttaggagtc gattacgagg atattcctga tcttttctga
     1621 gattctgagc tttctcaaat tcaactctgg cgagttcaaa gctgcctact tcgaataact
     1681 catctccttt tgttatagca tcctcatacg cttttttacg ctcagcttct ttttgcagat
     1741 ttatttgaat agattcaaca gtcttttttt tctgtcgtgc tgatatatca tcaggaaaaa
     1801 tagtgagcgc ctgatcatat tcaacaatag ccagagcata ttctttttgg tttttcaaag
     1861 agtctccttt gctaatatat tgatcaaact tttgtttaat cgcagcagca tttgctttta
     1921 caataatcag actatcgatt tgccgtattt gcaactgagg catcttttcg taaggcttaa
     1981 gttcggcagc atttacgaat gacatacgtg cttctgcaag tttttcattc tttacttgct
     2041 gaattgcgat caggataagt tcattatatt tatcatcaat ttgcttttgt tttacagcat
     2101 cggccaacaa taatgtaatg gcatcaattt ttg
//
LOCUS       DASCQP010000478         1726 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001748253, whole genome shotgun sequence.
ACCESSION   DASCQP010000478 DASCQP010000000
VERSION     DASCQP010000478.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1726)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1726)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1726
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001748253"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..215
                     /locus_tag="QF480_08200"
     CDS             <1..215
                     /locus_tag="QF480_08200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="anaphase-promoting protein"
                     /protein_id="HJN06583.1"
                     /translation="AYYLEAANLDDNGFTSPLFLYKAGQVYELLEDYDRAISIYTRIK
                     TNYYKSNEGRSIEKNIARVQALQERQ"
     gene            279..1253
                     /gene="fmt"
                     /locus_tag="QF480_08205"
     CDS             279..1253
                     /gene="fmt"
                     /locus_tag="QF480_08205"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006743499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004479 - methionyl-tRNA formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HJN06584.1"
                     /translation="MKKQDLRIVFMGTPDFAVSSLKALIDNEYNVVGVVTAPDKQAGR
                     GRKIKMSAVKQFALDNELSILQPPKLRDQSFIDELNNLRCNLQIVVAFRMLPEVVWSL
                     PSLGTFNLHASLLPQYRGAAPINHAIINGEKITGLTTFFLNNEIDTGKIICQKKVEIS
                     NEDSVGTLHDKMMVKGAELVLKTVECILDNKVKLQSQSTLKGVSESLKSAPKLHKEDC
                     RINWENSPITIYNFVRGLSPYPASFTVLSTKKGVQLSVKIFKVSVDTTSVQNSMPGSI
                     ITDGKKYLDVITGSGVVSILELQLSGKTRMGISDFLRGFSDIDNYHFE"
     gene            1563..>1726
                     /locus_tag="QF480_08210"
     CDS             1563..>1726
                     /locus_tag="QF480_08210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010535670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0030527 - structural constituent of
                     chromatin [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HJN06585.1"
                     /translation="MNKAELIDAMASGAGLSKSDAKKALEAFIGATGDSLKAGNRVAL
                     VGFGSFSVST"
BASE COUNT          592 a          274 c          306 g          554 t
ORIGIN      
        1 cagcatatta tctagaagct gctaacttgg atgataatgg tttcacgtcc cctctattcc
       61 tctataaagc tggacaagta tatgaattac ttgaagacta cgacagggct attagcatat
      121 ataccagaat taagactaat tactataaga gcaatgaagg acgtagcatc gaaaaaaata
      181 ttgcacgcgt acaagcactt caagaacggc aataaattag tatgaacaaa gattttaaac
      241 ctggtaattt acttgccagg tttttttatt tttatagaat gaaaaaacag gatcttcgaa
      301 tagtatttat gggaacaccc gatttcgcag tttcttcttt aaaggctttg attgataatg
      361 aatacaatgt cgttggtgtt gtaactgctc ctgataaaca agctggtaga ggaaggaaaa
      421 ttaaaatgtc ggcagtaaaa cagtttgctc ttgataacga gctaagtata ttacaacctc
      481 ctaaactaag agatcaaagt tttattgatg aacttaataa tcttcgttgt aaccttcaga
      541 ttgttgttgc ctttagaatg ttacctgaag ttgtatggtc tctgccttcc ttagggactt
      601 ttaatcttca cgcttcatta ttgccacaat acaggggtgc agcacctata aatcatgcca
      661 ttattaacgg agaaaagatt acaggactta caactttctt tcttaataat gagattgata
      721 ccggtaaaat catttgtcaa aagaaggttg aaattagtaa tgaagattct gtaggtactc
      781 ttcacgataa aatgatggtt aaaggcgcag aattagtact taaaacagtt gaatgtatac
      841 tggataataa agttaagcta caaagtcaga gtacattaaa aggagtaagt gaatctttaa
      901 aatcagctcc caaattacat aaagaagatt gtcgtataaa ttgggaaaat agccctatca
      961 caatatataa ctttgtacga ggattaagtc cgtatccagc ctcattcaca gtactgtcaa
     1021 caaaaaaagg agttcaactc tctgtaaaaa tattcaaagt ttctgttgat actacttcag
     1081 tacaaaatag tatgccaggg agtattatta cagatgggaa aaaatatctc gatgttataa
     1141 caggatcagg agttgttagt atattggaat tacagctttc aggcaaaact cgaatgggta
     1201 tatcagattt cttaagaggc ttctctgata ttgacaatta tcattttgag taaaataatt
     1261 gtagtttaag ttctaacctg aatttcaata ctcaaaaaaa ttacatttcc tgctaaaaag
     1321 atcatatatt atatgtatgc ataaatgttg tcacaactat caaaccttag ttatatgggc
     1381 acttcagcct aattacatgg tgcgatttgc cataaattga gctattttct ttggttttta
     1441 ttaacaatta ggctgtttta ttaacaatag tgatgtattt cgcccgtatt ccttgctttt
     1501 tcaactataa gcattacatt tgttcaaagt acagccttaa ttattaatta aattcttaaa
     1561 caatgaacaa agcggaatta attgacgcaa tggcatcagg agctggactc agcaaaagtg
     1621 atgctaaaaa agcactagaa gcttttatcg gtgctactgg tgattcttta aaagccggca
     1681 accgtgttgc attagttgga tttggatctt tctcagtttc gacaag
//
LOCUS       DASCQP010000479         3351 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001748938, whole genome shotgun sequence.
ACCESSION   DASCQP010000479 DASCQP010000000
VERSION     DASCQP010000479.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3351)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3351)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3351
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001748938"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..558
                     /locus_tag="QF480_08215"
     CDS             <1..558
                     /locus_tag="QF480_08215"
                     /inference="COORDINATES: protein motif:HMM:NF012885.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06586.1"
                     /translation="GTVSTIWGCPIEGPTELSAAVDFTQRWFDIGANDVEHADHDGSA
                     SPDRVFSYFSMLLDKVSNPHKQIVHFHTTRGWGLANVLAALQAGMTNYEATLGGIGGQ
                     PANFVDGVPVSGTGAYYYKDAESVGLVSLEDMIVMMDEMDIETNLDIDRILKTGKMVE
                     KILGKRLRSETINQGRIPKKLSGRK"
     gene            844..2961
                     /locus_tag="QF480_08220"
     CDS             844..2961
                     /locus_tag="QF480_08220"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF025010.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HJN06587.1"
                     /translation="MAAIGSIRKHSTFLVIVIGIALAAFVLGDFAKGGGGSRNVNVGE
                     VEGEEITIMDFNYEAERNIDATMQQQEKDRLTPEEMFTVKEQTWKGIVQRIILDNEYE
                     ALGLSVTSDELFDLIQGPNPHALIKQYFVDPNTKVYDRNLVVQYLQSMETLPEEAKQQ
                     WVRFEKYIKDDRLRQKFNILISKGYYVPSDIARIAYNEKNDKADIDYVAAKFVDIKDS
                     LFNPTDEDYADYYSDHKEKYEQKASRDIEYIIFNIVPSGQDIEDSKREMDQIAEEFIE
                     TVDVIRFVKVNSDTPLDTSWFAKGKLPVQIDSLMFNSKIGTVSKPYRLTNAFHVARLM
                     EVGYRPDSLKASHILISYVGAYNARSEVTRDKDQAKALADSLFNVLKRRPGSMVELAK
                     EFSNDPSVEQNNSDLGWFEDGRMVYAFNEAVYNTKIGKFTIAETPFGYHIIEVTGKKE
                     LVKKVKVATIDREIYASDMTYQNTFAKASKIATECENEEEFNDFVTEQRLNKRTMPVL
                     REMSNYIAGLKNPRQIIRWAFNPDTETGNVSSVFDLEDMFVVAVLTAKVDEGYPTLDQ
                     VKERIQLNVYNQLKGEYFTNKMNELNDNFEAIKTEMNTVDKNVNPLFFSTRNLPGFTI
                     ENKVIGEIFGMESGTVSKPIIGNSGVFVVKVNDITLSGDITNYSPIIVELQSAFIKRV
                     DQDYPFTALKESVDIVDNRIDFY"
     gene            3150..>3351
                     /locus_tag="QF480_08225"
     CDS             3150..>3351
                     /locus_tag="QF480_08225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06588.1"
                     /translation="MSKPILILLFLFIPILFTQCKKDDENWTYCVDCEISAWVGTYEG
                     AGVYFSDTDGKTIIDVPTTVTID"
BASE COUNT         1149 a          477 c          667 g         1058 t
ORIGIN      
        1 ggaacagtaa gtacaatttg gggttgccct attgaaggcc caactgaact aagtgcagct
       61 gtagatttta cacaaaggtg gtttgacatt ggcgcaaacg atgttgaaca tgctgatcat
      121 gatggtagcg cctctcctga tcgtgttttt agttatttct cgatgttatt agacaaagtt
      181 tctaaccctc acaaacaaat tgttcatttt catactaccc gaggatgggg acttgcaaat
      241 gtgcttgctg ctttgcaggc aggtatgaca aactacgaag ctacacttgg cggtattgga
      301 ggacaacctg ctaattttgt cgacggagtt cctgtttcag gaactggagc atattattac
      361 aaagatgctg aatcagttgg attagtatct ctggaagaca tgattgttat gatggatgaa
      421 atggatattg aaacaaatct tgatattgac cgaatcctca aaacaggaaa aatggttgaa
      481 aaaattcttg gaaaacgtct gagatctgaa acaattaatc aaggaagaat tccaaaaaaa
      541 ctgtctggaa ggaagtaatt ttgtgaatag cgaatattaa gactgcggtt ttcgacctaa
      601 tcatccccct ttctgtacta agaaaatagt taaagtggtg ctttttttgt tggtatcaca
      661 attgttcatt attctaattc atagtattac tatgttattt aatgtagtgg tgaacaggaa
      721 tttgagacca ataaatgata caattttgga tattgtgaaa gcgaattaat ttaataaaaa
      781 gttttttttc atacttcaat attcatttgt acatttgcac ctcaattttt taaaaataat
      841 acgatggcag caataggaag tattagaaag cattcaactt ttcttgttat agtaataggc
      901 atagcgctgg cggcatttgt tcttggcgat tttgctaaag gtggcggagg ttcacgtaat
      961 gttaatgtag gtgaagttga aggagaagag atcacaatta tggatttcaa ttatgaggct
     1021 gaaaggaata ttgatgcaac tatgcaacaa caggaaaagg atagattaac acccgaagaa
     1081 atgtttactg taaaagagca aacgtggaag ggtatagttc aacgcattat tttggataat
     1141 gaatatgaag cgcttggatt gtcagtaact agtgatgaac tattcgacct tatacaggga
     1201 cctaatccac acgcactgat taagcagtat tttgttgatc caaatactaa ggtatacgat
     1261 aggaatctcg ttgttcagta tttacaaagt atggaaacat tacctgaaga ggctaaacag
     1321 caatgggtaa gatttgaaaa atacattaaa gatgataggc tgaggcaaaa atttaatatt
     1381 cttatatcca aaggatatta tgttccaagt gatattgccc gtatagcgta caacgaaaag
     1441 aacgataaag cagatattga ttatgtagct gcaaaatttg ttgatataaa agatagtctc
     1501 tttaatccta ctgatgaaga ttatgctgat tattattctg atcataaaga gaaatatgaa
     1561 caaaaagcct ccagggatat tgaatatatt atttttaata tagttccttc aggtcaagat
     1621 attgaagatt ctaaaagaga aatggatcaa attgctgaag agttcatcga aactgttgac
     1681 gttattcgtt tcgttaaggt aaattcagat acaccacttg ataccagctg gtttgcaaaa
     1741 ggaaaattac cagtacaaat cgattcatta atgtttaaca gcaaaattgg aactgtttct
     1801 aaaccgtata ggttaactaa tgcatttcat gttgctcgtc taatggaggt agggtataga
     1861 ccagactcac tgaaagcttc ccatatacta atttcctatg ttggcgcata taatgctcga
     1921 tcggaggtta cacgggataa agatcaggca aaggctttgg ccgatagctt gtttaatgtg
     1981 ttaaaaagga gacctggtag tatggttgaa ctggcaaaag aattttctaa tgacccgtcg
     2041 gttgagcaaa ataacagtga tctaggatgg ttcgaagatg gtagaatggt ttacgcattt
     2101 aatgaggcag tttacaatac gaaaattggt aaattcacaa ttgctgagac cccatttgga
     2161 tatcatatta ttgaagtcac aggaaaaaaa gaacttgtta aaaaagtaaa agtagctact
     2221 atcgatcgag aaatttatgc cagcgacatg acataccaga atacttttgc taaagccagt
     2281 aaaattgcta ctgagtgtga aaatgaggaa gagtttaatg attttgttac tgagcagaga
     2341 ctgaataaaa gaactatgcc agttttacgt gaaatgagca attatattgc aggtcttaaa
     2401 aatccacgac aaattattcg atgggcattt aatccagata ctgaaaccgg taatgtgtca
     2461 agtgtttttg acttagaaga tatgtttgta gttgcggttt taactgcaaa ggtagatgaa
     2521 ggttacccaa ctcttgatca ggtaaaagaa agaattcaac taaatgttta taatcagcta
     2581 aaaggtgaat attttactaa caagatgaat gaattgaatg ataattttga ggcaataaaa
     2641 actgaaatga atactgttga taaaaatgta aatcctttgt ttttctcaac acgtaatcta
     2701 cccggtttta caatcgaaaa taaagttata ggtgaaatat ttggtatgga aagtggtaca
     2761 gtttctaaac caataattgg caactctggt gtttttgtgg ttaaagttaa tgatattact
     2821 ctttctggtg atataactaa ctattcacca ataattgtcg aacttcagtc tgcatttatt
     2881 aaacgagttg atcaggatta tcctttcact gctttaaaag agtctgttga tattgttgat
     2941 aatagaatag acttttatta acaaagtttc aataatagtc atatagaagt gctacttatc
     3001 aaatgatagg tagcattttt tgtgatttca aacaactact gtgtggcacc atggcttttc
     3061 catatttgaa taagaacctg caatttcaac aatgtgcctg ttaaaatatt gtggtaacat
     3121 aaaatatcat ttactacttt tgttttaata tgagcaaacc aatattaata ttactcttcc
     3181 tatttatacc tattttattc acacaatgta aaaaagatga tgagaattgg acctattgtg
     3241 ttgattgcga aattagcgca tgggtaggga cctatgaagg tgcgggtgta tattttagcg
     3301 atactgatgg caaaacaatt atagatgttc caacaacagt tacaattgat a
//
LOCUS       DASCQP010000480         3589 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001752820, whole genome shotgun sequence.
ACCESSION   DASCQP010000480 DASCQP010000000
VERSION     DASCQP010000480.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3589)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3589)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3589
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001752820"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1663)
                     /gene="sprA"
                     /locus_tag="QF480_08230"
     CDS             complement(<1..1663)
                     /gene="sprA"
                     /locus_tag="QF480_08230"
                     /inference="COORDINATES: protein motif:HMM:TIGR04189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell surface protein SprA"
                     /protein_id="HJN06589.1"
                     /translation="MKIDKIYITTIKFLFPGLLAFLLLVSDIVLSQNNVLPDSTSSSD
                     TSSVNLMFPFNDFTGNPYVDGQNSSPLFLNPPSNIEREIKYNPETNTYEFVNKIGDFL
                     YRTPTEMDFDEFQKYELERDVADYWNERTQTAGTAEGERLIPKIYIGGEAFDRIFGSN
                     TIDIRPQGSAEVSFGILSTKRDDPALDVRQRKTTNFDFNMKIQMNVVAKIGDKIEFKA
                     NYNTESSFDFENTLKLKYEGKEDEIIKLIEAGNVSLPLRSTLISGSQSLFGVKTELQF
                     GKTHVTAIFSQQQSETKNITVEGGAQTSRFKMTALDYEQNKHFFFAHSFRELYPKALA
                     SLPIIASDVNITKVEVWVTNTGAATEENRNIVAFTDLGEGNQKDIYSPYIHALPGGLR
                     PSNYSNSLMSSLDTNQIRQINSVTNYLSGDPFHIGKSNYFVAGEDYVKLENARKLRAT
                     EYNINQKLGFISLNTTLYSDQVLAIAVQYTVIGSDSVYQVGEFSDQGIVAPDNLVVKL
                     LKSNTLNTRMPMWRLMMKNVYAIGAYQVQKQNFMFNILYSGNKQGV"
     gene            complement(1704..2285)
                     /gene="ruvA"
                     /locus_tag="QF480_08235"
     CDS             complement(1704..2285)
                     /gene="ruvA"
                     /locus_tag="QF480_08235"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013618490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009379 - Holliday junction helicase
                     complex [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HJN06590.1"
                     /translation="MYDYLKGRLVEKNPTYIVIDVNGVGYMVNISLTTYSKIKDKENI
                     KVFIYFVVREDAQLLYGFADENERMLFSQLITVSGVGANTARLILSSLSTEETFDAIV
                     LAKANVLQGVKGIGGKTAQRIIIDLKDKLIKSGIELEKIDQTHNTIREEALSGLLILG
                     FNKLSAEKAIDKVLKSDDVVDVEGLIKEVLKML"
     gene            complement(2415..>3589)
                     /locus_tag="QF480_08240"
     CDS             complement(2415..>3589)
                     /locus_tag="QF480_08240"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: protein motif:HMM:NF014798.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008661 - 1-deoxy-D-xylulose-5-phosphate
                     synthase activity [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HJN06591.1"
                     /translation="RKSNLFEAMNFKYFGPIDGHNVSNLVKILSEIKNISGPKLFHVI
                     TTKGKGFKKAEEKQTVYHAPGKFNRITGELLKVEADTLPATYQKVFGKTLVEIAEKNE
                     KLVAITPAMPTGSALTYMMEKFPARVFDVGIAEQHAVTFAAGMAAEGLKPFCTIYSTF
                     LQRAYDQVIHDVALQKLPVVFCIDRAGLVGEDGATHHGAYDMAFMNNIPGMVISAPMN
                     EVELRNLMFTAFNYYSGPFSIRYPRNRGVLNDWNIPLERIEVGKGRCLAVGNEIAILS
                     IGYAGNFVEEALNQLAMDNIYPGHYDMRFLAPIDEEMLRHIFENYTQIITVEDGSITG
                     GLGTIVAVAKSTHNYTGKLISLGIPDRFIGHGDIETLHKACGYDADSIVITVKSIR"
BASE COUNT         1093 a          710 c          571 g         1215 t
ORIGIN      
        1 gaactccctg cttattacca gaataaagaa tgttaaacat aaaattttgt ttctgaacct
       61 ggtatgctcc aattgcataa acattcttca tcatcagtct ccacatgggc attcttgtat
      121 tcagagtatt actttttaat aatttaacaa caagattgtc aggtgccaca attccctgat
      181 ccgagaactc accaacctga taaacactgt cgctaccaat aacagtatat tgaaccgcaa
      241 tagcaagaac ctgatcagaa tataaagtgg tattaagcga gataaatcca agtttttgat
      301 ttatgttgta ttccgttgct ctaagtttac gtgcattttc aagttttacg tagtcttcgc
      361 cagcaacaaa ataatttgat ttgcctatat gaaaggggtc tccggaaaga taattagtca
      421 cagaattaat ttgtcttatc tggtttgtat ccaagctact cattaaactg ttggaataat
      481 ttgaaggtcg caaccctcct ggcagtgcat gtatataagg gctatatata tctttttgat
      541 ttccttctcc aaggtcggta aaggcaacaa tatttctatt ctcctcagtg gctgcacctg
      601 tatttgtaac ccacacctca acttttgtaa tgttaacatc agaagctata ataggcaaag
      661 atgcaagtgc ttttgggtaa agttctcgga atgagtgagc aaagaagaag tgcttattct
      721 gttcataatc aagtgcggtc attttaaacc tgctggtttg agcaccgcct tcaacagtta
      781 tatttttcgt ttcgctttgc tgctgtgaga atatagctgt aacatgtgtt ttaccaaact
      841 gtagctctgt ttttacaccg aataaactct ggctaccgct aattaacgtt gatctaagtg
      901 gaagacttac gttaccagcc tcgataagct taatgatctc atcctctttg ccttcatatt
      961 tgagtttaag tgtattctca aaatcaaacg aagactcggt gttataattt gctttaaact
     1021 caattttatc accaattttc gcaacgacat tcatttgaat cttcatgttg aaatcaaaat
     1081 tcgttgtctt tctttgcctt acatcaaggg ctgggtcatc tcttttagta gataatattc
     1141 caaagctaac ttctgccgaa ccctgaggac gaatatcgat agtattactt ccaaatatcc
     1201 tgtcaaatgc ttcgcctcca atatatattt tgggtattaa tcgttcacct tcagcagttc
     1261 ccgctgtttg agttctttca ttccagtaat cagcaacatc acgttcgagt tcatactttt
     1321 gaaattcatc aaaatccatc tcggtaggtg tgcgatataa gaaatcacca atcttgttta
     1381 caaactcata ggtatttgtt tcggggttat atttgatttc gcgttcaata tttgatggcg
     1441 ggtttagaaa taaggggctt gagttttgtc catcaacata tgggtttcca gtaaaatcgt
     1501 taaatggaaa catcaaattt acagatgaag tatcagagct tgaagttgaa tcgggaagaa
     1561 cattattttg tgataataca atatcagaaa ctaaaagcag aaatgctaat aagcccggaa
     1621 aaagaaattt aattgttgta atgtatatct tatcaatctt caaagtcttc agtttttatc
     1681 gcttttacct gttagcgtaa accttaaagc attttcagta cttccttaat caatccttca
     1741 acgtcaacca catcatcaga tttaagcact ttatcaatag ctttttcagc actgagcttg
     1801 ttaaagccca atatcagtaa acctgataac gcttcttccc taattgtatt gtgggtttgg
     1861 tctatttttt cgagttcaat tcctgattta attaacttat ccttcaaatc gataattata
     1921 cgttgagctg tttttcctcc aatcccttta actccttgaa gcacatttgc tttggcaaga
     1981 acaattgcat caaatgtttc ctctgttgaa agtgaggaca gaatcaatcg tgcagtatta
     2041 gctccaacac ctgaaacggt tatgagctga ctaaataaca tacgttcatt ttcatcagca
     2101 aaaccatata ataattgtgc atcttcacga acaacaaaat agataaagac tttaatattt
     2161 tctttgtctt tgatttttga ataggttgtt aatgagatgt ttaccatata accaacacca
     2221 ttaacatcaa tcacaatata ggttgggttc ttttcaacca gcctgccctt aagataatcg
     2281 tacattctgc tttattgatt ttgtacctgt ttaaactgaa tcctaaccgg caaaaataca
     2341 atttatagga aattagacaa cgtgattgtc aaccgaaaaa taatccaaaa aggaaatcat
     2401 cttgtgccag tcagttatct tatactttta acggtaatta ctatactatc agcatcataa
     2461 ccacaagctt tgtgcaaagt ttctatatcc ccgtgtccaa taaatctatc agggataccg
     2521 agtgaaatga gtttgcctgt ataattatgg gtgctttttg caacagctac aattgttcca
     2581 agcccacctg taatactacc atcctcaacc gttattattt gggtgtaatt ctcaaaaata
     2641 tgacgaagca tttcttcatc gatcggtgct agaaaacgca tgtcgtaatg acctgggtaa
     2701 atattatcca tagcaagttg attaagagct tcttcaacaa agttaccagc gtaaccgata
     2761 ctcaatattg caatttcatt accaactgct aaacatcttc ctttacctac ttcaattctt
     2821 tctagaggaa tattccaatc attaagtact cctctattcc tcggatatct tatggagaaa
     2881 ggacccgaat aataattaaa cgcagtaaac attaaattcc gtaattctac ttcgttcatt
     2941 ggagcactaa ttaccatacc aggaatgtta ttcataaatg ccatatcgta agcaccatgg
     3001 tgagttgctc cgtcttcacc taccaaacca gctctgtcaa tgcagaatac aactggcaat
     3061 ttttgcaagg caacgtcgtg gattacctga tcgtaagctc gttgcagaaa tgttgaataa
     3121 attgtgcaaa atggtttaag gccttcagcc gccatacctg cagcaaatgt aacagcatgt
     3181 tgttcagcaa ttccaacatc aaaaactcta gctggaaatt tttccatcat ataagtaagt
     3241 gcagaaccag ttggcatagc tggagttata gcaaccagtt tttcattttt ctcagctatc
     3301 tcaactagag tttttccaaa aactttttga tatgttgctg gcaaagtatc agcttccact
     3361 ttcaataatt cacctgttat tctattaaat ttacctggtg catgataaac tgtttgtttt
     3421 tcttctgctt ttttaaatcc tttaccctta gtggttatta catggaataa ttttggccca
     3481 cttatatttt ttatttcaga taaaatctta acaagatttg acacgttatg tccatcaata
     3541 ggtccaaaat acttgaagtt catagcttca aataggttgc tttttctct
//
LOCUS       DASCQP010000481         2017 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001752857, whole genome shotgun sequence.
ACCESSION   DASCQP010000481 DASCQP010000000
VERSION     DASCQP010000481.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2017)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2017)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2017
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001752857"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..518)
                     /locus_tag="QF480_08245"
     CDS             complement(<1..518)
                     /locus_tag="QF480_08245"
                     /inference="COORDINATES: protein motif:HMM:NF024002.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phophatidylserine decarboxylase associated
                     domain-containing protein"
                     /protein_id="HJN06592.1"
                     /translation="MKTKTILLTLSVMLTLTTLIFQSCTTDNCAKENTASITPIEGVF
                     QYLSPLQGQAIMNHELHIGNWLPKDKQHIETWIKDLKQRVKDEPKHLDLVAPIQEFKD
                     LVDNEPNLKLLADKMFKDSAKLKKLDPLGSPELDNFDDFLVLLNAIMTQAPEYTEYQD
                     PKTGALEPCGLIG"
     gene            complement(572..1996)
                     /locus_tag="QF480_08250"
     CDS             complement(572..1996)
                     /locus_tag="QF480_08250"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN06593.1"
                     /translation="MKNLIMFSAVFTFLVNILIAQNDFSQISKRLSQENKYEHNSLIK
                     PILSPKGEFTINAFNHIDHINKSKTRGANNLYTLDSIHSSVRDTVTNDWVFDYSSEYT
                     YDANGNILSNIISHWDTDINDWVFDYKYEYNYDPFGNTLSDISSFWDTNINDWVFDYR
                     SEYTYDANGNQTLRVDYAWNTAVNDWDNTWKEEVTYDANGNRTLLLFYQWNTDINDWD
                     NTWKEEITCDANGNHILTILYTRDTQLSEWVRYQKWEHQYDSNGTLMAQIYSDWDTDI
                     NDWVFDYKYEYTYDSIGNLASAVNSVWNTAINDWMYSWKGGGTHNENGNWILWYEYLW
                     NADINDWVFSKYIFYTYDVNENLMLKLKSAWDTDISDWVLYLKEEYYYSETSEINEVT
                     NNEAFTIFPNPTSGNLNIIGEGSLNQNVTLDLTNLNGQLIYSNQFYLTNIKHNIKLPK
                     LPKGMYILTIKANNISSTQKIFIE"
BASE COUNT          657 a          362 c          270 g          728 t
ORIGIN      
        1 ccaatcaacc cacaaggttc taacgcacca gttttaggat cttgatactc agtatattcc
       61 ggcgcctgag tcatgatagc attcaataac acgagaaagt catcaaaatt atcaagctct
      121 ggactaccta agggatccag ctttttcaac ttagccgaat ctttaaacat tttatcggca
      181 agtaatttta aatttggctc attatcaaca agatctttaa actcttgaat cggcgcaacc
      241 aaatccaaat gttttggctc gtcttttact cgttgtttaa gatcttttat ccaagtttca
      301 atgtgttgct tatcttttgg taaccaatta ccaatatgaa gttcatggtt cattatcgct
      361 tgaccttgta atggggacaa gtattgaaaa acaccttcta ttggagttat agaagctgta
      421 ttttccttag cacagttgtc tgttgtacaa gattgaaaaa taagagttgt taaagtcaac
      481 attacactta atgtaagaag aatagttttt gttttcattt taattccttt cttttttagt
      541 ttatttattt tccctcttgt ttattttgag gttactcaat aaatatcttc tgagtactac
      601 taatattatt agcctttatg gttaaaatat acatcccctt tggtaatttg ggtaatttaa
      661 tgttatgttt aatatttgtt agataaaact ggttactata aattaattga ccattaaggt
      721 ttgtcaaatc aagggttaca ttttgattta aagatccttc gccaattata tttaaattcc
      781 ctgaagtcgg attaggaaat atagtaaacg cttcattatt ggttacttca tttatttctg
      841 aagtctcgga ataataatac tcctctttca gatataaaac ccaatcgcta atatcggtat
      901 cccaagcaga tttaagtttc aacattaggt tttcattaac atcataggta taaaaaatgt
      961 atttggaaaa aacccaatcg tttatatcag cattccataa atactcatac cacaaaatcc
     1021 aatttccatt ttcattatga gttcccccac ctttccaact atacatccaa tcgtttatag
     1081 cagtattcca tacagaattt acagcagacg ctaggtttcc aatagaatca taagtatact
     1141 cgtatttata atcaaaaacc caatcgttta tatcagtatc ccaatcagaa taaatttgcg
     1201 ccattagggt tccgttagaa tcatattgat gttcccattt ttgatatcta acccattcgc
     1261 ttaattgagt atccctagta tacaagattg tcaaaatgtg attcccatta gcatcacaag
     1321 tgatttcctc tttccaagta ttatcccaat catttatgtc agtattccac tggtaaaata
     1381 ataacaaagt acgattccca ttagcatcat aagtgacttc ctctttccaa gtattatccc
     1441 agtcatttac agcagtattc caagcataat caaccctcaa agtttgattt ccatttgcat
     1501 cataggtata ctcgctgcga taatcaaaaa cccaatcgtt tatattagta tcccaaaagg
     1561 aagaaatatc cgacaatgtg tttccaaaag gatcataatt atactcgtat ttataatcaa
     1621 aaacccaatc gtttatatca gtatcccaat gagaaataat attcgacaat atgtttccat
     1681 ttgcatcata ggtatactcg ctgctataat caaaaaccca atcgttagta acagtatccc
     1741 ttacagagga gtgtatagaa tccaatgtat acaaattatt agctcctctg gttttacttt
     1801 tattgatatg atctatatga ttaaaagcat taatagtaaa ttcacctttt ggtgatagaa
     1861 ttggtttaat taaagagtta tgctcatact tattttcttg agataatcgt ttagaaatct
     1921 gtgaaaaatc attttgagca attagtatgt tcactaaaaa agtaaacact gctgaaaaca
     1981 taattaagtt tttcattttt tttttttttt tttataa
//
LOCUS       DASCQP010000482         2400 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001753199, whole genome shotgun sequence.
ACCESSION   DASCQP010000482 DASCQP010000000
VERSION     DASCQP010000482.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2400)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2400)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2400
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001753199"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            336..1271
                     /locus_tag="QF480_08255"
                     /pseudo
     CDS             336..1271
                     /locus_tag="QF480_08255"
                     /inference="COORDINATES: protein motif:HMM:NF016274.3"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004668 - protein-arginine deiminase
                     activity [Evidence IEA];
                     GO_process: GO:0009446 - putrescine biosynthetic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="agmatine deiminase family protein"
     gene            1938..2255
                     /locus_tag="QF480_08260"
     CDS             1938..2255
                     /locus_tag="QF480_08260"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN06594.1"
                     /translation="MIDGDLLSEIDDVTLTEVHISAYPNPFTNQLNFIIRNSESNEVA
                     IQIFDYNGRLILDKLKHLISSNENHITINIGEVKAELKPGLYFYRITSGNTTRSGKLI
                     RIE"
BASE COUNT          836 a          399 c          424 g          741 t
ORIGIN      
        1 tatggagtta aaacaacatt acccatttct aataaaacag ttgaaatagt aatggctaac
       61 accatagaac aaaaagagtt acttgctgtt tttaatatcg aattttagct ttaggtgacc
      121 catttggcga aaacaggagt atgaacaatt tgttgcaaaa caaccaacaa cttcatactt
      181 ttgtctgcac taatatataa aacactaaac caaatatttc tattatgaaa gtgaaagtac
      241 taactataac aatcatcgca ttattttttg gtaatgtgat aataggacaa acacaacccg
      301 attggcgtaa gctccattac ttatctgaag aggaaatgct tactccattt acaaaatcaa
      361 agacttttta tccaacggat cctcctgaag ggattatcag aaatgtggca gaatttgacc
      421 aaatgcaagg agttctgatc agatatccat ttggtattcc tatggagtta ataagagaaa
      481 tggcggagga tattatggtt gttacgcttg ttgccaatgc ttctcaacag caaaccgtta
      541 caacgcaata ccaaaataat aatgtaaatc ttgaaaattg tgacttttta atagccccaa
      601 ccaatagtta ttggacaaga gattacggac catggtttgt tttcgatggg aataatcaac
      661 ccggaattgt caattttcct tacaatagac ctcgcccaaa tgatgatgat gttccgataa
      721 gaatgtcaga atatcttgat attgatctat atggaatgga ctgaataagc actggaggaa
      781 actacatgtg cacaggcaag gggctttcag catccacgga tttagtatgg gatgaaaacc
      841 ctacgcttac tcatgaagaa gtttcgggat tcatcaacga ctatcttggg aatccaattt
      901 atgacgtact tgatgatcca ttaggagagt acattaaaca cattgattgt tggagcaaat
      961 acctatctcc taacaaaata ttgctcggtc aggttccaac taccgataat cgttatcagg
     1021 attatgagga tttggcagat tactttgcat ctcaaacaag ttcctatgga acaccttttg
     1081 aagtttatcg cgtttttact ccaggtgatt atccatatac accatacact aactctttaa
     1141 tactaaacaa taaggtacta gtaccaatta ccggaggccc atatgataac gatgctcttg
     1201 cagcttacga agaagctatg ccgggttatg aaattatagg cattatgtat aatggatggg
     1261 aaaatactga tgcattacat tgcagagcaa agggtattgc tgacattggc atgctttata
     1321 ttgatcatat gccaactctt ggaactgttg catatcatcc tgaatatgat atttcagcag
     1381 atattacggc ggcaagcgga tcaaatattt atgccgattc tgtacttatt tattataaaa
     1441 taaatagtgg caattataca tcaacagtta tggaatatgt tagcgatgta acatacacag
     1501 gcactattga gggtgtaatg ccaagcgata ctgtttccta ttatttattt gcagcggatg
     1561 agtcaggaag aaatgcaaaa caaccattta ttggtgagcc tgatccattt gtatttaaaa
     1621 atgtttattt cccacaaact gaacttgcat ttaacccaga tactgtatta tttgaaacta
     1681 cggaagatat gatatatggt atccctttac atattactaa tttaacatca gacatagtta
     1741 ctattaattc aattactgaa tatggtgacg aatttatgtg gtatgttgaa gaaatgccag
     1801 acttgcctta tgtgctttcc gaagacgaca ctcttaattt gaatatactt tgcgatctcc
     1861 ccgtttctaa atttggcgaa ctagtaattg atacaatgtt aattgaaact gatttggata
     1921 tatatgctga accaataatg atagatggtg atcttctttc tgaaattgat gatgttacat
     1981 taactgaagt gcatatttcc gcttatccga atccgtttac taaccagctt aatttcatta
     2041 tcaggaattc tgaaagtaat gaagtagcga ttcaaatatt tgattataac ggtagattaa
     2101 tactggacaa attgaagcat ttaattagta gtaatgaaaa tcatatcact ataaatattg
     2161 gagaagtaaa agcggagctg aaaccgggat tatacttcta cagaataaca agtggaaata
     2221 ctactagaag cggaaaactg atacggattg aataatttga aatcttccta tcgaaaacca
     2281 aaaccaaaca ttaattcaaa atgaaaagta aaatgaaaaa aataacaata attctttttg
     2341 tgttatttgg aatgttcagc acaacattct cacaaaaaga ttcagattta aatagagaag
//
LOCUS       DASCQP010000483         5785 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001755618, whole genome shotgun sequence.
ACCESSION   DASCQP010000483 DASCQP010000000
VERSION     DASCQP010000483.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 5785)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5785)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5785
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001755618"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..857
                     /locus_tag="QF480_08265"
     CDS             <1..857
                     /locus_tag="QF480_08265"
                     /inference="COORDINATES: protein motif:HMM:NF039990.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DcaP family trimeric outer membrane transporter"
                     /protein_id="HJN06595.1"
                     /translation="GDFYTGNTGVLSRIRLREAFIELGGLLLGQTNTTFGNANVVPAT
                     IDFEGPNSAPTLRNPMIRYATRIGKGWSYSLAIEMRGTDISTFVKTGKPFKAIPGLVG
                     NINKKGDWGVITLSGMVDITRYFYADSVTGLGVVTHADIGYGGALSAIINTWKKDHFS
                     IFFVTGKGVSNFISDLSGLGYNGVPDYSTKKLVLLNSTGGFIAYTHYWNHQFSSNIIY
                     SYVNLEKTVLLTKNDFKHSNYALINLFYAPFEQLNFGVEYVWGELFVQDHRNGDANRL
                     QFLAQFNF"
     gene            complement(902..1318)
                     /locus_tag="QF480_08270"
     CDS             complement(902..1318)
                     /locus_tag="QF480_08270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007573749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dCMP deaminase family protein"
                     /protein_id="HJN06596.1"
                     /translation="MKDKKFDSSYIKMAHVWAENSYCDRRKVGALIVKDRMIISDGYN
                     GTPSGFENICEDEEGNTKAYVLHAEANAITKVAKSHNSSQGATLYITDSPCIECAKLI
                     IQAGICRLVYSKKYRITDGLDLLERAGIEIDQIASS"
     gene            1398..1631
                     /locus_tag="QF480_08275"
     CDS             1398..1631
                     /locus_tag="QF480_08275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix protein, CopG family"
                     /protein_id="HJN06597.1"
                     /translation="MATFTSSLPDSMLQELSKKAKELSLPKNKIIERALSIYLDQLNK
                     AEYIKSYKRAANDADITLIAEEGMVDYLQQLDK"
     gene            1628..1960
                     /locus_tag="QF480_08280"
     CDS             1628..1960
                     /locus_tag="QF480_08280"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014505.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004521 - RNA endonuclease activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HJN06598.1"
                     /translation="MRQREIWYANLNPTRGNEQTGYRPVLIISGNMLNKYLEIVIACP
                     LTTKIKNYKGNLVIEPTKQNGLKSKSEILTFHIRSISKDRLMKKIGAISYDELEQIRI
                     GLEDILKY"
     gene            complement(2054..4870)
                     /locus_tag="QF480_08285"
     CDS             complement(2054..4870)
                     /locus_tag="QF480_08285"
                     /inference="COORDINATES: protein motif:HMM:NF012546.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HJN06599.1"
                     /translation="MRLRPLFIFVLVSLCFSGLNAQEKIPLDHSVYDDWKSIQNSAIS
                     NDGRWVTYTKNPQLGDGELFLYDSKNKTYDSIQRGYKAKLSSNSNLLIFSIKPQFDTV
                     REAKLKKVKKDKLPKDSIGIWIIGTGDIIKFADLKSVKIPEDKSDWIAFMIKEKSAPN
                     KDTVSSDTTEVKKDSKNMSKKKKKQKGDLLVVMNPVTGDSVSFKNITKYALSKNGDLC
                     AFISIAGDSIDSVQIAYYNTKKQKYTSVYSEPGFSENISVDEKGKQLTFTYSSDTIKE
                     KVFGLYYQNISKNNLTLVSGDNFSNLTEDWSVSKNGKIYFNESGSDLYFGTAPKPEPT
                     PKDTLTDDEKVSVDVWNWKDIQLQPQQLKQLDKEKKRSYTAVYFPKKNELVQLADTQI
                     KYVNINPKSKGKYCLGYDYKPYQRMTSWEASRYKDVFLINKETGEKNLVLQKVASSVQ
                     ISPKQDFILWYNIADSSWNSFSVSTEESVNLTSSMDINFYYELNDVPNEAYPYGIAGW
                     TKNDSPVIYDKYDLWLFDGNGEKEPTNITKQEGKTNDIRFRYVKLDKELQHLPEKLLL
                     RAFNFTNKDAGFYSLDLGKEDSPKKLIIESYQYNTPVKAKKAEKLIWTKQSFQVYPNL
                     YISNSDFSSRVKITDANPQQNNYIWGKVELVDWISFNGDSLKGLLYKPENFDPEKKYP
                     MLVYFYERYSNSLHRYYTPKPIRSVINFSYYVSNGYLLFIPDIVYSVGYPGPSAFDCI
                     VSGTQTMCDKYPYIDRDRLGIQGQSWGGYQVAYLVTKTNMYRAAMAGAPVSNMTSAYG
                     GIRWGSGMSRAFQYEQTQSRIGGNLWDKLPLYMLNSPLFSADRIETPLLIMHNDKDGA
                     VPWYQGIELFNAIRRLDKPVWMLVYNGAPHNLKRRANSKDLTIRMQQFFDFYLKDAPE
                     PIWMKDGVPAIKKGKTFGLEVEGD"
     gene            complement(5072..5500)
                     /locus_tag="QF480_08290"
     CDS             complement(5072..5500)
                     /locus_tag="QF480_08290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015548011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GtrA family protein"
                     /protein_id="HJN06600.1"
                     /translation="MTEIGGVLNQSYFFKFIKFGLVGFSGLFIDFGITYLAKEKLRIP
                     KYIANAIGFTTAATSNYFFNRVWTFQSKNPEVMVEFTEFFLISMVGLGLNTFLLWLLV
                     SKFKINFYLAKVFATVLVTIWNFLANAFITFNPNRAIMIY"
BASE COUNT         1890 a         1000 c          926 g         1969 t
ORIGIN      
        1 ctggagactt ttacacaggt aataccggtg tgctatcgag aattagactt agagaagctt
       61 tcattgaatt aggaggcctt ttgttaggtc aaacaaatac cactttcgga aacgctaatg
      121 ttgttccggc aactattgat ttcgaaggtc caaatagtgc tccaactctt aggaacccta
      181 tgattagata cgccaccagg attggaaaag gatggagtta tagtctggcc atcgagatgc
      241 gaggaaccga tattagtact tttgtaaaaa caggaaaacc atttaaagca ataccgggtt
      301 tggttgggaa cataaacaaa aaaggtgact ggggtgttat cacgctcagc ggtatggtcg
      361 atattactcg ctatttttat gctgattctg ttacaggatt aggagttgtt acacacgctg
      421 atataggata tggaggagca ttatccgcaa ttatcaatac ctggaaaaaa gatcatttta
      481 gcattttctt tgtaacgggt aaaggagtat ctaattttat ttcagattta agtggtcttg
      541 gttacaatgg tgtacccgat tacagtacaa aaaaattggt gttactaaat agcacaggtg
      601 gttttatagc atacacacat tattggaacc atcaatttag ttcaaacatt atttacagtt
      661 atgtaaattt agagaaaacg gttttgctaa ctaaaaatga tttcaaacat agtaattatg
      721 cacttattaa tttattctat gctccttttg agcaattaaa ttttggtgta gaatacgttt
      781 ggggtgagct ttttgtgcaa gatcacagaa atggtgatgc aaataggtta cagtttttgg
      841 cgcaatttaa tttctagata aagaaattga aaattgctaa ggtgtaattc ttcttttcta
      901 tttaagaaga tgctatttga tcaatttcta ttcctgctct ttcaagtaaa tcaagtccat
      961 cagtaatacg gtatttctta gaataaacta atctgcatat ccctgcctga attattaatt
     1021 tggcgcattc tatacatggt gaatccgtta tgtataatgt tgctccctga ctgctattat
     1081 gtgattttgc cacttttgta atggcattag cttcagcatg aaggacataa gctttggtat
     1141 taccttcttc atcttcgcaa atattctcaa atcctgaagg ggtaccattg taaccatcag
     1201 aaattatcat tctgtccttt acaattaatg cacctacttt acgtcggtca caatatgaat
     1261 tctctgccca tacatgagcc attttgatat aactgctatc gaatttttta tccttcataa
     1321 ttgcaaaaat atattttttt gatttgcaat ttcccaaaaa tagttatatt tgtaaaacat
     1381 aaatataatt cataaatatg gcaaccttta caagtagctt acctgatagt atgttgcagg
     1441 aactaagcaa aaaagcaaaa gaattgtccc tgccaaagaa taagataatt gaacgggctc
     1501 tatcaattta tcttgatcaa ctgaacaaag cagaatatat aaaatcctat aaacgtgcag
     1561 caaatgatgc tgatattaca ttaattgctg aagaagggat ggtagattat ttgcaacaac
     1621 ttgacaaatg agacaaagag aaatatggta tgccaaccta aaccccacaa gaggtaatga
     1681 gcaaactggg tatcgtccag tattaataat aagtggaaac atgttgaaca agtatctaga
     1741 aatagtaatt gcatgtccgc ttaccaccaa aataaaaaac tacaagggca atttggttat
     1801 tgaaccaacg aagcaaaatg gacttaaaag caagtcagaa attttaacgt ttcatatccg
     1861 ttcgatatca aaggacagac taatgaaaaa aataggtgca atttcttatg atgaattgga
     1921 acaaataagg attggactgg aagatattct aaaatactag cttcttatta tatatacact
     1981 ttggctgata aattcaatat attgcatatt aagatttctt aatgtaggtt tattaagcca
     2041 tcactttaaa aactcaatct ccttctacct ctagcccaaa tgtctttccc ttttttattg
     2101 ccggaacacc atccttcatc caaattggtt caggagcatc tttcagataa aagtcaaaga
     2161 attgttgcat tctaattgta aggtcttttg agttggctct tcgcttaagg ttatgaggag
     2221 caccgttata aacaagcatc caaacaggtt tatctaatct gcgaatagca ttaaaaagtt
     2281 caatcccctg gtaccaagga acagcaccat ctttatcgtt gtgcattatt aataaaggtg
     2341 tttcaatgcg atcggcagaa aataatggag agtttaacat gtataatggt agtttgtccc
     2401 atagattacc acctattcgg ctttgagttt gttcatactg aaatgcccta ctcatgccac
     2461 taccccatct tattccacca tatgcacttg tcatattact tacgggtgca ccggccatgg
     2521 cggctctata catatttgtt tttgttacaa gatatgctac ctgatagcca ccccaacttt
     2581 gcccctggat tccaagtcga tcacggtcga tataaggata tttatcacac atagtttgtg
     2641 taccacttac aatgcaatca aatgcgcttg gtccaggata accaacgcta taaacaatat
     2701 caggtatgaa tagtaagtaa ccattactta catagtaact aaaattaata accgacctga
     2761 ttggtttcgg tgtataatat ctatgcaacg aattgctata cctttcgtaa aaataaacca
     2821 acattggata tttcttttca ggatcaaaat tctcaggttt atatagtagc ccttttaaac
     2881 tgtctccatt aaaagatatc caatcaacta actcaacttt gccccagatg taattattct
     2941 gttgtggatt tgcatctgta attttaactc tgctactaaa atcgctgtta ctaatatata
     3001 aattgggata tacttgaaac gattgttttg tccaaattag tttttcggct tttttagcct
     3061 ttacaggtgt gttgtattga taactctcaa ttatcagttt ctttggagaa tcttctttgc
     3121 caaggtccaa agaataaaaa ccggcatctt tatttgtaaa attaaaagct cgtagcaaca
     3181 atttttctgg aagatgctga agttctttat caagttttac atatcgaaat cgaatatcat
     3241 ttgtttttcc ttcttgttta gtaatgttag ttggttcttt ttcaccattt ccatcaaaaa
     3301 gccagagatc gtacttatca taaattaccg gagagtcatt tttagtccat ccagcaatac
     3361 cataaggata agcttcatta ggaacatcat tcagttcgta ataaaaatta atatccatac
     3421 tactagtaag attaactgat tcttcagtac taacgctaaa tgaattccaa gagctgtcgg
     3481 caatattata ccaaagaata aaatcttgtt ttggagaaat ctgcacactc gacgctactt
     3541 tttgtagtac tagattcttc tcccctgttt ccttatttat tagaaataca tctttataac
     3601 gactcgcctc ccatgaagtc attcgttgat atggtttgta atcatatcca aggcaatact
     3661 ttcctttact tttagggttt atattcacat atttaatctg tgtatctgcc aattgaacaa
     3721 gctcattctt cttaggaaaa taaaccgccg tataacttcg ctttttttct ttatccaact
     3781 gttttaactg ttgaggttgt aattgaatat ctttccagtt ccaaacatct acactaactt
     3841 tttcatcatc ggttaatgta tcttttggtg ttggttcagg tttaggggct gttccaaaat
     3901 aaagatcaga ccctgattcg ttaaaataaa tttttccatt tttactaacc gaccagtctt
     3961 cagtcaagtt tgaaaaatta tctcccgata caagcgttaa gttgtttttt gagatatttt
     4021 gataatacag accaaaaact ttttccttta ttgtatcgga ggaatatgta aaagtcaact
     4081 gtttaccttt ctcatcaact gatatgtttt ctgaaaaacc cggttcgcta tatacagagg
     4141 tgtatttctg ctttttggta ttgtaatatg caatttgaac cgagtcaata ctatcacccg
     4201 caatacttat aaaagcacat aagtcaccat ttttagaaag tgcatatttt gtgatatttt
     4261 tgaatgagac tgaatctcct gtaacaggat tcataacaac aagcaaatct cctttttgct
     4321 ttttcttctt tttgctcata ttttttgaat ctttcttaac ttctgttgta tcagaactca
     4381 ctgtatcttt gttaggggct gatttttctt ttatcataaa agcgatccag tcagacttgt
     4441 cttcaggaat tttaacactc tttaaatctg caaattttat tatatcacca gtaccaataa
     4501 tccagatccc aattgaatct ttcggcaact tatctttctt tacttttttt agtttagctt
     4561 ccctaacagt atcaaactga ggtttgatgc taaaaattaa caaatttgaa tttgatgata
     4621 actttgcttt atatccacgt tgaatggaat cgtaggtctt attttttgaa tcatacaaaa
     4681 aaagttcacc atcgcccaat tgtggatttt tagtataggt aacccatcta ccatcattgg
     4741 atattgcaga gttttgaatt gatttccaat catcatatac agaatgatca agaggtattt
     4801 tttcttgtgc atttaatcct gagaaacata gtgaaactaa aacgaaaatg aataacggtc
     4861 tgagtcgcat aaactatttt tttttagaaa gagttaaaga aaaattgcat tgacttcatt
     4921 gagtaattac tcttgcaaca aaagtaaaaa attgtttgat attgcatatt atattttctg
     4981 atagcaattt catattcata cataaactta gagggtgata agaattggga ttcaatgcaa
     5041 gtatcaatac ggaaacttga taatctattg attaataaat cattattgca cgattaggat
     5101 tgaatgtgat gaatgcatta gccaggaaat tccaaattgt taccagtacg gtggcaaata
     5161 ccttagccag ataaaagttg attttgaatt tgcttaccag taaccaaagt aaaaatgtat
     5221 tcaatcctaa acccaccata gatattaaaa agaattcggt gaactcaacc ataacttcag
     5281 gatttttact ttgaaatgtc cagacccgat taaaaaaata gttagaagtt gcagctgttg
     5341 tgaagccaat agcattggct atatatttag gaattctcag tttctcttta gcaagatatg
     5401 taatcccaaa atctataaat aaacctgaaa aaccaactaa tccaaattta ataaacttga
     5461 aaaagtacga ttgatttaat acgcctccga tttccgtcat aatcaatatc cggtattaat
     5521 actataattc ataatactcg tgtccttaaa ataatgtgca aatatacata tactgcgtta
     5581 ttaagtcagt tgtcactgta gtgcgctttg aattagcatc caaaattgat tccaaattaa
     5641 atttataaaa ctgaaagagc taataacaag acttttcata cttttgacga aaggtttgaa
     5701 aatggcaata ggacaacgcg aaaagaaaat aataaatgct tcctggattg caatagttgg
     5761 gaacttatta ctttcagctc ttaaa
//
LOCUS       DASCQP010000484         3012 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001755705, whole genome shotgun sequence.
ACCESSION   DASCQP010000484 DASCQP010000000
VERSION     DASCQP010000484.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3012)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3012)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3012
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001755705"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(241..1605)
                     /locus_tag="QF480_08295"
     CDS             complement(241..1605)
                     /locus_tag="QF480_08295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06601.1"
                     /translation="MHSTLGSIAQESNPILSDTVVPELKIINISEISIKSGEVWTQTN
                     RLLETLLTDEEIREIGILNDSLVELVSSLLKSDMAHDLRTKNIRYLNNKRVYWKKFND
                     VLEIQKTTLASDIKNLNEYKNDFEDEIQIWKNTKTAILEEGTEPTVIQRVVELISQLS
                     GVVDQVQQKNDKLLSMLDSTTEEGVLLIEHLDRIDKAISDKTSEIFVRHQPSFFATKY
                     NNEGNWEFREPLIFFYEMEVVELEKYMKDNIPQVVFQLVLIIILIIVFKLIKNRLLRA
                     DTDESAFYKKLLLKIFTRYISAALILGLFASILIFENRPELFKDVIRLLVVVPLIILS
                     ITLVYRKFYKYLYLFGLVIYLQFIYLVFPADNLYSLLCMLVVGIIEIFALWRLGVTMY
                     RHPLTNKVLNNLFIALVIIHIGFALVGFVALISGATMLAEVTFNIPIAVSSVGHPSYM
                     AQTA"
     gene            1878..>3012
                     /locus_tag="QF480_08300"
     CDS             1878..>3012
                     /locus_tag="QF480_08300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06602.1"
                     /translation="MKALTTFCITFFSFAMLAQSVGDTIIIPTYNYTQTQGGGIRDTM
                     IDFPDDPTQSYEKIIMLYNMRCKDGLISIPGNTNRGCGEWDYSCNTYITDSSRVDSVL
                     SYTNSYYISAFTSTTFPYVETPIYDYYQYRQKQVEIDNTISETLSTIGSGNLSLPNVL
                     ATDNNSGKSQYLYTESELSAAGITAGDIDGILLNIINSSADAEYLQVKIKHTDKTTLD
                     GNDPDIDNFTSVNFKTKSLNAGIIRFQFYTPFAWNGTSNLLVEFSFTNNNTSTPLNVE
                     GENTGIVTGIYTNNGYNLNAVNGKIDIPTGPMSSISDEITITFWSYGNENVQPIHNSI
                     LHGVDDNNNRQVNLHLPWGNSSIYWDCGNDETGYDRINKGATSD"
BASE COUNT         1049 a          541 c          474 g          948 t
ORIGIN      
        1 cccaggcgat ttggctgata aaaaccacat gtggatcgac aatagtcttt caagttcata
       61 cgaagggaat ttatatgtag catggacaaa ctttggtggt cctagccatt atgaaattgc
      121 cataagctat tcagacgatg atggacttac ctggaatgca aataatgata taagcagtgc
      181 tgttaatgct ggcagccaca accaaggcgt taacataggc acaggtccgg atggtgaagt
      241 ttatgccgtt tgggccatat atgatggatg gccgactgac gaaactgcaa ttggaatatt
      301 aaatgttact tctgcaagca tcgtagctcc tgatattaac gcaacaaaac caactaaagc
      361 aaaacctata tggataatga ccaatgctat gaataaatta tttaggacct tattagttaa
      421 cgggtgcctg tacattgtaa ctcctaatct ccaaagagcg aatatttcta taataccaac
      481 aacaagcata cagaggagag aataaagatt atctgcagga aatactaagt aaataaactg
      541 taagtagatt acaagaccaa acaagtacaa atacttataa aattttctgt atacgagtgt
      601 tattgataaa ataataagtg gtacaacaac aagtagtcta attacatcct tgaaaagctc
      661 cggtctgttc tcaaatatta agattgaagc aaatagaccc aagattaatg cagcactaat
      721 atatctagta aatattttca aaagcaattt cttatagaaa gcactctcgt ctgtatcagc
      781 ccttaacaac ctattcttaa tcaacttgaa cactatgata agtataatta tcagcacaag
      841 ttgaaatacg acttgcggta tattatcctt catgtatttc tctaattcaa caacttccat
      901 ttcatagaaa aatataagag gttctctaaa ttcccaattg ccttcattat tatatttagt
      961 tgcaaaaaat gaaggttgat gacgcacaaa tatttcactt gtcttatctg atatagcttt
     1021 gtcaatccta tctaaatgct caattaaaag tactccttct tcagtagtgc tatctaacat
     1081 tgaaagtaat ttatcattct tttgttgaac ctgatccact accccactca attgagaaat
     1141 tagctcaaca acacgctgaa taactgtggg ttctgtacct tcctccagaa ttgctgtttt
     1201 cgtatttttc catatctgaa tctcatcctc aaaatcattt ttgtactcat ttaaattttt
     1261 aatatcagag gctagagtag ttttctggat ttccagtaca tcattaaatt tcttccaata
     1321 aactctttta ttatttaggt atcgaatatt ctttgttctc aaatcatggg ccatatcaga
     1381 cttaagcaga ctactcacaa gctcaactaa tgaatcattt agaattccta tctctctaat
     1441 ttcctcatct gtcagcaagg tctccaacag cctgttggtt tgagtccaaa cttccccaga
     1501 ttttatagaa atttctgata tatttatgat ttttaattca ggtacaactg tatctgaaag
     1561 aattgggttg gattcctgtg ctatagaacc taatgtacta tgcaagctaa gcaccattaa
     1621 caaaggcaga aataatttta taaaaaattg ctggttttca tactcatcga attaatatga
     1681 ctaactatac ttttatcaat gttttattat cacactacta actaaattta atttaatagg
     1741 actaaacttc aaatataatg catttataaa tctctgctaa aaaatataaa tcaaaaatta
     1801 actgcttcga ctgttataaa aaacaaatat ctttgctgct cctaaagggt ataaacattt
     1861 taaatattaa aacatttatg aaagcactta ctactttttg catcactttt ttctcattcg
     1921 ctatgttagc tcaatcagtt ggtgacacca ttattatccc aacttataat tatactcaaa
     1981 cgcaaggcgg tggaataaga gatactatga tagattttcc ggatgaccca actcagtcgt
     2041 atgaaaaaat aataatgctc tataatatga gatgtaaaga tgggctgatc tccatccccg
     2101 gaaatacaaa ccgcggttgt ggagaatggg attattcatg taatacctat ataacagatt
     2161 catcaagagt tgattcggta ctaagctaca caaattcata ttatatttcg gctttcacca
     2221 gtacaacctt cccgtatgtt gaaacaccta tttatgatta ttatcaatac aggcaaaaac
     2281 aagttgaaat tgataatacg atttcagaaa ccttaagcac aattggatcg ggtaatctat
     2341 ccctaccaaa tgtattggct acagataata attctggtaa gtcgcaatat ttatatactg
     2401 aatcagaatt atcagcagcc ggaattacag ccggtgacat tgacggaatt ctgttgaaca
     2461 ttattaacag tagcgctgat gcggagtatt tacaagtaaa aattaaacat acggataaaa
     2521 ctactttaga tggaaatgat cctgatattg ataattttac tagcgtcaat tttaaaacta
     2581 aatctctaaa cgctggtata atcaggtttc agttttatac gccttttgcc tggaatggca
     2641 catcaaactt gctcgtagaa ttttctttca ctaacaacaa tacaagtact ccactaaatg
     2701 tagaaggtga aaatacagga attgtgacag ggatttacac caataatgga tataacctca
     2761 atgctgtgaa tggtaaaatt gatatcccta caggaccaat gtcaagcata agtgatgaaa
     2821 taacaattac cttctggagt tatgggaatg aaaatgttca acccattcat aacagcattc
     2881 ttcatggagt tgacgacaac aataacagac aagtaaatct tcatttacca tggggaaatt
     2941 cgagtattta ttgggattgt ggtaatgatg aaactggcta cgacaggata aataagggtg
     3001 caacatcaga tg
//
LOCUS       DASCQP010000485         1865 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001758008, whole genome shotgun sequence.
ACCESSION   DASCQP010000485 DASCQP010000000
VERSION     DASCQP010000485.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1865)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1865)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1865
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001758008"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(34..984)
                     /locus_tag="QF480_08305"
     CDS             complement(34..984)
                     /locus_tag="QF480_08305"
                     /inference="COORDINATES: protein motif:HMM:NF017215.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HJN06603.1"
                     /translation="MKYKIGIDVGGTFTDFFLVADNGDSIMHKTLSTPEDSSIGFISG
                     LKEIANKLSLPDTEFIDNIDTIVHGTTVATNALLTLGGAKTALITTKGFRDALEMRRG
                     VREERYNNRYKNVTPLVPRYLRYTIDERIDAEGNILSSLNYSELDKIITKINEEEVQA
                     VAICFMNSYLNKENEKLATEYLRKKLPKTFISASYEVLPSVRFYERVSTTVVNAYISV
                     VVGSYLASLIAKLEKLNFKGKLMIMQSNGGVVTPEIATKIAAVTVLSGPAAAPIAGAY
                     YADLLGYDNCITMDMGGTSFDTSLAVNNQCITNTKTDIER"
     gene            complement(1031..1786)
                     /locus_tag="QF480_08310"
     CDS             complement(1031..1786)
                     /locus_tag="QF480_08310"
                     /inference="COORDINATES: protein motif:HMM:NF013986.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008047 - enzyme activator activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydratase activase"
                     /protein_id="HJN06604.1"
                     /translation="MFFLGVDIGSLYTKLVVINSEFEVIYSDIFRTMARNNRRDEIIS
                     KIYSDYNISNTCSTGYGRKLLKTADIIKTELYCASAGITQISPIEKTIIDIGGEDFKL
                     LKSGSNGKVIEFYLNSKCAAGTGAFITEVAERAELNVSEMSKLAANSTSNKELNSFCT
                     VFAKTEIMKWIFDDTSDEDLAKGIYISIANRIQKIPADNSLPVFLIGGVAEYHPFLKN
                     VIEEKFNIQVTIPPNPQLINAFGAACIALKQFN"
BASE COUNT          577 a          341 c          259 g          688 t
ORIGIN      
        1 cgtatttgta tttagagttg gtattccaat atgttacctt tcaatgtcag ttttagtatt
       61 tgttatacat tggttattta ctgctaacga agtatcaaaa cttgtacctc ccatatccat
      121 ggtaatgcaa ttatcatatc ctaataaatc ggcataatat gcacctgcga ttggagctgc
      181 ggcagggcct gaaaggactg ttactgcagc gatctttgtt gcaatctctg gagttacaac
      241 tcctccattt gattgcatga tcattagctt tcctttgaaa ttgagttttt caagtttagc
      301 aattaatgat gctaaataag atccaacaac aacacttata tatgcattta caacagtagt
      361 gctcactctt tcgtaaaacc taactgaagg cagtacttcg tatgaagctg atataaacgt
      421 cttaggtaac ttttttctta aatattcagt agctagtttt tcattctctt tattcaaata
      481 agagttcata aaacagatag caactgcttg tacttcttcc tcattaattt ttgtaataat
      541 tttatctaat tcagaatagt taagactact caaaatattt ccttcagcat ctattctttc
      601 atcaattgta tatcttaaat atcgtggtac taacggtgta acatttttat atcggttatt
      661 atatctctcc tcgcgtacac ctcttctcat ttctaaagca tctctgaatc ctttagttgt
      721 aattagtgct gttttggcac cacctaatgt taataatgca tttgtagcaa cagtagttcc
      781 atgaacaata gtatcaatgt tgtcaataaa ttctgtatca ggtaaactta acttattggc
      841 aatttccttc aacccagaaa tgaatcctat ggaagaatct tctggcgtag aaagtgtttt
      901 atgcataata gaatcaccat tatccgctac taaaaagaag tcggtaaagg ttcctcctac
      961 atcgatgcca attttatatt tcatctatat tgtgaatact ctaatatata ctcgtgctaa
     1021 tatttttttg ttaattaaac tgtttcagag caatacatgc agcaccaaat gcattaatta
     1081 attgcggatt tggtgggata gttacctgaa tattaaattt ctcttcaata acatttttca
     1141 aaaaagggtg atattcagct actccaccaa taagaaaaac aggcaatgaa ttatctgctg
     1201 ggattttctg tattctgtta gcaatcgata tataaatacc tttagctaaa tcttcatcag
     1261 aagtatcatc gaaaatccat ttcattattt cagttttggc aaaaactgta caaaaactgt
     1321 ttaattcttt attagacgtt gaattagccg caagtttgct catttcgctt acattcaatt
     1381 ctgctctttc tgcaacttca gttatgaatg caccggtacc tgctgcacat ttactattca
     1441 aataaaactc gatgaccttt ccattactac cacttttaag taatttaaag tcctctcccc
     1501 ctatgtctat aatggttttt tctattggag aaatttgagt tatacctgca gacgcgcaat
     1561 atagttcggt tttaataata tcggctgttt tcaataattt tctgccatat cctgttgaac
     1621 atgtattaga tatattatag tcactatata tcttactgat tatttcatct ctcctgttat
     1681 tacgagccat ggttctaaaa atatcgctat aaataacttc aaactcagaa tttataacaa
     1741 ctaattttgt atacaacgac ccaatatcaa cgcctaaaaa aaacattagc ttgagtttta
     1801 ttctttatcc aaaaaggaat cttttgaatg gttctctatt aaattcttat gagtaatagc
     1861 tttta
//
LOCUS       DASCQP010000486         2315 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001759095, whole genome shotgun sequence.
ACCESSION   DASCQP010000486 DASCQP010000000
VERSION     DASCQP010000486.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2315)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2315)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2315
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001759095"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1135
                     /gene="sprA"
                     /locus_tag="QF480_08315"
     CDS             <1..1135
                     /gene="sprA"
                     /locus_tag="QF480_08315"
                     /inference="COORDINATES: protein motif:HMM:TIGR04189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cell surface protein SprA"
                     /protein_id="HJN06605.1"
                     /translation="INADILGAIRIDIDGDRIYASNYRSYFRSTSSDFDNPNFEEFTP
                     MDGGNFSISYSIIKTSFSKTDTSDVSETFVKFLDSRREIAYRLANENKSWDHEEVYDS
                     LAGELFPKGYTSSSQTVLYYSFLSAYSGQSSSDIKIDDPFPKFPIPNWRITFGGLTKI
                     KTIEKLFRTVNITHGYRSMLSISSWATNVNFDPENANQTFPNSDNYITRYDVGIVSVM
                     EQYSPLIGVDVTMHNSLSAKIEYKKSRKLDLSFVNNQLTEVVGAEVVVGMGYRIKNLK
                     FTIGSMSGGGKKKNFKSDLNLKIDFGIRDNKTTLRRIDEVNNQISAGAKQYTLNFAGD
                     YMLSQSIQLKLYYNWTSNNPYVSSQMPNATTSGGFSLRFNLAQ"
     gene            1231..1611
                     /gene="gcvH"
                     /locus_tag="QF480_08320"
     CDS             1231..1611
                     /gene="gcvH"
                     /locus_tag="QF480_08320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007564194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HJN06606.1"
                     /translation="MNIPENLFYTEDHEWIKVDGDYAIIGITDYAQKELGDIVFIEIE
                     TLDEELDRGESFGTIEAVKTVSDLFMPMAGKVVELNENLESDPEVINNDPYGEGWIIK
                     LKITNSSQLDELLDHSAYSKNIGD"
     gene            1604..2002
                     /locus_tag="QF480_08325"
     CDS             1604..2002
                     /locus_tag="QF480_08325"
                     /inference="COORDINATES: protein motif:HMM:NF016763.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VanZ family protein"
                     /protein_id="HJN06607.1"
                     /translation="MIKNLLIWKLLPALVWAIMILFLTGMPGTYFPKVATFWEWLSPD
                     KLIHIFIFGVQSFLVLTAFRVQYLLSSSRLVYTSIIVSVTILFALLTEILQVYVFIGR
                     DGNIYDFIADVAGIMVGLLAYNLLHKKKES"
     gene            2069..>2315
                     /locus_tag="QF480_08330"
     CDS             2069..>2315
                     /locus_tag="QF480_08330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HJN06608.1"
                     /translation="MEARKTPKADLEKKKGYFFEIGLIVALLIVFGAFEYKSYDKITI
                     DLASRDIDDTPEEIIPITEQKVKPPPPPPPKQVTKITI"
BASE COUNT          804 a          336 c          422 g          753 t
ORIGIN      
        1 aattaatgct gatatattag gcgcgattag gattgatata gatggcgaca ggatatatgc
       61 aagtaattac aggtcatact tcagaagtac ttcttccgat tttgacaatc caaatttcga
      121 ggaatttaca cctatggatg gtggaaactt cagtatatca tattcaataa ttaagacatc
      181 attttcaaag accgatacat cagacgtttc agaaacattt gttaaatttt tggattcaag
      241 aagagaaatt gcttataggt tagcaaatga aaataagtca tgggatcatg aagaagtata
      301 tgacagcctt gctggcgaac ttttcccaaa aggttatact tcaagctcac aaacagtact
      361 ttattattca ttcttgtcag cctattcagg gcaaagttct tctgatatta agatcgatga
      421 tcctttcccc aagttcccaa taccaaactg gcgaattaca tttggtggtc ttacgaaaat
      481 taaaactatt gaaaaacttt tcaggaccgt taatattact catggatacc gctcgatgtt
      541 aagcatttca tcttgggcaa ccaacgttaa cttcgatcca gaaaatgcta atcaaacgtt
      601 tcctaactct gataattata tcacaagata tgatgttgga attgtttctg tcatggagca
      661 atatagccct ctgataggag ttgacgtaac aatgcataat agtttatcgg ctaaaatcga
      721 atacaaaaaa tcacgcaaac ttgatttaag ttttgttaac aatcagttaa cagaagtagt
      781 tggtgcagag gttgttgttg gcatgggtta tagaatcaaa aaccttaaat ttacgattgg
      841 ctcaatgagt ggcggtggca aaaagaaaaa ctttaaaagc gatttaaatc taaagattga
      901 tttcggtatc agagataata aaacaacact aaggcgaata gatgaagtta ataaccagat
      961 ttcagcaggt gctaaacaat acacattaaa ttttgcaggc gattatatgt tgagccagag
     1021 tattcaatta aaattgtatt ataattggac aagcaataat ccttatgtat catctcaaat
     1081 gccaaatgcg actacaagcg gtggttttag tttaaggttt aatttagcac aataatagat
     1141 atcttttttt cttaaaaaaa ctatcaaact aatttatatg ggctcaaaaa taaattaatt
     1201 ttgatgcgat tttaattaaa cctttaaata atgaacattc ctgaaaattt attttatact
     1261 gaggaccatg agtggattaa agttgatggt gattatgcta ttataggtat tactgattat
     1321 gctcagaaag agctaggtga cattgttttt atagagattg agacccttga tgaagaactg
     1381 gacaggggtg aatcatttgg gacaattgaa gctgtcaaaa ctgtgtctga tttgtttatg
     1441 cctatggcag gtaaggtagt tgagttaaat gagaatcttg agtcagaccc tgaagtcatt
     1501 aataatgatc catacggtga gggatggata ataaaactaa aaattacaaa tagttcacag
     1561 ctagatgaat tattagacca tagtgcatat tccaagaata ttggtgatta agaatttatt
     1621 gatatggaag ttgttgcctg cattggtttg ggcaataatg atattattcc taacaggtat
     1681 gcctggtaca tatttcccta aagttgcaac cttctgggaa tggctttctc ctgataaatt
     1741 aattcatatt ttcatttttg gagtgcagtc gtttttagtg ttaactgctt ttagagtgca
     1801 atatttgttg agttccagtc gtttagttta tacatcaata atagtatcag taacaatatt
     1861 atttgcatta ttaaccgaaa tattacaagt atatgtgttt attggacgag atggaaatat
     1921 atatgatttt atagcagatg tagctggaat aatggttgga ttattggcat ataatttgct
     1981 tcataaaaag aaagaaagtt aaattaacat cgattaatag tttttattat tttagccgag
     2041 ttaaactatt aatcataaac ttattaaaat ggaagctaga aaaacaccta aagctgacct
     2101 tgaaaaaaag aaaggttact tctttgaaat aggactgata gttgctttat taatagtttt
     2161 tggtgccttt gagtacaaaa gttacgataa aataacaatc gatcttgcat ctcgcgatat
     2221 tgatgatact cctgaggaga taataccaat taccgagcaa aaagttaagc cacctccacc
     2281 tccgcctcca aagcaagtta caaaaatcac tattg
//
LOCUS       DASCQP010000487         2927 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001764280, whole genome shotgun sequence.
ACCESSION   DASCQP010000487 DASCQP010000000
VERSION     DASCQP010000487.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2927)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2927)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2927
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001764280"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..2232)
                     /locus_tag="QF480_08335"
     CDS             complement(<1..2232)
                     /locus_tag="QF480_08335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06609.1"
                     /translation="MNLFKSILTFCVSVFILSNVGLAQNSTATSGDNSTPEWVIMMQD
                     QNVNFYDVQKSANNYYETHPKGKGSGWKQFKRWEYFTEQRVYPSGDRINHAQVWNEIT
                     KFRKEYPQGNRGNRSGWTSLGPTTSAVVTGHWNPGIGRINVIAREPGDPQTIYIGSPS
                     GGLWKTTDEGANWIPLTDNQPVLGVSAIVIDPTSTNMVYIGTGDKDASDNYSIGVLKS
                     TDGGTTWNTTGLDWTIYQNRTIAKLIINPNNPNIIFAATTNGLYRTTDAGDNWIKILS
                     GDIDDLEFKPGDPNTIYASTRKFYKSVDGGDNFTETTGVSNTSRVQIAVTEANPSYVY
                     FFSSSTGIYRSEDSGDSFTFRSSQPTNGNQAWYDLAMAVSHTDAEEVHLGEFNTWKST
                     NGALTWSLTTDWTWGNPIGYTHCDIHEIVFYGGTLYVGSDGLICKSTDGGDTWANLTE
                     GVSIRQFYRIGTSKNDAYKIMGGSQDNGTSVYTTDHWHEWLGADGMECVPDYTNSDIV
                     YGTSQNGHFYKSNNGGNQGNVGIAQPGGGNWVTPFVIHPTDPQTLYVGSSEVKKTTNG
                     MGSWTTISNLNMGNLNNLSISESDGDYLYTSKGSSIYKTTNGGASWASISNGLPNLTI
                     SYIAIHPEDPEIIAVSLSGYTDGEKVYISDNAGSSWTNYSSNLPNIPANCVAYGSGSL
                     NPLYVGMDVGVYYIDDNLNEWDSYMEDLPNVIVTELEIQFDSQLIRAGTYGRGLWETS
                     IELY"
     gene            2358..>2927
                     /locus_tag="QF480_08340"
     CDS             2358..>2927
                     /locus_tag="QF480_08340"
                     /EC_number="3.4.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009136521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016805 - dipeptidase activity [Evidence
                     IEA];
                     GO_function: GO:0070004 - cysteine-type exopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C69 family dipeptidase"
                     /protein_id="HJN06610.1"
                     /translation="MVRKIFLVLIITSLVYQPIANACTIIVVGKKASSDGSNIISHTD
                     TGPDSRIFVVPAQTFKPGTKAPVYWGIQDADRPLNDDGIILGYIPQVEQTFKYFQSAY
                     SHLNEYQLGIGESTTAQRNELKCTRENGKQIMTIEQAQIFALQRYKTAREAVQFIGDL
                     MIKYGFLPSSGDGSETLVIADTEEIWVFEV"
BASE COUNT          876 a          576 c          507 g          968 t
ORIGIN      
        1 gtacaactca atacttgttt cccataatcc tctcccatat gttccggccc gtatcaattg
       61 tgaatcaaac tgtatttcca attctgttac aatcacatta ggtagatcct ccatgtatga
      121 atcccattca tttagattat catcgatata gtaaacacca acgtccatac caacgtataa
      181 cgggtttagg cttccgcttc cataagcaac acaatttgca ggaatattcg ggagattaga
      241 tgaataattt gtccaggagc tcccagcatt atctgaaata taaacttttt caccatcagt
      301 gtagccagac aaacttacgg caataatttc tggatcttca ggatgaattg caatatatga
      361 tatagttaag tttggtaacc catttgaaat acttgcccaa cttgcgccac cattcgttgt
      421 tttgtaaatc gatgagcctt tggaagtata aagatagtca ccatctgatt ccgaaatcga
      481 gaggttattc aaatttccca tatttaaatt agatattgtt gtccagctac ccatcccatt
      541 ggtagttttt ttaacttctg aagaaccaac ataaagtgtt tgagggtcag ttgggtgaat
      601 aacaaaaggc gttacccagt tacctccacc gggttgtgca ataccaacat ttccctgatt
      661 cccaccatta ttggatttgt aaaaatgacc attttgggag gttccataga cgatatcact
      721 atttgtataa tctggcacac attccattcc gtcggctcca agccattcat gccaatgatc
      781 agtggtataa acactagttc cattatcttg tgacccgccc ataattttat aggcgtcatt
      841 ttttgatgtt cctattctgt aaaactgtct aattgaaacc ccttcggtaa gatttgccca
      901 tgtgtcacct ccatcagttg atttgcaaat aagtccatca ctacctacgt aaagagttcc
      961 accatagaaa actatttcat gaatatcgca atgagtatat ccaataggat ttccccatgt
     1021 ccaatctgta gtcaagctcc atgttagtgc accattcgtt gatttccatg tgttgaattc
     1081 tccaagatgt acttcttcag catctgtgtg agagacagcc attgccaaat cataccaagc
     1141 ctgattacca tttgttggct gtgatgacct gaatgtaaag gaatcaccac tatcttctga
     1201 tctgtagatt cctgtactgg aagagaaaaa gtagacatag cttggattag cttcagttac
     1261 agcaatttgc acacggctag tatttgaaac accagtagtt tctgtaaagt tgtctcctcc
     1321 atccactgat ttataaaatt ttcttgtgga tgcataaatt gtgttcggat caccaggttt
     1381 aaattctaaa tcatcaatat ctccagaaag aatctttatc cagttgtcac ctgcatctgt
     1441 ggttctatat aaaccattag tagttgctgc aaaaattata ttcggattat ttgggttgat
     1501 aattagcttg gctatagttc gattttgata aattgtccag tctaatccgg tagtattcca
     1561 tgttgtacct ccatctgtag attttaacac accaatacta tagttatcag atgcatcttt
     1621 atcacctgtt ccgatataaa ccatgtttgt gcttgttggg tctatcacaa ttgctgacac
     1681 tcctaataca ggttgattat cagttagagg tatccaattt gctccttcat cagtggtttt
     1741 ccataatcca cctgaaggag agcctatata aatagtttga ggatcgccag gctcgcgagc
     1801 aataacattt attctaccaa ttcccggatt ccagtgacca gttacaactg ctgaagtagt
     1861 tggtcctaag ctagtccatc cactacgatt tccacgattt ccctggggat attctttcct
     1921 aaattttgtg atctcattcc atacctgtgc atggttaatt ctgtcaccgg atggatacac
     1981 gcgttgttca gtaaaatatt cccagcgttt gaattgtttc caaccacttc cttttccttt
     2041 tggatgtgtc tcgtaataat tatttgctga tttctgaacg tcataaaaat taacgttttg
     2101 atcttgcatc attataaccc attcaggtgt tgagttatca ccagacgttg ctgtcgaatt
     2161 ttgtgcaagc cctacattag ataatataaa aaccgaaaca caaaatgtta aaattgattt
     2221 gaataaattc atgattaatt atatattgat ttggaatatt ttgcgtaaaa gtaatagttt
     2281 tatttatacc tacatgaaca taaaaaaatg gtgctatttt tgttaattct taaaaattga
     2341 ttcaaaacaa aaaggacatg gtacgaaaaa tatttttagt gctgattatt acttcattag
     2401 tttatcaacc tatcgctaat gcatgcacta taatagttgt tggcaagaaa gcatcttcag
     2461 atggttcaaa tattatttct catactgata cggggcctga ttcaaggata tttgtagttc
     2521 ctgctcaaac atttaaacct ggtacaaagg cacctgttta ttggggaatt caggatgcag
     2581 acagaccttt aaatgatgac ggaattatac tcggttatat tcctcaggtt gaacaaacat
     2641 tcaaatattt ccaatcggca tattcacatt tgaatgaata tcagcttggt atcggtgaaa
     2701 gtaccacagc tcaaagaaat gagcttaaat gtacccgtga gaatggaaaa caaattatga
     2761 caattgaaca ggcacagata tttgccttgc aacgttataa aactgccaga gaagctgttc
     2821 aatttattgg agatttaatg ataaaatacg gttttttacc gtcaagcgga gatggctccg
     2881 aaacgcttgt tatagctgat acggaagaaa tatgggtttt tgaggtt
//
LOCUS       DASCQP010000488         4334 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001764488, whole genome shotgun sequence.
ACCESSION   DASCQP010000488 DASCQP010000000
VERSION     DASCQP010000488.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4334)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4334)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4334
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001764488"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..342
                     /locus_tag="QF480_08345"
     CDS             <1..342
                     /locus_tag="QF480_08345"
                     /inference="COORDINATES: protein motif:HMM:NF013225.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HJN06611.1"
                     /translation="GMAGRAYNPRLLFMWPNAKISVMGGGQAANVLVTVKQDQYRAMG
                     KEMPPEEIEKMRNPILEKYEREGSAYYSTSRLWDDGILDPVNTRKVIAMGIASSLNQK
                     FPEQKFGVFRM"
     gene            410..1201
                     /locus_tag="QF480_08350"
     CDS             410..1201
                     /locus_tag="QF480_08350"
                     /inference="COORDINATES: protein motif:HMM:NF012596.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HJN06612.1"
                     /translation="MRKNFKTILYEQMEGVAWISLNRPEVHNAMNEEMIAELTDAFLS
                     FNELKDIRAVVLTGNGKSFCAGADINYMKRIATLGTNENVEDAKKLALMFRSVYNCPI
                     PTIALIFGSVFGGANGILSACDIVIAEENTTFAFTEVKLGIAPATIAPFVIKRIGEFG
                     AKELMLTGKRFKAKEAKKWNLVNHVYNNEKEENPLDEILKQFESSAPEAVKETKKLIK
                     EILGKDINEGIDYTSKLIAKLRASEEGQEGMAAFLEKRKPNWTTE"
     gene            1209..3197
                     /locus_tag="QF480_08355"
     CDS             1209..3197
                     /locus_tag="QF480_08355"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF006367.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HJN06613.1"
                     /translation="MKKFKKILIANRGEIAVRIIKSANKLDIGTVAIYSEVDSDSLHV
                     RMADEAYCIGKQELSDTYLNIEKIIDLAKKTGCDGLHPGYGFLAESPTLVEACNSASI
                     TFIGPNTHSITLMGNKIEARKFVKELGVPMTQGITGDTDTLLKNVSSISFPILVKAAA
                     GGGGKGMRIVYDPKDLKDILESTSREALNYFGDGTIYIEKYIEEPRHIEFQVIGDNYG
                     NVIHLFERECTIQRRYQKIIEESPSPTLTPEVRKEMGKSAVDIACKVGYNSVGTIEFL
                     VDKDLNYYFLEMNTRIQVEHPVTEMVTGVDLVEEQILVAAGNKLRIKQKDIVQNGHAI
                     ECRIYAEDPTNNFAPSPGNITLLAFPEGQNIRIDTAIDKATTIQSFFDPMISKLIVWG
                     PNRQKAIDDSISALKNFIIHGIKTNISYLINVLKHDAFAKNQLSTKFCDEHTNDIIRS
                     IQHAKEKIDEKIPLVALALFTLNIIDTKAEKSIWEVIGYWREVMQLSFITKDKVEILE
                     LEDVQGNNYSFNYKDNKFFTKLIARNKDSVEFKIGKNSYYASISTDHHGNSFVSIDGS
                     LFSLRRSDILNSGDGFFESQSSGEGSLFAPTPGKVIKVNVKEGDEVTRGTILLIVEAM
                     KMENNIVATHNSIIEKVAVKEGDMVDSDVQLVVLEEIQ"
     gene            3281..>4334
                     /locus_tag="QF480_08360"
     CDS             3281..>4334
                     /locus_tag="QF480_08360"
                     /inference="COORDINATES: protein motif:HMM:NF012656.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJN06614.1"
                     /translation="MNFELTEEQQLIRETVRDFAEREIKPVAKELDEKAEFSHDLTKK
                     IGEIGLFGINIPEQYGGQGLDTLSYIIAVEEIARVDGSQAATLAAHNSLGIGPLIDYG
                     SEKQKMKYLPQLCTGNALWSFGLTEAGAGSDSRGSKTTAELDGDTWIINGSKIFITNA
                     SVDISMGCTVQAVSGEKNGKKIFTTIIVEKDTPGFKRVPMHGKMMWRASDTAELFFDN
                     VKVPKENILGKVGEGSHIMLHTLDGGRLSIGAMGLGLAQGAFEMALAYANERKQFGKP
                     ISKFQVNAFKLADMALKIELARNLLYKACWLKDEGKPYTKEAAMSKLYCSEIAKQVAD
                     EAVQIHGGYGLMKDYDI"
BASE COUNT         1518 a          660 c          921 g         1235 t
ORIGIN      
        1 ggaatggcag gaagggcata taatccaaga ctattattca tgtggccaaa tgcaaaaatc
       61 tcagttatgg gaggggggca agctgcaaat gttttggtta cagttaaaca agaccaatac
      121 agggcaatgg gtaaagaaat gcctcctgaa gaaatcgaga aaatgcgtaa ccctatattg
      181 gaaaaatatg aaagagaagg atcggcgtat tacagtacat cacgactttg ggatgatggc
      241 atattagacc ctgttaacac ccgtaaagtt attgctatgg gaatcgcctc ttcactaaat
      301 caaaaattcc ctgaacagaa atttggagta ttcagaatgt aatggttaat agtgatcaat
      361 gaattgtgaa tagtttcgag catgatcttt taaattccaa ttttaacaaa tgagaaaaaa
      421 ctttaaaaca attttatatg agcaaatgga aggtgttgca tggatttcac tcaaccgacc
      481 tgaagttcac aatgctatga atgaagaaat gatagctgag ttaaccgacg cgtttctttc
      541 atttaatgaa ttgaaagata taagagcagt tgtgttaacc ggaaacggga aatcattttg
      601 tgccggagcc gacattaatt acatgaaaag gattgccaca ttgggaacta atgaaaatgt
      661 ggaagatgca aaaaaacttg cacttatgtt taggtcagtt tataattgtc cgataccaac
      721 aattgcttta atttttggtt cagtttttgg cggggcaaat ggaatacttt ctgcttgtga
      781 tattgttatt gccgaagaaa atacaacttt tgcttttaca gaagttaaat taggaattgc
      841 accagcaact atagctcctt ttgtaattaa gaggattggc gagtttggtg caaaagaatt
      901 gatgttgaca ggtaaacgat ttaaagcaaa ggaagctaaa aaatggaatc ttgtcaacca
      961 tgtttataac aacgaaaaag aagagaaccc actggatgaa atacttaagc agtttgaaag
     1021 cagcgcaccc gaagctgtta aagaaactaa aaaattaata aaagagatcc ttggaaaaga
     1081 tataaacgaa ggaattgatt atacaagtaa actgatcgct aaacttcgtg cctctgaaga
     1141 aggacaagaa ggaatggctg cttttcttga aaagagaaaa ccaaattgga caacagaatg
     1201 atcttataat gaaaaaattc aaaaagatat taatagctaa tcgtggtgaa attgctgtaa
     1261 ggataatcaa atccgcaaat aaacttgata ttggaactgt tgccatttat tcggaggtgg
     1321 atagtgattc gttacatgtg cgaatggcag atgaggcgta ttgcattgga aaacaagagc
     1381 taagtgacac ctatctcaat attgaaaaga ttattgatct tgccaagaaa acaggttgtg
     1441 acggacttca tcccggatat ggatttttag cagaaagtcc aacgttggtt gaagcatgca
     1501 atagtgcgag tattacattt atcggtccca atactcattc aattaccctg atgggcaata
     1561 aaattgaagc ccgtaaattt gtgaaagagt taggtgttcc aatgactcaa ggtattaccg
     1621 gagatactga tactttgttg aaaaatgtca gttctattag tttccctatc cttgttaaag
     1681 ctgctgccgg tggtggcggg aaaggcatgc gtattgttta tgatcctaaa gaccttaaag
     1741 atatacttga atcaacatct cgtgaagcct taaattattt tggtgatggt acaatttata
     1801 ttgagaaata tatagaagaa ccgcggcata ttgaatttca ggtaattggt gataattatg
     1861 gaaacgttat tcatttattt gagagggaat gcactatcca gcgtcgttat cagaaaatta
     1921 tcgaagaatc tccttctcca acacttactc ccgaagtacg taaagaaatg ggtaagtcag
     1981 ctgtggatat tgcctgtaag gttgggtata atagtgttgg tacaattgag tttttagttg
     2041 ataaggacct aaattattat ttcctggaga tgaacacacg aatccaggtt gagcatcctg
     2101 tcactgagat ggtaacggga gtcgatttag ttgaggaaca aattctggtg gctgcaggta
     2161 acaaattacg tataaaacaa aaagacattg ttcaaaatgg acatgcaata gaatgtcgta
     2221 tatatgccga agaccctaca aataattttg caccttcacc tggtaatata acattacttg
     2281 cctttcctga aggacaaaat atcagaattg acactgccat cgacaaggca actacaattc
     2341 aaagtttctt cgacccaatg atcagtaaat taattgtttg gggcccgaac agacaaaagg
     2401 ctatcgatga tagcattagt gctttaaaga actttattat acacggaatc aaaacaaata
     2461 tttcatattt gattaatgta ttgaaacatg atgcatttgc caaaaaccaa ttatcgacaa
     2521 aattttgtga tgaacatact aatgatatta ttagaagtat tcaacatgct aaagaaaaga
     2581 ttgatgaaaa aataccgtta gtcgctttgg cccttttcac acttaatatt attgatacta
     2641 aagccgaaaa gagtatttgg gaagttattg gttattggcg agaggtaatg caactgagtt
     2701 ttataaccaa agataaagtt gaaatattgg aattggaaga tgttcaagga aacaattata
     2761 gtttcaatta caaagacaat aaatttttta caaagctgat tgcaagaaat aaagattcag
     2821 tagaatttaa aattggcaaa aattcttact acgcaagtat atcaactgat catcatggaa
     2881 atagctttgt tagtattgat ggatcattat tttccttaag aagatcagat attctgaaca
     2941 gtggagatgg tttttttgaa agccaaagta gtggcgaggg aagcctcttc gctcctactc
     3001 ctggtaaagt tataaaggta aacgtaaagg aaggtgacga agttacccgc ggtacaattc
     3061 ttttaattgt tgaggctatg aaaatggaga ataatattgt ggctacacat aactctataa
     3121 ttgaaaaagt tgctgtaaaa gaaggtgata tggttgactc agatgttcag ttggttgttc
     3181 tcgaagaaat ccaataatat taaagatagt gacataggtt tttactaact tgcgagttca
     3241 aaaaaatctg gacaacttaa aaaatataat acagtaaata atgaattttg aattaaccga
     3301 agaacagcaa ttaatccgag aaacagtacg cgattttgcc gaacgtgaaa ttaaaccagt
     3361 agcaaaagaa ctagatgaaa aagctgaatt ctcacatgat ctgacaaaaa aaataggtga
     3421 aattggattg tttggcataa atattcccga gcaatatggc ggacaggggc ttgatacatt
     3481 atcatatata atagctgttg aggagattgc ccgggttgat ggatcacaag ctgcaacact
     3541 tgctgcgcat aactctctgg ggataggtcc attaatcgat tatggttccg aaaagcagaa
     3601 aatgaaatac ctgcctcagt tatgtaccgg caatgctctt tggagttttg gtctaactga
     3661 agcaggtgct ggttccgact caagaggaag taaaacaaca gcggaacttg atggtgacac
     3721 ttggatcatt aatggctcga agatctttat aacaaacgca tctgttgata tatcaatggg
     3781 gtgtacagtt caggctgtgt ccggtgaaaa aaatggtaaa aaaatattta caacaattat
     3841 agttgagaag gacactcccg gtttcaaacg cgtcccaatg cacggaaaaa tgatgtggag
     3901 agcatcagat actgctgaat tattttttga taatgtaaag gttcctaagg aaaatattct
     3961 aggtaaagtt ggtgaaggat cgcacataat gcttcatacg ctggatggtg gccgactctc
     4021 aattggggct atgggacttg gattagctca aggtgcattt gagatggcac ttgcatatgc
     4081 aaatgagcgt aaacaatttg gaaagccgat ctcaaaattt caggtaaatg cttttaagct
     4141 agccgatatg gcgcttaaaa ttgaacttgc ccgaaactta ctatataagg cttgctggct
     4201 taaagatgaa gggaaaccgt ataccaaaga agctgcaatg tcgaaattat attgctccga
     4261 gattgccaaa caagttgccg atgaggccgt gcaaattcat ggaggttatg gtttaatgaa
     4321 agattacgat atcg
//
LOCUS       DASCQP010000489         7376 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001768346, whole genome shotgun sequence.
ACCESSION   DASCQP010000489 DASCQP010000000
VERSION     DASCQP010000489.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 7376)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7376)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7376
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001768346"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..749
                     /locus_tag="QF480_08365"
     CDS             <1..749
                     /locus_tag="QF480_08365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006800172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HJN06615.1"
                     /translation="PLGYTPETAKDLPTIINPHGGPWARDGWGFNPEIQFLANRGYAI
                     FQMNFRGSTGYGKKFWEASFKKWGQEMQDDITDGTNWLIKKGIADPDKIAIYGASYGG
                     YATLMGLVKEPELYAAGVDYVGVSNMFTFMKTIPPYWEPLLAMMYEMVGNPTTDSIMM
                     REISPVFHVDKIVSPLFIAQGANDPRVNIDESDQIVEAMKKRGVLVEYMVKDNEGHGF
                     HNEENRFDFYRSMEAFLAQQLADEKETAKN"
     gene            complement(901..2874)
                     /locus_tag="QF480_08370"
     CDS             complement(901..2874)
                     /locus_tag="QF480_08370"
                     /inference="COORDINATES: protein motif:HMM:NF013592.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family aminopeptidase"
                     /protein_id="HJN06616.1"
                     /translation="MKRIATLFIFLVYSIFAGAQWNKDSNIDKKCSHFKSLTDKMSFD
                     PDYYWQSEYLFDYDVTSYLLDIEVSDTTTYVAGNVIINCVALVALDTFAFELIEQQQI
                     DSIIFNGTVYTNYTRNDGNVLVPVNEVPEGTPISTQIFYHGKPPTGGFFSGVTTDYSP
                     GWQKHVTWTLSEPFAAKSWFPVKQVLQDKADSAWVFLTTPSTNKVGSQGLLTNVVDLG
                     NGKLKYEWKTAYPIDYYLISFAVADYLDYSIYAHPIEMEGDSLLIQNYIYNNPENLAM
                     KKEDLDNTAEIMELYCDLFTLYPFHKEKYGHCETQLGGGMEHQTMSTMGNFSFHLVAH
                     ELGHMWFGDNVTCATWSDIWINEGFATYSDCLAHEFILGKEAGKMFIQYAQNHAMSVS
                     NGSIYIPVDEIYPGNEWRIFSGRLSYDKGASIIHMLRHEIQNDELFFDVLKTFQINFG
                     GGTATGENFKETAEEITGIDFDQFFDQWYYGQGYPIYNFKYWTDDQHIFYLSSSQSTS
                     SMHTTLYDMLLDFRLHFADGSDTLVQFRQTDNLNVFSMECDQKVTFVEADPEQWTLEE
                     VANISSIGELEMNLPNFIIGPNPVVDKLHVYFLNTDSISRKIRIINLAGQQIFLGETT
                     DNIFKFNTANLGSGVYFVSVSHGKKTITKKFII"
     gene            3118..6432
                     /locus_tag="QF480_08375"
     CDS             3118..6432
                     /locus_tag="QF480_08375"
                     /inference="COORDINATES: protein motif:HMM:NF025152.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4175 family protein"
                     /protein_id="HJN06617.1"
                     /translation="MITAFEILISKLNKFIRKYYLNLIIKGVLLSFGLVIMLFLLVSV
                     FEYFSWSDIITRTVIFYLFVLSVLLILVYYIILPALKLIKLGKIISQEEAALIIGEHF
                     PEVNDKLLNTLQLHNHSSVSNMELLLASIEQKSASLNPVPFKNAVKYKKNLRYLKLIV
                     PPALLLLLILVISPGFVFEPADRIINHNTYFSKPLPYKIELLNKDFTCAQHENYSVKI
                     VVHGNEVPSKIWTTEGGFRYRMIEVKPGEFEYTFNDLVSDKYFSIVTDDFASDKYHLR
                     IYPQPVIFNFDVFIRYPKYLLLQNEKIENTGDLIVPEGSSITWAIFTRDTESVYFIAD
                     DSLFTLSASGTNVFKHSLVAMHDLNYTLVANNQFMQSTDSMQFNVQVIADEYPFINVN
                     EFKDELNYGVVNFSGSVVDDHGFTTLYFYYRKDSVHEKEWNKIALDIQQSVTRQHFDY
                     MMIANNFDLMPGDGLSYYFEIRDNDAVNGFKRTKSELYYFKLPDALELEKKIENSSNE
                     IKSKLKESLDQVDELTRQIEETKLNLFGKKELSWMDKQLLEDLLKKEEGVKKQLEELK
                     KLNDDINELEDLLKKKLSPELLEKLKQLEDLFNELVNKDLEKLKENLEKDKINDFLEK
                     MKEQNEELKNDLEQNLELYKQLEYEKLIQESIDELNKLSEEQKNLSDQTVNKKFDKEK
                     SLENQDEVEKKFSDLMDKLDKASELNKELEEPYNVKTDTAMASEIDEQIDDAQKNIQK
                     GRKNKASDSQENAGNKMKEMADGLSLMMQGAMEARMGEDIEQVKNMLDNLLDISFAQE
                     LLIKDLQKITINDPKNDYIREQQKGLKDDFEILHDSLIALSKRQVTIQPFIVKESDKI
                     NKHIDRALSQLQDRNNGKASADQQYSMTSMNNLSLMLSESLEQMKQSMQMSSNQKGSG
                     KCKSPGKGNSPSMSEIMNQQKGLNKGLKGKTKKNGLDGKNGLNSRSEELARMAAAQGA
                     IRKMLQEFIEQLKGEGADGGALQKLAEDMKKSEDDIVNRRVSQETLERQKNIETRLLR
                     SQKALHEREKEKKRESKEGINRKTGNLNSKIEYKTTTDIKEEILITDPLEVSPYYRNL
                     LKEYLYKLERKNEDGK"
     gene            6422..6907
                     /locus_tag="QF480_08380"
     CDS             6422..6907
                     /locus_tag="QF480_08380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06618.1"
                     /translation="MVNNNQSVLVKLQPKSMRDIELFVDTICDQLFINDTYYGNILMA
                     ITELFNYLLENKHGDSLNITYNSDYKNIEISFQPVDTQAGNRLSDAIDFDEMIHKDSD
                     KNIFLIHSLVDKISLANKDTLSLGFDISALHNEIYNKRAALLTKYFTKQTSEKVQKEN
                     D"
     gene            6900..7319
                     /gene="ybeY"
                     /locus_tag="QF480_08385"
     CDS             6900..7319
                     /gene="ybeY"
                     /locus_tag="QF480_08385"
                     /inference="COORDINATES: protein motif:HMM:TIGR00043.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HJN06619.1"
                     /translation="MISYTYLLSYNIDNLNEPYYTNWLKTVISSEGKKTGNIQYVFCD
                     DSYLHELNKSFLNHDSFTDIITFSTTQNDDIISGEIYISLDRIDENTKMHSVSLDHEL
                     SRVIVHGVLHLIGYNDISSSEKKLMRSKEDYYLHLQR"
BASE COUNT         2565 a         1161 c         1355 g         2295 t
ORIGIN      
        1 tacctttggg gtatacgcca gaaactgcaa aagatctccc tacgattatc aaccctcatg
       61 gtggaccatg ggctcgtgat gggtggggtt ttaatccgga aatacaattt ttagcaaaca
      121 gaggatatgc tatttttcaa atgaacttca ggggctccac aggttatggt aaaaaattct
      181 gggaggcttc atttaaaaaa tggggacaag aaatgcaaga cgacattacc gatggtacta
      241 attggttaat taaaaagggt attgctgatc cagacaaaat agctatttat ggagcaagtt
      301 atggtggata tgctacccta atggggcttg ttaaggagcc tgaattatat gctgcaggtg
      361 ttgattatgt aggtgtttca aacatgttca cgtttatgaa aactattcct ccatattggg
      421 agcctttgct tgcaatgatg tatgagatgg taggcaaccc aacaacagac agtataatga
      481 tgcgcgaaat ttctcctgta tttcatgtag ataaaattgt ttcccctctt ttcattgctc
      541 agggagcgaa tgatcctcgg gttaatatcg atgaatcaga tcaaattgtt gaggccatga
      601 agaaacgtgg tgttctagta gaatatatgg ttaaagacaa tgaagggcac ggtttccata
      661 atgaagaaaa caggtttgat ttttatagat caatggaggc ctttttggcg caacaacttg
      721 ctgatgaaaa agaaactgct aaaaattaat tagcatattt ttagagagaa attttaacct
      781 gtatttcact ttgtatgggt atcaataaat aattgatggg gtttattaga ttaatctaaa
      841 aaccccatct tttttgtttt tatacgaacg gaatgccctg tttagatttg gccttttgat
      901 ttatataata aacttttttg taatagtttt cttgccgtga gaaactgaaa caaaatatac
      961 tccactccct aaattagctg tgttgaactt aaaaatattg tcggttgttt ctcctaaaaa
     1021 tatttgttgt ccggcaagat tgataattct aatctttcgc gatattgaat ctgtatttag
     1081 gaaataaaca tgtagtttat cgacaacagg gttgggtcca attataaagt ttggtaggtt
     1141 catttctaat tccccaatac ttgaaatgtt ggctacttct tccaatgtcc attgttctgg
     1201 atcagcttca acgaaagtaa ctttttgatc acactccatt gagaatacat tgagattatc
     1261 agtttgcctg aattgaacca gggtatcact accatcagca aaatgcaatc tgaaatcaag
     1321 taacatatca tatagtgttg tgtgcataga agaagttgat tgtgaagagc ttaaataaaa
     1381 tatgtgttgg tcgtctgtcc aatatttgaa gttataaata ggataaccct gtccataata
     1441 ccactgatca aaaaattgat cgaagtctat acctgttatt tcttcagcag tttccttaaa
     1501 gttttctcct gttgcggtgc ctccgccaaa atttatttga aatgttttaa gcacatcaaa
     1561 aaataactca tcattttgaa tttcgtgtct taacatatgg ataatggaag cacccttgtc
     1621 atacgaaagt ctacctgaga aaatacgcca ttcatttcct gggtatattt catctacagg
     1681 aatataaata cttccatttg aaacagacat tgcatgattt tgagcgtatt gaataaacat
     1741 ttttcctgcc tcttttccca gtataaattc atgagccaaa caatcggaat aggtggcaaa
     1801 tccttcgttt atccatatat cactccatgt tgcacacgta acattatcac caaaccacat
     1861 atgcccaagc tcatgagcta caagatgaaa actaaaattc cccatcgttg acattgtttg
     1921 gtgttccatc ccgccgccca gctgcgtttc acaatgacca tatttctctt tatgaaaagg
     1981 atataaagta aatagatcac agtaaagttc cattatttca gcggtattat ccagatcttc
     2041 ctttttcatt gcaaggtttt ccggattatt ataaatgtaa ttttgaatca atagcgaatc
     2101 gccttccatc tcgatgggat gagcataaat actataatcc agataatcag ctacagcaaa
     2161 agaaattaaa taataatcaa tcggataggc tgttttccat tcatatttta atttaccatt
     2221 gcctaaatca accacatttg taagcagtcc ttgtgaacca accttgtttg ttgatggggt
     2281 tgttaaaaaa acccaggccg agtctgcttt atcttgtaag acctgtttta ccggaaacca
     2341 ggattttgct gcaaagggtt ctgataatgt ccatgttaca tgtttttgcc agccgggtga
     2401 gtaatccgtt gttacacctg aaaagaaacc tcctgttggt ggttttccgt ggtagaaaat
     2461 ttgagtagaa atgggtgttc cttccggtac ttcattaaca ggaaccaaca cgttaccatc
     2521 attacgagta taattagtat atactgtacc gttgaagata atactatcaa tctgctgctg
     2581 ttcaataagt tcaaaagcaa atgtgtctaa cgcgacaaga gcaacacaat taattataac
     2641 atttccggca acatacgttg ttgtatcact tacttctatg tctaataaat atgatgtaac
     2701 gtcataatca aacaggtatt cactctgcca ataatagtcg gggtcaaaag acatcttatc
     2761 ggttaaagat ttgaagtgtg aacatttttt atcaatattt gagtctttgt tccattgagc
     2821 tccggcaaat attgaataaa caagaaaaat aaagagtgtt gcgattcgtt tcataatagt
     2881 gatatgcttg attaataatt aatgtgggtt aacagactat agattgtgtc atcctgttca
     2941 tgattatatt ttgtagctca ctgcttttgt ggttttcaca aaagtgtgca aagggataaa
     3001 aataattagc tgtaagtatg aagaagattg aaatcattga accctaagaa tttatatctt
     3061 tgtcaaatac aaatgtactt attataaaaa gacaaataag gaaagataaa agttgctatg
     3121 atcacagcat ttgaaatatt aatatcaaaa cttaataaat tcatacgtaa gtattatttg
     3181 aatttaatta ttaagggggt attgttgagt tttggccttg ttattatgct gtttttactt
     3241 gttagtgttt ttgaatattt ttcatggtct gatataatta ccagaactgt aattttttac
     3301 ttgtttgtac tatccgtcct tttgattctt gtttattata taattctccc tgctttaaag
     3361 ttgatcaaat taggcaagat tatttcacaa gaagaagctg cccttattat tggagagcat
     3421 tttccggaag ttaacgataa gctactaaat actttgcaat tgcataatca cagcagtgtt
     3481 tcaaatatgg aattattgtt agcaagtatt gagcaaaaat cagcaagcct taatcctgtt
     3541 ccattcaaaa atgctgttaa gtataaaaaa aatctgcgct atcttaagtt gatcgttcct
     3601 ccggcgctat tattattatt aatcctggta atttctccag ggtttgtatt tgagcctgcc
     3661 gaccgaatta taaatcataa tacatatttt agtaagcccc tgccatataa aattgagttg
     3721 ctaaacaaag attttacctg cgctcaacat gaaaattaca gcgtaaaaat tgtggttcac
     3781 ggcaatgaag tgccatcaaa aatatggact actgaaggtg ggtttcgcta ccggatgata
     3841 gaggttaagc caggagaatt tgaatatact tttaacgacc tggtttccga taaatatttt
     3901 tcaattgtaa ccgacgactt tgcaagtgat aagtatcatc tgagaatata cccacagcct
     3961 gtcatattca attttgatgt gtttataaga tatcccaaat atctattgtt acagaacgaa
     4021 aaaattgaaa ataccggcga tctaatagta cctgagggca gttcaattac atgggccata
     4081 tttactcgtg atactgagag tgtttatttt attgctgatg atagtttgtt tacattatcc
     4141 gcctccggaa ctaatgtttt taagcactcg cttgtggcaa tgcatgattt aaattacaca
     4201 ttagtggcaa ataatcaatt tatgcaaagc acagattcta tgcagtttaa tgttcaggtt
     4261 attgcagatg aatatccgtt tataaacgtt aatgaattta aagatgaatt gaattatggt
     4321 gtagttaatt ttagtggttc ggtggttgat gatcatggtt ttacaacact atacttttac
     4381 taccgcaagg atagtgtaca cgaaaaagag tggaataaaa ttgcgctgga tatacaacaa
     4441 tcggtaactc ggcaacattt tgattatatg atgattgcta ataatttcga tctcatgccc
     4501 ggggatggtc ttagctatta ttttgaaatc agggataatg atgctgtcaa cggttttaaa
     4561 cgaaccaaat ctgaattgta ttattttaaa ttgcccgatg ctttagaact ggaaaagaaa
     4621 attgaaaaca gttcgaacga aattaaatca aaactgaaag aatctcttga tcaggttgat
     4681 gaacttacta ggcaaattga agaaactaaa cttaatctgt tcgggaaaaa agagttaagc
     4741 tggatggaca aacagctgct tgaggatctt ctgaaaaagg aagaaggtgt aaaaaagcag
     4801 ctggaagaat taaagaaact caatgatgat attaacgagc tagaagatct tcttaagaaa
     4861 aaacttagtc ctgagcttct tgagaaatta aaacaattag aagatctgtt caatgagctc
     4921 gttaacaagg atcttgaaaa attaaaagag aatcttgaaa aggataaaat aaatgatttt
     4981 cttgaaaaaa tgaaagagca aaacgaggag ctcaaaaacg accttgagca aaatcttgaa
     5041 ttgtataaac agcttgaata tgaaaaactt attcaggagt cgattgacga gttaaacaag
     5101 ttgtcagaag agcaaaagaa tttatctgat caaacagtca acaagaaatt tgacaaggaa
     5161 aaatctcttg aaaatcaaga tgaagttgaa aagaagtttt ctgatttaat ggacaaactt
     5221 gataaggcca gtgagctcaa caaagagctt gaagagcctt ataatgtgaa aactgacacc
     5281 gctatggcga gcgaaattga tgagcaaatt gacgatgcac agaaaaatat tcaaaaaggc
     5341 agaaaaaaca aagcgtcaga tagtcaggaa aacgccggaa acaaaatgaa agaaatggct
     5401 gatgggctgt ctcttatgat gcaaggagca atggaggctc gtatgggaga agatattgaa
     5461 caagtaaaaa atatgcttga caacctgttg gatattagtt ttgctcagga attactgatt
     5521 aaagatcttc aaaagattac aataaatgat ccaaagaatg attacatccg agaacagcaa
     5581 aagggtctta aagatgattt tgaaatacta cacgattctt taatagccct tagcaagcgc
     5641 caggttacta tacagccctt tattgtaaaa gaatctgata aaataaataa acacatcgat
     5701 agggcgctgt cacagctcca ggatcgtaat aacggaaagg cttctgctga ccaacagtat
     5761 tccatgacct caatgaataa tctttctcta atgttgtcag aatctttaga gcaaatgaag
     5821 cagtctatgc aaatgtcaag caatcaaaaa gggagtggta agtgtaaaag tcctggcaag
     5881 ggtaattccc catctatgtc tgaaattatg aatcagcaaa aaggtcttaa taaagggctc
     5941 aagggtaaaa caaaaaagaa tggattagat ggaaaaaatg gactaaattc gagaagtgaa
     6001 gagcttgcaa gaatggctgc tgcacaaggt gcgataagaa aaatgctgca agaatttatt
     6061 gagcaattaa aaggcgaagg cgctgatggc ggtgctttac aaaagcttgc cgaagatatg
     6121 aaaaagtctg aagatgatat tgtaaaccga agagtttcac aagaaacctt agagcgtcaa
     6181 aaaaatattg aaacaagatt attgaggtca caaaaagcct tacacgaaag agaaaaggaa
     6241 aaaaaacgag aatcaaaaga gggtataaat cgtaaaactg gtaacctaaa tagcaaaatt
     6301 gagtataaaa caacaacgga tataaaagag gaaatcttaa ttaccgatcc gcttgaggtt
     6361 tctccgtatt acagaaacct gcttaaagaa tatttatata aactagaaag aaaaaacgaa
     6421 gatggtaaat aataatcaat cagttttggt taagcttcag cctaagtcga tgagagatat
     6481 tgaattattt gttgatacta tttgtgatca actatttatt aatgatacat attatggtaa
     6541 tattcttatg gctattactg aattgtttaa ttatttactc gaaaacaagc atggtgactc
     6601 actaaatatt acttataatt ccgattataa aaatattgag atctcttttc aacccgttga
     6661 cactcaggct ggtaacagat tgtcagatgc cattgatttt gatgagatga tacacaagga
     6721 tagcgataaa aatatatttc ttatacactc tcttgttgac aaaattagcc ttgccaataa
     6781 agacactctt tcactagggt ttgatataag tgcactccat aatgaaatat ataataaacg
     6841 ggctgcatta ctaacaaaat attttaccaa acaaaccagc gaaaaggttc aaaaagaaaa
     6901 tgattagtta tacttacctg ctgtcgtaca atattgataa tctaaacgag ccctattata
     6961 ctaactggct taaaaccgtt atttcttcag aaggaaaaaa aacaggaaat attcaatatg
     7021 ttttttgtga tgatagttat ctccatgaac taaataaatc ttttcttaat cacgattctt
     7081 ttacagatat cataactttt tcaacaacac aaaatgatga tattatttct ggagaaatat
     7141 atattagttt ggatcgtata gatgaaaata caaaaatgca ttctgtatca ttggaccatg
     7201 aattaagcag ggttattgtt catggtgttc ttcatcttat tggttataat gatatctctt
     7261 cctccgaaaa gaagctaatg cgaagtaaag aagattatta tttacatttg cagcgttaat
     7321 tttcccaatt gttccacgtg aaacaaaaaa gtatgtttga gcaatatgat atcata
//
LOCUS       DASCQP010000490         2371 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001772260, whole genome shotgun sequence.
ACCESSION   DASCQP010000490 DASCQP010000000
VERSION     DASCQP010000490.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2371)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2371)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2371
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001772260"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..476)
                     /locus_tag="QF480_08390"
     CDS             complement(<1..476)
                     /locus_tag="QF480_08390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06620.1"
                     /translation="MKKSKLIIIIFVVSSILLPKSGISQVRTNVEALLNFSREKAIEF
                     NEKRAQAEEYARQNDIPIIFENDKGVFFELQYISEEGVPMYYKTDNRNAAKTVSTDKV
                     YPGGGAGLSLDGTGITPREWDAGGIRLTHQEYGGRVVQGDNPSSTHWHSTHVAGTI"
     gene            complement(813..>2371)
                     /locus_tag="QF480_08395"
     CDS             complement(813..>2371)
                     /locus_tag="QF480_08395"
                     /inference="COORDINATES: protein motif:HMM:NF024974.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PKD domain-containing protein"
                     /protein_id="HJN06621.1"
                     /translation="DISFGGGEFIEFWRWDFGDIISGANNTSTLENPTHLYGPYDSTY
                     QVKLTVTNFNGCTDSVVQDVFKPPCLIADFKPTESACARFETFIIDSSYIFSHNTIIS
                     HWYWNFGDGTTYDYDTHRDSISHTYENAGEYIIQLILESTLSGVSYHDTTTGIITIYP
                     TPKSAFDVDNNCLNDTTRYYDITVEYGSPVVTWRWDFGDTSNPNDTSIIQNPSYLYAT
                     YGTYYTELKVMNQYGCRDSITKTIKIYKPPEAAFSFAETCMSYYTYFTDESIDDSSII
                     IRYSWDFGDSLTLDDTSNLQNPNFIYNETGKYIVQLQVADENNCNDKISNELEIFSRP
                     KSDFIIMDTLQQGQIYLNNASLDAISYYWDFDYDYGVSSTENNPTHQYDADGSYTIML
                     ISYNDFDCPDTTYKVYDLLFTNLFVPNAFVPSNSNPELRTFKPIGINLRSYRLEVHSA
                     WGNLVFESTRLENGAPAEGWDGTYKGEDLPTASYIWRISAVFKDGTLWKGTNNGDGNT
                     ATSGTVTLIR"
BASE COUNT          752 a          430 c          375 g          814 t
ORIGIN      
        1 attatagtac cagcaacatg agtagaatgc caatgggttg atgatggatt atctccttga
       61 acaacacgtc ctccatattc ctgatgtgtt aaacgaatac ctccagcatc ccattctcga
      121 ggtgttattc ctgtgccatc aagactaagc ccagctccac caccgggata tactttatca
      181 gtagaaactg ttttagcagc gttcctatta tctgttttgt aatacattgg aacaccctct
      241 tccgaaatat attgaagttc aaaaaagacc cctttatcat tttcaaaaat tatggggata
      301 tcattttgtc tcgcatattc ttctgcctga gccctctttt cattaaattc aattgctttc
      361 tctctggaaa aattcagtaa ggcctcaaca ttggttctta cttgactaat acctgatttt
      421 ggtagcagaa tactacttac tacaaaaatt ataataataa gtttagattt tttcattttt
      481 tagttagaat ttaaatgtta aaatttaatt ttacagttaa cagactttga tagcaattat
      541 ttttagataa taaacactaa caaacctgat atttatctac catagttttt actaatggta
      601 ataaatgaat taataatagt tattttgata ataatgccag caatggagat aattaccttt
      661 caccttaatt ttgcaaagtt aaaaatatta ttactgatat atatttaatt acaacatagg
      721 tgaaaataca tagatttaag atttagaagt ttttggggag atttatcatg attttacata
      781 aaattataat tgatgaaatt tttactaacc tactatctaa ttaaagtaac tgttccacta
      841 gtagccgtat tcccatctcc attgttggtt cctttccaaa gcgttccatc cttaaatact
      901 gcagatattc tccatatata acttgccgta ggaagatctt cacctttata ggtaccatcc
      961 catccttcgg caggggctcc attttctaat ctggtgcttt caaatactaa attaccccag
     1021 gcactgtgca cctccaatct ataactcctt agattaatac ctattggctt gaaagtccgt
     1081 agttctggat tagagtttga cggtacaaat gcattaggta caaacaagtt ggtgaatagg
     1141 agatcatata ccttgtaggt tgtatccggg cagtcaaaat cattatagga tattaacatt
     1201 atggtatagc tgccatcagc atcgtactga tgtgtaggat tattctctgt actgctcaca
     1261 ccataatcat aatcaaaatc ccagtagtag cttatggcat ctaaactagc attattcaaa
     1321 tatatctggc cttgctgtaa tgtatccatt attataaaat ctgatttagg ccttgagaaa
     1381 atttctagtt cattacttat tttatcatta caattatttt catcagcaac ctgtaattgt
     1441 acaatatatt tccctgtttc gttgtagata aaatttggat tctgcagatt agaagtatca
     1501 tctaaagtta gagagtctcc aaagtcccat gaatatctaa taataatgga gctgtcatct
     1561 atagattcat cagtgaagta ggtgtaataa ctcatgcacg tctccgcaaa actgaaggct
     1621 gcctctggtg gtttataaat ttttatagtt tttgtaatac tatctctaca accatattgg
     1681 ttcattacct ttaactctgt ataataagtg ccataagttg cataaagata ggatgggttt
     1741 tgaatgatag aggtatcgtt aggattactt gtatcgccaa agtcccaacg ccaagtaact
     1801 acaggcgatc catactcaac ggtaatgtca tagtatctcg tcgtatcatt taaacaatta
     1861 ttatctacat cgaatgcaga ttttggtgtt ggatagatcg taataattcc agttgtagta
     1921 tcgtgataag atacaccact aagtgttgat tcaagaatta gttggataat atactcaccc
     1981 gcattttcat aagtatggga aatcgaatcc ctatgagtat cataatcata agttgtacca
     2041 tcaccaaaat tccagtacca atgtgatatt atggtattat ggctaaaaat atatgatgaa
     2101 tctattataa atgtctcaaa acgtgcacat gctgattccg taggtttaaa gtcagctatt
     2161 aagcaaggag gtttaaatac atcctgtaca acagagtctg tacatccatt aaaattggtg
     2221 actgtcagtt ttacctgata ggttgagtca tatggtccgt acaagtgggt agggttctca
     2281 agagttgatg tgttatttgc ccctgagata atatctccaa agtcccatcg ccaaaactct
     2341 ataaactctc ctcctccaaa acttatatca g
//
LOCUS       DASCQP010000491         4855 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001773696, whole genome shotgun sequence.
ACCESSION   DASCQP010000491 DASCQP010000000
VERSION     DASCQP010000491.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4855)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4855)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4855
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001773696"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..2655
                     /locus_tag="QF480_08400"
     CDS             <1..2655
                     /locus_tag="QF480_08400"
                     /inference="COORDINATES: protein motif:HMM:NF024247.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HJN06622.1"
                     /translation="IKIEGNDLSSLTNGGTNAKVQASVLSLYDSERLQYPLKSGAKTS
                     WEIIDAEIIGKLQELSSNNESITILTSNIISPSTLSLLDDFVKKYPSAKIVYYDPISL
                     SAIPEANNISFNKKVIPSYQFDQAKTIVSFNADFLGTWLSPIEFTKQYVKNRKLKEGK
                     KDMSYHVHFESGMSLTGSNADRRISIKPSEELSVLLNIFNCLASKANKFANITTSELR
                     FDISEICERLISDKGSSLVISGSNNVDIQLTVNAINQLLNNYGQTIDLNTPVFVKKCD
                     DNELNEFVDDLNTEKIKGLILYNVNAVYDFADPNIIIEGIEKTNFSVAISQTLDETAS
                     IVDYVCPDSHYLESWNDAEPKEGYYSLAQPAIQKIFDTRQFQESLLRWSGSEESYYDF
                     IRKYWEENIYPEFSNIGDFDQFWTKSLQEGVTEYEKYKTQPQPKFISSSIAKISPSVV
                     IPSDDFEIILYDKISLGNGQHSNNPWLQELPDPISKICWDNYLSVSPSDAKNIGLEVG
                     DVVIINGNLEAPVFVQPGQAVGTFSLALGYGRLKAGKAGNNVGVNAYPLIKKSGPNFE
                     RWNTVSIKKTGKKHLLAQTQTHHSMEGREIVKELSLNEYSSDHDAQKDDQHNEDHAYN
                     TTLYKEFKYDGHHWAMAIDLNSCTGCSNCVLSCQAENNIPIVGKEEVSRVHEMHWLRI
                     DRYYTGDENNPKVVFQPMMCQHCDNAPCENVCPVLATTHSSEGLNQMTYNRCVGIRYC
                     ANNCPYKVRRFNWFDYTDVDAMKDNLHDPLGMTSDLKRMVLNPDVTVRAKGVIEKCSF
                     CSHRIQEKKLLAKLENRPLDDGEIVPACAQSCPGNAIVFGDLNDKTSEVAQLFKNNRK
                     YRVLEEIHTEPSIGYLTKISNNGKTNIV"
     gene            2673..4037
                     /gene="nrfD"
                     /locus_tag="QF480_08405"
     CDS             2673..4037
                     /gene="nrfD"
                     /locus_tag="QF480_08405"
                     /inference="COORDINATES: protein motif:HMM:NF015851.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NrfD/PsrC family molybdoenzyme membrane anchor
                     subunit"
                     /protein_id="HJN06623.1"
                     /translation="MYTSGLREPLIKGNKSYKKVTSDIIGAMTGRPGNLWYIGISVAV
                     IALLIGIITMYYTVWQGIGTWGLNRTIGWGWAITNFVWWIGIGHAGTFISAILLLFRQ
                     KWRTSINRAAEAMTIFAVMCAGLFPLIHMGRVWLGFYIFPYPTGRELWVNFNSPLLWD
                     VFAISTYLTVSLLFWYIGLIPDLVTLRDNLKSKLAKKIYGFFSFGWTGSAKDWVRYET
                     LCLILAGLAAPLVLSVHSIVSMDFATSVIPGWHSTIFPPYFVAGAIFSGFAMVLTLMI
                     ITRKALHLEDYITKVHIESMNKIIIAMGSIVGIAYISELFIAWYSGNEYEQYAFLNRA
                     TGPYWWAYFIMMSCNVISPQLLWFKKLRTSFVFTFILSIFINIGMWFERFVIVVTSLH
                     RDYLTSSWSMYYPTKIEVGIYLGTFGLFFTLFFLFIKYVPVIAIAEVKSVLKNFGGKK
                     IEKH"
     gene            4042..4584
                     /locus_tag="QF480_08410"
     CDS             4042..4584
                     /locus_tag="QF480_08410"
                     /inference="COORDINATES: protein motif:HMM:NF023249.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3341 domain-containing protein"
                     /protein_id="HJN06624.1"
                     /translation="MKDSYISVMFEDENELLDSIAAVQKDGIKIYDVYTPFHVHGLGE
                     ALKIKPTRIPIVAFISGAIGTISALLFQSWISVLDWPINIGGKPFFALPSFIPVTFEI
                     TVLFSAFGMIGAFFYKSKLFPGNKPKIHNDQITNDCFLMLLEFNKTEMTEDKKIALEK
                     LLYKHGAFDIEFVENLKDKE"
     gene            4585..>4855
                     /locus_tag="QF480_08415"
     CDS             4585..>4855
                     /locus_tag="QF480_08415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06625.1"
                     /translation="MAEQFKYLKKHRNFTFILLGVGLVIMIVGLFLNNWEAEIFWANI
                     LLNNYYFLCFALGSVVFIALHNLGFSGWQILIQRIPEALSSFLPFS"
BASE COUNT         1584 a          744 c          950 g         1577 t
ORIGIN      
        1 ataaagatcg aaggaaatga tttgtcatca ttaacaaatg ggggaaccaa cgctaaagta
       61 caagcatctg tattaagtct ttacgattct gagagactgc aatatccgct caaaagcggt
      121 gcgaaaactt cttgggaaat tattgacgct gaaataatag gtaagttgca ggaactctcc
      181 tccaataatg aatcaataac tattctaacg tctaacataa ttagcccttc aacacttagt
      241 ttattagatg attttgttaa aaaatatcct agtgcaaaga ttgtatatta tgatcctata
      301 tcattatctg ctattccaga agcgaataat atatctttta acaaaaaagt aattccatct
      361 tatcagtttg atcaagcaaa aactatagtt agctttaatg cagacttcct gggtacatgg
      421 ttgtcaccga ttgaattcac gaagcaatat gtaaaaaaca gaaaacttaa agagggcaaa
      481 aaggatatgt cttatcatgt ccattttgaa tcaggtatgt cgctaacagg tagtaatgcc
      541 gatagaagaa tttcaattaa gccatcggaa gaactttcag tactgttaaa tatattcaat
      601 tgtcttgctt cgaaagcaaa taagtttgct aatattacta cttctgaatt acgctttgat
      661 atttctgaga tttgtgagag gttaataagt gataaaggta gttcattagt gatttctgga
      721 tcaaataatg tagatattca actgactgta aacgcaataa accaattgtt aaataactat
      781 ggccaaacaa tagatttaaa cacaccagtt ttcgtaaaga aatgcgatga caacgaatta
      841 aatgagttcg tggatgactt gaatacggag aaaataaagg gactgattct ttataatgtc
      901 aatgcggttt acgattttgc agacccgaat ataattatcg aaggaattga gaaaaccaat
      961 ttttcagttg ctatttcaca aactttagat gaaacggctt cgattgtaga ttatgtatgt
     1021 cctgatagtc attaccttga atcatggaat gatgctgaac caaaagaggg gtattatagt
     1081 ttggctcagc cagctattca aaaaatattt gatactcgac agtttcaaga gagtttgctc
     1141 cggtggtccg gaagtgaaga aagctattat gattttatta gaaaatattg ggaagaaaat
     1201 atctatcctg agttttctaa tattggtgat tttgatcaat tttggaccaa aagcttacaa
     1261 gaaggtgtta cagaatatga aaaatataaa acacaaccac aaccaaaatt tattagttcc
     1321 tcaatagcaa aaatttcacc atctgtagtt attccttcgg atgactttga aatcatttta
     1381 tatgacaaaa tatctctagg aaatgggcaa cattctaata acccatggct gcaagaatta
     1441 ccggatccaa tctcaaagat atgctgggat aactacttgt cagtttcacc aagcgacgca
     1501 aaaaatattg gacttgaagt tggtgatgtt gtaattatta atggaaatct tgaggctccc
     1561 gtatttgtgc aacctgggca agctgttggt accttctccc tggctctagg atatggaaga
     1621 cttaaagctg gcaaagcggg taataatgtt ggcgtcaatg cttatccctt gattaaaaaa
     1681 agtggaccaa actttgaaag atggaacact gtatcaatta aaaagactgg gaaaaagcat
     1741 ttgttagccc aaacccaaac ccatcattct atggagggaa gggagatcgt taaagaatta
     1801 agtttgaatg aatattcaag tgatcatgat gctcaaaagg acgatcaaca taatgaagat
     1861 catgcctata acactacatt gtataaagaa tttaagtatg atggacatca ttgggcaatg
     1921 gcaattgacc tgaattcatg tacaggttgt agcaattgtg tgctgtcatg tcaggctgaa
     1981 aataatattc ctattgttgg taaagaagaa gtcagccgtg tgcatgagat gcattggcta
     2041 aggatagaca ggtattatac cggtgatgaa aataacccca aagtagtttt tcaaccaatg
     2101 atgtgtcagc attgtgacaa tgccccttgc gaaaacgtat gtcctgtttt ggcaacaacc
     2161 catagtagcg aaggattaaa ccaaatgact tataataggt gcgtaggaat caggtattgt
     2221 gcaaacaatt gcccatacaa agtaaggagg tttaactggt ttgattacac cgacgtagat
     2281 gcaatgaaag ataaccttca tgacccgctt ggtatgacgt ctgatttaaa aagaatggta
     2341 ttaaatcctg atgttactgt ccgtgcaaaa ggtgttattg aaaaatgttc tttttgttca
     2401 cataggatcc aagagaaaaa attattagcg aaattagaaa atagaccttt agatgatgga
     2461 gaaatagtac ctgcctgcgc acagtcatgt cctggtaatg ccattgtatt tggtgattta
     2521 aacgacaaaa ccagcgaggt ggcacagctt tttaaaaaca atcgcaaata tagggtgctg
     2581 gaggaaatac atacagaacc atctattggg tatttgacta aaataagtaa caatggaaaa
     2641 accaatattg tctgataaat ctatcataaa atatgtatac atcaggtctt agagagccat
     2701 taattaaagg caataaaagt tataaaaaag ttaccagcga tattattggg gcaatgactg
     2761 gcagacccgg taatttgtgg tatataggaa tttctgttgc tgttattgcg ttgttgatcg
     2821 gaattattac tatgtattat actgtatggc agggaattgg cacttgggga ttaaacagaa
     2881 caatcggatg gggatgggct ataacaaatt ttgtttggtg gattggtatt ggtcatgcag
     2941 gaacttttat ttcagccatt ctattgttgt tccgtcaaaa atggaggaca agcataaacc
     3001 gcgctgctga agccatgact attttcgcag ttatgtgtgc aggattattc ccattaattc
     3061 atatgggtag ggtttggctt ggattttata tttttccata tcctacaggc cgtgaattgt
     3121 gggtaaattt taattcgccc ctattgtggg atgtgtttgc tattagtaca taccttactg
     3181 tttcgttgtt attctggtat attggattaa taccagattt ggtaacttta cgtgacaatt
     3241 taaaatcaaa attagcaaaa aagatatatg gtttttttag ttttggttgg acaggttctg
     3301 ctaaggattg ggtaagatat gaaacgcttt gccttatatt ggcaggactt gctgctccgc
     3361 tggttttatc tgtacatagt atagtaagca tggattttgc tacctctgtt attccaggat
     3421 ggcactcaac tatttttcca ccctattttg ttgccggagc tatcttctca ggttttgcaa
     3481 tggtgctaac attaatgatt ataaccagga aagcattaca ccttgaagat tatattacaa
     3541 aagtgcatat cgaatcaatg aataaaatca taattgctat gggctctatt gttgggatag
     3601 catatatctc cgaactattc attgcatggt attctggtaa tgaatatgaa cagtatgctt
     3661 ttctaaacag ggctaccggg ccctactggt gggcatactt cataatgatg tcctgtaacg
     3721 ttatctcgcc acagttgtta tggtttaaaa agctcaggac aagttttgtt ttcactttta
     3781 tactttcaat ttttattaat ataggtatgt ggttcgagcg gtttgtaata gttgtaactt
     3841 ctctacatag ggattatctt acatctagtt ggtctatgta ttatcctaca aaaattgaag
     3901 ttggaatcta cctgggtacg tttggtttat ttttcacttt atttttctta tttattaaat
     3961 atgtacctgt aattgctatt gcagaggtaa aaagtgtttt aaaaaacttt ggaggaaaaa
     4021 aaattgaaaa gcactaataa aatgaaagat agttacatat cagtaatgtt tgaagatgaa
     4081 aacgagcttc ttgattctat agctgctgtt cagaaagatg gtataaaaat atacgatgtt
     4141 tatacacctt ttcatgttca tggtttgggt gaggccttga aaataaaacc cacaaggata
     4201 cccatcgttg ccttcattag tggagcaata ggaactattt cagcacttct ttttcaatca
     4261 tggataagcg ttcttgattg gcctataaat attggtggga aaccattctt cgctcttcct
     4321 tcttttattc ctgtaacgtt tgagatcact gtacttttct ccgcttttgg tatgattggc
     4381 gccttttttt ataagtccaa attatttcct ggtaacaaac ccaaaataca taatgaccaa
     4441 attactaacg attgcttctt gatgttgttg gaatttaaca aaaccgagat gacagaagat
     4501 aaaaaaatag cactagaaaa gttgctatat aaacatggtg cttttgatat tgaatttgtg
     4561 gagaatttaa aagataaaga ataaatggca gagcaattta aatatttgaa gaaacacaga
     4621 aattttacat ttatattact aggtgttggt ttagtaataa tgattgttgg attattccta
     4681 aacaattggg aggccgaaat attttgggcc aatatattat taaataacta ttattttctt
     4741 tgttttgcgt tgggatcggt tgtctttata gctcttcata atttaggttt ttctgggtgg
     4801 caaatactta tacaaagaat acctgaggca ttaagctctt tcttgccttt ttcag
//
LOCUS       DASCQP010000492         2661 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001774261, whole genome shotgun sequence.
ACCESSION   DASCQP010000492 DASCQP010000000
VERSION     DASCQP010000492.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2661)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2661)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2661
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001774261"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1879)
                     /locus_tag="QF480_08420"
     CDS             complement(<1..1879)
                     /locus_tag="QF480_08420"
                     /inference="COORDINATES: protein motif:HMM:NF013122.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HJN06626.1"
                     /translation="MGLKENNYYYSKKFIANMFLIFDTETTGLPQNWKAPLDDFDNWP
                     RLIQLAWQIHNNKGELVDVQSYLVVPDGFIIPRGSEKIHGISTERATKEGKPIEFVLK
                     EFNKALKIANTIAGHNIEFDNSIVGSEMLRAKIDTTLFEKNALDTKNVSTNHCALPGG
                     RGGNFKWPTLEELYLKLFNENFVAAHNAIADVQATARCFFELIRIGIVDANMLKIDTS
                     GVDEFINNNPDIIQSGSIEVSSFHEDEKKEDEISESENPKDEVVASDTPKSVFTHLHV
                     HTQFSVLDGLSDIDEMLSKAKDDGMEAVAITDHGYMYGAKKFYDAALRVDIKPIIGCE
                     MYVARRGISKKENKTDGSGWHLVLLAKNLAGYHNLIKLVSIASIDGFYYKPRVDKDLL
                     KQYSEGIIALTACLGGEISQKIVNDGELKAEEALQEYKDIFGDDLYLELQRHPTGDPE
                     MDKKVFDDQVYVNKALLKFGEKLGVKVVATNDSHFVNAEDAGAHDRLICIGTAKDLDD
                     PNRWLYTKQEWFKNQAEMHELFSDIPQALENTKEVADKIEVYDLNKEAIMPEFIIPDK
                     FSDADEYLKHITFIGAEERYPEITNDIRERIDFELETIKKMGFPDYFLIVWDFLVAAR
                     DM"
     gene            2251..>2661
                     /gene="ndk"
                     /locus_tag="QF480_08425"
     CDS             2251..>2661
                     /gene="ndk"
                     /locus_tag="QF480_08425"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002640621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004550 - nucleoside diphosphate kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HJN06627.1"
                     /translation="MSGNITFTMIKPKAVADGNMGNIITKIIEGGFGIKALKYTRLTK
                     EQAMKFYAVHSERPFYSDLVKFMTSGPIIAAILEKENAVEAYRKYIGATNPAEAEPGT
                     IRALYATSIEANAVHGSDSDENAVIEGNFFFSEFE"
BASE COUNT          833 a          517 c          408 g          903 t
ORIGIN      
        1 ccatatcgcg ggcagctact aaaaaatccc aaacaattaa aaaatagtcg gggaaaccca
       61 tcttttttat tgtttcgagt tcaaaatcaa ttcgttcgcg gatatcatta gtgatttccg
      121 gatatcgttc ctcagctcca atgaaagtaa tgtgtttcag atattcatca gcatcactaa
      181 atttatcagg gatgataaac tccggcatta tagcttcttt attaaggtca tacacctcaa
      241 ttttatctgc aacttccttc gtattttcca gtgcttgtgg aatatcgcta aagagttcat
      301 gcatttctgc ctggtttttg aaccattcct gcttagtata tagccaacga tttgggtcat
      361 ccaaatcctt tgctgtacct atgcaaatta gtctatcatg agctcctgca tcttctgcgt
      421 taacaaaatg tgaatcattt gttgctacaa cctttacacc aagtttctct ccaaacttta
      481 atagggcttt gttaacataa acctgatcat caaatacttt tttatccatt tccggatcac
      541 ctgttggatg acgctgtagc tccaaataga gatcatcacc aaaaatatcc ttatactcct
      601 gtaaagcttc ttctgccttt aactcaccgt cgtttacaat cttttgtgat atctcaccgc
      661 caagacaggc cgttaatgca ataattcctt ctgaatattg cttcagtaga tccttatcaa
      721 cacgcggttt ataataaaag ccatcaattg aagcaattga aaccaacttt attaaattat
      781 gataacccgc taaattcttt gcaagtaata caaggtgcca tcctgaacca tcagtcttat
      841 tttctttttt actgatacct ctgcgtgcaa catacatctc acatcctata attggcttta
      901 tatcaactct taatgcagca tcataaaact tttttgctcc atacatatac ccatgatcgg
      961 taatggcgac tgcttccatt ccatcatctt tcgccttact tagcatctca tcgatatctg
     1021 acaaaccatc gagtacagaa aattgagtgt gaacgtgtaa gtgtgtaaaa acactcttag
     1081 gagtatcgga tgctacaact tcgtccttag ggttttccga ctcagatatc tcatcttctt
     1141 tcttttcatc ttcatgaaat gagcttactt caatacttcc agattgaata atatcgggat
     1201 tattgttgat aaactcatct acgcctgaag tgtctatttt taacatgtta gcatcgacta
     1261 tacctatcct gataagttca aaaaaacaac gggcagtggc ctgaacatca gctattgcat
     1321 tatgagctgc tacaaagttt tcgttaaata gttttaaata aagctcttct aatgttggcc
     1381 atttaaaatt acctcctctt ccaccaggta atgcacagtg attagtacta acgttttttg
     1441 tatctagcgc attcttctca aataaagtag tgtcaatttt agccctaagc atctcagacc
     1501 caacgatact attatcaaat tcaatattat ggccagcaat tgtattagct attttaagag
     1561 ctttattgaa ttctttaagt acaaattcga tcggttttcc ctctttagtg gctctttccg
     1621 ttgatattcc atgaattttt tcagatcctc ggggtataat aaaaccatcc ggtactacca
     1681 aataactttg aacatcaaca agttcacctt tattattatg gatttgccat gctaattgaa
     1741 ttaatcgtgg ccaattatca aaatcgtcaa gaggagcttt ccagttttgt ggtaaaccag
     1801 tagtttctgt gtcaaaaatc aggaacatat ttgcaataaa ttttttagaa taataatagt
     1861 tgttttcttt taaacccacg cttattttta ccaatatata ttagccatta ccaatgaaaa
     1921 actttaaatt aatcagcaag aacgcttgat tttgttataa acctggtaat gtgctcatta
     1981 gaaattacgc atgagtattg caaagttatt aaaatgataa tggcattatt atagtgttaa
     2041 taactttgga tattttctat taataatctc aaaagttcta gcaccaagtt acttaattac
     2101 gaatgccaat acatgtatca gagtggtcat gattagcctt tttaaaagct aaacagaatc
     2161 caaaaggaga ataggctaaa ttccattaca attttagatg gaattcatgt attattttta
     2221 cttttgcccc gaaaattaaa actaactatg atgtctggaa atataacttt tacaatgatt
     2281 aaacccaaag ctgttgctga tggcaacatg ggaaatatta taactaaaat tattgaaggt
     2341 gggtttggaa ttaaagcctt aaaatacact aggttaacta aagaacaagc tatgaaattt
     2401 tatgcagttc atagtgaacg tcctttctat agcgatttgg ttaaatttat gacctccggt
     2461 cctattatag ccgcaatact tgaaaaggaa aacgctgttg aagcctaccg taaatatatt
     2521 ggagcaacta atcctgcaga agctgaacca ggaacaatac gtgctttgta tgctacttca
     2581 attgaggcaa acgcagtaca tggttctgat agtgatgaaa atgctgtaat agaaggtaat
     2641 ttcttctttt cagaatttga g
//
LOCUS       DASCQP010000493         4467 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001776438, whole genome shotgun sequence.
ACCESSION   DASCQP010000493 DASCQP010000000
VERSION     DASCQP010000493.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4467)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4467)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4467
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001776438"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(221..757)
                     /locus_tag="QF480_08430"
     CDS             complement(221..757)
                     /locus_tag="QF480_08430"
                     /inference="COORDINATES: protein motif:HMM:NF024865.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HJN06628.1"
                     /translation="MKNLLYLSLPILVIATIISVNSCDNKLQSMENLKTKNMRTEEVI
                     EANNKLYAGLNEMFMGNFEPLNKLWSHSDSITFMGPFGGYLKGWDEIGKNFKEVSEMK
                     LGGKIVCANMNVFAGNDVGYVTCVEQGTNIGPDGKLVNVNHRATNIFHLEDGIWRLVH
                     HHTDISLQHEQAFDMEIK"
     gene            complement(811..1224)
                     /locus_tag="QF480_08435"
     CDS             complement(811..1224)
                     /locus_tag="QF480_08435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06629.1"
                     /translation="MITENEIKNLGHDFWKIVKSGVHGSKAEHLFVNPGVLAPNGSWL
                     KLEAHQELHRSLCDEVHEWVGDLSIKVLSENPERVQVNGIVHWEATIKENGNRIVSEV
                     GEQWIIERGIDRKLRWTNYWSDSFTYAKGSAELVL"
     gene            complement(1310..2524)
                     /locus_tag="QF480_08440"
     CDS             complement(1310..2524)
                     /locus_tag="QF480_08440"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN06630.1"
                     /translation="MTSKLFLIFLLLCFGNSAYNQNNWEQVILSDSIDIKSLYFYEED
                     IYLATHNGVYYSNNNFQSINYIGLEEHSITQIIYTSNNELIAFAAGGEICKYLGNNNW
                     NIYQGFTLKATCVFESSFESLFYGAWGNMFKSQDFGVTWDTVWSGYNTEVITDIEETS
                     EGLLFAGSTSWGGTDPGGIYRSDNQGETWNQVGLGFLIVNSIEKNSDNKLFAGVYGFN
                     GGVYKAIDTLGTSWVNIYNTNALVNDMKINYCNTIFIGCAMEGYPGGVYCSYNDGETW
                     ADITGDLPFRHIDKVYISYNSHVYIIKYSSNLLYRTINPITEVPKLDFVDKFSIYPNP
                     SVSELIISLPDTESYDIKVTDINGRQVINYKTLGNVNKVKIDEIKRLKPGIYNITIIN
                     SKYLYSTIFIKL"
     gene            complement(2949..3035)
                     /locus_tag="QF480_08445"
     tRNA            complement(2949..3035)
                     /locus_tag="QF480_08445"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2999..3001),aa:Ser,seq:cga)
     gene            3165..4055
                     /locus_tag="QF480_08450"
     CDS             3165..4055
                     /locus_tag="QF480_08450"
                     /inference="COORDINATES: protein motif:HMM:NF013088.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HJN06631.1"
                     /translation="MNRIKSSGFCAELLLVLAAIVWGFAFVAQKAGMEDIGPMAFNGI
                     RFLLGSISLFPLIWYYDKKGNFVKQKSSKNKELWKAGFISGLVLFVAASVQQIGIVYT
                     TAGNAGFITSMYVILVPVFGLAFKQRVNMQTWIGVVIALIGLYFLSVSEGLVLVIGDL
                     LVFGSAFFWAAHVLLASYYAPKVNVIRLAAIQFGVTGILSLIISFFTESYGFENIYAA
                     AIPLLYGGLMSVGLGFTLQLVAQQKANPTHAAIILSTEAVFAAIGGWLILNEHLTTIE
                     TVGAGLMLTGVVLSQLKKKI"
     gene            complement(4089..>4467)
                     /locus_tag="QF480_08455"
     CDS             complement(4089..>4467)
                     /locus_tag="QF480_08455"
                     /inference="COORDINATES: protein motif:HMM:NF025425.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4251 domain-containing protein"
                     /protein_id="HJN06632.1"
                     /translation="FERVTSIRTGHAYVITKRLNFLYAFGDSCIIQIETPQYFSMNGL
                     GGITISGNMSNYKYKPPKNDKKPIFINFNVTHKSNPRPINISITVTKDGVASITFGTV
                     SSIYGTFLPASEADINIGVDMWK"
BASE COUNT         1407 a          786 c          696 g         1578 t
ORIGIN      
        1 attgatttcc cttcaaggtt accaagtaag tctgattcaa tagatttcaa ggatgtttta
       61 ccattttgga acccgtcgag gtcataaaat tcagatttta tatgtacatc tgttctatta
      121 ttccatgaat gacgatttat ttccaaatat tcatcttcca ttaccatttt agatataatt
      181 agtttgctta ctctgtggtt tgaattcgaa attatccttt ttactttatt tccatgtcaa
      241 atgcttgttc atgctgcaaa gatatgtctg tatgatgatg aaccagcctc catattccat
      301 cttctaagtg aaaaatattt gtggctctat gatttacatt tacaagtttt ccatcaggtc
      361 caatatttgt accttgttca acacaggtaa catatccaac atcattacca gcaaatacat
      421 tcatattggc acatacaatt ttgcctccta atttcatttc ggatacttct ttaaaatttt
      481 taccaatttc atcccaacct tttaagtatc ctccaaaagg tcccatgaaa gtaattgaat
      541 cagaatgtga ccaaagttta ttcaatggtt caaaattgcc cataaacatt tcgtttagtc
      601 cagcataaag tttattatta gcttcaataa cttcttcagt tctcatattt ttagttttta
      661 aattttccat tgattgtagc ttgttatcgc aggaattaac agaaataata gtagcaataa
      721 ccaatattgg taatgacaaa tataataaat ttttcataat atattcaata tttcaatcga
      781 attatcacat aattatttta aaaataaccg ctataaaaca agttctgctg atcctttggc
      841 atatgtaaaa gaatcagacc aataattggt ccatctaagt tttctgtcta tacccctttc
      901 aataatccat tgctcaccca cctcacttac tattctatta ccattttctt taattgttgc
      961 ctcccagtga acaattccat ttacctgtac gcgttctgga ttttctgaaa gaactttaat
     1021 tgataaatca cccacccatt cgtgtacttc atcgcaaagt gaacgatgta attcttgatg
     1081 tgcctcaagt tttagccatg atccattggg agcaagaact cccggattca caaataaatg
     1141 ttcggctttt gaaccatgaa caccactttt gacaattttc caaaagtcat gccctagatt
     1201 tttaatttca ttttcagtaa tcatagcttt agtttttgag gtttatgtaa atcacttatt
     1261 tcttgaatgt tgtaaataaa attaactttt tcataggttt gagttttagt tatagtttaa
     1321 taaatattgt tgagtataaa tattttgaat ttataatggt tatattatat atcccaggtt
     1381 tcaatctttt tatttcatca atttttactt tattcacatt tcccagagtt ttataattaa
     1441 ttacttgcct gccgtttata tcagtcacct ttatatcata agattctgta tcaggaaggc
     1501 taattattaa ttcagatact gatggatttg ggtatattga aaatttatct acaaaatcaa
     1561 gtttaggaac ttctgttatt ggattaattg ttctatataa taggtttgaa gaatatttaa
     1621 taatatatac atgactatta tagcttatgt atactttatc aatgtgcctg aaaggcaaat
     1681 cgccagtaat atccgcccat gtttcgccgt cgttatatga acaataaact ccaccagggt
     1741 atccttccat tgcgcaacca ataaaaattg tattacaata gtttattttc atgtcattga
     1801 ctaaagcatt tgtattataa atattcaccc acgatgtacc aagagtgtca attgctttgt
     1861 aaacccctcc attaaatcca taaacaccag caaacaactt gttgtcggaa tttttttcaa
     1921 ttgaatttac tataagaaat ccaagaccaa cctgattcca tgtttcacct tgattatctg
     1981 agcggtaaat gccaccggga tcagtccccc cccaagaggt tgagccggca aataataatc
     2041 cttcactggt ttcctctata tcggttataa cttccgtgtt gtagccactc caaactgtat
     2101 cccatgtaac cccaaaatct tgagatttaa acatgtttcc ccaagctcca taaaatagag
     2161 actcaaacga agattcaaaa acacaagttg cttttaatgt gaatccttga taaatattcc
     2221 aattattatt acctaagtat ttacaaatct ctccacctgc agcaaaggca attaattcat
     2281 tgttagatgt atatattatt tgtgtaatac tatgttcttc taatcctata taatttatag
     2341 attgaaaatt attattcgaa taataaactc cattatgggt ggctaaataa atgtcttcct
     2401 cgtagaagta caatgatttt atatctatag aatcggacaa aattacctgt tcccaattat
     2461 tctgattata agcagaattt ccgaaacaca ataacaaaaa gataaggaac aatttagaag
     2521 tcattttgaa cattttaagt tatttagttt ttaaaaaaat ctgagatcac aaagaatgta
     2581 tttgccaata ataaattgtt ttattgattt tattggttta atgtgctaat atacattgat
     2641 tttacgaaga atgaatataa attatggtaa cctatagtat tgatatgttg tacaatacta
     2701 ccctttcgag taggttttac actactcctc atctccttga ataaggagac actaatgtgc
     2761 tttaaatatg tatccctttt atttcagaga taagaacggt tcttatctat tatatagaac
     2821 ggtttacaag aatctaatac gctttttgtt tttgatgttt tttgcgcagt tttgcatagt
     2881 gccaaaaaac aaaacgccat aaaatcaaca ttttacggcg ttttgcgcat ttctgcatag
     2941 tctttcagcg gagggtaagg gattcgaacc cttggtgccc ctgaaggcac aacggttttc
     3001 gagaccgccc cgttcgacca ctccggcaac cctccggcgc aaaaataata aaatgtcacc
     3061 atgttaataa ttatcaacac tgattctggt tcttttgaca aatacgaatt caacactaaa
     3121 taatccactc caatttgttt atttttggac aatattgcct taaaatgaat agaataaaaa
     3181 gctcagggtt ttgcgcagaa ttattacttg tgctagctgc tatagtatgg ggatttgcat
     3241 ttgttgccca gaaggcagga atggaagata tcgggccaat ggcttttaat ggaattaggt
     3301 ttctgcttgg cagtatttca ctatttcctc ttatttggta ttacgataaa aaagggaatt
     3361 tcgttaagca aaaatcaagt aaaaacaaag aactatggaa agctgggttc atcagcgggc
     3421 ttgttttatt tgtagcggcc tcagtccaac aaataggtat tgtttataca acagcgggaa
     3481 atgcaggatt tataacaagc atgtatgtta tacttgttcc ggtatttggg ttagcattta
     3541 agcaaagagt aaatatgcaa acatggattg gagtagtaat agccctaatc gggttatatt
     3601 tcctgtcggt tagtgaggga ttggtccttg ttattggtga tctactggta tttggaagtg
     3661 ctttcttttg ggcagctcat gtactattag caagttatta tgcaccaaag gttaatgtaa
     3721 ttagacttgc agcaattcag tttggagtta ctgggattct tagcctcatt atttcgtttt
     3781 ttacagaatc ctacgggttc gagaatatct atgcagctgc aataccactt ttatatggag
     3841 gtttgatgtc ggtaggacta ggatttacac tacaattagt agctcaacaa aaagctaatc
     3901 ctactcatgc tgctattatt cttagtaccg aagcggtgtt tgctgcaata ggagggtggt
     3961 taattttgaa tgaacacctt acaaccatag aaacagtggg agcagggcta atgctcacag
     4021 gtgtagtgct atctcaattg aaaaagaaaa tttgaattaa gttttccagg tcttatttaa
     4081 tatctggact atttccacat atcaacacca atattaatat ctgcttcact agcaggtaag
     4141 aaagtaccgt aaatagatga aacagtgcca aacgtaattg atgccacacc atctttagta
     4201 acggtaatac ttatattaat tggcctgggg ttcgacttat gtgtaacatt aaaatttatg
     4261 aagatcggtt ttttatcgtt cttaggtggt ttatacttat agtttgacat atttccacta
     4321 atagttatgc ccccaagtcc attcatcgaa aaatactggg gtgtttcaat ctgaataatg
     4381 caagaatcac caaatgcata taaaaaattc agtctttttg ttataacata cgcatgacca
     4441 gttcttatgc tggtaactct ttcaaat
//
LOCUS       DASCQP010000494         1745 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001778109, whole genome shotgun sequence.
ACCESSION   DASCQP010000494 DASCQP010000000
VERSION     DASCQP010000494.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1745)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1745)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1745
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001778109"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            282..1676
                     /locus_tag="QF480_08460"
     CDS             282..1676
                     /locus_tag="QF480_08460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06633.1"
                     /translation="MAWEALLDLRINTAKELTKKEISLNPDNYYAYYVAQNCDAYELM
                     INATSEGYEAFKDNYYDRRENMDDKDVESPYYLACESEMQLQMGIFNIIFGDRLAGLR
                     RAFSAYKKIYKNLDRYPDFQMGNKLDGMLNVAISNLPPFVSWAANTFGVSGDAEVGYS
                     ILNTYFDYFGDTPGLNEEAVLYTILAHKLNKDPLGAYNFIKSIDSSYANYLLLKYFYA
                     NVAYQSGFNEEALNIFSTFNPNELEIQFNPYNYLYGKIMLRKLDSSAIMYFTKYLDQN
                     NKKDNLKEINYQLALAYLINGNIARFLEHKKFASELGDDITERDREAMYDYSLDYIPD
                     INLVKAKLLLDGGYNLHAKAILEKYSSEKIDYNSQSPYSLEYNLLIGRLEYQTNNNKL
                     AIISFEKVLDMGKDQDYYFASEAALYLGLIFEKTDPQKAISFFERARELYDSDYYEYI
                     DEISKKRIKILSSS"
BASE COUNT          611 a          268 c          316 g          550 t
ORIGIN      
        1 ttcaaattct atgctgttgg tgatggtctt agtactatct tcagacgctc tccaggaaaa
       61 ataacggcgg ccaggcctcc tgatagagat atagagcaat tagaatttgg cttcacttaa
      121 aaaatggggt aacttcaaat tcaaatgaac gataagataa aaaaaaacgt aaatttgaaa
      181 ataaaaaaat gacttgttgg cggttcataa ttacaattct cgtactagct gtatttcacc
      241 aaaacgcatc ggcgcaatac gaggttagca aaaactgcac catggcctgg gaagcattat
      301 tggatttaag aattaatact gccaaagaat taacaaaaaa agagataagt ctcaaccctg
      361 ataattatta tgcctattat gtagctcaaa attgtgatgc ttatgagtta atgataaatg
      421 caacttctga aggatatgaa gcctttaaag ataactatta tgatcgcaga gaaaatatgg
      481 atgataagga tgttgaatca ccttattatc ttgcttgtga atccgagatg cagcttcaaa
      541 tgggtatttt taatattatt tttggtgaca ggttagcggg cctcagacgg gcttttagtg
      601 cctataaaaa aatatataaa aatcttgatc ggtaccctga ttttcaaatg ggtaataaac
      661 tcgatggaat gcttaatgtg gcgatctcaa atcttccacc atttgttagc tgggctgcaa
      721 atactttcgg tgtttcagga gacgctgaag taggatacag tatcctgaac acatattttg
      781 attattttgg agatacaccc gggcttaatg aagaggcagt gttgtataca attctggcgc
      841 ataaactcaa caaagatcct cttggcgcat ataattttat aaaatcaata gattcaagtt
      901 atgccaatta tcttctcttg aagtattttt atgctaatgt agcttatcag tcgggtttta
      961 atgaagaagc attaaatata ttctcaactt ttaatcctaa tgaacttgaa attcaattta
     1021 acccttacaa ttatttatat ggcaaaatca tgcttagaaa gcttgattca tctgcaatta
     1081 tgtactttac taagtattta gatcaaaaca acaaaaagga taatttgaaa gagataaatt
     1141 atcagcttgc gttagcatat ttaattaacg gaaacatagc tagattcctt gaacacaaaa
     1201 aatttgccag tgaactgggt gatgatataa ccgaacgcga cagagaagca atgtatgatt
     1261 atagtctgga ttatattccc gacataaatc ttgtcaaggc aaagttactg ctggacggag
     1321 gttacaacct ccatgcaaag gcaatacttg agaagtatag ttctgaaaag attgattata
     1381 attctcaatc accatattct cttgaataca atttacttat aggcagactt gaatatcaaa
     1441 ctaataataa caagctcgca attatttctt ttgagaaggt acttgacatg ggtaaggatc
     1501 aggattatta ttttgcatct gaagcagctt tgtatcttgg attaatattt gaaaaaactg
     1561 atccacagaa ggcaatttct ttttttgaaa gggcacgcga actgtatgat tctgattact
     1621 atgaatatat tgatgaaata tctaaaaagc gcatcaaaat tttaagtagt tcatagaaat
     1681 gaatggatca aatacattaa tgttaaatca tggactgata atcaattttt tttcctggaa
     1741 gatag
//
LOCUS       DASCQP010000495         2456 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001778294, whole genome shotgun sequence.
ACCESSION   DASCQP010000495 DASCQP010000000
VERSION     DASCQP010000495.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2456)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2456)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2456
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001778294"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            241..741
                     /locus_tag="QF480_08465"
     CDS             241..741
                     /locus_tag="QF480_08465"
                     /inference="COORDINATES: protein motif:HMM:NF024865.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HJN06634.1"
                     /translation="MKILYSTFVLSILLLAGSCDYQNKENNNAADRESIENLLENYIL
                     ANENQDFDLIETIWAPDEDIILYGTDSDERLMGWSNIEGAIKEQFGYITDTYISASNQ
                     FIKLNCTGNTAWFAETLNYNYMYKGEAHSYEGLRFTGVVEKIEDSWVLVQAHLSVPAS
                     VGIGDK"
     gene            908..1828
                     /locus_tag="QF480_08470"
     CDS             908..1828
                     /locus_tag="QF480_08470"
                     /inference="COORDINATES: protein motif:HMM:NF024824.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HJN06635.1"
                     /translation="MQRIIILLIVVPFLFACDVNNSSNDETNENQNKVVATLTDSSAT
                     ITFTTDDFKTDSTILEVNPDEAKPVTGIVSKSGKTKVDRGTIEDEEEALKLRRARTQF
                     TNGITYYKDGDLDQAIEAFKLALEFKPDNDKVFYNLGRIYYDLGQKELSMSYYKDAVR
                     LNPSDSLSLVAIGLLYYEQGDFVEATKFYDSTIAVAQHFSMVYFNRGTMFGQQKMYQK
                     SLQDLNKAIEYDDKNSEAFINRGLAHYFLKQMDLACKDWHKAAAMGNPKGTRAVDIYC
                     SGVVKNKVNKVLIIITRLLFMIRQVSTLPI"
     gene            complement(1812..2045)
                     /gene="atpC"
                     /locus_tag="QF480_08475"
     CDS             complement(1812..2045)
                     /gene="atpC"
                     /locus_tag="QF480_08475"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F1 subunit epsilon"
                     /protein_id="HJN06636.1"
                     /translation="MNLEIITPDTTIYQGEAELIQLPGIDGSFEILNNHAPLISALKK
                     GKVKIKKSGKEEFFEINGGVIEVLENKVLILAE"
     gene            complement(2146..>2456)
                     /locus_tag="QF480_08480"
     CDS             complement(2146..>2456)
                     /locus_tag="QF480_08480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005676098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HJN06637.1"
                     /translation="ILQRYKELQDIIAILGMDELSEEDKLIVHRARRIQRFLSQPFHV
                     AEQFTGLQGVVVSIEDTIKGFNMILDGEVDEYPEAAFNLVGTIEEAIEKGKKLLAESK
                     "
BASE COUNT          832 a          418 c          425 g          781 t
ORIGIN      
        1 ttcaaattct atgctgttgg tgatggtctt agtactatct tcagacgctc tccaggaaaa
       61 ataacggcgg ccaggcctcc tgatagagat atagagcaat tagaatttgg cttcacttaa
      121 aaaatggggt aacttcaaaa aattatatac ttgactttca ttgataaaaa gcgtaatttc
      181 acaccattgg gttttatgaa caacaattct ttaaatttaa aagtttaaaa acatactgcc
      241 atgaaaattt tatattcaac atttgtgtta agcatactgc ttttagcggg ctcatgcgat
      301 tatcaaaata aggagaataa taatgcagca gacagggaat ccattgagaa tttgcttgaa
      361 aactatattc ttgcaaacga aaatcaagat tttgatctta ttgaaaccat ttgggcgcca
      421 gatgaagata tcatcttata tggtactgat tctgacgaaa ggttaatggg ttggtcaaac
      481 attgaaggcg caataaaaga gcaatttggt tacattactg atacctacat ctctgcctct
      541 aaccagttca taaaattaaa ctgtacgggt aacactgcct ggtttgccga aacgttaaat
      601 tataattata tgtacaaggg tgaggcacat agttatgaag gattaagatt tactggtgtt
      661 gttgaaaaaa ttgaagatag ttgggtattg gttcaagcac atttgtcagt gccagcatca
      721 gttggcattg gggataagta gctaggagca gatatctcaa atatctaatt caaatcattc
      781 accacaataa cccagtctcc aatccattat cctatatatt tctacccgtt tatgtatagg
      841 attacttatt aaccgattac tattaacaat taacaattat ctttgcacac ttaaaattat
      901 atgacatatg caaagaatta taattcttct tatagtagtc ccgtttttat ttgcttgcga
      961 tgtaaataat agttcaaatg acgaaacaaa tgaaaatcaa aacaaagtag tagctacctt
     1021 aactgatagt tcagcaacta tcacttttac taccgatgat tttaaaacag atagcacaat
     1081 acttgaagta aatcctgatg aagccaaacc agttactgga attgtttcga aatctggtaa
     1141 aacaaaggtc gatcgtggaa ccatagaaga tgaagaagaa gctctgaaat taagaagagc
     1201 acgcacccag tttactaacg gaataactta ttataaagat ggtgatcttg accaagccat
     1261 tgaagcattt aaacttgcac tggagtttaa gcctgataac gataaggtct tttataattt
     1321 aggacgtatt tattatgatc tgggacaaaa ggagctgtca atgtcgtact ataaagatgc
     1381 agtacgattg aatccaagtg attcattatc cttggtcgcg attgggctat tatactatga
     1441 acagggagat tttgtagagg ctacaaaatt ttatgatagt acaattgcag ttgcacaaca
     1501 tttcagtatg gtatatttta acaggggcac tatgtttggt caacaaaaaa tgtatcaaaa
     1561 gtcgttgcag gacctaaaca aggctataga atacgacgat aagaattcag aagcatttat
     1621 taacaggggg ctagctcatt atttcctaaa gcaaatggat cttgcatgta aagattggca
     1681 taaagctgca gctatgggaa acccaaaggg gacacgagct gttgatattt attgttcagg
     1741 agtagtaaaa aacaaagtaa ataaagtcct tataatcata acgcgtttat tgtttatgat
     1801 aagacaagtc tctactctgc caatataagc accttgtttt caagaacttc aataactcct
     1861 ccattaatct caaaaaactc ttccttacca ctctttttaa ttttaacttt tcccttcttc
     1921 agggctgata tcagtggagc atgattattc agaatttcaa acgaaccgtc gattcctggt
     1981 aattgaatca attcagcttc cccttgataa atggttgtgt ctggagtaat tatttcgaga
     2041 ttcattcttt atgtgttatc tgttatttgt tataagttaa acgttatatg aaaataggtt
     2101 agattaattg aaaccaacat ataattaata actattaacg tataactatt tgctctcagc
     2161 aagtaacttt ttgccttttt caatcgcttc ttcaattgtt ccaacaagat taaaggccgc
     2221 ttcaggatat tcatcaactt caccatcaag aatcatgttg aaccccttta tcgtgtcttc
     2281 aattgataca accacacctt gaaggcctgt aaattgttca gctacatgga aaggttgtga
     2341 taaaaatctc tgtattcttc ttgcacgatg aacaataagt ttgtcctctt ctgagagttc
     2401 atccatacca agaatagcaa taatatcctg caattcttta tatctctgaa gaatac
//
LOCUS       DASCQP010000496         2542 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001783018, whole genome shotgun sequence.
ACCESSION   DASCQP010000496 DASCQP010000000
VERSION     DASCQP010000496.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2542)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2542)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2542
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001783018"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            21..767
                     /locus_tag="QF480_08485"
     CDS             21..767
                     /locus_tag="QF480_08485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007483682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenyl transferase"
                     /protein_id="HJN06638.1"
                     /translation="MESSREKINLDKLPNHIAIIMDGNGRWALQHGLDRVGGHHKGVD
                     SVRDIAEAAADLGIKYLTLYTFSTENWSRPKDEVDALMSLFVETIVKELDTLNKNNIR
                     LSAIGDIKSLPEENYKMLTETMEKTSGNSRMTLTLAMCYSSRWEIIDAIKKLASDIES
                     SKLKSKDITEPLFESYLATNDIPDPELLIRTSGELRVSNYLLWQIAYSELYFTNVLWP
                     DFRKEELYKAIVDYQNRERRFGLTSEQLLS"
     gene            776..>2542
                     /locus_tag="QF480_08490"
     CDS             776..>2542
                     /locus_tag="QF480_08490"
                     /inference="COORDINATES: protein motif:HMM:NF018899.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="POTRA domain-containing protein"
                     /protein_id="HJN06639.1"
                     /translation="MRKTYRNVILLSIIISFVLFVGESYAQINIGNDLSKISYDAPTE
                     YVIGGIEVEGVEYLDKNVIIMLSNLEIGERIKIPGDEITSAIRKLWEQGLFDNISIVA
                     SDIKANKIFLKIILHERPRLSKFSFEGIRKTEADDIREKINLTRGDVVTDHLVIRTEN
                     IINQFYADKGYLNSEVSITEKQDKRNNNFVDLTINIKKNRKVKIKVINIYGTEKLSLD
                     AVKKSMKETKARGVFKPLDSLAPFIIDVTSNLLTLKFKDVHENFLNYYKDYFKINIFK
                     GSKYIESNYKEDLNNIIAKYNKRGYRDAQIIVDSVYKLNNENIAIDITIDEGNKYYFR
                     DITWVGNTVYSSLFLSSILGIRSGDVYNLELLETNLQYNPTGFDISSLYMNNGYLFFN
                     VTPVETYVGNDSIDLEIRIFEGKQARIKNVSVKGNTKTNDHVVIRELRTRPGQLFSRE
                     DVIRTTRELANLRYFDPESITPNINPDPLDGTVDIEYEVEETSADQIELSGGWGYGRI
                     IGTIGLSFNNFSLKNFFRASSWKPIPSGDGQKLSLRFQTYGKDYLSWSVSFTEPWLGG
                     RKPNALTVSYYHSIYSNGLPKSD"
BASE COUNT          898 a          359 c          487 g          798 t
ORIGIN      
        1 ggaaatgatt tttctgattg atggaaagca gtagagaaaa aataaactta gataaactac
       61 ccaatcatat tgcaatcata atggatggca atggcagatg ggcattacaa catggccttg
      121 atcgtgttgg tggtcatcat aagggtgttg attctgttag ggatattgct gaggcggcag
      181 ccgatttagg cattaagtat cttactcttt atactttctc aactgaaaac tggagcagac
      241 ccaaagatga agtagatgcc cttatgtcgt tgtttgttga aacaattgta aaagagttag
      301 atacattaaa taagaataac atacgcctaa gtgctattgg tgatattaaa agtttaccag
      361 aagagaatta taagatgctt actgaaacaa tggaaaaaac ctctggtaat agcagaatga
      421 cactaaccct tgcaatgtgc tatagttctc gatgggaaat tattgatgca attaaaaaat
      481 tagcctctga tattgaatcc agtaaactga aaagtaagga tataaccgaa cccttatttg
      541 aaagttattt agcaacgaat gatattcctg atccagaact gttaataagg actagcggcg
      601 aattaagagt aagcaactat ctactatggc aaatagcata ttccgagttg tattttacaa
      661 acgttctgtg gcccgatttt cgcaaagaag agctatataa ggctattgtt gattatcaga
      721 atagggagag aaggtttggt ttaacaagtg aacaattatt aagttgaatc gtactatgag
      781 gaaaacttat cggaatgtaa tattattatc aatcataata agttttgtgc tttttgttgg
      841 cgaatcctat gcacaaatta atattggcaa cgatttgtcg aagattagtt atgatgcacc
      901 taccgaatat gtaataggtg gtatagaagt agaaggtgtg gagtaccttg ataagaacgt
      961 aataataatg ctttctaatc ttgagattgg agaacggatc aaaataccag gtgatgaaat
     1021 tacaagcgca attaggaaat tatgggaaca aggtcttttt gataatatca gtatagtagc
     1081 ttctgatatt aaggccaata aaatattcct taaaattata ttacatgaac gccctaggct
     1141 gagtaagttt tcgtttgaag gtattcgaaa aactgaagct gatgatatcc gtgaaaaaat
     1201 taatcttaca cgtggtgatg tagtaactga tcacctcgtt atccgtacag aaaatataat
     1261 taatcagttt tacgccgata agggatatct gaacagcgaa gttagcataa cagagaaaca
     1321 ggataaacgt aataacaact ttgttgatct cactattaac attaagaaaa acaggaaagt
     1381 taaaataaag gtaattaata tttatggtac tgagaaactt tcattagatg cagttaaaaa
     1441 aagcatgaaa gaaaccaaag ctaggggcgt ttttaaaccg ttagatagtc ttgcaccttt
     1501 tataattgat gttacaagta atttgctaac tctcaaattt aaagatgtac atgaaaattt
     1561 tctaaattat tataaggatt actttaagat taatattttc aaaggttcaa aatatattga
     1621 atcgaattat aaagaagacc taaataatat tatcgcaaaa tataataaaa gaggttatcg
     1681 tgatgctcaa attattgttg attcagtata caagctcaat aatgagaata tagccattga
     1741 tattaccatt gatgaaggaa ataaatatta tttcagagat ataacctggg ttggaaatac
     1801 tgtttattcc tcattatttt taagttcaat acttggtatt cgttctggtg atgtttataa
     1861 ccttgaactt cttgaaacta atcttcaata caatcctact ggttttgata ttagttctct
     1921 ttacatgaat aatggttact tgttttttaa tgtaactcct gttgaaacat atgttgggaa
     1981 tgactctatt gatttggaaa tccgaatttt cgaaggaaaa caagcccgaa taaaaaatgt
     2041 atctgtaaaa ggcaatacta agactaacga tcatgttgtt attcgtgaat tacgtacaag
     2101 accaggccag ttgtttagtc gtgaagatgt tataagaaca acacgtgaat tagcgaattt
     2161 gagatacttt gatcccgaat caattacccc aaatataaat cctgatcctc ttgatggaac
     2221 tgtggatatc gaatacgaag tagaagaaac ttccgccgat caaattgaac tttctggggg
     2281 ttggggctat ggccgaataa ttggcaccat aggtttgagt tttaataatt tttcattaaa
     2341 aaattttttt agagcaagtt cgtggaaacc aatcccttct ggggatgggc agaaactctc
     2401 gttgcggttt caaacttacg gcaaggatta cttaagctgg agtgtttctt ttactgagcc
     2461 atggttggga ggaagaaaac caaatgcatt aacagtttca tattatcact caatttattc
     2521 aaatggatta ccaaaatcgg at
//
LOCUS       DASCQP010000497         4659 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001783063, whole genome shotgun sequence.
ACCESSION   DASCQP010000497 DASCQP010000000
VERSION     DASCQP010000497.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4659)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4659)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4659
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001783063"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(266..2095)
                     /locus_tag="QF480_08495"
     CDS             complement(266..2095)
                     /locus_tag="QF480_08495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06640.1"
                     /translation="MRIITRKYLLLYLTLLVVFAIVNFLSTDSDRKVFIDGDGSGHYA
                     YLPAIFIFHSVDFDEVLQFEKQRRPPDYMGHYFHKHGDVHINKYTIGTALLQLPFFLL
                     GFLISLLLGLTPDGYNIIFQYSVAFATLFWVGQGIIYFVKLLLTYGIDRKFAWAMATV
                     TLFGTNLFFYVFVQPSFSHTYSFTLITIFLYFCRKGFLNYEKRYMLLASFLMGLVILV
                     RPINIVIVASLPFIAGTPQLFFNTVKLKFKGYDYIPAVIILALTISPQLIINYLQTGG
                     LIIFGYKNEGFYFTEPQISNFLFSYRKGWFIYSPVFLLLLPAVIYQGWRKSIYAAISF
                     VIFFFILVYIFSSWWNWFYGDSFGMRPMVDYYGLFMLVIALFLFQIKMKWFRIIAAFF
                     ISIFLLLNLFQSYQYAVGIIHPDSMSKRSYWHVFLKMDKKFKNVISGSDESYYGRLSK
                     KPFFSSSNHIDNFDQGWTTSNSLNREISFSDSLSVIQTPINIYSPSLKFQISDTLIGY
                     NNIFVRFKSYYYELEQNASLKALFVVDINDTNGSSVFYKAFRVKQLPDNINQSWQEGS
                     IGFKLPEITENMAYIKFYIWNVKKQTYLLDDLTIQLSTYSPDN"
     gene            2256..3461
                     /locus_tag="QF480_08500"
     CDS             2256..3461
                     /locus_tag="QF480_08500"
                     /inference="COORDINATES: protein motif:HMM:NF013237.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HJN06641.1"
                     /translation="MKNKFDPATALQKIEQFGEFGGVNPSITDSATYTFLHENVMIDA
                     FQGEAEGCFLYSRHWNPSNKYLADALANMEGTEAAWVTASGMAAITTAILQICNTGDH
                     IITSVTTYGGTFAFLHNYVKKFNIEVSFVNISDHEGIKKAIKPNTKVIYTESMTNPML
                     QVSDIPAISKIAHEHGIKVLVDNTFTPMILSPFKLGADIVVYSMTKFINGKNDCVAGA
                     ICASEEFINDISNVNDGTAMLLGPVLDPLRSSSILKNLGTLHIRMVQHGKNAMFLAKK
                     FKEIGLKCNYPGISEHPQHELMNSMMNEGFGYSGIIAIDLETAERATPFMELMQEKGV
                     GYHAVSLGYFKTLFSNSGRSTSSEVPIETQKEMGLSPGLIRFSVGLDHDIERTFELIR
                     SCLEELGYL"
     gene            complement(3777..>4659)
                     /locus_tag="QF480_08505"
     CDS             complement(3777..>4659)
                     /locus_tag="QF480_08505"
                     /inference="COORDINATES: protein motif:HMM:NF015552.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tellurite resistance/C4-dicarboxylate
                     transporter family protein"
                     /protein_id="HJN06642.1"
                     /translation="VILWIMNILRIVIYPRRFLVDMSDHLRGVGFFTFVAATGVLAAQ
                     LIVISDDILSAKILWYLGAGLWLLFMYGIFFALTVKKVKPNLAEGINGGWLVAVVATQ
                     SLCIVGCLAPPELGIGKEGSLTIMLALWLCGGMLYIWLISLIFYRYTFFILQPSDLMP
                     PYWINMGAMAISTLAGSMLIQRASDSPLLLSILPFLKGFTLWYWATATWWIPLMVLLA
                     IWRHGIRRFPFSYDQGYWGVVFPLGMYTACTFQLGQAIDSSLISAIPLGFVYISVPVW
                     GVIFYGLLRRMVSILFD"
BASE COUNT         1670 a          834 c          797 g         1358 t
ORIGIN      
        1 gccatcatca gttttaatgt taacaagtct tgagtcgagt atcttagtta caacaccccc
       61 tcctacttcg tcaataaatt ttactttatc gcctaatttg aacttcatta atactgatat
      121 tagagcggca aaaatagtaa ataagacagg gtaattgtgt taaaaaagac aaattattta
      181 gccaatattc aaaataaagt agtgattatt aaaatagaac atttaatgac ttgtaataac
      241 tatatgaaga cgacaggaag ttagattaat tgtcaggact ataggtgctt aattgaatag
      301 ttaagtcatc taataagtac gtttgctttt taacattcca tatataaaac ttaatatatg
      361 ccatgttctc agttatttca gggagtttga atccgatact gccttcctgc cagctttgat
      421 taatattatc tggtaactgc tttacgcgaa atgccttgta gaaaacacta ctgccatttg
      481 tatcattaat atccacaaca aataatgcct ttagtgaagc attttgttcg agttcatagt
      541 aataagattt aaatctgaca aaaatattgt tataccctat aagcgtatcg cttatttgaa
      601 attttaaaga tggactataa atgttaattg gtgtttgaat aacagacaaa gaatctgaaa
      661 atgaaatttc ccggttcaaa ctatttgacg ttgtccagcc ttgatcaaaa ttgtcaatat
      721 gattagatga actaaaaaat ggtttttttg acaaacgacc atagtatgac tcatcactcc
      781 ctgagattac attcttaaat ttcttatcca tttttaggaa aacatgccaa tatgacctct
      841 tcgacatcga atcaggatga ataataccta ctgcatattg atacgactga aaaaggttta
      901 gtaaaagaaa tatagaaata aaaaatgctg caataattct aaaccatttc attttaattt
      961 ggaaaagaaa taaggcaata acgagcataa acaatccata ataatcaacc atgggcctca
     1021 tcccaaaact atctccgtag aaccaattcc accatgaaga gaaaatgtaa acaaggataa
     1081 aaaagaaaat tacgaatgat attgcagcat agatcgattt tcgccagcct tgataaatta
     1141 cagcaggtaa caacagcaaa aatacaggtg aataaataaa ccatcctttc cgataactaa
     1201 aaagaaaatt acttatttgt ggttctgtaa aataaaatcc ttcgttttta tacccaaaaa
     1261 taattagtcc tcctgtttga agataattga ttatcaattg cgggctaatt gtaagtgcaa
     1321 ggattataac tgcaggtatg tagtcgtaac ctttgaattt caacttaacc gtattgaaga
     1381 atagttgtgg agtacctgct ataaaaggta gggatgctac aataactata tttataggac
     1441 gtacaagtat aactaagccc attaaaaatg aagctaataa catatacctt ttctcataat
     1501 tcaaaaatcc ctttctacag aaatacagaa atattgtaat cagtgtaaag gagtatgtgt
     1561 gtgaaaacga tggctgaacg aacacataga aaaataagtt cgttccgaac aaagttactg
     1621 ttgccattgc ccaggcaaac tttcgatcta taccgtaagt aagtaataac ttcacgaaat
     1681 agataattcc ttgtccaacc caaaataaag ttgcaaatgc aacactatac tgaaatataa
     1741 tattataacc atcgggtgtt aaaccaagca gcaaactaat tagaaatcct aaaagaaaaa
     1801 agggaagttg taaaagagct gtaccaatgg tatatttatt tatatgaaca tcgccatgct
     1861 tatgaaaata atgacccata taatcagggg gtctcctttg cttttcaaat tgtaggactt
     1921 cgtcaaaatc aacactgtga aaaataaata tcgccggcaa atatgcataa tgtccacttc
     1981 cgtcaccatc tataaatact ttacgatcag aatcagtact cagaaaatta acgatagcga
     2041 aaacaactag taatgttaaa tagagcagta aatatttcct ggttattatt ctcacttatg
     2101 aaaaatattt ttaatgagcg aatttattaa attaaatcat attaaaagga agtttgtggg
     2161 tgagggttaa cggagcatta atttagaaag attctgtaaa atacaggtcg tttgtttact
     2221 aattttgcat cataaaaact aaccacagaa aaaagatgaa aaataaattc gatcctgcca
     2281 cagcgttgca aaaaatagaa caatttggag aattcggagg ggttaatcca tcaattacag
     2341 attcagcaac atatacattc cttcatgaaa atgttatgat tgatgcattt cagggtgaag
     2401 ccgaaggttg ttttttgtac tcacgccact ggaacccttc taacaaatac cttgctgatg
     2461 cacttgcaaa tatggaaggc acagaagctg cctgggtgac agcatctgga atggctgcaa
     2521 ttactacagc aattctccaa atttgtaata caggtgatca tattattacc agtgttacta
     2581 cttacggagg cacttttgca tttctgcaca actatgttaa aaagtttaat attgaggtat
     2641 catttgtaaa tatttccgac catgaaggca ttaagaaagc tataaaaccc aatactaagg
     2701 ttatttatac cgaaagcatg actaatccta tgcttcaggt gagtgatatt ccagcaatat
     2761 ctaagatcgc acatgagcat ggcataaaag ttctagttga taatactttt actccgatga
     2821 ttcttagccc attcaaactt ggtgccgaca tagtagttta tagtatgaca aaatttatta
     2881 atggcaaaaa tgattgtgtt gctggtgcta tttgcgcatc cgaagaattt attaacgaca
     2941 taagcaatgt gaatgacggg acagccatgt tacttggccc ggttctcgat cctttgcgct
     3001 catcatccat acttaaaaac cttggcacac tccacatacg gatggttcaa catggcaaaa
     3061 atgctatgtt ccttgcaaag aagtttaaag aaattgggtt aaaatgtaat tacccgggaa
     3121 tatcagaaca tccacagcat gaactcatga atagcatgat gaatgaagga tttggttata
     3181 gcggaataat tgccatcgac ctggaaactg ctgaaagagc aactccattt atggagctta
     3241 tgcaagaaaa gggggttggc tatcacgctg ttagtcttgg ttatttcaaa acattattct
     3301 ctaattcagg tagaagtact tcatcagaag tcccaattga gacacaaaag gaaatgggtc
     3361 tttcacctgg attaatcaga ttttcggtag gccttgacca tgatattgag cgtacctttg
     3421 aattaataag atcctgtcta gaagaactcg gttatctata gttagcgcag atattagatg
     3481 ctattacagt acttttcgat tacattaatt gtaaaagcct aatttcctct tctgaacatc
     3541 aattaatagc aatttcataa ttccaaaatt ttcgtttgaa attttactgc ctggtttttc
     3601 agttggattt tcgaaaatgt gaaatttcta caatgtctta catctgaatc tggcgacaaa
     3661 ttttatgctg agtagaattg ctatggacag acctgtatct tttcactcca tatagccaag
     3721 actaaatctt ccaactcaac tttcaaggaa attccttaaa tgcatcatcc aaaaatttaa
     3781 tcaaataaaa tggataccat tcgtcgcaga agtccataaa agattacgcc ccacactggt
     3841 acacttatat atacaaaacc aagaggaata gctgagatca aactagaatc aatggcttgt
     3901 cccagttgga aagtacaagc tgtgtacata ccaagcggga aaacaacccc ccagtaccct
     3961 tgatcatatg agaatgggaa ccttcttatt ccatgacgcc aaattgcaag aagtaccatg
     4021 agtggaatcc accaggtagc tgttgcccaa taccataaag tgaaaccttt taaaaatggt
     4081 agtattgaaa gcaatagagg agaatctgaa gcccgttgaa tgagcatcga tccagcaagt
     4141 gttgaaatag ccattgctcc catattaatc caatatggag gcatgagatc agagggctgt
     4201 aatataaaaa atgtatatcg gtagaaaata agcgagataa gccaaatata gagcatccct
     4261 ccacaaagcc agagagcaag catgattgta agggaaccct cttttccaat tccaagctcg
     4321 ggaggagcta ggcatccaac tatacataat gactgtgtag ctacaactgc tacaagccat
     4381 ccaccattga ttccttccgc aagatttggc ttaacttttt ttacagtaag cgcgaaaaaa
     4441 attccataca taaaaagaag ccatagtcct gctcccagat accaaagaat ctttgcggat
     4501 agaatatcat cagaaataac aataagctgt gctgctaaca ctcctgtggc ggccacgaaa
     4561 gtgaaaaatc caactcctct caaatgatca gacatgtcaa ctagaaaacg gcgtgggtaa
     4621 ataacgattc ggaggatatt cataatccaa agaatgacg
//
LOCUS       DASCQP010000498         5820 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001787670, whole genome shotgun sequence.
ACCESSION   DASCQP010000498 DASCQP010000000
VERSION     DASCQP010000498.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 5820)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5820)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5820
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001787670"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..873)
                     /locus_tag="QF480_08510"
     CDS             complement(<1..873)
                     /locus_tag="QF480_08510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06643.1"
                     /translation="MNFKILFTTLLFGMSSILFSQEFVTGIQINEAVVLEAKKIALEN
                     RSSNCASDRLIEAKQLPFFDDFSTSNIFPNQSLWDGRSVFVNKDFPYMPVNIGAATFD
                     AIDSTGNIYSTGSIAPFEADRLMTQNIRLDSIFIPVGRKLTPADSVYLSFFYQPQGVG
                     DAPQLRDSLILEFSRYTGNLVYSHMDSITVISNIYLQNPGDTIRALDTLWAPALLGCN
                     PLVFTIAYINIPWGDSVTVACDSVFVPEINWDRMWYSEGLSLEEFKVIYNRDMIQVMI
                     PVIDTSYFIDEFRFR"
     gene            complement(863..1621)
                     /locus_tag="QF480_08515"
     CDS             complement(863..1621)
                     /locus_tag="QF480_08515"
                     /inference="COORDINATES: protein motif:HMM:NF015734.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PASTA domain-containing protein"
                     /protein_id="HJN06644.1"
                     /translation="MDIFTKHGELYIVPDFDGQTLKQLTDRGYSDYFIFEIIDSVYFK
                     SKQKGTVVLQNPLSGSKVKQGRHVYLTIVAQTPEKVLMPNLKNLSLRQALVTLESNEL
                     LVGELEYVQYFARNAVVDQLIGDEPIETDTELLKGTVINLVVGKGEFAVMIPMPFLIA
                     LSQSEVRKKLHYNSLNVGREYFLDDDDIAHARVYKTDPKALTEDMLILGQPVNIWYRS
                     DELIDFQEYLKEFEPDTLYANPDDMPNKLTKDEF"
     gene            1914..2891
                     /locus_tag="QF480_08520"
     CDS             1914..2891
                     /locus_tag="QF480_08520"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: protein motif:HMM:NF002527.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008716 - D-alanine-D-alanine ligase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HJN06645.1"
                     /translation="MKNIAIVCGGYSGEYQISVQSAEMVKKNLDNNKYKTYIIFIEKD
                     QWYFKNVDNIHHKIDKSDFSLKLDSDIIKFDGVFNAIHGTPGEDGKLLGYFDLLSIPY
                     TCCNMDTSALTFNKYLCNSFVRSIGIKVAQSFSFLEGEFINKDLVLDSLGLPVFIKPV
                     RSGSSVGISKVTAVDDFDLAVTKAFKTDNRILIEETIIGREIACGLFLKNKELNIFPL
                     TEIISKNDFFDYEAKYTAGLAEKITPPHNLDIEQETDIKAISSLLYNKLDCKGVVRID
                     YILTESELYFIEINTIPGFSQASIIPRQAKAMGIPISAVFNTIVENMFE"
     gene            complement(2946..3527)
                     /locus_tag="QF480_08525"
     CDS             complement(2946..3527)
                     /locus_tag="QF480_08525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002558456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA];
                     GO_process: GO:0009143 - nucleoside triphosphate catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="non-canonical purine NTP diphosphatase"
                     /protein_id="HJN06646.1"
                     /translation="MKKIVFATNNKHKLFEIRSILRNDFEVLSLSDIGYDKDIPETGN
                     TLAKNASQKSHTIYNKFNIDCFSDDTGLDIDALDGEPGVYSARYAGENASYNDNVNKV
                     LLKLNGIKNRKAAFRTVVSLILDGKEYQFEGSVSGKITLKKRGGGGFGYDPIFQPNGF
                     DSTFAEMPLDIKNKISHRGKAMEKLVLFLNGQR"
     gene            complement(3524..4120)
                     /locus_tag="QF480_08530"
     CDS             complement(3524..4120)
                     /locus_tag="QF480_08530"
                     /inference="COORDINATES: protein motif:HMM:NF018446.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022841 - potassium ion leak channel
                     activity [Evidence IEA];
                     GO_process: GO:0071805 - potassium ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TMEM175 family protein"
                     /protein_id="HJN06647.1"
                     /translation="MNLEKKFYLPNRIAALSDGIFAIAMTILVLNINIPDKDLVKQIG
                     LLNALLAHVQEFYSYFLSFFLLGVFWGIQHKHMNAIEKTDSGYIWLNIILLMFICLIP
                     FSASLQSVYNGSSVSSTIFGCNMLIIGFFLMLNWRYATKDHKLIAKDYSRENIVKGKK
                     YILIFILVTIAAIIIGLFTPDYSGITFLLIPILKAFTK"
     gene            4338..4622
                     /locus_tag="QF480_08535"
     CDS             4338..4622
                     /locus_tag="QF480_08535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06648.1"
                     /translation="MKIIKLLIVTFGFLVFAGACNSDSKADTWNDEQKAKWTKSCMEF
                     METNGVEKRNAVDFCDCMLKKTSEKYTPEEAAKITEEEERKLWDSCDYDW"
     gene            complement(4696..>5820)
                     /locus_tag="QF480_08540"
     CDS             complement(4696..>5820)
                     /locus_tag="QF480_08540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06649.1"
                     /translation="DGVGVSFPGLVTKFVLGYSEDCLGNTSLGPVRAVANPDQLKLLT
                     ELVTSVSADGPFNNTGVPGIKVVNLFAPGLGLLNPYYGRMADNPATDKLIDEVAKVDP
                     TFFSLWVGNNDVLDYATSGGINSITPLEGPIGVGFTSTYAAAVQTIMASANKGVLANI
                     PGVTSAAFFTTIHYNVVDIDDQLTVDDLNAEYALYNATMEQLGESYRINFQLGNNPMV
                     IMDETMLVPEPLKFRQMTNDELVLLSIPQDSIRCAMWGSVKPVSDKYILTISEITEVT
                     AAITAYNEIIKQTAETNGLAYVDFNSFLIEASTVGVVFDGITFTTDFITGNMFSLDGI
                     HLTPQGNAVVANYFIDAINSTYNSNIPKAVIGSYPATDYP"
BASE COUNT         1998 a         1032 c          941 g         1849 t
ORIGIN      
        1 cctaaatcta aattcatcaa taaaataaga agtatcaatt accgggatca ttacctgaat
       61 catatctctg ttatatatta ctttgaattc ttcaaggctc aatccttctg agtaccacat
      121 gcgatcccaa tttatttcag gaacaaatac cgaatcacaa gcaactgtaa ccgaatctcc
      181 ccaaggaata ttaatataag caattgtaaa caccaaagga ttacatccca ataaggctgg
      241 agcccacaat gtatcaagag ctctgattgt atctcctgga ttttgtagat atatatttga
      301 gattactgta atagaatcca tatgggagta aactaaatta cctgtatagc gcgaaaactc
      361 aagaatcaaa gaatctcgta attgaggagc atcaccaaca ccttgtggct gataaaaaaa
      421 gctcaagtaa acagagtcag ctggagtgag tttccttcca actggaataa atattgaatc
      481 caaacgaatg ttctgtgtca ttaatctgtc tgcctcaaat ggtgctattg agcctgtact
      541 ataaatatta ccagtgctat caatagcatc aaatgtggca gcaccaatat taacaggcat
      601 ataaggaaaa tctttgttaa caaataccga cctgccatcc cataatgatt gattagggaa
      661 aatattagag gttgaaaaat catcaaaaaa tggtagctgt ttggcttcta ttaacctatc
      721 agaagcacaa ttactcgatc gattttcaag agcaatcttt tttgcctcta gtactacagc
      781 ttcgtttatt tgaataccgg ttacaaattc ctgtgaaaac aaaatggaac tcattccaaa
      841 aagcagagtt gtaaataata tcttaaaatt catccttagt caatttattt ggcatatcat
      901 caggattagc atataatgta tcgggttcga attctttcaa atattcctga aaatcaatga
      961 gttcgtccga acgataccat atattaacag gttgtcccaa gataagcata tcttctgtta
     1021 acgcctttgg atcggttttg tataccctgg catgagctat atcgtcatca tctaaaaaat
     1081 attcccgacc gacatttaaa gaattatagt gtaatttttt tctgacttcc gattgactta
     1141 aagcaattaa aaacggcatt ggtatcatta cagcaaattc accctttcca acaacaagat
     1201 ttataactgt acctttaagt agttctgtat ctgtttcaat gggctcatca ccaataagct
     1261 gatcaacaac tgcgttacgt gcaaagtatt gaacatactc aagctcgcca acaagtaatt
     1321 cgtttgattc gagagtaacc aaggcttgtc gtaaggagag gtttttaaga ttgggcatca
     1381 aaactttttc aggcgtttgt gccacaatgg taagatacac atgacgacct tgctttacct
     1441 tggatccaga tagtgggttt tgcaaaacaa ctgttccttt ttgcttactt ttaaaataaa
     1501 cggaatcaat aatttcaaaa ataaaataat cgctatatcc cctatcagtt aactgtttca
     1561 gtgtttgtcc atcaaaatcg ggtacaatat acaactcccc atgtttcgtg aaaatatcca
     1621 tcgactttag tataatccaa agtataaata ttgatagaca taatgcaatc agaaaatgaa
     1681 aataaaatct tttacgtcct aaaaaataaa aaaaactcat tacagtttat ttgttgaatc
     1741 ctttggttaa taaggataca gttccataac ttcaatcatt tgaaattatt gtataatcac
     1801 aacaaaggta aaaattattg tccatcatta tattacttta cgcattgatc aaaaaaggag
     1861 ttaaatttgt actatcagga attaatttgc gtttacgtga ataattaatc tagatgaaga
     1921 atattgcaat tgtttgtgga ggatactctg gtgagtacca aatatcagta caaagtgctg
     1981 aaatggtcaa gaaaaatctc gataataata agtataaaac atacatcatt tttattgaga
     2041 aagatcaatg gtattttaag aatgttgata acatccatca taagatagac aaatcagatt
     2101 tttctcttaa actagattca gacatcataa aatttgacgg agtttttaat gccatacatg
     2161 gcactccagg cgaagatggt aagttattag gatattttga tttgttaagt ataccatata
     2221 cttgttgcaa tatggatact tctgcgctaa cattcaacaa atatttatgt aatagttttg
     2281 tgagatcgat tggaataaaa gttgcccaat cattttcatt tctagaagga gagttcatta
     2341 ataaagatct ggtactcgac tcattagggt tgcctgtgtt tattaagccc gttcgtagtg
     2401 ggtcaagcgt tggtatttcg aaagttacgg cggtagatga ttttgatctt gctgtgacaa
     2461 aagcatttaa aacagacaat agaattttaa ttgaagaaac aattattggt cgcgaaattg
     2521 cctgtggtct ctttttgaaa aacaaagaac taaatatttt tcctctgact gaaattatta
     2581 gtaagaacga cttttttgat tatgaagcaa aatacacagc cggacttgct gagaaaatta
     2641 caccacctca taaccttgat atcgaacaag aaactgatat caaggctatc tcttctctat
     2701 tatacaataa acttgattgc aagggtgtag ttcgaatcga ctacatatta actgaatcag
     2761 agctttattt tattgaaata aatacaatac ctggtttctc acaagctagc ataataccca
     2821 gacaagctaa agcaatgggc atacctatat ctgcagtgtt taatacgatt gttgaaaata
     2881 tgtttgaata actttaccta gatagttggt taattccttt ccgattacgg gttcttagaa
     2941 gttacttacc tctgcccatt taaaaacaag actaatttct ccattgcctt gccacgatga
     3001 ctaattttat ttttaatatc taatggcatt tcagcaaatg tactgtcaaa tccattaggt
     3061 tgaaatatag gatcatatcc aaatcctcca ccgcctcttt tcttaagagt tattttccca
     3121 gatacgcttc cttcaaactg gtattctttt ccatcaagaa ttagggaaac aaccgtacga
     3181 aatgcagctt tccgattttt aattccgttg agtttgagca atactttatt tacattatca
     3241 ttgtaggagg cattttcacc agcatacctt gctgaatata ctcctggttc tccatccaaa
     3301 gcatcaatat caaggcctgt atcatccgaa aaacaatcaa tattaaattt attgtaaatt
     3361 gtatgcgact tttgcgaagc atttttagca agtgtattcc cggtttcagg aatatcctta
     3421 tcgtacccga tatctgataa acttagcact tcaaaatcat ttcttaatat acttctgatt
     3481 tcaaacagtt tgtgcttatt attcgtagcg aatactattt ttttcatttt gtaaaagctt
     3541 ttaatattgg aataagtaaa aatgtaattc ctgaataatc gggagtaaac agtccaatta
     3601 ttatcgctgc aattgttact aaaataaata taaggatata cttttttccc ttaacgatat
     3661 tctctctact ataatctttt gcaatgagtt tgtgatcttt tgtagcataa cgccaattaa
     3721 gcatcaaaaa gaatcctatt atcagcatat tgcacccgaa aatagtggaa gaaacagaac
     3781 tgccattata aactgattga agactagctg aaaaaggaat caagcaaata aacattagaa
     3841 gaatgatatt cagccaaata tatccagaat cagttttttc aatcgcattc atatgtttat
     3901 gttgtattcc ccagaaaaca cctaacagaa agaaactgag aaaataagag tagaattctt
     3961 gtacatgagc aagcaaagca ttcaaaagac ctatttgctt aactaagtct ttatcgggaa
     4021 tgttaatatt caacaccaat atagtcatag caattgcaaa tatgccatca gaaagagcag
     4081 cgatacggtt gggtaaataa aatttcttct cgagattcat aatactagct attagttcgt
     4141 caaggattca gaatcaaaat aataaatatt tcgaagcaaa gatagttaga ataagtaaat
     4201 ataattagat cagaactttt tacttattat acaataagcc tggcaaatat tctgtttctc
     4261 ttaaaaagaa attgaataat tactatatta acactacttt tgtcatttat ccattattaa
     4321 aactaaagtc tattaacatg aagattatca aattattaat tgtaacattc ggatttttag
     4381 tatttgcagg tgcttgtaac tctgattcaa aggctgacac ctggaatgac gagcagaaag
     4441 ccaaatggac caaaagttgc atggagttta tggaaacaaa cggagttgaa aagagaaatg
     4501 ctgttgactt ttgtgattgt atgttgaaaa aaacatcaga aaaatacact cctgaagaag
     4561 cggctaaaat aactgaggaa gaagaaagaa aattatggga ctcatgtgat tacgactggt
     4621 aggcttgcta taaagttcaa gctttcatca cctttcgtta aatctaattc tttccaacct
     4681 gtctcaaact atttattaag ggtaatcagt tgctggataa gaacctataa ctgctttagg
     4741 tatatttgaa ttatatgttg agttaatagc atcaataaaa taattcgcta caactgcatt
     4801 cccttgcgga gtaaggtgaa taccatcaag agagaacata tttcctgtaa taaagtcagt
     4861 agtaaatgtg atcccatcaa atacaactcc aactgtgctt gcctcaatta aaaagctatt
     4921 aaagtccaca taagccaatc cattggtttc agccgtttgc ttaataattt cattatatgc
     4981 tgtaatagcg gctgtaactt ctgtaatttc tgaaattgtc aaaatatact tatcagaaac
     5041 aggtttgacg ctaccccaca tcgcacatct aatcgaatcc tgaggtatag atagaagcac
     5101 taactcatca ttcgtcattt gtctgaattt aagaggttcc ggaacaagca ttgtctcatc
     5161 catgataacc attggattat ttcccagttg aaagtttatt ctgtaagatt ctcctaattg
     5221 ttccatagtt gcgttatata gagcatattc tgcatttaga tcatccacag taagttgatc
     5281 atcaatgtct actacattat aatgtatcgt tgtgaaaaaa gcagcggaag taactcccgg
     5341 gatatttgca agaacacctt tgttagctga tgccataata gtttgtactg ctgctgcata
     5401 agttgaagta aagccaacgc caatgggacc ttctaaaggg gttatgctat taatgcctcc
     5461 cgaagtagca tagtctaata catcgttgtt accaacccat aaactgaaaa atgtaggatc
     5521 aacttttgca acttcatcaa taagtttgtc ggttgctgga ttatctgcca tacgtccata
     5581 atatggattt agtaggccaa gtccaggagc gaatagatta actactttaa tacccgggac
     5641 gcctgtatta ttaaatggtc catcagcaga aactgacgtt acgagttcgg ttaacagctt
     5701 tagttggtca ggattagcaa ctgctctcac aggtcccagt gatgtatttc ccaggcaatc
     5761 ttcactataa ccaagcacaa attttgttac caaaccagga aatgaaacgc caacaccatc
//
LOCUS       DASCQP010000499         1944 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001794925, whole genome shotgun sequence.
ACCESSION   DASCQP010000499 DASCQP010000000
VERSION     DASCQP010000499.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1944)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1944)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1944
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001794925"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1944
                     /locus_tag="QF480_08545"
     CDS             <1..>1944
                     /locus_tag="QF480_08545"
                     /inference="COORDINATES: protein motif:HMM:NF040138.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PKD domain-containing protein"
                     /protein_id="HJN06650.1"
                     /translation="HADLHVFELNPLNNKLYVGNDGGIWWTDDGNIWNRITNGLAIGQ
                     QYKLGQSKLQQNHVTTGYQDNGISLYNLDTWIQSDMYADGMECEMDNHDTTLSYGCMQ
                     YGRMYRMVNDKAAELIAGDGVNGINESGQWVTPFCQHESNPEVMFIGYNNLWRTTNLQ
                     QNSPSWTRISLNNGGGSITVVENSPADGNLFYYATTGQSLVRSENIMDSSPNYVDLRD
                     LLPGSGAITDVEAHPWDDNIVYITRNRQVYKSDDKGLSWETITGNLPDVSLNDIAYYD
                     RNSVEGLYVASNIGVFFKDEFMTDWVMFSDNLPAAILATEVEIYLAPVDRTQDRVRIS
                     SYGRGLWGSSTYYYSPIANFEASEINIPAGCAIDFYDRSQGYPHSWSWTFDGGTPSTS
                     DEPNPTGITYENEGSFAVTLTVTNPDGSDTKTVTEYITVVEGMLPVVNFSTQDTAQCS
                     NAPIYFYDESEGCPTQWLWSFDPDNVTYLEGTTEESQNPIISLSETGLYSVTLAVSNS
                     SGQSQLIKDDYLFIGGQLLPFSEDFAGSSFNAMGWKVENPDQSLTWGLTEVETGSGVN
                     QVSWMNNFNYPQMGARNYLVSPNLNFAGFANIFMTFDYAYAERYSPSDSLIVSISDDC
                     GDSWTQVYANGPNGAGIFATAEPT"
BASE COUNT          610 a          345 c          424 g          565 t
ORIGIN      
        1 catgcagatc ttcacgtatt tgagttgaac ccactaaata acaaacttta tgttggtaat
       61 gatggtggaa tatggtggac tgatgatggt aatatttgga atagaataac taatggattg
      121 gcaattggac aacaatacaa acttggacaa agtaaacttc agcaaaacca tgttactact
      181 ggataccagg ataatggaat ctccctctac aatcttgata cttggattca atccgatatg
      241 tatgccgatg gtatggagtg tgaaatggac aaccatgaca ccacgttgag ttatggctgc
      301 atgcaatacg gtcgtatgta tcgtatggta aatgacaaag ccgcagaatt gattgctgga
      361 gatggggtta atggtattaa tgaaagtggt caatgggtaa ctccattttg ccagcacgaa
      421 agcaatcctg aagttatgtt tataggctat aataatcttt ggagaacaac aaaccttcaa
      481 caaaattcac cctcttggac acgaatatct ctgaacaatg gcggcggatc tataacggta
      541 gtggaaaact cacctgctga tggaaatcta ttttattatg ccactaccgg acaaagtctt
      601 gtaaggtcag aaaacataat ggatagttct ccaaattacg ttgatcttag agatttactt
      661 ccaggatctg gtgctattac tgatgtagaa gctcacccat gggatgacaa cattgtatac
      721 ataactagga acaggcaggt ttataaatca gacgataaag gattaagttg ggaaactatt
      781 acgggaaatc ttccagatgt tagcctaaat gatattgctt attatgatcg aaatagtgtt
      841 gaaggtctct atgttgcatc taatattggg gtctttttta aagatgagtt tatgaccgat
      901 tgggtgatgt tttctgataa cctaccagct gcaatattag ctactgaagt tgagatatat
      961 ctagctcctg tagaccgaac tcaagataga gttagaatat cttcttatgg acgtggacta
     1021 tggggttctt caacatatta ttactcaccg atagccaatt tcgaagctag cgaaataaac
     1081 attccggcgg gatgtgcaat agatttctat gatcgttcac aaggatatcc acatagctgg
     1141 tcatggacct tcgatggggg aacaccatcc acttcagatg aaccaaatcc gactggtatt
     1201 acttatgaaa atgaaggaag ctttgcggtc accttaacag ttacaaaccc tgatggaagc
     1261 gatactaaaa cagtaaccga atatattaca gtagtcgaag gtatgttgcc agtagtgaat
     1321 tttagcacac aagatacagc ccaatgttca aatgcaccaa tttattttta cgatgagtcg
     1381 gaagggtgtc caacccaatg gttgtggtcg ttcgatcctg acaacgtaac ttacttagaa
     1441 ggtactacag aagaatcaca aaatccgatt atctcgctaa gcgagacagg cttatattct
     1501 gttacactgg ctgtgtcgaa tagctcagga caaagtcaat taattaagga cgattacctc
     1561 tttatcgggg gacaactttt gcctttttcc gaggactttg ccggaagtag ttttaatgca
     1621 atgggttgga aagtagagaa cccggatcaa agtcttacat ggggtcttac tgaagtagaa
     1681 actggttctg gagtaaatca ggtaagctgg atgaacaact ttaattatcc acaaatgggg
     1741 gcaaggaatt atctggtttc tcctaatttg aactttgcag gatttgcaaa tatttttatg
     1801 acatttgatt acgcctacgc agagcgttat tcaccaagtg attctcttat agtaagcatt
     1861 tctgatgatt gtggtgacag ctggacacaa gtttatgcta atggacctaa cggtgcagga
     1921 atttttgcaa cggctgaacc aact
//
LOCUS       DASCQP010000500         2028 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001797277, whole genome shotgun sequence.
ACCESSION   DASCQP010000500 DASCQP010000000
VERSION     DASCQP010000500.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2028)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2028)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2028
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001797277"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            147..572
                     /locus_tag="QF480_08550"
     CDS             147..572
                     /locus_tag="QF480_08550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004291365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SufE family protein"
                     /protein_id="HJN06651.1"
                     /translation="MTIQEKAKLVVDEFSIFDDWMDKYSFLIELGKELPLIDGKYKNE
                     THVISGCQSRVWLHAEEKNGIVKFTADSDAVITKGIISLLISVLSGSSPSEIITANFD
                     FLDEIGLKSHLSPSRANGLVSMIKQMQLYARALELKRNA"
     gene            675..995
                     /locus_tag="QF480_08555"
     CDS             675..995
                     /locus_tag="QF480_08555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004327511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly protein"
                     /protein_id="HJN06652.1"
                     /translation="MNIEEIRNLEAKIIVILKNIFDPEIPVNIYELGLIYEIKVEENG
                     NVKILMTLTSPNCPVAESMPAQVKEEIGYLSDVKNVNVEITFEPPWDHDMMTEEAKLE
                     LGML"
     gene            1085..>2028
                     /locus_tag="QF480_08560"
     CDS             1085..>2028
                     /locus_tag="QF480_08560"
                     /inference="COORDINATES: protein motif:HMM:NF015291.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GH3 auxin-responsive promoter family protein"
                     /protein_id="HJN06653.1"
                     /translation="MPILGSIIKKAFELRNLPVEKQRRKLNPVTAQKRELKKLLQKSQ
                     FTAIGEHYKFSKLLNTHNVQKSFENTVPVHDYQSMYKRWWYRALNGESYVAWPGRVRY
                     FALSSGTSDASSKYIPITNEMLRGIKQVTLRQLITMTKFDFPLDFYEKGILMIGGSTH
                     LQYNGTYYKGDLSGITAGNIPFWFQHFYRPGRRISRTADWATKLNEMVKKAPSWDIGI
                     IVGVPAWVQILMERIISEYKVETIHDIWPNLSVYVHSGVSFKPYVKSFEKLVAKPLMY
                     NESYLASEGYIAFQNGKDSLGMQMVLDNGIYYEFVPFN"
BASE COUNT          719 a          312 c          384 g          613 t
ORIGIN      
        1 gattatataa tacaagccaa gaagtggact tgtttatcga tgcagttaag aaagctgtta
       61 atatgttagc ctaaattaga atacacatgg tctagaaata actagtaaat tttagcatag
      121 aggagaacct acttaataaa ttgaacatga ctatacaaga aaaagcaaaa ttggtagttg
      181 atgaattctc gatttttgat gactggatgg ataaatattc cttccttatt gaattaggaa
      241 aagaacttcc cctgattgat gggaaatata aaaatgagac ccacgtaatt tcaggttgtc
      301 aatcacgagt ttggctgcat gccgaagaaa aaaatggcat agttaaattt acagctgata
      361 gtgatgccgt tatcacaaaa ggaataatat ctttattaat cagcgtatta tcagggagtt
      421 ctccatcaga gattataact gcaaattttg attttctgga tgaaataggc ctgaaatctc
      481 acttgtcgcc ttcaagagca aacggtttag tttcgatgat aaaacaaatg caattatatg
      541 cacgagcatt ggaattaaaa aggaatgctt aaatgaatac atgtcataat aacagtatct
      601 attcaaatct tagcattata gcattcacac atttaagcat tttcgcattt actaatacca
      661 caaaaattaa aaatatgaac atagaagaaa tacgaaatct tgaagcaaaa ataatagtca
      721 ttcttaaaaa tatattcgat cctgaaattc cagtaaatat atatgagctt ggcttgattt
      781 acgagattaa agttgaagaa aatggtaatg taaaaatatt aatgactctt acgtcaccta
      841 attgtcctgt tgccgagagc atgcctgctc aggtaaaaga agaaataggc tatttgagtg
      901 atgttaagaa tgtgaatgtt gagattactt ttgagcctcc ttgggatcat gatatgatga
      961 cagaagaagc aaagctggaa ttagggatgt tgtaatttgt atgcaattta ttctgatccg
     1021 ttgaaatgat tgccccaaaa accataaatt ttaataaatt tgctggctca taattattga
     1081 gactatgcca atattgggaa gcattattaa aaaagcattt gaattgcgta atctgcctgt
     1141 tgaaaagcaa cgtagaaaac tcaacccagt aactgctcaa aaaagggaat tgaaaaagct
     1201 tctccaaaaa tcacaattta ccgcaattgg tgaacattat aagttttcaa aactgcttaa
     1261 tacacataat gttcaaaaat catttgaaaa tactgttcct gttcacgact atcaatcaat
     1321 gtacaaacgt tggtggtata gggcattaaa tggtgaatcg tatgttgcat ggccaggacg
     1381 agttaggtat tttgcactaa gttcaggcac atccgatgca tcaagtaaat atattcctat
     1441 taccaacgag atgctacgcg gcataaaaca ggtaaccctg aggcaattaa ttactatgac
     1501 gaaatttgac tttccactcg atttttatga aaaaggtatc ttgatgatcg gtggcagtac
     1561 tcacttgcaa tacaacggaa cttattacaa aggcgatttg tcggggataa ctgcaggtaa
     1621 tattccattc tggtttcaac atttttacag accagggaga cgtatttcac gtactgccga
     1681 ctgggctacc aaacttaatg aaatggttaa aaaagcacct tcttgggata ttggtattat
     1741 tgtaggtgta cctgcatggg ttcagatatt gatggagaga ataataagtg agtacaaggt
     1801 ggaaacaatt catgatattt ggccaaacct ttccgtttat gttcatagtg gagtttcatt
     1861 taaaccttat gtaaagagct ttgaaaagct ggtagccaaa cccctaatgt ataatgaatc
     1921 atacctagca tcagaaggat acatcgcttt tcaaaatgga aaggattcat tggggatgca
     1981 gatggtactt gataatggaa tttattacga atttgttcca tttaacag
//
LOCUS       DASCQP010000501         2589 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001797801, whole genome shotgun sequence.
ACCESSION   DASCQP010000501 DASCQP010000000
VERSION     DASCQP010000501.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2589)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2589)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2589
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001797801"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(216..1340)
                     /locus_tag="QF480_08565"
     CDS             complement(216..1340)
                     /locus_tag="QF480_08565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06654.1"
                     /translation="MKLTFLGFLAIAILATISCQKDNGEMTDGQLIAAIQKATNKQNI
                     EITELPSASRNILDQEYADNNIDGAKLAPELGYEVDMIRLSGPKASEFINAYFNLSGR
                     ELKGDKGGKGDKGDKGDGDKRDCFELVYPVTYIMPDGTEITVNSKDDAGWAEIKEWYA
                     AHPDVKKRPAIQFPVDIKWKNGTVITINNREEMRQARKRCKGDGDKRDCFKLVYPVTY
                     IMPDGTEIIVYRDTEDGWAEVKAWYAAHPDVKKRPAIKFPVDIEWRNGKIITINNREG
                     MHRAKRRCKGDGGDKERCFEFIYPVTYIMPDGTEITVNGEDDGGWAEIRAWYVAHPDV
                     KKRPEFKFPIDIKYKDNDAIKTINNREELRRAYEECKDKD"
     gene            complement(1435..>2589)
                     /locus_tag="QF480_08570"
     CDS             complement(1435..>2589)
                     /locus_tag="QF480_08570"
                     /inference="COORDINATES: protein motif:HMM:NF019310.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJN06655.1"
                     /translation="GTNYQLGFLFQFSALVFLFLIVINEFLKRVKNRKKLLRIVAITT
                     RLPLITLLFFPDNLADILNFAYYHYIFLFLFLVYFSGNIFINPNINYLLKVNYSHVNF
                     GRLYSYSTSVNKIVMLIITFAYGYLLDYNNFAFIYIIPVTAIFATMSVFILSTIHYPE
                     EDIPIQKKSIFASVKASVSEMILILKKNIPYRHFEIGFMFYGFSFMLTMTVITIYFYE
                     ALNLNYASVAFYRNISNILVIILLPFFGRLISHIDPRKFAVITFSSITLYIFFLMITS
                     YFPSHFEFLDVTIYYTLLLYILFHGIFAATMVLLWNIGSAYFCKPNEAGTYQSLHLSL
                     TGVRAIFAPLIGVLFYELLGFTPTFSIAIFSLLIAILLMLWSYSRDARIK"
BASE COUNT          857 a          471 c          388 g          873 t
ORIGIN      
        1 ggcagggtgc acaaagtaca tcactaagac gcacaaagtc aaacaaaagc attcaatatc
       61 agaaccatac atcgtttttc tattctgagg ctttatcctg attagtaaca aaaagaattt
      121 agttcctgag aaaacaaaaa aggtgaccaa aatagaattt cagtcacctt tccttttaaa
      181 gatatttgct aaaaaacaag cgcgcttgtt tatctttaat ctttatcctt gcattcttca
      241 tatgccctac gcaattcctc acgattattg attgttttta tagcatcgtt atccttatat
      301 tttatatcta tcggaaattt aaactcaggt cgttttttta catctggatg tgctacatac
      361 caagctctaa tttcagccca gcctccatca tcttctccat tcacggtaat ttctgtgcca
      421 tcaggcataa tgtatgtaac aggataaata aattcaaaac atctttcttt atcacctccg
      481 tcacctttac aacgtctttt tgccctgtgc atcccttctc tattatttat ggtaataatt
      541 ttaccatttc tccattcgat atcaacagga aatttaattg caggtcgttt tttaacatcg
      601 gggtgtgctg cataccaagc tttaacttct gcccagccat cctcagtatc tctataaacg
      661 ataatttctg taccatcggg cataatgtaa gttacaggat aaactagttt aaaacaatct
      721 cttttgtcac catcaccttt acaccgtttt cttgcctggc gcatctcttc cctgttattg
      781 atagttataa ctgtgccatt tttccatttt atatcaacag gaaattggat agcaggtctt
      841 tttttgacat cagggtgtgc tgcgtaccat tctttgattt cggcccagcc agcatcatcc
      901 ttactattca cagtaatctc agttccgtca ggcataatgt aggttacagg ataaactagt
      961 tcaaagcaat ctcttttgtc cccatcgcct ttatctcctt tgtcgccttt accacccttg
     1021 tctcctttca attctcttcc acttaaatta aaatatgcat ttatgaactc actcgctttt
     1081 ggtccactta atcttatcat atcaacctcg tatcccaatt cgggagcaag ttttgcacca
     1141 tcaatattgt tatcagcata ttcctggtca agaatatttc tagatgcgga aggtaattca
     1201 gttatttcaa tattttgctt attagtggct ttttgtattg ccgcaattag ttgtccatca
     1261 gtcatttctc cattatcctt ttggcaggat attgttgcca gtatggcaat tgctagaaat
     1321 cctaaaaatg ttaatttcat ggtataagat tttaaataag ttcgtgtttg gatatgggta
     1381 tcaaaactat aatttttgta aagatagaaa aaataattaa gacaaattac tatcctattt
     1441 tatccttgca tccctactat acgaccagag catcaataat atagcaataa gcaacgaaaa
     1501 aattgcaatt gaaaacgtag gtgtaaatcc taacaattca taaaatagca ctcctattaa
     1561 tggcgcaaat attgctctaa ctcccgttaa tgataaatgt aacgactggt atgtaccggc
     1621 ctcgttaggt ttgcaaaaat atgcagatcc aatattccat agtaacacca ttgttgctgc
     1681 aaaaattccg tggaataata tatatagtaa aagtgtatag taaattgtaa catctaggaa
     1741 ctcgaaatga gatgggaaat aagatgtaat cattaaaaag aaaatatata aagttattga
     1801 tgaaaatgtt atcacagcaa atttcctggg atcaatatga ctaattagcc ttccaaagaa
     1861 tggcaataat attattacca atatgttaga aatatttctg taaaaggcta cactagcata
     1921 atttaggttt aatgcctcgt aaaaatatat tgtaataaca gtcatagtta acataaagga
     1981 aaaaccgtag aacatgaagc ctatttcaaa atgcctgtaa ggaatatttt ttttgagaat
     2041 tagaatcatt tcactaacgg aggctttcac ggaagcaaaa atactttttt tctgaattgg
     2101 tatgtcctcc tcaggataat gtattgttga taaaataaaa actgacatag tagcaaatat
     2161 tgctgttaca ggtataatgt agataaatgc aaagttgtta taatcaagga gataaccata
     2221 ggcgaatgtg atgattagca ttacaatttt attaacactc gttgaataac tatataacct
     2281 gccaaaatta acgtggctat aatttacttt tagcaggtag ttaatatttg gatttatgaa
     2341 aatattacct gagaaataga ctaaaaacaa gaataaaaat atatagtgat aataagcaaa
     2401 gtttaagatg tcagctagat tatcaggaaa aaacagcaat gtaattagtg gtagtcttgt
     2461 tgttattgct acaatcctta atagcttttt cctattttta acccttttta gaaattcgtt
     2521 aataactatc aaaaatagaa acaccagggc actgaattga aataaaaatc caagctgata
     2581 attagttcc
//
LOCUS       DASCQP010000502         2822 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001801855, whole genome shotgun sequence.
ACCESSION   DASCQP010000502 DASCQP010000000
VERSION     DASCQP010000502.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2822)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2822)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2822
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001801855"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            260..955
                     /locus_tag="QF480_08575"
     CDS             260..955
                     /locus_tag="QF480_08575"
                     /inference="COORDINATES: protein motif:HMM:NF012257.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HJN06656.1"
                     /translation="MKTIKEIESCNSCNNRKDLFESLDEAELQAVNDTRKELIFKRGD
                     VIRKEGDPINSFLYLRSGLIKLYKTDKKGKDHILSISKPGDLISLLSIFSNSVYKYSI
                     AAIEETKVCDIELSTFQNVIRSNSSFTLRILNGISRISDNIIENQFEIRQRQVKGRIA
                     YFLIFLSDHIYSSRTFRLPVTRREIGELISMTTENTIRTLSEFRQDGIISMEGKSLKI
                     LDYKRLEGVSNTG"
     gene            1153..1896
                     /locus_tag="QF480_08580"
     CDS             1153..1896
                     /locus_tag="QF480_08580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013612370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenol monophosphomannose synthase"
                     /protein_id="HJN06657.1"
                     /translation="MIDKLVIIPTYNEKENIERIIRKVFSLEKEFNILVVEDNSPDGT
                     GKIVKSLMEEFNNRLFILERKGKLGLGTAYISGFKWGLDHEYNYIFEMDADFSHNPED
                     LIRLYNATKDDGADVAIGSRYIEGVNVVNWPMGRVLMSYYASMYVRIVTGLKIMDTTA
                     GFMCWTRKVLDTIDFDSIKFVGYAFQIEMKYTACKLGFNVVEVPIIFTDRTEGTSKMN
                     KSIFKEAIFGILDLRFRNIVGRIKPIKSF"
     gene            1966..>2822
                     /locus_tag="QF480_08585"
     CDS             1966..>2822
                     /locus_tag="QF480_08585"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006800815.1"
                     /note="Catalyzes the reversible hydrolysis of the amide
                     bond within dihydroorotate. This metabolic intermediate is
                     required for the biosynthesis of pyrimidine nucleotides;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HJN06658.1"
                     /translation="MSSVKKVISGATIVNEGLSFIGDVFLIDNVIEKITSFSDTSDYT
                     GYEIINAVGLYLLPGVIDDQVHFRDPGLTYKGDIYTESKAAVAGGVTSFMDMPNTIPN
                     CLTQELLEEKYQHAAITSLANYSFYMGASNDNLEEIIKTDPHTVCGVKVFMGSSTGNM
                     LVDNEKTLSGIFSSAPTLVAVHCEDENTILKNTAYYFEKYGEDAPISIHPKIRSVEAC
                     YLSSAKAVELAKRHGTRLHVLHLTTEKEMGLFNNDLPLEEKKITAEVCIHHLWFSEKD
                     YGKKGNFIK"
BASE COUNT          991 a          372 c          538 g          921 t
ORIGIN      
        1 ttttttattt agaattttca atcccgacag caatcgggga gaaactattc aggaatttct
       61 atatatttgt tttaatccta aggtcgcaaa ggattatgat taaaatattt catgtttatt
      121 gtatttattt ggtgttaata ttttgttaaa ttgttaaatt gaataacttt gactatgcaa
      181 agatatatcg ataaaactac atatatataa agctagatat gatatatatc attataaagg
      241 tcaaaaaccg taatttagaa tgaaaacaat taaagaaata gaatcctgca attcttgcaa
      301 taaccgaaaa gatttattcg aatcattgga tgaggctgag ttacaggcag taaacgacac
      361 aaggaaagaa cttattttca agagaggaga tgttatacgt aaggaggggg atccaattaa
      421 ttcattccta tatttgcgta gtggtttaat aaaactttac aaaacagata aaaagggaaa
      481 ggatcatatt ttaagtatta gtaagcctgg agacttaata agtttattga gtattttctc
      541 aaattcggtg tataaatatt caattgcagc aattgaagaa acgaaagttt gtgatattga
      601 actcagtact tttcaaaatg ttattaggtc gaacagttca ttcacattac gaatattgaa
      661 cggaattagc cgcatttctg acaatatcat tgaaaatcaa tttgaaatac gccaaaggca
      721 ggtaaaagga aggattgcat attttctaat ttttttatct gatcatattt actctagccg
      781 tacctttaga ttgccggtta cacgtagaga aataggtgaa ttaatatcaa tgacaactga
      841 aaatactata cgaacattat cagaatttag acaagatgga ataatatcaa tggagggtaa
      901 atctcttaag atactagatt ataaacgatt agaaggtgtc tcaaataccg gataagagtt
      961 tatgacgtta ttaactacct gctaaaatta atgttaccgc tatttgactt agggtagttg
     1021 aatgataatt tatcattttt gagttctgaa agaaatgatt tccattttgg tactaagctg
     1081 gaaacaaatt cgttttattc aatgtgtata tttgaacttt aaactatttt cgcagaaatt
     1141 tttattgcac gcatgattga taaactggta attataccaa catataacga aaaggagaat
     1201 atcgaacgca ttattcgtaa ggtttttagt cttgaaaaag agtttaatat tcttgttgta
     1261 gaagataaca gccctgacgg tactggcaaa attgttaaaa gtttgatgga agagtttaac
     1321 aataggttgt ttattttaga gagaaaagga aaactagggc ttggaacagc atacattagt
     1381 ggttttaaat ggggacttga tcatgaatac aattatattt ttgagatgga tgccgatttt
     1441 tcgcataatc cggaagattt aatacgactt tataatgcta caaaagatga tggagctgat
     1501 gttgcaatcg ggtcacgtta catagaagga gtgaatgttg ttaattggcc aatgggaaga
     1561 gtcctgatgt cttattatgc atcaatgtat gttcgtattg ttaccggact aaaaattatg
     1621 gatactacgg ccggatttat gtgctggaca aggaaggtgc tggacacaat agatttcgat
     1681 agtataaagt ttgttggcta tgcttttcaa attgaaatga aatatacagc ttgtaagctt
     1741 ggttttaatg ttgttgaagt acctattatt tttaccgatc gtacagaagg aacatctaaa
     1801 atgaataaaa gcatctttaa agaagcaata tttggaatac ttgatttaag atttagaaat
     1861 attgtgggac gtattaagcc tattaaatcg ttttaagttt aggataggtc cttactaata
     1921 tttgaatagt tctctaacaa taacctgtaa caaaaaacaa atattatgag ttctgtgaaa
     1981 aaagtaattt ccggagcaac aattgttaat gaaggcttat cttttattgg agatgtattt
     2041 ctaatagata atgttattga aaagataacc agtttcagtg atacttctga ttatacaggc
     2101 tacgaaataa ttaatgcagt aggtctatac ctattgcctg gagtaattga cgatcaagtt
     2161 cattttcgcg atccaggtct gacatataaa ggtgatattt atacagagag taaagctgca
     2221 gttgctggtg gtgttaccag tttcatggat atgccaaata caattccaaa ctgtttaact
     2281 caggaattac tagaagaaaa ataccaacat gctgctatca cctctttggc caactatagc
     2341 ttctacatgg gggcctcaaa cgataacctg gaagaaatta ttaagacaga tcctcatacg
     2401 gtttgcggag taaaagtttt tatgggttca tcaaccggaa atatgttggt tgataatgaa
     2461 aagacgttat caggaatttt ttcttcagca cccacattag tagcagtgca ttgtgaagat
     2521 gaaaatacta ttttgaaaaa cactgcttat tattttgaga agtacggtga agatgcccca
     2581 attagtattc atccaaaaat ccggtcagta gaagcatgtt atttgtcatc tgcgaaagct
     2641 gtagaacttg caaaaagaca tggaacaagg ttacacgttc tacatcttac aactgagaag
     2701 gaaatgggtc tgtttaataa tgatttgcca cttgaggaga aaaaaataac agctgaggtt
     2761 tgtattcatc atctttggtt ttcggaaaaa gactatggta agaaaggcaa tttcattaaa
     2821 tg
//
LOCUS       DASCQP010000503         1624 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001820653, whole genome shotgun sequence.
ACCESSION   DASCQP010000503 DASCQP010000000
VERSION     DASCQP010000503.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1624)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1624)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1624
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001820653"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..456)
                     /gene="folE"
                     /locus_tag="QF480_08590"
     CDS             complement(<1..456)
                     /gene="folE"
                     /locus_tag="QF480_08590"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009137109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003934 - GTP cyclohydrolase I activity
                     [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0042559 - pteridine-containing compound
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0046654 - tetrahydrofolate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I"
                     /protein_id="HJN06659.1"
                     /translation="MKKPIELLSYEKIEKFNPENIAKLKNHYREILNLIGEDVDREGL
                     LETPLRLAKSIQFLTQGYDHDPEEILLSAKFKEDYRQMVIVKDIEIFSMCEHHMIPFI
                     GKAHVAYIPNGYITGLSKIARVVEVYSRRLQVQERLTTQIKDTIQNTLNP"
     gene            complement(533..946)
                     /locus_tag="QF480_08595"
     CDS             complement(533..946)
                     /locus_tag="QF480_08595"
                     /EC_number="4.1.2.50"
                     /inference="COORDINATES: protein motif:HMM:NF013411.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070497 -
                     6-carboxy-5,6,7,8-tetrahydropterin synthase activity
                     [Evidence IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase"
                     /protein_id="HJN06660.1"
                     /translation="MIHITRRERFNAAHRLFRHDFTDEQNIEVFGKCSNPNWHGHNYE
                     LYITVKGNINEMTGFLINLKTLSDAIKQYVINKLDHKNINIEVDFMQGKLASTENLAV
                     GIWEELQQRIHDLGAELHCVKVIESENNYVEYFGK"
     gene            1076..>1624
                     /locus_tag="QF480_08600"
     CDS             1076..>1624
                     /locus_tag="QF480_08600"
                     /inference="COORDINATES: protein motif:HMM:NF017046.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P N-terminal domain-containing
                     protein"
                     /protein_id="HJN06661.1"
                     /translation="MRYLPINNKLFVENRKRFTSLLPKDSAAIFYSNDQQPRNGDQYF
                     PFRQQSDFFYLTGINQEKSILLIIPDIEKKKLKEALFLIKTNEQIAIWEGHKFTKDEA
                     KEISGIENIYWLDEFDLALREVMAATNNIFLNRNENPKFCPDVKERNHRLGEELKNDF
                     PLHNYSRSAPLLAQLRLIKSKEE"
BASE COUNT          535 a          279 c          249 g          561 t
ORIGIN      
        1 agggtttaat gtattttgaa ttgtgtcttt tatttgtgtt gtgagtcgtt cctgcacttg
       61 cagtcttctt gaataaacct caacaacccg ggcaatttta ctcaatcctg ttatatatcc
      121 gttaggaata tatgccacat gtgcttttcc aataaatggg atcatatgat gttcacacat
      181 tgaaaatatc tcaatatcct ttacaataac catttggcga tagtcctctt taaacttggc
      241 tgataataaa atctcttcag gatcatgatc ataaccttga gttaaaaatt gtatagattt
      301 tgcaagtctt aaaggggttt ccaataaacc ttctctgtca acatcttcac caataagatt
      361 taatatctct ctataatgat ttttcaactt ggcaatattc tcaggattaa atttttctat
      421 cttttcgtat gataataatt ctatgggttt tttcatttgt atataatttc aatctattac
      481 tagacaaaaa aagtgccaac attaaaatat ggacaataat taaattcgat gattacttac
      541 caaagtattc aacataatta ttttctgatt cgattacttt aacacaatga agttcagcac
      601 ctaagtcatg aatacgttgt tgaagctctt cccaaatccc gactgccaaa ttttccgttg
      661 aagcgagttt gccttgcata aaatcaactt cgatattaat attcttatgg tcgagtttat
      721 taattacata ttgtttaatt gcgtcactga gagttttgag gttaattaaa aaaccagtca
      781 tttcattaat atttcccttt accgtaatat ataattcata attatggcca tgccagtttg
      841 ggttcgaaca ttttccaaac acttcaatat tttgctcatc ggtgaaatcg tgcctgaata
      901 atctgtgtgc tgcattaaat cgttcccttc gagttatatg tatcataact gcattttatt
      961 ttcaaaggta gtgtaatttc tactttcatc aaatcgaacg gttcacctag attaaggagg
     1021 gcagattata ttattatatt tgctccatta attaaccttg ttaacgtgta taattatgag
     1081 gtatttgcca attaacaaca aactgtttgt tgaaaacaga aaacgtttta ctagtttatt
     1141 acccaaagat tcagctgcta tattttattc aaacgatcaa caaccacgta atggcgatca
     1201 gtatttccct ttccgccagc aatccgactt tttttatctg acaggcatta atcaggaaaa
     1261 aagcatatta ttgattatcc ccgatattga aaaaaagaaa ttgaaagaag cattgttttt
     1321 aattaagaca aatgaacaaa ttgcaatatg ggaaggacat aaatttacta aggacgaagc
     1381 taaagaaatc tccggaatag aaaatattta ttggttggat gaatttgacc tagcactcag
     1441 ggaagttatg gccgcaacta ataacatctt tctaaaccga aatgaaaatc caaagttttg
     1501 ccctgacgta aaagagcgaa accatcgcct aggtgaggaa ttgaaaaatg attttccatt
     1561 gcacaattac agtaggtctg caccattgtt ggctcaatta aggttaataa aatccaaaga
     1621 ggag
//
LOCUS       DASCQP010000504         4001 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001822266, whole genome shotgun sequence.
ACCESSION   DASCQP010000504 DASCQP010000000
VERSION     DASCQP010000504.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4001)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4001)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4001
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001822266"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            176..1810
                     /locus_tag="QF480_08605"
     CDS             176..1810
                     /locus_tag="QF480_08605"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019581.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HJN06662.1"
                     /translation="MKIKSILFFLIISTTIMAQKTNVDLIVTNARIYTVNDSFDIVET
                     LVVKDGKFVATGTSAEILSKFSSDKIVDANNKFIYPGFNDGHSHFLGYGLSVTKYANL
                     VGTDSYDEVIERVVDHQIKYPSFWILGRGWDQNDWDEVSFPTNEELDEIFPDNPVVLT
                     RIDGHAVLINSKALKLAGINENSVVDGGEVKMKDGKPTGVLIDNAIDFIDHVIPEFSN
                     EDKMQAFKRAQQDCFDVGLTSVTDAGLEKDVILLIDQMHNNGQLDIRVYAMLSPTKEN
                     LDYFLKRGPIHNHKLTVSSVKLYADGALGSRGALLLEPYSDAPHTHGLQLSSQSYFDS
                     ICKMVYNAGFQVCTHAIGDSGNRIMLNSYAKFLKGKNDKRWRIEHAQVVEPSDLRFFS
                     DYSIIPSIQSTHCISDMYWADERLGSNRIKTAYAYADLLSENGWLINGTDFPVENISP
                     LLTYYAAVSRKDLSGWPESGFQKENALSREDALRSITIWPAKGSFDENEKGSIEIGKV
                     ADFVILDKDIMEISESEIPNTVVVATYIDGKMVNVK"
     gene            1862..2656
                     /locus_tag="QF480_08610"
     CDS             1862..2656
                     /locus_tag="QF480_08610"
                     /inference="COORDINATES: protein motif:HMM:NF024109.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HJN06663.1"
                     /translation="MTILKLHNRDIYYEQHGNGVPLILIAGLGSDSVSWLPVIIGLAK
                     HFKVITFDNRGVGRSSKDNSNISIKDMTDDCAVLINNLELSPVNVVGHSMGGMIAMDL
                     SIRYPKLVDKLILEATAPTMSNRNVEMLQDWVSFLKSGMDKKLWFRNMYYWIFSPSFF
                     SDKVMLDQYVDMAVRYRYAQSDNSFENQVVALSEFDCQNVLSEIKARTLVIYGEQDIL
                     FLTNETDQMFDTISDMDSVTIKNAAHSIHMDEPEVFIRNIVDFLAG"
     gene            2754..>4001
                     /locus_tag="QF480_08615"
     CDS             2754..>4001
                     /locus_tag="QF480_08615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018669465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HJN06664.1"
                     /translation="MQNIRNIAIIAHVDHGKTTLVDRMLHQVKLFRDNQEVGELILDS
                     NDLERERGITILSKNVSVRYKDVKINIIDTPGHSDFGGEVERVLNMADGVILLVDAFE
                     GPMPQTRFVLQKAIDLGLKPIVVINKVDKPNCRPDEVYEAVFDLMFNLGATEEQLDFP
                     VVYGSSKQGWMSSDWQKPTDNVAYLLDEIIEHIPPAIFNEGTPQMQITSMDYSSYVGR
                     IAVGKLQRGTIKMGMPVSLVKRDGTIVKQRIKELYLFEGLGKEKCKVEVNAGDIVAIM
                     GIEDFEIGDTIADIEEPEGLPAIKIDEPTMSMVFTINNSPFFGKEGKYVTSRHLRDRL
                     YHEIEKNLALKVEETNSSDSYQVFGRGILHLSILVETMRREGYEFQLGQPKVIIKEID
                     GRKHEPIENLTVLVPEDFSGKVID"
BASE COUNT         1355 a          590 c          818 g         1238 t
ORIGIN      
        1 cagtaaatta tgattaagta atattgattt aacaagtgta catagaattt aataatatta
       61 catcactatt cccctccctg gaggggctag gggtggatct ttcaaatttc aaattattca
      121 ccaaaataaa ataaaataat tagatattta ttatacatta atacatctat agcccatgaa
      181 aatcaaaagc attttattct ttttaattat atccacaact attatggctc aaaaaacaaa
      241 cgttgattta attgtcacta atgccagaat ctacaccgta aatgattcgt tcgatattgt
      301 ggaaactttg gtagtgaaag atggaaaatt tgtcgctaca ggaacgagcg cggaaatatt
      361 gtcaaaattc tcatcggata aaattgtaga tgctaataac aagtttatct atccaggatt
      421 taacgatggc catagccact ttctaggtta tggactttcg gtaacaaaat atgcaaactt
      481 agtgggtaca gattcatacg atgaagtaat tgagcgagta gtagatcatc agataaaata
      541 tcctagcttt tggatattag gcagaggttg ggaccaaaat gattgggatg aagtttcatt
      601 ccccacaaat gaggagttgg atgaaatatt tccagataat ccggttgttc taactcgtat
      661 tgacggacat gcagttctaa taaattctaa agcactaaaa cttgcaggta taaatgaaaa
      721 tagcgttgtt gatggtggtg aagtgaaaat gaaggatggc aaaccaacag gtgtattaat
      781 cgacaatgcc atcgacttca tagatcatgt tatccctgaa tttagcaatg aagataaaat
      841 gcaggcattt aaaagggctc agcaagattg ttttgatgtt ggtctcacat cggttacaga
      901 tgcaggacta gaaaaggatg taatactgtt gattgatcaa atgcataaca atggacagct
      961 ggatatacga gtgtatgcaa tgttaagtcc tacaaaagaa aatttagatt acttcttaaa
     1021 gaggggacca atacataatc ataaacttac cgttagttca gtcaaattat atgctgatgg
     1081 tgctcttgga tctcgtggag ctttgttatt ggaaccatat tcggatgctc ctcatactca
     1141 cggacttcaa ttgagttcac aatcatattt tgatagtata tgcaagatgg tatataatgc
     1201 agggtttcag gtttgtactc acgctattgg cgattccgga aacaggataa tgctaaattc
     1261 ctatgctaaa ttcctaaagg gtaaaaatga caaacgttgg cgaattgaac atgcccaggt
     1321 agttgaacct agtgatctta gatttttcag tgattattca ataatacctt ctattcagtc
     1381 aactcattgt atctcggata tgtattgggc tgatgaaagg ttgggatcga atagaatcaa
     1441 aaccgcgtat gcttatgctg atctattaag cgagaacgga tggcttatta atggtaccga
     1501 ttttcctgtt gaaaatatta gtccgttgct aacttattat gcagcagtga gcagaaagga
     1561 tctgtcaggt tggcctgaaa gtggattcca aaaggaaaac gcactgagta gggaggatgc
     1621 attacgttca attactatat ggcctgcaaa aggaagtttt gacgaaaatg agaaaggtag
     1681 tattgaaatc ggaaaggtag ctgactttgt aatacttgac aaggatatta tggaaatatc
     1741 tgagtcagaa attcctaaca cagtggttgt tgcaacatat attgatggta agatggtaaa
     1801 tgtgaaatga caattagatg attgaatcac ataactttta agttttctca attgtttcat
     1861 catgacaata ttaaaactcc ataatagaga tatttactac gaacaacatg gtaacggagt
     1921 ccctttaata cttattgcag gactcggctc tgattcggta agttggttac ctgtaatcat
     1981 tggtttggca aagcatttta aagtaatcac ttttgataat aggggagtgg gccgttcatc
     2041 aaaagataat tctaatattt ctatcaaaga tatgacggat gattgtgcgg ttttaatcaa
     2101 taatcttgaa ctatcgcctg taaatgtggt aggtcattca atgggaggca tgatcgctat
     2161 ggacttgtca ataagatatc ccaagcttgt tgataaactt attctcgaag ctactgctcc
     2221 aacaatgagt aatcgaaatg ttgaaatgct tcaagactgg gtatcttttt tgaaaagtgg
     2281 aatggataaa aaactttggt tcaggaatat gtactactgg atattttcac catctttttt
     2341 tagtgataaa gtgatgcttg atcaatatgt tgatatggct gttagatata gatatgctca
     2401 atctgataac tcatttgaga atcaagtagt tgctttgtca gaattcgatt gtcaaaatgt
     2461 attatctgag ataaaggcga gaactctagt tatttacgga gagcaggata ttttgttcct
     2521 aactaatgag acggatcaaa tgttcgatac tatctctgat atggattcag taaccattaa
     2581 aaacgcagcg cattcaattc atatggatga gcctgaagta tttataagaa atattgttga
     2641 tttcttagca ggttaattca ataaaagtta attaacgact tttattaatt gataaatttt
     2701 tcctatccaa ataaatatta cttttgcagc cccataataa aaatgcaaat aaaatgcaga
     2761 atatcaggaa tatagccatt attgcgcatg ttgatcatgg caaaactaca cttgtggaca
     2821 ggatgcttca tcaggtaaaa cttttcagag acaaccagga agttggagag ttaatattag
     2881 acagtaatga tcttgaaaga gaaagaggaa ttacaatact ttcaaaaaat gtatctgtac
     2941 gatataaaga tgtcaagatt aatattattg atacccccgg tcactctgat tttggtggtg
     3001 aggttgaacg tgtattaaat atggcagatg gtgttatact acttgtggat gcatttgaag
     3061 gacctatgcc gcaaactagg tttgttctcc aaaaagctat cgatctgggt ttgaaaccga
     3121 ttgttgtaat aaataaagtt gacaaaccaa attgtcgtcc cgatgaagtt tatgaagctg
     3181 ttttcgattt aatgtttaat ctgggagcta cagaagaaca gctcgatttt cctgtagttt
     3241 atggatcatc aaaacaaggg tggatgtcaa gcgattggca gaaaccaacc gataacgtag
     3301 cttatttatt ggatgagata atcgagcata ttcctcctgc aatatttaat gaaggtactc
     3361 cacaaatgca gataacatca atggattact catcttacgt tggtaggata gcggttggaa
     3421 aattacagcg tggaacaata aagatgggga tgcccgtttc gttggttaaa agggatggaa
     3481 caattgttaa acaaagaata aaagagctat atctttttga gggacttgga aaggagaaat
     3541 gtaaagtaga agttaatgcc ggcgatattg tagctataat gggtatcgaa gattttgaga
     3601 ttggtgatac tattgcagat atagaagaac cagaaggatt gcctgcaatt aaaattgatg
     3661 aaccaacaat gagtatggtt tttacaataa ataattctcc attttttggt aaagaaggaa
     3721 aatatgtaac atcccgacat ttacgtgaca gactttatca tgagatagaa aagaatcttg
     3781 ccttgaaagt tgaagagaca aactcctctg attcatacca ggtatttggc agaggaattc
     3841 ttcatttgtc tattcttgtt gaaactatgc gccgagaagg ttatgaattt caacttgggc
     3901 aaccaaaagt aattattaaa gagattgatg gacggaaaca tgaaccaatt gaaaacctta
     3961 cagttcttgt acccgaagat ttctcaggaa aggttataga t
//
LOCUS       DASCQP010000505         6322 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001831395, whole genome shotgun sequence.
ACCESSION   DASCQP010000505 DASCQP010000000
VERSION     DASCQP010000505.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 6322)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6322)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6322
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001831395"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..2122
                     /locus_tag="QF480_08620"
     CDS             <1..2122
                     /locus_tag="QF480_08620"
                     /inference="COORDINATES: protein motif:HMM:NF024724.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HJN06665.1"
                     /translation="YSLPTVDKVSLKLAFEIASDVYRNEVTKDGKPLIIYNIDIAIIV
                     MKEIGLGPTSAICALLHGINLKTDYTLDKIKSDFGEHVTEIIKGFNAVGELGTERISL
                     HSEELRTLFVSMVDDVRVILIRLAHRLNDVRQIDILGENKEQFIDEVKYLYTPIAHRL
                     GLYKVKAEFEECVMKHKHPKIYEEISNKIQQTKAKREVYIQDFIRPVERDLLRHKFNF
                     EVKWRTKSVPSIWAKMMRQDVVFEEVYDLFAVRIVVNGKLKKEKEDCWRVYSHITNIY
                     APNPKRLRDWISTPKPNGYESLHTTVMGPNGKWIEVQIRTVRMDDEAEKGHAAHWQYK
                     GALKKKNTENWLSQVRDILENPDQIIQDKLYKSNHGKQNDSVFVFTPLGDLKQLPIGS
                     TVLDFAFGIHTDIGVKCRGAKINNKVVPIRYILKNGDKVDILTAKNQTPKLDWLSFVT
                     TDKARIRIKRQLKEDKYKEADIGKSLLLRKFKNWKIKSNDDLINLLVKHYKLDASIDL
                     YYLVATEKIDLLEIKGLLQEYDKIDNRKKQETPENGIVQKENKEDNDANDVWYVGENL
                     KNIDYRIAKCCNPIPGDNVFGFITTHGGITIHRTTCPNAKRLKEKYEYRVLEIKWLTS
                     GGDSFSTANLRITGEDELGVVGSITKVITDDLRVNMRSINFQTMGSKFVGKVSVRIKN
                     NDHLDQLIHKINKVKGVDKAIRIK"
     gene            complement(2216..2920)
                     /locus_tag="QF480_08625"
     CDS             complement(2216..2920)
                     /locus_tag="QF480_08625"
                     /inference="COORDINATES: protein motif:HMM:NF012301.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HJN06666.1"
                     /translation="MKRKNYKLLLVEDDINFGAVLKSYLELNDFSVDWVDDGKEAMPK
                     FESNAYDLVLLDVMLPNVDGFSIANNIKKADSNVPFIFITAKTLRNDIVEGYKTGADD
                     YITKPFDSEILLYKIKAVLSRGISGNIGQNIEIFPINNFNFNYKTRSLSYKVDSDKQT
                     LSPKECELLKMLLEQKGEILPKAVALNTIWGDANYFTSRSMDVYVAKLRKLLSRDKQI
                     KIITHHGAGYRLVTDE"
     gene            complement(2937..4613)
                     /locus_tag="QF480_08630"
     CDS             complement(2937..4613)
                     /locus_tag="QF480_08630"
                     /inference="COORDINATES: protein motif:HMM:NF014567.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HJN06667.1"
                     /translation="MIISLFGLIFIQWLWIKYAIETEKARFDLLVYESMKSALAKVER
                     KKVYDFIDEKIELPKPSIIKSETLEELTKISEVISVIEVPKISNLKYKIDFDDKTQDY
                     IDLLSDLDTISLLAPKKYNHKDDVYFLDNEAQIIKKDLKEMEHDIIHIEDKHEYMMFF
                     KNKDSLKRILDIERDKLRVEKEELVKHKIEIFNENIEQWVLEYSLEDNINYLKDRMLK
                     YNHHISDALENNGINITFNYQLIKEENDTTIVVSSSTEDSELLPDKYRTEVYPDDIFT
                     KNLYLVISFPGKNAHIYKKVYILVIGSVIFTLIIILTFGSTLYYILKQKKLSEIKSDF
                     INNMTHEFKTPIATIGLAADALESPKVMGVEKSTVYYLKIIRQENKRMNNQVERVLQM
                     ALIEQGKLQIALQETDVHEIIQNCVDVAKFSIKKNVGKISSSLRATNFILNIDEVHFA
                     NVMNNLFDNAIKYTNKTPDILVETYNQQNMLCIRVSDNGVGMTKDVQMHIFDKFYRKP
                     MGNIHNIKGFGLGLSYVKAVIEAHKGSISVKSEPDNGSTFTIMLNCMTEQ"
     gene            4799..5785
                     /locus_tag="QF480_08635"
     CDS             4799..5785
                     /locus_tag="QF480_08635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06668.1"
                     /translation="MNKPVIIAIIATLVMMISFPVNVLSQEKEKEVKVKTVKMVDGKK
                     VVKDTTFTVKDGENEPDIIRTLSWVSEKDSAGYITIDLEMDSIGGKDGHNNVFIFKSG
                     KDGGKKYKYFFSDDDLKDCEHSIQVLEDFDFEFDESKLKEIELKLAEHKDKLHDMRIK
                     FDGENLVMLKELEKIKEFEELENLEEIIELKHLQKIKEFENIDIHIPEISYFPNHHDY
                     FIDSHHMHDNVSDKELRDAGIKNKPNKLELTDYDITIDDGVVGLSFVLVSEGTPKITV
                     FNYFGDKVFSGKPELMNGKYVIRIDLSAKQNGVYYLQATQKNSSFTKKLRIH"
     gene            complement(5811..>6322)
                     /locus_tag="QF480_08640"
     CDS             complement(5811..>6322)
                     /locus_tag="QF480_08640"
                     /inference="COORDINATES: protein motif:HMM:NF013718.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HJN06669.1"
                     /translation="GSGVYPAILFGGYYIYGLAAKNKRARQIALGETQAFIMAALSSQ
                     VLKHIFHRQRPNQNNPPNPYLWEGPFTGFNYTSFPSGHTTAAFAIASMMSLVYKDKIW
                     VGILSYGLATGVGLSRVYDNKHWPSDVLVGAALGYAIGRTVYSIMSQESKFTMGISNT
                     GVSVAYRIE"
BASE COUNT         2150 a          973 c         1089 g         2110 t
ORIGIN      
        1 gtactcttta ccaactgttg ataaagtttc tctaaagctt gcctttgaga ttgcatctga
       61 tgtttaccgt aatgaggtaa caaaagacgg caagccttta ataatttata acattgatat
      121 tgcgatcatt gttatgaaag aaattggact tggtccaaca tctgcaattt gtgcattact
      181 acatggtatt aatttaaaaa ctgattacac tcttgataag attaaaagtg attttggtga
      241 acatgttact gaaataatta aaggttttaa tgccgttggt gaacttggta ctgaacgtat
      301 ttctcttcat tctgaggaac ttcgaacatt atttgtgtca atggttgatg acgtgagagt
      361 aatacttata agattagcgc atcgcttaaa cgacgtccgt cagattgata tcctaggaga
      421 gaataaagag caatttattg atgaggttaa atacctatat actccaattg ctcacagatt
      481 aggtttatat aaagtgaagg ctgagtttga agaatgtgtt atgaaacaca agcatcccaa
      541 gatttatgag gagataagta ataaaatcca gcagaccaaa gcaaaacgtg aagtatatat
      601 tcaggatttt attagacctg ttgaaagaga tttgctcaga cataagttta attttgaggt
      661 taaatggcgc actaaatcag tgccatctat ttgggctaaa atgatgagac aagatgttgt
      721 atttgaagag gtttatgatt tgtttgctgt tcgtatcgta gtaaatggaa aattaaaaaa
      781 ggaaaaagaa gattgctgga gagtttattc acacattact aatatttatg cacccaatcc
      841 aaaacgatta cgtgattgga tatcaacacc taaacctaat ggctatgagt cgttacatac
      901 gacggttatg ggtcctaatg gaaaatggat cgaagtacaa attaggactg taagaatgga
      961 tgatgaagct gaaaagggtc atgctgcgca ttggcagtat aaaggtgcgc taaaaaagaa
     1021 gaacactgaa aattggcttt cacaggttcg tgatatttta gaaaatcctg atcagattat
     1081 tcaagataaa ttatacaaaa gtaatcacgg aaagcaaaat gatagtgttt ttgtttttac
     1141 ccctcttggt gatctaaaac agcttccaat tggatcaacc gtactagatt ttgcttttgg
     1201 tatacatact gatattggcg tcaaatgtcg tggggcaaaa attaataata aagttgttcc
     1261 tatcagatat atccttaaaa acggtgataa ggttgacata ttaactgcta aaaatcaaac
     1321 accaaaactc gactggcttt catttgttac aactgataag gcacgtatcc ggataaaacg
     1381 tcagctaaaa gaagataaat ataaagaagc cgatattggt aaatcattgt tattacgaaa
     1441 atttaaaaac tggaagatta aaagtaatga tgatctaata aatcttcttg taaagcatta
     1501 taagttggat gctagtattg atttgtatta tttagttgct accgagaaaa tagatctgtt
     1561 agagattaaa ggtttattac aggaatatga taagattgat aatagaaaga aacaagaaac
     1621 ccctgaaaat ggaattgtcc aaaaggagaa taaagaagac aatgacgcaa atgatgtttg
     1681 gtatgttggt gaaaacctta agaatattga ttatcgtata gccaaatgct gtaatcctat
     1741 tcctggtgac aacgtattcg gttttataac aacgcatggg ggcattacaa tacatagaac
     1801 aacttgccct aatgccaaaa gattgaaaga aaagtatgaa tatcgtgtac ttgaaataaa
     1861 atggttaact tctggcggtg acagtttctc aactgctaac ttgcgtataa ctggtgagga
     1921 tgaattaggg gttgtaggat caataacaaa agtaataact gatgacttga gggttaatat
     1981 gcgatcaatt aattttcaaa ctatgggtag taagtttgtt ggcaaagtaa gtgtcaggat
     2041 taaaaataac gatcacttgg atcagcttat tcataaaata aacaaagtta aaggtgtgga
     2101 taaagcgatt aggattaagt gatttagcca atgaaattat gtaaccatat gattacatta
     2161 gaaaagagaa caagttctta atagcaaaga ctgatttaag gccaatttaa tccaattatt
     2221 catcggttac taatctataa ccagctccat ggtgagtaat aatttttatt tgtttatcac
     2281 gcgaaagaag ctttctgagt ttagcaacat atacatccat acttctgcta gtgaaataat
     2341 tagcatcacc ccatattgta tttaaggcaa ctgctttagg aagtatttcg cctttctgct
     2401 caagcagcat ttttaacaac tcacattcct tgggagaaag cgtttgttta tcactatcga
     2461 ctttatacga caagctcctt gttttatagt taaaattaaa attattaatt ggaaaaattt
     2521 caatgttttg gcctatatta cctgaaattc ctctacttag aactgccttt attttgtaaa
     2581 gcaatatctc cgaatcaaat ggctttgtaa tataatcatc agctccggtt ttataccctt
     2641 caacaatatc gtttcttaaa gtttttgcag taataaatat aaaaggaaca tttgaatcag
     2701 ctttttttat attgttagcg attgagaagc cgtcaacatt aggtagcata acatctaaaa
     2761 gcacaaggtc gtaagcatta gactcaaatt ttggcattgc ctcttttcca tcatcaaccc
     2821 aatcaaccga aaaatcgttt aattcgagat atgattttaa cacagcgcca aaattgatgt
     2881 cgtcctcaac aagtagaagt ttgtaatttt tccttttcat cccacaatct tataatttat
     2941 tgctctgtca tacaatttaa cataattgta aaagtgcttc cattgtcagg ctcactcttt
     3001 acacttatgc tacctttatg tgcttcaata acagctttaa catagctgag gcctaaacca
     3061 aaacccttaa tattatgaat attccccatt ggtttcctgt aaaatttatc aaatatatgc
     3121 atttgtacgt ccttggtcat tcctacaccg ttatctgaaa cacgaatgca caacatattt
     3181 tgttgattat aagtttcaac aagtatatct ggcgttttat tagtatattt tattgcatta
     3241 tcaaacaagt tattcatcac atttgcaaaa tgaacctcat caatatttaa tataaaatta
     3301 gttgctctga gtgaagatga tattttccca acattctttt taatagaaaa tttagcaaca
     3361 tctacgcagt tttgaataat ttcgtgtaca tcagtttctt gcaaggctat ctgtagtttt
     3421 ccttgttcaa tcaaagccat ttggagcact ctttcaacct ggttgttcat gcgtttattt
     3481 tcctgtctaa taattttcaa gtagtaaaca gtagattttt caacacccat tacttttgga
     3541 gattcgagtg catcggcagc gagtccaatt gtagcaattg gggttttaaa ttcgtgtgtc
     3601 atattattta taaaatccga ctttatttca cttaattttt tctgtttcaa aatatagtaa
     3661 agtgttgaac caaatgttaa tattattata agagtgaaaa tgacagatcc aataaccaat
     3721 atgtaaacct tcttgtaaat gtgtgcattt tttccaggaa aggaaattac taagtacaag
     3781 tttttggtaa aaatatcatc aggatatact tctgttctat atttgtcagg caacaattca
     3841 gaatcctcag tagatgaaga aacaacaatt gttgtatcat tttcttcttt aattaattga
     3901 taattaaaag tgatgttaat tccattattt tctaacgcat ctgagatatg atgattgtat
     3961 ttgagcattc tgtctttcaa atagttaata ttatcttcta aactatattc cagtacccat
     4021 tgctcaatgt tttcattaaa gatttctatt ttgtgtttta ccaattcttc tttttcaacc
     4081 cgaagcttgt ccctttctat atcgagtatc cgttttagag aatctttgtt tttaaaaaac
     4141 atcatatatt catgcttatc ctcaatatgt ataatatcat gttccatttc tttcaaatct
     4201 ttcttgataa tttgtgcctc attatcaaga aagtagacat catctttgtg gttatatttt
     4261 ttaggagcta ataagctaat agtatcgagg tcactcaata agtcaatata atcttgagtt
     4321 ttgtcatcaa aatctatctt gtacttaaga tttgagattt taggcacctc aataactgat
     4381 atcacttctg aaattttagt taactcttct aaagtctcgg acttaatgat tgaaggtttc
     4441 gggagctcaa tcttttcatc aataaaatca tatacttttt tgcgttctac ttttgcaagt
     4501 gctgatttca ttgattcgta aaccagtaag tcgaatcgtg ctttttctgt ttcaatagca
     4561 tattttatcc ataaccactg aataaagatc aatccgaata ggctgatgat cattaaaaat
     4621 aatattattt ggaaacgttt tttcatttaa ttttatcata tcgcaggtca aaagtaataa
     4681 atacaagtac tatgattttt aactttaacc tttctttaac cttttttaac ccgtcttaac
     4741 ttatgcataa ttaatgctta gatacatttg tatccataac cttttaaaat ttaaagaaat
     4801 gaataaacca gtaattattg caataattgc aacattagta atgatgattt cctttcctgt
     4861 aaacgtttta agtcaagaga aagagaaaga agtaaaggtt aaaactgtta aaatggttga
     4921 tgggaagaag gtagttaaag acactacatt tactgttaaa gatggtgaaa acgagccaga
     4981 tattataaga actttgtcat gggtctcaga aaaagattca gcaggttata taactataga
     5041 tcttgaaatg gattcaattg gtggcaaaga tggtcataac aacgttttta ttttcaaaag
     5101 tggtaaagat ggtggtaaaa aatacaagta ttttttcagt gacgatgatc ttaaagattg
     5161 tgaacatagt attcaggttc ttgaggattt tgactttgaa tttgacgaaa gcaaattaaa
     5221 agagattgaa cttaagcttg ctgagcacaa agataagtta cacgatatga ggatcaagtt
     5281 tgacggagag aatttagtaa tgctgaagga acttgaaaaa attaaagaat tcgaggaact
     5341 tgaaaatctc gaagaaatta ttgagttaaa gcacctgcaa aagattaagg agtttgaaaa
     5401 tattgacatc catattccgg aaatatcata tttcccaaat caccatgatt attttattga
     5461 tagtcatcat atgcatgata atgtaagcga taaggaattg cgtgatgctg gtatcaagaa
     5521 caaacccaat aagcttgaat taactgacta cgacataact attgatgatg gtgtagttgg
     5581 actttcattt gtcttagtta gtgagggtac accaaaaatt acagtattta attattttgg
     5641 cgataaagtt ttttcgggta aacccgagtt gatgaatggt aaatatgtaa taaggattga
     5701 ccttagtgcc aagcaaaatg gagtatatta tttgcaggcc acacaaaaga atagttcatt
     5761 cacaaaaaag ttgagaatac attaactaaa ataatcattg tataagagta tcactcaatt
     5821 cggtatgcaa cagaaacacc ggtattggag atacccatag tgaatttgga ttcctgagac
     5881 attatgctat aaacagttcg tccgatagca tatcccaagg ctgccccaac taagacatca
     5941 gatggccaat gtttattgtc ataaacgcgc gaaagcccaa cacctgtagc tagtccatat
     6001 gacaatattc caacccagat tttgtctttg taaaccaatg acatcatcga tgcaattgcg
     6061 aatgcagctg ttgtatgtcc tgaaggaaat gatgtatagt taaaccctgt aaaggggcct
     6121 tcccacaagt atggatttgg aggattattt tgattgggtc tttgtcgatg aaaaatatgt
     6181 tttaacacct gtgatgataa tgctgccata ataaatgcct gagtttcgcc aagtgctatt
     6241 tggcgggctc gtttgttttt agcagcaagt ccgtaaatat agtatccccc gaataaaatt
     6301 gctggataca ccccacttcc cc
//
LOCUS       DASCQP010000506         2527 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001838087, whole genome shotgun sequence.
ACCESSION   DASCQP010000506 DASCQP010000000
VERSION     DASCQP010000506.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2527)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2527)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2527
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001838087"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2527)
                     /locus_tag="QF480_08645"
     CDS             complement(<1..>2527)
                     /locus_tag="QF480_08645"
                     /inference="COORDINATES: protein motif:HMM:NF013069.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HJN06670.1"
                     /translation="LLGGLLAIFILWVFLRNLKLVIAVALAIPISVFTAFNFFYAYDV
                     TINSLTLLGMALAIGMLLDNSVVVLENIYRLAAKNVDTATAVIQGTKEVARSIIAATL
                     TTVTVFLPFVFSTNFFIGLLGKHIGVSIISTLLVSLAVALLFIPMITYVFLSLKKVSN
                     TAIFQRISHHNRLIQIYLVFLKTSMRNPARVIPGALGVFFIALLISLGISTFSSEEPE
                     IKDLKLYVTMPSGTTLENTDLLIADVENKLDSLKEKKDILSQIYEEEAVITVTLSDDY
                     RDIRNMDVPGIKDDIIESLEDFKQARFDWDPPATGRRFGSGGFDDDDGMARILGIGLQ
                     QEKVIVKGQDFDQMLNKAQDIEYFLGQLSSIKNINIRQPAKRPEVQLIFDKQLMSLYD
                     IPVTSVLSELNSFQPEFSSGVFFKQGNQDYDIQIKMPNIDENITSRNIHDLKTLNVKG
                     ASGSVFELQNISNFNFTTGLSTIKRTNQEKRIEIVYEFLDEVNDEKDILEASRAEVDD
                     LIASISMSSDEIVEVIHEDSALGEFGFLLLMAVLLIYMILASVFESFTMPIVMMFSIP
                     LAAIGSLILLILTGTSIMNANVFTGFLILLGIVVNNGIIMIDYTRILQKRGYRESRAL
                     MTAGLARVRPILITAITTIIALIPLAMGKAEYVTQIGVPFAITVIGGLALSTILTLVF
                     IPTFYSGLKSSISWMKEQNILIKIIQAILWIVGTYIIYMEVDSKVWQLIYFLLLIITV
                     PASIYFIKTSLRKANEKLIGDNQPLRIEIRNIVKIYDWDNRFMREWKSGLNIRKRLGI
                     QNSTTTTNIFAQLLWQLPVIAFSYYFIYYHLESGFWYFILQIV"
BASE COUNT          836 a          478 c          406 g          807 t
ORIGIN      
        1 aaaacgatct gtaatataaa ataccaaaat ccactttcga gatggtaata aataaagtaa
       61 tatgagaatg ctattacagg tagttgccat aaaagttgag caaatatatt tgtagtagtt
      121 gtagaatttt gaataccaag ccgctttcta atatttaatc ctgatttcca ttcacgcata
      181 aaacgattat cccagtcgta aatttttaca atattgcgta tctctattcg cagaggttga
      241 ttatcaccaa tgagcttttc gtttgctttt ctcagacttg tttttatgaa gtatattgat
      301 gcaggaacag ttattattaa taagagaaaa tagattaact gccatacctt actgtcaacc
      361 tccatataaa taatgtatgt gccaacaatc caaagtatag cttgtattat cttaattaaa
      421 atattctgct ccttcatcca gctaatggac gatttaaggc ctgaataaaa tgttggaatg
      481 aaaacaagtg ttagtattgt acttaaggct aaacctccaa taacagttat tgcaaaagga
      541 acacctattt gagtaacata ttcagccttt cccattgcca atggtattaa tgcaataatt
      601 gtggtaattg ctgtaatcag aattggtctt actcttgcca atcctgctgt cattaaagct
      661 cttgattcac ggtaaccccg tttctgaagt atccgtgtat aatcgatcat aattatgcca
      721 ttattaacta caattccaag caatattaag aaaccggtaa acacattggc attcattatt
      781 gaagtaccgg taagtataag caatatcagt gaaccaattg ctgcaagtgg aattgaaaac
      841 atcattacaa tcggcattgt aaacgattcg aaaacagaag caaggatcat gtatattaac
      901 aatacagcca ttaacaataa aaagccaaat tctccaagtg cactatcctc gtgtataact
      961 tcaacaatct catctgaact catgctaata ctggcaataa gatcatccac ttctgctcta
     1021 gaagcttcaa gaatatcctt ctcatcatta acttcatcca agaattcata aacaatctca
     1081 attcgctttt cctgattagt acgcttgatt gttgagagtc ccgtggtgaa gttaaaattg
     1141 ctgatatttt gtagttcaaa tactgagcca ctagcaccct ttacattgag tgtcttcagg
     1201 tcgtgaatat ttctgctagt gatattttcg tcaatatttg gcattttgat ttgaatatca
     1261 tagtcctgat ttccttgttt aaagaataca ccacttgaaa attcaggctg aaatgaatta
     1321 agttctgata atacagatgt taccggaata tcgtataatg acatgagttg tttgtcgaaa
     1381 attaactgta cttcaggtcg tttagcaggc tgcctaatat tgatgttttt gatggaagaa
     1441 agctgtccca gaaaatactc aatgtcctgt gctttattaa gcatttgatc aaagtcctgt
     1501 cctttgacaa taactttttc ctgctgtaaa ccgattccca atattcttgc catgccgtca
     1561 tcatcatcaa aaccgccact tccaaatctt ctaccagttg ccggtggatc ccagtcaaat
     1621 cttgcttgtt tgaaatcttc caaactttca attatatcat ctttaatacc aggaacatcc
     1681 atgtttctaa tatccctgta atcatctgac agagtaacag ttattacagc ctcctcctca
     1741 taaatctggc ttaggatatc tttcttttcc tttagactgt cgagtttatt ctctacatca
     1801 gcaattaaca gatcggtatt ttccaaagtt gttccactcg gcattgtgac ataaagtttg
     1861 agatccttta tttccggttc ttcagaagaa aaagtactta tgcccaagct tattagtagt
     1921 gctatgaaaa atacacccag cgctcctgga attactctgg cgggattacg catactcgtt
     1981 ttcagaaaga ccagatatat ttgaattaac ctgttgtgat gtgatatacg ttggaaaata
     2041 gctgtatttg aaactttctt caaactaagg aaaacataag ttatcattgg aataaaaagc
     2101 agtgcaactg caagtgaaac caatagagtt gaaattattg agaccccaat atgtttaccc
     2161 aacaatccga taaagaaatt tgttgaaaat acaaaaggaa gaaatacagt aaccgtagtt
     2221 aaagtggcag cgattattga acgtgcaact tcttttgttc cttgaataac cgctgtggct
     2281 gtgtcaacat ttttcgccgc caaacgatat atattttcaa gtactacaac actattatct
     2341 aacaacattc ctatagcgag tgccatacca agaagagtta agctgttgat agtaacatcg
     2401 tatgcataaa agaagttaaa tgctgtaaat acagaaatag ggattgccaa tgctacagca
     2461 attacaagtt tgagatttct cagaaaaacc caaaggataa atattgctaa caaacctcca
     2521 agaagag
//
LOCUS       DASCQP010000507         3451 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001839293, whole genome shotgun sequence.
ACCESSION   DASCQP010000507 DASCQP010000000
VERSION     DASCQP010000507.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3451)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3451)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3451
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001839293"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            100..996
                     /locus_tag="QF480_08650"
     CDS             100..996
                     /locus_tag="QF480_08650"
                     /inference="COORDINATES: protein motif:HMM:NF013134.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HJN06671.1"
                     /translation="MYISDFNYFRPKSIKEATTLLENSDDGAPIAGGTDLLVEIKQGL
                     RHHEDIISLTDIEELKIISEVPEGIFLGAGLTHNELISSTIIINKLPAIAQAASKIGC
                     DQVRNKGTIGGNICTAASCCDLGPVLLTLNASVELASSVETRTVPLIDFFVFHRKTTI
                     KKGELVTRIFVPHPEPYTGVYFEKFGLREAAAVSVASVAVMVKLHEGVCDDACIVIGA
                     VAPTPKISNRSIDHIVGKDISLLSEDSQILMQAGNAAAEDAIPIDDIRGGANYRRDLI
                     KVLTRRAIVKAIDLAQLNHEDK"
     gene            993..>3451
                     /locus_tag="QF480_08655"
     CDS             993..>3451
                     /locus_tag="QF480_08655"
                     /inference="COORDINATES: protein motif:HMM:NF014758.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HJN06672.1"
                     /translation="MKHIININVNGDDREVAVRSGATLLDVLRDDLRLTGTKKGCGLG
                     DCGACTVILDGKSVNSCLILALEADGKKIETIEGLSGRKKLHPIQQAFVEKGAIQCGY
                     CTPGMIMQVKAVLDENPNPSEEEIKKALSGNLCRCTGYTKIIEAVESAKAYMNGEEQK
                     KIEFQPQKSALDLSVVGKRLPKIDAPDKATGKALYTDDITLNNMLYGKLLLSPVPHAK
                     IKSIDTKQALELPGVKAIMTGDDVPDVMWGTSPPRYDENVLAKNKVRFVGDVVAAVAA
                     VDEETCYKALELIKVEYEELPAVFDPMEAMKDGAPRLFDDKYENNINTRIDHHFGDID
                     KGFADADHIREERFVGNRTYQNPMEPHCSIAEWDNHGRVTLHTSTQVVHYVHHQLSRI
                     LSLPLGDIRVIMTHCGGGFGAKAATTTIEVMSCFLAKETGCPVKMRFTREEMYLFGRG
                     RHKQYIDMKIGVKNDGTITAVKQKAVLEGGAYSSFGIVSAYYAGSMLTTLYKFDNYKY
                     DGYRVNTNLPPCGAFRGHGCPHPRFAFESLLSMIANDIGMDPIDIRLKNAMEPEYHTC
                     NDLDIHSCEFTACIEDVKKKSDWDKKRGTLPKGRGIGIGCGGFVSGAGYPIYRSQFPH
                     SNAIIKILEDGSKAVLFIGDADIGQGSDTVLAMAACEAMGITFDRISVVSADSDLTPI
                     GFGAYSSRVTLMGGNACKMAGEEIKKQILKAASEILKVDESLLEAKENKIYVKDNPKI
                     SIPWEDAGVAHFSNKGPLVGKGHYSPPKGLGGKYKGAAVGTTPAYSFSASVCEVDVDM
                     DTGKVKVLNFWDAHDCGTAIDP"
BASE COUNT         1121 a          583 c          788 g          959 t
ORIGIN      
        1 atgacataca tcttctgatt accggttttg atattactgg agagaatgcc tttgtataac
       61 ataacccata atagctagaa aaaaactaca gataacataa tgtatatttc agattttaat
      121 tatttcagac ccaaatcaat aaaagaagcg actacattgc ttgagaacag cgatgatgga
      181 gcacctattg ctggtggaac agatttgttg gttgaaatta aacaaggact cagacatcat
      241 gaagatatta tctcgctcac tgatattgaa gagttaaaaa tcatcagcga agttcctgaa
      301 ggcattttcc ttggagcggg attaactcat aatgagctga tatcatcaac aataataata
      361 aacaaattac ctgctatagc tcaggctgct tcaaaaatag gctgtgatca ggttcgaaat
      421 aaaggaacaa tcggtgggaa catttgcacg gcagcttcct gttgtgactt gggtccggtt
      481 ttattaactc tcaatgccag tgtggaactt gcaagttctg ttgaaacacg aactgtacca
      541 ctaatagatt tttttgtttt tcaccggaaa accacaataa aaaagggaga acttgtaacg
      601 aggatttttg ttcctcatcc tgagccatac actggagtat attttgaaaa attcggacta
      661 agagaagctg cagctgtatc cgttgcttcg gtagctgtga tggtaaaatt acatgaagga
      721 gtgtgtgatg atgcatgcat agttattggt gcagttgcac caacaccaaa aataagtaat
      781 agatcaatcg accatatagt aggtaaagac atttcacttc tttcagaaga ctcacaaatt
      841 ctaatgcaag ctggaaatgc agctgcagaa gatgcaattc ctatcgatga tatcaggggt
      901 ggtgcaaatt acaggagaga tctaataaaa gttcttactc gcagagcaat tgttaaggct
      961 atagatctgg cgcaattaaa tcatgaagat aaatgaagca cataataaat ataaatgtaa
     1021 acggggatga tcgggaggta gcagtcagat ctggtgcaac actactcgat gtactaagag
     1081 atgatctacg acttactggt actaaaaagg ggtgtggact tggagattgt ggagcatgta
     1141 ctgtaattct tgacggaaag tcagtaaatt catgtcttat actggctctt gaggctgatg
     1201 gtaaaaagat agaaacaatt gaaggtctgt caggcaggaa gaaacttcat ccaatacaac
     1261 aggcttttgt tgaaaaagga gctattcaat gtggatattg tactcccggg atgataatgc
     1321 aggtaaaagc tgttctggat gaaaatccca acccttcaga agaggagata aaaaaagcct
     1381 taagtggcaa tttgtgtcga tgtaccggat atactaaaat aatagaagct gttgagtccg
     1441 ctaaagcata catgaatggt gaggaacaga agaaaataga atttcaacct caaaaatcag
     1501 cactggattt gtcagttgtt ggaaagcgtc ttcccaagat tgatgcccct gataaagcaa
     1561 caggtaaagc actttacaca gatgatatta cccttaataa tatgttatat gggaaattac
     1621 ttctaagtcc tgttcctcac gctaagatta aatcaataga cactaaacaa gctttagagc
     1681 tacctggtgt aaaggcgata atgacaggtg atgatgtccc ggatgttatg tggggaacct
     1741 cccctccacg ttatgatgaa aatgtgttgg ctaaaaataa ggtaagattt gtgggtgatg
     1801 ttgtagcggc tgttgctgct gtggatgaag aaacatgtta caaggcttta gaactgatca
     1861 aagtggaata tgaggaactt ccggcagtat ttgatccgat ggaagcaatg aaggatggtg
     1921 caccaaggct ttttgatgac aaatatgaaa acaatatcaa tactcgtata gatcatcatt
     1981 ttggtgatat tgacaaaggg ttcgctgatg ctgatcacat tcgggaagaa cgtttcgttg
     2041 gtaatagaac atatcaaaat ccaatggaac cacattgctc tattgctgag tgggataacc
     2101 atgggagagt tacgttacat acatcaactc aggtggttca ttatgtacat catcaacttt
     2161 caagaatatt aagcctgcct ttaggcgata taagggttat catgacacat tgtggaggag
     2221 gttttggtgc aaaggcagca accacaacca ttgaagtcat gtcatgtttt cttgccaaag
     2281 aaacaggatg ccctgtaaag atgagattta cccgggaaga aatgtatctt ttcggtagag
     2341 gaaggcacaa gcaatatatc gacatgaaga taggcgtgaa aaatgacggg acaattactg
     2401 ctgttaagca aaaagcggtt cttgaaggtg gtgcttattc aagttttgga attgtgtctg
     2461 cttattatgc cggttcaatg cttactactc tttataaatt tgataactac aaatacgacg
     2521 gatacagggt aaatactaac ctcccacctt gtggtgcttt taggggccat ggatgtcctc
     2581 accccagatt tgcatttgaa tcgttgttgt cgatgatcgc gaatgatata ggcatggacc
     2641 caatcgacat acgactgaaa aatgcaatgg aaccagaata tcatacttgc aatgatcttg
     2701 atatccattc gtgtgaattt actgcgtgta ttgaagatgt aaagaaaaaa tcagattggg
     2761 ataaaaagag gggaaccctt cccaaaggca gaggcattgg aattggttgt ggcggatttg
     2821 tctcaggggc tgggtatccg atatatagat cccaatttcc tcattccaat gcaatcatta
     2881 aaattttgga agatggttcc aaagcggttc tattcatcgg tgatgctgat attggccaag
     2941 gttcggatac agttcttgct atggcggcat gtgaggcaat gggaataaca tttgacagga
     3001 ttagtgttgt atcagctgat agcgacctta ctccaattgg ctttggtgca tattcaagcc
     3061 gcgtgacttt aatgggtgga aatgcatgta aaatggccgg tgaggaaatt aaaaaacaaa
     3121 tactcaaagc cgcatccgag attctaaaag tagacgaaag tcttttggag gctaaggaga
     3181 ataaaattta cgtgaaagat aatccgaaga tatcaatacc atgggaagat gctggagttg
     3241 cacatttttc taataaaggt ccacttgtag gaaaagggca ttactctcct cctaaaggcc
     3301 ttggcggtaa atataaagga gccgctgtag gtacaactcc ggcatattca ttttcagcaa
     3361 gtgtttgcga agtcgatgtt gacatggaca caggcaaagt taaagttctt aatttttggg
     3421 atgctcacga ctgtggaact gcaatagatc c
//
LOCUS       DASCQP010000508         5962 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001842816, whole genome shotgun sequence.
ACCESSION   DASCQP010000508 DASCQP010000000
VERSION     DASCQP010000508.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 5962)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5962)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5962
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001842816"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            181..627
                     /locus_tag="QF480_08660"
     CDS             181..627
                     /locus_tag="QF480_08660"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF012478.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HJN06673.1"
                     /translation="MNISPNSIAALSYTLTNNTTDEELEKTPEDKMMKFKFGIGELLP
                     GFEKNLMGLKKGNKFDFIIVSNDAYGPVDPYAVFDIPMDTFEVDGKINEQMLTIGNKI
                     PMTDNDGNKHVGLITLVMESAVTMDFNHPLAGVDLRFVGEVLEVLE"
     gene            721..1371
                     /locus_tag="QF480_08665"
     CDS             721..1371
                     /locus_tag="QF480_08665"
                     /inference="COORDINATES: protein motif:HMM:NF023273.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3365 domain-containing protein"
                     /protein_id="HJN06674.1"
                     /translation="MKYSIIVAYLCIITLIVSCTSNTKTNSEEKKSDDDVRVSYIFQN
                     DKQAKSLKKRGATVTTISKVALGKALKKVMKKGGLEYALDFCKHEAIKITDSLSNAEG
                     VDIKRVAQKNRNPNNKANAIESKIFKQYIMEWLTNKTLQPKLAINENGHPVYYKPIIL
                     TKNCLVCHGKPGEDIPEDISAKISELYPDDKAINFEDGHPRGMWAITFMEVTANTN"
     gene            1592..2056
                     /locus_tag="QF480_08670"
     CDS             1592..2056
                     /locus_tag="QF480_08670"
                     /inference="COORDINATES: protein motif:HMM:NF012264.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HJN06675.1"
                     /translation="MKKIYYIISSMLFILAICISFGFSSINLFVSNNSTVYNQPGDDP
                     AAELYPKGAKIYAEKCVACHMVTGLGIPGAFPPLKGSDYLFADKKRAVEQVLNGSQEE
                     MKVNGANYILPMPFQVDTHKDAVAVINYVLNAWGNKGGSIKVEEVSDIKIVR"
     gene            2258..3040
                     /locus_tag="QF480_08675"
     CDS             2258..3040
                     /locus_tag="QF480_08675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HJN06676.1"
                     /translation="MRSFNFLLTVFFLLFLSIMTPNSSFGQDELGVYEHLDDYISNDL
                     VFTDELYNEINLKESINKPTIIALVYYECPGICSPLLNGLADAMDKTDIQLGEDYQVY
                     TISFSHTEKPPLAKKKKDSYEKLVRHGDPKNSWKFFTGDSVTISRLFDQVGFKVKKEG
                     KEYIHPGTLIVLSPKGKITRYLYGTTYFLPFDIKMAIVEAADEKSGPTINKMLKYCFS
                     YDPDGQKYVLNFTKILGSLILLIVIGLLVTLVIKGRTKIKTQ"
     gene            3043..4659
                     /gene="ctaD"
                     /locus_tag="QF480_08680"
     CDS             3043..4659
                     /gene="ctaD"
                     /locus_tag="QF480_08680"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013446430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit I"
                     /protein_id="HJN06677.1"
                     /translation="MTETSLQQPNFFEEKRGLFSWIFTLDHKRIGLLYLYSVGSFFLV
                     GALLGVLMRLELLNPGADLITAQTYNQVFTLHGVIMVFLFIIPSIPAVFGNFFLPIMI
                     GTDDVAFPRLNLFSWWLYVIGALFALSTLVFGDGPADTGWTFYAPYSVKTGTNVTMSV
                     LAAFVLGFSSILTGLNFIVTIHRLRTPGMGFNQMPLFAWALYATSWIQLLATPIIGIT
                     LLMIAAERMLGVGLFDPSIGGDPILYQHMFWIYSHPAVYIMALPAMGIISEIIPTFAQ
                     RTIFGYKAIAYSSVAIAFVGYFVWGHHMFTSGMSGPAAYIFSILTFMVAIPTSIKVFN
                     WLATLYKGSIDIQVPLLFALGFIFNFLIGGLTGLVIGALAADVHLHDTYFVVGHFHYV
                     MLGGTGFAFFGALHYWFPKIWGRMYNKLVANIAFIIIFIGFNITYFPMLMLGIKGMPR
                     RYYDYLPEFHTLNIISTIGSWILVIGLGLMIYNLVRGYLKGAIETSRNPWNGITLEWQ
                     TKSPPPLHNFDKAPELVEGGPYNYPNAKQG"
     gene            4714..5337
                     /locus_tag="QF480_08685"
     CDS             4714..5337
                     /locus_tag="QF480_08685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013446431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit 3 family protein"
                     /protein_id="HJN06678.1"
                     /translation="MSQSFVLPNSGHNYDAKASKMGMWLFLYTELLLFGGLFMVYMVY
                     RSLHPEAFLIASLNLNVWMGTINTIVLLTSSMTIAMSITAIQLGNIKLSLKLLFLTVL
                     AALAFLVIKYFEWGAKIDHGFWPGMDHFSSLSYGEQLYFYLYFFMTGLHGLHVIVGMV
                     FIIVVMNKIKNKKITKNKNQLLENSGLYWHLVDLIWIYLFPLFYLIH"
     gene            5342..5656
                     /locus_tag="QF480_08690"
     CDS             5342..5656
                     /locus_tag="QF480_08690"
                     /inference="COORDINATES: protein motif:HMM:TIGR02229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C oxidase subunit IV family protein"
                     /protein_id="HJN06679.1"
                     /translation="MNTNTSNSNSAHTSHITSYSEHFGTWVSLILLTSMTVFISVFGA
                     DLSTLTVATALFIASVKSLVVAYYFMHLKYDPKIYRIMMIIVFGMFIIFLIMLIFDYL
                     TR"
     gene            5667..>5962
                     /locus_tag="QF480_08695"
     CDS             5667..>5962
                     /locus_tag="QF480_08695"
                     /inference="COORDINATES: protein motif:HMM:NF014809.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit II transmembrane
                     domain-containing protein"
                     /protein_id="HJN06680.1"
                     /translation="MNASNFVEGVDFSMYLILSISVFFLVGITVVMVYFLFRYSKKRN
                     PVATNIAHNTFLEIIWTVIPTVLVLIMFWYGWTGYKPMLTAPDDAMEIEAIGQM"
BASE COUNT         1937 a          942 c         1034 g         2049 t
ORIGIN      
        1 aaccaaattg aatggtttaa agcaggtagc gctcttaatt tgattaaaag ccaaaattca
       61 tagcgcttct cagaaaataa tatgagtaat ctgaataatg ttacagaatt ttgaattctg
      121 gatgattcca attgacatcc gatatttaag gttcaatatt caacattcaa tataactatc
      181 atgaacatat ctccaaatag catagctgca ttatcctata cactaaccaa caatactacg
      241 gatgaagaat tagaaaaaac tcctgaagat aaaatgatga aattcaaatt cggtattggt
      301 gagttacttc caggtttcga aaagaatttg atgggattaa agaagggcaa taagttcgat
      361 tttattattg tttcaaatga tgcatatgga ccagttgatc catatgctgt atttgatatt
      421 ccaatggata cttttgaagt tgacggaaaa attaacgaac aaatgttaac cataggaaac
      481 aaaataccta tgactgataa tgatgggaat aaacatgttg gcttaattac acttgtcatg
      541 gaaagtgctg taacgatgga ttttaatcac ccattagcgg gtgttgattt acgctttgtg
      601 ggtgaagttc tggaagttct tgaataagac aacctatcgc attttttaat atgacatcat
      661 atgttttgtt tatttttaca aaaaatattt aacattaaaa ttcgtaacaa aatattaatt
      721 atgaaatatt ctataatagt tgcttattta tgcataataa cattaatcgt aagttgtact
      781 tctaacacga aaactaacag tgaggaaaaa aaatcagatg atgatgtcag agtttcctac
      841 atttttcaaa acgataagca ggcgaaaagt ctaaaaaaga gaggtgcaac agttaccaca
      901 atatcaaaag tagctctagg taaagcatta aaaaaagtta tgaaaaaagg cggattggaa
      961 tatgctttgg acttttgtaa gcatgaggca attaaaatta ctgactcgtt atcaaatgcc
     1021 gaaggtgtag atatcaagag ggtagcacaa aaaaacagaa atcctaataa caaagctaat
     1081 gccatcgagt ctaaaatttt taagcaatac ataatggaat ggcttactaa caaaacttta
     1141 caaccaaaat tagctattaa cgaaaacggg catcctgttt actataaacc aataatatta
     1201 acaaaaaact gcttagtgtg tcatggaaaa cctggagagg atatcccgga agatatatcc
     1261 gccaaaattt ccgaacttta tcctgatgac aaggcgatta attttgagga tggtcaccca
     1321 agaggtatgt gggccataac ttttatggaa gttacagcta atacaaacta agctaatgca
     1381 agtttttagg ctacgtgaat ctaagaacta gacactttta tatcttaatc taagcatatt
     1441 gtacaatagc tacaatatca agattcaaac tcctaataag ttgacacttt acagttatat
     1501 ttaagataga ttattttgat ttttttatat agaattgttc taaataacat ttctttatta
     1561 gttttgcaaa acaatattta atctataaat catgaaaaaa atctactata ttatttcaag
     1621 catgctattt attttagcca tatgtatttc atttggtttt tcttccatca atttatttgt
     1681 atctaataat tctactgtat acaatcaacc tggggatgat cctgcagcgg aactatatcc
     1741 taaaggtgct aaaatttatg cagaaaaatg tgttgcctgt catatggtca ccggacttgg
     1801 tattccaggt gcatttccgc cactaaaagg ctccgactat ttatttgccg ataaaaagcg
     1861 agcagtagaa caggtactta atggttctca ggaagaaatg aaagttaatg gcgctaatta
     1921 tatattacct atgccttttc aggttgacac tcataaagat gcagttgccg taatcaatta
     1981 cgtattaaat gcgtggggaa ataagggagg ttcaataaaa gttgaagaag ttagtgatat
     2041 taagatagta cgataatatt aatcaaactt atttagcagc tcctattaca ttaattatca
     2101 ggctgtttat atatttgttt atattttgaa tatctaaagg ttatcaaata ttgataatta
     2161 tatccaaaat atgttatata tcatatttat tcttgtttat ttatttagat ttattctaaa
     2221 ttagcagttt taaaaacaaa aagatatcta tttgaaaatg agatcattta atttcttact
     2281 gaccgtcttt ttcctgttgt ttctttctat catgactcct aattcttcat ttggacaaga
     2341 tgagttaggc gtttatgagc atttagatga ttatataagt aatgatttag tctttacaga
     2401 tgagttgtat aatgagatta atctgaaaga atcaattaac aaaccaacaa tcattgcgtt
     2461 ggtttactat gaatgtcctg gtatttgcag tcccctactt aatggtttag cagatgcaat
     2521 ggacaaaaca gatatccagc ttggtgaaga ttatcaagta tatacaatta gcttttcaca
     2581 tactgagaaa ccccctctgg caaagaagaa aaaggattct tacgaaaagc ttgttagaca
     2641 tggtgaccct aaaaattcat ggaaattctt cacaggtgat agcgtcacta ttagcagatt
     2701 atttgatcag gttggtttta aagttaaaaa agaaggaaag gagtatattc atccaggtac
     2761 tttaattgta cttagcccaa aaggtaaaat cacaagatat ttatatggta ctacatattt
     2821 tttaccattt gatataaaaa tggcaattgt cgaagccgcc gatgaaaaat cagggcctac
     2881 aattaataaa atgttaaagt attgctttag ctacgatcct gatggccaaa aatatgtact
     2941 caacttcact aaaattttag ggtctcttat cctcttaatt gttataggat tattagtgac
     3001 attagttatc aaggggagaa caaaaattaa aacacaataa ttatgacaga gacttcatta
     3061 caacaaccta atttttttga agaaaaaaga ggattgtttt catggatatt caccttggat
     3121 cataaaagga ttggcttgct atatttatat tcagttgggt cattcttttt agttggagcg
     3181 cttcttggag ttttaatgcg tctggaatta ctgaatccgg gagctgattt aatcacagct
     3241 caaacatata atcaggtatt tacacttcac ggtgtaatta tggtttttct ttttataatt
     3301 cctagtattc ctgcagtgtt tggcaacttt tttctaccaa taatgattgg tactgatgat
     3361 gttgcattcc caaggttaaa cttattttct tggtggctgt atgttatcgg tgcattattt
     3421 gctctttcta ctttagtatt tggtgatggt cctgctgata ctggctggac attctatgct
     3481 ccctatagtg taaaaacagg cactaacgtt acaatgtcgg ttctggcagc atttgtatta
     3541 ggattttctt caatattaac cggtttaaac tttattgtaa caattcatag attaagaacg
     3601 ccaggtatgg gattcaatca aatgccactt tttgcatggg cgctatatgc aacttcttgg
     3661 atacaactgc ttgctacacc aattattgga attacactgt taatgattgc agctgaaaga
     3721 atgctgggag tcggtctttt tgatccttcc ataggtggcg atccaatatt gtaccagcat
     3781 atgttttgga tatactctca ccctgctgtt tatattatgg cacttcctgc tatgggtatt
     3841 atatctgaaa ttatcccaac ctttgctcaa agaactattt tcggctataa agcaattgcc
     3901 tactcaagtg tagccattgc atttgttggc tattttgttt ggggacatca tatgtttact
     3961 tccggtatga gcggaccggc agcctatata ttctctatac ttacttttat ggttgctata
     4021 cctacttcca taaaggtatt taactggctc gcaacattat acaaaggctc aatagatata
     4081 caagtacccc tgctgtttgc tctgggtttc atttttaatt ttctaattgg aggtttaacc
     4141 ggattagtaa ttggagctct tgctgctgat gtacaccttc atgacacata ttttgttgtt
     4201 gggcattttc attatgtaat gttgggagga acaggatttg ctttcttcgg ggccctacat
     4261 tattggtttc caaaaatatg gggtagaatg tataacaagc tggttgccaa tatcgcattt
     4321 attatcatct ttattggttt taatattact tacttcccta tgcttatgtt gggaattaag
     4381 ggtatgccca gaagatatta cgattacctg ccggaattcc acacattaaa tatcatatca
     4441 acaattgggt catggatatt agtaataggt ttaggcctaa tgatatataa tcttgtcaga
     4501 gggtatttaa aaggtgctat tgaaacctca cgtaatccat ggaatggaat aacacttgag
     4561 tggcaaacta aatcacctcc cccacttcac aatttcgaca aagcaccaga gctcgttgaa
     4621 ggtggacctt ataattatcc aaatgctaaa caaggttaga atgactttaa tgagagccta
     4681 ttggaatttt aataatttat aatctaacac aatatgagcc aatcatttgt attaccaaat
     4741 tcagggcata attacgatgc caaagcttct aagatgggaa tgtggctttt cctttacact
     4801 gaattattac tattcggagg attgttcatg gtttatatgg tgtaccgatc attacatcct
     4861 gaagcatttc taatcgcctc cttaaacctt aatgtttgga tggggactat taatacaatt
     4921 gtattactaa caagtagcat gaccatagcc atgtctataa ctgccataca actaggcaat
     4981 attaagttat ctctcaaatt gctcttctta acagtactgg cagctctagc atttttagta
     5041 ataaaatatt tcgagtgggg tgcaaagatt gatcatggtt tttggccggg aatggaccat
     5101 ttttcttcat tatcatatgg tgaacaacta tatttctatt tgtatttctt catgactggt
     5161 ttgcatggtt tacatgtaat tgttggaatg gtatttatta tagttgttat gaataagata
     5221 aaaaataaga agatcactaa aaacaaaaat caactacttg aaaattctgg tttatactgg
     5281 cacctggttg atttaatatg gatttacctt ttcccattat tctacctaat acattgatct
     5341 tatgaataca aatacatcta atagtaatag tgctcacaca agtcatataa ccagctattc
     5401 tgagcatttt ggaacatggg ttagccttat actactaact tcaatgactg tttttatttc
     5461 agtatttgga gctgatttaa gtacacttac tgttgcaacc gcattattta ttgccagtgt
     5521 aaaatcgctg gttgtggcat actattttat gcacttaaag tacgatccaa aaatttacag
     5581 gataatgatg atcattgtct ttggcatgtt cattattttt ctcataatgc tgatatttga
     5641 ttacttaaca cgttaaaaca ttgttcatga acgcatcaaa ttttgtagaa ggagttgatt
     5701 tttcaatgta tctcatcctg agcatttctg ttttctttct cgtcgggatt acagttgtaa
     5761 tggtatattt tctgttcaga tacagcaaaa aaaggaatcc ggttgcaact aacattgctc
     5821 ataatacttt tcttgagatt atttggactg ttatacccac agttttagta ctcataatgt
     5881 tttggtatgg atggacaggt tacaagccaa tgttaaccgc tcctgatgat gctatggaaa
     5941 tagaggcaat tggacaaatg tg
//
LOCUS       DASCQP010000509         1900 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001846396, whole genome shotgun sequence.
ACCESSION   DASCQP010000509 DASCQP010000000
VERSION     DASCQP010000509.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1900)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1900)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1900
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001846396"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1803
                     /locus_tag="QF480_08700"
     CDS             <1..1803
                     /locus_tag="QF480_08700"
                     /inference="COORDINATES: protein motif:HMM:NF021126.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhO family protein"
                     /protein_id="HJN06681.1"
                     /translation="ISTYTTNLWATYDYGKDTMRGTPELTKNAANKSSGLDRDYITAW
                     SYGVGETWSFMMPNVKGGASGLLGNVDAIKEADPAYRNAIAQQSNAYWGDQPGTSGPV
                     YVGVIVMFLFILGLFIVNNRLKWVLLIVTVLSILLAWGRNWMPFTDFFIDYIPGYNKF
                     RAVSMILVIAELAIPILAFLALGKLVSDPAILKTKKNSLYYSFGFTGGIVLLFYIAPS
                     VFFDFLNTSEKAQFAELMKGNNAAQVNIYLTSLENVRIAIFKAEAMRSLIFVTLAALL
                     VFLYSLNKIKRSWLIAGLGVLIIIDMVSVNRRYLNNDNFIRAKQFDVPFTASAADNYI
                     LNDHNPDFRVLDLSSSTFNDASCSYFHKSIGGYHGAKLQRYQDIIEGYIQGEIQSIAS
                     VLTKGVTLQMIDSMFTKQQVLNMLNTKYVIVNPEAMPLLNKSAFGNAWFVNNVVMVNS
                     ADEEINALGKNNLQNAAIVDTRFASQIEGKNFIKDSTSSIVLNSYAPNNLMYSYKSPT
                     EQLVVFSEIYYSKGWHAYVDGYHVPYLRANYVLRALTVPAGEHEIEFKFEPRIWVVGE
                     RISFAGSLLLILLLITGIGFEIKNLITKRENNNV"
BASE COUNT          599 a          305 c          383 g          613 t
ORIGIN      
        1 atttccacat atacgacaaa tttatgggca acatatgact atggaaaaga cacaatgcgt
       61 ggcacaccag aattaaccaa aaatgcagct aacaaatcta gtggcctcga tagagattac
      121 attacagcat ggagctatgg agttggcgaa acatggtcgt ttatgatgcc aaacgtgaaa
      181 ggcggcgcat caggattact cggaaatgta gatgctatta aagaagctga ccctgcatac
      241 agaaatgcca ttgcacagca aagtaatgct tattggggcg atcaaccagg gacctcaggt
      301 ccggtttatg taggcgttat tgttatgttt ttatttattc tgggtttatt cattgttaat
      361 aataggttaa aatgggtgtt acttatagtt actgttctgt caatccttct tgcctgggga
      421 aggaactgga tgccttttac tgatttcttt attgattata tcccaggcta taataaattc
      481 agggcagtct ctatgatact ggtaattgct gaactagcaa ttccaatact tgcattctta
      541 gcattgggaa agttggtgtc agatcctgct attcttaaaa caaaaaagaa ctcattgtat
      601 tattcatttg ggttcacagg tggaatagtt ctactatttt atatcgctcc ttctgtattt
      661 tttgattttt taaatactag cgaaaaagca caatttgctg aactaatgaa aggtaataac
      721 gctgcgcagg taaatattta cctcacaagt ctcgaaaatg taaggatcgc tattttcaaa
      781 gctgaggcaa tgcgtagtct aatttttgtc acacttgctg ctttacttgt gtttctttac
      841 tccttaaata aaattaaaag aagctggttg atagcaggat taggcgtatt gattataatc
      901 gatatggttt ctgtaaaccg cagatattta aacaacgata attttatcag agcaaaacaa
      961 tttgatgttc cgtttactgc gagtgctgct gataattaca tacttaacga tcacaatcca
     1021 gattttagag tacttgattt atctagtagt acttttaatg atgctagttg ctcctatttt
     1081 cacaagagta ttggtggtta tcatggagct aaattgcagc gatatcagga tataatagaa
     1141 ggatatatac agggagagat tcagtcgatt gccagtgtgc ttactaaagg agttacttta
     1201 caaatgattg atagcatgtt cacaaagcaa caagtactta atatgctcaa cacaaaatat
     1261 gttattgtta atcctgaagc gatgccttta ttaaataaat cagcatttgg caatgcatgg
     1321 tttgtgaata atgtagttat ggtaaacagc gcggatgagg aaattaatgc gttgggcaag
     1381 aacaatttac agaatgctgc tattgttgat actagatttg cctctcaaat tgaaggaaag
     1441 aactttatta aggattcaac ttcttccatt gttcttaatt cctacgcgcc aaacaacctc
     1501 atgtacagct ataagtctcc tacagagcag cttgttgtgt tttctgaaat atattacagt
     1561 aaaggctggc atgcctatgt tgatggatac catgttccgt atttaagggc taattatgtt
     1621 ctcagagcgt taacagtacc agcgggagaa catgaaattg aatttaaatt cgaaccacgt
     1681 atttgggttg ttggtgaacg catatcgttt gccggatcat tgttattgat attattatta
     1741 ataacaggga tagggtttga aataaaaaac ttaataacaa aaagggaaaa caataacgta
     1801 taacctactc tgattgaaaa aagtacttat cataacctac tactggccac ctagtggagg
     1861 tggtggtgtg cagcgatggg ttaaatttgt taagtattta
//
LOCUS       DASCQP010000510         2144 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001848904, whole genome shotgun sequence.
ACCESSION   DASCQP010000510 DASCQP010000000
VERSION     DASCQP010000510.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2144)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2144)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2144
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001848904"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1926
                     /gene="ligA"
                     /locus_tag="QF480_08705"
     CDS             <1..1926
                     /gene="ligA"
                     /locus_tag="QF480_08705"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF005932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003911 - DNA ligase (NAD+) activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HJN06682.1"
                     /translation="LKELEQLEKDFPDLIRSDSPTLRVGGEPTKNFATVTHKYPMLSL
                     SNTYSESEIQDFDARVRKVTGDKVKYVCELKFDGLSIGLIYKNGVLKQAVTRGDGIQG
                     DDVTNNVRTIKSIPLKLQNHYPNDFEIRGEIFMNISGFKKMNMGREEVGEPPFANPRN
                     AASGSIKMQDPTEVALRPLDCFLYYIPGNQLDITTHYESLQLASEMGFKISKNIAVYK
                     NINEIFEFINDWAEGRKHLNYEIDGIVIKVNSIAQQKQLGTTAKNPRWAISYKFKAER
                     AETVLVSIDYQVGRTGAITPVANLFPVQLAGTIVKRASLHNAYIMATLDVRIGDHVYI
                     EKGGEIIPKIVAVNTEKRLSSASPIRFIINCPECGTPLTKKEDEAAHYCPNEDHCPPQ
                     IKGKLEHFISRKAMNIDSLGEGKIEMLYDNNLVLNVADFYSLNPDVLIGLEKIIPGKE
                     GKKESKISFQEKTVDNIISGIKESKQVPFDRVLFGMGIRFVGATVAKKLTGHFRNITN
                     LKNASFEELTEVDEIGVRIAESIINWFEKPEHNIIVEKLADAGLQLEMNDTLGEVSHV
                     LGGKSFVVSGVFENHSRDEIKALVEQWGGKNTSSISLKTGYLIAGSNMGPAKKLKAEK
                     LGVAIISEEDFLEMLKE"
BASE COUNT          765 a          334 c          434 g          611 t
ORIGIN      
        1 ctgaaagaat tagagcaact ggaaaaagat tttccagatt tgattcgttc cgactcccct
       61 actttaagag ttggtggtga acctaccaag aactttgcta cagttacgca taagtatcca
      121 atgctatctt tatctaacac atattctgag tcagagattc aggattttga cgccagagtc
      181 aggaaagtaa caggtgataa agttaagtac gtttgtgaac ttaaatttga tgggctatcc
      241 atagggttaa tttacaagaa tggcgtacta aagcaggcag taacacgcgg tgatggtatt
      301 cagggagacg acgttacaaa taatgtgaga acaattaaga gtattccact taaactccaa
      361 aatcactacc ctaacgattt tgaaataagg ggtgagatat tcatgaatat tagcggattc
      421 aaaaagatga atatggggcg agaagaggtt ggagaaccgc cttttgcaaa tcctcgtaac
      481 gcagcatcag gatctattaa aatgcaggat ccaaccgaag tagctctcag gcctttggat
      541 tgcttcttat attatattcc aggaaatcaa ctggatatca ctactcatta tgaaagttta
      601 cagttagcct ctgagatggg gtttaaaatt tcaaaaaata ttgctgttta caaaaatatt
      661 aatgaaatat tcgaatttat aaacgattgg gcagagggcc gtaaacacct caactatgaa
      721 attgatggta ttgttataaa agtaaacagc attgcccaac aaaaacaatt aggtactact
      781 gcaaaaaatc caagatgggc aatatcttat aagttcaagg ctgagagggc tgagacagta
      841 ttagtttcaa tcgattatca ggtaggtcgg acaggagcaa ttactcctgt agcaaactta
      901 tttcctgttc aacttgcagg tacaattgtt aaaagagcaa gtttgcataa tgcctacata
      961 atggcaacat tagatgttag aataggtgat catgtttata ttgaaaaagg tggtgaaatc
     1021 atcccaaaaa ttgttgccgt aaacacagaa aaacggttat cttctgccag tccaatcagg
     1081 tttataatca attgtcctga gtgtggtact cctcttacaa aaaaggagga tgaagctgca
     1141 cattattgcc ccaatgagga tcactgtcct ccacaaatta aaggtaaact cgaacatttt
     1201 atttcccgca aggctatgaa tatagacagc cttggagagg gtaaaatcga aatgctatac
     1261 gataacaatc tggttttaaa tgtagccgac ttctatagtc tgaatcctga tgtactaata
     1321 ggactagaaa agatcattcc tggtaaagag ggcaaaaaag aaagcaagat aagtttccag
     1381 gaaaaaacgg tagacaatat tatatcagga atcaaagaat caaaacaagt accttttgac
     1441 agagttttgt ttggaatggg gattaggttt gttggggcca cagtagccaa aaaattaaca
     1501 ggtcatttcc gaaatattac aaatctcaaa aatgcttctt tcgaagagct tacagaagtt
     1561 gatgaaatag gagttcgtat tgcggaatca attattaact ggtttgaaaa acctgagcat
     1621 aacataattg tagaaaaatt agcagacgca ggacttcaac ttgaaatgaa tgatactttg
     1681 ggtgaagtat cacatgtact tggaggaaag tcatttgttg ttagcggagt atttgaaaac
     1741 cattcaagag atgaaataaa ggctcttgtt gaacaatggg gtggtaaaaa cacaagctca
     1801 atatcattaa aaacagggta tttgattgct ggaagtaata tgggtccggc taaaaagctg
     1861 aaagctgaaa aacttggtgt agcaattatc tctgaagaag attttttaga aatgcttaag
     1921 gaatagatca aaacttaaca gcttaggtta ttgccaataa tctacttttg attagcaaaa
     1981 tagatataga cttctaaaat gaataagaaa ctccaccagt aatcataaga acgcctatat
     2041 gagctttttc atttatagtt ttactgttgc gtttgtactt aaaatgaatt gttgaaccaa
     2101 tataagaggc agtgagatgt gcattaaaat tatcatttat tata
//
LOCUS       DASCQP010000511         2573 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001848939, whole genome shotgun sequence.
ACCESSION   DASCQP010000511 DASCQP010000000
VERSION     DASCQP010000511.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2573)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2573)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2573
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001848939"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            293..508
                     /locus_tag="QF480_08710"
     CDS             293..508
                     /locus_tag="QF480_08710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06683.1"
                     /translation="MKKEDDDLFHLALSTLMSFKSRHISKKLSDISHQLKNTTDEAEI
                     YLLQQEYFELKKLTNLIDGELNRPFNY"
     gene            696..2135
                     /gene="asnS"
                     /locus_tag="QF480_08715"
     CDS             696..2135
                     /gene="asnS"
                     /locus_tag="QF480_08715"
                     /EC_number="6.1.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008862739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004816 - asparagine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006421 - asparaginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine--tRNA ligase"
                     /protein_id="HJN06684.1"
                     /translation="MRRTEIKSLLESRDYGKEVVVKGWVRTKRGSKNVAFIALNDGST
                     INNIQIVVDVDDNSAMILEQVSTGAALSVIGELVESTGSGQNVEVHAKEIEVLGTADP
                     DEYPLQPKKHSLEFLREKAHLRYRTNTFAAIARIRHTMTFAIHKFFNDRGFYNIHSPI
                     ITGSDAEGAGEMFQVTTLNLQDVPKTEDGEVDFKQDFFGKVANLTVSGQLEAELAALA
                     LSKVYTFGPTFRAENSNTARHLAEFWMIEPEFAFADIIDNMNLAEDMLKYVISYALEN
                     CMEDLTFLSKRLTDEEKNKKAEERSMELIEKLRFVIDKPFERLTYTEAIEILINSKPN
                     KKKKFQFVIEKWGADLQSEHERYLVEKHFKKPVILTDYPSSIKAFYMKQNDDGKTVRA
                     MDILFPQIGEIVGGSQREEEYDKLSKRIKEFEIPEELMWWYLETRKFGTVPHAGFGLG
                     FERLMLFITGMGNIRDVIPFPRTPMNLEF"
     gene            complement(2149..>2573)
                     /locus_tag="QF480_08720"
     CDS             complement(2149..>2573)
                     /locus_tag="QF480_08720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06685.1"
                     /translation="FYFPGIVKHHSLKFYSGYQHRKTGNYSYSNFIRSPRGYTGISLK
                     EMFSLKADYTFPIIYPDLDIQAVAYLKRVYAQLYYDHATGKNSNNQKQLYNSAGVEIY
                     TDWHFLSLIPNFRLGLRSTYRFKDNQNVFEFLYGFSIN"
BASE COUNT          906 a          427 c          466 g          774 t
ORIGIN      
        1 aaatcggaaa ttgaaatatt ttgaacctca tcactaacta cactttcctc tacttgaaca
       61 tcaccaaaaa gcaacaataa tcttatcaaa tcactttcca gataacttaa gtcttgaaaa
      121 ccaacaatat cagaaaatca ttgatgaaat aaaaaatgcc agaaaagatg agataactct
      181 aagttccaca cactttacaa accatcaaga tccacagatt tcattagttg caatcgaact
      241 tatttccact ccttatgaat taagcgataa ttgggaaaag aacaaaattt ttgtgaaaaa
      301 agaagacgat gatttgtttc atctggcact atccacatta atgtctttta aatcaagaca
      361 tatcagcaaa aaactcagtg atatttcaca tcaattaaaa aatacaaccg atgaagctga
      421 aatatatctc ctgcaacagg aatactttga gttaaaaaaa ctcacaaacc tgattgacgg
      481 tgaattaaac aggccattta attattgaaa taccacacac cttttttgtc attctgagcg
      541 tagcaaagaa tctcaaaaca ttgattatcc gaacataata ggttattcga ttttccatgg
      601 agaacagaga tcattacaat tcaatgaaat tcataataat aataagctca tatatccctg
      661 aaatttagtt cttttgcaat ttaaaattat tagaagtgag aagaactgag atcaaatcat
      721 tactcgaatc aagagattac ggtaaagaag tagttgttaa aggctgggta cgtactaagc
      781 gcggaagtaa aaatgtagca ttcattgcgt taaacgatgg atcgacaatt aataatattc
      841 aaatagttgt tgatgttgac gataattctg caatgatcct tgaacaagta tccacaggag
      901 cagctttgtc agttattggt gagctggttg aatcaactgg cagtggccaa aacgttgaag
      961 tacacgctaa ggaaattgaa gttctgggaa cagctgatcc ggatgagtat cccctccaac
     1021 caaaaaaaca ctcgcttgaa tttttacggg aaaaggcaca tttacggtat cgtactaata
     1081 cttttgctgc aattgcacgt ataaggcata caatgacatt tgctattcat aagtttttca
     1141 acgatagagg attctacaat atacattcac caataattac cggctcggat gcggaaggtg
     1201 ctggagaaat gtttcaggta acaacattaa atttacaaga tgttccaaaa acagaggatg
     1261 gagaagttga ttttaagcag gacttttttg gaaaagtagc aaacttaaca gtgtcaggac
     1321 aattggaagc tgagcttgca gctcttgctc tgtcaaaggt ttatactttc ggtcctacat
     1381 ttcgagctga aaactcaaat actgcacgac atcttgctga attctggatg atagaacctg
     1441 aatttgcatt tgccgatatt atcgataaca tgaaccttgc tgaagacatg ctaaaatatg
     1501 tcattagtta tgctcttgag aattgcatgg aagaccttac ttttttgagt aaacgtttaa
     1561 ctgatgaaga aaagaataag aaagctgaag aacgttcgat ggaacttata gaaaagctaa
     1621 gatttgttat tgataagcca ttcgaaagat taacttatac agaggcaata gagattctta
     1681 taaattcaaa acctaacaaa aagaaaaagt ttcagtttgt tatcgaaaag tggggtgccg
     1741 atttgcaatc ggaacatgag aggtatctgg tggagaaaca tttcaaaaaa cctgttattc
     1801 ttaccgatta cccaagctct atcaaagcct tttatatgaa acaaaacgat gatggaaaaa
     1861 ccgttagggc tatggatatc ctctttcctc aaattggtga aatcgttgga ggttcgcagc
     1921 gcgaggaaga atatgataaa ttaagtaaac gaattaagga gtttgaaatt ccggaagaac
     1981 tgatgtggtg gtatcttgag accagaaaat ttggtactgt tcctcatgca ggtttcgggt
     2041 tgggatttga acgtcttatg ttatttatta ccggtatggg caatattcgt gatgttatcc
     2101 ctttcccacg aacacctatg aatctggaat tctaatcagg ttcactcgtt aattaatact
     2161 aaaaccgtat aaaaattcaa aaacattttg gttatcctta aaacgataag tacttcgtaa
     2221 tccaagtcgg aaattaggta tgagacttaa gaaatgccag tcagtgtaaa tttcaactcc
     2281 ggcagaattg tacaattgtt tctgattatt actgtttttt ccggtagcat gatcatagta
     2341 tagttgagca tatactcttt ttaagtaagc aactgcctga atatcaagat ctggatatat
     2401 aatgggaaat gtataatcag cttttagact gaacatttct tttaaactga ttcctgtata
     2461 gcctcttggt gatctaataa aattactgta gctataattt ccggtttttc tatgttgata
     2521 gcccgaataa aattttaaac tgtgatgctt tacgatgcct gggaaataaa atg
//
LOCUS       DASCQP010000512         6411 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001853963, whole genome shotgun sequence.
ACCESSION   DASCQP010000512 DASCQP010000000
VERSION     DASCQP010000512.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 6411)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6411)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6411
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001853963"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1883
                     /locus_tag="QF480_08725"
     CDS             <1..1883
                     /locus_tag="QF480_08725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004301872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="SEC-C metal-binding domain-containing protein"
                     /protein_id="HJN06686.1"
                     /translation="KKMLEQKNKMIQDYSIKSERIHTVTQLLKAYTLFEKDVEYVIME
                     NKVKIVDEQTGRVMEGRRYSDGLHQAIEAKENLKIEAATQTYATITLQNYFRMYKKLA
                     GMTGTAETEAGELWDIYKLDVIVIPTNRPIIRDDRQDLVYKTKREKYKAVIDEIEKLV
                     AEKRPVLVGTTSVEISELLSRMLNRKHIHHNVLNAKLHQREAQVVKEAGQPGMVTIAT
                     NMAGRGTDIKLGDGVVRSGGLAIIGTERHDSRRVDRQLRGRAGRQGDPGSSQFFVSLE
                     DDLMRMFGSGRIAGIMDKLGLEEGEVIQHSMITKSIERAQKKVEENNFGVRKRLLEYD
                     DVMNSQREVIYRRRYHALFGERLSVDISNMIYDLCEQISSDYQSTNDFEGFKMEVLRT
                     LAIETPVDEKEFTAIDIDELTHKLVKVVYSSYVEKRNRLATTTLPVIKDVYENQSQYE
                     NIAIPFTDGKRQVQIVANLKKSVESNGAEVPIAFEKGFTLSTIDDLWKEQLREMDELK
                     QSVQNASYEQKDPLLIYKFESFELFKKMIQKINKDVGSFLIKGDVHMQGDASVREAKV
                     PRGLDRSQMKEERGDMLSQAHSDTQERQKPQPIKVEKRVGRNDQCPCGSGKKYKHCHG
                     KN"
     gene            1906..2199
                     /locus_tag="QF480_08730"
     CDS             1906..2199
                     /locus_tag="QF480_08730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06687.1"
                     /translation="MKNLFLYMSIIMLSTLTLLNIDCKTPDPGPGYPTYNYIDPIVNP
                     PDIFQVLYNISFPGDRFAQITFDSNAVWYVQKVGGDSRPMLWAVNDTTQLVRP"
     gene            2526..4760
                     /locus_tag="QF480_08735"
     CDS             2526..4760
                     /locus_tag="QF480_08735"
                     /inference="COORDINATES: protein motif:HMM:NF039873.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HJN06688.1"
                     /translation="MLKKYHVIYLIISTLILHNPFLHSANIENPEKKTRPKVGLVLSG
                     GGAKGFAYIGLLRVFQEVGLRVDYIGGTSIGSIMAGLYAIGYSPDDIEKMIREQNWTA
                     LLKDQIQRKYVAYEEKEFLENSIISLPFKKRKLGLKQAMYSGQQINLLLNKYFSPAWN
                     ISDFNKFQTPFLCVGTNLFNGDAEVLKHGYLPMAIRSSMSILGYFSPTYFNGYYLIDG
                     GIVNNYPAVPLKEEGAQLIIGGEVQSTLKDSISQLTTLAEIINQVVFFHGEDANKEAR
                     KVIDLNIRYKVPAGTMDFEKYDIIIAYGDSVARAHYKELKALADSLNAIEFRPLKEYN
                     TKPVDSVDINKVIYEGQEKMSMIYLDNYFERFENKRISLDELKHVITRVYGTRFYKYV
                     FYELKPIGNGKADLIINLEEGSPGYLSASVHYDTDYGGSIRINGIFRNVLGHRSKLFT
                     ELVMGSNPRFRALYLLSNGAKPGFGTEVDMYDFSFRDYNKNTIIHNLTIRNIKASVFL
                     TSTFNNLYNLKGGFEYEYFSISQEDIKVDSALIPFEDFHSYGNIFIKLRADTRNKAYF
                     ATEGFNAEFKIVYAIPLSTDWAEEVFTNSLILYAKYDQNFSISPKFVLKPSIFVGGTL
                     KQDTPPIQHLFGFGGLNEINYISNFVPFTGVYFIQEFGYYAALARLKLQYNVYKKIYL
                     TLRSDIGATGLYLKDVVDPTNTLFGYGLTTSYNSFIGPVEFTVMGSNINPSVSFFINV
                     GFSF"
     gene            4775..5488
                     /gene="pyrH"
                     /locus_tag="QF480_08740"
     CDS             4775..5488
                     /gene="pyrH"
                     /locus_tag="QF480_08740"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009133821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033862 - UMP kinase activity [Evidence
                     IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HJN06689.1"
                     /translation="MYSRILLKLSGEALMGDQEYGINLSTISRYCEDIKKVVDHNVQV
                     AIVVGGGNIYRGLQGVANGMDRVQGDYMGMLATVINSMALQAELEKMKIKVKLLSGLF
                     IDTISETTSSRKADQYLNDGYVVIIAGGTGNPFFTTDTASALRAVEISADILMKGTRV
                     DGVYTADPEKDPNAIKYKSITFDEAYNNKLQIMDMTAFTLCKENNLPILVFDMNTPDN
                     LFKAVMGKDIGTIVKSDIQ"
     gene            5547..6110
                     /gene="frr"
                     /locus_tag="QF480_08745"
     CDS             5547..6110
                     /gene="frr"
                     /locus_tag="QF480_08745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009137893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008135 - translation factor activity, RNA
                     binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HJN06690.1"
                     /translation="MTDDAILCLEEVEESMQQAIKHLEKEFLKVRAGKASPTMLAGVR
                     VDYYGVSTPLEQTSNINTPDARQIIIQPFDRSTIDEIEKAILNANLGFNPQNEGDIIR
                     INVPPLTEERRLDLVKKAKAIVEDTKIGIRNARRQGNDEAKQLEKDGLPEDDSKKLMG
                     EIQKLTDSYSEKIDSLFEAKEKDILTV"
     gene            complement(6135..>6411)
                     /locus_tag="QF480_08750"
     CDS             complement(6135..>6411)
                     /locus_tag="QF480_08750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06691.1"
                     /translation="SDNIKEAHGALLKQQDILTQKFNDLGQIFTFSNIAHQLIGKAYS
                     SLMTTSNIAAFAYRLVKKVKWFTERKTRKNKKKLKRKDHKQLKSDKD"
BASE COUNT         2218 a          950 c         1264 g         1979 t
ORIGIN      
        1 aaaagaaaat gctggagcag aagaacaaga tgatccagga ttattcaata aaatcagaaa
       61 gaatccatac tgttacccaa cttcttaaag catatacact ttttgaaaag gatgtggaat
      121 atgttataat ggaaaacaaa gttaaaattg ttgacgagca aacaggtcgt gttatggagg
      181 gtcgtcgata ttctgacggt ctacaccagg caattgaggc aaaggagaat ttgaagattg
      241 aggcagcaac ccaaacatac gccacaatta cactccaaaa ttatttccgg atgtataaga
      301 agcttgctgg gatgacaggt acggctgaaa cagaagcagg ggagttatgg gatatttaca
      361 aacttgatgt aattgtaatc cccacgaatc gaccaattat acgagacgac agacaagatt
      421 tggtttataa aacgaaacgc gaaaaatata aagctgtaat tgatgaaatt gaaaaacttg
      481 tagcagaaaa acgacctgtt ttagtaggta ctacttccgt tgaaatatcc gagcttctta
      541 gcaggatgtt aaacagaaag catattcatc acaatgtact aaatgcgaag ctgcatcaac
      601 gtgaagctca ggttgtgaaa gaagctggtc agcctggaat ggttacaatt gctacaaaca
      661 tggctggtcg tggtacagat attaaacttg gcgatggtgt tgtcaggtct ggtggtcttg
      721 caattattgg taccgaaaga cacgactcaa gacgtgttga tcgtcagttg agaggacgtg
      781 caggacgaca gggtgatcct ggtagctcac agttcttcgt atcattggaa gacgacctta
      841 tgagaatgtt cggctcaggt aggatagctg gaattatgga taaacttgga ttggaagaag
      901 gcgaagtaat tcagcattcg atgattacaa aatcaataga gcgtgcacag aaaaaggttg
      961 aggaaaataa ctttggtgtc cgtaagcgtc ttttggaata tgatgatgtc atgaattcac
     1021 aacgcgaagt aatctatcgt cgacgctatc atgcattgtt tggagaaaga ctttctgttg
     1081 atatatcaaa tatgatatat gatttatgcg aacaaatttc aagtgattat cagtcgacaa
     1141 atgactttga aggatttaaa atggaagtgc ttagaacact tgctattgaa acaccagttg
     1201 atgaaaagga atttactgcc attgatattg atgagctaac tcataaatta gttaaagtag
     1261 tttattcatc ttatgttgaa aagagaaaca ggcttgctac cacgacgctt cctgttatca
     1321 aagatgtata tgaaaaccaa agtcaatacg aaaatattgc aatacctttc actgatggaa
     1381 aacgtcaggt tcaaatagtt gcaaatctta agaaatctgt ggagtcaaat ggtgctgaag
     1441 ttccaattgc atttgaaaaa ggctttactc tttcaaccat tgatgatcta tggaaagaac
     1501 aattacgaga aatggatgaa ctgaaacaat cagttcaaaa tgcttcatat gagcaaaaag
     1561 atcccttatt gatttataaa tttgaatctt ttgaattgtt taaaaagatg attcagaaaa
     1621 taaataaaga tgttggttcc ttcctgataa aaggagacgt acatatgcaa ggtgatgctt
     1681 ctgtacgtga agcaaaggta ccccgtggac ttgatcgctc acaaatgaaa gaagaaaggg
     1741 gagatatgct ttcccaagct catagtgata ctcaggaaag gcaaaaacca caacctataa
     1801 aagttgaaaa acgagttgga agaaatgacc aatgtccttg tggtagtggg aaaaagtaca
     1861 aacattgtca cggaaaaaat tagtaactta gcaaaaaata tggttatgaa aaacttgttt
     1921 ttgtacatga gcattattat gctatctact cttaccctct taaatattga ttgtaagaca
     1981 cctgatcctg gaccaggata tcctacttat aattatatcg atccgattgt taatcctccg
     2041 gatattttcc aggtcttgta caatattagt tttccaggtg acagattcgc acaaataact
     2101 tttgatagca atgctgtatg gtatgttcag aaagtggggg gagatagccg accaatgttg
     2161 tgggccgtca acgataccac acaactcgtt aggccttgaa ggcgggatta cctatgtttt
     2221 tgcagcaaac aataataact acgaagaatt atctaacttt tttgtgcagt tcaataaatt
     2281 ggaaatagat tatgatggtt ttgaaccaaa attctaggtt taacaataag atcatagtta
     2341 aagtatattc tatttgcaat acagagattt aattctttag ttatatcata tttacttatt
     2401 tgagttacca aattactttc ccagattaaa ttaattttaa tgatctcggt atccataatt
     2461 tattgtcgtg cagttaagct ttttcacctt atatttgtaa ctgtttaatt ttagattatt
     2521 gacttatgct caaaaagtat catgttatat atttgattat aagcacatta atacttcaca
     2581 accctttttt gcattcagct aatattgaaa accctgagaa aaaaacacgg ccaaaggtag
     2641 gtttagtttt aagcggaggg ggcgctaaag gattcgctta cattggcttg ctacgggttt
     2701 ttcaggaagt aggtctcaga gttgattata taggaggtac tagcatcgga agtataatgg
     2761 ctggcttgta tgctattggt tatagccctg atgatataga aaaaatgatt agagagcaga
     2821 attggactgc tctgctaaaa gaccaaattc aaagaaagta tgtagcttat gaagaaaaag
     2881 aatttcttga aaattcaata atttctttac catttaaaaa aagaaaatta ggcttgaaac
     2941 aagcaatgta ttccgggcaa cagattaatt tattgctaaa caaatatttt tcacctgcct
     3001 ggaatatttc agatttcaat aaatttcaaa cgcctttcct ttgtgtggga acaaatttgt
     3061 ttaatggcga tgctgaggta cttaaacatg gatatcttcc aatggcgatt cgatcaagta
     3121 tgtcaattct aggttacttc tctcctacat attttaatgg atattacctt atcgatggag
     3181 gcattgttaa caattatcct gccgttccat taaaagaaga gggagctcag ctgattattg
     3241 gtggtgaggt gcaatcaaca cttaaagata gtatatcaca actaacaaca ttagcagaaa
     3301 taataaatca agttgttttt tttcatggag aagatgcaaa caaagaagct agaaaagtta
     3361 ttgatttaaa tattcgctat aaagttcctg ctggtaccat ggactttgaa aaatatgata
     3421 taattattgc ttacggcgac agcgttgcaa gagctcatta taaggaactg aaagcacttg
     3481 ccgattcgct gaatgcaatt gaatttagac ctctaaaaga atataatacg aaacctgttg
     3541 attcagtaga tattaacaaa gtaatttatg aaggtcagga aaaaatgtca atgatttatt
     3601 tggataatta ttttgagcga tttgaaaata aaagaatatc acttgatgaa ctgaaacatg
     3661 ttattacaag agtttatgga acaagatttt acaagtatgt attttacgaa cttaagccta
     3721 ttggcaacgg gaaagctgac ctaataataa atcttgaaga ggggtcgcca ggctacttat
     3781 cagcatcagt gcactatgat acagattatg gtggtagcat tcggataaat ggcattttta
     3841 gaaatgtgct tggacatagg agtaaattat ttacagaatt agtaatggga tcgaacccgc
     3901 gttttcgtgc actttacctt ctttctaacg gagctaaacc aggatttggg actgaagttg
     3961 atatgtatga ctttagtttt cgcgactata ataagaatac aataattcat aatttgacaa
     4021 taagaaatat taaggcttct gtttttttaa cttcaacatt taataattta tataacctta
     4081 agggaggttt tgagtacgaa tatttttcaa tttctcagga agatattaaa gttgactcag
     4141 cgttaatacc atttgaagat tttcatagtt acggtaatat atttattaaa ctacgggctg
     4201 acacacgaaa taaagcttac tttgctacag aaggttttaa tgcagagttc aaaattgtat
     4261 atgctatacc tctctcaaca gattgggctg aagaagtatt tactaattct ttaattttgt
     4321 atgcaaaata tgaccaaaat tttagtataa gtccaaagtt tgtattaaaa cctagtattt
     4381 tcgtaggggg aacgcttaaa caagatacac caccaattca gcatttattt ggtttcggtg
     4441 gtttaaatga gataaattat attagtaact tcgttccgtt tactggtgta tattttattc
     4501 aggaatttgg ttattatgct gctttggcca gattgaaatt acagtataat gtttataaaa
     4561 aaatatattt aacgttaaga tctgatattg gagctacagg attatatttg aaagatgttg
     4621 tagatccaac aaatactttg tttggatatg gtttaacaac atcatataat agtttcatag
     4681 gtccagtgga gtttacggta atgggatcaa atattaatcc gtcagtatcg ttttttatta
     4741 atgtaggttt tagtttttaa aaaaagtata aaatatgtat agtaggatat tattaaagct
     4801 aagtggagaa gcacttatgg gtgatcagga atatggcata aatctaagta ctatttcccg
     4861 ctattgtgaa gatatcaaaa aggtggtcga ccataatgtg caagtagcaa ttgtagtagg
     4921 aggtggaaat atttataggg gattacaagg tgttgccaat ggaatggacc gagtacaagg
     4981 cgattatatg gggatgcttg caaccgtaat taactcaatg gcattacaag ctgagcttga
     5041 aaagatgaaa attaaggtta aactattatc gggtcttttt atcgatacaa ttagcgaaac
     5101 aacaagtagt cgaaaagccg accaatatct caatgatggt tatgttgtaa ttattgctgg
     5161 tggtaccgga aacccattct ttacaaccga tactgcttcg gcattacgcg ctgttgaaat
     5221 tagtgcagat atactaatga agggaaccag agtagatggc gtttatacag ctgatcctga
     5281 gaaagatcca aatgctatta aatataagtc aattactttt gatgaagcat acaacaataa
     5341 actacaaata atggacatga ctgcgtttac tttgtgcaaa gagaataacc ttcccatttt
     5401 ggtgtttgat atgaacacgc cagataattt attcaaagca gttatgggca aggatatagg
     5461 cactattgtt aaatcagata ttcagtaatt tatactgttt cattaattag aaatagtaca
     5521 tttgtgggaa tcaaatttct gaaaagatga cagacgatgc aattttgtgt ttagaagagg
     5581 tagaagaaag catgcaacaa gcgatcaagc acctcgaaaa ggaattccta aaagtaagag
     5641 ccggcaaggc tagtcctaca atgttagcag gggttagagt agactactat ggtgtttcaa
     5701 ccccgcttga acaaacatca aacattaaca ctccggatgc aaggcagatt attattcaac
     5761 cttttgacag aagtacaatt gatgaaattg aaaaggcaat tcttaatgct aaccttggtt
     5821 ttaatcctca aaatgaagga gatataataa gaattaatgt cccgccttta acagaagaaa
     5881 gaagacttga tctggtaaaa aaggctaaag ctattgttga agacactaaa attggaattc
     5941 gtaacgcaag acgacaagga aacgatgaag caaagcaact tgagaaagat ggattgccgg
     6001 aggatgactc aaaaaagttg atgggtgaaa ttcagaagct aaccgatagt tattcagaaa
     6061 aaatagatag tttatttgaa gctaaggaaa aagatatcct aacagtttaa ttcatattat
     6121 ttcagaaata tctcctaatc tttatcactt ttcaattgtt tgtggtcttt tcgttttaac
     6181 ttttttttat tttttctggt ttttctttca gtaaaccact ttactttctt aaccagccta
     6241 taagcaaatg ctgcaatgtt agaggtagtc attaaagaac tataagcctt tccaattaac
     6301 tgatgagcaa tatttgaaaa agtaaatatc tgacctaagt cattaaattt ttgggttagt
     6361 atatcctgtt gttttaaaag tgcgccgtgt gcctccttaa tattgtcaga a
//
LOCUS       DASCQP010000513         3116 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001854601, whole genome shotgun sequence.
ACCESSION   DASCQP010000513 DASCQP010000000
VERSION     DASCQP010000513.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3116)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3116)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3116
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001854601"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..476)
                     /locus_tag="QF480_08755"
     CDS             complement(<1..476)
                     /locus_tag="QF480_08755"
                     /inference="COORDINATES: protein motif:HMM:NF015385.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06692.1"
                     /translation="MKLITEMFDDFEVLTEGKNGKDLKIKGVFMQAETKNRNGRLYPL
                     NILTKEVTRYNKELVQNKRAFGELGHPEGPTVNLDRVSHLIEELYPEGKNIIGKAKIL
                     DTPNGKIVKELLNAGAKLGVSSRGMGTLEKKGQTNVVKDDFYLATAGDIVADPSAP"
     gene            complement(478..804)
                     /locus_tag="QF480_08760"
     CDS             complement(478..804)
                     /locus_tag="QF480_08760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06693.1"
                     /translation="MANSIINSQGRSVLHIDSTDGAITLAELKATNEATVVSADIVDI
                     HWQTATSITIDRGGTDVHAFTGTGHWNLGQSGAVLSGTNTADIGITVAGDSYAVIVVH
                     KQYSGG"
     gene            complement(813..1058)
                     /locus_tag="QF480_08765"
     CDS             complement(813..1058)
                     /locus_tag="QF480_08765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06694.1"
                     /translation="MKKFKEFNTWVIEKDEHKKSSTYKKLTPKMKKAVDDVFDTMEKN
                     PGDFLSTFDKNVEKVAKKHGVKVKDIMNYFDKEMLTI"
     gene            complement(1045..1236)
                     /locus_tag="QF480_08770"
     CDS             complement(1045..1236)
                     /locus_tag="QF480_08770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06695.1"
                     /translation="MSEIPNMISSLVDDNKIDAETHFKNSIAQKIGSALDLKRVEVAN
                     SLIKGQLNTSVGDSADEEI"
     gene            complement(1259..2791)
                     /locus_tag="QF480_08775"
     CDS             complement(1259..2791)
                     /locus_tag="QF480_08775"
                     /inference="COORDINATES: protein motif:HMM:NF018886.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="portal protein"
                     /protein_id="HJN06696.1"
                     /translation="MAQLFGFQITRAKDKGGQASFVLPDPESGATTTAGFYSEFLDIE
                     GQTKSESDLIRRYRSTSEHPECDLAIEDIINESINIDEYRQAVSINTDGLPYSAKIKR
                     RIRDEFSQVLRLLDFTNKSHDVFRRWYIDGRIYFHKIVDEEDPQKGIQELRYIDALKI
                     KRIRKIEKAETKKKSPTLKVLEDYYLYNEQGVTSANTGSSGPVGTAIKITSDAIAMCG
                     SGLFDPTKALVLSYLHKAIKPVNQLRMIEDAVVIYRIARAPERRIFYIDVGNLPKVKA
                     EAYLKDVMNRYRNKLVYNASTGEIKDDRQQMSMLEDFWLPRREGGRGTEITTLPGGQN
                     LGEIDDIVYFQKKLYRSLNIPVSRLESDSGFSLGRGAEITRDEVKFTKFVQKLRNKFN
                     TLFNDILKTQLILKGVIAEEDWQEIQENLKYSYMKDGHYAEMRDMDVLRERLDILNSM
                     EPYIGDWFSKEYVQKHVFRMTQEEIDKMDRQINKEPEPDDHEPINNPMDKDASAPPQI
                     GG"
     gene            complement(2835..>3116)
                     /locus_tag="QF480_08780"
     CDS             complement(2835..>3116)
                     /locus_tag="QF480_08780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06697.1"
                     /translation="NDTDFALRNAFERWMNAINAMSDNSGLENPADYMVDAFVDQLDR
                     AGQVIKSYTFRGMWPLTIGNIDVAYATNDEVETFDVTYRYQFFETNTTT"
BASE COUNT          903 a          637 c          425 g         1151 t
ORIGIN      
        1 tctggtgcag atggatccgc aacgatgtct cctgctgttg caagataaaa atcgtcttta
       61 actacattag tttgaccctt cttttcaagt gtacccattc ctctactaga gactccaagt
      121 tttgcacctg catttagcaa ttctttgaca attttaccat taggcgtgtc aagaatcttt
      181 gctttcccga tgatattttt accttcgggg tatagttctt cgattaaatg agaaacccta
      241 tccaaattga ccgttggccc ctctggatgt cctagttctc caaaagctcg tttattctga
      301 actagttcct tattatatcg agtaacttct tttgttaaaa tattaagagg atataatcta
      361 ccattccgat ttttagtctc ggcctgcata aaaacccctt taattttcaa atctttgcca
      421 ttcttacctt cagtaagaac ttcaaaatca tcaaacattt ctgtgattag cttcatatta
      481 tcctcctgaa tattgtttgt gtacaacaat aacagcataa gaatcgcctg ctactgtaat
      541 accaatatct gctgtatttg ttcctgacag aactgctcca gattgaccta aattccaatg
      601 tcctgttcct gtaaaggcat gaacatctgt accacctcta tctattgtaa ttgaggttgc
      661 ggtttgccaa tgaatatcaa caatatcagc tgacactaca gtagcttcat tagttgcttt
      721 aagttctgct agtgttattg ctccatcagt agaatctata tgtaaaacac ttctaccctg
      781 tgagtttata attgaatttg ccatagttta tcctaaattg taagcatttc tttatcaaaa
      841 taattcataa tatctttaac ttttacacca tgtttttttg caactttttc tacattttta
      901 tcaaatgtac ttaaaaaatc gcctggattc ttttccattg tgtcaaagac atcatcaaca
      961 gcctttttca ttttaggtgt aagtttctta tatgtagatg atttcttatg ttcatctttt
     1021 tctataaccc atgtattaaa ttctttaaat ttcttcatcg gcagaatccc ctactgaggt
     1081 attaagttgt ccttttatta aagaattcgc tacttctact cgttttaagt ccaatgcact
     1141 tcctattttt tgtgctattg aatttttaaa atgagtttca gcatctattt tgttatcatc
     1201 aactagtgat gaaatcatat ttggtatttc gctcataatt tattttttgt gttagtggtt
     1261 atcctccaat ttgcggcggc gctgatgcat ctttatccat tggattattt attggttcat
     1321 gatcatctgg ttctggttct ttattaattt gtctgtccat cttatcaatt tcttcctgag
     1381 tcatacgaaa aacatgtttt tgaacatatt ctttagaaaa ccaatcacct atatacggtt
     1441 ccatactatt tagtatatct aatcgttcac gaagcacatc catatctcgc atttccgcat
     1501 aatggccatc cttcatataa ctatatttaa gattttcttg aatttcttgc caatcttctt
     1561 ctgcaataac acccttgagt attaattgtg ttttaagaat atcattaaac aaagtattaa
     1621 acttatttcg taatttttga acaaacttag taaactttac ttcatctctt gtaatctctg
     1681 caccccggcc taaactaaat cccgaatcag attctaaccg actaacaggt atattcaaag
     1741 accgatataa ttttttctgg aaatagacaa tatcatctat ttctcctaga ttctgtccac
     1801 caggcagggt tgtaatttcg gttcctctac caccttctct acgaggcaac cagaaatcct
     1861 ctaacatact catctgctga cggtcatcct ttatctcacc agtagatgca ttatacacca
     1921 acttgtttcg ataacgattc atcacatctt taagatatgc ctctgctttt actttcggta
     1981 aatttccaac atcaatatag aaaattcttc gttctggtgc tcgtgcaata cgataaatca
     2041 ctactgcatc ttcaatcatc ctaagctgat tgacaggttt aattgcttta tgtaaatacg
     2101 ataaaactaa tgctttcgta ggatcaaaca atcctgaacc acacattgca attgcatctg
     2161 atgtaatttt aatagcagtt ccaactggcc cagaggaacc agtatttgca ctagttaccc
     2221 cttgttcatt atacaaataa taatcttcta atactttaag tgtgggggat tttttctttg
     2281 tttctgcttt ttcgatttta cgaattcgtt taatctttaa agcatcaatg tatcttaatt
     2341 cttgtattcc tttttgtgga tcttcttcat ctacaatttt atgaaaataa atcctaccat
     2401 ctatgtacca tctcctaaaa acatcgtgag atttattagt aaaatctaat aatcttaata
     2461 cttgtgaaaa ttcatcccta attcttcttt taatttttgc agaataaggt aaaccatcag
     2521 tattaataga tactgcctgt ctatattcat caatatttat agactcatta ataatatctt
     2581 caatagctaa atcacactct ggatgctctg aggtagacct atacctacga ataagatcag
     2641 attcggactt agtttgtcct tctatatcga gaaattcgct gtagaatcca gcagttgtgg
     2701 tagccccaga ttcaggatca gggagaacaa acgatgcctg tccccccttg tcctttgctc
     2761 tggtaatttg aaatccaaat agttgtgcca taatactccg taatcaatat caatacaaat
     2821 atttatacga attattaagt tgtagtattg gtttcaaaaa actgatagcg ataggttaca
     2881 tcaaatgttt ctacttcatc atttgtagca tatgctacat caatgtttcc aatggtaagt
     2941 ggccacatac ccctaaaggt atatgattta attacctgtc ctgcacgatc taattgatca
     3001 acaaatgcat ctaccatata atcagctgga ttttccaatc cactattatc tgacatagca
     3061 tttatagcgt tcatccatcg ttcaaatgca ttacgaagcg caaaatcagt atcatt
//
LOCUS       DASCQP010000514         2110 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001858566, whole genome shotgun sequence.
ACCESSION   DASCQP010000514 DASCQP010000000
VERSION     DASCQP010000514.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2110)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2110)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2110
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001858566"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..925
                     /locus_tag="QF480_08785"
     CDS             <1..925
                     /locus_tag="QF480_08785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06698.1"
                     /translation="GQPTPGSIPELFAPNIISNGLINRDITFTPEGDEIYTTFSTSDY
                     SYAAVLSSKKVNGIWSNPEVVSFATSPEYATIEPCISHDGSRLFFATNRPVNDSTKND
                     DTNIWVVKREGSDWGTPQVLDTIINTNLGEFYPSITKSGCLYFTRDEKSGVSSIYKSA
                     YVNGKFTKPERLPDQVNCGRNRFNAYVSPDENYIIIPALGVEKDVTGVNYYITFKQDN
                     GLWSEPINMGQVINKDLGRGWSASLSPDGKYLFFMSSCGFDEKSQPWSLTYNLFQQLQ
                     SEPKNGNADIYWVKSDFIEDLKAKAVLANAK"
     gene            1112..1516
                     /locus_tag="QF480_08790"
     CDS             1112..1516
                     /locus_tag="QF480_08790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06699.1"
                     /translation="MKQLFKPPVLILTLAIIITSCGGSPEKELIGTWKAQKVETDFDE
                     QFTTPEMLRQVVEMQKETYFRIIDDSTLIIISPGNTHETKWSLDPDDQSISYFFDSSP
                     NQLNKLGTFSSDKIVSETNTPIGKITIYYEKE"
     gene            complement(1564..>2110)
                     /locus_tag="QF480_08795"
     CDS             complement(1564..>2110)
                     /locus_tag="QF480_08795"
                     /inference="COORDINATES: protein motif:HMM:NF012993.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /protein_id="HJN06700.1"
                     /translation="SWWILKPIEKFAIDLGGTTGTLGKEDHPVVFNKSNGDTAIITPI
                     ICYESVYGEFVANSIKLGAGLIFVITNDGWWGDTPGYRQHFLFSVLRAIETRRSVARS
                     ANTGISAFINQRGDILQQTQYWKPAVIQQALNANYELTYYTKNGDFIARISAFVSALL
                     ILIAFTQGYLRKKKKGVKSEV"
BASE COUNT          734 a          373 c          361 g          642 t
ORIGIN      
        1 gggacaacca accccgggct caattcctga attgtttgct cccaatataa tttcaaatgg
       61 gctcattaac cgcgacataa catttacacc tgaaggagat gagatatata ctacattttc
      121 tactagtgat tatagctacg ctgcagtgct ttcatcgaaa aaggttaatg gaatatggag
      181 caatccggaa gtagtttcat ttgctaccag tcctgaatat gcaacaattg aaccatgtat
      241 aagccatgat ggaagtcggt tattttttgc aaccaaccga cctgtaaacg actcaacaaa
      301 aaatgatgac accaatatat gggttgtgaa aagagaaggt agcgattggg gaacaccaca
      361 agtattagac acaataatta atacaaatct gggtgagttt tacccttcga ttacaaaaag
      421 tggatgcttg tattttacac gagacgaaaa atctggtgtt agttcaattt acaagtctgc
      481 atatgtaaat ggaaagttta ctaaaccaga aagactacct gatcaagtta attgtggacg
      541 aaaccggttt aatgcttatg tttcgccaga tgaaaactat ataataattc ccgccttagg
      601 tgttgaaaaa gatgtaacgg gtgttaacta ttatataaca tttaagcaag acaatggact
      661 atggagcgaa cctataaata tgggacaagt aataaacaag gatttaggca gaggttggtc
      721 ggcctcactt tctcctgatg gtaaatattt gttttttatg tcttcttgcg ggttcgatga
      781 aaaatctcaa ccatggtcat taacttataa tttatttcag caattgcagt ctgaaccaaa
      841 aaatggtaat gctgatattt attgggtaaa atctgatttt attgaagatc tgaaggctaa
      901 agccgtactc gcaaatgcaa aatagctgtt aaacaatcaa tatttcaatc ctgaattttt
      961 caagtatttt caattaattc ttatcattcc tatttgaaaa gactgaaaca ttgatgatgt
     1021 gaattggaag aaatgttaaa cattattaag attttcaacc aataagacaa attgattgta
     1081 catttgcatt ccaaaaaaat agaatacaaa gatgaaacag ttatttaaac cccccgtatt
     1141 gatattgact ttagcaataa ttattacttc atgcggcggg agtcctgaaa aagaattgat
     1201 tggcacatgg aaggcacaaa aggttgaaac agattttgat gaacaattca caacacccga
     1261 aatgctacgc caggttgtag aaatgcaaaa agaaacgtat ttcagaatta tcgatgattc
     1321 aacactaata attatttcac ctggtaatac ccatgaaaca aaatggagtc ttgatcctga
     1381 cgatcagtcc atttcatatt tttttgatag tagcccaaac cagcttaata aacttggaac
     1441 tttttcatcg gacaaaatag tgtctgaaac aaatactccg ataggaaaaa tcactattta
     1501 ttacgaaaaa gaatagggct tataattgac agaaaattaa attttaggtg ttaacctcct
     1561 gcttcatact tccgacttaa cacctttctt tttcttccgc aaatacccct gcgtaaaagc
     1621 aattagaata agcaaagcac ttacaaaggc tgatattctg gcaataaaat ctccgttttt
     1681 agtataatat gttaattcat aatttgcatt taaagcttgc tgaataactg caggcttcca
     1741 atattgagtt tgctgaagta tatcacctcg ttgattaata aatgctgata tacctgtatt
     1801 tgcagatctt gcaacactgc ggcgggtttc aatggcccta agtactgaaa acaaaaaatg
     1861 ttgtctatat ccaggtgtat caccccacca accatcatta gtaataacaa atattaatcc
     1921 ggcacctaat tttatcgagt tagcaacaaa ttctccataa acagattcat agcaaattat
     1981 tggagtaatg atagctgtat caccatttga tttattaaat acaaccggat gatcttcttt
     2041 gccaagcgta cctgtggttc ccccaagatc aattgcaaat ttttcaattg gctttagtat
     2101 ccaccatgaa
//
LOCUS       DASCQP010000515         4204 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001859685, whole genome shotgun sequence.
ACCESSION   DASCQP010000515 DASCQP010000000
VERSION     DASCQP010000515.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4204)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4204)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4204
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001859685"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..467)
                     /locus_tag="QF480_08800"
     CDS             complement(<1..467)
                     /locus_tag="QF480_08800"
                     /inference="COORDINATES: protein motif:HMM:NF017828.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacyl-CoA dehydratase"
                     /protein_id="HJN06701.1"
                     /translation="MSGKVEKEKSMILQKEMIGGLFKELGNAKQSGKKVVYTFVPGNL
                     SELIRSFDMLPVYPEINALQSGMRKKSDEYIKEAEKWGHSEDVCTYVKCDVGMMLKGN
                     IGPTGEKIPDPDLLLLSYTGCFTFLKWFENLERLYPGVPVALIHTPYQENGEIT"
     gene            complement(537..1703)
                     /gene="bcrC"
                     /locus_tag="QF480_08805"
     CDS             complement(537..1703)
                     /gene="bcrC"
                     /locus_tag="QF480_08805"
                     /EC_number="1.3.7.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR02263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018522 - benzoyl-CoA reductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="benzoyl-CoA reductase subunit C"
                     /protein_id="HJN06702.1"
                     /translation="MSKLKELTNKCESLAFDLNFNAAKKWKSEKENRVLIGYMPIYFP
                     REIIHAVEGLAVGIMGGGDRKQIIVGDAYYQSYICHIPRGIIEMALSGHFEKFDGFVF
                     PSICDVIRNLSGMFQLSNIGKFAKYMDFPQDFNSEIGGEFYITEMNSVLSKIKEINGV
                     ELTTEALNNSITLFNKNRQLIEEIYNIRQSFPWRLSAVDTYHIVRAGMVIPVEEHNKI
                     LEEVLVEIRKDIGQQLDKIKVVVSGSFCEQPPVSLIKTIEMAGCYILDDDFMQGSRWI
                     QGDVDDQSNNPLEALAEAYINSSTFSSSVYDVDNHKGARLINLVKMRDADGVIFAAPS
                     FCDPALLDNPLYNIECEKENIRYINFQYHENIGQFKVIKEQVGAFSDSIKLWEA"
     gene            complement(1924..3114)
                     /locus_tag="QF480_08810"
     CDS             complement(1924..3114)
                     /locus_tag="QF480_08810"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: protein motif:HMM:TIGR01930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003985 - acetyl-CoA C-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
                     /protein_id="HJN06703.1"
                     /translation="MELNDIVAISACRTAMGKFGGTLKDIPAYDLGAVVIKEALKRAS
                     ITGEQVDDVILGSCRQAGNGPNPARTASVKGGVSLSAPVITLNMACPSGMRAVALASQ
                     SLRLGEADIVMVGGFDSMSSIPYLLKGARWEGFKMGNKVIEDGWSDSIDPLIGQGMGD
                     TAENLYDKYKISREKQDEFAVGSHLKAYEAQKNGWFDEEIVPVEIPATRRTPAIIFDK
                     DETIRHEINKEKMAKMRPAFRKDGTVTAANACGLSDGATAIVFTTRKMAEQLGVKPLF
                     SIVSYAQVAVDPSTMGEGPALSIPAALEKAGMTLDQMDLIEVNEAFAIQVLANEHELN
                     WDPTKLNVHGGAIALGHPTGISGARILVTGYHALKRLEKTYCVAGICGGGGVSTAMII
                     KRES"
     gene            complement(3144..3917)
                     /locus_tag="QF480_08815"
     CDS             complement(3144..3917)
                     /locus_tag="QF480_08815"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006841539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase family protein"
                     /protein_id="HJN06704.1"
                     /translation="MEKRNYANISMNLEGKSAIVTGGSLGIGAAIALKLAECGANVAI
                     NYRKHKEEAEEVINQINAMGVKGLLVQADISNYEDAARMIETATNEFGGIDILVNNAG
                     INWDGVIWKMSEEQWDSVININLKGYFNYIRAVSPIFREQKSGKIVNITSINGMRGKF
                     GQSNYTASKAGIIGLTKTVARELGKYGINVNAIAPGLIETDMMKNADESVRTAAIADI
                     VINRIGQPEEVANVTAFLSSDLSRHITGECIKVDGGQYI"
     gene            complement(3936..>4204)
                     /locus_tag="QF480_08820"
     CDS             complement(3936..>4204)
                     /locus_tag="QF480_08820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06705.1"
                     /translation="NADLHNYLIATSADMPEINSTIVDSYEPEGPFGAKEIGEGATLP
                     ILGAIANAIANAIGVQIFELPITPEKVLKAIRSKTENSIPDHKN"
BASE COUNT         1219 a          907 c          639 g         1439 t
ORIGIN      
        1 gttatttctc cgttttcctg atatggtgta tgaattaagg caactggaac cccaggataa
       61 agcctctcaa ggttttcgaa ccatttgagg aaagtaaaac agcccgtgta gcttaatagc
      121 aacaaatcgg gatcaggtat tttctcgcca gtaggaccga tatttccttt aagcatcatt
      181 cctacatcac actttacata agtacaaaca tcttccgaat gaccccattt ctcagcttcc
      241 tttatatatt catctgattt tttcctcatg ccagattgca aagcattaat ctcaggataa
      301 actggaagca tatcgaatga acgaattagt tcagacagat ttcctggcac gaatgtgtaa
      361 acaacttttt taccactttg ttttgcgtta cctaattctt taaataatcc cccaatcatt
      421 tccttttgaa gaatcatact tttttctttc tctacttttc ccgacatatt tattatttat
      481 tcaatttctt atttaattct atctaaaaaa atgcatttct aaaaagggaa tatatgctat
      541 gcttcccata gtttgattga atcggagaag gctccgactt gttcctttat tactttaaac
      601 tgtccaatat tttcgtggta ttgaaaattt atatatctga tattctcttt ttcacattca
      661 atgttatata atggattatc tagcaatgct ggatcgcaaa aacttggtgc agcaaaaata
      721 actccatcag catctctcat ttttacaagg tttataagtc ttgcgccttt atggttatca
      781 acatcataaa cagatgacga aaatgtacta ctatttatat atgcctcggc aagagcctct
      841 aatggattat tggattgatc atcaacatca ccctgtatcc aacgcgatcc ttgcataaaa
      901 tcgtcgtcga ggatataaca tccagccatt tcaatagttt ttattaaaga aaccggaggt
      961 tgctcacaaa atgaacctga tacaacaact ttaattttat ccaactgctg accaatgtcc
     1021 ttccttatct caacaagaac ctcttcaagg attttgttat gttcctcaac cggaataacc
     1081 attccagctc taacaatgtg gtacgtatcg acagctgaca atctccacgg aaaagattgt
     1141 ctaatattat atatttcttc gattagttgc ctgtttttat taaacaatgt aatagaatta
     1201 ttcagcgcct cggttgttaa ttcaactccg ttaatttctt taattttaga gaggactgaa
     1261 ttcatttcag taatataaaa ttctcctcct atttcagaat taaaatcctg aggaaaatcc
     1321 atatattttg cgaattttcc aatattggat aactgaaaca tccctgataa attgcgaata
     1381 acatcacaaa ttgatggaaa aacaaaaccg tcaaattttt cgaaatgacc tgataatgcc
     1441 atttcaataa tcccacgtgg aatatgacat atgtatgatt ggtaatatgc atcaccaact
     1501 ataatttgtt ttctgtcacc gccgcccata attccaacag caagcccttc aacagcatga
     1561 atgatttctc tggggaaata aattggcata tagcctatca ggactctatt ttccttctct
     1621 gatttccatt tttttgctgc attaaaattt aaatcaaatg caagactttc gcatttattc
     1681 gtaagttcct ttaattttga catctcaaga tataaactgt gttattttga aaaaatttat
     1741 gctaaaatat agcttttttt ttattatgcg cattggcatt ctttcttaaa gaataaagcc
     1801 aattataatt ttcctagaat aagtaccatc aacttgataa gatgatgatg aataaaaaaa
     1861 ttcagttgtt cctggaactg ttgtaggtaa tagaaaacgg atagaataat ataatgatga
     1921 attttaagat tctcgtttta ttatcatcgc ggtactaaca ccgcctccgc cacatatgcc
     1981 agccacacaa taagtttttt ccaggcgctt taatgcatga taccctgtta caagtatacg
     2041 agcaccacta attccagttg gatgtcctaa tgcaatagct cctccatgaa cattaagttt
     2101 tgtaggatcc caatttaact cgtgttcatt tgcaagtact tggatagcaa aagcttcatt
     2161 tacctctatc agatccattt ggtctaatgt cattcctgct ttttctaaag cagcaggtat
     2221 agaaagagca ggaccttcac ccatggtgga gggatcaact gctacttgtg cataggaaac
     2281 tatagagaat aatggcttaa cgcccagctg ttcagccatt ttcctggttg taaatacaat
     2341 agccgttgca ccatcactta acccacaagc attcgctgct gtaaccgtcc cgtcttttcg
     2401 aaaagctggc ctcatcttag ccatcttctc tttatttatc tcatgtcgga ttgtttcatc
     2461 cttgtcaaaa attattgctg gtgttctcct ggttgccgga atttcaaccg gaacaatttc
     2521 ttcatcaaac catccatttt tctgtgcttc ataagctttt agatgactgc caacagcaaa
     2581 ttcatcctgt ttctctctgg aaattttata tttatcataa agattttctg cagtatcacc
     2641 cattccctga ccgatcaatg ggtcaatact gtcgctccag ccatcttcaa taactttatt
     2701 tcccatttta aatccttccc acctagcgcc ttttaacaaa tatgggattg agctcatact
     2761 atcaaatcct ccaaccataa caatatcagc ctcaccaagt ctgagagatt gagaagccaa
     2821 agctacagct ctcataccag aaggacaagc catattcaaa gtaattacag gagctgataa
     2881 agaaactcca ccttttacag aagctgttct tgcaggatta ggtccatttc ccgcctgacg
     2941 gcagcttccc aaaataacat catctacctg ttcaccggta atggatgccc tctttaacgc
     3001 ctcttttatt actactgctc caagatcata agctggaata tctttgagtg ttccgccaaa
     3061 ttttcccatt gctgtcctac atgccgatat ggctactata tcatttaact ccatggttta
     3121 tatcgttttt gaaatgaata ttattaaata tattgacctc cgtctacttt tatgcattca
     3181 ccggttatat ggcgagacag atcagaggat aggaatgctg tgacatttgc tacttcttcg
     3241 ggctgtccga tcctattaat cacaatatct gcaattgctg ctgtacgcac actttcatcc
     3301 gcatttttca tcatgtcggt ttcaataagt cccggagcaa tcgcgttgac atttatacca
     3361 tattttccta actctctggc aacagttttc gttagcccaa taattccagc ttttgatgca
     3421 gtataattag actggccaaa ttttccccgc attccattga tagatgtaat gttgacaatt
     3481 tttcctgatt tttgctccct gaagattggt gataccgcac gaatataatt aaagtaccct
     3541 ttaaggttaa tgtttattac gctatcccat tgctcttctg acattttcca tatcactcca
     3601 tcccagttaa ttccagcatt atttacaaga atatcgattc ctccaaattc atttgtagca
     3661 gtttcaatca ttcttgctgc atcttcatag ttagaaatat cagcctgtac taaaaggccc
     3721 ttcactccca tggcattaat ctggttaatt acttcttcag cctcttcttt atgttttcta
     3781 tagtttattg cgacattagc cccacattca gccagtttta gggcgatggc tgcaccaatt
     3841 cccaagctgc caccagttac aattgctgac ttgccttcca aattcatgct gatattagcg
     3901 taatttctct tttccattgg ttctattttt taatattaat ttttatggtc tggtattgaa
     3961 ttttctgtct tagagcgaat tgcttttagt actttttcag gagtgatagg taattcaaat
     4021 atttgaaccc cgatggcgtt ggcaatagca tttgctatag ctccaaggat tggtaacgtt
     4081 gctccttcac caatttcttt agcaccaaaa ggtccttcgg gctcataact atcaacaatt
     4141 gtagagttta tttctggcat atcagccgat gtggcaataa gataattgtg aagatctgca
     4201 ttca
//
LOCUS       DASCQP010000516        10448 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001859813, whole genome shotgun sequence.
ACCESSION   DASCQP010000516 DASCQP010000000
VERSION     DASCQP010000516.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 10448)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10448)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10448
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001859813"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..715)
                     /locus_tag="QF480_08825"
     CDS             complement(<1..715)
                     /locus_tag="QF480_08825"
                     /inference="COORDINATES: protein motif:HMM:NF020134.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketoacyl-ACP synthase III"
                     /protein_id="HJN06706.1"
                     /translation="MAIFQVPNIKIVGISACVPEAEFDNNNYDWISEKERETLIKTIG
                     VEKKRHAKKGTTTSDLCNIAADNLINDLNWNRAEIDLLIFISQSRDYIIPATAGLLQE
                     KLSLSHTCIAFDISLGCSGYVYGLSVIGSMIATGKIKKGLLLTGDISTLNTSYQDKSA
                     FPLFGDAGTATAVELNNDANSMMFNLQTDGSGYDAIIIPDGGIRNFANKNTSFEYHKI
                     SDGIFRNNFNIALDGIKVFN"
     gene            complement(716..958)
                     /locus_tag="QF480_08830"
     CDS             complement(716..958)
                     /locus_tag="QF480_08830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopantetheine-binding protein"
                     /protein_id="HJN06707.1"
                     /translation="MNITDFIKKIEEEFEDIQPNSLSLNDILEDKFTWDSINALIFLA
                     HVNVEYDVEITADELIKSVTVNDLFVLVESKYQKTE"
     gene            complement(1056..2435)
                     /locus_tag="QF480_08835"
     CDS             complement(1056..2435)
                     /locus_tag="QF480_08835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06708.1"
                     /translation="MKRLLRFIKTNISLATIIVLIISLCIIIFRTGLYKDTDKVFVND
                     VLSYYGYLPITFIHSDFTAVTIDLKANPKIWTHPTTTGKRALKYSMGMAILYSPFFFV
                     SHFYSHMFGLDTSGFSIPYQFALLISSLIYLSIGLLFLRKLLLIYFDQITVSITLIVI
                     VFGTNLLQYVTYRAPVSHAYSFALYSVFIYFTLMWHRKPNFKRSIILGVLSGVITLIR
                     PSNIVIILFFIFYNIFSVTDAKNKAIFFLKEYKQLLIFLLFSIIIWIPQILYWKSVSG
                     NYLYYSYLDEGFFFSNPQIYRGLFSYRNGWLTYTPVIVFALVGIFMLIKRHQEFFIPI
                     LMFTIINAYIILSWWCWWYVGYGNRAFIESYALLSIPLATFLSWVFDKKVLKIIIVPI
                     IAFLVFLNSFMVWQFNNGMGHYDSMTKEAYWKYFLNVNRTDRIWKYIKHPDYGKAKKG
                     IYSTVNKKE"
     gene            complement(2444..5383)
                     /locus_tag="QF480_08840"
     CDS             complement(2444..5383)
                     /locus_tag="QF480_08840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="right-handed parallel beta-helix
                     repeat-containing protein"
                     /protein_id="HJN06709.1"
                     /translation="MRNTVFHFDKKVICDAEKLTETGNLFIAANDSAEFFTGGKLRTN
                     LEAHSGKYSVLTTPKKSPYALKYIIKCNIPDKYINVSIWRKSKDGNGVLVITGNNNEI
                     LYYASKTPVEISDDGWEKLEVDVYTPPDFEGDTLKIYVWNNSAYDVFFDDLVIEPKPN
                     KQYPDYNYFEGLEIVLDSSDYLKIIEKRKRAFEKGILQTSDNDWVKSIIVDNDKAMKA
                     RVRLKGDWLDHLWGDKWSYRVKMRKKNTFNQLRTFSLQTPASRNFLMEWLTHRLYREN
                     DNLTTRYGFIPLKFNNEPRGIYVWEEHFTKQLPEWNNRREGPIVKFSEDPFWQIQLIN
                     INAKKWPAFPYYQAATIEPFGKTRTVENPVLFKQFLNAQKLMNQYKYQQKTPSEIFDL
                     DRIASYYAMLELTHARHGMVWHNQRMYYNPVLCKLEPIAFDGYTDHDEPNLTIDDNMA
                     YRAFTHKEPLIVQDHLILNLFADTLFLNSYLHYLVKYSNPEFIRTFMKSSEPKVLYYD
                     SLLRLEFPYYHYNDSLLINSAKAIRDYIPELKEIINDSLGDGKFDFKVVHEVFSDSSV
                     YENTPEFFVNVYTESKNDDTSSLSIYNYFPRELVFLGTGEVNKLITDYFIDTPTLSAF
                     SSGMTGQILNIKADTSANYMFFMIRGLMDTYSVPIMPWPFPKGITPQQELWEKIDLNN
                     EFFEKISGNNIYVKSGMITIDEPIIIPGGYTVNFSAGTRINLVDSAMIISYSAIHMKG
                     TKDDPVVITSSDFSGNGFTILQADGMSIIENAIFENLYALNYHSWKLTGALTFYESDV
                     TIINTKFYRNQCEDALNIIRSDFILSNSSFNNIYSDAFDADFSTGIVENNFYTNISND
                     AMDFSGSEITTIDSEVYGAKDKGISGGENSKLTIINTSILNSNIGVASKDLSIIEMID
                     SKVIACNYGLVLLQKKPEYGPSIMILKNTFMLDLKVEMLIEDNCKVNVNDSTIYGKEK
                     NLGEIFY"
     gene            complement(5683..7932)
                     /locus_tag="QF480_08845"
     CDS             complement(5683..7932)
                     /locus_tag="QF480_08845"
                     /inference="COORDINATES: protein motif:HMM:NF020337.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CotH kinase family protein"
                     /protein_id="HJN06710.1"
                     /translation="MRWFIILFLLLVGVTALKGQPTFPDNGPLFVDTTVPRIDITINP
                     DTLNWLYQNENLESDIEFTARFIFNNGVILDTIEPVGFRLRGNTSRYSQKKSFKVSFN
                     RFTSGGKYFGVEKLNLNGEHNDPSVIRSKVCWDIFRKLDIPAPRSNHVEVYINNDYYG
                     LYISVEHIDEEFVKSRFTNNDGNLFKCLYPADLNYLGEDPDLYKFEPYGRRAYDLKIN
                     KEADDYTDIANFIDVLNNTVSNELKCDLDEVFNTYDYLKVIAADILVGNWDGYIYNQN
                     NFYLYNNTVSNKFEFIPYDYDNTLGIDWLNRDWGTRNMYDWAQHGSNYRPLYERLMSD
                     QELRDQYTFYMNRIVTETLDIDSLITAIEQRRDMIAPYLVNDSYYPRDYGYNMDDFYN
                     SYNNALGGHVDYGLFPYLQTRMSSIINQLENTEMNPVIKYIKHQKISPTEAQVVAFIE
                     VQNNPANVSLEFSLDGSNWNSTIMYDDGNHNDGLAGDMIYGATITGMIEDNETLYQIF
                     ADDSHGNSNLMPCEPVIINAVDETPLLFINEIMASNESTIADEHGNYNDWIEVYNGSD
                     NAIWLGNLYLTDNLDASNKWLMPDFTLGSGGFVLFWADSDPEAGEFHTNFKLSKDGED
                     VGIFTENQSVIDEIVFGEQTTDISYGRKYDGNINWVLFNTPTPGSTNIPDGISDVIGV
                     DQFVLYPNPVSGDVVTMSKNINYKVYNIFGQIIGEGNNSNQINVSAYNKGIYIVISDG
                     GSKMKLIVN"
     gene            8335..9228
                     /locus_tag="QF480_08850"
     CDS             8335..9228
                     /locus_tag="QF480_08850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HJN06711.1"
                     /translation="MKFLISILFILIVNLVISQTNPQAKFSESNNKISFLFSGHAWQS
                     GSNGSKTDYRLEQLDKNLYTGVWLGGDVCSEAMLEYSTIQYVDSIFDLGNPDTHWALG
                     NHDARNGNWEWYEEFTGRKTYYAYSSFGITRIVMNTNLVPTKCEMIVDQYDIISSVCD
                     TIQQSSYLILLMHHNLWRDIPNLPNPFTYSQSDLRYWNANCDSANTNFVTIIYPKLLE
                     VYQRGIDVICVLGDMGSGPKKFQMDSEDGIHFLGCGLDQNNPDDLILIFNYDSVTKQL
                     EYDFHNLDSLLSVQNRQQELK"
     gene            9234..>10448
                     /locus_tag="QF480_08855"
     CDS             9234..>10448
                     /locus_tag="QF480_08855"
                     /inference="COORDINATES: protein motif:HMM:NF015585.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sialate O-acetylesterase"
                     /protein_id="HJN06712.1"
                     /translation="MRYTLIVILILIGTSSISQVTFISIPLDKQLIGRDPITNLGNIA
                     IDGEVDNSNISYDSILIEVFRNNILHQKTSQFLSYSSHIASFNFNISIVAELVNYSLK
                     IYGKSGSIATLQKQVDSIVAGDAYIIQGQSNAEARMLSGSANSNQNEFIRVYANGTHF
                     KDTLLNNDNWYIGEGDGNRNTNGNTGQWGLKLARMLIDSLNIPIAIFNSGHGGKDIAF
                     FQAPSDYQTSQESNYGRQYYRLNKTGLKDFVRAVFWSQGTWDGENYSNTSTLEYKNYF
                     LSLKSDWLRDYPSLEKYYIFQTKNGCGGFLHKIKEAQRQLAFENQDISIMSTAALIHY
                     EDDCHFPFINGYESFAKRIFPLVLRNFYGITTSNEIDPPMIVSANLINDTTLIVETDA
                     DELSIQTIAEDFE"
BASE COUNT         3518 a         1841 c         1593 g         3496 t
ORIGIN      
        1 aattaaagac cttgatacca tctaatgcaa tgttaaaatt gttcctaaat ataccatcgc
       61 taattttatg atattcaaaa gaagtgtttt tatttgcaaa attcctgata cccccatctg
      121 gaataataat tgcatcgtaa ccactcccat cagtttgaag attgaacatc atcgagttag
      181 catcattatt caactcaacc gcagtggcag tacctgcatc accaaaaagc ggaaacgcac
      241 ttttgtcctg ataagatgtg tttagagtgc tgatatcacc tgttaaaagt aatccttttt
      301 ttatttttcc agttgcaatc atactaccaa taaccgacaa tccataaaca taacccgagc
      361 agccgagact gatgtcaaat gcaatacatg tatgagaaag ggaaagtttt tcctgcaata
      421 gaccagcagt tgcaggaatt atgtaatcac gcgattgcga aataaatatc aatagatcta
      481 tttctgcacg gttccaatta agatcattga tcagattgtc tgctgcgata ttacataaat
      541 cagaagtagt ggttcctttt ttggcgtgtc tctttttttc tacaccgatt gttttgatca
      601 atgtctcccg ttctttttca ctaatccaat cataattatt gttatcaaac tcagcttctg
      661 gaacgcaggc tgatatacca acaattttaa tatttggaac ctgaaaaatg gccacttact
      721 ctgttttttg atactttgac tcgactagta cgaataaatc atttacagtt acagatttga
      781 taagttcatc cgctgtaatt tcaacatcat attcaacgtt aacatgagct aaaaagatta
      841 acgcattaat agaatcccat gtgaatttat cttctaatat atcattgagt gataagctgt
      901 tcggctgtat atcttcaaac tcttcttcta tcttttttat aaaatccgta atgttcatat
      961 ttatttattt ttcggcaaaa ataatcttta attaataact tcaagttttt atcaaccatt
     1021 ataagcattt taaaaacatt cattctgatc gtatcctatt cctttttatt aactgtagaa
     1081 taaattccct ttttagcctt cccataatca ggatgtttaa tatatttcca tatacgatct
     1141 gttcgattaa cattcaaaaa gtatttccaa tatgcttctt ttgtcatgct atcataatgc
     1201 cccattccat tgttaaactg ccaaaccata aaactattta aaaacactaa gaatgctata
     1261 ataggcacaa tgataatttt caacactttt ttatcgaaaa cccatgaaag aaaagttgcc
     1321 aatggtattg atagcaatgc ataagattcg atgaacgcac gattgccgta gcctacatac
     1381 caccaacacc accatgatag aatgatgtaa gcattaatga tggtgaacat tagtatggga
     1441 atgaaaaact cctgatgacg cttgatcaac ataaatatgc caactagagc aaaaacaatt
     1501 acaggcgtat atgttaacca gccatttcga taactaaata atcctctgta aatttgtgga
     1561 ttactaaaga aaaaaccttc atcaaggtag gagtaataca aatagtttcc gctaaccgat
     1621 ttccagtaaa gtatctgtgg tatccaaata ataatagaaa aaagaaggaa tatcaaaagt
     1681 tgtttatatt cttttaaaaa gaaaattgct ttattcttag catcagtcac gctaaatata
     1741 ttataaaata tgaagaacaa aataattaca atgttagatg gccgtataag ggtgattacc
     1801 cctgaaagta cacctaaaat tattgatctt ttaaaattgg gttttcgatg ccacattagg
     1861 gtgaaataaa taaaaactga ataaagtgca aaactgtatg catgtgaaac tggtgccctg
     1921 taggtgacat attgcaacag gtttgttcca aatactatta caataagagt tattgaaact
     1981 gttatttgat caaaataaat caacaataac tttctaagaa acaacaaacc aatagataaa
     2041 taaataagac tgcttattaa caatgcaaac tgatacggga tactaaatcc cgaagtatca
     2101 agtccaaaca tgtgtgaata aaaatgactg acaaaaaaga atggactata aagtattgcc
     2161 atacccatgg aatatttcaa agctcgttta ccagtagtcg ttggatgagt ccaaatttta
     2221 ggattggctt ttaaatctat tgtaaccgct gtgaaatcac tatgtataaa agtaattggt
     2281 aaataaccat aataactaag cacatcgtta acaaatacct tgtcggtgtc tttataaaga
     2341 cctgtcctga atataattat gcacaaagaa attattaata caatgattgt agcaagagaa
     2401 atatttgtct ttatgaacct taataatctc ttcatatttt aaattaataa aaaatctcac
     2461 ctagattctt ctccttacca tatattgtgc tatcattaac atttacctta caattatctt
     2521 caattagcat ttcaactttt aaatccaaca taaatgtatt cttcagaatc attattgatg
     2581 gtccgtactc aggttttttt tgcagaagta caaggccata gttacaagct atcactttcg
     2641 aatcaatcat ctcaataatt gacaaatctt tcgaagcaac gccaatattc gaatttagaa
     2701 ttgatgtatt aataattgtg agctttgaat tttctccacc gctaataccc ttatcttttg
     2761 cgccataaac ttctgaatct atagttgtaa tttcacttcc cgaaaagtcc attgcatcat
     2821 tactaatgtt ggtataaaaa ttattctcaa ctattccggt actaaaatct gcatcgaatg
     2881 catcactata aatattgttg aatgacgaat tactaagtat aaaatctgat cttataatat
     2941 ttaaagcatc ctcgcactgg ttacgataaa attttgtgtt aataatggtc acatccgatt
     3001 cataaaaagt aagagcgcct gttaacttcc agctgtggta attaagtgca tataaattct
     3061 caaatattgc attctctatt atcgacattc cgtcagcttg aagtatggta aaaccatttc
     3121 ctgaaaaatc agaagatgta attaccacag gatcatcttt tgtacctttc atgtgaattg
     3181 ctgaataaga gataatcatt gcactatcta caagattaat tcttgtgccc gctgaaaaat
     3241 taactgtgta tccacctgga attataattg gttcatcaat tgtaatcatt ccacttttaa
     3301 cgtaaatatt atttccagag atcttttcaa aaaattcatt attcagatca atcttttccc
     3361 ataattcctg ttgaggagtg ataccttttg gaaatggcca tggcattatt ggaactgaat
     3421 aagtgtccat cagtcctcta atcataaaaa acatgtagtt agccgaagta tctgccttaa
     3481 tattaagtat ttgtccagtc ataccacttg aaaaagctga cagtgttggc gtatctataa
     3541 agtaatccgt aattagctta ttgacctctc ctgttcctag aaatactaat tcacgcggga
     3601 aataattata aatactcaaa cttgaagtat catcattttt agattcagta taaacattaa
     3661 cgaaaaactc tggtgtattc tcatacacgc tcgaatcact aaaaacttca tgaacaactt
     3721 taaaatcaaa tttaccatca cctaaactgt cattaataat ttctttcaac tccggtatat
     3781 aatccctgat ggctttagca ctattaatca ataggctatc attataatga taatacggaa
     3841 attccaacct caataatgaa tcataatata atactttggg ttctgaagat ttcataaagg
     3901 ttctgataaa ctcaggatta ctatatttaa ctaaatagtg caaataactg ttaagaaaaa
     3961 gcgtatcagc aaataaattt aaaataaggt gatcctggac tattaaaggc tctttatgtg
     4021 taaaagctct gtaggccata ttatcatcaa tagtaaggtt aggctcatca tgatcagtat
     4081 aaccatcaaa cgctatgggt tcaagtttgc acagtacggg attgtaatac atcctttgat
     4141 tatgccaaac cataccatgc cgggcgtgag taagttcaag catagcatag taactggcaa
     4201 ttctatcaag atcaaatatt tcagaaggtg ttttttgctg atatttatat tgattcatga
     4261 gtttttgagc attaagaaat tgcttgaaaa gaacaggatt ttcaacggtt ctcgtttttc
     4321 caaatggttc gatagttgca gcctgataat atgggaaagc cggccatttt ttagcattaa
     4381 tgtttatcaa ttgaatctgc cagaagggat cctcagagaa tttcacaatt ggtccttcac
     4441 gacgattatt ccattctggg agctgtttgg taaaatgttc ttcccaaaca taaatacctc
     4501 ttggttcatt attaaatttc agtgggataa atccataacg agttgttaga ttatcatttt
     4561 cgcgatataa cctatgtgtt agccactcca tcaaaaaatt tcttgacgcc ggtgtttgca
     4621 atgagaaagt tcgtaactgg ttaaaagtat ttttctttcg cattttaact cgataggacc
     4681 atttatcgcc ccataagtgg tctaaccagt cacctttaag tcttactctg gctttcatgg
     4741 ccttatcatt atcaacaata atacttttga cccaatcgtt atcagatgtt tgtaaaatgc
     4801 ccttttcaaa ggctcgtttt cttttctcaa ttattttcaa ataatctgaa gaatcaagca
     4861 cgatttccaa tccttcaaaa taattgtagt ccggatattg cttattgggt ttcggttcta
     4921 ttacaagatc gtcgaagaac acatcatagg cactattatt ccaaacatat atctttaatg
     4981 tatcaccctc aaaatctggc ggagtataca catcaacttc cagtttttcc caaccatcat
     5041 cagatatttc aacaggcgtc ttggaggcat aatataggat ttcattatta ttgccagtta
     5101 taacaagtac tccatttcca tctttcgact tgcgccaaat gctaacatta atgtacttat
     5161 caggtatatt acattttatt atatatttca acgcataagg gctcttttta ggagttgtaa
     5221 gaactgaata ttttcctgaa tgagcttcaa gattagttct taactttcca ccagtaaaaa
     5281 attcagcaga atcgttggca gcaataaata aatttcctgt ttctgtaagt ttctcagcat
     5341 cgcaaataac ttttttatca aaatgaaaaa cagtatttct cacacatgag gacaacacca
     5401 tcaaaaaaca taatccggtt aatatatttg ttagtttcag atatttatta gaaataatca
     5461 cttcttaaaa gagtatttat cgataattta gcgatgttac aaagatatga ttttgtaacg
     5521 agctagtatc tataattaga agtgtcagta gtatatttga ctacatcctc catttaagga
     5581 gagacttggg taatttattg ggaacttgaa cgcttatttt atcttttttt atccctggga
     5641 taataatgtt tgaattgagg aaaaagccgt tgatttgatg agttaattaa cgattaactt
     5701 cattttactt cctccgtcag aaatcacaat gtaaattccc ttgttatatg cagagacatt
     5761 aatttgatta gaattattac cctcaccaat aatttgtcca aagatgttgt aaactttgta
     5821 gttaatattc ttactcattg taactacgtc acctgaaaca ggatttggat aaagtacgaa
     5881 ctgatcaact ccgatcacat cactaattcc gtcaggaata tttgttgagc ctggtgtagg
     5941 tgtattaaat aatacccaat taatatttcc atcatatttt ctaccataag aaatgtctgt
     6001 agtttgttca ccaaaaacta tctcatcaat aacactctgg ttttctgtaa aaatgccaac
     6061 atcttcacca tctttgctaa gcttaaaatt tgtatgaaat tcacctgctt caggatcact
     6121 atccgcccaa aacagcacaa aaccacctga tcctaatgtg aaatccggca ttaaccattt
     6181 gttcgatgca tcaaggttat cagttaagta aagattgcca agccaaattg cattatcact
     6241 accattgtat acctcaatcc agtcgttgta attgccatgt tcatctgcta tggtactttc
     6301 atttgaggcc attatttcgt tgataaaaag taggggagtt tcatctacag cattgattat
     6361 gacaggttca caaggcatta gatttgaatt accatgtgaa tcatctgcaa aaatctgata
     6421 aagagtttca ttatcttcaa tcattcctgt tatagttgca ccataaatca tatctccggc
     6481 aaggccatca ttgtgatttc catcgtcata catgattgtc gaattccaat tactgccatc
     6541 taatgaaaat tcaagactca catttgccgg gttattctga acctcaataa atgcaacaac
     6601 ctgagcctct gttggtgaaa ttttttgatg tttaatgtac tttataaccg gattcatttc
     6661 cgtgttttcc agctggttaa taattgaact cattcttgtt tgcaggtaag gaaacaaacc
     6721 atagtcaaca tgtccaccga gggcattgtt gtatgaatta taaaagtcat ccatattgta
     6781 tccataatct cttggataat aagagtcatt tactaaatac ggagcaatca tatctctacg
     6841 ctgctcaatt gctgtaatca atgaatcaat atcaagggtt tcggttacaa ttcggttcat
     6901 atagaatgtg tattggtcac gtaattcctg atcactcatc aatcgttcat ataatggtct
     6961 gtaattgcta ccatgttgag cccaatcgta catgttacgt gttccccaat cacgattcaa
     7021 ccaatctata ccaagtgtgt tgtcatagtc gtaagggata aactcgaatt tgttactaac
     7081 tgtgttattg tatagataaa agttgttttg attgtatata tatccatccc aattaccaac
     7141 gagtatgtct gccgcgataa cttttaaata atcatatgta ttaaaaactt catccaggtc
     7201 acatttcaat tcattagata cagtattgtt tagtacatca ataaagttcg caatatctgt
     7261 ataatcatca gcttctttat ttatttttag atcatatgct cgcctgccat atggttcaaa
     7321 cttatataga tcaggatctt cacctaaata atttagatct gcagggtata ggcatttaaa
     7381 aaggttgcca tcattgtttg tgaaacgcga ttttacaaat tcttcatcga tgtgttctac
     7441 actaatatat aagccataat aatcgttatt gatatatacc tccacatgat ttgacctggg
     7501 agccgggatg tctagtttcc gaaatatatc ccagcatact tttgatcgta ttaccgatgg
     7561 atcattatgt tctccattaa gattgagctt ttctactcca aaatattttc ctccagaagt
     7621 aaatctatta aatgaaactt tgaatgattt cttttgggaa tatctggaag tattacccct
     7681 taacctgaac ccaacaggtt cgatagtatc gaggattaca ccattgttaa aaatgaatct
     7741 tgcagtaaat tctatatcac tttccaaatt ttcattttga tacaaccaat tcagtgtatc
     7801 aggattaatc gtgatatcaa ttcttggaac tgttgtatca acaaataaag gtccattatc
     7861 cggaaaagtt ggttggcctt taagagctgt tactccaacc aataacaaaa ataatattat
     7921 aaaccagcgc attactaact tggattttag gttgtaaaga taattaataa cataagggaa
     7981 actttaatat tggttactat tgaactgccg ttaattgact cactagcatg agttagttgg
     8041 cactttgatg caaacgtttg ttaacctaaa cactaaattc tgaatctaac aacaattcca
     8101 tcaatcgctt ttcacgggta agttttctaa tggatgaaaa caaaacaatc aaaaactaca
     8161 agttggataa tacatttatt agttccagat atatattgga aaggatgact aataaaagag
     8221 tatttattgt aaatttagcc catcttgcaa agacaggatc ttgtaactag aacgtaccta
     8281 gagtacattg gaatttaatt taaaactgaa ttacatttga ttggcctacc attaatgaaa
     8341 tttttaatat caatattatt tatactaatt gttaatttag ttatttccca aacaaatcca
     8401 caagcaaaat ttagtgagtc aaataataaa ataagtttct tattttccgg acatgcctgg
     8461 caatcaggtt ctaatggcag taaaactgac tatcgtttgg aacaactcga taaaaactta
     8521 tatactggtg tttggttagg cggggatgta tgttcagaag ccatgttaga gtattccacc
     8581 attcaatatg ttgatagcat atttgatctt ggtaatcctg atacacattg ggcacttggc
     8641 aatcatgatg cccgaaacgg gaattgggaa tggtatgaag aatttacagg aaggaaaaca
     8701 tattatgcat atagttcatt tggcataacc aggattgtaa tgaacacaaa tttggttcct
     8761 acaaagtgtg aaatgatagt tgatcaatat gatattataa gctcagtatg tgatactatt
     8821 cagcagtcaa gctatttaat attactgatg caccacaatt tatggagaga tattccgaat
     8881 ttaccaaatc cctttacata ttctcaaagt gacttgagat attggaatgc caattgtgat
     8941 tctgcgaaca caaactttgt taccataatt tatcctaaac tccttgaagt atatcaaaga
     9001 ggtattgatg tgatatgtgt acttggcgat atgggatctg gtcctaaaaa gtttcaaatg
     9061 gattctgaag atggcataca tttcttaggt tgcggattag accaaaataa tcctgacgat
     9121 ctaatattaa tcttcaatta tgattctgta actaaacaat tagaatatga ttttcataat
     9181 ttggattcat tactgtcggt tcaaaataga cagcaagaat taaaataaaa aatatgaggt
     9241 acaccttaat agtaatatta atactaatag gtacttcatc gatcagccaa gttacattta
     9301 tttctattcc attagataaa caattaattg gtagagatcc aattactaat ttgggaaata
     9361 ttgctattga cggagaagtt gataattcaa acatatccta tgactcaatc ctgattgaag
     9421 tctttagaaa taacatactg catcaaaaaa cttctcagtt cttaagttac tcttctcata
     9481 ttgcttcatt taattttaat atttccattg ttgccgaatt agtcaattat tcattaaaga
     9541 tctatggcaa atcagggtct attgcaaccc ttcaaaaaca agttgattct attgttgctg
     9601 gcgatgctta cattatacaa ggtcagtcaa atgcagaagc cagaatgctt tctggaagtg
     9661 ccaacagtaa tcaaaatgaa tttatacgag tatatgcaaa tggtacacat ttcaaagata
     9721 ctctcttaaa caatgataac tggtatattg gagaaggtga tggaaacaga aacacaaatg
     9781 gcaatacagg ccaatggggg ttaaaattag cacgtatgct tattgattcg ttaaacatac
     9841 ctattgccat ttttaatagc ggtcacggtg gcaaggatat tgcctttttt caagcgccat
     9901 ctgattatca aacttcacag gaatctaatt atggaagaca atattaccga ctaaataaaa
     9961 caggtctaaa agatttcgtt agagctgtat tttggtcaca aggaacatgg gatggtgaaa
    10021 attactcaaa tacttctact cttgaataca aaaattactt tttatcgctt aaaagcgact
    10081 ggttaagaga ttatccatct cttgaaaaat attacatttt tcaaactaaa aatgggtgtg
    10141 gaggtttctt gcataaaatt aaagaagcac aacgtcagct agcttttgaa aatcaagata
    10201 tttctattat gtctacagcg gcactaatcc attatgagga tgattgtcat ttccccttta
    10261 ttaatggata tgaaagcttt gcaaaaagaa tcttcccatt ggtgctacgc aacttctatg
    10321 gcataacaac ttcaaatgaa attgatcccc caatgattgt ttctgctaat ctaataaatg
    10381 acaccacttt aattgtcgaa accgatgctg acgaattatc aattcagact atcgctgaag
    10441 attttgag
//
LOCUS       DASCQP010000517         2252 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001863062, whole genome shotgun sequence.
ACCESSION   DASCQP010000517 DASCQP010000000
VERSION     DASCQP010000517.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2252)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2252)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2252
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001863062"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..818
                     /gene="pta"
                     /locus_tag="QF480_08860"
     CDS             <1..818
                     /gene="pta"
                     /locus_tag="QF480_08860"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF004167.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016407 - acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HJN06713.1"
                     /translation="LNISLKNAFIIDPFDNDLIEEYTAEYYRLRKHKGISKEAAKQLM
                     YDVSYLGTMMVHKGHADGMVSGAINTTQHTIRPAFEFIKTKPGTSIVSSSFLMCLEDR
                     VLVYADCAVNPNPDAKQLADIAISSAKTAAMFGIEQRIAMLSYSTGSSGKGKSVEKVR
                     EATEIVKKRRPELKTEGPIQYDAAIDASVAKTKMPDSEVAGKATIFIFPDLNTGNNTY
                     KAVQRSANAVAIGPVLQGLNKPVNDLSRGCQVTDIVNTVVITAIQAQEEDSLF"
     gene            complement(778..1185)
                     /locus_tag="QF480_08865"
     CDS             complement(778..1185)
                     /locus_tag="QF480_08865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013613137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5684 domain-containing protein"
                     /protein_id="HJN06714.1"
                     /translation="MDNDMYGYDGPGTEFWILIIFIIAFYLYVYWRIFEKAGKPGWAS
                     LIPIYNTIILLEIVGKPWWWLLLFFIPVVGIVLAVWMTNLLSLSFGKGIGFTLGLIFL
                     SFIFYPILAFSNAEYIGPGGLKKVSPPPEPESQ"
     gene            complement(1324..2028)
                     /locus_tag="QF480_08870"
                     /pseudo
     CDS             complement(1324..2028)
                     /locus_tag="QF480_08870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004351309.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
BASE COUNT          721 a          408 c          394 g          729 t
ORIGIN      
        1 cattgaatat aagcctcaaa aatgcattta taatagatcc ttttgataac gatctaattg
       61 aggaatatac tgctgaatat taccgactac gcaaacataa aggtatatca aaggaggctg
      121 caaaacaact aatgtatgat gtgagttacc ttggcactat gatggtacat aaaggacatg
      181 ctgatggtat ggtatcagga gcaataaata ctacacagca tacaataaga ccagcgtttg
      241 agtttattaa aacaaaacct ggaacttcaa ttgtgtcaag ctcattttta atgtgcttgg
      301 aggatcgtgt cttggtttat gctgattgtg cagttaatcc aaatcctgat gcaaaacaac
      361 ttgctgatat agcaattagt tctgcgaaaa cagcagcgat gtttggtatt gagcagcgaa
      421 tagcaatgtt gtcatattct actggtagtt caggcaaagg taagtcagtt gaaaaagtta
      481 gagaagcaac ggaaattgtt aaaaaaaggc gacctgaatt aaaaactgaa gggccaatcc
      541 aatacgatgc ggcaattgat gcatcagttg caaaaacgaa aatgccagat agtgaagttg
      601 cagggaaggc gactatcttt attttccctg atttgaatac tggaaataat acatataagg
      661 cagttcaacg ctcagcaaat gcagttgcta ttggtcctgt attacaaggt ttgaataaac
      721 cagttaatga cctgagcaga ggatgtcagg ttacagatat cgtaaatact gttgtaatta
      781 ctgcgattca ggctcaggag gaggactcac ttttttaagt ccccctggtc caatatactc
      841 agcattgcta aaggcaagaa tagggtaaaa aatgaaactc aggaatatta gtccaagggt
      901 aaatccaatt ccctttccaa aactaagcga taatagatta gtcatccaaa cagcaagaac
      961 tattcctact acaggaatga aaaagagtag taaccaccac caaggcttgc caacaatctc
     1021 tagtaatata atggtgttgt aaataggaat taatgaggcc caaccaggtt tgccggcttt
     1081 ttcaaagatt cgccagtaaa catagaggta aaaagcaatt ataaaaataa taagtatcca
     1141 gaattctgta ccaggaccat cataaccata catgtcatta tccatagtaa taatttttaa
     1201 gtttaatttt caaaggtaga aaaatatttg agtttggagt attagcccga agtaagaaat
     1261 ccaaatcctg aatattataa aataattagc ttctgtcctc tgtcttctag tttccagttt
     1321 gtcttaaatc attttcaata tattcacttc cttctcttct agaaatctcc attttcctct
     1381 tggtaaatct tttttggtta aaccagcaaa aatcactctg tcgagtttta ccacctcgta
     1441 gtctagttgc tcaaatattc gccgtacaat tctgttctta cctgaatgta attctatacc
     1501 aacatgtctt ttgtccattt catctgccac ccaatttatt ttgtcgggcc taattaaccc
     1561 atcttcaagt tctattcctt caattatccg taacatatca tttttcgaaa ggggtttatc
     1621 cagaacaaca tgatataatt ttttaacacc atgttttggg tgagttaagc gagtggttag
     1681 ttccccgtcg ttagtgaaaa gaagcaaacc agttgtatta cgatccagtc tgcccactga
     1741 atatattctt tcagtacaag ctttttcaac caaattcata acggtacgcc tattttgagg
     1801 atcatcagaa gtagtaataa atcctttggg tttgttaagc aataaatacc gtagtttttc
     1861 gcttcttaaa gtcttattgt tatatactac tacatcaccc ggaactactt tagtgcctag
     1921 ctgagtcaca accttattgt taatagttat tttcccactt tcgataagtt tatcagcttc
     1981 tcggcgcgaa caaattcctg cgtcagcaat gtatttatta agtcttacca acaccggagt
     2041 gtctgctgct tttttctcag cagtagcttt tttagatact cttttgttcc ctttattttg
     2101 tgaaggtttt tctgaattat ttcttttagg tttcattgac tatcttagat aagcatttta
     2161 attagtaata tatgtctgca aatatcttta agattattca catagaggga atttatttga
     2221 gcgaaataaa gtttgtgcac tttctgataa ct
//
LOCUS       DASCQP010000518         2222 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001870451, whole genome shotgun sequence.
ACCESSION   DASCQP010000518 DASCQP010000000
VERSION     DASCQP010000518.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2222)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2222)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2222
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001870451"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1408
                     /locus_tag="QF480_08875"
     CDS             <1..1408
                     /locus_tag="QF480_08875"
                     /inference="COORDINATES: protein motif:HMM:NF015530.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Zn-dependent hydrolase"
                     /protein_id="HJN06715.1"
                     /translation="EAKDAFMLGINNEKDRQYALINYGPWDEMNNLAPFIKGYGDKPA
                     GAQFYPENMTVEEFDKFENPNKTSQYTLIRRNNKTRELEIVWYHEGFKEKTKAAAELL
                     LEASKLAEDPGFATYLKLRAQALLIDDYFASDIAWLDMKNNLIDFVVGPIENYTDKLF
                     GYKTAHEAYILIKDVEWSNKLTMYAKYLPQLQKELPVDAAYKMETPGSDVELNAYDVI
                     FYAGDCNMAGKTIAINLPNDEQVQLEKGTRKLQLKNTMKAKFDKILVPISDVLISENQ
                     RQNITFNAFFSNVMFHEVAHGMGIKNTINGNGSVRKALKEKNSAIEEGKADILGLFLV
                     TKLNEMGVFTETDLMDNYVTFMAGIFRSVRFGASSAHGMANMLRFNYFLEKGAFTRNE
                     DGTYSIDIDKMKAASAELTQKILTLQGDGNYEEAKSWIESEGKISPQLKADLDRINEK
                     GIPVDIYFDQGPEVVGLK"
     gene            1584..>2222
                     /locus_tag="QF480_08880"
     CDS             1584..>2222
                     /locus_tag="QF480_08880"
                     /inference="COORDINATES: protein motif:HMM:NF021942.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008239 - dipeptidyl-peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0070009 - serine-type aminopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S46 family peptidase"
                     /protein_id="HJN06716.1"
                     /translation="MKKLSYLLALIIIISGIKVKADEGMWLPIFLERLNYVDMEKMGL
                     QLTPDEIYSVNNGSLKDAITGLSNSAAPQGFFCTGEIVSNEGLMFTNHHCGFNNIQKH
                     STVDHDYLADGFWAMSRDEELPNEELTASILYRMSDVTDSIIPNISDTLMGQARTAAI
                     RKITSRMKSSAAEDGKYNVVIKSFFSGNEYYMFVYETYKDVRLVGAPPSSIGK"
BASE COUNT          795 a          336 c          438 g          653 t
ORIGIN      
        1 agaagcgaag gacgctttta tgttaggaat caacaatgaa aaagacaggc aatatgcttt
       61 aataaattac ggaccctggg atgaaatgaa taaccttgct ccatttatta aaggttatgg
      121 agataaaccg gcaggagcac aattttaccc ggagaatatg actgttgagg aatttgataa
      181 atttgagaac ccaaataaaa caagtcagta tacattaata agaagaaata acaaaaccag
      241 agagttggaa atagtatggt atcacgaagg ttttaaagaa aaaactaaag cagcggcaga
      301 gttactatta gaagcttcaa aacttgctga ggacccaggt tttgctactt acttaaaact
      361 cagagctcaa gctttactta tcgacgatta ttttgcaagc gatattgcat ggcttgatat
      421 gaaaaacaac cttattgact tcgttgttgg tcctattgag aattacaccg acaagttatt
      481 tggctataaa actgcccatg aagcatatat tctaataaaa gatgttgaat ggagtaataa
      541 gttaacaatg tatgcgaaat atcttcccca gcttcaaaaa gagctaccag ttgatgctgc
      601 atataaaatg gaaactcctg ggtctgatgt ggagctcaat gcttatgacg ttatttttta
      661 tgctggtgat tgtaatatgg ctggtaaaac cattgccatt aatctgccta acgatgagca
      721 ggtacagctt gaaaaaggaa ctcgtaagct tcagttaaaa aatactatga aagcgaagtt
      781 tgataaaata cttgtaccta tttcagatgt acttataagt gaaaaccaac gccaaaatat
      841 tactttcaac gcattcttct caaatgtaat gtttcatgag gtagcacatg gtatgggtat
      901 taagaataca ataaatggaa acggatctgt acgaaaagct ctaaaagaaa aaaattcagc
      961 aatagaagaa gggaaagctg atattctggg tttattttta gttacgaaat taaatgagat
     1021 gggtgtgttt acggaaaccg atttgatgga taactatgta acttttatgg caggtatttt
     1081 ccgctcagta agatttggag catctagtgc tcatggaatg gccaatatgc tgcgcttcaa
     1141 ttatttcctt gaaaaaggtg cttttacaag aaatgaagat ggcacatact ccattgatat
     1201 cgacaaaatg aaggctgcat ctgcagaact cacacaaaag atactaacgc ttcagggtga
     1261 tggcaattac gaagaagcaa agtcctggat tgaatccgaa ggaaaaatca gtccgcaatt
     1321 aaaggctgat cttgatcgta taaacgagaa aggaattcca gtggatatat attttgatca
     1381 aggacctgaa gtagttggct tgaaatagca taatgttgga ataataacaa ttgtacgaaa
     1441 taaagatgta catgtccatt tttgaacaat catcccacaa ataatttttg aatatttttg
     1501 taaatacata accatcaatc ctgtaacatt gatggtataa tttatgttaa attgctatgt
     1561 tttaattaat aaataaatct aaaatgaaaa aattatctta cttattagca cttataataa
     1621 ttatttccgg aataaaagtc aaagccgacg aaggtatgtg gcttcctata tttcttgaaa
     1681 gattaaatta tgtggatatg gaaaaaatgg ggttacaatt aactcctgac gaaatttata
     1741 gtgttaacaa tggtagttta aaagatgcta taaccgggtt atcaaatagt gctgcaccgc
     1801 aagggttttt ctgcaccgga gaaattgttt caaatgaagg actgatgttt acaaatcacc
     1861 attgtggatt taataatatc caaaaacata gcacagtaga tcatgattac cttgctgatg
     1921 gtttctgggc aatgagccgt gatgaagaat tgccaaacga agaacttaca gcatcaattc
     1981 tctataggat gtctgatgtt actgatagta ttataccaaa catcagtgat actcttatgg
     2041 ggcaagcacg cactgctgca attcgaaaaa ttacatcacg tatgaagagt agtgcggcag
     2101 aagatggaaa atataatgtt gttattaaga gtttcttcag tggtaatgag tactatatgt
     2161 ttgtttacga aacatataaa gatgttcgcc ttgtaggagc accaccttca tcaattggaa
     2221 ag
//
LOCUS       DASCQP010000519         4097 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001890245, whole genome shotgun sequence.
ACCESSION   DASCQP010000519 DASCQP010000000
VERSION     DASCQP010000519.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4097)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4097)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4097
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001890245"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..2112)
                     /locus_tag="QF480_08885"
     CDS             complement(<1..2112)
                     /locus_tag="QF480_08885"
                     /inference="COORDINATES: protein motif:HMM:NF012492.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CarD family transcriptional regulator"
                     /protein_id="HJN06717.1"
                     /translation="MNPSQLIKLFSQSPSIAILRKFIEDNKLHILAKGMVGSSIALAV
                     TSLFDQKGKQQHLVVLHDKEQSAYFYNDAESLLDESKSDINQKKVLFYPTSYKRPYEP
                     ETVDRAYQLSRTEVLKRTMSGDKKTIIVTYPEALAEKVITKRYLTKNLMKLKVGEDVS
                     LDFISDLLFELDFEHVDFVAEPGQFAIRGGIIDVFSFSNEHPYRIEFFGDEVESIRTF
                     DPSTQLSMQQLNRITLLPNVQSRELIENRVNFLDYIPSSTLLWFDNIELTINSIEKEF
                     EKAVTGFGKLEHSENISNPETLFTTGDFFKNRIANFSTVEFSNESFFNEFATVKFKQK
                     PQPSFNKNFELLINDLANWSSANYKCLIFSNNQKQIERLYAIFDDLQADYSENERAKF
                     TPVYQSLSNGFIDEDIGLLCYTDHQIFNRYNRFRLREGFGRKELISIKELYDLTPGDF
                     VTHIDHGVGRFDGLQIIDNNGKKQEAIRLIYKNNDILYVSIHSLHRISKYVGKDGTPP
                     ALNKLGSKSWSKLKNKTKSRVKDIARDLIKLYALRKDSKGIEYSPDTYLQNELEASFI
                     YEDTPDQLKATNDTKKDMEASFPMDRLVCGDVGFGKTEIAIRAAFKAVCESKQVAVLV
                     PTTILALQHFNTFSQRLKEFPVTVDYINRFKSTKRQKDTLLKLKEGKVDILIGTHRLL
                     SKDIDFKDLGLFIIDEEQKFGV"
     gene            2303..3565
                     /locus_tag="QF480_08890"
     CDS             2303..3565
                     /locus_tag="QF480_08890"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR00657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004072 - aspartate kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HJN06718.1"
                     /translation="MKRVMKFGGALMDSASGIERVVNLIKENSGEPLVVVVSALGKTT
                     NKLEKLHQLSVEGNDINLEFREIKEYHLGIAQDIMPQLPDETSSSLNVLFNELWDALN
                     THYVDRYEAYDSIVSFGEDLSSSLLYHYLRYHDIKVKLISAKNLIVTDSNFTDAAIDW
                     NHTSKTINSRIVPALENNEIVLTQGFIGADKTGKTTTLGREGSDFTAAILGNLLDADE
                     VTIWKNVPGLMNSDPARFTNSVKLDSLSYHEAIELAYYGASVIHPKTIQPLKQKNIPL
                     YVRPYYDSSLDATSITNDITKDGELPSIIIKDNQVLLSINTLNLSFIGEENLKHIFDA
                     FSKNKIHINLMQNSAVSFSVCFNEDVVKLEALLFDLKKEFLLKYNTGLQLITIRHYND
                     DLVDKLTRNKKVYLVQKSRITVQLLVKT"
     gene            complement(3638..>4097)
                     /locus_tag="QF480_08895"
     CDS             complement(3638..>4097)
                     /locus_tag="QF480_08895"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN06719.1"
                     /translation="TLYWGNTPFVEDLTNVVYADNDFSSDWVEALALFVPDESGNIFL
                     GFHMNSTQGYGSFLDDVKITDWGTVDVGNKLENDKVKIYGYSGNVTIEASDVWNGADI
                     MITNMLGQKIYQGRLIGKTNIPISNNSQSGLYIVSLNKSGNLITKKLFMR"
BASE COUNT         1321 a          695 c          713 g         1368 t
ORIGIN      
        1 tacaccaaat ttttgttcct catcaataat aaacaatcca aggtccttaa aatcaatatc
       61 tttgcttaac aatctgtggg tgccgattag aatatctact ttcccttcct taagtttcaa
      121 aagggtatcc ttttgccgct ttgtactttt aaagcggttt atatagtcaa ctgttacagg
      181 gaactcttta agcctttgac taaaagtatt aaaatgttgt aatgctaata ttgttgtagg
      241 aacaagaaca gctacctgtt tgctttcaca tacagcttta aatgcagcgc gaatggcgat
      301 ttcggtttta ccaaatccaa catctccaca tacaaggcga tccattggaa aggaggcctc
      361 catatctttt ttggtgtcat tggttgcttt tagctgatct ggtgtatctt cataaataaa
      421 tgaagcctca agttcatttt gaagatatgt gtcgggagaa tattcaatgc cttttgaatc
      481 ttttcgtaag gcataaagtt ttatcaaatc acgggcaata tcctttactc tacttttggt
      541 tttatttttt aatttgctcc aggatttaga ccctaactta ttaagagctg gtggagtacc
      601 atctttccca acatatttgg aaattcggtg caaagagtga atgctaacgt aaagtatatc
      661 gttgtttttg tagattaacc gaatcgcttc ctgttttttg ccgttgttgt caattatctg
      721 gaggccatca aaacgtccta caccatggtc aatatgagtt acaaaatctc caggagttag
      781 atcatagagt tctttaattg aaataagttc cttgcgtcca aatccttcac gtagccgaaa
      841 cctgttataa cgattgaata tttgatgatc agtataacat aataacccaa tatcctcatc
      901 aataaatcca ttgctcagac tttggtaaac aggagtaaac tttgctcttt cattttcgga
      961 ataatcagct tgtaaatcat caaagattgc ataaagccgt tcgatttgtt tttgattgtt
     1021 tgaaaatatc agacatttgt agttggctga tgaccaatta gctaagtcgt tgattaataa
     1081 ctcaaaattt ttattaaacg atggttgtgg cttctgttta aactttactg ttgcaaattc
     1141 attgaaaaag ctttcattag aaaactccac ggtagaaaaa ttagctattc tatttttaaa
     1201 aaaatctcct gttgtaaaaa gtgtttccgg attgctaata ttttcactat gttcaagctt
     1261 gccaaaccct gttacggctt tttcaaattc tttttcaata ctgtttatgg taagctcaat
     1321 attgtcaaac cagagaagag tagaagatgg aatataatcc aaaaagttaa ctctgttctc
     1381 aattaattct cgactttgaa catttggcag caatgtgatt cgatttaatt gttgcatcga
     1441 caactgtgta gaaggatcga acgttctgat tgattcaact tcatccccaa aaaactctat
     1501 tcgatatgga tgctcgtttg aaaatgaaaa aacatcaata ataccacctc tgattgcaaa
     1561 ctgacctggt tcagctacga aatctacatg ttcaaaatca agttcgaaaa gtaaatcact
     1621 tataaaatct aaggatacat cttcaccaac cttgagcttc ataagatttt tggtgaggta
     1681 tcttttagtt attacctttt ctgcaagtgc ttcagggtag gttacaataa tagttttttt
     1741 atcccctgac atggttcgtt ttagcacctc agttcttgaa agctggtagg cacggtctac
     1801 agtctcgggc tcgtatggcc gtttgtatga tgtaggatag aagagtactt ttttttggtt
     1861 tatatcggat tttgattcat ccagcaaact ttcagcatca ttgtaaaagt atgcagactg
     1921 ttccttatca tgtagtacaa cgaggtgttg ttgttttcct ttttgatcaa agagtgaagt
     1981 tacagctaga gcaatagatg atcccaccat cccttttgca aggatatgta gtttattatc
     2041 ctcaataaac ttccgaagaa tcgctattga aggactctga gaaaatagtt ttattaactg
     2101 ggaaggattc aattgataga ttgttgtttt attaccggcc aaagctaaat aaaatatgat
     2161 ctcgttctga cttcactttt atttgacaat ggattttgta agtttgcatt caataaaaga
     2221 gaagagttag ataatctttg taataaagta gaatttctgc gtttagatta tcagtaaatc
     2281 aatcgttaga aaaactttaa agttgaaaag agtaatgaaa tttgggggag cattaatgga
     2341 tagtgcttcc ggaattgaga gagttgtaaa ccttattaaa gaaaatagtg gtgaaccact
     2401 tgtggtagta gtttcagccc ttggtaaaac tactaataaa ctagaaaaat tacaccagct
     2461 gtccgttgaa ggaaatgata taaacctgga attccgtgag attaaagagt atcatcttgg
     2521 tattgctcag gatatcatgc cccaattacc tgacgaaaca agcagtagcc ttaatgtcct
     2581 tttcaatgaa ctttgggatg ctttgaatac acattatgtc gacaggtatg aagcatacga
     2641 tagcatagtt tcttttgggg aggatctgtc aagtagtctt ctctatcatt atttaagata
     2701 tcacgatata aaggttaagt taattagtgc taaaaatctg atagttacag atagtaattt
     2761 tacagatgct gcaatagatt ggaatcatac gtcaaaaact ataaattcga ggattgtacc
     2821 tgcgttagaa aataatgaaa tagttctaac acagggattt ataggtgctg acaagacggg
     2881 taaaacaaca acattgggta gggaagggtc ggactttact gctgctatac tgggcaatct
     2941 attagatgca gatgaagtaa cgatatggaa aaatgttccg ggattgatga attccgatcc
     3001 tgcaaggttt accaattctg ttaagctcga cagcttgtca tatcacgaag caatcgaact
     3061 tgcatattat ggtgcttctg ttattcaccc aaagactatt cagccattaa aacagaaaaa
     3121 tattcctcta tatgtgagac catattatga ttcatcactt gatgctacat ctataacaaa
     3181 tgatataacc aaagatggcg aactgccaag tattattatt aaagataatc aggtattatt
     3241 atctatcaat actcttaatt tgtcgtttat aggagaggaa aacctaaagc atatttttga
     3301 tgcttttagt aaaaataaga ttcatatcaa cttaatgcaa aattcggcgg taagcttttc
     3361 ggtctgtttt aatgaagacg tagttaaact tgaggcgtta ctttttgatt tgaaaaagga
     3421 atttcttttg aaatataata caggtttaca gctgattaca ataaggcatt ataatgatga
     3481 cctggttgat aaactcacta gaaataaaaa agtttacctg gttcaaaaaa gccggatcac
     3541 agttcaacta ttagtaaaaa cctaaatttt attacttgta acaaaaaaag ccggatggaa
     3601 aatattccac ccggcttttt agttacggaa tcatgcttta gcgcataaaa agttttttag
     3661 ttattaagtt gccacttttg tttaatgaca ctatgtaaag accggattga ctattatttg
     3721 aaatcggaat atttgttttt cctattaaac gaccctggta tattttttgt ccaagcatat
     3781 tagttatcat gatatcagca ccattccaaa catcagatgc ttcgatagtt acattaccag
     3841 aatagccata tattttcact ttgtcattct caagtttgtt accaacatca acagtacccc
     3901 aatcagtaat tttaacatca tctaaaaagc taccatagcc ttgagtactg ttcatatgga
     3961 atcctaagaa aatgtttccg ctctcatcag gaacaaacaa ggccaatgct tcaacccaat
     4021 cagaagaaaa gtcattatca gcatatacaa catttgtaag atcttcaaca aatggagtat
     4081 ttccccaata caatgtc
//
LOCUS       DASCQP010000520         3376 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001890408, whole genome shotgun sequence.
ACCESSION   DASCQP010000520 DASCQP010000000
VERSION     DASCQP010000520.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3376)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3376)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3376
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001890408"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            1..903
                     /gene="obgE"
                     /locus_tag="QF480_08900"
                     /pseudo
     CDS             1..903
                     /gene="obgE"
                     /locus_tag="QF480_08900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011109231.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
     gene            complement(991..1650)
                     /locus_tag="QF480_08905"
     CDS             complement(991..1650)
                     /locus_tag="QF480_08905"
                     /inference="COORDINATES: protein motif:HMM:NF012301.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HJN06720.1"
                     /translation="MIKVSLIDEHPVICDALTALLSDVDDVMVAGSSRSFKEFAEVIA
                     DVQPNIVITVFYKPDDINVEDIRQLAFEYPNIKLLVLSMFNDEKQVLKMIKAGAKGHL
                     SYDTNRSEILEAIYTLRNGYEFYAKTITNILLSSYISDKNLNKREKENRQKDLSVREM
                     EVFRLFAEGNSNRSIADELFISIRTVETHKTNIMKKIGLKTTVDLVKFAIKTNIIHLD
                     Y"
     gene            1800..>3376
                     /locus_tag="QF480_08910"
     CDS             1800..>3376
                     /locus_tag="QF480_08910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06721.1"
                     /translation="MKESQSYKYVNLLDVISNINRIVRQNKSIDETFLKIVDAIHVYS
                     KRSSPISLAIYYNNAEYLSREYTDDFVCMASNFITSSGNKGKIKICSKQKAKNQSSLE
                     MSENDYFLKSLVKIITQYLNDLERTAGLSNPINLDTTEKTNGPVSSRFLQRFLNKYTY
                     NRDIYHDLMPFKVKEILLISSLYDAYAIESEGRFSEHMLGQYGQLNLTTFPRITGATN
                     LSQAMELLKYKHFELIIYMVGVEKTTPLIVCEQIKKTFPFIPIFLLLNNSAETDYFKR
                     KLESITYVDMLFTWNGDANIFFSMIKLLEDKINAENDTQLGRVRIILLVEDSPTYYSR
                     YLSFLYKVVMEQTKRIIDDVSTDELYKVLRMRARPKILLATNFEEATDIIKKYRDYIT
                     CLITDVKFERKGKFDEDAGIKLLEYTQKRLRNLPTILQSSDSSYASVAKDYHSLFIHK
                     HSDTLYQDFAHFIRNYLGFGDFEFKDGKGETIAVASNMKEFESFLKKIPSESLLYHGS
                     RDNFSMWLMARGEIIAA"
BASE COUNT         1171 a          541 c          624 g         1040 t
ORIGIN      
        1 cgagaaaaat atcttccaaa gggtggacct gatggtggtg atggaggaaa aggaggtgat
       61 ataatcctac ttggcaatgc taatatgtgg actctattac atttacgatt tactcgtcac
      121 ttaagggctg agcatggtag caatggcagt aaacaaagaa gtacaggagc agatgggaaa
      181 gacatcatta ttgaagttcc actgggaacc attgctaaaa atcctgacac tgacgaactt
      241 atggctgaaa taactgaaaa cggacaacaa ttggtgttgc ttaagggtgg ccgtggtggt
      301 ttaggcaatg aacattttaa aacatcaacc aatcaggcac ccagatatgc tcaacccggt
      361 gaagaaggaa tagaacaaaa tgttgttttt gagttaaaaa tacttgccga tgttggcttg
      421 gtaggatttc cgaatgcagg taagtcaact cttctttctg tagtgtcagc tgcaaaacca
      481 gaaattgccg attatccttt tacaacatta cgtcctaatc tgggcattgt tgcttatcgc
      541 gatcaatact catttgttat ggccgacata cctgggataa ttgaaggtgc gcatgaaggt
      601 aaagggcttg gcctaaggtt tttgagacat attgaaagaa attcgatctt gctattttta
      661 gtgcctgctg acagtgaaga cataagcaat gaatacgagg tattgctaaa tgagttaaat
      721 aaatataatc cagaattact tgataaaaag agaatacttg ccataagtaa aactgatatg
      781 cttgatcagg aacttataaa agaaattaaa ccgacacttc ccgaagatgt ggagactgta
      841 tttatttctt ctgtggctaa tattggaatt gtaaagctaa aagacattat ttgggaagct
      901 ctgaagagtt agactaattg atttagtaga aaacggaaga agattatcac agaatatcta
      961 ccatagcacg tagcaatcta tacactcaac tcaataatca agatgaataa tattagtctt
     1021 tatggcaaac ttaacaagat caacagtggt tttaagacct atcttcttca taatgttagt
     1081 tttatgcgtt tctactgtac gaatactaat aaaaagttca tccgcaatgc ttctgtttga
     1141 gtttccttcg gcaaagagtc tgaaaacttc catttcccgc acggaaagat ctttttgtct
     1201 attttctttt tctcgcttgt tcaaattttt atcgcttata taactgctta agagtatgtt
     1261 agttatagtt tttgcgtaaa actcataacc atttcttaat gtgtaaatag cttcaagaat
     1321 ttcagatctg tttgtgtcat aacttagatg ccctttggcg ccagccttta tcatcttaag
     1381 cacttgtttt tcatcattaa acattgacaa cactaacagt ttaatattag gatattcaaa
     1441 tgcaagttgc ctgatatctt ctacatttat atcgtcgggt ttataaaaaa cagtgattac
     1501 aatattaggt tggacgtcgg caataacctc tgcaaattct ttaaatgatc tacttgagcc
     1561 ggcaaccata acatcatcta catcagagag taaggctgtc agcgcatcac atattacagg
     1621 gtgttcatcg ataagtgaaa ctttaatcat acagacttaa atgaagtaga ttcataaaaa
     1681 aagcgaaagt acaaaatgta atcgagagtt cttagaattg taggcccgat agttttaaat
     1741 attcctaaaa tattattctc agctagtcta tgtatatttg cgagtaaata agtatcatta
     1801 tgaaggaaag tcaatcatac aaatatgtga atctacttga tgtgattagc aacataaacc
     1861 gtatagttcg acaaaataag agtatagatg agacctttct gaaaattgtt gatgctattc
     1921 atgtgtatag caagcggtca tcaccaatat ccttagctat ttattataat aatgctgaat
     1981 atctctcaag ggaatatact gacgatttcg tatgtatggc tagtaacttt attacgagtt
     2041 caggaaataa agggaaaata aaaatctgtt ctaagcaaaa agcaaaaaac cagagtagtc
     2101 tggaaatgag tgagaatgat tatttcttaa aaagtcttgt taaaattatc acacaatatc
     2161 taaatgatct tgaacggaca gcaggattat ccaatccgat taatttagat acaacagaaa
     2221 aaactaacgg accagtcagc agcaggttcc ttcaaaggtt tttaaataaa tacacatata
     2281 atcgtgacat ttatcatgat ttaatgccct ttaaagtaaa agaaattctt ctaatctcaa
     2341 gtttatatga tgcttatgca attgaaagcg aaggaaggtt ttcagagcat atgttaggtc
     2401 aatacggtca gttaaacctt actacttttc ccaggataac tggggccact aacctgagcc
     2461 aggcaatgga attactcaaa tataaacact ttgagttaat aatttacatg gttggtgttg
     2521 agaaaaccac accacttatt gtttgtgaac aaataaagaa aacatttcct tttataccga
     2581 tatttctatt gctcaacaac agtgctgaaa cggattattt taaacgaaaa cttgaaagta
     2641 ttacctatgt tgatatgttg ttcacttgga atggtgatgc aaacattttc ttctcaatga
     2701 taaaattgtt ggaagataaa ataaatgcag aaaacgacac tcaacttgga agggttcgca
     2761 ttattctatt agttgaggac tcgcccactt attactcaag atatttatcg tttttgtata
     2821 aggtagtaat ggagcaaaca aaaagaataa tagatgacgt gagcaccgac gaattatata
     2881 aagtattaag gatgcgcgcc agaccaaaaa tactgcttgc aaccaatttc gaagaagcta
     2941 cagacattat taaaaagtat agagattata ttacatgcct gataaccgat gttaaatttg
     3001 aacgaaaagg taaatttgac gaagatgcag gaattaaatt gcttgaatac actcagaaga
     3061 gactaagaaa ccttccaact atattacaat catcagatag ctcatatgcc tcggttgcaa
     3121 aggattatca ttcattattt attcacaagc attctgatac actttatcag gattttgcac
     3181 attttataag aaattatctt ggttttggcg attttgaatt taaggatggc aaaggtgaaa
     3241 ctattgccgt agcttcaaac atgaaagaat ttgagagttt cctaaagaaa attcctagcg
     3301 aatcattatt gtatcatggt agtagggata atttctcaat gtggctaatg gctcgaggtg
     3361 aaataattgc agcaag
//
LOCUS       DASCQP010000521         2462 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001893865, whole genome shotgun sequence.
ACCESSION   DASCQP010000521 DASCQP010000000
VERSION     DASCQP010000521.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2462)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2462)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2462
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001893865"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            251..655
                     /locus_tag="QF480_08915"
     CDS             251..655
                     /locus_tag="QF480_08915"
                     /inference="COORDINATES: protein motif:HMM:NF016156.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF423 domain-containing protein"
                     /protein_id="HJN06722.1"
                     /translation="MTKRFLITVGLMGAVGVLLGSLGAHVLSGNIPQEDLDLFDVANE
                     YLMFHALALLGLAFMSRYVSRSYLNIIYYLFVIGVILFSGTIFISSLKELTGFSLGGL
                     SMLTPIGGILLIAGWIAIILSGINYKHKKRYH"
     gene            complement(701..1336)
                     /locus_tag="QF480_08920"
     CDS             complement(701..1336)
                     /locus_tag="QF480_08920"
                     /inference="COORDINATES: protein motif:HMM:NF015510.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA];
                     GO_process: GO:0044874 - lipoprotein localization to outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein carrier protein LolA"
                     /protein_id="HJN06723.1"
                     /translation="MKNILLIISLLISGVIVAQSDKEAEKLLEDVINHTSSYKNFKAN
                     LSYTMVNVDMGIDEKKSGVIYVQGDSYRIEMEGQIIISDGTTIWTYLEDSEEVMVSNV
                     EDNEESISPTQILTKYNESYKAKFGQSNKYKNSKLKEICLRPKDRKNFEQISVIVNAN
                     KLSLENFSVYDVNGNVFTYHIIDLQSDLDLPKGTFIFDYASYPDVEVIDMR"
     gene            complement(1455..>2462)
                     /locus_tag="QF480_08925"
     CDS             complement(1455..>2462)
                     /locus_tag="QF480_08925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014225820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsK/SpoIIIE domain-containing protein"
                     /protein_id="HJN06724.1"
                     /translation="GLNAIIASLLYKKHPAELKFILVDPKKVELNLYSRIERHYLAKL
                     PDSEEAIITDTRKVVRTLNSLGIEMDNRYELLKDAQVRNIKEYNTKFIARKLNPLHGH
                     RYLPYLVLVIDEFADLIMTAGKEIETPMTRLAQLARAIGIHLIIATQRPSVNIITGTI
                     KANFPARIAFRVISKIDSRTILDAGGADQLVGRGDMLFSTGSELIRLQCAFIDTPEVE
                     KVTSYIGSQRAYPDALYLPEFKDEEAELKNEYDPKERDELFEDAALIIVQTQQGSTSL
                     LQRKLKLGYNRAGRIIDQLEAAGIVGPFEGSKAREVRVNSEMALEQYLKDLNSDDGLS
                     E"
BASE COUNT          739 a          448 c          392 g          883 t
ORIGIN      
        1 atatccatta gttcagtata ttcaccaaat acctgtgtac taataccatt ggttctaaca
       61 acaatgttat tatacttatt taatctctca ataaagctct taattggagg tataaattct
      121 tcctttaatg ggtaataact aatgtcgaca gttgcattca taagaacaaa aataaaattt
      181 agaattcaaa ggtacattat tttgaattta gtattttagc aacaataaat aacctaaaca
      241 ataattcaat atgacaaaac gatttttgat aacagtaggt ttgatgggtg ctgtgggtgt
      301 gttattaggt tctttgggag cccatgtact tagtggtaat atcccacaag aagaccttga
      361 cttattcgat gttgctaatg aatatcttat gtttcacgcc ttggctttat tgggacttgc
      421 atttatgagt aggtatgttt cacggtcata tttgaatata atctattacc tttttgtaat
      481 tggagttata ttattttcag gaacaatttt tataagctcg ctgaaagaat taactgggtt
      541 ttctttggga ggacttagca tgttaacacc tatcggaggt attcttttga ttgcgggatg
      601 gattgcaatt attctttccg ggattaatta taagcataaa aaaaggtatc attaggagaa
      661 tggacttttt tcataattcc tgcctcttat tacattattc tcacctcata tcaataacct
      721 caacatcagg gtaactagca tagtcgaata tgaaagttcc ctttggaaga tcaaggtccg
      781 actgtaggtc aattatatgg taggtaaaaa cattaccgtt tacatcgtaa acagaaaagt
      841 tctccaagct tagcttatta gcattaacaa ttacactaat ttgttcgaaa tttttacgat
      901 cctttggcct tagacatatt tcctttaatt tggaattttt atatttattg ctttgtccaa
      961 attttgcttt atagctttca ttgtacttcg taagaatttg tgttggagaa atgctttctt
     1021 cattatcttc aacattactt accataactt cttccgaatc ttcaagataa gtccatattg
     1081 tagtaccatc agatataatt atctgtcctt ccatttcaat cctatagcta tcgccctgaa
     1141 catatattac accagatttt ttctcatcaa tacccatatc aacattaacc attgtatacg
     1201 acaagttggc tttaaagttt ttgtaagatg atgtgtgatt tataacatct tcgagtagtt
     1261 tttcagcttc tttatcgctc tgcgccacaa tgactcccga aatgagtaaa gaaattatca
     1321 ataatatatt tttcatgttt tttaatttaa tgtgtgaatg tttgaatgcg tcaatgctta
     1381 aactagtcca tgcttaaata cgtaaataga ttttgagtac atttatatta tcactttatc
     1441 attctatcat tttatcattc acttaaccca tcatccgaat tcaaatcctt caaatactgt
     1501 tccaaagcca tttcactatt aactctcacc tcacgagctt tgctaccttc gaaaggacca
     1561 acaatcccag cagcttccag ttgatcaata atccttccag ctctgttata tccaagttta
     1621 agcttacgtt gcagtaatga ggttgaacct tgttgagttt gcacgataat taaagcggca
     1681 tcttcaaata attcatctct ttcctttgga tcatattcat ttttcagttc agcttcttca
     1741 tctttaaact caggaaggta taacgcatct ggataggctc tttgtgaacc gatataactt
     1801 gtaacttttt ctacttcagg agtatcaata aaggcacact gtagccggat aagctcactt
     1861 cctgtggaaa atagcatatc tcccctgccc accagctgat cagcaccacc agcatctagt
     1921 atggttcgag aatcaatttt tgaaataact ctgaaagcta tccgtgcagg aaaattcgcc
     1981 ttaattgtac ctgtaattat atttactgaa ggtcgttggg ttgctattat caggtgaatg
     2041 ccaattgctc ttgccaattg agccaagcgt gtcattgggg tttctatttc ttttcctgcc
     2101 gtcattataa gatcagcaaa ttcatcaatt acgagtacaa gataaggtaa atatcgatga
     2161 ccatgtaatg ggtttaactt acgggcaata aacttcgtat tgtactcttt tatattacga
     2221 acctgagcat cctttagtag ttcataacgg ttatccatct caataccaag agagttaaga
     2281 gttcttacaa ccttacgtgt gtctgtaata attgcttctt ctgagtcagg aagttttgca
     2341 agataatgcc tttctattcg tgaataaagg ttgagttcca cctttttagg atcaacaaga
     2401 ataaacttaa gttcagctgg gtgtttctta taaagtaatg aggcaataat agcattgagt
     2461 cc
//
LOCUS       DASCQP010000522         1598 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001896299, whole genome shotgun sequence.
ACCESSION   DASCQP010000522 DASCQP010000000
VERSION     DASCQP010000522.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1598)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1598)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1598
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001896299"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1569
                     /locus_tag="QF480_08930"
     CDS             <1..1569
                     /locus_tag="QF480_08930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06725.1"
                     /translation="CIASGNPRGYYLVKPESIIKYFKVDLSNAITPDYEIKLINQSGK
                     TYQGKDRILNLEISCPNNQDIQIATGSVEYSKGFIANPSRVGKQSIWEIIPIGLIVGV
                     ILFLVIVIAMQLIIPLIKNKIFYIRFAKKYKPAENEVHKECPYCGDPLNQGDVVITKC
                     EHIVHKICWNDFDHVCPEYGQNCNMGKQEFFDRTDPFSKKNRRYYVIWVLFGLVGGLL
                     SWFIYLLLKDTETIFEFVNNIVRSIKRELKDQNKLEQFTTKVASLILIGSTMGFFLTF
                     FFSLIEDYRRKSFKVFTSIFIRGIIGAVLGFLSFLLGGIILVLLNQPNTTLYFDWIPW
                     ILFGSIIGLLMSVRTTIVWKHGLLGGIISIVFSFFILYLMAGDIDYYALLIAFMLFGG
                     GLGISIATVHLRAENYYLKIVQGKKNEETIPVHKWMSYQGGHNEVYIGRSFSCEIQMN
                     WESKNPEIAEKHAKMFINNSNMPVIMTLDQEKITVYNDRFDMHISKEYELYSGVKFKI
                     GNTVFQYFEKEKGN"
BASE COUNT          543 a          225 c          301 g          529 t
ORIGIN      
        1 tgcattgcaa gtggaaatcc caggggctat tacttagtca aacctgaaag cataattaaa
       61 tactttaaag tagacctttc taatgccatt acccctgatt atgaaatcaa gctaataaat
      121 caatccggca aaacttacca aggaaaagat agaattttaa atcttgaaat aagctgcccc
      181 aataaccaag atatccagat tgctacaggt tcggtagaat attctaaagg atttattgca
      241 aatccgtcta gagtggggaa acaatccata tgggaaatta ttcctatagg attgatagtt
      301 ggggttattc ttttcttagt gatcgtgatt gccatgcagt tgatcattcc acttattaag
      361 aataagattt tttatataag atttgcaaaa aaatataaac cggctgaaaa tgaagtgcac
      421 aaagagtgtc cctattgtgg tgacccttta aatcaagggg atgttgtaat cacaaaatgt
      481 gaacatattg tacataaaat ctgctggaac gatttcgacc atgtgtgtcc tgaatatggt
      541 caaaattgta atatgggaaa gcaagaattc ttcgatagaa ccgatccatt ctcaaaaaaa
      601 aacagaaggt actatgttat atgggtattg tttggacttg ttggcggttt gctctcctgg
      661 ttcatctacc ttttattaaa ggatacagag actatattcg agttcgtaaa taatattgtc
      721 agatcaataa aacgcgaatt aaaagatcaa aataaattag aacagtttac caccaaagta
      781 gcatcattaa tacttattgg ttcaacaatg ggattctttt taaccttttt cttttcattg
      841 attgaagact accggagaaa aagttttaaa gtttttacaa gcatctttat aagaggaata
      901 attggtgctg ttttaggttt tttatcattt ttacttggtg ggataatttt agttttatta
      961 aatcagccca atactacctt gtattttgat tggattccat ggatattatt tggctctatt
     1021 attggacttc tgatgtctgt aagaacaaca attgtctgga aacatggtct tctaggagga
     1081 ataatctcta ttgtgttcag tttcttcatt ctgtacctga tggctggtga tattgattat
     1141 tatgcattat taattgcttt tatgcttttt ggtggaggat taggaatatc tattgcgact
     1201 gtgcatttaa gagctgaaaa ttattacctg aaaattgtac aaggcaaaaa aaatgaggag
     1261 actattcctg tgcataaatg gatgagttat cagggtggtc acaatgaggt atatataggc
     1321 aggtcttttt cctgtgaaat acagatgaat tgggaatcaa agaatcctga aattgctgag
     1381 aaacacgcga agatgttcat aaacaatagc aacatgccgg ttattatgac acttgatcaa
     1441 gagaaaataa cagtttataa cgatcggttt gatatgcata tttctaaaga atacgaatta
     1501 tacagtggtg ttaaatttaa aattggcaat actgtatttc aatattttga gaaggaaaaa
     1561 ggaaattagt agcaaatcac taaaaatatt gtataatg
//
LOCUS       DASCQP010000523         2747 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001901849, whole genome shotgun sequence.
ACCESSION   DASCQP010000523 DASCQP010000000
VERSION     DASCQP010000523.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2747)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2747)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2747
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001901849"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..800
                     /locus_tag="QF480_08935"
     CDS             <1..800
                     /locus_tag="QF480_08935"
                     /inference="COORDINATES: protein motif:HMM:NF012766.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="M24B family metallopeptidase"
                     /protein_id="HJN06726.1"
                     /translation="HNYSRSAPLLAQLRLIKSKEEIALLRNACNITNKAFRRVLETTS
                     AGKFEYEIQGEIEHEFTLNSANGNGYAPIIAAGKNACVLHYIENDKECKDGDLLLLDV
                     GAEYAFYSADMSRTIPINGKFTKRQKECYNAVLSVFKKAKKLYVPGNTINKINDKVDK
                     LMEKEMLKLGLFTKEEIQKQDKEKPLYKKYFMHGTAHFLGLDVHDVGGKDEVLQPGMV
                     LTCEPGLYIREENIGIRIENDLLITKGEPIDLMKDIPIEINEIEGLM"
     gene            837..>2747
                     /locus_tag="QF480_08940"
     CDS             837..>2747
                     /locus_tag="QF480_08940"
                     /inference="COORDINATES: protein motif:HMM:NF020337.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CotH kinase family protein"
                     /protein_id="HJN06727.1"
                     /translation="MPNKKLIYFSILISLVSILFSDCVGIVGPKPGIYINEFLTSNNG
                     VVTDPLKHKEVDWIELYNSYDFPLNLSGYYLTDNTVDTTKWKFPAGTIIDANSYLIVW
                     ADGQDTLLHTNFKLSRSGEQIALYSKNKELLDQLDFNGQELNISYGRKWDGIDRWLYY
                     DEPSPNFTNNKQKGIRKINYSKKPNFSIGAGFYYISATVSLSSPTNDTEIRYTINGNV
                     PTRKSKLYSEPLQIDTTTVLRAISIEKDKLISRPETRTYFINVKKDMPVISLATDSVA
                     LWDTLSGIYENSIKGENRMANVEFFEDQNQVINQSLKMSISGNVARFHGQKAIYLEAD
                     EKYGNATLNHRFFPNKRIYSFQSILLRAGGHPDKYQTMFRDGMTQYLTKEHIEFEYIA
                     YRPVVVFINGSYWGIYNIREKLRTNYFIDNFNLDESRLDLLENSWAVANDGDNLHYLK
                     AREFIKECDKTNPLNYAHVKTLIDVDNYINYNICEIYASNIDWPNWNIKFWKKKEEGA
                     IWRWILLDLDYGFGAGTKVDYNMIGYTASPVKTRVTNPPSATVLFRKLLEFPEFKNDF
                     IQRFAASLNVIYSPERVLRIIKKFEDQRSKEMPFEIERWASSIYRSPWGKFRIPLSMT
                     EWDEEIEVMRDFA"
BASE COUNT          993 a          393 c          519 g          842 t
ORIGIN      
        1 tgcacaatta cagtaggtct gcaccattgt tggctcaatt aaggttaata aaatccaaag
       61 aggagatagc cttacttaga aatgcatgca atattacaaa caaagctttt agaagagtgc
      121 ttgaaactac atctgccggg aaatttgaat atgaaatcca gggtgagatt gaacatgagt
      181 ttacactaaa tagtgctaat ggaaatggtt atgcacctat aattgctgca ggaaaaaatg
      241 cgtgcgtact tcattatatt gagaatgata aagaatgtaa agacggtgat ttactacttc
      301 ttgatgttgg tgcagagtat gctttttatt ctgccgatat gagccgtaca atccctataa
      361 atggtaaatt cacgaaaaga caaaaagaat gttataatgc tgttctcagt gtttttaaaa
      421 aggctaaaaa gttatatgta ccaggtaata ccatcaataa aattaatgat aaagtagata
      481 agctgatgga aaaagagatg ctcaagctag gattatttac taaagaagaa attcaaaaac
      541 aagataaaga gaagcctttg tataaaaaat acttcatgca tggtactgca cactttttag
      601 gactcgatgt tcatgatgtt ggtggcaagg atgaagtact acaaccggga atggtactta
      661 cttgtgaacc tggattatat atacgtgagg aaaatattgg aattcgtatt gagaatgacc
      721 tccttattac taaaggtgag ccaatcgatt taatgaagga tattcctatt gagattaatg
      781 aaattgaggg cttgatgtga ttattaaata tatttgtaca ttatttattc ttccaaatgc
      841 ccaataagaa attaatatat ttttctattc tgatatcttt agtttctata cttttttcag
      901 attgtgtagg aatagttggt cccaaaccag gaatttacat taatgaattc ttaacgtcaa
      961 ataatggggt tgttactgat cccttgaaac acaaagaagt agattggatt gaactttata
     1021 atagttacga ttttcctcta aacttgagtg gttattactt aaccgataac actgtagata
     1081 caaccaaatg gaaatttcct gcaggaacta taatagatgc caacagctac ttaattgtat
     1141 gggcagacgg tcaggatact ttactgcata ccaattttaa attaagccga agcggcgaac
     1201 aaatagcatt atattcaaaa aataaagaac tattggatca acttgatttt aatggtcagg
     1261 aattaaatat ttcctacggc agaaaatggg atggtattga tagatggcta tactacgatg
     1321 aaccttcacc taatttcacg aataacaaac aaaagggtat tagaaagatc aattactcta
     1381 aaaaaccaaa tttctccatt ggagcaggct tttattatat ttctgcaaca gtttccttat
     1441 caagcccaac aaacgacact gagatcaggt atacaataaa tggaaatgtt ccaacaagaa
     1501 aatcaaaact ttattctgaa cctttgcaga ttgatacaac aaccgtgcta agggcaatat
     1561 ccattgaaaa agataagcta atcagtagac ctgaaacaag aacatacttt attaacgtaa
     1621 aaaaagatat gcctgttatt tctttagcta ctgattcggt agcattatgg gatacacttt
     1681 ccggtattta tgaaaatagt ataaaaggag agaacagaat ggccaatgtc gaattctttg
     1741 aggatcaaaa tcaggtaata aatcaatctt taaagatgag tataagtgga aacgtggcaa
     1801 gatttcatgg ccaaaaagct atttatttag aggctgatga aaaatatgga aatgcaactt
     1861 tgaatcaccg ttttttcccc aataaaagga tttactcgtt tcaatcaatc ttgttaaggg
     1921 caggtggtca tcctgataag tatcaaacaa tgttcagaga tggcatgaca caatacctta
     1981 caaaggagca tatagaattc gaatatatag cgtacagacc agtagttgtt ttcattaatg
     2041 gaagttattg gggtatatat aatattcgtg aaaagttgag aactaattat tttatcgata
     2101 atttcaacct tgatgaaagc cggttagatc ttcttgaaaa ttcatgggct gttgcaaatg
     2161 atggagacaa tttacattat ttaaaagcca gagaatttat taaagaatgt gataaaacaa
     2221 atcctttgaa ttatgcacat gtgaaaactc ttattgatgt tgataattac attaattata
     2281 atatttgtga aatatatgca tctaatattg attggccgaa ttggaatatt aaattctgga
     2341 agaaaaagga agaaggagca atttggagat ggatactatt agatctggat tatggatttg
     2401 gtgcaggcac aaaagtcgat tacaatatga ttgggtatac tgcatctcca gttaagacaa
     2461 gagtcacaaa cccgcctagt gcaactgttt tatttagaaa attattggag tttccagagt
     2521 ttaaaaatga tttcatacaa agatttgctg cctctcttaa tgttatttat tctccagaaa
     2581 gagtgctgag aatcataaag aaatttgaag atcaacgctc gaaagaaatg cctttcgaga
     2641 ttgaaagatg ggcatcaagt atttaccgta gcccatgggg taaatttagg attcctttgt
     2701 caatgactga atgggatgaa gaaattgagg tcatgagaga ctttgct
//
LOCUS       DASCQP010000524         2678 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001904852, whole genome shotgun sequence.
ACCESSION   DASCQP010000524 DASCQP010000000
VERSION     DASCQP010000524.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2678)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2678)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2678
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001904852"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1961
                     /gene="nifJ"
                     /locus_tag="QF480_08945"
     CDS             <1..1961
                     /gene="nifJ"
                     /locus_tag="QF480_08945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009133549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016903 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="pyruvate:ferredoxin (flavodoxin) oxidoreductase"
                     /protein_id="HJN06728.1"
                     /translation="LPDDMKKYLAENDISMYIINATKIAQKIGLGNRTNTIMQSAFFK
                     VANVIPYKAAVNEMKTAIMKTYGNKGEEIVNMNYAAVDQGGDVKKVDIPVDWKDIVIK
                     PKEENIKLPNFIKNVVDPINLQKGDALPVSTFNGREDGTFPAGTTAFEKRGIATNVPE
                     WLEENCIQCNQCAYVCPHAAIRPFLLTDKEAADAPDNTNIIQGAGPIKAFKYRIQVSV
                     LDCTGCGICVEVCPSKVKSLAMEPIGTQLDEIDRWNYMHDKVGYKEDAVPKDKSVKNS
                     QFAQPLFEFSGACAGCGETPYIKTITQLFGERMMVANATGCSSIYGGSAPSTPYCKHE
                     KSGKGPAWANSLFEDNAEFGYGMAVGVEKLRDRLAIKMTDAIANGFSDESKEAMKEWM
                     DNKDNSNLSVTASKNLIPLLEKENNPLAKEILDLEQYMIKKSQWIFGGDGWAYDIGFG
                     GLDHVLASGEDVNVLVMDTEVYSNTGGQASKATPTGSVAKFAASGKKTRKKDLGAMVM
                     TYGYVYVAQIAMGASQSQAFKAIKEAEAYPGPSLVIAYSPCIAHGIKGGMSGVMSEEK
                     FAVEAGYWHTYRYNPMLENENKNPFTLDSKEPDWEKYQQFLNNEVRYASLKKSFPEEA
                     RILFKQNEEDAKWKYRNYLRQANMDFSE"
     gene            2112..>2678
                     /locus_tag="QF480_08950"
     CDS             2112..>2678
                     /locus_tag="QF480_08950"
                     /inference="COORDINATES: protein motif:HMM:NF015709.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family acid phosphatase"
                     /protein_id="HJN06729.1"
                     /translation="MKSKINYFLIVIFLTGIMSGCNPEKNDSVKANNDYLLLSTLFQQ
                     KAAERRALSYQAFNIAKLRLDNELRKAGLTLTLAVVVDIDETVLDNSPFEAKGIIENS
                     DYPKYWDEWCALASARPLAGSVEFLNYAKSKGVVVFYITNRKINLLAVTLKNLKEKGF
                     PYADEEHVLMKTDDSNKDSRRDIVTANHH"
BASE COUNT          937 a          431 c          541 g          769 t
ORIGIN      
        1 gacttcccga tgacatgaaa aaatatcttg cagagaatga tatttcaatg tacattatca
       61 atgcaacaaa gattgctcag aaaattggtc ttggaaaccg gactaacaca attatgcaat
      121 cggctttctt taaagttgcc aatgtaatcc cttataaagc tgcagtaaat gaaatgaaga
      181 cggctatcat gaaaacttat ggcaataaag gggaagaaat tgttaatatg aactatgctg
      241 ctgttgacca aggtggggat gtgaaaaaag tcgatattcc agtcgattgg aaagatattg
      301 ttattaaacc taaagaagaa aatattaaac tccccaactt catcaaaaat gttgtggatc
      361 caattaacct tcaaaaaggc gatgccttgc cagtaagtac atttaacgga cgtgaagatg
      421 gtacattccc tgcaggaact actgcttttg aaaaacgcgg tattgctact aatgttcctg
      481 aatggttaga agaaaattgt atacaatgta accaatgtgc ttatgtatgt cctcatgctg
      541 caatacgtcc gttcttatta acagataaag aggctgcaga tgctcctgat aatacaaata
      601 taattcaagg tgcaggtcca attaaagctt ttaaatatag aattcaagta agtgtgctag
      661 actgtaccgg ttgtggtatt tgtgttgaag tttgtccatc taaagtaaaa tcactcgcta
      721 tggaaccaat tggtacacag cttgatgaaa ttgataggtg gaattatatg cacgataaag
      781 ttggttacaa agaagatgct gtaccaaaag ataaaagcgt taaaaatagc cagtttgccc
      841 aacccttatt cgaattttca ggtgcatgtg ctggttgtgg tgaaacacca tatattaaaa
      901 ctatcactca actgtttggt gagagaatga tggtagcgaa cgctactgga tgctcatcaa
      961 tttatggagg ctctgctcct tcaacaccat attgtaaaca tgagaaatca ggtaaaggac
     1021 ctgcatgggc gaattcattg tttgaagata atgctgaatt cggctacgga atggctgtag
     1081 gggttgagaa attaagagat cggcttgcta tcaaaatgac agatgccatc gctaatggat
     1141 tttcagatga gtcgaaagaa gctatgaaag aatggatgga taataaagac aattcaaact
     1201 tatcagtaac agcttccaag aatctgatcc ctttacttga aaaagaaaat aaccctcttg
     1261 caaaagagat tcttgatctt gagcaatata tgattaagaa atcgcagtgg atttttggtg
     1321 gcgacggttg ggcttacgat attggttttg gaggattaga ccatgttctt gcttctggtg
     1381 aggatgtaaa tgttcttgta atggatactg aggtttattc aaacactggt gggcaagctt
     1441 caaaagcaac tcctactggt tctgtagcca aatttgcagc ttccggtaaa aaaaccagga
     1501 aaaaagatct aggtgccatg gtgatgacat atggttatgt ttatgttgca caaattgcaa
     1561 tgggagctag ccaatcacaa gcatttaaag caattaagga agctgaagca tatccaggtc
     1621 catcactcgt tatagcttat tctccttgta ttgcacatgg aattaaagga ggtatgagtg
     1681 gagtaatgtc agaagaaaag tttgctgtgg aagcaggtta ctggcatact tacagatata
     1741 acccaatgct tgagaatgaa aataaaaatc catttacact agactccaag gagcccgatt
     1801 gggaaaaata ccagcaattc cttaacaatg aggttagata cgcttcattg aaaaaatcat
     1861 ttcctgaaga agcccgtatt ctgtttaaac agaatgaaga agatgctaaa tggaaatata
     1921 gaaattactt aagacaggcg aatatggatt tctcagaata atatttgtta acatccaaaa
     1981 agaaggatac tttgaaaaaa gtgtccttct tttttctgct taattatttc ataaaaactt
     2041 acacaacatc tttttgcaaa aactaactat tttagccaaa cataaatgcc atgctgaact
     2101 caaaaatatt catgaaaagc aaaatcaatt atttccttat tgtaattttc ctaactggaa
     2161 ttatgtctgg ttgcaatcca gaaaagaatg actctgtaaa agcaaacaat gattatcttt
     2221 tattgtcaac attatttcag caaaaagctg cagaaagaag agcattatct taccaggcat
     2281 ttaatatcgc caaattaaga cttgataacg aattgagaaa agcagggtta acattaacgc
     2341 tggcggttgt tgtagatatt gatgaaacag ttttagataa cagcccattt gaagcaaaag
     2401 gtattataga gaattctgat taccctaaat actgggatga gtggtgtgca ctagcaagtg
     2461 ccagaccact tgcaggttca gtcgaatttc tgaattatgc caaatcgaaa ggagtggttg
     2521 tattttatat aacaaatagg aaaattaatc ttctggctgt aactttaaaa aatctcaaag
     2581 aaaaaggatt cccgtatgcc gacgaagaac atgtgttaat gaaaacagac gattcaaata
     2641 aggattcgcg tagggatatt gttacggcaa atcatcat
//
LOCUS       DASCQP010000525         2820 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001905081, whole genome shotgun sequence.
ACCESSION   DASCQP010000525 DASCQP010000000
VERSION     DASCQP010000525.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2820)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2820)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2820
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001905081"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1057)
                     /locus_tag="QF480_08955"
     CDS             complement(<1..1057)
                     /locus_tag="QF480_08955"
                     /inference="COORDINATES: protein motif:HMM:NF024116.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJN06730.1"
                     /translation="MNFEYYIANHLTAGKIQSLSKPVVRISFISIALGLALMIISVAI
                     VIGFKNSVSKKVMGVASHIQLVLFDNNSSLQGEPIAITDELIKQLSGNSKIDHIQTTA
                     QKAGVIKTSNQIQGVVLKGIDSNYDSKFLVNNLIAGNYPSFADSIKTDEVLISERIAK
                     KLNLDVGNNVRMWFIDEDDIRARGRKFNVSGIYNTGVEEFDSRYIIGDLRHLQKLNNW
                     KSDEVGSIEIYLSDVNEINNTALELYRTLPYNLTAVTVYDEYPQIFNWLDLLDMNVIV
                     ILTLMILVATITMISTLLVLIIERTSMVGLLKALGSYNSSVRKIFLYKASGIILIGMF
                     WGNFIGLLFYFVQLKYRL"
     gene            1175..2368
                     /locus_tag="QF480_08960"
     CDS             1175..2368
                     /locus_tag="QF480_08960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013815463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1343 domain-containing protein"
                     /protein_id="HJN06731.1"
                     /translation="MNIKSITIIFLLFLWTSLLICQTNKIVLVEYDEINSGASQIEKY
                     LPFLLNNKIAIVANQSTLVGNTHLIDTLLSHGVNVTKIFCPEHGFRGVAEAGKKILDS
                     IDLKTKIPIISLYGSHKKPSSADLENIDLVLFDLQDVGTRFYTYISTLTYVMEACAEN
                     KIPIIVLDRPNPNGYFIDGPVLEKEHQSFIGLHPVPVVYGMTIGEYARMVAGECWINK
                     ASDIDLSVIPLVGWDRNMIVKLKMKPSPNLPNWQSVYLYSSLCFLEGTIMSIGRGTDF
                     PFQVYGHPEFMIGSFIFTPDSTQSASHPKFKGVPCYGANLRGYADNYKHNPQQINLSW
                     LIGTYETMRKDNNFFTNYFEKLAGTDELRKQIVAGLSEDEIRKSWQPKIDNFKKVRAK
                     YLLYP"
     gene            2481..>2820
                     /locus_tag="QF480_08965"
     CDS             2481..>2820
                     /locus_tag="QF480_08965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009434820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HJN06732.1"
                     /translation="MTLIKSISGIRGTIGGKPGDNLTPIDIVKFTAAFASLVKENNPK
                     KRLKFVVGRDARISGSLVESLVNSTLVGMGIDVVNTGLSTTPTVEMAVMDLVADGGII
                     ITASHNPKNWN"
BASE COUNT          948 a          487 c          472 g          913 t
ORIGIN      
        1 taagcctata ttttaactga acaaaataaa ataataatcc tataaaatta ccccaaaaca
       61 ttccaatgag gattataccc gaagctttat agagaaatat cttccgaact gagctgttat
      121 acgatccaag tgcttttaat aatccaacca tgcttgtgcg ttcaataata agaactaaca
      181 aagttgaaat catagttatg gttgccacta atatcatcaa tgtgaggata actataacat
      241 tcatatctag tagatctaac cagttgaaaa tctgagggta ctcatcataa acagtaactg
      301 ccgttaaatt ataaggtaaa gttctatata gttctaaagc agtattatta atttcattca
      361 catcacttag atatatttcg atgctaccca cttcatcact tttccaatta ttcaattttt
      421 gaagatgacg caaatcacct ataatatacc tgctatcaaa ctcttcaaca cctgtattgt
      481 aaataccact aacattgaac ttcctacctc tcgctctgat atcatcttcg tcaataaacc
      541 acattcgcac attgttgcca acatctaaat ttagtttttt tgctattctt tcagaaatta
      601 atacttcatc agtttttatc gaatcagcaa aacttgggta attacctgca atcagattgt
      661 tgacgagaaa tttgctgtca taattactgt caataccctt aagtacgacg ccttgtattt
      721 gattactggt tttaataacc ccggcttttt gagcagtagt ttgtatatga tcaattttgc
      781 tgttacctga tagttgctta atcagttcat cagtaattgc aataggttct ccctgcaacg
      841 aagaattgtt atcaaatagt actaactgaa tatgcgatgc aacgcccata acctttttac
      901 ttaccgaatt tttaaaacca ataacaatgg ctacagaaat aatcataaga gcaagtccta
      961 aagctatact tataaaggat attcttacaa ctggtttcga caggctttgt attttcccag
     1021 ctgttaggtg gttggctatg taatattcaa agttcaatga aagttgtatt tttcaaagtt
     1081 tatttcttgc aaatatacac tgtaactaat aagtgtctta agtttgaaga gcttaaaata
     1141 cctaaagttg taatttagcg tttaattatt caatatgaat ataaagtcaa tcacgattat
     1201 ttttttattg ttcctctgga cttcattatt aatttgtcag actaacaaaa tagtacttgt
     1261 agagtatgac gaaattaata gcggtgcatc acaaatagaa aaatatttac cattcttatt
     1321 gaataataag attgctattg tggctaatca atcaacattg gttggaaata cgcatcttat
     1381 tgatactctt ctttctcatg gtgttaatgt tactaagata ttttgccctg aacatggttt
     1441 taggggtgtt gctgaagctg gtaaaaaaat acttgatagc attgacctga agacaaaaat
     1501 cccaataatc tcactttatg gttctcataa gaaaccgtct tctgctgacc tagagaatat
     1561 agatttggta ctgttcgatc tgcaagatgt aggaaccaga ttctacacat atatctcaac
     1621 actgacgtat gttatggaag cttgtgcaga aaataaaatc ccgataattg tattggacag
     1681 accaaatcca aacggatact ttattgatgg acctgtactt gagaaagaac atcaatcatt
     1741 tatcggactt catcctgtgc ccgtagttta tggaatgaca attggcgaat atgcccggat
     1801 ggttgccgga gaatgctgga taaataaagc aagtgacatt gatttatcag taattccatt
     1861 agtaggctgg gatcgtaata tgattgttaa actaaaaatg aaaccttctc ccaatctccc
     1921 taattggcaa tcggtttatt tatactcatc actatgtttt cttgaaggca cgataatgag
     1981 tataggtaga ggaactgatt tcccttttca ggtttatgga catcccgagt ttatgattgg
     2041 cagttttata ttcacccccg atagcaccca aagtgcttca cacccaaaat ttaaaggagt
     2101 tccatgctat ggtgccaatc ttagaggtta cgccgataat tacaaacata atcctcaaca
     2161 aataaattta agttggttaa ttggtactta tgaaacgatg cgaaaagaca acaatttctt
     2221 tactaactat tttgagaaac ttgccgggac tgatgaatta aggaaacaaa tagttgccgg
     2281 attatcggaa gatgaaatta gaaagagctg gcagcctaaa atcgataatt ttaaaaaagt
     2341 aagagccaag tatttacttt acccttagtc ctaattttta taattttgca ataagaaaaa
     2401 gtataatatt gttaatacaa aggaaggtaa ttttctccag acaaaaacag ttagaaccac
     2461 gataaaatta aactattaaa atgacattaa taaaatccat atccgggatt agaggaacca
     2521 taggaggtaa accgggtgat aaccttactc ctattgatat cgttaagttt accgctgctt
     2581 ttgcatcgtt ggttaaagaa aacaatccta aaaaacgatt gaagtttgtt gtgggtaggg
     2641 atgcgcggat ttcaggttca ttggttgaaa gtttagtaaa ttcgacccta gtagggatgg
     2701 gaattgatgt tgtcaacacg ggcctttcaa caacaccaac tgttgaaatg gcagtaatgg
     2761 atttagttgc agacggtggc attattatta ctgcaagcca taaccctaag aattggaatg
//
LOCUS       DASCQP010000526         1791 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001905366, whole genome shotgun sequence.
ACCESSION   DASCQP010000526 DASCQP010000000
VERSION     DASCQP010000526.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1791)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1791)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1791
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001905366"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..238
                     /locus_tag="QF480_08970"
     CDS             <1..238
                     /locus_tag="QF480_08970"
                     /inference="COORDINATES: protein motif:HMM:NF013456.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003848 -
                     2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
                     diphosphokinase activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HJN06733.1"
                     /translation="RTCDINIIDYNSQILNLKYNNLDFTVPHKELASRNFVLFPLQEI
                     SPMWKHPKTKETISNLIQKLNEEDKNSILKIDKN"
     gene            251..1228
                     /locus_tag="QF480_08975"
                     /pseudo
     CDS             251..1228
                     /locus_tag="QF480_08975"
                     /inference="COORDINATES: protein motif:HMM:NF024724.3"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
     gene            1397..>1791
                     /locus_tag="QF480_08980"
     CDS             1397..>1791
                     /locus_tag="QF480_08980"
                     /inference="COORDINATES: protein motif:HMM:NF014839.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TGS domain-containing protein"
                     /protein_id="HJN06734.1"
                     /translation="MFQDNVFCFTPEGSVIKLPKDATPIDFAYAVHTQIGDTAIGCKI
                     NGKEDSLQSILHNGDMIKIITSDKISPSLHWLSSAKTGKARAAIRRYWHDKEPKKEID
                     KKYNSALWLSLPDIPGKLGEVTSLIGINKG"
BASE COUNT          745 a          239 c          297 g          510 t
ORIGIN      
        1 aaggacatgt gatattaata tcattgatta taatagccaa atattgaatc taaaatacaa
       61 caatttagat tttacggtac cacataaaga actcgcatca agaaattttg ttttatttcc
      121 tttgcaagaa atatcaccaa tgtggaaaca tcccaaaaca aaagagacta ttagtaattt
      181 aatacaaaaa cttaatgaag aagataagaa ctctatatta aagatagata aaaattgata
      241 taacaataaa atgattaacc aagaagattt aattaacaaa gtaaaggcct ataataaatt
      301 tctaaatcca gatactttat caaaggcata taattttgct gtaaaggccc atataaacca
      361 acaaagaatt tccggtgatc cttacttaac acatcctgtt gctgttgcaa atatattgac
      421 cgatctaaaa ctggatagtg caaccatagc cacaggactt ctacatgata caattgagga
      481 tactaaagct acctacaaaa ctgttaagga tgaatttggt aaagaagtgg cagatttggt
      541 ttagggggtt actaagattt ctgcgcttga agataaggca aaaaaaaatt ctaaagcgga
      601 aaattttaga aaattaatat tagcaacatc caaagatatt agggttttgc tagttaaaat
      661 tgcagataga ttacacaata tgagaactat tggagaattt aataatattg aaaaaaggaa
      721 acaaattgca agggaaacta tggaaattta tgctccatta acagacagaa tgggaatgaa
      781 tagaattaga gacgaattgg aggatatttc atttaaagta ttaaatccag aagctagaga
      841 attaataact aaaagattaa atgttaaaga agaagacaga aaagatatat ttaagaaaat
      901 ttcagaagaa tttattagtg tattaaaaga aaatggtatt aatgtaaaaa taactggaag
      961 agaaaaaaca ccattttcaa tttggaggaa aattcaaaaa aaaagaactt ctttagaaca
     1021 gatttccgac atcgttgggt ttagagtaat agtgaatagt attccagaat gttacaaaac
     1081 tttaggtatt tttcatacta ggtggcaaac aattcctggt agatttaaag attatatttc
     1141 tactccaaag ataaataatt acaaatcaat acatactgca attattggtc ctgaaagaca
     1201 acgtgtcgaa attcaaatca gaactaagta tatgcacgaa tttgcccaaa gagggatagc
     1261 atctcattgg aaatataaat cttcagaaaa gtttaattct tcagcatgga aagattatga
     1321 ctggttggtt gatttagttg aaattattga taaaggagca agcccagaac attattacga
     1381 atatacaaaa ctacaaatgt ttcaagacaa cgtattttgc tttaccccag aaggatcagt
     1441 aattaaactt cccaaagatg caactccaat tgattttgct tatgctgtac atacacaaat
     1501 tggtgacacc gctattggat gcaaaataaa tggtaaggaa gattcattac aaagcatatt
     1561 gcataatgga gatatgataa aaataattac ttctgataaa atttctccat ctctacattg
     1621 gttaagctct gcaaaaacag gaaaagctcg ggcagcaata agaagatatt ggcatgataa
     1681 agaaccaaag aaagaaattg acaaaaaata caatagtgcc ttgtggttat cattaccaga
     1741 tattccagga aaattaggag aagttacttc attaattggt attaacaaag g
//
LOCUS       DASCQP010000527         2324 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001910948, whole genome shotgun sequence.
ACCESSION   DASCQP010000527 DASCQP010000000
VERSION     DASCQP010000527.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2324)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2324)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2324
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001910948"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..541)
                     /locus_tag="QF480_08985"
     CDS             complement(<1..541)
                     /locus_tag="QF480_08985"
                     /inference="COORDINATES: protein motif:HMM:NF012264.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HJN06735.1"
                     /translation="MKILRLFMAIFIFALIFTSCKKDTVDPDPDDPYENAVMSKGGIM
                     YDKFWTPESGFDQSNQYMGTFTTLGNFFRCKQCHAWDGLGNAGSYISRAPKTTRPNVA
                     SLNLYQLGQTKTPQELFDALTATENRRSMSYDLSTYDPETNHEEGDKMPNLNEFFTDA
                     EMWNIVKFMKEGMFDVSNLY"
     gene            965..>2324
                     /locus_tag="QF480_08990"
     CDS             965..>2324
                     /locus_tag="QF480_08990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016276962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HJN06736.1"
                     /translation="MKSFISFLLAILFLSTSCQKIKNQEIYIIPQPQQVNFGTSLFSF
                     DTNTMIVFSTDENLRQQVVYFSELIDAAFGFKIEAIPAVEGKSKNSVSLVIVDDLEDL
                     GEEGYKIKIEKNNVLIEANSPKGTFYGLQSLFQLLASNTQETKQNAIEIPTLEIIDFP
                     RFKYRGMHLDVCRHMFPVEFVKKYIDLLALYKFNTFHWHLTEDQGWRIEIMKYPKLTE
                     TGSWRKETLIGHGGKKPFKYDAKPYGGFYTQEEIREIVDYASNRQITIIPEIEMPGHS
                     LAALASYPELACTSGPFEVAKRWGVFKDIYCTKDETFVFIENVLLEVMEMFPSKYMHI
                     GGDEAPKARWKECSTCQGVIEREGLKDEHELQSYFIQRIEKFLNKNGRSIIGWDEILE
                     GGLAPNATVMSWRGTEGGIAAARLDHDAIMTPGSHCYFDHYQSNPDTEPLAIGGYTTL
                     EKV"
BASE COUNT          772 a          381 c          439 g          732 t
ORIGIN      
        1 cataaaggtt ggatacatca aacattcctt ctttcataaa cttaacaatg ttccacattt
       61 ctgcatcagt gaaaaactca ttcaagttag gcattttgtc gccttcttcg tgatttgttt
      121 cagggtcata agttgataaa tcatatgaca tagatcttct gttttcagta gctgtcaaag
      181 catcaaataa ctcctgcgga gttttcgttt ggcctagttg atacaggttt aatgatgcaa
      241 catttgggcg ggtcgttttt ggtgccctgc tgatgtaaga tccagcattg cctaatccat
      301 cccatgcatg acattgcttg catcggaaaa aattacccaa tgtggtaaag gttcccatgt
      361 attggttact ttgatcaaaa cctgactcgg gagtccaaaa cttgtcatac attatacctc
      421 cctttgacat aaccgcgttt tcgtacggat catccggatc aggatcaaca gtatcctttt
      481 tacaacttgt aaagatcaat gcaaaaataa atatcgccat aaataatctt aaaattttca
      541 taatagtaga tttagtttaa attattaagt attatttttt tgtaattatc tgtatcaaaa
      601 ggaatattgc tttattattt tttgtaaaca taattattgt tgaataaaag cgcaataccg
      661 tagaatacgg aaatatgtat taattataaa aaataccata aactacgtag gcgaaatatc
      721 ggccaatact tagtaattaa ataccatgag atacttacaa aaggtaatga ttaatttgta
      781 ggtcttgtgt aaacctgtaa gtattacttc accaattatt aaatcgtctc atctggccat
      841 gttagcaaac tatgaagcag agatttgtta cataaagttg gtataataat cacgtcagtt
      901 caaaattttt aactttgttt gcatagttca aagaaaaatt gaataccaac tgaattaaaa
      961 caaaatgaaa tcatttattt cctttttact ggcaatttta tttctttcca catcatgcca
     1021 aaagattaag aatcaagaga tatacataat cccccagcct cagcaagtta attttggaac
     1081 atctcttttt agttttgata ctaacaccat gatagttttc agtacagatg agaacctcag
     1141 gcaacaagtt gtttactttt cggaattgat tgatgctgct tttggattta aaatagaagc
     1201 aatacctgct gttgagggaa aaagtaaaaa ttcagtaagc ttggtgatag ttgatgactt
     1261 agaagatttg ggagaggagg gatataagat aaaaattgaa aagaataatg tattgataga
     1321 ggcaaattct cccaaaggaa ctttttatgg cttacagtct ttgtttcaat tactggcatc
     1381 aaatacgcaa gaaacaaagc aaaacgcaat tgaaatccct actttagaaa ttattgactt
     1441 tccacgtttc aaataccgag gcatgcacct tgatgtgtgt cgacatatgt tccctgttga
     1501 gttcgtaaaa aaatatattg acttgctcgc gttatataaa tttaacactt ttcattggca
     1561 tctaactgaa gatcagggtt ggcgaattga gataatgaaa taccctaagc ttaccgaaac
     1621 cggttcatgg cgcaaggaaa ccttaatcgg acatggaggc aagaaacctt ttaaatatga
     1681 tgccaaacct tatggtggtt tctatacaca ggaagaaatt cgtgagatag ttgattatgc
     1741 ttcaaacaga caaattacaa ttattccgga aattgaaatg cccggtcatt cacttgcagc
     1801 tttagcctct tatccagaac tagcttgtac gtctggacca tttgaggtgg caaagcgatg
     1861 gggtgttttt aaagacatat attgcacaaa agatgaaact tttgtgttca ttgaaaatgt
     1921 gttattggaa gttatggaaa tgtttccatc aaaatatatg catattggtg gtgatgaagc
     1981 tccaaaagcc aggtggaaag aatgtagtac ttgtcaggga gttattgaaa gagaagggct
     2041 gaaagatgag catgaattac aaagttattt tatccagagg atagaaaagt tcctaaataa
     2101 aaatggccgt agtatcattg ggtgggacga aatacttgaa ggaggtcttg ctccaaatgc
     2161 aacagtaatg tcgtggcggg ggactgaagg tggaattgct gctgccaggc tggatcatga
     2221 cgcaattatg acacccggtt ctcattgcta ttttgatcat tatcaaagta accctgatac
     2281 agaaccactt gcaattggtg ggtatacaac actagaaaag gtat
//
LOCUS       DASCQP010000528         2869 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001911016, whole genome shotgun sequence.
ACCESSION   DASCQP010000528 DASCQP010000000
VERSION     DASCQP010000528.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2869)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2869)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2869
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001911016"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            101..910
                     /locus_tag="QF480_08995"
     CDS             101..910
                     /locus_tag="QF480_08995"
                     /inference="COORDINATES: protein motif:HMM:NF013247.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class IV"
                     /protein_id="HJN06737.1"
                     /translation="MNNKLVSCKAFNADQLNKGIVIYEVIRIINRTPLFYQEHVERFY
                     NSVKNSGFIINLSAESIALRIKSLIETNKLEDVNIRFQISFTRDNKATFSAWACPFFY
                     PKNEFYESGASLSTIVAHRDNPNVKIYNRKLINNVFSRIGKDNIYEVLLLNKDGFITE
                     GSRSNIFFVDGNRIITPPLSSVLPGITRLNVIKIASKLEIDCNEVDINYNSLQLFDGA
                     FITGTSPKVLPIGKIDGVIFNPDHPTISVLMKSYNEIVVRYIDSFSWSHYV"
     gene            1003..1875
                     /locus_tag="QF480_09000"
     CDS             1003..1875
                     /locus_tag="QF480_09000"
                     /inference="COORDINATES: protein motif:HMM:NF012415.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HJN06738.1"
                     /translation="MFRYSRLLNYFRIPQTLMLILAMPFVTLGQKTLPNDFCIDRIES
                     TLFENINLLRVDYGKPELQQSASLCYVAEQHVNDLQSNNPDTSVCNLSSWSDKGDWTP
                     CCYTKYLHNPNCMWDKPKELTPYTYRGYELVTFIEEDFNADSIINLWSDSKETLDMIL
                     TRDNFANKKWICAGIGISENYISLWFGQRKDQLRVPDICDDGNDSNIIIPTMASRSTS
                     NTYYLIFGSHANMHDAREACRRLKNNEFKNCDILVKNDKYRVYLNKFNSLQEVMYAKQ
                     QLPFTYREAWILKD"
     gene            1918..2412
                     /locus_tag="QF480_09005"
     CDS             1918..2412
                     /locus_tag="QF480_09005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06739.1"
                     /translation="MESTVIYITIIIIVILVITVYNYRKKQVRYYLLSLQRYPELTLS
                     ISIQKQKGKISAVFIKLSAIKEVELKDLKIELITAKREFNNYSLQSLLESNPFPVKLE
                     ENTKTKFLVRFEDFRTLLMDGEHPFRTFRFVVVSDKGQTYKSHEMGFDKKWVIYRPDS
                     GKYN"
     gene            complement(2460..>2869)
                     /locus_tag="QF480_09010"
     CDS             complement(2460..>2869)
                     /locus_tag="QF480_09010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HJN06740.1"
                     /translation="LGVEPGEISKIASGGELSRLMLAIKSLINKKQMLPTVIFDEIDA
                     GVSGEIAGKVGSIIKKMAKKHQVISITHLPQIASKSDHHYKVHKSIVNNSTFTTISKL
                     NNEGRVEELAKILSNERVTATALDVARELMDEK"
BASE COUNT         1006 a          500 c          465 g          898 t
ORIGIN      
        1 ctcgaaactc aaaacccaaa acccgaaaca cgaaacctga aacccgcaac tcaaaacccg
       61 aaacatgatc ccaacaacct gtttatctgc aaatttcatt atgaataaca agcttgtaag
      121 ttgtaaagct tttaacgctg atcaactgaa taaaggaata gttatatatg aagttatacg
      181 gatcattaat agaacgccac tattttatca ggagcatgtt gaaagattct ataattcggt
      241 aaaaaactcc ggatttataa ttaatttatc tgctgaaagt attgctctgc gaatcaaatc
      301 actaatagaa actaataaac ttgaggatgt caacataagg ttccaaatta gctttacaag
      361 agataataag gcaacattct ctgcatgggc atgtccgttt ttttatccta aaaatgagtt
      421 ttacgaatca ggagcttccc tttcaacgat tgttgcacat agagataatc caaacgttaa
      481 aatctacaac cgcaaattga taaataatgt attctcgcgt atcggcaaag acaatatcta
      541 tgaggtattg ttattaaaca aggatggatt tatcacagaa ggaagtcgtt caaacatatt
      601 ttttgtagat ggtaatagaa taatcactcc tcccctttca tcagtactac ccggaattac
      661 cagattaaat gttattaaaa ttgctagtaa gttagagatt gactgtaatg aagtagatat
      721 caattataat tcgttgcaat tatttgatgg tgcgtttatt actggcactt cgccaaaagt
      781 attacctatt ggaaaaattg atggagttat ttttaatcct gatcacccaa ctatatccgt
      841 tttaatgaag agttataatg aaattgttgt cagatatatt gatagttttt catggtcaca
      901 ttatgtctga tccaataata ttaacaatca cactaatatt ctatacgtaa tataccaatc
      961 atttttttgt aattttacct ctaataaatt atcattaaag cgatgtttag atatagcaga
     1021 ttattaaact acttcaggat acctcaaaca ttaatgctga ttctggcaat gccttttgta
     1081 acattaggtc aaaaaacttt accgaatgat ttttgtattg acaggattga atcgacccta
     1141 ttcgaaaaca tcaatcttct ccgcgtggat tatggtaagc ctgagcttca gcaatctgcc
     1201 tcgctttgtt atgttgctga acaacacgta aacgatcttc aaagcaacaa tcctgatacc
     1261 agtgtctgca atctttcaag ctggtctgat aaaggagact ggacaccatg ttgttatacc
     1321 aaataccttc ataatcccaa ctgtatgtgg gataagccta aagaactgac accatatact
     1381 tatcgtggct atgaattagt cacatttata gaggaagatt ttaatgctga ctcgattatt
     1441 aatctttggt cggattcaaa agaaacatta gatatgatat taaccaggga taatttcgct
     1501 aataagaaat ggatttgtgc aggaatcgga ataagcgaaa attatatttc attatggttc
     1561 ggtcaaagaa aagaccaact tagagtccct gatatttgcg atgatggaaa tgatagcaat
     1621 ataattattc cgaccatggc ttcaagaagt acatcaaata cttattactt aatatttgga
     1681 agccatgcaa atatgcacga tgcaagggaa gcatgtagaa gacttaaaaa taatgaattt
     1741 aagaactgtg acattcttgt aaagaatgac aaatacagag tttatttaaa caaattcaat
     1801 agcctgcaag aagtaatgta tgcaaaacaa caactccctt ttacttatag agaagcatgg
     1861 atccttaagg attaaatcca cataaaatat cattcttaaa tattatcttt gcttaatatg
     1921 gaaagcacag taatttacat aactataatt ataattgtga tattggtaat tactgtctat
     1981 aattacagga aaaaacaagt aagatattat ttactatcac ttcaacgata cccggaactt
     2041 acattaagca ttagtattca aaaacaaaaa ggcaagataa gtgcagtatt tattaagtta
     2101 tctgcaataa aagaagtaga gttgaaggat ctcaaaatcg aattgataac cgccaaaaga
     2161 gagtttaaca attactcctt gcaatcatta ttagaatcaa atccattccc agttaaacta
     2221 gaagagaaca caaaaacaaa gtttcttgtt cgctttgagg atttccgtac actactaatg
     2281 gacggagagc atccgtttcg tacatttcgt tttgtagttg tatcagataa gggccaaact
     2341 tacaaatcac atgaaatggg gtttgacaaa aaatgggtca tttacaggcc tgattcaggt
     2401 aaatacaatt aaggaaatga ttttcatact cgatgaatgc gaataagggg tgcaatacat
     2461 tacttctcat ccatcaattc cctggctaca tccaaagcag ttgcggtaac cctttcgtta
     2521 cttaaaattt tggccagctc ctctacccta ccttcattat tgagtttgct aattgtagta
     2581 aaagttgagt tatttactat tgatttatgt actttataat gatgatcaga cttagatgcg
     2641 atttgcggca agtgtgtaat ggaaataacc tgatgttttt ttgccatttt cttgattata
     2701 ctacccacct tcccagcaat ctcaccagaa acacccgcat caatctcatc gaaaataaca
     2761 gtagggagca tttgcttttt attaatcagc gatttaatgg ctagcataag tcttgaaagt
     2821 tcaccccccg atgcaatttt actaatttcg ccaggttcaa ctccgagat
//
LOCUS       DASCQP010000529         1682 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001916252, whole genome shotgun sequence.
ACCESSION   DASCQP010000529 DASCQP010000000
VERSION     DASCQP010000529.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1682)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1682)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1682
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001916252"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(61..516)
                     /locus_tag="QF480_09015"
     CDS             complement(61..516)
                     /locus_tag="QF480_09015"
                     /inference="COORDINATES: protein motif:HMM:NF017689.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06741.1"
                     /translation="MSTTFVIKKGLDIKLLGCAEKTVVDLNAERFAIKPPNFLGCFPK
                     VLVKEGDYVKAGTPLFYDKYRDNIVFTAPVSGKVEALKRGAKRRLLEIIIDSDGKNEA
                     IDFGSSNINNLKKEDVVDKMLKSGVWPIMRQRPYSVIANPNDAPYWDAI"
     gene            825..>1682
                     /locus_tag="QF480_09020"
     CDS             825..>1682
                     /locus_tag="QF480_09020"
                     /inference="COORDINATES: protein motif:HMM:NF028426.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5103 domain-containing protein"
                     /protein_id="HJN06742.1"
                     /translation="MIKDLIIVTICFLIAPANLIAEFVENKDLVYDDNIHTTLLHPPG
                     DQLAPAVIRLNSTDKLQLSFDDMSAESYLFKYKFVHCTEDWQTSDLDVMDYIDGFFEE
                     DINNYEFSLNAIPPYIHYNLIFPTREMQIKLSGNYILKVYIDRPDDDNVILTKRFLVV
                     EPLVRIDVSIPYYPKNLEFVRKKQQINLTLITPDLFNAEPEQRIRVTIQQNGRWDNAK
                     ENLKPTSIMLNRLDFNYREGIVFEGGNQFRNFDMKSYWYQSMYIKEIISNPDGYDVIL
                     HTDHPRANKP"
BASE COUNT          570 a          290 c          256 g          566 t
ORIGIN      
        1 accaagcctt tttataaccc agagcggaaa aagatcacac cagccgaact ttactaacct
       61 tcatatagca tcccaatatg gcgcatcatt tggatttgcg ataacagagt atggacgttg
      121 tcgcattatc ggccaaacac cacttttaag cattttatca acgacatcct cttttttcag
      181 attgttaata tttgaagatc cgaagtcaat agcttcattt tttccgtcag aatcaataat
      241 tatctcaagc aaacgccttt tagctccgcg cttaagtgct tcaaccttac cactaaccgg
      301 ggcagtaaaa acaatattat ccctatattt atcataaaat agaggagttc ctgcctttac
      361 ataatcacct tccttaacca aaactttagg gaaacatcct aagaaatttg gtggtttaat
      421 ggcaaatctt tcagcattta agtcaacgac agtcttttca gcgcacccta acaactttat
      481 atccagacct tttttaatta caaaagtagt tgacatatat gtaaatattc atgtattaat
      541 tggagcgcaa tttagacatt tatgttttta cctagaatga aaattagatt tataatgaaa
      601 tttttaacga ctctaaataa gctaacttat tagatgtcag taattcagtc atatacagca
      661 gatattagct gatttattgt ctaaatacta ctgcttataa tcttgtttca tacacttatt
      721 aataatcagt ttgtatttga agattcatta aatcatttgt caaataaatt gttagatttg
      781 aaaaacttaa ttttcctgat gcttatcagc aaaaaatata tattatgatt aaagatctaa
      841 ttattgtaac catttgcttt ctaatcgctc cagcaaactt aattgctgaa tttgttgaga
      901 ataaagattt agtttatgat gacaatattc atactacttt attgcatcct cctggtgatc
      961 agctagctcc tgctgtaatt agattaaatt caacagacaa attacagcta tcgtttgatg
     1021 acatgagtgc tgaatcgtat ctttttaaat acaagtttgt gcattgtact gaagattggc
     1081 aaacttcaga tcttgatgtt atggactata ttgatggttt ttttgaggaa gatattaata
     1141 actatgagtt ttctttaaat gcaattccac catacattca ttacaatttg atatttccta
     1201 cccgcgaaat gcaaatcaaa ttatcaggaa attatatctt aaaagtatat attgataggc
     1261 cagatgatga caatgtaata ctaacaaaaa ggtttcttgt tgttgagcct cttgtgcgga
     1321 tagatgttag tataccatac tatcccaaaa atcttgagtt tgttaggaag aaacaacaaa
     1381 tcaatcttac tcttattact cccgacttat tcaatgctga acctgagcaa cgaataagag
     1441 ttactataca gcaaaatggc cgatgggaca acgctaagga gaatctaaaa ccaacttcaa
     1501 ttatgcttaa ccgattggat tttaattacc gtgagggaat tgtatttgaa ggaggaaatc
     1561 aattcaggaa tttcgatatg aaaagttatt ggtatcagtc gatgtatatt aaagagataa
     1621 ttagtaatcc tgatggttac gatgttatat tacacacaga ccatcccagg gcaaataagc
     1681 ca
//
LOCUS       DASCQP010000530         4023 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001919128, whole genome shotgun sequence.
ACCESSION   DASCQP010000530 DASCQP010000000
VERSION     DASCQP010000530.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4023)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4023)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4023
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001919128"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..535)
                     /locus_tag="QF480_09025"
     CDS             complement(<1..535)
                     /locus_tag="QF480_09025"
                     /inference="COORDINATES: protein motif:HMM:NF012422.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /protein_id="HJN06743.1"
                     /translation="MSKTKKVIVVSNAFLLSSGIENLTLELRSMLVDHVYNGSEKNLY
                     EKLISNKPEFIIIDPESVSEILIPLLRKLNEEKDIKVIGLVSSNTNDNINSRFKFTLN
                     TQDNKYKLIEALQQIVGKDDDDKTDNEQLISKREIEILRNLTLGLTNQEIADKLFLSV
                     HTVMTHRKKITRKLGIKS"
     gene            complement(544..1269)
                     /locus_tag="QF480_09030"
     CDS             complement(544..1269)
                     /locus_tag="QF480_09030"
                     /inference="COORDINATES: protein motif:HMM:NF013936.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043169 - cation binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HJN06744.1"
                     /translation="MLLEKDMKLADVIHHDYNLIPVISRFGIMLGFGDASIENICEKN
                     QINTDFFLIILNAFHDPQYLDNNYLQSFSVKLLIDYLKKTHDYYLLNKIPEIEGLISE
                     MASESEVDKESHKLLEKFFEEYKYELIKHIEKEENRVYPYVLDLESAVTDKTVSPTLI
                     SRIKEYSITSFEDEHDNVEEKLMDLKNIIIKYLPASKNQHSLYKLLKELTVLEKDLGD
                     HARIEDLVLVPKVQILEKIITDN"
     gene            complement(1318..1719)
                     /locus_tag="QF480_09035"
     CDS             complement(1318..1719)
                     /locus_tag="QF480_09035"
                     /inference="COORDINATES: protein motif:HMM:NF016211.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF454 family protein"
                     /protein_id="HJN06745.1"
                     /translation="MESQNKRSIFSNIPKPVWNILGSVFVGVGIIGIIVPLLPTTPFL
                     LLAGLCFNQGSEKMRNWFKNNKLVGSYISNYYEKKGVSVRSKIIAIIILWITIGISIH
                     FIPNIYIRIILAMILVGVTIYLISLPTLKDK"
     gene            complement(1791..2873)
                     /locus_tag="QF480_09040"
     CDS             complement(1791..2873)
                     /locus_tag="QF480_09040"
                     /inference="COORDINATES: protein motif:HMM:NF016027.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016758 - hexosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HJN06746.1"
                     /translation="MEPRKNILVCPLDWGLGHATRMVPVIEMLERKGANVIIAADNRP
                     LEFLVQRFPQNTTIQLPGYSPNYPSNNNMALAMLTSLPSMILEARQANRRLQTIINEH
                     NIDAVISDNRYELSTSKVPTVFITHQLNIQTSGWHKIGKPIINCTINHYLNKFNEVWV
                     PDIPGKFRLSGNLSKSNKFASKLFNIGLLSRFSKPEVTHKSNSIDILIILSGPEPQRT
                     ILEKLLLSQALKTELKTVILLGKPEEQVSNENKNVKLISHITDDEFSLLIQSAKIVIS
                     RPGYSTLMDLAVFGKKAIFIPTPGQTEQEYLANRLLDEGIAFSQSQSNFDLPTALKNE
                     KLYKGLFLENKPELLELRIDKLLNIC"
     gene            3034..>4023
                     /gene="dprA"
                     /locus_tag="QF480_09045"
     CDS             3034..>4023
                     /gene="dprA"
                     /locus_tag="QF480_09045"
                     /inference="COORDINATES: protein motif:HMM:TIGR00732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009294 - DNA-mediated transformation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-processing protein DprA"
                     /protein_id="HJN06747.1"
                     /translation="MPNDLLKYQISLTLIPGIGDIVGKKLIAYCGGVEAVFKENKNAL
                     MKIPGIGSSTVNSIISQKVLHKAESEISFIEKNNIKALFYTDPDYPARLLNCEDGPLL
                     LYYKGNADLNVPRVIGFVGTRKATNEGKVNCERMIKGLSSKGVLVVSGLAYGIDSYSH
                     KAALDDGLQTVAVLGHGLDRIYPSQNKKLAAKMIDNGGLLTEFLTKTNPDRENFPKRN
                     RIVAGMCDAILVVESGIRGGAMITAGLANSYNRDVFAVPGRVNDEYSKGCNMLIKSTR
                     AALAETEKDIAYIMGWDDIKVDVKEQRDLFLQLTQTQKLVYDIIEETKEISIDK"
BASE COUNT         1283 a          615 c          719 g         1406 t
ORIGIN      
        1 gagatttgat gccaagcttt ctggtgattt ttttcctatg agtcattact gtatgcacac
       61 ttaaaaaaag tttgtcggca atctcctggt tagtaagtcc caaagttaaa tttcgcaaaa
      121 tctcaatttc tcgtttacta attaattgtt cattgtcggt tttatcatca tcatctttgc
      181 caacaatttg ttgtaaggcc tcaattaact tgtatttatt gtcctgagtg tttaacgtaa
      241 atttaaaccg gctatttatg ttatcgtttg tattggacga aacaaggcct ataaccttaa
      301 tgtctttttc ttcatttagc ttacgtaaca atgggattaa tatttcagag acagactctg
      361 ggtcaattat tataaactca ggcttattac taattaattt ttcatacaga tttttttcag
      421 aaccattata cacatgatca actaacatgc tccttaattc aagagttaag ttttcaattc
      481 ccgatgaaag aaggaaagca tttgaaacga ctattacctt ttttgtttta ctcatcccaa
      541 atgctaatta tcagtaataa ttttttcaag tatttgtacc ttaggtacta gaactagatc
      601 ctcaatacga gcatgatcac ctaaatcttt ctccagcaca gttaattctt tcaataactt
      661 gtagaggcta tgttgatttt ttgatgcagg taaatattta attataatgt ttttcaagtc
      721 catgagcttt tcctcaacat tatcatgctc atcttcaaat gaagtaattg agtattcttt
      781 gattcgagaa attaaagttg gtgaaacagt tttatcagtc acagcagatt caaggtccag
      841 aacgtaggga tatacacgat tttcctcttt ttcgatatgt ttaatgagtt cgtatttata
      901 ttcttcgaag aacttctcta ataatttatg tgattctttg tcaacctctg attcagatgc
      961 catctcactg attaaacctt ctatttcagg gattttattt agcaaatagt aatcatgtgt
     1021 ttttttaaga taatcgatca gcagcttaac agaaaaactt tgtaaataat tattatccaa
     1081 atactgtgga tcgtgaaatg cattaagaat tattaaaaag aaatcagtat taatttgatt
     1141 cttttcgcaa atattttcaa tactggcatc accaaaccca agcataatac caaaacgact
     1201 aattacaggt atcaggttgt aatcgtgatg gattacgtca gcaagtttca tgtctttttc
     1261 aagtagcata tttcacaata tttatggcaa aagtaggtaa aatgtaatat gaagcggtta
     1321 cttgtcttta agcgtaggta aactgattaa gtaaattgtt acacctacta aaatcatggc
     1381 aagtattatt ctaatatata tattcggaat aaaatgaatg gatatgccaa tagtgatcca
     1441 aagaataatt atcgcaataa tttttgatct tacagataca cctttctttt catagtaatt
     1501 actaatgtag gagccaacaa gtttgttatt tttaaaccag ttacgcatct tttccgaacc
     1561 ttggttaaag cataaacctg caagtagcag gaatggtgtg gttggcaata gtgggactat
     1621 tattccgatt atccctacac caacgaaaac gctgccaagt atattccaaa caggtttagg
     1681 gatgttcgag aaaatgcttc ttttattttg agattccaaa ttgatagttg ctaaaatcga
     1741 attgcaaaaa tagattaaat ggcatgttaa attatagatt agtggttttg ttagcagata
     1801 tttaacaact tgtctattcg caactcaagt aattcaggtt tattttcaag aaataagccc
     1861 ttatacagct tttcattttt tagtgcagtg ggcaaatcaa aattgctttg actttgtgaa
     1921 aatgcaattc cttcatcaag taatctatta gctaagtatt cctgttcagt ttgtccgggt
     1981 gttggaataa aaatagcttt tttgccaaaa actgctaaat ccataagtgt tgaataacca
     2041 ggtctgctaa tcacaatttt tgcggattga ataagtaatg aaaattcgtc atcagtaatg
     2101 tgtgaaatta atttcacatt tttgttttca ttacttactt gttcttcagg tttaccgaga
     2161 aggataactg tttttaattc ggtttttaat gcttgtgaaa gtagtagttt ttctaagatt
     2221 gttctttgag gctccggtcc ggacaggata atcagaatgt cgatactgtt acttttgtga
     2281 gtaacttctg gttttgagaa tctactaagc aagccaatat taaaaagttt agaagcaaat
     2341 ttattcgatt tagaaagatt tcctgataag cgaaatttac ctggtatgtc tggtacccaa
     2401 acttcattaa acttgtttag ataatgatta attgtacaat tgataatagg tttgccgatt
     2461 ttatgccatc cgctagtttg aatgtttagt tggtgtgtta taaatactgt tggaactttc
     2521 gaagttgata gttcataacg gttatccgat attacagcat ctatattatg ttcattaata
     2581 attgtttgaa gtctcctatt tgcttgtctt gcttctaaga tcatgcttgg aagagacgta
     2641 agcatggcca aagccatatt attattagag gggtaatttg ggctgtaccc tggaagttga
     2701 atagtggtat tttgagggaa acgctgtact aaaaattcca aaggacggtt gtctgcagca
     2761 ataataacat ttgcaccttt tctttcaagc atttcaataa caggaaccat gcgagttgca
     2821 tgaccaagtc cccaatctaa tggacaaact agaatatttt ttcttggttc catgtttaat
     2881 ttcaaatatt gaacagcgtt ggaaaatatt actatttgta atgcgaaaat accaatttta
     2941 ctctaaaata ttttatctca gggtaagata atattgttga ttgatggagc tattaataat
     3001 gaaaccaatc gcattttttt ctatttttga gctgtgccta atgacctgct taaatatcaa
     3061 atttcgttaa ctttaattcc tggaataggt gatattgttg gaaaaaaact gatagcatat
     3121 tgcggtggag ttgaagctgt ttttaaagaa aacaaaaatg cgctaatgaa aattcctgga
     3181 attggcagtt ccacagtaaa cagtattatt agtcagaagg tactccacaa agcggaatcc
     3241 gagattagtt tcattgagaa gaataacata aaagcacttt tttacactga ccctgattac
     3301 cctgcaagac ttttgaattg cgaagatggg cctttattac tttattataa aggtaatgct
     3361 gatctgaatg ttccccgtgt aattggtttt gttgggacaa ggaaggctac aaatgaaggc
     3421 aaagtaaact gcgaacgcat gattaaaggg ctcagttcta aaggcgtttt agtggttagt
     3481 ggtttggcat atggtattga tagttattct cataaagcag cattggatga tggcttacaa
     3541 actgtagctg ttctaggcca tggattagac cggatatatc cgtcacaaaa caaaaaatta
     3601 gccgcaaaaa tgatcgataa tggtgggttg ttaaccgaat ttttgactaa aactaatccc
     3661 gatcgtgaaa actttccaaa gcgtaataga atagttgcag gtatgtgtga tgcaatttta
     3721 gttgtagagt ctggtattag gggaggtgct atgataactg ccggattggc aaactcatat
     3781 aatcgcgatg tttttgctgt tcctggtcgt gttaatgatg aatactctaa gggttgtaat
     3841 atgcttataa aatcaaccag agctgcatta gcagaaacgg aaaaagatat tgcctatatt
     3901 atgggttggg atgatataaa agttgatgtt aaagagcaaa gagatctatt tcttcagctt
     3961 acacaaacac aaaaattggt ttatgacata attgaagaga ctaaagaaat tagtattgac
     4021 aag
//
LOCUS       DASCQP010000531         2248 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001926624, whole genome shotgun sequence.
ACCESSION   DASCQP010000531 DASCQP010000000
VERSION     DASCQP010000531.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2248)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2248)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2248
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001926624"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..392)
                     /locus_tag="QF480_09050"
     CDS             complement(<1..392)
                     /locus_tag="QF480_09050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06748.1"
                     /translation="MSSSSSKYHSEKDRKKKQSFFRFRSDRLIFIICIFIASLFWLLI
                     KLSDDYTVNYSFKVSYNNIPAELRLTKVVDSSLNLNLTARGFTILKMNLFDDMDILDI
                     NLDNYSIEHKNGIKYAINTNELTQRFAD"
     gene            complement(452..769)
                     /gene="yajC"
                     /locus_tag="QF480_09055"
     CDS             complement(452..769)
                     /gene="yajC"
                     /locus_tag="QF480_09055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018338386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HJN06749.1"
                     /translation="MDMLFLLLQETESSDGGWMSMLPLFLILIVFYFFFIRPQTKKNK
                     DQKKFREALKKGDKVVTIGGVHGKVAEIKETTVVIDVAAQVRLVVEKSAIVMDKTEVG
                     QKK"
     gene            complement(791..1252)
                     /locus_tag="QF480_09060"
     CDS             complement(791..1252)
                     /locus_tag="QF480_09060"
                     /inference="COORDINATES: protein motif:HMM:NF019242.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1573 domain-containing protein"
                     /protein_id="HJN06750.1"
                     /translation="MKNFVQILILAIGLVFYSCGNSNSEGISTDIVKNTKSAVKLGEE
                     GTAPKILFDETTHDFGNMIRGERVVYSFKFVNIGGSDLVITKVSTSCGCTLVKYTDKP
                     VAPGEDGFIEVAFDSHGKKGFQNKSVTVLANTEPNSITLRVKAKVIQPERN"
     gene            complement(1264..>2248)
                     /locus_tag="QF480_09065"
     CDS             complement(1264..>2248)
                     /locus_tag="QF480_09065"
                     /inference="COORDINATES: protein motif:HMM:NF024974.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="gliding motility-associated C-terminal
                     domain-containing protein"
                     /protein_id="HJN06751.1"
                     /translation="EGGTYVSVGTDSVYLTKITDSTTFKVIVIDTIAHDTCESEPFGV
                     SVHQQINIEFNQLQLTCTNGDDINGNSAKVKAIATGEFQPDEYHYFWDVPPIQIAPGD
                     SSLVVDLKAHQYYMITVRDNYGCPKTDTVWTEAYDNPEVEIYADPDTAYLQNPFITYS
                     FINISEDSIPISNHFWWFSDTIDDPNNTSDLLNPTYTYGEVGEYYVILTVYNPEGCDT
                     TFLKTVDVKPVKLFIPNVFTPGTGGPNEKFIITDDPDKTIFEDALNKFYVSSHLVVFN
                     RMGRTVYEAENYDNSWDGSNLPDGVYYFVLKCNGAKSTDIFKGSVTIIRGN"
BASE COUNT          737 a          444 c          319 g          748 t
ORIGIN      
        1 atatcggcaa atctctgagt taactcattc gtattaattg catactttat accgttctta
       61 tgttcaattg aatagttgtc aaggtttata tcaagaatat ccatgtcatc gaaaagattc
      121 attttcagaa tggtaaatcc tctagcggtt aaattcaaat tcagacttga atcaacaact
      181 tttgttagcc gtagttcggc aggtatatta ttatatgata ctttgaatga ataattaacg
      241 gtatagtcgt ccgataattt aataagcaac cagaacaagg atgcaataaa aatacaaatg
      301 atgaaaatca gtctgtcgct tctaaagcgg aaaaaagatt gttttttttt tcgatctttt
      361 tcagaatgat attttgatga actactgctc ataaaaaaat cggaatttat atttaaagca
      421 actttgggct acaaaaaatt attaatgcga actatttttt ctgcccaact tctgttttat
      481 ccatcacaat tgcacttttt tcaacaacta atctaacctg agcagcaaca tcaataacaa
      541 ctgtagtttc ctttatctct gcaactttac catgaacccc tccaatggta acaactttat
      601 ctcctttttt cagagcttcc ctgaattttt tctgatcctt attctttttt gtctgaggtc
      661 tgataaagaa aaaataaaac acaatcaaaa ttaggaacaa gggtaacatc gacatccaac
      721 caccatcgga tgattcggtt tcctgcaata gtaaaaataa catatccatt ttataaaata
      781 tttagtttaa ttaatttctt tcaggttgta tcacctttgc tttaacacgc aaagtaatag
      841 aatttggctc tgtattggct agaactgtaa cacttttatt ttgaaaacct ttttttccgt
      901 gactatcaaa agcaacttca ataaaaccgt cttcaccagg tgcaaccggt ttatcggtat
      961 acttaaccaa agtacatcca caacttgtac ttactttggt aattacaagg tcagacccac
     1021 caatatttac aaacttaaaa ctgtaaacaa cacgttcgcc tctgatcata ttaccaaaat
     1081 catgggtagt ttcatcaaat aatatctttg gtgctgtacc ctcctcaccc aattttacag
     1141 ctgatttcgt atttttaact atatcagttg aaataccttc actattactg tttccacaag
     1201 aatagaaaac taaacctatc gctaatatta atatttgaac aaaattcttc atttgagcat
     1261 tcattaattt cctctaatta tggttaccga acctttaaaa atatcagtac tttttgcacc
     1321 attacattta agcacaaaat aatacacccc atcaggcaag ttactaccat cccaactgtt
     1381 gtcatagttt tccgcttcat ataccgttct tcccatccgg ttgaacacta ccaaatgcga
     1441 acttacataa aacttattta atgcatcctc aaaaatggtt ttatcaggat cgtcagtaat
     1501 aataaatttt tcatttgggc caccagttcc aggcgtaaaa acatttggga taaataattt
     1561 tacaggtttt acatcaacag tctttaaaaa agtagtgtca catccctcag ggttgtatac
     1621 cgtaagaata acataatact cccccacttc accataagta taagttgggt ttaataaatc
     1681 gctagtatta ttgggatcat caatagtgtc actaaaccac caaaaatgat ttgaaatagg
     1741 aatactgtcc tccgaaatat taataaatga gtatgttatg aacggatttt gcagataggc
     1801 agtatctgga tcggcataga tctcaacttc aggattatca taggcttctg tccaaactgt
     1861 gtcagttttt ggacatccat aattatccct aacagtgatc atatagtatt ggtgagcttt
     1921 aaggtcaacc accaatgatg aatcgccagg agctatttga ataggtggca catcccagaa
     1981 ataatggtat tcatccggct gaaactcacc tgttgctatg gccttaactt ttgccgaatt
     2041 accatttata tcgtcaccat ttgtacaagt taactgcaac tgattaaatt caatatttat
     2101 ttgctgatgc acactaacac caaagggctc actctcacat gtgtcatgcg ctatggtgtc
     2161 aattactatt accttaaatg ttgtggaatc ggttattttg gtgagataaa cagaatcagt
     2221 tccaacagaa acatatgtac ctccttct
//
LOCUS       DASCQP010000532         1619 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001930110, whole genome shotgun sequence.
ACCESSION   DASCQP010000532 DASCQP010000000
VERSION     DASCQP010000532.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1619)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1619)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1619
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001930110"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1443
                     /locus_tag="QF480_09070"
     CDS             <1..1443
                     /locus_tag="QF480_09070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018336464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJN06752.1"
                     /translation="KVKVIIVGRISKTFKQFPQTFWIANSIELFERWAWYGFFMLFAN
                     YLTGSSDVGGLEFTQTQKGLIMGVGTGILYFLPVLTGSIADKYGYKRVLLIAFIIYTS
                     AFILLPLFNTFAGVFAMYLYLAVGAALFKPIIQATVAKTTTNNTSSIGFGIFYMMVNI
                     GAFFGPMITLLYKSNYELVFYISAGVVALNFILLLFYREPGRTKSTETLSSTINQVFK
                     NIWLVLHDFKFVIFLLIVAGFWTMYYQLFFTLPVFVTQWVDTSNLYDFFNTYIPVVAK
                     EYGSHGNMESEFIVNFDALFIILFQVFISALVMKKKSLNTMIAGFIIASIGMALTLVT
                     QNVIFVLVAILIFSIGEMAASPKITEYIGRIASSDKKALYMGYSFLPVFLGSIFAGFI
                     SGNVYQSMSDKHALLVKEVSLRGFIIPDGLSSNKYFAEAASQMNLSQRELTNYLWNNY
                     HPSNIWIVIISIGLFSALCLWLYNRFLIKA"
BASE COUNT          465 a          246 c          289 g          619 t
ORIGIN      
        1 aaagtaaaag ttattatagt gggccgtatc agcaaaacat ttaaacaatt ccctcaaact
       61 ttctggattg caaatagtat agagctattt gaacgatggg catggtatgg tttttttatg
      121 ctcttcgcaa actatcttac tggttcatca gatgttggtg gactcgagtt tactcaaact
      181 caaaaaggtc ttataatggg ggtcggcact ggaattctat atttcttacc tgtactcact
      241 ggctcaattg ctgataaata tgggtataaa cgcgttctgt tgattgcttt tataatatac
      301 acctctgcat ttattttact tcctttgttt aacacttttg ccggagtatt tgcaatgtac
      361 ctgtatttgg ctgttggtgc tgctttgttt aaacccatta ttcaggcaac ggttgccaaa
      421 accacaacta ataatacatc ttctattggc tttgggattt tttatatgat ggtaaatatc
      481 ggagcttttt tcggaccaat gattactctt ctttataaaa gtaattatga acttgttttc
      541 tatatttctg ctggtgttgt tgcattaaac ttcatacttt tattatttta ccgtgagccg
      601 ggaaggacaa aatcgactga aacactatca tcaacaataa atcaggtttt taagaatatt
      661 tggctcgttt tacacgattt taaatttgtg atttttctct tgattgttgc aggtttttgg
      721 acaatgtatt accagctgtt ttttacttta cctgtttttg taactcaatg ggtcgacact
      781 tcaaatcttt atgatttttt taatacatat attcctgttg ttgcaaaaga gtatggtagt
      841 cacggaaata tggaatcgga gtttatcgta aactttgatg ccctgttcat tatactgttt
      901 caggttttta tctcagcttt ggtaatgaaa aagaaatcat taaatacgat gattgctggc
      961 tttattattg cctcaatagg aatggcgtta acacttgtta cacaaaacgt aatatttgta
     1021 cttgtggcaa tactaatttt ctcaattggc gaaatggcag catcaccaaa aattaccgaa
     1081 tatattggtc ggattgcgtc atctgacaag aaagcacttt atatgggtta ctcttttctt
     1141 ccggtttttt tagggagtat ttttgctggt tttatttcgg gaaatgttta tcaaagtatg
     1201 tcagataagc atgcattact tgttaaagag gtgagtttga ggggattcat tattcccgat
     1261 gggctttctt ctaataagta ctttgctgaa gcagcttcgc agatgaacct gagtcagaga
     1321 gaattaacaa actatttatg gaataattat cacccctcaa atatctggat agtaataatt
     1381 agtattggat tgttctcagc tctatgttta tggttataca accgattttt aataaaagcg
     1441 tgagggtgat gctaatctat ttgtaaaaaa ataagtaaaa aaatgtatta acacttggtt
     1501 aaataacaga tttaactaaa tttgtaatct ggctataatt tatttattca ctaactaaca
     1561 ttattatgaa acatttttta cgtttattat cattgtttgt ggtagttgtt tttgcttct
//
LOCUS       DASCQP010000533         3448 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001930246, whole genome shotgun sequence.
ACCESSION   DASCQP010000533 DASCQP010000000
VERSION     DASCQP010000533.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3448)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3448)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3448
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001930246"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            134..1219
                     /locus_tag="QF480_09075"
     CDS             134..1219
                     /locus_tag="QF480_09075"
                     /inference="COORDINATES: protein motif:HMM:NF012470.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase"
                     /protein_id="HJN06753.1"
                     /translation="MKYIIKIYLLLIISVAIISCGEERTDDTVASKKHPNVILLIGDG
                     MGLSQLSAAFYYGKSESNFARFKEVGLIVTSSAIENITDSGAGGTAFANGERTFNSFI
                     GVNLDSVAIRNLVDVLSKKGYKTGIISTSSVTHATPACFYAHVVDRGMQDKIAEQLVD
                     SEIDFFAGGGTSFFSNRKDSLDLIKKLSENGFVVKTDTTSKKLDHDNKYGFLLAENGM
                     PTMLESRGDFLPEYTKLALDLFSQQQKSFFLMVEGSQIDWAGHEGNADYLIAEVLDFD
                     KTVGVAMDFAANNNNTLVIVLADHETGGFTLAIKDGDYSIIKPTFASSGHSCTLIPVL
                     ASGPGAESFKGIYQNNEIFHKILAVTN"
     gene            complement(1352..1870)
                     /locus_tag="QF480_09080"
     CDS             complement(1352..1870)
                     /locus_tag="QF480_09080"
                     /inference="COORDINATES: protein motif:HMM:NF013053.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HJN06754.1"
                     /translation="MISSSGASRVSSAVIVSDTQNDIIPLYRQESFFTCANLVLDKAF
                     NADIPIYYVMLSSLSGTPNWDLPSQLHYYDNGKIVDKDDVFDAFEGTILHKELLTKGI
                     SKVYVIGVSSMGCVLGTCRGSVKLKYELTLVEDAHDEPIGYRDESAIDQCNQIFLHEN
                     LGQLVVAENIVF"
     gene            1875..2174
                     /locus_tag="QF480_09085"
     CDS             1875..2174
                     /locus_tag="QF480_09085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06755.1"
                     /translation="MLDRDVIPVIIKGGNRSNKKTIPEDFELSTHKQFIIKTFEDGNP
                     KTSAELITDIKKEYNVGESVAKKFKQYFLNTKLIKDKGGGHKRQYVLNSSNQFFV"
     gene            complement(2696..3172)
                     /locus_tag="QF480_09090"
     CDS             complement(2696..3172)
                     /locus_tag="QF480_09090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06756.1"
                     /translation="MKIDELYKSLTPIEKEQLYTLLKNDIGITPQLDKVKSGLNQYQK
                     VLCPHCRSGDIYGHGVYKGRKRFKCKQCKKTFNDLTGTAISGIKKVEKFQEYRELTIK
                     RLTIRKAAKKLGVNVKTILDWRHKLLSAVATMNGVSFSRIVECDDKQLDVPHYLKT"
BASE COUNT         1189 a          586 c          582 g         1091 t
ORIGIN      
        1 ggcactcaag tttaagcacc aaccgttgtt accatttctt tttttaagaa gggagtacgc
       61 acatgaaaat ttaatctctt aaacttgatt ttttaattaa ttgaaattaa aacatttaac
      121 gaattatata cacatgaaat atatcatcaa aatatatcta ttactaatta tttccgtagc
      181 aataatttcg tgcggtgagg agagaacaga tgatacagtt gcctcaaaaa aacatcctaa
      241 tgtgattttg ctgattggtg atggcatggg attaagtcag cttagtgcag ctttttatta
      301 tggtaaatct gaatcaaact ttgcgagatt taaggaagta ggattaatag ttacttcatc
      361 tgcaatagag aatataactg attctggtgc aggcggaaca gcttttgcca atggggagag
      421 aacttttaat agtttcattg gtgtaaatct tgactcagta gcaatccgta atttagtgga
      481 tgtcctttca aaaaagggct acaaaacagg aattatttct acatcttctg ttactcatgc
      541 tacgcctgcc tgcttttatg cccatgtagt ggatagaggt atgcaggata agattgctga
      601 gcaactcgtt gattctgaaa ttgacttctt tgcaggaggt ggcacttctt ttttcagtaa
      661 cagaaaggac agtcttgatt tgataaaaaa actaagtgaa aatggtttcg ttgttaaaac
      721 tgatactact tccaagaaac ttgaccatga taacaaatat ggtttcttat tggctgaaaa
      781 tggaatgcct actatgttgg agagcagggg tgattttctt cccgaataca caaaacttgc
      841 attggattta ttttcacaac aacaaaaaag tttttttcta atggttgaag gttcccaaat
      901 tgactgggca ggccatgaag gcaatgctga ttatttaatt gctgaggtat tggattttga
      961 taaaactgta ggtgttgcta tggattttgc agctaataat aataatactc tggtaattgt
     1021 acttgctgat cacgaaacag gaggttttac gcttgccatt aaagatggtg actattcaat
     1081 tattaaacca acttttgcat cttccggaca ctcttgtact ttaattcctg tattggcaag
     1141 tggcccaggt gctgagagtt ttaaaggaat ttaccaaaac aatgaaatct tccataaaat
     1201 tctggcagta acaaattagt gggagtagac caatcctaat tctttaacag tataaggctg
     1261 tgtattttgg tgacaccata taaaatcaat cgcaaaaaat aggtgctgtt taaaacttga
     1321 ttccctgatt tatcctttac atcctacgaa gctaaaatac tatgttttcg gctactacaa
     1381 gttgtcccag attctcgtgt agaaatatct ggttacactg atcgatggcg gattcatccc
     1441 tatatccaat tggctcatcg tgggcatctt ctaccagggt tagttcatat ttaagtttaa
     1501 cagatcctct gcatgttccc agtacacaac ccatggatga tacccctata acatatactt
     1561 tactgatacc ttttgtaagt aattccttat ggagaattgt accttcaaat gcatcaaaaa
     1621 catcatcctt atccacaatc ttaccattat cataataatg taactgactg ggtaaatccc
     1681 aattaggtgt tccacttaag gaagataaca taacgtagta aattggaata tcagcattga
     1741 aagccttgtc aagtacaaga ttagcacagg taaagaaact ttcctgacgg tataaaggaa
     1801 tgatatcatt ttgagtatca ctcacaataa ccgctgagga cacgcgggat gcaccactgg
     1861 aagatatcac atatatgttg gatagggatg ttatacctgt tatcattaaa ggtggtaatc
     1921 gaagtaacaa aaaaacaatc ccagaggact tcgaactttc aacacacaaa cagtttatta
     1981 tcaaaacatt tgaagacgga aatccaaaaa catcagctga attgattact gacattaaga
     2041 aagagtacaa tgttggtgaa tcggttgcaa agaaattcaa acaatatttc ctaaacacaa
     2101 aactgataaa agacaaaggt ggtggtcata aaaggcaata tgtattaaac agttcaaacc
     2161 agttttttgt ttgagtttgt aatccagttg ttatgtaggt gtttatatat acacctacaa
     2221 taccaaccaa ctgagatgtt acgttcagtt gttacgtacc aactggcata taacccttat
     2281 atatcaacac tttaactgtt tcagttgtta cagttgttat gcatataaaa aacaactcag
     2341 ttgttaagtg taccaactgg aaatatcaat aacaacaact gtaaactagt attatatgga
     2401 tttaataaaa agcaactgaa ctattaacaa tgatatcaga aactgcaatt agaaagaaat
     2461 caacacctca acactgtcta aacaccaaca aacatacggg tttcagctat ttcttaaaca
     2521 gcacagttaa atgccccaca acgcatataa acgccattta agaagctttt ttacattgac
     2581 tggtagtaga gtgccactaa tattttagca acaaaaaagc atcccatttt attaaaataa
     2641 cgtataaaga aatcactata ataatgtgga aattgactta agtaaaaagc aaaggttatg
     2701 ttttaagata atgtggaaca tctaattgct tgtcatcaca ttcaactatt cttgagaatg
     2761 ataccccgtt catagttgcg acagcagata ataatttgtg ccgccagtca agtattgttt
     2821 ttacattaac cccaagtttt ttggcagctt ttcggattgt caaacgttta atagttaact
     2881 cccgatattc ttgaaacttc tcaaccttct taatgccaga aatagcggtt cctgtaaggt
     2941 cattaaatgt ctttttacac tgcttacact taaaacgttt gcgtcccttg tatactccat
     3001 gaccatagat gtctccgcta cgacaatggg ggcataaaac tttttgatat tgattaagcc
     3061 cagattttac tttatctaat tggggagtta tcccaatatc attcttaagc agagtataca
     3121 actgttcttt ttctattggt gtgaggcttt tatataactc gtctattttc ataaaagtga
     3181 tttttataat cacaaagata ataaataaat ctacaatatt cttaaacata actaaagcaa
     3241 ataaatatta acaacaactg tataatgggg catagtatat tataaaaact caactgaaca
     3301 ataaaaccag taaacttgaa aaaatatcaa aataacgtaa aaagaataaa gtaatagata
     3361 tatagatagt agtgtatagt aagagtagat attgtagtat cccccatcat aagacaaagc
     3421 taaggtagac atttttctaa atttcttt
//
LOCUS       DASCQP010000534         4403 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001936677, whole genome shotgun sequence.
ACCESSION   DASCQP010000534 DASCQP010000000
VERSION     DASCQP010000534.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4403)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4403)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4403
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001936677"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..438)
                     /locus_tag="QF480_09095"
     CDS             complement(<1..438)
                     /locus_tag="QF480_09095"
                     /inference="COORDINATES: protein motif:HMM:NF015279.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl Co-A mutase-associated GTPase
                     MeaB"
                     /protein_id="HJN06757.1"
                     /translation="MSKRKHHQVDSALNVQKGIDQPAKVNPNVSEEFDRFKKDRLTSD
                     IIYDGIISGDRTLLSRGITLIESSLLSEKTDSRTLIQRCMPHSGKSLRIGVSGVPGVG
                     KSTFIETFGLNLINKGHKVAVLAIDPSSTRTKGSILGDKTRMEV"
     gene            complement(616..1677)
                     /locus_tag="QF480_09100"
     CDS             complement(616..1677)
                     /locus_tag="QF480_09100"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012512.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase family protein"
                     /protein_id="HJN06758.1"
                     /translation="MNWFASIYFIYKGNKRSIFAKAENLNMTGSIKDRMAFHILEQGY
                     SRGILKPGNLIIEATSGNTGIAFSAIGRALGHPVTIFMPDWMSAERINLIRSLGAEIV
                     LVSHEEGGFLGSIRRAEELAEATEGAFLPRQFSNEDNCSAHYKTTGPEIWWQLKFNSL
                     HPKAFIAGVGTGGTIMGTGRFLKEQDSTIQIRPLEPANSPTISTGYKVGKHRIQGISD
                     EFIPPILDVKYLDEIVSVDDGDAILMAQKLASELGMGVGISSGANFIGALMVQEELGM
                     DEVVVTVFADSNKKYLSTDLLGKETVKDHYLAPHIKLTGIRSIKQACHTCCDPQECKE
                     AVFREVCNDSSVPPCPIKV"
     gene            1649..2056
                     /locus_tag="QF480_09105"
     CDS             1649..2056
                     /locus_tag="QF480_09105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06759.1"
                     /translation="MKYILANQLIEKVYQAFVLLIIGAGLFIEFRKKNHNSDVVYQMI
                     LLISIIPLLAFTTYNLFIFELPIILYLIYFYKDLNITQKIMVVVGCILIGGNIHEITG
                     SALRDYLIGISVYTFGTISLITALILFKNAKLD"
     gene            complement(2128..2811)
                     /locus_tag="QF480_09110"
     CDS             complement(2128..2811)
                     /locus_tag="QF480_09110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06760.1"
                     /translation="MKKLSITLLVLFSTLAYSQNAFMVYEFEAKRGCQDAILELADGF
                     WGEANFKSGGIDIERMEIGGEPSTHRIVLYGDPANWGRSDTTVTKAQWEAFIEKFQNF
                     VEEWTFSTSGEILNWVGSDDNDAYQYGHIYDFKAEDEEAFKAAHEKLVGELSSEMDGR
                     DIGFGNFLINGYEGSTHWVYVGAKNWTDLVQNRRDMKAKTKEFEEYYNTRGGVEYVRN
                     FTIEILRSY"
     gene            3165..3674
                     /locus_tag="QF480_09115"
     CDS             3165..3674
                     /locus_tag="QF480_09115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cache domain-containing protein"
                     /protein_id="HJN06761.1"
                     /translation="MKKINFTLSILLIFICTTITISCNKDETQTMEEKVEIALAGFAE
                     DLTNNPPSIDDVSERVKQYMLANINDFYGSTVALIDTSGLAIYSPYWFKSNDALDEVN
                     LADTSYHINTQEWLRLPIDTGEAIWTDPYFDEGGGNIWMITRSVPVYIDGKIAAVATT
                     DLEVAPLDD"
     gene            3848..>4403
                     /locus_tag="QF480_09120"
     CDS             3848..>4403
                     /locus_tag="QF480_09120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06762.1"
                     /translation="MKVFKKIFLAIFILIVIILIAGYFWLRSTNPIYTGEIKLSGLDQ
                     KVEVVFDDFGVPYISLISCKWRLFIKKYREIMEKYPDSHTEVRYEDLVTYPEKEMKIL
                     CNFVGVPFSAEMFNFYLKADEARKFYAPVLLEKIFSSLFNKINTDKIGVYKTQLSIRQ
                     IKMADMTVGKYAEMMGYRREFKNYN"
BASE COUNT         1376 a          801 c          713 g         1513 t
ORIGIN      
        1 cacttccatc ctggttttat ctccaagtat actccctttg gtacgtgtac tgctaggatc
       61 aattgctaac actgcaactt tatggccttt gttaataaga tttaaaccaa atgtttcgat
      121 gaatgtgctt ttgccgacac ccggaactcc tgaaacccca atgcgcaatg actttccgga
      181 atgtggcata catcgctgaa ttaatgtcct ggaatccgtt ttttcactaa gcaatgagct
      241 ttctattaaa gtgataccac gactcagtaa cgtcctatct ccacttatta tgccgtcata
      301 aataatatct gaggttaatc tgtctttttt aaaacgatca aattcttctg atacgttagg
      361 attaactttc gcaggctgat caatcccctt ttgtacattt aacgctgaat ctacttgatg
      421 gtgtttcctt ttagacattt cttaagtttg attaactaca aaccagttat aataatgcaa
      481 atatacataa taggtgtagt aattatttta agttgtttcg agcaccaggt tcttaaacat
      541 atttttctag cacaactaga taaaaagata attcagaaca tagttgggtt agtcaactac
      601 tcataaaatt tttaatcaga ccttaatggg acatgggggt accgaactat cattgcaaac
      661 ctctctaaac actgcttcct tacattcctg agggtcgcaa caagtgtggc atgcctgttt
      721 aatcgatcgg atgcctgtga gttttatgtg gggtgcaaga taatgatctt taactgtttc
      781 tttaccaagc aaatccgtgc taagatactt cttgttacta tcggcaaaaa cagtaaccac
      841 tacttcatcc atacctagct cctcctgaac catcagggct cctatgaaat ttgccccaga
      901 tgaaattcca acacccatcc ctagttcact agcaagcttt tgcgccatca aaattgcatc
      961 accgtcatca acactaacta tctcgtccaa atactttaca tccaaaattg gtggaataaa
     1021 ctcatcagaa attccttgta tacgatgctt tcctacctta tatcctgttg atattgttgg
     1081 agagttagct ggttccaatg ggcgaatttg tatagtagaa tcctgttctt taaggaatcg
     1141 tccagtcccc ataattgtac ccccggttcc taccccagcg ataaaggctt ttggatgaag
     1201 agaattaaac ttcaattgcc accaaatttc tggtcctgtt gttttgtaat gagcactaca
     1261 attgtcttcg tttgaaaact gccttggtaa gaatgcgcct tctgtggctt cagctaattc
     1321 ttctgctcgc cggatactac ctaaaaatcc accttcctca tggcttacta gaacgatctc
     1381 tgcaccaagg ctacggataa gattgatgcg ttccgcactc atccaatcag gcataaaaat
     1441 ggtaacagga tggcctagag ctcgcccgat agcagaaaac gctatgcctg tattaccgct
     1501 tgttgcttca ataataagat tgccaggttt tagaatacct ctcgaatagc cctgctccaa
     1561 tatatggaaa gccattctgt cttttatgct ccctgtcata ttcaggttct cagcttttgc
     1621 aaaaattgaa cgcttattac ccttataaat gaaatatata ctagcaaacc aattaattga
     1681 aaaggtttat caagcttttg tattattaat aattggtgct ggattattta ttgagtttag
     1741 aaagaagaac cacaatagtg atgttgtata tcaaatgata cttctaataa gcataatacc
     1801 tttgttggca tttactactt ataatctatt tatatttgaa ttacccataa tactttactt
     1861 aatatacttt tataaggatt tgaatattac tcaaaaaatt atggttgtgg ttggatgcat
     1921 tttaattgga ggaaatatcc acgagataac gggaagtgct ttaagggact atttaatagg
     1981 tatatcggtt tatacctttg gtacaatatc tctaattact gctttaattt tgtttaaaaa
     2041 tgcaaaactt gattagaggt taatatagtt ataaccaaaa aaagagggta tgaaagtacc
     2101 ctcttttttc ttttcacatt gatattctta atatgatctt agtatttcaa ttgtaaaatt
     2161 gcggacatat tcaacacccc ctctggtatt ataatattct tcaaactctt ttgtttttgc
     2221 tttcatatct cgtctgttct gaactaaatc tgtccaattc ttagcaccaa cataaaccca
     2281 gtgagtggat ccttcatacc cgttgataag aaagtttcca aaacctatat ctcttccatc
     2341 catttcagag gataactctc caactagctt ctcatgagca gctttaaatg cttcctcatc
     2401 ttcagccttg aagtcatata tatgtccgta ttggtatgca tcattatcgt cactaccaac
     2461 ccagtttaaa atttctcctg aagtactaaa ggtccattct tcaacaaaat tttggaattt
     2521 ctcaataaat gcttcccatt gagcttttgt tacagtggta tcacttctgc cccagttagc
     2581 aggatctcca tagagtacaa ttctatgtgt agaaggttct ccaccaattt ccattctttc
     2641 aatatcgatt ccccctgatt taaaattagc ctcgccccag aagccatcag ccaattctag
     2701 aatggcatct tgacaacctc tttttgcctc aaattcataa accataaatg cgttttgtga
     2761 ataagctaga gtgctaaaaa gcactagtaa agtaatagat aattttttca ttatagtata
     2821 tttagatatt ttgataactc taattttggc gtttaataat tcatttcatt aagttatata
     2881 agatttgatt tactttaaaa aagaatttag ctgaattatt aatataagtt catgcctgct
     2941 ggaaactaaa agcttgttta aaagttattt ttcttatatc tggtgtgaac ctatatttga
     3001 acaaatataa tggtttaatt ttaaagatac ttgatatttt atgcctaaag ttttgaatgt
     3061 actcgaaaat aagatctgag aatgaattat taaaagtgtt aataaaaaag gttgtatctt
     3121 tccacctgtt tttcaaattc agataattaa ttaaaatttt aaaaatgaaa aaaatcaatt
     3181 tcacattaag tattctatta atatttattt gcactacaat taccatttcc tgcaataagg
     3241 atgaaaccca gacaatggaa gaaaaagttg aaattgctct ggcaggattt gccgaagatt
     3301 taaccaacaa tcctccatca attgatgatg tttctgaaag agtaaaacaa tatatgcttg
     3361 cgaacattaa tgatttttac ggttccacag ttgctttaat tgacacttct ggtttggcaa
     3421 tatacagtcc atattggttt aaatctaatg atgctcttga tgaggtaaac cttgctgaca
     3481 catcctatca catcaataca caggaatggc ttcgtttacc aatcgacaca ggtgaggcaa
     3541 tttggacaga tccatatttc gatgaaggtg gtggtaatat ttggatgata actcgttcag
     3601 ttccggttta catcgatgga aaaatcgcag ccgtagcaac tactgacttg gaggttgccc
     3661 cattggatga ttagatttta tatggttaaa aaatgtattg tttttaatcc agatttcatt
     3721 ggtgattatt ccaataatat tgttcatggt aattatttcc actaggaaac aattccacca
     3781 ttattttcat ggttttaagt attattgcaa agtattatgt ttttaaacca attagacgat
     3841 tttattaatg aaagtattta aaaaaatttt ccttgcgata tttatactta ttgtcatcat
     3901 tttgattgcg ggatatttct ggttaagatc aacaaacccc atctacacag gtgaaataaa
     3961 gctatctgga ttagatcaga aagttgaggt ggtttttgat gattttggtg taccttatat
     4021 ttctttaata tcttgcaaat ggcgtttatt catcaaaaag taccgagaga taatggaaaa
     4081 gtatcctgat tctcacactg aggttcgtta tgaagatttg gtaacttatc ctgaaaagga
     4141 aatgaaaata ttgtgcaatt ttgttggtgt tccatttagt gctgaaatgt tcaactttta
     4201 tttaaaagcg gatgaagcaa ggaaatttta tgcaccggta ctacttgaaa aaatattttc
     4261 aagtctattc aataagatta atactgataa gattggcgtt tacaaaacac aattgagtat
     4321 ccgtcagata aaaatggcag atatgacggt cggtaaatat gcagaaatga tgggttatag
     4381 acgggaattt aagaactata ata
//
LOCUS       DASCQP010000535         2615 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001941712, whole genome shotgun sequence.
ACCESSION   DASCQP010000535 DASCQP010000000
VERSION     DASCQP010000535.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2615)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2615)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2615
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001941712"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(107..490)
                     /locus_tag="QF480_09125"
     CDS             complement(107..490)
                     /locus_tag="QF480_09125"
                     /inference="COORDINATES: protein motif:HMM:NF024957.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HJN06763.1"
                     /translation="MIFSLELISQEEVLLKGTFNVGFEAGVQFTGVDDSGMPISKGGV
                     GYSSGPFLDYYLSEIIKFRAGLYFDHRAFSLSDMGLISDTGYIGKSSFYDITEKYNVN
                     YLTIPLSLIYVKGNDCLTSNPLGQI"
     gene            complement(554..1282)
                     /locus_tag="QF480_09130"
     CDS             complement(554..1282)
                     /locus_tag="QF480_09130"
                     /inference="COORDINATES: protein motif:HMM:NF024778.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HJN06764.1"
                     /translation="MIETLVDFPLLFGILASIIHVVAGPDHLAAISPLALNAKFRPWL
                     IGMSWGIGHVAGMLLIGLVFFFFRELIPIEFISHNSERIVGLLLIIIGIWALVKVINY
                     HRDKHVHAHSHTNMDGSAYIHKHEHSHVHSLKHSHNDDRVKEKQSYWAAAAIGILHGF
                     AGVSHIVSMLPTLAFSNNYQAVMYLVGFGVGTIVAMVVFSFLLGILAKTATKQRKDTV
                     FIGINVFAGISAIFVGILWMWNTW"
     gene            1401..2135
                     /gene="truA"
                     /locus_tag="QF480_09135"
     CDS             1401..2135
                     /gene="truA"
                     /locus_tag="QF480_09135"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009275803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HJN06765.1"
                     /translation="MQRYFIKLSYNGANYHGWQMQENAHTVQAEITDKLSLLLEEKIH
                     IVGCGRTDTGVHAHEFYAHFEVDDLKISLKDIVYKLNSFLPSDIVIHDIYRVPGDLHS
                     RFSATSRTYKYYISIIKDPFNEKTRYYFNGSLDINAMNQACANLYEHTDFTSFSKLHT
                     QTATNNCIIQLAKFERIENELIFTITADRFLRNMVRAIVGTLFEIGKGKMKAEEINRI
                     IKAKDRSMAGFSVPAHGLFLERVIYP"
BASE COUNT          924 a          451 c          420 g          820 t
ORIGIN      
        1 ccattgaaat attgataact tccttaacgc ttcgctagaa gttaccaaca tttcaacagt
       61 caagaaacaa catcaaaaaa agtaaaagtg tctataaata aaaaagctaa atttgtccaa
      121 gagggtttga agtcaaacaa tcatttcctt tgacataaat taaactaagt ggtatggtta
      181 aatagttaac gttatacttc tctgtgatat cataaaaact agatttgcca atatagccag
      241 tatcgcttat caaacccatg tcgctaagag agaatgctcg atggtcgaaa tataatccag
      301 ctcgaaattt aattatttct gacagataat aatccaaaaa aggacctgaa gagtacccaa
      361 caccaccctt agaaatgggc atgcctgaat catccacacc tgtaaattga acgccagcct
      421 caaacccaac attaaaagta ccctttaata aaacttcttc ctgtgatatt aactctagac
      481 taaatatcaa agtaaaaagt ataacgattg gaagaagtct atatttttta agaaataaca
      541 atctatctaa taattaccag gtattccaca tccataatat tccgacaaaa atagcactaa
      601 ttcctgcaaa tacattaata ccaatgaaaa cagtatcttt tcgctgtttt gttgcggttt
      661 ttgccaatat ccccaataaa aaagaaaata caaccatagc aacaattgta cctaccccaa
      721 atcctactaa atacataaca gcctgataat tatttgaaaa tgctagtgtt ggtaacatgc
      781 tgacaatatg cgaaacacct gcaaaaccgt gaagaattcc aatggctgcc gctgcccaat
      841 aagactgctt ttccttaact ctgtcatcat tatgactatg ttttagtgaa tgtacatgtg
      901 aatgttcatg tttgtggata tatgcacttc cgtccatatt tgtatgtgaa tgtgcgtgta
      961 catgcttatc cctgtggtag tttattactt ttacaagagc ccagatgcca attattatga
     1021 gtagtaatcc tactattctt tcactattgt gagaaatgaa ttcaatagga atcaactctc
     1081 tgaaaaagaa aaaaaccaaa cctatgagca gcatgcctgc tacgtggcca ataccccatg
     1141 acataccaat caaccaaggt cggaatttag cgtttagtgc caaaggacta atagcagcaa
     1201 gatgatcagg gcctgcaaca acatgaataa ttgatgccaa gattccaaat aataagggaa
     1261 aatctactaa agtttcgatc attatattcc tgttaaataa ttatacaaag atacttctat
     1321 tgttaattaa ttcacagaga aatttgagta ttttttataa aaaaacgaac tatttttgtt
     1381 tgattaaata tagttaatac atgcagcggt attttatcaa attatcatat aatggagcaa
     1441 actatcatgg atggcaaatg caggaaaatg ctcatactgt ccaggctgag ataactgata
     1501 aattatcgtt attgctagaa gagaagattc atattgttgg ttgtgggagg acggataccg
     1561 gagtgcatgc acacgaattt tatgctcact ttgaagtaga tgacttaaag atatctttaa
     1621 aagatatagt ctacaaacta aatagttttc taccttcaga tattgtcatt cacgacatat
     1681 atagagtacc tggcgatctt cacagcaggt ttagtgccac tagtcgtacg tataaatatt
     1741 atatttcaat aattaaagat ccgtttaatg aaaagacgag gtactatttt aatggatctc
     1801 tcgatattaa tgcaatgaat caagcctgtg caaatttata cgagcatact gattttacca
     1861 gtttctcaaa attacacact caaacggcca caaacaattg cattattcag ttggctaaat
     1921 tcgaaagaat tgaaaacgaa ttaatattta caataacagc cgacaggttt ttgcgtaata
     1981 tggtccgggc aattgttggt actctttttg agataggtaa aggtaagatg aaagcagaag
     2041 aaattaatag aattatcaaa gctaaagatc gtagtatggc cggcttttca gtaccagcgc
     2101 atggactatt tctcgaaagg gtaatatatc cataagggat agataatcat gctttatttt
     2161 ttaattaata acttctcaaa aatgggttat tcattatttt aattgcatta gttttagcct
     2221 cttaaattat ttagcaattt tctcaaatat atttagaaaa agataattat gggaggcttt
     2281 tttggaacca tctcaaaatc tggttgcgtt aacgaactat tctacggaac agattataat
     2341 tcacacctcg gtacaaaaag gggaggcatg gctgtattga attcaacatc gatacggaga
     2401 accagtcatt attaattcaa atttaagttc tcatttttct gatataattc ctgaaatcaa
     2461 tttaggttcg atagtgaaca aaaattgggt tgtatattct atttattaaa aaggcttttg
     2521 attatttctt taacaggcct tattgagtga atgtcttcaa tactatatcc tgccacccaa
     2581 acagttttgt aagtaggttt atttgcagct cttct
//
LOCUS       DASCQP010000536         4878 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001942440, whole genome shotgun sequence.
ACCESSION   DASCQP010000536 DASCQP010000000
VERSION     DASCQP010000536.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4878)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4878)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4878
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001942440"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(176..415)
                     /gene="rpmB"
                     /locus_tag="QF480_09140"
     CDS             complement(176..415)
                     /gene="rpmB"
                     /locus_tag="QF480_09140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005857630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HJN06766.1"
                     /translation="MSRICQITGKKVISGNNVSHSHAKTKRKFHPNLHTKKFFVPETS
                     KWITLMVSANGIRIINKKGISVALKDAAEKGYYKV"
     gene            642..1694
                     /locus_tag="QF480_09145"
     CDS             642..1694
                     /locus_tag="QF480_09145"
                     /inference="COORDINATES: protein motif:HMM:NF022077.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mrp/NBP35 family ATP-binding protein"
                     /protein_id="HJN06767.1"
                     /translation="MSKFITNHDVTDALKEVIFFAKQNNIVDLNMVDNIEIKDNDIKV
                     SIVFPKVDDPAVGIVSNSITKTLKEKLGDEINIDVKPISEKDKGLGPLSGVKNIIAVI
                     AGKGGVGKSTVAANLAIALSKTGSKVGILDADIMGPSVPIMFGVEGQKPGILEREGKS
                     LLVPLENHGVKILSLGFFVQPDQALMWRGSMINNAFNQLMKDSEWGDLDYLVIDMPPG
                     TGDIQLTLAQSYNIRGTVLVTTPQRIATADVRRAAMMYRQDKLTIPLLGIVENMSYFT
                     PDELPDKKYFIFGKGATDELAKQLGIPVLGSIPIVEKIVESGDGGLPIVLDENEKVGT
                     EFAKIANNVQNEIDKL"
     gene            1719..1967
                     /locus_tag="QF480_09150"
     CDS             1719..1967
                     /locus_tag="QF480_09150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015759013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifU family protein"
                     /protein_id="HJN06768.1"
                     /translation="MDNTNEELIQKVQNVLEQVRPYLQADGGDIKFVNITDDNIVNVE
                     LTGACGSCAFSTVTLKNGVETTLKKVIPEIKEVVAVNL"
     gene            complement(2078..3295)
                     /locus_tag="QF480_09155"
     CDS             complement(2078..3295)
                     /locus_tag="QF480_09155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009227735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-adenosylmethionine:tRNA
                     ribosyltransferase-isomerase"
                     /protein_id="HJN06769.1"
                     /translation="MHITSSIEIEDYNYDLPDSKIAKFPLEMRDGSKLLFQSGNAITE
                     KRFSDLPKLLPANSLLILNETKVVNARLLFKKRTGATIEIFCLEPIEPVTDFQQAYQQ
                     KSPVVWKCFIGNASRWKSGRLELEFSIYDITVTLFAEKVSQLSEGFLVSFSWDNYDLT
                     FSEIIHVVGQVPIPPYLNRKANTEDSKWYQTIYANHQGSVAAPTAGLHFTKNVINNLQ
                     KNGIKTDKLTLHVGAGTFKPVISQTIADHEMHTEKIVVEIDTLKHIRSKLNHPVIPVG
                     TTSMRTLESLYWMAVKLNNGDDEFFVDQWDPYELIVKPDFNCTKAMSLLISYLEEKKL
                     SELNGETQLMIAPGYSFKIASGLITNFHQPKSTLLLLVSALVGDSWKQVYNFALQNDF
                     RFLSYGDSCLFLP"
     gene            3439..4161
                     /gene="pssA"
                     /locus_tag="QF480_09160"
     CDS             3439..4161
                     /gene="pssA"
                     /locus_tag="QF480_09160"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR00473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003882 - CDP-diacylglycerol-serine
                     O-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HJN06770.1"
                     /translation="MKNHIPNIITLFNMLSGILSIYSVMNGNIDLAAYFIFIAAAFDF
                     LDGLAARLLNAKSEIGGQLDSLADVVSFGVAPGFILFHMISISHGQPVDSSEEFNIIP
                     FAAFIVPAFGALRLAKFNIDTQQTETFRGLPIPAIGILIASLPLIRADLYESQSFFYM
                     VMTNTYFYITIAVIGSLLMVSRFPMFDLKFNGFSWKNNMIKYIFLGVSLIMLLVLDTI
                     AIPFIILFYLFLSLVIFLVDIQ"
     gene            complement(4204..>4878)
                     /locus_tag="QF480_09165"
     CDS             complement(4204..>4878)
                     /locus_tag="QF480_09165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006254989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HJN06771.1"
                     /translation="NLIPYYVDNVRIRYLSDQLAKGYATGIDFKIYGEFVKGVDSWMS
                     LSLMQSKEDIYDDFYYDYYNADGDKIISGITIDTEVADSVRVEPGYIPRPTDQRVNFS
                     IFFQDYIPGHPYLKIHLRLLFNTGLPFGAPDTERYEHTLRMPDYRRVDIGFSYQFINE
                     GSTFGSGNPLKHFKNMWISLEVFNLLQIYNTVSYIWIKDINNRQFAVPNYLTPRLLNI
                     KLVAEF"
BASE COUNT         1584 a          825 c          817 g         1652 t
ORIGIN      
        1 cagaacaaat acagtaaaat aaatgctaaa ggaagtgagg aagaagtttt taacaggtta
       61 tcggatgaag tggaagagac tttaaaaaag aacttttaaa aaaaatattc ttaaaaacaa
      121 aaaagagatt ggcaataata ccaatctctt ttttttataa ctatctaaag tttatctata
      181 ctttgtaata acctttttct gctgcatcct taagagcaac acttatacct tttttattga
      241 ttatacgaat accattagca cttaccatta aagtaatcca tttactggtt tcgggcacaa
      301 aaaacttttt tgtgtgtaaa tttggatgaa actttctttt agttttggca tgtgagtgac
      361 ttacattgtt tcctgaaatc actttctttc ctgttatctg acaaattctt gacatctttc
      421 cgtagttttt taaccctttt ttaaaaggag tgcaaaataa gacataattt ttcaattatt
      481 caaatgattt ttgaaattat tttttttgca aatcaattca aaaattactc ccttatttag
      541 aatgctatat aaattatctg aatatgaatc atcatcaaaa ataatagtaa atttgcccct
      601 tcaatttttt taattataat ttaatctaaa taaaaagtaa tatgtcaaag ttcatcacaa
      661 atcacgatgt aacggatgca ttaaaagagg taatattttt cgcaaaacaa aacaacattg
      721 ttgatttaaa catggtcgac aatattgaaa taaaagataa cgacattaaa gtttcaattg
      781 tttttccaaa ggtagatgac ccggctgttg ggattgtcag taattcaatt acaaaaactt
      841 tgaaagagaa actgggagat gaaattaata tagatgttaa accaatatct gaaaaggaca
      901 aaggacttgg tcctttatca ggtgtaaaaa atattattgc agttattgct ggaaaagggg
      961 gcgttggaaa atcaaccgtt gcagcgaatc ttgctattgc attatctaaa accggcagta
     1021 aggttggcat tctggatgct gatataatgg gaccttccgt tccaattatg tttggtgttg
     1081 agggtcaaaa acctggtata cttgaaaggg aaggaaaatc acttttagta ccattggaaa
     1141 atcatggggt aaaaatactt tctttgggat tttttgttca acctgatcaa gcattaatgt
     1201 ggagaggttc aatgataaac aacgccttta accaattaat gaaagactct gagtggggcg
     1261 atcttgatta tctggttatt gatatgcctc ccggaaccgg tgacattcag cttacattag
     1321 ctcaatcata taatattaga ggaaccgtac ttgtaactac accacaaagg attgcgactg
     1381 cagatgtgcg tcgtgccgcg atgatgtaca gacaggataa acttacaatt ccattgctcg
     1441 ggattgtcga aaatatgtcc tactttacac cagatgaact tcctgataaa aaatatttta
     1501 tttttggtaa aggagcaacg gatgagttgg caaaacaact gggaatacca gtactaggat
     1561 ccattccaat agttgaaaaa atagttgaat caggtgatgg tggcttaccg attgtgttgg
     1621 atgagaatga aaaagttggg actgagtttg ctaaaattgc aaacaacgtt caaaatgaaa
     1681 ttgataaatt gtaattcata aacttaatta atatcactat ggataataca aatgaagaat
     1741 taatccaaaa agtacaaaat gtactagaac aagtaagacc atatttacag gctgatggtg
     1801 gcgatataaa atttgttaat attactgacg acaacattgt taatgttgaa cttacaggag
     1861 cttgtggatc gtgtgcattt agtacagtta cactaaagaa tggggttgaa acaactctaa
     1921 agaaagttat tcctgagatt aaggaagttg ttgctgtcaa tttgtagttt agcacaacct
     1981 taacggaaaa tacatcttgt tcatgtttgt aacatgaaca ttttaacaat actcaaatta
     2041 aatacatata tacgggtata gcctttttgc acttcactca aggtaaaaat aagcagctat
     2101 caccataact taagaaccga aaatcattct gcaaagcaaa gttatagact tgcttccagc
     2161 tatctccaac taatgctgat accaacaaca ataaagtact cttgggttga tggaagttcg
     2221 taattaaacc tgaagctatt ttaaagctgt aacccggagc tatcattaac tgtgtctcgc
     2281 catttaactc acttagtttt ttttcttcca aatagcttat taataacgac atagcctttg
     2341 tacaattgaa atcaggctta acaattagtt cataagggtc ccactgatca acaaaaaact
     2401 catcatctcc attatttaac ttaaccgcca tccaatacaa gctttcaagt gttcgcatac
     2461 tagttgtacc aactggtatt acagggtggt tgagcttgct cctgatatgt tttaatgtat
     2521 caatctctac aactattttt tctgtatgca tttcatgatc agcaattgtt tgtgatatta
     2581 ctggtttaaa agtaccagct ccaacatgca aagtaagttt atcagtttta atcccatttt
     2641 tctgcagatt gttgattaca tttttagtga agtgcaatcc tgctgttggt gcggccactg
     2701 atccttgatg attcgcataa atagtttgat accatttgct atcttctgtg tttgcttttc
     2761 gattgagata aggaggaatt ggaacttgtc caactacatg tattatctct gaaaaagtta
     2821 gatcataatt atcccagcta aatgagacta aaaatccttc tgaaagttga cttacttttt
     2881 cagcaaataa agtaacagtt atatcataaa ttgaaaattc gagctctaat ctcccactct
     2941 tccacctgct ggcatttcca ataaaacatt tccaaactac tggtgatttt tgttgatatg
     3001 cttgctgaaa atcggttacc ggttcaatcg gttctaaaca aaaaatttcg atagtagcac
     3061 ctgtcctttt tttaaatagc aatctagcgt ttacaacttt agtctcattc aatatcagaa
     3121 gcgagtttgc tggtagtaat tttggcagat ctgaaaatct cttttctgta attgcatttc
     3181 ctgattggaa cagtaatttc gacccatccc tcatttcaag cggaaacttt gctattttac
     3241 tatcaggaag atcatagttg taatcctcaa tttctatgct actagtaata tgcatcccgg
     3301 ccatttgtgt cggcaaaagt aaagttatta ccaatactta caatattacg ggttagttgc
     3361 tcaataaaat tataccttac ttagaccaaa tttgtgataa ttaatgtaca tttggttctt
     3421 tgttaaagca tataaaccat gaagaatcac attccaaata tcatcacgct tttcaacatg
     3481 ctttctggca tactttcgat atactcggtt atgaatggga atattgattt ggctgcatat
     3541 tttattttta tcgctgcagc ctttgatttt ttagatggac ttgctgcccg attattaaac
     3601 gcaaaatcag aaattggtgg acagcttgat tcgttagctg atgtggtttc atttggagtc
     3661 gcgcctggtt ttatactatt tcatatgatt agtataagtc atggccagcc ggttgattca
     3721 agtgaagagt ttaatataat tccttttgcg gcttttattg tgcccgcatt tggtgccctt
     3781 agattagcaa agtttaatat tgacactcaa caaaccgaaa cttttcgtgg cttaccaata
     3841 cccgcaatag gtatattgat agcctctttg ccactaattc gggctgacct atatgagagt
     3901 caaagtttct tttacatggt aatgaccaat acttactttt atattacgat tgcagtaatc
     3961 ggatcactac ttatggtgtc gaggtttcca atgtttgact taaaatttaa tggatttagc
     4021 tggaagaata atatgattaa gtacatattt cttggggtat ccttaataat gctcttagtg
     4081 ttagacacaa tcgcaatacc cttcattata ctcttttatc tatttctttc tttagtaatc
     4141 ttcctggttg acatacagta attgacttgg gttctaactg tgtgtttttc tttgttaagt
     4201 agattaaaac tccgctacta atttaatatt taacaaacga ggtgttaggt aatttggaac
     4261 agcgaattgc ctgttattta tatcctttat ccaaatatat gatacagtat tatatatctg
     4321 caataagtta aaaacctcaa gacttatcca catattctta aaatgcttaa gtgggttacc
     4381 tgaaccaaac gttgatcctt cgtttatgaa ttgatatgaa aagccaatat caactcttct
     4441 gtaatcgggc atccttaatg tatgctcata tctctcggta tcaggtgctc caaaaggtaa
     4501 tcccgtattg aatagtagcc gaaggtgtat tttgagataa gggtgacctg gaatgtagtc
     4561 ttgaaagaat attgagaaat taactcgctg atccgtaggg cgtggtatat atcctggttc
     4621 aactcttaca ctatcagcaa cttcggtatc aattgtaatt cccgatataa ttttatctcc
     4681 gtcagcattg taataatcat aataaaaatc atcataaata tcctcctttg attgcatcaa
     4741 cgacaaactc atccagctat caacaccttt aacaaactca ccataaattt taaaatcaat
     4801 acctgttgca tatccttttg caagttgatc acttagatat cgaattcgaa cattatcgac
     4861 ataataaggt ataaggtt
//
LOCUS       DASCQP010000537         3365 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001942900, whole genome shotgun sequence.
ACCESSION   DASCQP010000537 DASCQP010000000
VERSION     DASCQP010000537.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3365)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3365)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3365
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001942900"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..444)
                     /locus_tag="QF480_09170"
     CDS             complement(<1..444)
                     /locus_tag="QF480_09170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthan lyase"
                     /protein_id="HJN06772.1"
                     /translation="MISIHKLLTIAHYEMRTLLRGWFFRIFAGLSIFFIGIFNIAANI
                     AQSGAPFIYRALPASLPYTNLLLLNLGQAIVAVFLASEFLKQDRKNDTIEVIYARSMT
                     NAEYILGKAFGILTVFLILNLIILIEGIGFSFLSSDASQGIFEYLY"
     gene            complement(450..1334)
                     /locus_tag="QF480_09175"
     CDS             complement(450..1334)
                     /locus_tag="QF480_09175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014224249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJN06773.1"
                     /translation="MNISIQKLNKVYDNGKHALNDINLEIESGMFGLLGPNGAGKSTL
                     MRILVTLMKPTNGEVYINELDLGKSRGEIREMLGYLPQDFRFFTKLRTWEFLDYAARL
                     SGMKNKKQRLQKVDLWLEKVGLFDVRERNADQLSGGMKRRLGIAQALIGDPKILVVDE
                     PTTGLDPEERIRFRNIMSDISRHDAIIVLSTHIVGDISSICQGMALLDNGILSFNGSP
                     EELIDKAKGHVWRINTSGTEYDILKHKYPVISTIPTDAGWDVQFVADSVTDFYAEEIE
                     PTLEHAYVYFMEYLSNKN"
     gene            complement(1505..1912)
                     /locus_tag="QF480_09180"
     CDS             complement(1505..1912)
                     /locus_tag="QF480_09180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06774.1"
                     /translation="MKTLVKTTSLIVTLTILFSLNLNASVFNFTEEKYIDDIPFNTNE
                     VFTNIISEQNLAEFNFEDEEYIEDIPFNTECVTSDCLYKQAVSIDFQLDEDRYIDDIP
                     FDTECISSDCLYQKAMLIDFDFEEEGTIDDMKI"
     gene            2072..2548
                     /locus_tag="QF480_09185"
     CDS             2072..2548
                     /locus_tag="QF480_09185"
                     /inference="COORDINATES: protein motif:HMM:NF033205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IPExxxVDY family protein"
                     /protein_id="HJN06775.1"
                     /translation="MSKKLSKNIDYFEEYHILAIVSHLKDYNLCYHINLDLALDLVKY
                     EDLIFALPSVEESSFSWYYFADKVSRTFYYLIGNKGENSNLISSQKTVDYFFLIKNPV
                     NYQLIKSIASRLRTIPNITAVFDFNIRQFKDMDLLLETNELHELEYINRRLSKDSL"
     gene            2588..2971
                     /locus_tag="QF480_09190"
     CDS             2588..2971
                     /locus_tag="QF480_09190"
                     /inference="COORDINATES: protein motif:HMM:NF018508.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1232 domain-containing protein"
                     /protein_id="HJN06776.1"
                     /translation="MKLLSNLQHYIGYYDEVQLFNKLRVIGKKIGSQVIYYVLIMYML
                     ISDSKIPIKIRLVFMAALGYLILPTDLVADLIPAIGFTDDIAFLTYAISNAQEYITPE
                     VRNRAKEKLGQWISDDAEDADIVDV"
     gene            complement(2975..>3365)
                     /locus_tag="QF480_09195"
     CDS             complement(2975..>3365)
                     /locus_tag="QF480_09195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005468907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HJN06777.1"
                     /translation="YIDTDVSFVDLKQTLYYFAKELFGEETKTRFRPSYFPFTEPSAE
                     MDISCNICGGKGCNICKYTGWVEILGCGMVDPNVLDSCKINSKEYTGFAFGMGIERIT
                     MLKYQISDLRLFFENDVRFLEQFKSSI"
BASE COUNT         1103 a          562 c          535 g         1165 t
ORIGIN      
        1 atataaatat tcaaaaattc cctgagaagc atcactactt agaaacgaaa aacctattcc
       61 ttctataagg ataatgaggt ttaaaattag aaatacagtt aatattccaa atgctttacc
      121 aaggatatat tcagcattcg tcatcgatcg tgcataaata acctcgatag tatcgttttt
      181 tctgtcttgt tttaaaaact cagatgcaag aaacacagca acaatagcct ggcccagatt
      241 tagtagtagc agatttgtat agggtaatga agcaggtaat gctctgtaaa tgaacggagc
      301 tccactttgt gctatgttag cggctatgtt aaagatacca atgaaaaaaa tagatagtcc
      361 tgcaaaaatt ctaaaaaacc aaccacgtag caaagtacgc atctcgtaat gagcaatcgt
      421 tagtaattta tgaattgata tcatctatgt tagtttttgt tactcaaata ttccataaaa
      481 tatacatatg catgctcaag tgtaggctca atctcttcag cataaaaatc tgtaacacta
      541 tcagcaacaa actgaacatc ccatcctgca tcagttggta tagtagagat aactggatat
      601 ttgtgtttta aaatatcgta ctcggtacct gatgtattta tgcgccaaac atgtcctttg
      661 gctttatcga taagttcttc aggagatcca ttaaaactaa gtattccatt atctaacaga
      721 gccattccct gacaaatgct tgatatatct ccaacaatat gggttgacag aacaattatt
      781 gcatcatgcc tgctaatgtc agacattata tttctaaacc tgattctttc ttctggatca
      841 agaccagtgg ttggttcatc tactacaagt atttttggat caccaattag cgcctgggca
      901 attccaagtc gacgcttcat ccctcccgaa agttgatctg cattacgttc gcgtacatcg
      961 aataatccaa ctttttcgag ccacaaatca actttttgaa ggcgttgttt tttgtttttc
     1021 attccagaaa gtcgtgcagc gtaatcgaga aattcccatg tacgaagttt tgtgaaaaat
     1081 ctgaagtcct gtggaaggta tcctagcatt tctcttattt cgcctctgct ttttcccagg
     1141 tcaagttcat tgatatacac ctcgccattt gtaggcttca tcagtgtaac taatattcgc
     1201 ataagcgttg atttccctgc accatttgga cctagtaaac caaacatgcc gctttcaatc
     1261 tcaaggttta tgtcattgag ggcatgttta ccgttatcat atactttgtt cagtttttgt
     1321 atagatatat tcatacggta gttttattca gttcgaatcc gtctaatatt ctcattagtt
     1381 gcttttaaat aactatttgc taatcatttt gttgtaataa ttggtaaaat tataatgctg
     1441 tactattctc atattccaat aaacaattat agttatttat tattcgtgtt cttaatcaat
     1501 aaccttaaat tttcatgtca tcaatagttc cttcttcttc aaaatcaaaa tctattaaca
     1561 tagctttttg atataaacaa tctgaagaaa tacattcagt gtcaaaaggt atatcatcaa
     1621 tatatctgtc ttcgtcaagt tgaaaatcaa tagaaacagc ttgtttgtat agacaatcac
     1681 tggttacaca ttctgtatta aacggaatat cttcaatata ctcttcatct tcaaaattaa
     1741 attctgcgag attttgttct gatataatat tagtaaaaac ttcatttgtg ttaaaaggaa
     1801 tatcatcaat atatttttct tctgtaaagt taaatactga agcgttgaga tttaatgaaa
     1861 atagtattgt tagtgtaaca attagcgagg tggtttttac tagagttttc attttcttaa
     1921 ttttaaagta attaattatc agcaaaaata aatgtagata tactatctgg aaatgattat
     1981 taggtgaatg gcgttgatta ttcggtgagt ggtggatttt tactattcac ccaattatta
     2041 atgattactt ttgttatcaa attgattgcg gatgtcaaaa aagttatcga agaatattga
     2101 ttattttgaa gaatatcaca ttcttgccat tgtaagtcat ttaaaggatt acaatttgtg
     2161 ctatcacata aacctcgacc tagcacttga tttagtcaaa tatgaagact tgatttttgc
     2221 tcttccttct gttgaagaaa gtagcttttc gtggtactat tttgcagata aggtaagtcg
     2281 tacattctat tatttaatcg gtaataaagg agaaaatagc aacttaatat catcacaaaa
     2341 gactgttgat tatttttttc ttattaaaaa tcctgtaaat tatcagttaa taaaatctat
     2401 tgcaagcagg cttaggacaa taccaaacat tactgctgtt tttgatttta atattaggca
     2461 attcaaggat atggacctcc tgctcgaaac caatgaacta catgaattgg agtatattaa
     2521 tagacgtctc tctaaagata gtttgtagtg aaagaaacaa atcaaatcaa aattcgttaa
     2581 cgtttaaatg aaactattat ctaatcttca gcactacatt gggtattatg atgaggtaca
     2641 acttttcaat aaactcagag ttattggtaa aaaaataggg tcgcaagtta tctactatgt
     2701 gctcattatg tatatgttga taagcgattc aaagatacct ataaagataa ggttagtatt
     2761 tatggcagct ttaggatatt tgatacttcc tacggatttg gttgcagatt taattcctgc
     2821 tattggattt actgatgata ttgcattttt aacctatgct ataagtaatg cccaggaata
     2881 tattactccc gaagttagaa atcgcgcaaa agaaaaatta gggcaatgga ttagtgatga
     2941 tgcagaagat gccgatattg ttgatgtata gattctatat cgatgatttg aactgctcaa
     3001 gaaatcgtac atcattttca aaaaataaac gtaggtcgct tatttgatat ttgagcattg
     3061 ttattcgttc tatacccatt ccaaaggcaa accccgtata ttctttacta tttattttac
     3121 aagaatcaag aacgttagga tcaaccatac cacagcccaa tatttcaacc cagcctgtat
     3181 atttacaaat attgcaacct ttgccaccac aaatattgca agatatatcc atttcggctg
     3241 aaggttcagt aaatggaaag taagaagggc gaaacctcgt ttttgtttcc tcgccaaaca
     3301 gttcttttgc aaaatagtaa agggtttgtt taagatcgac aaatgataca tctgtgtcaa
     3361 tatat
//
LOCUS       DASCQP010000538         3178 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001951366, whole genome shotgun sequence.
ACCESSION   DASCQP010000538 DASCQP010000000
VERSION     DASCQP010000538.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3178)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3178)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3178
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001951366"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            268..1554
                     /locus_tag="QF480_09200"
     CDS             268..1554
                     /locus_tag="QF480_09200"
                     /inference="COORDINATES: protein motif:HMM:NF025875.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HJN06778.1"
                     /translation="MASKKNENLPIFIKKYFNHRYELFDNLQTMIINNNNRNNVLKHR
                     KFVVSGLLTLFLLVSSVSISQTSEDEKNFQQCKACHTIGGGKLVGPDLKGITARRDEA
                     WLISFIQSSQKMIQSGDEQAVKVFNDNLNIPMPDNNLTDDQVKGILLFIDNDGKLAEG
                     EIAEAGIQADSATAVHSDKDFAELIVEMKRDETRNMRSVFVIMVLLIIISITDLILFK
                     IVKAKWIHYVIVLIAVIIVSEIVVVEAIGLGRQQYYQPDQPIQFSHKVHAGQNQIDCQ
                     YCHYTANTSMHAGIPPVETCMNCHKLVKEGKQTGTKEIAKIYTAIENNKPIEWVKVYN
                     LPDHVYFNHAQHVAVGKMDCAKCHGEVNQMDQIIQESNLSMGWCIECHRTESVQFVSN
                     KFFEQYTKLHEKLKSGEITDVTVQNIGGDECAKCHY"
     gene            1590..>3178
                     /locus_tag="QF480_09205"
     CDS             1590..>3178
                     /locus_tag="QF480_09205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06779.1"
                     /translation="MDKLYWQSIENFKEQKNKAVLDNKEPVPEFSIEGLHESEIAGKS
                     GRRDFLKLLGFSVSAVALVSSCQMPVRKAIPLLNQPEDLVPGVANYYASTFFDGNDYC
                     SILVKTREGRPIKIEGNDLSALTKGGTNARVQASVLNLYDDARLRNPYILGGKSDWET
                     IDNEITARLSELSQSGKKVVLLTSTIISPATNKLIKEFLAAYPNIEWVTYDPVSFAAL
                     REANKLNFGKYVIPSYSFDKANIIAGFNADFLGNWLMPVSFSKQYSANRKLNKDKPRM
                     SRSYQFESRMSLTGANADYRYGIRPSEEATVLLNLYNEIAKSTGMSTFNVPSSPVDIS
                     KVAYDLLANQGSSLVVSGTNNLNIQLIVNAINNALGNYGSTIDLNTPINLKQGSDVLM
                     DNLVQEMNSGKIDGIMIHNANPAYDYAAATDFISGMEKVDTRISFSDTMDETSRECEF
                     VCTNNNFLESWDDAEPVKGSLSITQPAIRPIFNTRQFQDSLLKWMGSKDDFSTYLETY
                     WNGILAKDKNISDNIKENWKK"
BASE COUNT         1116 a          505 c          592 g          965 t
ORIGIN      
        1 aaaaacctgg ctgccaaaaa ataggaaatt aatcaggtta gtaacaattg tgtctgggat
       61 atacatccca cgtgagttca actttatata tcatcaatat ctaagcaaaa attatattgt
      121 ttcagacgga ttttttctac acaaaggttc ttaatgatta gtgttaaaca aaataaattg
      181 agtaaaaaaa ttgataatca ggaacatata attaatttaa gtatttagtt acttaaaggt
      241 tataattagt ttaaaaaatg aatacttttg gcatccaaaa aaaatgaaaa tttacctata
      301 tttatcaaaa aatattttaa tcatagatat gagttatttg ataatcttca aaccatgata
      361 attaacaata ataatcgcaa taacgttttg aaacacagga agtttgttgt tagtgggctt
      421 cttactctat ttctactggt ttcttctgtt tcaatctctc aaacatctga agatgaaaag
      481 aacttccagc aatgtaaagc ctgtcatact attggtggag ggaaacttgt tggacctgat
      541 ctgaaaggaa taaccgctcg aagagatgaa gcttggttaa ttagtttcat tcagagctcg
      601 cagaagatga tacagtctgg tgatgagcag gctgttaaag tgttcaatga taatctgaat
      661 attccaatgc ctgataataa tcttactgat gatcaagtta aaggaatact actgtttatt
      721 gacaacgatg gtaaactggc tgaaggggag atcgctgagg ctgggataca agcagattct
      781 gcaacagcag tacatagtga taaagatttt gctgagctta tagttgagat gaaaagggat
      841 gaaacccgca atatgcgaag cgtattcgtt attatggtgc tattgataat cataagcatt
      901 actgatctaa tcctttttaa aatagtaaaa gcaaaatgga tacattatgt tattgtgtta
      961 attgcggtta taattgttag tgaaattgta gttgttgagg cgattggtct tggcagacaa
     1021 caatactatc aacctgatca acctattcag ttttcacata aagtacatgc cggccaaaat
     1081 caaatagatt gccaatattg tcattataca gccaatacaa gtatgcatgc aggtattcca
     1141 ccagttgaaa cctgtatgaa ttgtcataaa ctagtaaaag aaggtaaaca aaccggtact
     1201 aaagagattg ctaaaattta taccgcaatc gaaaataata aaccaattga atgggttaaa
     1261 gtatataacc tccccgatca tgtttatttt aatcatgctc agcacgtagc tgttggcaaa
     1321 atggattgcg caaaatgtca tggtgaggtt aatcagatgg atcaaattat tcaggagtct
     1381 aatctaagta tggggtggtg tattgaatgc catcgtactg aatcagttca atttgtatca
     1441 aataaattct ttgaacaata cacaaaactt cacgaaaaat taaaaagtgg tgagattact
     1501 gatgttacag ttcaaaatat tggtggcgat gaatgcgcta aatgtcatta ttaatattat
     1561 tataactatc attccattta attaaaacta tggataaatt atactggcaa agtattgaaa
     1621 acttcaagga acagaaaaac aaagctgtac tggataacaa agaacctgtc cctgaatttt
     1681 caattgaagg cctccatgaa tcggaaatag ccggtaaatc cggaaggaga gatttcctaa
     1741 aactgcttgg tttttctgta agtgcagtag cacttgtatc cagctgtcaa atgcctgtac
     1801 gtaaagcaat accattactt aatcaaccag aagatttagt acccggtgtg gcaaactatt
     1861 atgcatctac ttttttcgat ggaaatgatt attgcagcat acttgttaaa acccgtgaag
     1921 gcagacctat taaaatagaa ggaaatgatt tgtcagcttt aacaaaggga ggaacaaatg
     1981 caagagtaca ggcatcggta cttaatttgt acgatgatgc acgactacgt aatccttata
     2041 ttcttggtgg gaaatccgac tgggaaacaa ttgacaatga aataactgct agattatccg
     2101 aactaagtca atcaggtaaa aaagttgtac tgctcacatc cactataatc agtcctgcta
     2161 ctaataaatt aattaaagag tttttagctg catatcctaa cattgaatgg gtaacgtatg
     2221 atccggtaag ttttgctgct ctaagagaag ctaacaagct taattttgga aaatatgtga
     2281 ttccctccta ctctttcgac aaagcaaata ttattgcagg ctttaatgcc gatttcttgg
     2341 gtaattggtt gatgcctgtt tctttttcga aacaatattc tgcgaataga aagttaaata
     2401 aagataagcc tcgtatgtca agaagctatc agtttgaaag caggatgtcg ctcacaggtg
     2461 ctaatgcaga ttacagatat gggataagac catctgaaga agctacggta ctccttaacc
     2521 tttacaacga aatagcaaaa tctacaggca tgtcaacctt taatgttcca tcttcaccgg
     2581 tggatatttc taaggttgct tatgatcttc ttgcaaacca gggtagctca cttgttgttt
     2641 caggcactaa caatcttaac atccagctta ttgtaaacgc tataaataac gctcttggca
     2701 attacggaag cactattgat ctaaatactc ctataaattt aaaacaagga agtgatgtat
     2761 taatggataa ccttgttcag gaaatgaatt cgggtaagat tgatggtata atgatacata
     2821 atgctaaccc tgcttacgac tatgcagctg ccacagactt catttccgga atggaaaaag
     2881 tagatacaag gatttccttt tctgatacca tggatgaaac atcacgtgaa tgtgaatttg
     2941 tatgcaccaa caataatttt cttgaatcat gggacgatgc tgaacctgtt aaaggatcac
     3001 taagcattac ccaacctgca atcagaccta tttttaatac aaggcagttt caggatagtt
     3061 tattaaaatg gatgggaagc aaagatgatt tttcaaccta tcttgaaacg tattggaatg
     3121 ggatattagc aaaggataaa aatatttctg ataatattaa ggaaaactgg aagaagaa
//
LOCUS       DASCQP010000539         9300 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001953009, whole genome shotgun sequence.
ACCESSION   DASCQP010000539 DASCQP010000000
VERSION     DASCQP010000539.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 9300)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9300)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9300
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001953009"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..184
                     /locus_tag="QF480_09210"
     CDS             <1..184
                     /locus_tag="QF480_09210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06780.1"
                     /translation="EWAKADSVLAAGGSVDYDGVSGAIEFDDNGDIGSATFGIYYMKN
                     PAGALEPDTVISFSTR"
     gene            377..955
                     /locus_tag="QF480_09215"
     CDS             377..955
                     /locus_tag="QF480_09215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HJN06781.1"
                     /translation="MLLIKQLISWGLQYLLALFILCHVTCFCQSQHPEKANPDSSFVP
                     VHFERIHSVIIEANADTVFDLLGPRGLRLMSNIEVDFLYGTEDELEGALFRILRNNNW
                     IYYAIGEHDTEERIYRSIIFMPESELWINEYHVESLGDGKSKLTVHWRITGYHKNSNE
                     EIQEYVDYDLQNDLFNKSVVKTGKKIENYLND"
     gene            complement(999..3389)
                     /locus_tag="QF480_09220"
     CDS             complement(999..3389)
                     /locus_tag="QF480_09220"
                     /inference="COORDINATES: protein motif:HMM:NF024583.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HJN06782.1"
                     /translation="MSPHKQHPVIKEFPFQQTLSLVPLIIYWKKKTKSKNLIEASIAQ
                     NIIKNLNNSFELFDNISNHSVIEKNKSLIEAMLTALISPYQMEHDLFGISMPYLFELY
                     YSTSGVEAIFGKYGKSFMEDLFRSKKEEINYYGPTLHAYGRILKENYGADTQFTIPLM
                     KINKFDEKLKIVRSYEMFVDHSFVNIEPRKKLKKLSEKQIIELSNNFYDLDLWFKTLP
                     PDNFEMRGFAINYIAEVTQQQSISSLKDNLLDKDAIISKTHFAKLERRMRSLLKLPDL
                     RLGIAIFTLEGTKFLDYLRTWQSIMPKPELLCDCFPESAYEQAVKNERPCIISDLENH
                     PNPTKIELSLIEAGFKCLIIAPLHFEDKLVGVLELASKNKNDLNPLSNIKIFETLPLF
                     ANAANRVTLDMDNQIKAKIQEEFTAIHPIVEWRFIEEASGLLRKERGDEDFEKDPIIF
                     NNVYPLFGAADIRSSSHERNKAILIDLSEQLHNADDVLKYIYNLKKLPVINQIRHEIS
                     IQLKTLNKGLTAGDEMRIIDFVKREVEPVFTHLKDTDPNLKKIITDYEKKNDPEQGIL
                     YKRRNDFETSLEMINDSITTIIDDQESSAQDMFPHYFEKYRTDGIEYNIYVGQSLLEN
                     EKFDPIYLKNLRLWQLIVTCQIGRKITELKSKLPIPLEITQLILVHSNSLSIKFREDE
                     KKFDVEGGYNIRYEITKKRIDKAVIKGTNERITKPGSIAIIYSQHEELLEYQKYIDYL
                     ISINYLTNKFESYELEDMQGVYGLKALRVEINLKGKEVKDLDNMEKIAIEAMKIEI"
     gene            complement(3522..4544)
                     /locus_tag="QF480_09225"
     CDS             complement(3522..4544)
                     /locus_tag="QF480_09225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06783.1"
                     /translation="MKTSHIVFSLLISMIFIYSCREINVSTVINKNGSFTRIITITGD
                     STDVLKPDLPYPINDTWKREFKKDTTNDKNYILTYTKFFSNNSLLNTEISEDTGWRKK
                     LNRIILVENEFGFFYSYLSYKEKITAANPFHEYDYKDYLNKEDMLWLTGKKLALNSND
                     SAKIKEAENKVDDYLQNAITDEIIAILKTGIEKLNNPAIKADQVDSYRDSIETKINEW
                     SDKSTLEFVDFYSSWTHNSEINKLKQIESSQFKNLDKKMQLLMEMLGMEDYKVSVELP
                     GIITETNSLSTMGNKVSWHVTPLSILLEDFNMIVESRVINGWMFVITGIVLLLFIVLT
                     IIKSRK"
     gene            complement(4569..5183)
                     /locus_tag="QF480_09230"
     CDS             complement(4569..5183)
                     /locus_tag="QF480_09230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06784.1"
                     /translation="MKCERIKQKIDELIFENNEMFAKEDTNHITNCNSCRSYLDESIS
                     ANSTLEQMKKEPKLHNPDELTNNILSIIENVDQIPRAKIKNNYKIIRLARRSLAVASV
                     GLILIFGIEQYIVFDKIQKLEDTTSKIANEQINISFQNVILYNTGMQIESFKEILNKE
                     PNKQFHRKIKIRIILARLSALSINEIDNLRIRQLRQAFATMKSN"
     gene            complement(5180..5749)
                     /locus_tag="QF480_09235"
     CDS             complement(5180..5749)
                     /locus_tag="QF480_09235"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HJN06785.1"
                     /translation="MPVEYKIFIDKARNGDKEAFGHLVKAHQQYAFNLAFRIVCNEEE
                     ARDVVQDSFIKIWKNIKLYNPDIKFTTWMYNIVTNTAIDYLRATKKVDLVNIDDFHEK
                     LTKVSTDNPETKLYNQEIGQLIHSISDTLPEKQRLVFVLRDLQGMNSAETSDVLDLSI
                     TSVKSNLYLARRVIKEKLLKILSYEGRTI"
     gene            5972..8149
                     /gene="rnr"
                     /locus_tag="QF480_09240"
     CDS             5972..8149
                     /gene="rnr"
                     /locus_tag="QF480_09240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013445938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008997 - ribonuclease R activity
                     [Evidence IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HJN06786.1"
                     /translation="MKKKNRTKKPKSALIGIILSIFAENPFKAYNYKQIGHLIGVKDK
                     AGRDLLLNILDELTEAEDLNEVRKGKYLLNPKKLKELANKKKYITGTVDMKKTGKAYI
                     ISDEGGDDIFIASNNVGHALNDDLVKVLIFPKRKSHKTEGQIIEVLERTKDTYVGVLE
                     MSKNFGFVVTDNQSMPYDIFVAKSKIKNALNGQKVLVKITEWPEQSNNPFGEIIEVLG
                     APGNNDVEMKSILADYNFPLSFPDKVEIDADKINTTISASEIKKRKDFRKTLTITIDP
                     LDAKDFDDAISLKKLGNGNYELGVHIADVSHYVTPGTALDDEALKRATSVYLVDRVIP
                     MLPEVLSNNVCSLRPKEDKLSFSAVFTMNNKAEVLDEWFGKTIINSNRRFTYEEAQDI
                     IETGKGEYSEEINIINALATILREKRFKNGSINFSSEEVKFKLDDTGKPIETYVKEQK
                     EANHLVEEFMLLANKKVAELIGKPETQNPCLAGRQAKPKTFVYRIHDEPNPEKLNTFV
                     QFLKKLGYGLNVSSRQALASSYNSLFKKIHGKGEEHMIETIAIRTMAKAEYSTDNIGH
                     YGLAFPYYTHFTSPIRRYPDLMVHRLLERYLSGGKSVQKDAYEEMCKHSSEMERKATQ
                     AERDSVKYKQVEFLLDKKGKVFEGVISGVSKWGIFVELSISKSEGLIRFNDFKDDYYY
                     LDEDNYQIIGRQSDNKYRLGDKVNVLVKKVDLEKKQLDFVIVD"
     gene            complement(8205..8453)
                     /locus_tag="QF480_09245"
     CDS             complement(8205..8453)
                     /locus_tag="QF480_09245"
                     /inference="COORDINATES: protein motif:HMM:TIGR03833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YwbE family protein"
                     /protein_id="HJN06787.1"
                     /translation="MEITEYKLQKRVSISKEIRREIEVGMLVRIILKRDQRSGILAEG
                     VVNKILTKSSNHPHGIKVRLEDGQIGRVKEIVESIDEL"
     gene            complement(8537..9166)
                     /locus_tag="QF480_09250"
     CDS             complement(8537..9166)
                     /locus_tag="QF480_09250"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HJN06788.1"
                     /translation="MSVLEIGGAPGQYLAYFHKEFGYIISCLDYSEIGCEKTRENFDL
                     LKIPGKVYQGDLFSEDHQLPLFDIVYSLGFIEHFTNLTDIVGKHIQLLKPGGILLLGI
                     PNLLGINHWFLKRLAPNLLTGHNLASMDIHRWNSFESYFDLEVIFKNYVGGFEPAVFL
                     KNERKPVLNKLLFFVARLLNRIFHSNFNCLRKYNSKFTSGYLMGIYKKP"
BASE COUNT         2990 a         1562 c         1552 g         3196 t
ORIGIN      
        1 agaatgggct aaagcagaca gtgtattggc tgcaggaggg agtgttgact atgatggagt
       61 atcgggagca atagagtttg atgataatgg tgatataggg agtgcaacat tcggtatcta
      121 ttacatgaaa aatcctgccg gagcacttga gccggatacg gttatatctt tttcaacacg
      181 gtagaataac ggggttatga acagatacaa cagctgagag tcgtggaaca ggttatgggt
      241 aaattgtgta ctcattttta gttcgttgta atgtgtctgg aatcatatgc acaggctccg
      301 gcaataatat tatgcaatag tactaatatc tattattttt gatatcaaag aaatacaata
      361 aaaaaggggg gaaattatgt tactaattaa acaactcatt tcatggggat tacaatatct
      421 gctcgcatta tttatattat gtcatgttac atgtttttgt caaagccaac atcctgagaa
      481 agctaatccc gattcttcat ttgtgcctgt acattttgaa agaattcact ccgtcataat
      541 tgaggccaat gcagacactg tttttgattt attggggcca cgcggtttaa gattaatgag
      601 taatatcgaa gtagattttc tttacggtac agaagatgaa ttagaagggg ccctattccg
      661 aatattacga aataacaact ggatatacta tgcaattggt gaacacgata ccgaagaaag
      721 aatttacaga tcaattatct ttatgcctga aagcgaactc tggataaatg aatatcatgt
      781 agagtcttta ggagacggta agtcaaaact aacagttcat tggagaatta cgggttatca
      841 taagaattca aatgaagaaa ttcaagagta tgttgattac gatttacaaa atgacctatt
      901 caataaatct gttgtcaaaa caggtaagaa aatagagaat tatcttaatg attaatggtt
      961 attggctaat gaatataaca ggtctataat ttttcagttt aaatctcaat tttcattgcc
     1021 tcaattgcaa ttttctccat attgtcaagg tcttttactt ccttcccctt gagatttatt
     1081 tcaacacgta atgcttttaa accatatact ccctgcatat cttcaagctc ataactctca
     1141 aacttattgg ttaaataatt aattgaaatt aagtaatcta tatatttctg atattctaat
     1201 aattcctcat gttgagaata aatgattgct atacttcctg gtttggtaat gcgttcatta
     1261 gttcccttta ttacagcttt atcaatacgt ttctttgtta tctcgtatct tatattatac
     1321 ccaccttcaa catcgaattt cttttcatcc tctctaaatt taatggacaa tgaattgctg
     1381 tgaactaata ttaattgagt tatttctaac ggtattggta acttactttt caattcagtt
     1441 attttacgac cgatttgaca ggtcacaatt aattgccata aacgcaagtt tttaagataa
     1501 atagggtcga atttttcatt ttctaataat gattgaccta cataaatatt atattcaata
     1561 ccatctgtgc gatatttttc aaaataatgc gggaacatat cctgggcact actctcttgg
     1621 tcatcaataa tagtagtaat agaatcattg atcatttcaa ggctcgtttc aaaatcgttg
     1681 cgtctcttat acagtatccc ttgttcagga tcattctttt tttcataatc tgtgatgatc
     1741 ttctttagat tagggtctgt atccttcaag tgagtaaaca caggctccac ttctctcttt
     1801 acaaaatcaa taattcgcat ttcatcgcca gccgttaaac ccttgtttag agtctttagt
     1861 tgaattgaga tttcgtgtct gatttggttt attactggca gttttttcaa attataaata
     1921 tatttcagaa catcatctgc attgtgtaat tgctcagaaa gatcaatcaa tattgcttta
     1981 tttctttcat gtgaggaaga acggatatcg gctgctccaa aaaggggata tacattattg
     2041 aatattatcg gatctttctc aaaatcttca tcacctcttt cttttcgcag caatcctgaa
     2101 gcctcttcaa taaagcgcca ttctacaata gggtgtattg cggtgaattc ctcctgaatt
     2161 ttggctttta tttggttgtc catatcaaga gtaactctgt ttgcagcatt tgcgaataat
     2221 ggtaaggttt caaatatttt aatgttcgaa agtggattaa gatcgttttt attcttagat
     2281 gcgagctcta acacacctac taacttgtct tcaaaatgta ggggggctat tattaagcat
     2341 ttgaagccgg cttctataag cgaaagttca attttagtag gattgggatg attttccaga
     2401 tcactaataa tgcacggcct ttcattcttt acagcttgct cataagccga ttcaggaaaa
     2461 cagtcacata aaagttcggg ctttggcatt atactttgcc atgttcttaa ataatctagg
     2521 aatttagtgc cttcaagggt aaaaatggca atacccaacc ttaagtcagg taattttaat
     2581 agtgagcgca ttctacgctc cagtttagca aaatgagttt tggatataat tgcatcctta
     2641 tctagtaaat tgtcttttag agatgagata gattgctgtt gagtaacttc tgcaatataa
     2701 ttaattgcaa atcctctcat ttcaaagttg tcaggaggca gggttttgaa ccatagatca
     2761 aggtcataaa aattattact taattcaata atttgttttt cactaagttt cttaagtttt
     2821 tttctgggtt cgatattaac aaaactatga tctacaaaca tttcataaga gcgaacaatc
     2881 ttcaatttct cgtcaaattt attaatcttc ataagaggaa ttgtaaattg agtatcagcc
     2941 ccgtagtttt ctttgagaat tcttccgtat gcatgcaggg ttggcccata gtaatttatt
     3001 tcttcttttt tacttctgaa tagatcctcc ataaaagatt tgccatattt cccaaatatc
     3061 gcctcgacgc ctgatgtaga atagtataac tcaaataaat atggcatcga aattccaaaa
     3121 aggtcatgct ccatttggta aggtgaaatc agggctgtta acatcgcctc tatgagagac
     3181 ttgttttttt cgataacaga atgattagaa atattatcga aaagttcgaa tgaattattc
     3241 aggtttttta tgatattttg cgcgattgag gcctctatta aattcttgga ttttgttttc
     3301 ttcttccagt atataattag tggtacaaga cttaacgttt gttgaaaagg aaattcctta
     3361 attaccgggt gttgtttgtg cgggctcatt agtagttatt tacattataa ttctttgagt
     3421 aaaagtacaa agattattac atttaagata actcaaaatc attgacagtg aaattgaccc
     3481 attgataagg attattatta ctgctttttc cggttagtaa gctactttct tgatttaatt
     3541 atcgttaaaa caataaataa caatagaact attcctgtaa ttacaaacat ccagccattt
     3601 ataaccctgg attctacaat catattaaag tcttctaata gtatggataa aggggttaca
     3661 tgccaagaca ccttgttccc catagtcgaa agtgaatttg tttctgtaat tatacctggt
     3721 aattcaacgc tcactttata atcttccatt ccaagcattt ccattaaaag ttgcattttt
     3781 ttatccaggt ttttaaattg agaactctcg atttgcttta gtttattaat ctcagaatta
     3841 tgagtccaac ttgaatagaa atcaacaaac tcaagagtag atttatcact ccattcatta
     3901 attttcgtct cgatactatc tctataacta tcaacctgat cagccttaat agcagggttg
     3961 ttcagttttt cgatccccgt ttttagtatg gcaataatct cgtctgtaat agcattttgt
     4021 aaataatcat ctactttatt ttcagcttct ttaatttttg cagaatcatt gctattcagg
     4081 gccagttttt tccctgttaa ccatagcatg tcctccttat tgagataatc cttataatca
     4141 tattcgtgaa aaggatttgc agcagttatc ttctctttgt atgaaagata agaatagaaa
     4201 aaaccaaatt cattttcgac aagtataatc ctattcagtt tctttctcca tccagtatct
     4261 tcactaattt cagtatttag aagagagtta ttactaaaaa atttagtgta ggtaagaata
     4321 taatttttat cattagttgt gtctttctta aattcccttt tccatgtatc atttattgga
     4381 tatggcaaat cgggctttaa tacatctgtt gaatcccctg taattgtaat aattcgtgta
     4441 aatgaaccat tcttatttat tactgtgcta acatttattt ccctgcagct gtaaataaat
     4501 atcattgaga ttaataaact aaatactata tgtgatgttt tcatgactac tgatttaaat
     4561 ttgaactgtt aattactttt cattgtggca aaggcttgac gtaattgtct tattctcaag
     4621 ttatctattt catttataga taaagctgat aatcgtgcta gtattatcct gattttaatc
     4681 tttcggtgaa actgcttatt tggttcttta tttaatattt ccttaaatga ttcaatctgc
     4741 ataccggtat tataaagtat tacattttga aagcttatat ttatttgttc atttgctatt
     4801 ttggaagtag tatcttccaa tttttgaatt ttatcgaaaa ctatatattg ttcaattcca
     4861 aaaattagta tcaaaccaac tgatgcaaca gctaatgatc ttcttgccag acgtatgatt
     4921 ttataattat tcttgatttt tgctcttgga atttgatcaa cattttcaat aattgataat
     4981 atgttatttg ttagttcatc agggttatga agttttggtt cctttttcat ttgttcaagc
     5041 gtactattgg ccgatatgct ttcatctaaa tatgatcgac atgaattgca gttagtaata
     5101 tggttggtat cttctttagc gaacatttca ttattttcaa aaatcaactc gtcgattttt
     5161 tgttttatcc gttcacattt catattgtcc tcccttcata ggataaaatt tttagtagct
     5221 tttctttaat caccctcctg gcaagataaa ggttactttt tactgatgtt attgataagt
     5281 ccaacacatc actagtctca gccgaattca tcccttgtag atctcttaat acaaatacaa
     5341 gtctttgctt ttcagggaga gtgtcggata ttgagtgtat cagttgccct atttcctgat
     5401 tgtacagttt ggtctccgga ttatctgttg atactttagt aagtttttca tgaaaatcat
     5461 caatgtttac tagatctact tttttagtgg ctcgcagata atcaattgcg gtatttgtta
     5521 cgatgttata catccatgtt gtaaacttaa tatcagggtt ataaagcttt atattcttcc
     5581 atatctttat aaaactgtcc tgaaccacgt cccttgcctc ttcctcattg catacaattc
     5641 tgaatgcaag attgaaagca tattgctgat gcgccttaac caagtgccca aatgcttctt
     5701 tatctccatt tctggcttta tcgataaaga ttttatattc aaccggcatt agcaaaattt
     5761 gcgttcatgt aattgatacg atgcaaatac aaaaaagtaa aattgtgtag tcaagtaatt
     5821 tggagttcta aatttttgaa caaactcaac attgccaaaa tattagtact tttgcagcat
     5881 atttgaacat tacccctcca caaattaatt ttacaaacaa aacattagaa acaagtttga
     5941 tcagctttga gctgacaaaa aataatataa tatgaaaaag aaaaatagaa caaaaaaacc
     6001 aaaaagcgca ttaatcggta tcattctcag catttttgct gaaaatcctt ttaaagcata
     6061 taattacaaa caaataggcc atttaattgg cgtaaaagac aaggcaggta gagatttact
     6121 actaaacatt cttgatgaat taacagaggc tgaagaccta aatgaggtca gaaaaggaaa
     6181 atacctttta aacccaaaga aacttaagga gcttgccaac aaaaagaaat atataaccgg
     6241 tactgtcgac atgaaaaaga ccggcaaggc atatattatc tccgatgaag gaggtgatga
     6301 tatttttatt gcctctaata atgttggtca tgcgttaaac gacgatctgg taaaagtgct
     6361 catttttcct aaaagaaaaa gtcataaaac tgaaggccaa ataattgaag tattagaaag
     6421 aacaaaagac acatacgttg gtgtattgga aatgagtaag aatttcggtt ttgttgtaac
     6481 tgacaatcag tcaatgccct atgatatttt tgtggcaaaa agcaaaatta aaaacgctct
     6541 caatggccaa aaagtgcttg taaaaattac tgaatggcca gaacaatcta acaacccttt
     6601 tggagaaatt atagaggtgc tgggcgctcc gggaaataat gatgttgaaa tgaaatccat
     6661 actagcggat tataatttcc cattgtcatt tcctgataaa gttgaaatag atgctgacaa
     6721 aatcaatact acgatatctg catccgaaat taaaaaacgt aaagatttta gaaaaactct
     6781 aacaataacg atagacccac ttgatgcaaa agactttgat gatgcaattt cattaaaaaa
     6841 acttggaaat ggcaattatg aactgggtgt tcacattgct gatgtaagtc attatgtaac
     6901 tccgggaaca gcactagatg atgaagcctt aaagcgcgca acatcagttt atcttgtaga
     6961 tcgtgtaatc ccaatgcttc ccgaagtgct ttccaataat gtatgttccc tccgtccaaa
     7021 agaagacaag ctttcatttt cagctgtttt cacaatgaat aacaaagcag aagtgttgga
     7081 tgagtggttt gggaaaacta ttataaattc caacagacgt tttacttatg aagaggctca
     7141 agatattatt gaaacaggga aaggtgaata ctctgaagag ataaatataa ttaacgctct
     7201 tgcaacgatc cttcgcgaaa agcgatttaa aaacggctca attaatttta gttcagaaga
     7261 ggttaagttt aaacttgacg acacgggaaa accaattgag acatatgtaa aagagcagaa
     7321 agaggcaaat catcttgtag aagaatttat gttactggcg aacaaaaaag tcgcagaatt
     7381 aattggcaaa ccagagactc aaaacccctg cctcgccggc aggcaggcga aacccaaaac
     7441 ttttgtttat cgtattcacg atgagcctaa ccctgagaag cttaatactt tcgttcagtt
     7501 tttgaaaaaa cttggttatg gattaaatgt tagttcccgt caggcactgg caagttctta
     7561 taatagcctg ttcaaaaaaa ttcacggaaa aggtgaagag catatgatcg agaccattgc
     7621 aattcgaaca atggccaagg cagaatattc aactgacaat attggccatt atggattggc
     7681 tttcccttac tatacacatt ttacttctcc cataaggcga tatcctgatt taatggttca
     7741 ccgacttctt gaaagatatt tgtcaggagg aaaatccgtt caaaaagatg cttacgaaga
     7801 aatgtgcaag cattcatcgg aaatggaacg caaggcaaca caagctgagc gtgattcggt
     7861 aaaatacaaa caggttgaat ttttacttga caaaaaagga aaggtatttg agggagttat
     7921 ttcaggagtg agtaaatggg gaatatttgt tgagctctca atttcaaaaa gtgaaggatt
     7981 aattcgcttt aacgacttta aagatgatta ttactatctt gatgaggata attaccagat
     8041 aattggccgg caatcagata acaaataccg acttggcgat aaggtaaatg tactagttaa
     8101 aaaggtagat ctggagaaaa aacagcttga ttttgtgatc gtagattaag gggtgaaatg
     8161 ttgaatgtta agttttaaat gttgtatgaa gagagcttca aaatttacaa ttcatcaatc
     8221 gattcaacaa tctccttaac tcttccaatc tggccatcct caaggcgtac tttaatacca
     8281 tgtggatgat ttgatgattt ggtaagaatc ttatttacaa caccttcggc aagaattcca
     8341 ctgcgctggt ccctttttaa tattatccgg acaagcatac cgacttcaat ttcccttctg
     8401 atttcttttg aaatggatac tcgtttctga agtttgtatt ctgttatttc catagtattt
     8461 gtttaatcgt caattacctt gaattagaat tcattataaa tacccattat taattatttt
     8521 gcactagtat agctatttat ggcttcttat aaattcccat caagtagcca ctggtaaatt
     8581 ttgagttgta ttttcgaagg cagttaaagt tgctgtggaa aattcggttt agaagtctgg
     8641 caacgaaaaa caacaattta ttcaatacag gttttcgttc gttcttcaaa aatacagcag
     8701 gctcgaatcc tccaacataa tttttaaata ttacctctaa atcaaaataa ctttcaaaac
     8761 tattccagcg atgtatatcc atgctagcta agttatgccc agtcagcaaa ttaggggcaa
     8821 gtctttttaa aaaccaatga tttatgccaa gcaaattggg tataccaagt aataatattc
     8881 ctcctggttt taatagctga atatgtttgc caactatatc tgtcaagttt gtgaagtgtt
     8941 ctataaatcc caaggaatat acgatatcga acaagggtaa ttgatgatct tctgaaaaaa
     9001 gatctccctg gtaaactttt cctgggattt ttaataaatc gaaattctcc cgtgtttttt
     9061 cacagccaat ttctgaataa tcaagacaac ttattatata tccaaactct ttatgaaaat
     9121 aagctaaata ctgtccgggt gcccctccaa tttccagtac cgacaacttt tttttggaag
     9181 aagacgctca aaaatatcca attcagctac aatattgggg gagcgattat cacgtttaac
     9241 ttcctgcggt aatgcaatac cattccagta ctcatcccag tattgcttat ctgttaattt
//
LOCUS       DASCQP010000540         2155 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001954563, whole genome shotgun sequence.
ACCESSION   DASCQP010000540 DASCQP010000000
VERSION     DASCQP010000540.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2155)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2155)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2155
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001954563"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..612
                     /locus_tag="QF480_09255"
     CDS             <1..612
                     /locus_tag="QF480_09255"
                     /inference="COORDINATES: protein motif:HMM:NF024978.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4136 domain-containing protein"
                     /protein_id="HJN06789.1"
                     /translation="MKKLTLIALMAVLMVMSSCSSLTFSYDYDKSIDFTKFKTYSYYG
                     WADNSGEILSPFDKERIEQSFGNEFKERGLTFQKEGGDLTVVLYIVTKQQQQTTATTT
                     GMGGMYNGYGGYGGFYGYGPGWGWGGGMQTTTFNTYDYTVGTLVCDVFDTHEKKLIWE
                     GVGKGTVDSNPQERTKRIPMIVDKIMANYPVKPISTKVWRRAR"
     gene            843..1475
                     /locus_tag="QF480_09260"
     CDS             843..1475
                     /locus_tag="QF480_09260"
                     /inference="COORDINATES: protein motif:HMM:NF022636.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2975 domain-containing protein"
                     /protein_id="HJN06790.1"
                     /translation="METIKKPLSIKVIYWITNITFWIYVAVTLLAFILVTVLLFSELD
                     TLQLHVGIPVKVNVIEEGSLDLNMLSSFANVKLVEMTGKVHFVDTPPEVGRVYSVIIF
                     SLVILILYIFIILKRFIGNVYNGLYFDMRNISLLKRISYALVIIWIYLVFYAYFQYYF
                     LVINMNFDTVEFTGDVQTYPVILLVALIIWVLSHIFMKGCELQEEHNSTI"
     gene            1480..1686
                     /locus_tag="QF480_09265"
     CDS             1480..1686
                     /locus_tag="QF480_09265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008146342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HJN06791.1"
                     /translation="MAIIVNLDVMLAKRKMSLTELSSRVGITMANLSILKKGKAKAIR
                     FSTLELICSTLDCQPADILEYKVE"
BASE COUNT          737 a          307 c          390 g          721 t
ORIGIN      
        1 atgaaaaaat taactttaat tgcattgatg gctgttttga tggtgatgag ttcatgctca
       61 tcccttacat tttcttacga ttacgacaaa tcgatagatt ttaccaagtt taaaacctat
      121 tcgtattatg gatgggcaga caacagcgga gaaatcttat ccccttttga caaagaacgt
      181 atcgaacaat cttttgggaa tgaatttaaa gagcgaggat taacatttca aaaagaaggt
      241 ggcgatctga ctgttgtact ttatattgtt accaagcaac aacaacaaac tacagctacc
      301 acaaccggaa tgggtggaat gtataatgga tatggtggtt atggaggatt ttatggttat
      361 ggtcccggtt ggggctgggg tggcggaatg caaaccacaa cttttaatac ttacgactac
      421 accgttggaa ctctggtttg tgatgttttt gacactcatg aaaagaaatt gatttgggaa
      481 ggtgttggaa agggaactgt tgatagtaat cctcaggaaa gaacaaaacg tattcctatg
      541 attgtggata aaattatggc aaattaccca gtgaagccta tttctacaaa agtatggagg
      601 agggcaagat aacaactaag tagttacaat aaaattattt tcaccccatc tggcaactta
      661 attatttact attagtatta agctggatgg gtttctctat ctacaattcc agaagtattt
      721 cctagtttta gttttcatag taattattga ttaacaattt atatttatcg ttttacgata
      781 tattttattt gttttttaat aatatttgtt tttactttgc aaagtaatta aaactaaata
      841 atatggaaac tattaaaaaa ccccttagca ttaaagtaat ctattggatt accaatatta
      901 cattttggat atatgttgct gttaccttac ttgcttttat acttgtaaca gtcttactat
      961 tctccgagtt agatactttg cagctgcatg ttggaatacc tgtaaaagta aacgttattg
     1021 aggaaggatc gctcgattta aacatgttga gctcattcgc taatgttaaa cttgttgaaa
     1081 tgacgggcaa agttcacttt gtagatacac cacctgaggt tggaagagtt tatagtgtta
     1141 ttatattctc actagtaatt ctaatccttt atatattcat aatacttaaa agatttattg
     1201 gcaatgttta taacggttta tattttgata tgagaaatat atcactcttg aaaagaatat
     1261 cctatgcctt ggtaattata tggatatatc tggtttttta cgcttatttc caatactatt
     1321 ttttggtaat aaatatgaat ttcgatactg tcgaattcac cggcgatgtt caaacctacc
     1381 ctgttatatt attagtagct ttaattattt gggtgctatc acatatattc atgaaaggat
     1441 gtgagctaca ggaagaacat aattcaacaa tatagggata tggctattat agtaaattta
     1501 gatgtaatgc tggccaaaag aaagatgagt ctgactgaac tttcaagcag agttggcata
     1561 actatggcta atttgtccat actaaaaaaa ggtaaagcaa aagcaattcg tttttccaca
     1621 ttagaattga tttgtagtac attagactgc caaccggcag atatacttga gtataaggta
     1681 gaatagctca caactgactt aaagtacttt agtatgaaaa gtcaattgag attagatata
     1741 atcaaaacta aagatatcga ttaacgaaca aggaattatg aatattgaat ttaaagaaca
     1801 aaggcatcta acgaactata aattagcttt aagcctactt cattattcaa aattcgttaa
     1861 tcggtgtttg atatttaatt gtaataatgt ttatagaagc tatagagaaa ttgcacagtg
     1921 catacctggc ggcaaacgca gggttctaac ttctgtataa accagattta acttaataga
     1981 tatgtcaaaa gaaaaagaag taaaagaata ttttgtaaaa aaaggactta aactggagtg
     2041 cgtaatatgc aagagccacc tgttttggac acgtactacc ttaatgaata caacaggaat
     2101 gtcaatcatt ggtcttgatt gggcgaataa acatgctaca aattatgttt gtaat
//
LOCUS       DASCQP010000541         2273 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001956461, whole genome shotgun sequence.
ACCESSION   DASCQP010000541 DASCQP010000000
VERSION     DASCQP010000541.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2273)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2273)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2273
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001956461"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..940
                     /locus_tag="QF480_09270"
     CDS             <1..940
                     /locus_tag="QF480_09270"
                     /inference="COORDINATES: protein motif:HMM:TIGR00374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase transmembrane
                     domain-containing protein"
                     /protein_id="HJN06792.1"
                     /translation="RKLDLLEIWYDIRDANYLWLIISLVFAIGAHIFRALRWNLLINS
                     LKYKTKLSTTFFAVMVGYLANTAVPRMGEFARCGVLSKKEKIPFNALFGTVISERIFD
                     LITLFVIILLVIIFQVKSLGDFLKQLFGPFFIELFSNLTSIIIFVGAILLTFVGLLFL
                     IKTLKEKIKKIPFYNKIWEFLSGLFDGIKTIMKLRQKWLFLIYTFIIWFFYALMVYLP
                     LLMLEETSHLTFVNGLTILAIGSLGIVAPVPGGIGAYHFIVKTVLYEIFKVGGNASGS
                     YAVITHTGQTLLNVVIGSLSYFYLGILAKREKPLNE"
     gene            933..1427
                     /gene="rfaE2"
                     /locus_tag="QF480_09275"
     CDS             933..1427
                     /gene="rfaE2"
                     /locus_tag="QF480_09275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018337873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1-phosphate
                     adenylyltransferase"
                     /protein_id="HJN06793.1"
                     /translation="MNSLTSISDKIYDNQSLDLKLKDWRSGNKKIVFTNGVFDLLHLG
                     HIDYLSKAKDNGDILFVGVNSDVSAKKLGKGSSRPITNEKSRSMIIAALEFVDAVMLF
                     DEDTPLELIKIVMPDILVKGGDYKLEDIVGYDVVMAKGGTIKTIDLLPGYSSTAIEQK
                     IKKH"
     gene            complement(1478..1834)
                     /locus_tag="QF480_09280"
     CDS             complement(1478..1834)
                     /locus_tag="QF480_09280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06794.1"
                     /translation="MSMLIKVVDIPQPLTDFIKAIIDTQLKHYASDLYPELEVVDENV
                     FDTSLTRAQQVCATLNLPIHQHFRKIYRTSGDQIYCDYRLSHTAYLLVGINGDVGSKK
                     VARIQMDLINKLLGNN"
     gene            complement(1809..>2273)
                     /locus_tag="QF480_09285"
     CDS             complement(1809..>2273)
                     /locus_tag="QF480_09285"
                     /inference="COORDINATES: protein motif:HMM:NF013705.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HJN06795.1"
                     /translation="IININGKKLRIKIKPGTKDKKKIKLAGKGSPGLNGGSPGDLFIT
                     IHVRPNINFKRKGNNIYIELPLDMYTAVLGGKIEIPTLNGNVHMTIPKGTQGGSTLRL
                     KGKGMPVYGSTSQHGDLYVKTNIVIPANLTTEEEKLFTKLKDLNHEHANKSS"
BASE COUNT          714 a          350 c          389 g          820 t
ORIGIN      
        1 taggaaactc gacttactag aaatctggta tgatatacgc gatgcaaact atttatggct
       61 tattatttca ctagtatttg ccattggagc ccatattttc agagcgctaa gatggaatct
      121 tcttattaac tcattaaaat ataaaacaaa gctatcaact acattttttg cagttatggt
      181 aggttatcta gctaacacag ccgttccaag gatgggtgaa tttgcacgtt gtggagtact
      241 ttcgaaaaag gaaaaaatac cttttaatgc gctatttgga actgttattt cagagagaat
      301 ttttgatttg ataacactat ttgttattat ccttctagtc ataatatttc aggtaaaatc
      361 gcttggtgat tttttaaagc aattatttgg tccttttttt attgagttgt tctcaaattt
      421 gacaagcata ataatctttg taggtgcgat attattaact tttgttggat tactgtttct
      481 tatcaaaaca ttaaaagaaa aaattaaaaa aatcccattt tacaacaaaa tctgggaatt
      541 tctatcgggc ttgtttgatg gcataaaaac gatcatgaaa ttgaggcaaa aatggctttt
      601 tttgatctat acttttatta tctggttttt ttacgcatta atggtttatt taccattatt
      661 aatgcttgaa gaaacaagtc atctaacttt tgttaatgga ttgacgatcc tagcaattgg
      721 tagccttggg attgtagctc ctgtacctgg aggtattggc gcttatcatt ttattgtaaa
      781 aacagtatta tacgaaatat ttaaggtagg cggaaacgcc tctggatctt atgccgtaat
      841 tactcatacc ggacaaaccc tacttaacgt tgttattgga agtttatcgt acttttactt
      901 gggcatatta gcaaaaagag aaaaaccgtt aaatgaatag tcttacttcc atatctgata
      961 aaatctatga taaccaatca cttgatctga aattaaaaga ctggagatcg ggtaataaaa
     1021 agattgtatt cacaaatggt gttttcgatt tgctacacct tggccatatt gattacctaa
     1081 gtaaagctaa agacaatgga gacattcttt ttgttggagt aaattcggat gtctcagcaa
     1141 aaaagcttgg caaaggttcc agtaggccaa ttactaatga aaaatctcga tcaatgatta
     1201 ttgcggcctt ggaatttgta gatgctgtta tgttatttga tgaagataca cctttggagt
     1261 taattaaaat tgtaatgcct gatatactag ttaaaggtgg tgattataaa cttgaagata
     1321 ttgttggata cgatgttgtt atggctaaag gaggaacaat taaaactata gatttactac
     1381 caggctattc atcaacagca atagaacaaa agattaagaa acattaacct gatactgatt
     1441 ctctgttata aaaattaaat tactaataag cacaaaatca attgtttcct agcaatttgt
     1501 ttattagatc catttgaatc cgagcaactt ttttgctccc aacatctccg ttaattccaa
     1561 ctagcaaata tgctgtatgt gaaagacgat agtcgcaata aatttgatca ccagaagtgc
     1621 gataaatttt cctgaagtgt tgatgtatgg gcaggtttaa agtagcgcat acctgttgcg
     1681 cccttgtaag cgaagtgtca aatacatttt catctactac ttcaagttct ggatatagat
     1741 cagatgcata gtgttttaat tgagtatcaa ttattgcttt tatgaaatct gtcaaaggtt
     1801 gagggatatc aactactttt attagcatgc tcatgattta agtctttaag ttttgtaaat
     1861 agtttttctt cttcggtagt taagttggcc ggaattacaa tatttgtttt tacatataaa
     1921 tctccatgtt gagatgtgct accgtaaact ggcatacctt ttccttttaa tcttaatgta
     1981 ctaccacctt gtgttccttt tggaatagtc atatgaacat tgccattaag tgtaggaatc
     2041 tctattttac cacccaaaac tgcagtatac atatctagag gaagttcaat atatatgttg
     2101 ttacctttac gcttaaaatt tatattcggg cgaacatgaa ttgttataaa taaatcaccg
     2161 ggagacccac catttaatcc tggactacct ttaccggcta gtttaatttt tttcttgtct
     2221 tttgttcccg gtttaatttt tattctgagt ttttttccat ttatattaat tat
//
LOCUS       DASCQP010000542         5457 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001956926, whole genome shotgun sequence.
ACCESSION   DASCQP010000542 DASCQP010000000
VERSION     DASCQP010000542.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 5457)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5457)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5457
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001956926"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..300)
                     /locus_tag="QF480_09290"
     CDS             complement(<1..300)
                     /locus_tag="QF480_09290"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HJN06796.1"
                     /translation="MIISLLIWIVFGSTISYLIVIGIITFGWFRLSEPKAEQHFTTGT
                     DVSIVIAVRNESNNIVTLLGQLVNQDYNKKNYEIIIVDDHSTDNTAELINQFINEN"
     gene            complement(290..1312)
                     /locus_tag="QF480_09295"
     CDS             complement(290..1312)
                     /locus_tag="QF480_09295"
                     /inference="COORDINATES: protein motif:HMM:NF015651.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase
                     domain-containing protein"
                     /protein_id="HJN06797.1"
                     /translation="MKTKLRKTYNILIRFTVVIFTVAFLYDQLFYRKDISSVFQTFSD
                     ISLGFSLNILLIITLILLPLNILLESIKWKYLIDKLETISLFNSIKGVLAGISVSMIM
                     PNRVGDYLGRVFILKKADRLQAVLSTILGSLAQLLTTLNFGLIALIFYYPEYINIYDG
                     LDIWLYIGFILMVIIVIFVMIFAYLNFSFFSIVIKQISGKYYTKIEKYSQVFSWYNQK
                     ELLNVLALSIIRYVVFSLQFYLLLRFFGINTNYFTSLMLIAVIYILMTIIPTIALTEI
                     GVRGSVSLFVFQHHFEKLGLWNSEIAIGVVSASSILWLINLIFPAIVGTIFVFSLRFF
                     RKRNDN"
     gene            1338..1886
                     /gene="ruvC"
                     /locus_tag="QF480_09300"
     CDS             1338..1886
                     /gene="ruvC"
                     /locus_tag="QF480_09300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007657299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008821 - crossover junction DNA
                     endonuclease activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HJN06798.1"
                     /translation="MERIILGIDPGTNIMGYGLILNNGNKIRIITMGILKLSSYDNHS
                     LKLKKIFERTLGIIEEYNPDEIAIEAPFFGKNVQSMLKLGRAQGVAMAAGLYKNIPIF
                     EYSPKKIKQSITGNGNASKEQVAAMLNNIVEFAEPPESLDATDGLAAAVCHHFQGTGI
                     NKRAGYSGWKSFIKDNPKRIKK"
     gene            complement(1953..3125)
                     /locus_tag="QF480_09305"
     CDS             complement(1953..3125)
                     /locus_tag="QF480_09305"
                     /inference="COORDINATES: protein motif:HMM:NF012703.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formimidoylglutamase"
                     /protein_id="HJN06799.1"
                     /translation="MDISTYLEPVNIENLTIPSNTGQYRLADIIVKYTVEYGFPDLDQ
                     IDVVLIGVSDDRATINKGSDKAPDEIRNRFYELYSHWNNLRIADIGNIVHGHQIDDTY
                     FAVKEVISELLKSNIVTIIIGGGQDITYANYLAYENIGRIINIASVDSAFDLGHDQHE
                     LNNKSYLSHIILHQPNFLFNFTNIGYQTYFVDQDALVLMKNLYFDINRLGNVKAELEE
                     VEPMVRDADILSIDISSIKHSDAPADNNVMPNGFTGEEMCKICRYAGMSDKLSSIGFY
                     ELDPSLDNNGQSAHLYAQMMWYFLDGFSNRRNDFPENNNQDYVKFNVQIENFEQELVF
                     LKSKKTDRWWMIVSSKDLVNQKYKRHQFVPCSYYDYQTALNQEIPDRWWKVQQKLM"
     gene            complement(3164..>5457)
                     /gene="topA"
                     /locus_tag="QF480_09310"
     CDS             complement(3164..>5457)
                     /gene="topA"
                     /locus_tag="QF480_09310"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008627226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003917 - DNA topoisomerase type I (single
                     strand cut, ATP-independent) activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HJN06800.1"
                     /translation="SPAKAKTIEGFSGKDFIVRSSLGHVMDLNKTKLSVDVDNDFEPK
                     FEVSPDKKKTISELKKLAKSVHTIWLASDEDREGEAISWHLFKAMGLKEENTKRIVFH
                     EITKTAISNAIESPRGIDHNLVSAQQARRVLDRLVGYELSPLLWKKVKPSLSAGRVQS
                     VAVRLIVERENEIKNHQSTSLFRIVAEFEHGDNKGKIFKAEYPVKFKKEEEAHNFLEK
                     QIGADLIVESVEKKPTKKSPAPPFTTSTLQQEASRKLGFSVGNTMRIAQQLYESGKIT
                     YMRTDSVNLSNTAIGMAKQEITNLYGEEYVKTRKFTNKIKGAQEAHEAIRPTYMNNQT
                     VDGNPDSVRLYNLIWKRTIASQMSNAELEKTIVNISTSGATKLFTAIGEVIKFDGFLK
                     VYLEGTDDDNVENQGLLPVMKSGDELTLMEMRARERYSKHLPRYTEASLVKKLEELGI
                     GRPSTYAPTISTVQKREYIVKETRPPGKQEVICLTLKDYSISSKTLSDNISSDKSKLF
                     PTDIGTLVTKFLMQYFENIMDYNFTASVEKEFDEIAEGKKEWNQMIKEFYGPFHSKIE
                     NTQENSGKFSGERLLGQDPKTGKNIYVKIGRFGPLAQLGETEQEEKPKFAGLRKNQSI
                     ETITHAEALKLFEYPRALGNYEDVEVTVAIGRFGPYVKHDNKFISLKKDDDPGSIQLE
                     RAVVLIEEKRKVEREKIIKEFDKDKKVQVLNGRYGAYLVIDKQNYKIPKGTDAASLTL
                     EECYKIAEDPNNMPKKKYFKKKK"
BASE COUNT         1729 a          988 c          829 g         1911 t
ORIGIN      
        1 attttcattt ataaactgat ttattagttc ggctgtatta tcagttgagt ggtcatcaac
       61 aataattatt tcatagtttt ttttgttgta atcttggtta acaagctgac ccaacagggt
      121 cacaatgttg ttactttcat ttcgaacagc tattacaatg cttacatcag tccccgttgt
      181 aaaatgttgc tcagccttag gttctgacaa acgaaaccat ccaaatgtga ttatcccaat
      241 cacaattaaa taagaaattg tagaaccaaa tactatccaa attaataagc taattatcat
      301 tcctttttct aaaaaatcgt aaactaaaaa caaatatagt tcccacaatt gctggaaaaa
      361 tcaaatttat aagccataaa attgaagaag cacttacaac accaatagca atttctgaat
      421 tccacaaacc aagtttttca aaatgatgtt gaaaaacaaa taaacttact gaacccctta
      481 caccaatttc ggttaatgca attgttggaa ttatagtcat tagtatatat ataactgcta
      541 tgagcatcag tgaggtaaaa taattagtgt taattccaaa aaaccttaat aacaagtaaa
      601 actgtaaaga aaaaacgaca tatctaataa tactcagtgc aagtacattt aacaactcct
      661 tctgattata ccatgaaaaa acctgagaat atttctcaat tttcgtataa tattttccgc
      721 taatctgctt aattacaatt gaaaaaaacg aaaaattaag ataagcaaat atcataacga
      781 atattacgat tatgaccatt aggataaatc caatgtagag ccaaatatcg agtccgtcat
      841 aaatatttat atattcaggg taataaaaaa taagtgcaat taatccaaaa tttaaagtag
      901 ttagtaattg agcaaggctg cctagtattg ttgaaagtac agcttgcaac ctgtcagctt
      961 tttttaagat aaaaacacgt cctagataat ctcccactct gtttggcata atcatactta
     1021 cggaaattcc agcaagtacc cctttaatag aattaaatag agatattgtt tcaagtttat
     1081 caattaggta tttccattta atactttcaa gaagtatgtt taatggaagc agtattaatg
     1141 taatgattaa gagaatgtta agtgaaaagc ctaaagatat atcagaaaaa gtttgaaata
     1201 ccgaactgat atctttcctg taaaaaagct gatcgtacaa aaatgcaacc gtaaaaataa
     1261 ctacagtaaa tctgataagg atattgtatg ttttacgtag ttttgttttc attatatata
     1321 gttaacaatt ttttaatttg gaacggataa ttttaggtat cgaccctgga acaaacatta
     1381 tgggatacgg attgatcctt aataatggaa ataaaattcg tataatcacg atgggcattc
     1441 tcaaattaag tagttatgat aatcattcgc taaaattaaa aaagattttt gaacgcacac
     1501 ttggaattat tgaagaatat aatcctgacg aaatagccat tgaagctcct ttttttggca
     1561 aaaacgttca atcgatgctg aaactaggaa gagcacaagg agtggctatg gccgctggat
     1621 tgtataagaa tatcccgatt tttgaatatt ctccaaaaaa aatcaagcaa tcaattaccg
     1681 gaaatggtaa tgcatcaaaa gaacaggttg ctgctatgct gaataatatt gttgaatttg
     1741 ctgaaccacc tgagtctctt gatgcaaccg atggattagc agcggcagta tgccatcatt
     1801 ttcaaggtac tggaattaat aaaagagcag gttattcagg ttggaaaagc tttataaagg
     1861 ataatccaaa gaggattaaa aaataagttc ttaaggttaa gtactggaaa aacaaaataa
     1921 ctattatggc taattttaaa gtcagtgtca tgctacatca gtttttgttg aactttccac
     1981 catctatccg gaatttcttg gttaagcgct gtttgataat catagtaaga acacggaaca
     2041 aactggtgtc ttttatactt ctggtttacc aaatcttttg agctaacaat catccaccac
     2101 ctatcggttt ttttgctttt caagaaaacc agttcctgct caaaattttc gatctgaaca
     2161 ttaaatttca cgtaatcttg attattattt tcgggaaaat catttctgcg gtttgaaaat
     2221 ccatctaaaa aataccacat catttgagca tataaatgag ctgattgccc attattgtcc
     2281 aatgaagggt caagttcata gaaaccaata ctacttaatt tatcgctcat gccagcatat
     2341 ctgcaaattt tacacatttc ttctccggta aacccgtttg gcattacatt attatctgca
     2401 ggtgcatcac tatgcttaat acttgatata tcaatactca atatgtcggc atctcttacc
     2461 attggctcaa cctcttccaa ttcagcttta acatttccta acctgtttat atcgaaataa
     2521 agatttttca tcaacacaag agcatcctga tcaacaaaat aagtttgata accaatattt
     2581 gtgaagttaa atagaaaatt tggttggtga agtattatat gacttaggta cgacttatta
     2641 tttaattcat gttggtcatg accgagatca aaagctgagt caaccgatgc aatgttaata
     2701 atccttccaa tgttctcata tgcaagataa tttgcgtatg taatatcttg tccaccacca
     2761 attattatcg taacaatgtt gcttttaaga agctcagaaa ttacttcttt aacagcaaaa
     2821 taagtatcat caatttgatg tccgtgcact atatttccaa tgtctgcaat ccgcagatta
     2881 ttccaatgtg aatacaattc gtaaaaccga tttcgtattt catctggagc tttgtcactt
     2941 cccttattaa tagtagctct atcgtcacta actccaatta gtacaacatc tatttggtca
     3001 aggtcaggga acccatattc aactgtatat ttaacaataa tatcggctag gcgatattgg
     3061 ccagtattgc ttggtattgt taaattttca atgtttactg gttcaagata tgtgctaata
     3121 tccattgtgc tggagatatg tactaatgat gaacgaagat aatttatttt ttctttttga
     3181 aatatttttt cttgggcatg ttgttcggat cttctgctat tttataacac tcctcaagtg
     3241 ttaatgaagc agcatcggta ccctttggaa ttttataatt ttgtttatca ataacaagat
     3301 aagctccata ccttccgttt aacacctgaa cttttttgtc tttatcaaat tctttaataa
     3361 ttttttcccg ctcaactttt ctcttttctt caattagtac gactgccctt tccagttgta
     3421 tcgatccggg atcatcatct tttttgagag agataaactt attatcatgt ttaacataag
     3481 gaccaaatct acctatcgca acagttactt ccacatcttc ataattgcct aaagcacgag
     3541 gatattcaaa cagctttaag gcctcggcat gagttattgt ttctatactt tgattttttc
     3601 ttaatccggc aaattttggt ttttcttcct gctcagtttc gcctaattgc gccagtggtc
     3661 caaaacgtcc gattttaaca taaatattct ttcctgtttt tggatcttgt ccgagtaacc
     3721 gttccccgct aaatttaccc gaattttcct gtgtgttttc aattttagaa tgaaaaggcc
     3781 cgtaaaattc ctttatcatt tgattccact cttttttccc ttcagcaatt tcgtcaaatt
     3841 ctttttcaac acttgctgta aaattataat ccatgatatt ctcgaaatac tgcatcaaaa
     3901 atttagtaac taaagtacct atatctgttg ggaaaagttt agatttatct gaactaatgt
     3961 tgtcagaaag tgtttttgaa gatatactat aatcttttaa tgttaaacag attacttcct
     4021 gttttcctgg tggcctggtt tcttttacta tatattcacg tttttgcact gtagaaattg
     4081 taggtgcata tgttgaagga cgccctattc caagttcttc aagtttttta acgaggctcg
     4141 cttctgtata tctaggaaga tgttttgaat aacgttcacg cgctctcatt tccattaatg
     4201 tgagctcatc gcctgatttc attactggca gaaggccttg attttcaaca ttatcatcgt
     4261 cagttccttc gagataaacc ttaagaaaac cgtcaaattt tattacctct ccaattgcag
     4321 taaacaattt agtagcacct gaagttgaaa tattaacaat agttttttct aactctgcat
     4381 tactcatttg tgatgcaata gttcgcttcc aaattaaatt atataatctt acagaatcag
     4441 gattaccatc aacggtttgg ttattcatat aggttggcct gatagcctca tgagcttcct
     4501 gggcaccttt aattttgttt gtaaactttc ttgttttgac atattcttca ccatagagat
     4561 tagtgatttc ttgttttgcc atcccaatag cagtatttga gagattaacc gaatcggtac
     4621 gcatataggt tatttttcct gattcgtata actgctgtgc tattcgcatt gtatttccaa
     4681 ccgaaaatcc tagtttacgt gatgcttcct gctgtagtgt agaagtagta aaaggtggag
     4741 ctggtgattt tttagttggc tttttttcaa ccgattcaac aattaaatct gcgccaattt
     4801 gcttctccaa aaaattatgt gcttcttctt cttttttaaa tttaacagga tattcagctt
     4861 taaaaatctt tcccttatta tccccatgtt caaattctgc aacaattcta aataaggatg
     4921 tgctctggtg attttttatt tcattttcac gttcaacaat taatcgcacc gcaactgatt
     4981 gaactctacc tgcagataat gatggtttaa cttttttcca tagtaatggt gacagttcgt
     5041 aaccaacaag tctgtcaaga actcttcttg cttgctgtgc tgacaccaaa ttatgatcaa
     5101 tacctcttgg tgattcaatt gcattggaga tagcagtttt tgtaatctca tgaaacacaa
     5161 ttcgttttgt gttttcctct ttaagcccca tggctttaaa caagtgccat gaaattgctt
     5221 ctccttcacg gtcttcatca gatgcaagcc atattgtatg aaccgatttg gctaactttt
     5281 tcaattcgct gatggttttt ttcttatcag gacttacctc aaattttggt tcaaagtcgt
     5341 tgtcgacatc tacactaagc tttgtcttat tcaaatccat aacatgtcca agactcgaac
     5401 ggacaataaa atccttacct gaaaagccct caattgtttt tgcttttgcc ggtgact
//
LOCUS       DASCQP010000543         2011 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001958219, whole genome shotgun sequence.
ACCESSION   DASCQP010000543 DASCQP010000000
VERSION     DASCQP010000543.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2011)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2011)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2011
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001958219"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..683)
                     /locus_tag="QF480_09315"
     CDS             complement(<1..683)
                     /locus_tag="QF480_09315"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HJN06801.1"
                     /translation="MEKLSVVIITLNEEKNIQRCLNSVKHVADEIVVVDSLSTDNTEQ
                     ICQSYGVKFIKHKFDDYVTQKNYANSKASYDYILSLDADEALSEELEKSVLNAKVVFD
                     VDGYTMNRLTNYIGSWVHHCGWYPDKKMRLFDRRKGSWEGVIIHEQFNLYQGGTEKHL
                     KGDLLHYSFHSVEEHKKQTEKFTTLGAEADFKRGKKVTFFKLIFGPPIRFIRDYFFLL
                     GILDGSVGF"
     gene            846..1910
                     /locus_tag="QF480_09320"
     CDS             846..1910
                     /locus_tag="QF480_09320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018462235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC/Alx family metal homeostasis membrane
                     protein"
                     /protein_id="HJN06802.1"
                     /translation="MHLQEIIIFSGFLIFIILMLFIDIGLFKKEVKEVSFKTALYWTI
                     GWISLALIFWGIIYLFGDKIHNIRTIDELKIIVSKYDHPIEFSSNNFDALVSDYKRNL
                     SLEYITGYLIEYALSVDNIFVMLMIFYSFGLERKYYHKVLFWGILGAIIMRFLFIFVS
                     AAVIQQFSWVLYGFGLLLVFTGVKMFIEKNKKKTIDPGNHKIVILASKLFKVDKEYKG
                     GAFFIKKNKQLYITTLFVILLVIEFTDVIFAVDSVPAIFSITKDPYIVYFSNIFAIIG
                     LRSLFFLLENMIEKFSYLKIGLSVLLVFIGVKMLVHDIFPISTMYSLLTILSILTISI
                     VISLLIPNQSFLGQDADSTS"
BASE COUNT          653 a          322 c          320 g          716 t
ORIGIN      
        1 ctaaaaccaa cactgccatc aagtatacct aggagaaaaa agtaatcacg gataaaccta
       61 attggtggac caaaaatcaa tttaaaaaaa gttacttttt ttcctctttt aaaatcagct
      121 tcagctccaa gagttgtaaa tttttctgtc tgtttcttat gctcctcaac agagtgaaat
      181 gaatagtgaa gtagatctcc ttttagatgc ttttcagttc ctccctgata aagattgaat
      241 tgctcgtgta taattacacc ttcccagcta cccttccttc ggtcgaataa cctcatcttt
      301 ttatcaggat accatccgca atgatggacc caactaccga tataattggt cagacgattc
      361 attgtgtagc catctacatc aaatacaact ttagcattaa gtaccgactt ttctagctct
      421 tcagaaagcg cttcatccgc atcaagcgat aaaatataat catatgaagc tttgctattg
      481 gcataatttt tttgagttac gtaatcatca aacttatgtt tgataaactt aaccccataa
      541 ctctgacaaa tctgttcagt attatcagtt gatagtgaat ctacaacaac aatttcatca
      601 gcaacatgtt ttacagagtt caagcatctt tggatgtttt tctcttcatt taaagtaatg
      661 atgacaacgg ataacttttc catagcaata tgaatgagtc aaagatataa gaaattgcaa
      721 caaggtttaa agcgagcgaa agtttaaagt tatgagcact ttataattcc aaaattactt
      781 ttacataatc catttttttt acaagttaat ctttcgttat ttttggcgaa catttgatta
      841 aatagatgca cttgcaagag ataataatat ttagcgggtt tttgattttt ataatactca
      901 tgttgttcat cgacattggt ctattcaaaa aggaagtaaa agaggtaagt tttaaaactg
      961 cgctttattg gactataggc tggatatcgc ttgcacttat attttgggga ataatttatt
     1021 tatttggaga taaaattcat aatattagaa caattgatga attaaagatt attgtttcaa
     1081 aatatgacca tccaatagaa ttttcatcta ataattttga tgcacttgtt tcagactaca
     1141 aacgtaatct aagtttggag tatattacag gatatcttat tgaatatgct ctttctgtcg
     1201 acaatatttt tgtgatgtta atgatttttt attccttcgg gctagagaga aaatactatc
     1261 acaaagtatt attttggggg attttgggag caattattat gcgatttctt tttattttcg
     1321 ttagtgctgc agtaattcaa cagttctcat gggtgcttta tggttttggg cttttgcttg
     1381 tctttacagg cgttaaaatg tttattgaaa agaataagaa aaagacgatt gatccaggta
     1441 atcataagat cgtaatcctt gcttcaaagc tttttaaagt agataaagaa tataaaggag
     1501 gagcattttt tataaagaag aataagcaac tgtatattac cacacttttt gtgatattat
     1561 tggtgataga atttactgat gttatttttg cggttgattc cgtccctgct atattttcaa
     1621 taaccaagga cccttatatt gtatattttt ctaacatctt tgcaataatc ggattgcgct
     1681 ctcttttctt cctgctagaa aatatgattg aaaaatttag ctatttaaag ataggactgt
     1741 cggtactatt ggttttcatt ggtgttaaaa tgcttgttca cgatatattt ccgatttcaa
     1801 caatgtattc gttgttaact atattatcga ttctcacaat aagcatagta atttctttgc
     1861 ttattccaaa tcagtcgttt ttgggccaag acgctgatag taccagctaa caaaaaataa
     1921 tattccaaca ataaaaagag gtccagaaat agcaatatat gccgaaagtg gaaatttccc
     1981 ccatgcccaa ataatataga aaatacctag g
//
LOCUS       DASCQP010000544         3140 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001958494, whole genome shotgun sequence.
ACCESSION   DASCQP010000544 DASCQP010000000
VERSION     DASCQP010000544.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3140)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3140)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3140
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001958494"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..251
                     /locus_tag="QF480_09325"
     CDS             <1..251
                     /locus_tag="QF480_09325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJN06803.1"
                     /translation="YKQMGTAYGMMYSIQNLGLFGIPILAGSILDYTNPGTPDTLNYT
                     PTIFMFLVLGFLGLIFAFLLKKEDRKRGCGIDLPMNKV"
     gene            complement(323..1066)
                     /gene="rnc"
                     /locus_tag="QF480_09330"
     CDS             complement(323..1066)
                     /gene="rnc"
                     /locus_tag="QF480_09330"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR02191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004525 - ribonuclease III activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HJN06804.1"
                     /translation="MLIWHKLRSKFSSDKGLYQSIKNIFGYYPGNIHLYKLALRHRSA
                     TTEIINGVRLNNERLEYLGDAIISAVIADFLFKSFPYENEGFLTEMRSKIVSRASLNK
                     LSMKLGLQHLISAGAESSTKAKSAGGDAFEALIGALYLDKGYSFTRKIVINRIVNIHF
                     DIEQLIISEISYKSKLNEWAQKEKQTVVFNVEEEIGEKHKKQYLVAVEISGKIISRAQ
                     DYSIKGAENLAAEKAWFIIEDNSDANKIL"
     gene            complement(1078..2334)
                     /gene="fabF"
                     /locus_tag="QF480_09335"
     CDS             complement(1078..2334)
                     /gene="fabF"
                     /locus_tag="QF480_09335"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014709165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HJN06805.1"
                     /translation="MELKRVVITGLGAITPIGKNVNDYWAALLAGVSGAAPITIFDTA
                     KFKTKFACEVKDFDAREYFDRKEVRKHDRYAQFGLIAADQAIADAGILDDASINRDRI
                     GVIWASGIGGLGTFQETVTEFALGDGTPRFNPFFIPKMIGDIASGHISIKNGFRGPNF
                     ATVSACASSANALSDAFNYIRLSKADMFVTGGSEAAIYESGVAGFNAMHAISTRNDDP
                     STASRPFDKDRDGFVMAEGGGGVIFEELEHALARGAKIYAEVAGVGLSGDAHHMTSPH
                     PEGYGAQLCMKAAIEDAGISYEDIDHINTHGTSTPVGDVVEPRAIVSLFGEHAYNINI
                     NSTKSMTGHLLGGAGAVESIATILAVQNNIIPPTINHFTDDPEIDSKLNFTFHKAQKR
                     IVNYGLTNTFGFGGHNASLIFKKFVK"
     gene            complement(2346..2579)
                     /locus_tag="QF480_09340"
     CDS             complement(2346..2579)
                     /locus_tag="QF480_09340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015546678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HJN06806.1"
                     /translation="MSDVRSKVVSIIVDKLGVEESEVTNEASFTNDLGADSLDTVELI
                     MEFEKEFNLSIPDEEAEKIETVGNAVTYIEEHQ"
     gene            2778..>3140
                     /locus_tag="QF480_09345"
     CDS             2778..>3140
                     /locus_tag="QF480_09345"
                     /inference="COORDINATES: protein motif:HMM:NF012760.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016742 - hydroxymethyl-, formyl- and
                     related transferase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formyltransferase family protein"
                     /protein_id="HJN06807.1"
                     /translation="MKNIAIFASGNGTNAERVIRYFEKSKIARVNIVITNNNKAGVIK
                     RAHSLKVDLHLINRIDFYNSDDVLDILTQYKVDLIVLAGFLWLVPETIINKYDNKIIN
                     IHPALLPSYGGKGMYGKHV"
BASE COUNT          996 a          599 c          506 g         1039 t
ORIGIN      
        1 attacaagca gatggggaca gcttatggga tgatgtattc aattcaaaat ctaggacttt
       61 ttggcatacc catattagct ggttcaatat tagactatac taatcccgga actcctgata
      121 ctctgaatta tactcctaca atcttcatgt ttttggtctt aggttttcta ggattaattt
      181 ttgctttttt gcttaaaaag gaggatcgta aacgtggatg tggcattgat ttgcctatga
      241 ataaggtata aatctgaaac acaagttaat ttctgcacat ttaatttaaa gaagtttact
      301 tatgattaat atgagtgcct acctataata ttttgttcgc atcactatta tcctcaatta
      361 taaaccatgc cttttccgcg gcaaggtttt cagctccctt tattgaataa tcctgtgccc
      421 gcgatattat tttaccacta atctcaacag caacaagata ttgctttttg tgtttttcac
      481 caatttcttc ttctacatta aaaacaacgg tctgtttttc tttttgtgcc cactcattaa
      541 gcttgctttt gtagcttatc tctgaaatta tcagttgttc aatatcgaaa tgaatattaa
      601 caattctatt aataactatt tttctggtaa aagagtaacc tttatcaaga tataatgctc
      661 cgataagtgc ctcaaatgca tctccgccag ctgatttggc ttttgtagat gattcggctc
      721 ctgcactgat caagtgttgt aatcctagtt tcatagatag cttattgaga gatgcccgac
      781 taactatttt cgatcgcatt tcagtcaaaa aaccttcatt ttcatatgga aacgatttaa
      841 ataaaaaatc cgcaataaca gcacttatta ttgcatctcc aagatattca agccgttcgt
      901 tatttaatcg tacaccatta attatttctg tcgttgccga tctatgccga agtgctaatt
      961 tatataagtg gatatttcca gggtaatacc cgaaaatatt ttttatggac tgataaagac
     1021 ctttatcaga agaaaattta gatcgtagtt tgtgccaaat aagcaaatcg ggaagtttta
     1081 tttaacaaac ttcttaaaaa taagtgacgc attatgacca ccaaacccaa aagtattggt
     1141 taaaccataa ttaacaatgc gtttttgtgc tttatgaaaa gtgaaattaa gtttactatc
     1201 aatttcagga tcatcagtaa agtgattaat tgtgggagga attatgttat tttgaacagc
     1261 caaaattgtt gctatagatt ctacagctcc agcaccacca agcaaatgac ctgtcatcga
     1321 ttttgttgag ttaatattta tattatacgc atgctctcca aaaaggctaa caattgctct
     1381 tggttcgaca acatcaccca ccggtgttga tgttccatga gtgttaatat ggtcaatatc
     1441 ttcatagctt attccagcat cttcaatagc ggctttcata cacaattgtg ctccatatcc
     1501 ttcaggatga ggagacgtca tatgatgagc atcaccagat aatcctacac cagctacttc
     1561 agcataaatt tttgcacctc tagcaagtgc atgttctaat tcttcaaaaa taacgccgcc
     1621 tccaccttca gccataacaa aaccgtcacg gtctttgtcg aatggacgtg atgcagtact
     1681 gggatcatca ttacgagttg atatggcatg catagcgtta aatccggcga caccactttc
     1741 ataaatggct gcttccgaac caccggtaac aaacatatct gctttgctaa gacggatgta
     1801 gttaaacgca tctgaaagcg cattagcaga tgatgcgcat gcacttactg ttgcaaagtt
     1861 tggtcctctg aaaccgtttt tgatagaaat atgaccagaa gcaatatcac cgatcatctt
     1921 aggaataaaa aatgggttaa atcttggagt tccatcaccc aatgcaaatt ctgttactgt
     1981 ttcctgaaat gtacctaatc caccaatacc agacgcccaa ataacaccaa tacgatcgcg
     2041 attaatagaa gcatcgtcta atattccagc atcggctata gcctgatctg cagcaataag
     2101 accaaattgt gcataccggt catgcttgcg tacttcttta cgatcgaaat actccctggc
     2161 atcaaagtct tttacttcac aggcaaattt cgttttaaat ttagctgtat caaaaattgt
     2221 tattggtgcg gctccactca ctcctgcaag tagagcagcc caataatcat taacattttt
     2281 gccaatagga gttatcgctc caagtcctgt tattacaact cgctttaact ccataaattt
     2341 attttctatt ggtgttcctc aatgtaagta acagcgttac ctactgtttc aattttctca
     2401 gcttcttcat ctggaattga taagttaaat tccttttcaa attccatgat caactcaaca
     2461 gtatcaagag aatccgcacc aagatcattg gtgaagcttg cttcattagt tacttcactc
     2521 tcttcgactc caagcttatc aacaataatg cttactactt ttgaacgtac atctgacatt
     2581 tgtataattt ttggttaaac tcgttgcaaa gaacggcatt aatgcattaa aaaacaaaaa
     2641 aaacaaaata ttttaaaggg aggttgagca ttcaattatg gtttcaatag tcgcaaatac
     2701 aacatttaag ctttttgcaa tttgaattaa ggtgatttaa actaatttag tcgtcttatt
     2761 aaagataaag tgtgcaaatg aaaaacattg caatttttgc atctggaaat ggtactaacg
     2821 ctgaacgagt tataaggtat tttgaaaaaa gtaaaatagc ccgggttaat attgttataa
     2881 ccaacaacaa taaagctgga gtaattaaaa gggctcattc attaaaagtt gatctacatt
     2941 taattaatcg tattgatttt tacaattcag atgacgtatt agatattctg acacaatata
     3001 aagttgacct tatagttttg gcaggatttt tatggctggt cccagaaact ataattaata
     3061 aatatgataa taaaataatt aatattcatc ccgcattatt accatcttat ggcggcaaag
     3121 ggatgtatgg aaaacatgtt
//
LOCUS       DASCQP010000545         1511 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001973220, whole genome shotgun sequence.
ACCESSION   DASCQP010000545 DASCQP010000000
VERSION     DASCQP010000545.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1511)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1511)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1511
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001973220"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..529)
                     /locus_tag="QF480_09350"
     CDS             complement(<1..529)
                     /locus_tag="QF480_09350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="YncE family protein"
                     /protein_id="HJN06808.1"
                     /translation="MVKRVVLLLIIAGLISCSKKEDTDPDTIKIYPGGIFIVNEGNFS
                     VANSSLSYYDPSTSEIITNLFYKINDAPLGDVAQSITINENVVYLAINNSGIIYGVNR
                     ETLEFEGKIGGLISPREMIFVDDQKAYVSDLYSSEITIVNPTSYEIIGTIEVGRTSDC
                     LVKSGNRIMAANWSAY"
     gene            complement(532..>1511)
                     /locus_tag="QF480_09355"
     CDS             complement(532..>1511)
                     /locus_tag="QF480_09355"
                     /inference="COORDINATES: protein motif:HMM:NF012801.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HJN06809.1"
                     /translation="SYSFIGNVSTELVNTFILKAGIELLRENVISNNYIEKKQRHKIS
                     SYVSLKKTFKKKFTAEALVRAEVSDSEFIPLMPMIGINYKPFARHDLHIRANVSRNYN
                     LPSLNDLYWYPNGNEDLKPEQSLQTEAGLDYSLKLNNKNLLTVSGSAYISSVNNWIIW
                     EPGDYIDWHPENIPKVLSRGAELSCQIKGKYRNILYSFFGEYAVTRTTRNSDSAKISG
                     LSNIQLIYVPMHTANGFLNISTRGYYVNWSLSFTSSRNTSLNKDKNSPFILPSYMLNN
                     ISVGKKFMLKKAGFDIRFKIYNVFNVDYQAVLWRAMPGRNFEISLNCKI"
BASE COUNT          482 a          291 c          234 g          504 t
ORIGIN      
        1 tgtaagccga ccagtttgct gccattatcc gattaccaga ctttaccaga caatcactgg
       61 tcctccctac ttctattgtg ccaattattt cgtagctagt tggattaacg atggtgattt
      121 cagaactata aagatcagac acataggcct tttgatcatc tacaaatatc atttcacgag
      181 gtgaaatcag gccgccaatt ttaccctcaa attccaaagt ttcacgatta acaccgtaaa
      241 ttatacctga attatttatt gccagataaa ctacgttttc gttaatagtg atactttgag
      301 ccacatcacc aagaggtgca tcattgatct tataaaacaa attggtgata atttcggatg
      361 tagaggggtc gtaatatgac aatgaagaat tggcaacgga aaagttaccc tcgttaacta
      421 taaatatacc accaggatat attttaattg tatcaggatc tgtatcttct tttttcgaac
      481 acgaaattaa tcctgcaatt attagtaata aaacaactct tttaaccata attaaatttt
      541 acaattcaat gatatttcaa aatttctacc cggcatagcc cgccagagta ctgcctgata
      601 atcaacgtta aatacattat atattttaaa tcttatatca aaacctgctt tttttagcat
      661 aaatttcttt ccaacagaaa tattgtttag catgtaactg ggaagtataa atggagaatt
      721 cttatccttg tttagtgatg tgtttctgga gctggtaaac gacaaactcc aatttacata
      781 gtaacccctt gtgctaatat ttaaaaatcc gttagctgta tgcataggga cataaatcaa
      841 ctgaatatta gataaaccac taatttttgc gctgtcacta ttacgtgtag ttcgtgtaac
      901 agcgtattca ccaaaaaagc tatataaaat attcctgtac ttacctttaa tttggcagga
      961 taattcagct cctctggaaa ggactttagg gatattttca ggatgccaat ctatatagtc
     1021 acctggctcc catattatcc aattattaac tgacgaaata tatgcactac cgcttaccgt
     1081 aagcaaattc ttattgttaa gctttaacga gtaatccaga cctgcctctg tttgtaaact
     1141 ctgctcaggt ttgagatctt catttccatt gggataccag tacaaatcat ttaaggatgg
     1201 cagattatag tttcgtgaaa cattagctct gatatgaaga tcatgcctag caaatggctt
     1261 gtaatttatt ccaatcattg gcatcagagg tataaattcg gaatccgata cctcagcacg
     1321 aacaagagcc tcagcagtaa actttttctt aaaggtcttt ttcaggctga catagctact
     1381 gatcttgtgt cgttgttttt tttcgatata gttattacta atcacatttt cccgcagtaa
     1441 ttctatacct gctttcaaaa taaaagtgtt aactaactca gttgaaacat tccctataaa
     1501 cgaataactt t
//
LOCUS       DASCQP010000546         2011 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001977966, whole genome shotgun sequence.
ACCESSION   DASCQP010000546 DASCQP010000000
VERSION     DASCQP010000546.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2011)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2011)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2011
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001977966"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..852
                     /locus_tag="QF480_09360"
     CDS             <1..852
                     /locus_tag="QF480_09360"
                     /inference="COORDINATES: protein motif:HMM:NF019869.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HJN06810.1"
                     /translation="LKGWKVDSDLEQTENNKLGIQWFNEKLNSTLSDIEDHFLRFRIS
                     DALMAIYKLIWDDFCSWYLEIVKPAYQQPIDPDTLESSITFFENLMKILHPFMPFITE
                     EVWHLLRDREEGNDLIISNIQVAVKFDSSIIDAFESAESIIVGIRNVRKDKNIPQKES
                     IEMLVKNGSLSQSIYFPVVAKIGNVQKIEIVEEKPEGSIIFTVGAQEFYIPIDSNIDV
                     EEEIAKLENELNYTNGFLKSVMKKLSNDRFVNNAPSAVVENERKKQADAEARKKVIEE
                     QLNSLKK"
     gene            complement(889..1848)
                     /locus_tag="QF480_09365"
     CDS             complement(889..1848)
                     /locus_tag="QF480_09365"
                     /inference="COORDINATES: protein motif:HMM:NF013954.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004040 - amidase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucosaminidase domain-containing protein"
                     /protein_id="HJN06811.1"
                     /translation="MTKPNKQVTSLLLATVILMSVTSLVAQKRIATLEYIETYKSIAI
                     KKQKKYRIPASITLAQGILESGSGNSKLARKANNHFGIKCHKGWTGKKYHTDDDAKNE
                     CFRKYKKAEDSYKDHSEFLTQRGRYSFLFEYKTNDYKKWAYGLKQAGYATNPKYPQLL
                     IKIIEKYNLDKYDKKVKKKQDKKTDIKKENYIAISTANFKQVDRWSSGRKIYENNGVK
                     LIIIEKGDTFNGLADEFDIYRWQFKNYNDLEKKHVLKIGEVIYLEKKKRKADKKYKTH
                     VINARETIHYISQLYGISLKRIYKLNNLPKGIQLEEGKKIKLR"
BASE COUNT          631 a          310 c          332 g          738 t
ORIGIN      
        1 ttaaagggat ggaaagtgga ctcagatctg gaacaaactg aaaataataa acttggaatt
       61 cagtggttca atgaaaagct taacagtaca ttgagtgata tagaagatca ttttttaagg
      121 tttagaattt cagatgcatt gatggctata tataagctca tttgggacga cttttgcagt
      181 tggtatcttg agattgttaa accggcttac cagcaaccaa ttgatcctga tactctagaa
      241 agttcaatta cattctttga gaatctgatg aagattcttc atccatttat gccttttata
      301 acagaagaag tttggcattt attaagagat agagaggaag gtaacgattt aataatctca
      361 aatattcaag ttgcagttaa atttgacagt agtataattg atgcatttga aagcgcagaa
      421 agcattattg ttggaatcag gaatgtacgt aaagataaga atattcctca aaaagagagc
      481 attgaaatgc ttgttaaaaa tggatctcta tcacagagca tttactttcc agttgttgca
      541 aagattggta atgttcaaaa aattgaaatt gttgaagaaa agcctgaggg ttcgattata
      601 tttacagtag gtgcccagga attctatatt cctatcgatt cgaatatcga tgtagaggaa
      661 gagattgcaa agctagaaaa tgagcttaat tatacaaatg gatttttaaa atctgtgatg
      721 aaaaaattat caaatgacag atttgtaaat aacgctccat ctgctgtggt tgagaacgaa
      781 cgtaaaaagc aggcagatgc tgaagcacgt aaaaaggtta ttgaagaaca attgaattct
      841 ttgaaaaaat agaaatccaa agtaacaaaa ctaacttcgg tgcctcaact atctcaactt
      901 gattttttta ccttcttcta gttgaatccc cttcgggaga ttattcaatt tgtatattct
      961 ttttaagcta attccgtaga gttgtgaaat gtagtgtatt gtttctctgg cgttaataac
     1021 atgagtctta tattttttat cagctttccg ttttttcttc tcaagatata ttacttcacc
     1081 aatctttagt acatgtttct tttctaaatc gttataattt ttgaattgcc aacggtaaat
     1141 atcaaattca tcagcaaggc cattgaatgt gtcacccttt tcaattatta taagtttaac
     1201 accattattt tcatatatct ttcttcctga agaccatctg tcaacctgct taaaatttgc
     1261 agtagaaatg gcaatgtaat tttccttttt aatatctgtt tttttgtctt gtttcttttt
     1321 aaccttttta tcatatttat ccagattata cttctctata atcttaatta acagttgagg
     1381 gtattttggg tttgtagcat atcctgcttg ctttaatcca taggcccact tcttgtaatc
     1441 atttgtttta tactcaaata aaaatgaata cctgcctctt tgtgttagaa attcagaatg
     1501 gtctttatac gaatcctcag cttttttata tttacgaaag cactcgttct tcgcatcatc
     1561 atctgtgtga tattttttgc ctgtccatcc tttatggcat ttaattccaa agtggttatt
     1621 tgctttacgt gccaacttac tatttccgct accagattct aatataccct gagcaagtgt
     1681 aatagatgca gggatccgat acttcttttg tttcttaata gcaatggatt tataggtttc
     1741 aatatactct agtgttgcta ttcttttttg agctactaga cttgtaactg acataaggat
     1801 gacagtagct aaaagaaggc ttgtaacttg tttattcggc ttagtcaaga ttgtaatcaa
     1861 ttggtagtaa caaatgtacc tgaataatta gctttatctt atctgataaa acgtactttt
     1921 acacaaaaca ttgttattaa cccttgatta acccttgttc attgtagcaa tgttgtgatt
     1981 attaaatctt atttttaatt tactgatatc a
//
LOCUS       DASCQP010000547         2149 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001980858, whole genome shotgun sequence.
ACCESSION   DASCQP010000547 DASCQP010000000
VERSION     DASCQP010000547.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2149)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2149)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2149
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001980858"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(127..942)
                     /gene="ppk2"
                     /locus_tag="QF480_09370"
     CDS             complement(127..942)
                     /gene="ppk2"
                     /locus_tag="QF480_09370"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR03707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006793 - phosphorus metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 2"
                     /protein_id="HJN06812.1"
                     /translation="MKNKKSVLDKDGKLKEDIYHHDLAKLQIKLVKLQEWIKLKGLKV
                     VVIFEGRDAAGKGGVIKRITESLNPRICRVEALGTPTEKEKTQWYFQRYVAHLPAAGE
                     MVLFDRSWYNRAGVEHVMGFCTKNEYWDFLRSCPNFEQMLIRSGIILIKYWFSVSAEE
                     QEKRFQARLKNPAKRWKLSEMDLKSRELWVEYSKAKDNMFDYTDTKIAPWYDVPADDK
                     KKARLNTIRHLLSRIDYKDIPYSKINLEKRTIDDSYVRPPIEDNNIVKDYYSD"
     gene            complement(980..>2149)
                     /locus_tag="QF480_09375"
     CDS             complement(980..>2149)
                     /locus_tag="QF480_09375"
                     /inference="COORDINATES: protein motif:HMM:NF013117.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel"
                     /protein_id="HJN06813.1"
                     /translation="LLSFVAYKLAVFLLRKLIVPLAAKTKSHLDNLLLKNRFFIRIAF
                     LVPASIIYYSLESELFIHAGLSVFIKKLITIFFYVITVLIFDSLLSTINDYYNKFHIA
                     KDHPIKGIIQVVKIIIYILGLLGIIGFLFDKDISSIFIGIGTLSAVLMLVFKDPILGF
                     VGGLQLIFNKMIAIGDWISMPKYGADGNVLEINLTTVKVQNFDKTIITVPTYSLISGS
                     FQNWRGMENSGGRRIKRAISIDMDSVKFCNEDMLERFKKIDVLKDYINKTEKEIDGFN
                     TAEKIDLAVLVNGRRQTNLGVFRAYLKAYLRKREDIHNDMTFLVRHLDPTEKGLPIQI
                     YVFTTTVDWAEYEDIQANIFDHILAVVPEFELSVYQFPSSVDVLKLGSEDIKQTT"
BASE COUNT          707 a          413 c          309 g          720 t
ORIGIN      
        1 ctgtaattgc tgatatggat aataactcag taaaaattcg tggtcatgag ctatcaactg
       61 atgaaattgg cagcaagata gaaaacatag ggtatagata caatggtgta gtttctgatc
      121 caaaaactag tcagaataat aatctttaac aatattgtta tcttcaatag gtggacgaac
      181 atagctgtcg tctatggtcc ttttttccag attaattttt gaatagggaa tatctttata
      241 atctatacga ctcaacaaat gtcgaatagt atttagtctc gcttttttct tatcgtcagc
      301 tggtacatca taccaaggtg caattttagt atctgtataa tcgaacatat tatctttagc
      361 ctttgagtat tcgacccata actcacgaga ctttaaatcc atttcactta atttccatcg
      421 ctttgccgga tttttcaatc ttgcctgaaa ccgtttttcc tgttcctcgg cactcacaga
      481 aaaccaatac tttattaata ttatacctga acggatcaac atttgctcaa aattggggca
      541 tgaccgtaga aaatcccaat attcattttt tgtgcaaaac cccataacat gttcaacacc
      601 tgccctgtta taccatgatc tgtcgaataa caccatctca ccggcagccg gaagatgagc
      661 aacatacctt tgaaaatacc attgcgtttt ctctttctca gttggagtac ctaaagcttc
      721 aacacgacaa attctaggat ttagagattc cgtaatacgt tttattactc caccttttcc
      781 tgcagcatct cgcccctcaa aaataacaac tactttaagt cctttgagct tgatccattc
      841 ctgcagtttt actaatttaa tttgtagctt ggctaaatcg tgatgatata tatcctcttt
      901 aagtttgccg tctttatcaa gtacagattt tttatttttc attagagttg aattagtaat
      961 tcatagagtc aaaaatcgat taggtagttt gtttaatatc ttctgaaccc aacttcaaaa
     1021 catcaacact ggaaggaaat tgataaacac ttaattcaaa ttctggaacg actgccagta
     1081 tatggtcaaa aatattagct tgaatatcct catattcagc ccaatcaaca gttgttgtaa
     1141 aaacataaat ttgtataggt aggccttttt cagtaggatc gaggtgacgt accaaaaatg
     1201 tcatatcgtt atgtatatcc tctcttttcc tcaagtaggc ttttaagtat gccctgaaaa
     1261 caccaagatt cgtctgcctt ctcccattaa ctaaaactgc aagatcaatc ttctcagctg
     1321 tattaaaacc atctatttcc ttctctgttt tattaatata atcttttaat acatcaatct
     1381 ttttaaacct ctcaagcata tcctcgttac aaaatttaac gctatccata tcaatactaa
     1441 tagctcgttt tattcttctc ccaccagaat tttccattcc tctccagttt tgaaaagaac
     1501 ctgaaatcaa actataagtt ggtactgtga taatggtttt atcaaaattc tgaaccttaa
     1561 cagtagttag gtttatctct aatacattgc catctgcacc atatttaggc atagaaatcc
     1621 agtcgccaat tgcaatcatc ttattaaaaa taagttgcaa tccacccaca aatccaagta
     1681 tcggatcttt gaataccaac atcaaaactg ctgacaaagt tcctattcca atgaaaattg
     1741 aacttatgtc tttatcaaaa agaaatccta taattcctaa cagaccaagg atgtaaataa
     1801 taatcttaac aacttgaata atacctttta ttggatggtc tttagcaata tgaaatttgt
     1861 tataataatc gtttattgtg cttaataaac tatcgaaaat tagaaccgtt ataacgtaaa
     1921 agaaaattgt gattaatttt ttaataaaca ccgacagacc tgcatggata aacagttcac
     1981 tctccagtga gtagtaaata atagatgctg gaactaaaaa tgcaatacgg ataaaaaatc
     2041 tgtttttaag aagaagattg tcaaggtgag atttagtttt tgcagctaat ggtactatta
     2101 actttctgag taggaatact gcgagtttgt aagcaacaaa acttaggag
//
LOCUS       DASCQP010000548         1741 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001981698, whole genome shotgun sequence.
ACCESSION   DASCQP010000548 DASCQP010000000
VERSION     DASCQP010000548.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1741)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1741)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1741
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001981698"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            160..771
                     /locus_tag="QF480_09380"
     CDS             160..771
                     /locus_tag="QF480_09380"
                     /EC_number="3.4.21.105"
                     /inference="COORDINATES: protein motif:HMM:NF013827.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HJN06814.1"
                     /translation="MILTFIIIIATAIISIAAFNNTELFDKLKFNAYQIKHSGEKWRF
                     FSYALVHSGWIHLIINMYVLYSFGRVVERSFSVKFGALGLLYYALLYLGGVLFSTLFD
                     FGKHKNDMYYNAVGASGAVSAVVFSSILVFPSGSIFLFPIPFPLPSWVFGIAYLIYSA
                     YMGKKGVDNIGHNAHFWGAIFGIVLTIIIVPNVIPNFFSSLFN"
     gene            789..1190
                     /locus_tag="QF480_09385"
     CDS             789..1190
                     /locus_tag="QF480_09385"
                     /inference="COORDINATES: protein motif:HMM:NF020950.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease inhibitor I42 family protein"
                     /protein_id="HJN06815.1"
                     /translation="MKKFIKSLIIVCFTVFITSCAGPFTIEDSGSTVNLTNDDPFEIE
                     LEGNASTGYTWQVMPFDSTVIKQVGEPEFNSKDGKIGSGGMITFKFQTIGDGQTDLLL
                     VYRRLWEENEPPAKKFELKIVVGTMGRILED"
     gene            complement(1210..>1741)
                     /locus_tag="QF480_09390"
     CDS             complement(1210..>1741)
                     /locus_tag="QF480_09390"
                     /inference="COORDINATES: protein motif:HMM:NF014659.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HJN06816.1"
                     /translation="RLLLSEPLMGDFYFGRAVVLLAEHNDEGSFGLVLNKPVVHKFNS
                     IVKDFPDFDGQLYVGGPVETNSLFFVHSIGDYIEGSIEIGSGIYWGGDIEVIKEMILL
                     KSITPNDIRFSIGYSGWSPDQLQEELKRNSWVVSTGLNKDILKIDPKNMWKQLLAPLG
                     DKYSYWPNFPSDPGLN"
BASE COUNT          541 a          293 c          306 g          601 t
ORIGIN      
        1 agcctggttt gttttgagaa aaaaaccgca aaataaactt tggccaatta ttgctgtgct
       61 ttctatgatt ttagtttatt caattcctca tagtgtacta ggttcggaaa ttgatcatac
      121 aaaagatgta aaacaaaata ctgaaacaat taaaaactga tgatacttac atttattata
      181 ataattgcga cagctattat atctatagct gcttttaaca atacagaact gtttgataag
      241 ctgaaattca atgcctatca gataaaacat tcaggggaaa aatggcgatt ttttagctat
      301 gcactggttc actcagggtg gatacatttg ataataaata tgtatgttct gtattcattt
      361 ggtagggtag tagaaagatc tttttctgtt aaatttggtg ctctaggttt gctttattac
      421 gcgctacttt atttaggagg agtattattt tcaacattat tcgattttgg gaagcataaa
      481 aacgatatgt attacaatgc tgtaggtgct tcaggtgccg tgtcggcagt ggttttttcc
      541 agtatactcg tatttccatc tggaagcatc tttctttttc caattccttt tcctttacca
      601 tcgtgggttt ttggaatcgc ttatctaatc tactcggcct acatgggtaa aaagggtgtt
      661 gacaacattg ggcacaatgc tcatttttgg ggcgctattt ttggaattgt actaacaata
      721 attatagttc caaatgttat tccgaatttt ttctcatctc tttttaatta attaatatat
      781 actcaaatat gaagaaattt ataaagtcat tgataatagt ttgttttacg gtttttatta
      841 cctcctgtgc tggtccattt acaattgaag atagcggctc aactgtaaac ctgactaatg
      901 atgatccatt tgaaatagag cttgaaggaa atgcttcaac tggttataca tggcaggtaa
      961 tgccatttga ttcaactgtt attaaacaag ttggcgaacc tgagtttaat tctaaagatg
     1021 gcaaaattgg gtcaggcgga atgattactt ttaaatttca aactatcggc gacggacaaa
     1081 ctgatctgtt gttagtttac aggagattat gggaagagaa cgagccgcca gcaaaaaagt
     1141 ttgaactgaa aattgttgtt ggtactatgg gtagaatact tgaagattga tctctctctt
     1201 tttaagtgac taattcaatc ccggatctga tggaaaatta ggccaataac tatatttatc
     1261 accaagtggt gcaagtaatt gtttccacat gtttttagga tcaattttta gtatatcctt
     1321 atttaagcct gttgaaacta cccatgagtt tcttttcaat tcttcttgca actgatcagg
     1381 tgaccaacca gaatatccta ttgaaaacct tatgtcgtta ggagttatag atttaagtag
     1441 aatcatttcc ttaattactt caatatcacc accccaatat attcccgaac caatttctat
     1501 tgaaccttct atataatcac caatagaatg aacaaagaac aagctgtttg tttcaacagg
     1561 tccgcctaca tacagttgac catcaaaatc aggaaaatct ttaactatag aattaaactt
     1621 atgtactact ggcttgttta atactaatcc gaatgagcct tcatcattgt gttcagcgag
     1681 cagtaccact gcacgcccaa agtaaaagtc acccataaga ggttccgata acaatagtct
     1741 g
//
LOCUS       DASCQP010000549         1735 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001992849, whole genome shotgun sequence.
ACCESSION   DASCQP010000549 DASCQP010000000
VERSION     DASCQP010000549.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1735)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1735)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1735
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001992849"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..714
                     /locus_tag="QF480_09395"
     CDS             <1..714
                     /locus_tag="QF480_09395"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HJN06817.1"
                     /translation="TGSGIKVLKLYHPVYDMFKPNPDFDIAKAKKEMGLKKYVFLYFG
                     FIRKYKGLHNVIAAFANLAKQRDDVSLLIVGESFWNTLDSNKLSTRVKNATFGVAKKI
                     FLKNQDNEKDYNPLALIEKLNIKDLVYVYNEFVPNEEVPKYFQVSDNIMLFYLTATPS
                     GVESIGYNFNMPMLATNVGHFPETVKEGFNGYLAQDRDIKSMILAMNKAIEEPINRDN
                     VAATSQDMSWDNYAAEIIR"
     gene            770..1342
                     /locus_tag="QF480_09400"
     CDS             770..1342
                     /locus_tag="QF480_09400"
                     /inference="COORDINATES: protein motif:HMM:NF024969.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-sedoheptulose 7-phosphate isomerase"
                     /protein_id="HJN06818.1"
                     /translation="MNIINSIKESIATKQLFVNDEKNIDLIKKATKHCITAFNNNGKV
                     LLCGNGGSAADAQHIAAELSGRFNYDRDPLYAEALHVNSSFITAVGNDYGYDDVYSRM
                     IKAAGKSGDVLIGISTSGNSTNVVNAIKEAKKRGMITIGLTGLSVGKVDEVSDVCIKA
                     PSKNTARIQELHILIGHVICEEIENTLFPR"
     gene            1427..>1735
                     /locus_tag="QF480_09405"
     CDS             1427..>1735
                     /locus_tag="QF480_09405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase"
                     /protein_id="HJN06819.1"
                     /translation="MIPAFLKQINNTWTLFLDRDGVINKQIIGGYVSTPEECEFLPGV
                     LDSLVFFSSIFKRIIVITNQQGVGIGIMTEADLTIVHNHMIEVINKVGSNLDAIYYCT
                     D"
BASE COUNT          621 a          258 c          323 g          533 t
ORIGIN      
        1 actggtagtg gtataaaagt attaaaactt tatcacccag tttatgatat gtttaaacct
       61 aatcctgact tcgatatagc caaggcaaaa aaggaaatgg gattgaaaaa atatgtgttt
      121 ctctactttg gatttattag aaaatataaa ggtttgcata atgtgatagc agcttttgcc
      181 aatttagcaa aacaacgtga tgatgtatcg ctgttaattg ttggtgaatc tttttggaac
      241 actctcgatt ctaataaatt atctacaaga gtaaaaaatg caacttttgg tgtcgcaaaa
      301 aagattttcc taaagaatca agataacgag aaggattata acccactagc gctaatagaa
      361 aagctaaata ttaaagattt agtttatgta tataatgagt tcgtgccaaa tgaagaagtt
      421 cccaaatatt ttcaagtaag cgacaatata atgttgtttt acttaacggc aactccatca
      481 ggtgttgaat ctataggtta taactttaat atgcctatgt tagctactaa tgttggacat
      541 ttcccggaaa cggttaagga aggcttcaac ggttatctgg ctcaggatcg tgatataaaa
      601 tcgatgatcc tagcaatgaa taaagctatt gaagaaccaa taaacaggga taacgttgca
      661 gccacttccc aagatatgag ttgggataat tatgctgctg aaattattag gtaagctaat
      721 tatgtatgtc tatctaatga tagaaattat attttataaa tttgccacca tgaacataat
      781 taactctata aaagaatcaa tcgcaactaa gcaacttttt gtgaatgatg agaaaaacat
      841 tgatttaata aaaaaggcta ctaaacattg cattacagct tttaataata atgggaaagt
      901 actgttatgt ggaaacggag gaagtgcagc tgatgcccag catatagcag ctgaattatc
      961 tggtagattt aactatgacc gagatcctct gtatgctgaa gcacttcacg taaattcatc
     1021 atttattact gctgttggta acgattatgg ttatgatgac gtttatagtc gtatgattaa
     1081 agcagctgga aaaagtggtg acgtactaat cggcatcagc acctcaggca attcaaccaa
     1141 tgttgtcaac gcaattaagg aagcaaaaaa aagaggtatg atcactatcg ggctgacagg
     1201 tttatcagtg ggaaaagttg atgaagtttc ggacgtatgt ataaaagcac cttcaaaaaa
     1261 cacagcgcga attcaagagt tgcatattct tatcggacat gtaatttgtg aagagattga
     1321 aaatactttg ttcccaaggt aaacaatgat taaatgataa aaattctacg tactaactca
     1381 tcacgcattt aattagtagc ttaactaaaa taacaataga accaacatga tccctgcctt
     1441 ccttaaacaa attaataata catggacact gtttttagat cgtgacgggg taattaacaa
     1501 gcaaattata ggaggctatg tttcaacacc tgaggaatgt gaatttcttc ccggagtttt
     1561 agatagtctg gtattttttt catcaatatt taagagaatt atagttatta ctaaccaaca
     1621 aggagttgga ataggtataa tgacagaagc tgatttaact atagttcaca atcatatgat
     1681 tgaagttata aacaaagtgg gcagtaacct tgatgctatt tattattgta ctgac
//
LOCUS       DASCQP010000550         2533 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001994701, whole genome shotgun sequence.
ACCESSION   DASCQP010000550 DASCQP010000000
VERSION     DASCQP010000550.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2533)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2533)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2533
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001994701"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1025
                     /locus_tag="QF480_09410"
     CDS             <1..1025
                     /locus_tag="QF480_09410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016273568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="helicase-related protein"
                     /protein_id="HJN06820.1"
                     /translation="VIDESHVTIPQIKAMYGGDRSRKHNLVEYGFRLPAAMDNRPLKF
                     EEFEQLSRQVIYVSATPSDYELGKSEGVLVEQLIRPTGLLDPPIEVRPSINQIDDLLD
                     EIENTVSNKYRVLVTTLTKRMAEELTKYLINLGINTRYIHSDVDTLDRVEILRDLRLG
                     NFSVLVGVNLLREGLDLPEVALVAILDADKEGFLRSTKSLTQTAGRAARNLESKVIMY
                     ADKITKSMAITIEETDRRREKQLAYNKKHNISPKAIIKSIDAIMGQTAVASAHIVEKE
                     YQSKIKAGIAADPVVQYMTSKEILLAIEKNKKDMQAAVKELDFIDAARLRDENKVLEE
                     LLNQKE"
     gene            1038..2207
                     /locus_tag="QF480_09415"
     CDS             1038..2207
                     /locus_tag="QF480_09415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06821.1"
                     /translation="MKIVCINYVLMLSLLITSCVSSSKRLQQGEYDKAIVKAAKVLQK
                     KPTKTNEVKTLKKAYNLANNKDLEAIKLLKLSGQPDIYEKVVIHYRRLINRQEVIERL
                     SDEVLVRIGFVPVDYSQEFITSKNKAAKFFYAHAIKLLEEGDKQSARQAWDELAKVKN
                     YFPVYQDVDDKMNEAYSKGVNHVIFMIANESRTVLPEDFEDELLKISLKNINKQWLNF
                     DTYVDKNINYDYSIYLNIKHIEVSPERVKEIQYEESKEIEDGFEYVLDKNGNVKKDED
                     GNDIKVPRYSIITCYVTETRLNKRAIVSGSLDFYDERSGQLVKTMPIASEFVFDYRLA
                     IANGNLDALKKKTRRLIKHEPIPFPTDLQLIFDTNENLKSKVKRIINSNRAILLN"
     gene            complement(2304..>2533)
                     /locus_tag="QF480_09420"
     CDS             complement(2304..>2533)
                     /locus_tag="QF480_09420"
                     /inference="COORDINATES: protein motif:HMM:NF014615.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="homocysteine S-methyltransferase family protein"
                     /protein_id="HJN06822.1"
                     /translation="DSGWKSRIRAIRANASIKSHAELDDSETLDAGNKEELAEEYKNL
                     KSLLPNLNILGGCCGTDHTHMEKICEMWFKE"
BASE COUNT          915 a          413 c          477 g          728 t
ORIGIN      
        1 ctgtaattga cgagagccat gttacaatac cgcaaataaa ggctatgtat ggtggtgaca
       61 ggtcaaggaa acataatctg gtcgaatacg gattcaggct gcctgcagca atggataacc
      121 gccccttaaa gtttgaagaa tttgagcaac tctcacgtca ggttatctac gtaagtgcaa
      181 ctccttccga ttatgagctt ggaaaatctg aaggtgtgct ggttgaacaa ttaatcaggc
      241 caacaggttt gctcgatcct ccaattgaag tgaggccaag tataaaccaa attgatgacc
      301 tgctggatga aattgaaaat actgtcagca ataaatatag agtattagta accacactta
      361 ccaaacgcat ggctgaagaa ctaaccaaat atcttattaa cttagggatc aatacaagat
      421 acattcattc ggatgtggat actttagatc gagtagagat actaagagat ctcaggcttg
      481 gtaactttag tgttcttgtt ggtgttaacc tgctgcgcga aggacttgat ttaccagaag
      541 ttgctcttgt tgctatcctt gatgccgaca aagaaggttt tttaaggtca actaaatcac
      601 ttacgcaaac agctggtaga gcagcccgta atcttgaaag caaggtaata atgtatgctg
      661 ataaaatcac taagtctatg gctataacta tcgaagaaac agacagaaga cgagaaaagc
      721 aacttgcata taacaaaaaa cacaatatat cgcccaaagc aattattaaa tctattgatg
      781 caataatggg ccaaacagcc gtggcgtcag cacatattgt tgaaaaggaa tatcaatcca
      841 aaataaaggc tggaattgca gctgatcctg ttgttcagta tatgacctca aaggaaatct
      901 tactagcgat agagaaaaat aaaaaagata tgcaggcggc tgtaaaagag cttgacttta
      961 ttgatgctgc ccgtttgaga gacgaaaata aggtacttga agaactacta aatcaaaaag
     1021 aataaacaca caatccaatg aaaatagtat gtatcaacta tgtgttaatg ctttcacttc
     1081 ttataacttc atgtgttagc tcatcaaaac gtttacaaca aggcgaatat gataaagcta
     1141 ttgttaaggc ggctaaagtt ttacaaaaaa agccaacaaa aactaatgag gtcaaaacat
     1201 taaaaaaggc atataatctg gctaataata aagatctaga agcaataaag ttattaaaac
     1261 tttcaggaca gcctgatata tatgagaaag tagtaataca ttataggcgg ctgattaaca
     1321 gacaagaagt tattgaaaga ctttctgatg aagtgttagt tcgcattgga tttgttccag
     1381 tcgattattc tcaggagttc attacatcta aaaacaaagc agctaagttt ttctatgctc
     1441 atgcaattaa gctgctagaa gaaggcgata aacaaagtgc acgacaggct tgggatgaac
     1501 ttgccaaagt gaagaattat tttcctgtat atcaagatgt tgatgacaag atgaatgaag
     1561 cttattcaaa aggagttaat catgtaattt ttatgatagc taacgaaagt cgcactgtac
     1621 ttccagaaga tttcgaagat gagctactaa aaatatcttt gaagaacatc aataaacaat
     1681 ggcttaattt cgatacttat gtagataaga atatcaatta tgattattcg atttacttaa
     1741 atatcaagca tatagaagtt agtccggaac gagtgaagga aattcagtat gaagaatcga
     1801 aggaaattga agatgggttt gagtatgtat tagataaaaa tggtaatgta aagaaagatg
     1861 aagatggaaa cgatattaag gttcctagat atagtattat aacatgctat gtgactgaaa
     1921 ccagattaaa caaaagagct attgtatcag gatccttaga cttttatgat gagagaagtg
     1981 gtcaattagt taaaaccatg ccaatagcat ctgaatttgt ttttgattac agactagcca
     2041 ttgcaaatgg aaatttggac gcccttaaga aaaaaacaag aaggctaatt aagcatgaac
     2101 caataccttt tccaacagat ttgcagctaa tctttgatac gaatgaaaat ttgaaatcca
     2161 aggtaaaacg tattataaat tcaaaccgag cgatattgct taactaagat caaaagtaat
     2221 ttagaactac cctcgtatgc caatatttgt cgtattcttt tctatttagc aacaatagct
     2281 aattaattga tattttgtag gagttactct ttaaaccaca tttcgcaaat tttctccata
     2341 tgagtatggt cagttccaca acatcctcct aaaatattaa gatttggaag tagcgatttc
     2401 agatttttat actcttcagc aagttcttct ttatttcctg catcaagcgt ttctgagtca
     2461 tctaactctg catgactttt gatggaggca ttagctctaa tagccctaat tctacttttc
     2521 cagccactat cag
//
LOCUS       DASCQP010000551         6538 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002000533, whole genome shotgun sequence.
ACCESSION   DASCQP010000551 DASCQP010000000
VERSION     DASCQP010000551.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 6538)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6538)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6538
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002000533"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..769)
                     /locus_tag="QF480_09425"
     CDS             complement(<1..769)
                     /locus_tag="QF480_09425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06823.1"
                     /translation="MKFTISIIKQFLFWMIIFAMSRAVFFVYYSGIFKIEKIEISEIF
                     ASFWYALPLDVATACYILIIPIIILLIQTVITTKWLNYTNLAYTFLVLVAYILITTAE
                     IGIYDEWKTKLQFKALNYLSNPDEIYNSTSTSTFFILIFILILQVVISYWFYRKFVFV
                     KINETPRNVIFSSLFFLIVSTMLFLGIRGGINEIPITQSKSYFSKHSFINLASVNSGY
                     SLWISTLENYKFKDANPYEFYNPEEATRRVNELHEIKK"
     gene            complement(858..1292)
                     /locus_tag="QF480_09430"
     CDS             complement(858..1292)
                     /locus_tag="QF480_09430"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HJN06824.1"
                     /translation="MKLIITKYKRGDYDTLINLWETGGLSYKPLGRDSRKSIEKEVDN
                     NCSLFLFAQVDDMYVGSVLATHDGRKGWINRVVVIPDYRHKGIARKLVESAEAWLIEQ
                     GIGIFACQIEGYNNESFKAFKKLGYIPFKGIRYLTKRIHPDI"
     gene            complement(1373..4015)
                     /locus_tag="QF480_09435"
     CDS             complement(1373..4015)
                     /locus_tag="QF480_09435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06825.1"
                     /translation="MQIKLIIVAIFYIIFFSSYCIAQSDSTLTLEQINHYSDQSKQLI
                     SYLEGTVNFLGDPNELPSDKDMIINNSFLKIFASDKVQIEDDLDENRKLPLNKDVQAY
                     LKDIDFFYKKVNFGFEIEKTEQLVTDSGVIVFKFTLNRHLEGITVNNDTVNNNQLRFI
                     EINLDPLQRDLKIASIYTTKVREKEELKYWWNNMPTDWKNFFGKSIIVYDTLPFKNII
                     EFSDSTIITMKWAEVVSADTIIVVDDINTDPVLLAGDTALIVYETGSVMVLDTIKVNT
                     STIYRILNTLKSIRRIDLSDNLIIRNLIPVSELTDLVEINISNTLIEDLSPIRNLNKL
                     EIFNCSGSPVTALEPLRYVTTMKELYCSNTSIERIGILSNMEELSELDLSNSSITSLD
                     ALRGLNKLAHLKISKTNVTNLSPLNNLSSLSDLNISNTKVKTLTTIDSLISLQNLNID
                     NTHIYNLQPISYYTDLSILQANNTSIADLNPLSNLSLLKVIYCDNSNVTMAEANRFMD
                     ANPQCLVIYNSQELINWWNALTVEWKDIFRTKFSITPPVTKEKLHQLINQTSLSVAYN
                     RNIHSLQPLRMLHRLEELDIQNTSISDLTPLSGLNNLETLNLNETNVNTLEPLSSLHN
                     LKQISFENTEIDELKPLSGSNFLEIIYCDKSKIKAAKALSFKNMHNSCLIIYQSQKLR
                     LWWDNLDAVWEQMFIDQFNLSANPSNEELQELVDLTALEIKNNVSLNNLTPLHIFVRL
                     EQLTVSNTSITDISPITSLTGLKKLNISSNPIFDLGLINKLTGLEELSIENTSVEDLE
                     PISGLKRLISLNIAGTRMKSLKYIQGLNNLEKLYINNTRIKSLKPIIELSKLMLLQCY
                     NTSIRSSRVEEFKISHPQTEVVFY"
     gene            complement(4000..4842)
                     /locus_tag="QF480_09440"
     CDS             complement(4000..4842)
                     /locus_tag="QF480_09440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06826.1"
                     /translation="MRRLILLITIFIAIVSSVYSQTINEFTEDETIFYAMNKQVGQFV
                     HRFNMEEDQIGKLLVKTDSRFHNNKLRKQILPGMFDKLNPRTSGNLKQYFISDVTNED
                     TPIYLNFLDRDWYAEVSATFTANGIDENIILFLTLEPENLGSKWILSNVYYRSLSKLF
                     PKVDTGYQKKHFLHPQSHELDFMNLHKALENEYQIEYFASTNYQPDYLTLFFYLVKTG
                     KLKFKQIDNVKFHFFQIKNWYFELSYYNRNSTNSGWLISNLIYVKEDDKKELIRTYKL
                     CRSN"
     gene            5146..>6538
                     /locus_tag="QF480_09445"
     CDS             5146..>6538
                     /locus_tag="QF480_09445"
                     /inference="COORDINATES: protein motif:HMM:NF027232.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06827.1"
                     /translation="MKKLITLIFMLGLLIGLSAQKTTSKDTLKAKTFTGLKFRNIGPA
                     LMSGRISDIAIHPQNNNIWYVCAGSGGVWKTTNSGTTWTPIFDGQKVYSIGCVAVDPN
                     NPHIVWVGTGENVGGRHVGYGDGIYRSNDDGNSWKNMGLSESQHISKIIVHPENSDII
                     WVAAQGPLWSKGGDRGLFKSIDGGKSWNKTLGDEEWTGVTDISIDPRNPELMYAATWQ
                     RGRTVAAYMGGGPGSGIHRSNDGGLTWEKLTKGLPSSNLGKIGLVISPQKPDVIYAAI
                     ELDRRTGGVFRSDNRGSSWSKQSGAVSGATGPHYYQELYASPHQFDRIYLADVRIQVS
                     DDGGKTFRRLKEKNKHSDNHAIAFRKDDPDYLLVGCDGGVYESFDLAENWRFMANLPL
                     TQYYKLAVDDAMPFYNIYGGTQDNGTQGGPSRTDNRSGITNADWVMTLFADGHQPATE
                     PGNPNIVYSEWQEG"
BASE COUNT         2072 a         1085 c         1134 g         2247 t
ORIGIN      
        1 cttttttaat ctcatgcaat tcattcaccc gcctggtagc ttcttcagga ttataaaatt
       61 cataaggatt agcatctttg aatttgtagt tttctaaagt gctgatccat aaactatatc
      121 ctgaatttac agatgccagg ttaataaagc tgtgtttcga aaaatatgat ttgctttggg
      181 taattggaat ttcatttata ccccctctta tacctaaaaa taacattgtt gatacaatca
      241 gaaaaaacag actgctgaaa ataacattac gtggtgtctc atttatctta acaaaaacaa
      301 atttcctata gaaccagtaa ctgataacga cctgtaaaat caaaatgaaa atcaggatga
      361 aaaaagttga agtggatgtt gagttataaa tttcatcagg atttgacaga taattaagag
      421 ctttaaattg tagctttgtt ttccactcat catatattcc aatttctgct gttgtaatta
      481 gtatatatgc aacaaggact aaaaacgtgt aagctaaatt cgtgtagttt agccacttag
      541 tagtaataac tgtttgtatt aaaaggataa taatcggaat aattaatata taacaggcag
      601 ttgcaacatc aagaggtagt gcataccaga atgatgcaaa aatttcgctt atctcaattt
      661 tttcaatttt aaatatccct gaataatata cgaagaaaac agccctggac attgcaaata
      721 ttatcatcca gaaaagaaat tgtttaatta ttgagattgt aaacttcatt tttattgaat
      781 aggaaaagtg tgcaaatata gtgaatcgtg agtggtgaat tgggaatagc aagaggctgt
      841 tgccttctgg aaaaatacta aatatccgga tggatccttt tcgtcaaata tcgaatacct
      901 ttaaaaggaa tatagcctag ctttttaaat gccttaaacg attcattatt atagccctct
      961 atttgacagg caaatattcc gatcccttgt tcaataagcc aggcttctgc tgattcaacc
     1021 agcttgcgcg caataccttt gtgtcgataa tcaggaataa ccacaacccg atttatccaa
     1081 ccttttctac cgtcatgagt tgctaaaaca gacccaacat acatgtcgtc gacttgcgca
     1141 aacaaaaata agctacaatt attatctact tctttttcaa tactcttacg gctatcacga
     1201 ccaagtggtt tgtacgatag cccaccagtt tcccataaat taattagggt atcgtagtcg
     1261 ccacgcttat atttggtaat tataagtttc atggtaatgt catctgttgg tatcttaaga
     1321 aatctttgtc attcttcgct atgcgcagaa agacaaacaa aattttcctt tcttaataaa
     1381 aaacaacctc ggtctgcgga tgcgatattt taaattcctc aactctactg ctcctaattg
     1441 atgtattata acactgtagt agcattaatt tcgacaattc tattattggt tttaaacttt
     1501 taattcgtgt attatttatg tataattttt caagattatt tagaccttga atgtatttta
     1561 atgatttcat ccgggtgccc gcaatattta atgaaattaa tcttttcaaa cctgaaattg
     1621 gttctaagtc ctcaactgaa gtgttttcaa ttgacaattc ttcaagtccc gtgagtttat
     1681 ttatgagccc aagatcaaag atagggttac tggaaatatt tagttttttc aaacctgtaa
     1741 gtgacgtaat tggtgaaata tcagttatgg atgtattact tactgttaac tgttctagtc
     1801 ttacaaaaat atgcaatggt gttaaattat tcaacgatac attatttttg atttcaagtg
     1861 ctgttaaatc taccagttcc tgtaactctt catttgaagg atttgctgat aagttaaact
     1921 gatcaataaa catctgttcc catactgcat caaggttatc ccaccacagt cttaattttt
     1981 gactttgata aattatcaaa catgaattat gcatgttttt aaaacttagt gcttttgccg
     2041 cttttatttt tgatttatca caataaatta tctcaagaaa attagagcca gaaagaggct
     2101 taagttcatc tatttcagta ttttcaaaac ttatttgttt taaattatgt aatgaagaaa
     2161 gtggctcaag tgtgtttaca tttgtttcgt tcaaattaag tgtttccagg ttattaagtc
     2221 ctgacagtgg agttagatca gaaatagaag tgttctgaat atctaattct tcaagcctgt
     2281 gcaacattct taatggctgt agcgaatgaa tattcctatt gtaggcaacc gacaagcttg
     2341 tttgatttat tagttgatgc aatttttcct ttgtaacagg aggggttatg ctaaatttgg
     2401 ttctgaaaat atctttccat tcaactgtta acgcgttcca ccaattaata agttcctgcg
     2461 aattataaat aacaaggcac tgtgggtttg catccataaa cctatttgct tctgccatag
     2521 taacattgct attatcgcaa taaattactt ttaacagact taagttgctt aacggattga
     2581 gatcggcaat tgatgtatta tttgcttgta atattgaaag gtcagtatag tatgaaatcg
     2641 gctgcagatt ataaatatgg gtgttgtcaa tattcaagtt ttggaggcta attagtgagt
     2701 cgattgttgt aagagtcttt acttttgtat tggagatatt taaatcagaa agcgaactta
     2761 gattattaag tgggctaagg ttggtaacat tagtttttga aatttttaaa tgagcgagtt
     2821 tatttagtcc ccttaatgca tccaaacttg taatacttga attggataaa tctagttcac
     2881 tcaattcttc catatttgaa agaataccaa tcctttcaat tgatgtattc gagcagtaaa
     2941 gctccttcat tgttgtcaca taccttaagg gttcaagagc tgtaactggt gatccagaac
     3001 aattaaatat ttcgagtttg tttaggtttc ttattggaga taagtcttca attaaagtgt
     3061 ttgaaatatt tatctctaca agatccgtaa gttcagaaac aggtataaga tttcttataa
     3121 tcaaattgtc cgataaatca attcttctta tacttttgag ggtattcaaa attctgtaaa
     3181 tagttgaagt gtttaccttt attgtatcga gaaccataac cgatccagtt tcataaacga
     3241 ttaaagctgt atcgcctgca agcaaaacag gatcagtatt tatatcgtcg acaacaataa
     3301 ttgtatcggc cgaaaccacc tctgcccatt tcattgtaat aattgtacta tcagaaaact
     3361 cgattatatt tttaaacgga agtgtatcat aaacgataat cgatttccca aaaaagttct
     3421 tccaatcagt gggcatattg ttccaccaat attttagctc ctctttctcc ctaactttgg
     3481 ttgtataaat gctggcgatt tttaaatccc tttgcaaagg atcgaggtta atctcaataa
     3541 aacgaagctg attattatta acagtatcgt tatttacagt tattccttca agatgccggt
     3601 ttaatgtaaa tttaaaaaca ataacaccgc tgtcagttac cagttgttcc gttttttcta
     3661 tttcaaagcc aaaatttact tttttgtaga aaaaatcaat atcttttaaa tatgcctgaa
     3721 cgtctttatt aagaggtaat ttgcgatttt catcaagatc atcttctatc tgtactttat
     3781 cacttgcaaa aattttaaga aagctgttat ttataatcat atccttgtca gacggtaatt
     3841 cattagggtc gcctaaaaag ttcactgttc cttccagata gctgataagc tgtttacttt
     3901 ggtctgaata atgattgatt tgttctaatg ttaaagtgct gtcgctttgc gcaatacagt
     3961 aacttgaaaa aaatattata tagaagatag caactataat taatttgatc tgcatagttt
     4021 atatgttcta attagttctt ttttatcatc ctccttaaca tatataaggt tagaaatcaa
     4081 ccaccctgaa tttgtgctat ttctgttata atacgacaat tcaaaatacc aatttttgat
     4141 ttgaaaaaag tgaaatttca cgttatcaat ttgtttaaac ttcaatttac ctgttttcac
     4201 taagtaaaag aaaagtgtga gataatcagg ttgataattt gtggatgcaa aatattcaat
     4261 ttggtattca ttttcaagcg ctttatgtag gttcataaaa tcaagttcat gactttgggg
     4321 gtgaaggaag tgctttttct gataaccagt atcaactttc ggaaataatt tgctcaagct
     4381 tcggtaatac acattgctca atatccattt tgaaccgaga ttttctggct ctaaagttaa
     4441 aaatagtatt atgttttcat caatcccgtt agctgtaaaa gttgccgaaa cttcagcata
     4501 ccagtctcta tctaaaaaat tcaagtatat cggcgtgtct tcatttgtaa catcactaat
     4561 aaaatattgt ttaagatttc cggatgttct tggatttaac ttatcaaaca tacctggaag
     4621 aatttgtttt ctcagcttgt tattgtgaaa tctgctgtcg gttttcacaa gtaatttgcc
     4681 aatttgatct tcttccatat taaagcggtg aacaaactgc cctacctgtt tattcatagc
     4741 ataaaatatg gtttcatctt cagtaaattc gttaatcgtc tggctataaa cagatgaaac
     4801 aatagctata aaaattgtaa ttaataaaat taatcttcgc atattttaag tgttggctca
     4861 tctgccttgc tccctaaatg ccattatggt ataatgtaaa agcaaggcgg gagtgcaaat
     4921 ttagtttatt attaaaaacg gttggaaaga caaataagta tactgctata gccaagctat
     4981 catgtgaaaa ttaattaaat ctagtttgtt gttttctata tacttatcta tctgatatga
     5041 ttataatatt gaaaacattc aatcaacaag actattcctt gatttaagcg acctattcaa
     5101 ttttactata tttggtctct catacttgca caaacttact attccatgaa aaaacttatt
     5161 acattaattt ttatgctagg tttacttata ggcctttcgg ctcaaaaaac cacttcaaaa
     5221 gacactctta aagccaaaac atttacaggt ttaaagttca gaaatattgg ccctgcattg
     5281 atgtctggcc ggatatcgga tattgccata catcctcaaa acaataacat ctggtatgta
     5341 tgtgcgggat caggaggggt ttggaagaca acaaattctg gaaccacatg gactccaatt
     5401 tttgatggcc aaaaagtata ttcaattggt tgtgttgctg tcgatccaaa taatccacat
     5461 attgtttggg taggtacagg tgagaatgtt ggtggacgcc atgttggtta tggggatgga
     5521 atatatcgta gcaatgatga cggtaactca tggaaaaaca tgggattaag tgaatcgcag
     5581 cacatttcaa aaataattgt tcaccctgaa aattctgata taatttgggt tgccgctcaa
     5641 ggtcctcttt ggtctaaagg tggtgatcgt ggtttgttta agtcgattga tggtggaaaa
     5701 tcatggaata aaacacttgg cgatgaagaa tggactggtg ttactgatat aagtatcgat
     5761 ccacgaaacc ctgaattaat gtatgctgct acatggcaac gtgggcgtac tgttgcagct
     5821 tatatgggtg gtggtcccgg atcaggtatt caccggtcaa atgatggtgg tcttacatgg
     5881 gaaaaactta ctaaaggtct tcccagctca aatttaggta aaataggact tgttatttct
     5941 ccacaaaaac ccgatgtaat ctatgcagcc attgaacttg atcgacgcac gggtggagta
     6001 ttccgttcag ataatcgcgg ttcatcatgg tccaaacaat ccggtgcagt ttcaggagct
     6061 acaggtccac attattatca ggaactttat gcaagtcctc atcagtttga taggatttat
     6121 ctagccgatg taagaatcca agtctctgat gatggaggaa aaacttttcg gaggttgaag
     6181 gagaagaata agcattcaga taatcacgca attgcatttc gaaaagatga tcccgattat
     6241 ctgcttgttg gttgtgatgg gggtgtctat gaaagtttcg accttgcaga aaactggcgg
     6301 tttatggcaa atttgccact cacgcagtat tacaaattag ctgttgatga tgctatgcca
     6361 ttctacaata tttatggtgg cacacaagat aatggcaccc agggggggcc ctcccgtaca
     6421 gataatcgaa gcggtattac caatgccgat tgggttatga ccctttttgc agatggacat
     6481 cagcccgcta cagagccggg aaatccaaat attgtttatt cagaatggca agaaggta
//
LOCUS       DASCQP010000552         3032 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002001775, whole genome shotgun sequence.
ACCESSION   DASCQP010000552 DASCQP010000000
VERSION     DASCQP010000552.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3032)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3032)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3032
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002001775"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            103..1275
                     /locus_tag="QF480_09450"
     CDS             103..1275
                     /locus_tag="QF480_09450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_067495976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HJN06828.1"
                     /translation="MNQGKYVFAQINNFVIRYEFDKCVDRYQGNYRIRDFSCWSQFLC
                     MMFGQLTHRESIRDIAICLKAHQNKIYHIGIKQVISHSTITRANESRDWRIYADFGKY
                     LIDLVRPLYTDDKDFSIDLDNTVYALDSTTIDLCLSVFPWAKFRKNKVAVKMHAVIDL
                     RGNIPVFIDITDGKVHDVNTLDLIDFEPDAFYVMDKAYVDFERLYDIEICKAFFTIRG
                     KDNLKFKRINSTKVDKSTGLKCDQIIKLTGVKTSKRYPKKLRRIKYWDAENKLLLVFL
                     TNNFIVDALEICMLYKMRWQIELFFKWIKQHLRIKTLWGYSPNAVKTQIWIAICTYLL
                     IALVKKQLKSDLSLYEITQILGVSVFDKTPLNELLTNFSKNERNKINYNQLNMFDL"
     gene            1312..2562
                     /locus_tag="QF480_09455"
     CDS             1312..2562
                     /locus_tag="QF480_09455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06829.1"
                     /translation="MKTNNLLTALLLITVIFLSQIGCNKNNDSDDDTGNGGLGVEAPS
                     TWVSVLIAENAPPALHDDQVTYVEKIVKLAPNLEQIHLRSKNQTALSNQQFANLISLL
                     RNKYGSTLEIGFHPDNSKTSCELWGCGSNDCTSTASWQCVLNKSIILMNTINDIVHKS
                     GETGFTIFSIEQSYVEDVANSLAEIKHCLSGSASALPNVTPASPAVKFGNVLPSYGSS
                     DIYGSDGYDYGYPQYYNLGRHLTDDACALLQKQGSDSPYFPDYSAANCLQSPCPATSG
                     HIFVVDVDTEGAYSDPKIPCLNNTNIQNAYNTLSGGTAGANPTLASACLAYLMTQYPP
                     ITGTVPLNGAEVFITLSGEPSFLGGSGWTLDSINNFHNQLNTNFSTLKTLVPSLFPSG
                     GTDPSALKYAIWNYDDILNNITLP"
     gene            complement(2579..>3032)
                     /locus_tag="QF480_09460"
     CDS             complement(2579..>3032)
                     /locus_tag="QF480_09460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009018720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HJN06830.1"
                     /translation="DCVCSPGIVQNYLNRISGPLMDRIDLHVEVTPVAFDDLSTKSSG
                     ESSNKIRPRVIIARNIQKDRFEKAGNIYCNSQMSSKDIANYCMLNSNGQTLLKLAMEK
                     LNLSARAYDRIIKVSRTIADLGASKDIKNDHLAEAIQYRSLDRDNWGS"
BASE COUNT          971 a          538 c          539 g          984 t
ORIGIN      
        1 tttacaaatt tagtataaat aactttgttt taattaatta caagcgttct ttgatttttt
       61 gatttgaatt cactgacctt tgaggttttt atctctaagg ttatgaatca aggtaagtat
      121 gtatttgctc agataaataa tttcgtcata cgatatgagt ttgacaaatg tgttgatcgc
      181 tatcaaggga attataggat acgtgacttt agttgttgga gtcaattttt atgtatgatg
      241 ttcggacagc ttacgcatcg tgaaagtatc cgtgatatag caatatgctt gaaagcacat
      301 caaaacaaaa tttaccatat tggcatcaag caagttattt cacattcaac aattacccgt
      361 gcaaacgaaa gccgtgattg gcgcatttat gctgatttcg gaaaatacct tatcgacctg
      421 gttagaccct tatacacaga tgataaagac tttagcatcg atttagataa tactgtttat
      481 gcactggact ccacaacaat tgacttatgt ctgagtgttt tcccttgggc aaagttcaga
      541 aagaataagg tagctgtgaa aatgcatgca gtaattgatt tgcgtggcaa cattccagtg
      601 tttatcgaca ttacagatgg taaagttcat gatgtaaaca ctcttgacct gattgatttc
      661 gaaccagacg ccttttatgt aatggacaaa gcatatgtcg actttgaacg gttgtatgat
      721 attgaaatct gtaaagcatt tttcactatt cgtggtaaag acaacctaaa gtttaaacgt
      781 attaattcaa ccaaagtaga taaatcaact gggctgaaat gtgaccaaat aataaagttg
      841 acaggtgtaa aaacttcaaa aagatatccg aaaaaattgc gtaggattaa atactgggat
      901 gctgaaaaca aattgcttct tgtttttttg acaaacaact ttatagttga tgctttggaa
      961 atttgcatgc tatataaaat gagatggcag attgaattat ttttcaagtg gataaaacag
     1021 cacttgagaa ttaaaactct ttggggatat tctcctaatg cagtaaaaac acaaatatgg
     1081 atagcgattt gcacttatct attgatcgcc ttggtaaaga agcaattaaa aagtgatctc
     1141 tctttgtatg aaattacaca aatcttaggc gtgtcagtat tcgataaaac acctttaaat
     1201 gagttactta ccaatttttc aaagaacgaa agaaataaaa taaattataa tcaattgaat
     1261 atgttcgatt tataacgcaa cactagtgtc ctaataacta aaaactcaat tatgaaaact
     1321 aataatttac taactgcatt attactaata acagttatat ttctatcaca aataggctgt
     1381 aataaaaaca atgactcaga tgatgataca ggtaacggcg ggcttggtgt tgaagcgcca
     1441 tctacatggg ttagtgttct tatagcagaa aatgcgccac ctgccctaca tgatgaccag
     1501 gttacctatg ttgaaaagat agtgaaactt gctccaaacc ttgaacaaat acacctgcgt
     1561 tcaaagaatc aaactgcact atccaatcag cagtttgcaa atctcataag tctgttacga
     1621 aataaatatg gttcaacact agaaatagga tttcatccag ataactctaa aactagttgt
     1681 gaattatggg gatgtggaag taatgactgc acgtcaactg cttcatggca gtgtgttcta
     1741 aataaaagta ttatacttat gaatactatc aacgatattg ttcataaatc aggggaaacg
     1801 ggttttacaa ttttttcaat tgaacagagt tacgttgaag atgtagcaaa ttcactcgct
     1861 gagataaagc attgcctttc cgggtctgca agtgcattgc ctaacgtaac acctgcttct
     1921 ccagctgtaa aatttggcaa tgttttgccc agctatggat cctctgatat atatggttct
     1981 gatggatatg attacggata tccacaatac tataacctgg gaagacatct cactgacgat
     2041 gcatgtgcat tactccaaaa gcaaggaagt gattccccct attttccaga ttatagcgcc
     2101 gcaaattgtc ttcaatctcc atgcccagct acatcaggcc atatatttgt tgttgatgta
     2161 gatacagaag gtgcatattc agatccaaaa attccatgct tgaataatac taacatacaa
     2221 aatgcttaca acactctttc cggtggaact gcgggtgcaa atccaacgct agcatctgct
     2281 tgcttagcat accttatgac acagtatcca ccaattactg gaactgttcc acttaatggt
     2341 gctgaagttt ttataacctt atcaggtgaa ccgtcatttc ttggaggctc tgggtggaca
     2401 ttggactcca ttaataattt ccataatcag ttaaatacaa actttagcac acttaagact
     2461 cttgtgccat ctttattccc ttcgggagga actgacccta gtgcgttaaa gtatgcgatt
     2521 tggaattatg atgatattct taataatatt accttacctt aaacaggatg tttaaatttt
     2581 agctccccca gttatctcta tctaggctgc gatattgtat ggcttctgcc aaatggtcat
     2641 ttttaatgtc tttactagca ccaagatcag ctattgttct ggatactttt attatgcggt
     2701 catatgctct tgctgaaagg tttaattttt ccatagctaa tttgaggaga gtttgaccat
     2761 tactatttag catgcaatag tttgcaatat ctttactgct catctgagag ttgcaataaa
     2821 tattacctgc tttttcaaat ctatctttct gaatatttcg tgctattatt actctgggcc
     2881 gtatcttatt gctagactca ccggatgatt tagttgacag gtcatcaaat gctacaggcg
     2941 ttacctcaac atgtagatct attctatcca ttagtggccc tgatattctg ttaagataat
     3001 tttggacaat accaggtgag catacacaat ct
//
LOCUS       DASCQP010000553         3777 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002002686, whole genome shotgun sequence.
ACCESSION   DASCQP010000553 DASCQP010000000
VERSION     DASCQP010000553.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3777)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3777)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3777
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002002686"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            101..1303
                     /locus_tag="QF480_09465"
     CDS             101..1303
                     /locus_tag="QF480_09465"
                     /inference="COORDINATES: protein motif:HMM:NF013736.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HJN06831.1"
                     /translation="MIVPSEYKDEKARQKELDSYSILDTLPEIDYDNLTAIAAEICGT
                     SISLISLIDNQRQWFKSHHGYDSTETPREHAFCAHAINDPKNIFVIQDARLDERFHDN
                     PLVIEDPKIIFYAGVPLVGEKGLPLGTLCVIDHKSKKLSQNQLRSLTALSNQVMNLLD
                     LRKSKKLLEESFSNLEEKNQDLERFAYVAAHDLKSPLIGISGMAQIFSEEYGSKIDEE
                     GKSMLELIKGASNKLRKLIDGLLEYSRCESGLNEKKSKIDLDTLKNEITKLFSYEPGL
                     SIVLRSTITEIYANRTAIDQILINLVANAIKYNDKKITRIEIGVVENDNCYEFYVKDN
                     GPGIEQEDQKKIFGIFEVLTAQDKFGQSGNGIGLATVKKIVERIGGSIKVESELGKGT
                     KFIFTIEN"
     gene            complement(1376..3421)
                     /locus_tag="QF480_09470"
     CDS             complement(1376..3421)
                     /locus_tag="QF480_09470"
                     /inference="COORDINATES: protein motif:HMM:NF014896.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HJN06832.1"
                     /translation="MKQPKAQKIEKQLVKHGHTRIDNYYWLKERENPEVIDYLKAENA
                     YTKEVMKDTEILQEKIYNEIVGRIKQTDISVPYNYNGYSYFIKYEEGKEYPIYCRKKL
                     TKNADDKIFLDGNLLAEGHPYFRIGGWNFSTNNNILAYSVDTVSRRKYDIYFKNIETG
                     KLYNEIISNTTGNVVWANDNSTVYYQVKDNTLRSYRIYKHKIGTNVESDILVYEEADP
                     TFHVWVRKTKSQKYIVISSQSTLSSESRILSADNPDGDFTIFQKRLPDVEYGISHQDG
                     IFLILTNYKAKNFQLMEVGERNTSIENWKVNIPGRDNVLIEGVDVFNDFYVVTERKNG
                     LIEFKIFNTRSNSDYYLDFEEDDYFVTSSTNPDYNSQKLRYIYTSLKTPRTVYDYDMI
                     DHKQTMLKQQEVVGGYNPDDYVTERKYAVSRDGSKVPISIVYKKGYEINGKSPLLLYG
                     YGSYGYSIESTFRSSRLSLLDRGFVFAIAHIRGGEELGRNWYEDGKMLNKKNTYFDFI
                     DCAEYLIAENFTSSDKLFALGGSAGGLLIGAVINYRPELFRGVIAAVPFVDVVTTMLD
                     ESIPLTTSEYDEWGNPNEKEYYDYMLSYSPYDQVEAKDYPAILVTTGLHDSQVQYWEP
                     AKWVAKLRDMKTDDNILLLKTNMDFGHGGASGRFEQHKETALEYAFMLMLLENDNYN"
BASE COUNT         1266 a          675 c          588 g         1248 t
ORIGIN      
        1 ttgatcatct tctacctcga gatggttatt atgtagaact tccaaaggaa tctacaagaa
       61 agaagaaaaa aaacaagaag aaataatatg taattaaatt atgatagtac cttcagaata
      121 taaggacgaa aaagcaagac aaaaagaact ggattcatat tccattctcg atactcttcc
      181 cgaaatcgat tatgataatt taactgcaat tgcggcagag atatgcggca catcaatttc
      241 tttgataagc ttaatagaca accagcgaca gtggttcaaa tctcatcatg gatatgattc
      301 taccgaaaca ccaagagaac atgccttttg tgcccatgca attaatgatc ctaaaaatat
      361 tttcgtaatt caagatgcca gattagatga acgcttccat gataatccat tggtaattga
      421 agatccgaaa attatttttt atgctggtgt tccattggta ggagaaaaag gattgcctct
      481 tggaacttta tgtgttattg atcacaaatc taagaaacta agtcaaaatc aattgcgctc
      541 attaactgca ctttctaacc aggtaatgaa tctactagat cttagaaaat ctaagaaatt
      601 attggaagag tccttttcta atttagaaga aaaaaatcaa gacctagagc gctttgctta
      661 tgttgccgca cacgacctca aatccccatt gattggcata tcaggaatgg cacaaatttt
      721 ctcagaagaa tacggttcaa agattgacga agaaggaaaa tcaatgttag aattaatcaa
      781 gggtgcatct aacaaactta gaaaactgat agatggtttg cttgagtata gtagatgtga
      841 gagcgggttg aatgagaaaa aatccaaaat agatctggac accttaaaaa atgaaattac
      901 taagcttttc tcatacgagc caggattatc aattgtgttg agatcaacaa taactgagat
      961 ctatgctaac aggacagcca ttgatcagat tcttataaac ctagtagcta atgcaattaa
     1021 atacaacgat aaaaagatta ctagaattga gattggagtt gtagagaatg ataactgcta
     1081 tgaattctat gtaaaggata atggaccagg aatagaacaa gaagatcaga aaaagatctt
     1141 tggcatattt gaagtattaa cagcacagga caaattcggt cagtctggaa acggaatagg
     1201 tttagcaact gtgaaaaaga ttgtagaaag aattggaggc tcaataaaag tagaatctga
     1261 gcttggaaag ggtactaaat tcatatttac tattgagaat taatgcttgt atctgctaaa
     1321 ttcaagaagc ttttatcttg ttcttaaccc tcgttaccta ataacaattc acaaattaat
     1381 tataattatc attttccagc aacatcagca taaatgcata ttctaatgct gtttctttat
     1441 gttgttcaaa acgacccgat gctccgccat gaccaaaatc catattggtt ttaagtaaca
     1501 ggatattatc atcagttttc atatcacgta atttagcaac ccatttagca ggttcccaat
     1561 attgcacctg actgtcgtga agacctgtag ttacaagtat tgccggataa tcttttgctt
     1621 ccacttgatc ataaggtgag tatgatagca tgtaatcgta atactctttt tcgtttggat
     1681 taccccattc gtcatattcg ctggttgtta acggaatact ttcatccaac atagtagtaa
     1741 ctacatcaac aaaaggaacc gcggcaataa cacctctaaa taattcgggg cgataattaa
     1801 ttactgcacc aatcagaagt cctcctgcac ttcctcccaa cgcaaataat ttatcgctgg
     1861 aagtaaagtt ttcagcaatt aaatactcag cacaatctat aaagtcgaaa taagtattct
     1921 ttttgttgag catctttcca tcttcatacc aattgcgacc aagctcttct ccaccacgga
     1981 tatgagcaat tgcaaataca aatcccctgt ctaataaact taaccgtgat gatctgaaag
     2041 ttgactcaat actataacca tacgatccat acccataaag taataacggt gactttccat
     2101 taatctcgta tcctttttta tagactattg agattggtac tttagaacca tcgcgagaaa
     2161 ctgcatattt tctttcagtt acataatcat cgggattgta tccaccaaca acttcttgct
     2221 gcttcaacat agtttgttta tgatcgatca tatcataatc ataaactgta cgaggtgtct
     2281 ttaatgaagt gtagatgtat cttagctttt gagaattata atcgggatta gttgatgaag
     2341 taacaaagta gtcatcctct tcaaaatcca aatagtaatc gctattactt cttgtattga
     2401 atatcttaaa ttcaataagt ccattttttc tttcagtaac aacgtaaaaa tcattaaaca
     2461 catcaactcc ctctatcaat acattatccc ttccaggtat attcactttc caattttcaa
     2521 tactcgtatt tctttctcct acttccatca attgaaagtt tttggcttta taattagtga
     2581 gtattaaaaa tataccatcc tgatggctaa ttccatattc aacatcaggt aatcgcttct
     2641 gaaaaatagt aaaatcccca tcaggattat cagcactaag aatacggctc tcagatgaca
     2701 atgtactttg tgaacttata actatatatt tttgagactt agttttgcgt acccacacat
     2761 ggaatgtagg gtcagcttct tcataaacta gtatgtcaga ttcaacattt gtgccaattt
     2821 tatgtttgta aattctgtat gatcttagcg tattatcttt cacctgatag tagacagtgc
     2881 tattatcgtt agcccatact acatttccgg ttgtgtttga tattatctca ttgtagagtt
     2941 tgcctgtttc aatattcttg aaataaatat catatttcct acgacttact gtatcaacac
     3001 tgtaagctaa gatgttatta ttagtactaa aattccaccc gcctattcgg aaataagggt
     3061 gaccttcagc taaaaggtta ccatcaagga atatcttgtc atcagcattt tttgtaagtt
     3121 tcttccgaca atatatagga tattctttcc cctcttcata ttttataaag tacgaatatc
     3181 cattataatt atacggtaca cttatatctg tttgctttat tcttccaaca atttcgttat
     3241 agatcttctc ttgtaatatt tcagtatctt tcattacctc ttttgtataa gcattttccg
     3301 cctttaggta atctatcact tcggggtttt cacgctcctt aagccaataa taattatcaa
     3361 tacgagtatg accatgcttt acaagttgct tctctatttt ttgagctttg ggttgtttca
     3421 tagtacttgt atttaattgt tggcacgaaa ccaatgtaac cgaagctaca aataaaagtg
     3481 taattcttaa aattaaattc atttattata ataatttgag aactgaattg ttaggtcaaa
     3541 acaaaatatt tatgtgtagt ggacaaggaa atattaatat tagatcaagc tttcatactt
     3601 acatttttca cccttgatct aaaagtagag actaaatcca aaactgggca tgaatggtaa
     3661 ctggtatact ttttcgtttg ttacaatatc tacataaaaa atattttcac gatcgtatac
     3721 gtttgtgata cttaaatcta gcaccaattt agtatttgca cttaggtaga aatttct
//
LOCUS       DASCQP010000554         1997 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002013599, whole genome shotgun sequence.
ACCESSION   DASCQP010000554 DASCQP010000000
VERSION     DASCQP010000554.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1997)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1997)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1997
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002013599"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            56..>1997
                     /locus_tag="QF480_09475"
     CDS             56..>1997
                     /locus_tag="QF480_09475"
                     /inference="COORDINATES: protein motif:HMM:NF037660.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HJN06833.1"
                     /translation="MSIKILQFKDLLRQHADKHISWLYTFKKLLVLIVVAATISSTAQ
                     DFSRIDSLQQNIQNDSIFNLRDRLNFTLRLIDIFSDSNIEKADNYTLSAIDLTEQLND
                     STKLISLLMQYAESKSDQCNYLDANKAYQEVKDIILKSGSGKEKANIYYSIGINFFDW
                     GKYIESQKYFDKALEEYSAIKDKKGIALSLTELSSIASNFSNYVQAIGYMQRARDIYI
                     EIDDLNNLAHSNQRLGVILEKWSEVDRALDYYTQAYNHFAEENNQFEKMQLLYHIGNI
                     YLKQYEFGKALDNYNQAIRLDSEVNNKKLLSIGYNNIGKTYFAMKEYDTALFYQEKAL
                     TIKYEVDDKKHIAISNLNIGVIYFAINNLTLAEESALQCLQLANENKLKEIEMEALEL
                     LSEINGSKGNYNKSYDYLEQYIELNDEVFSTESQTMINDLLIRYQAEKFEKENEILKQ
                     NEAISNLELERGKDTTLFTIILLVFIIILALIIIFFINSRTVQSKRNYSVLAKKNKEI
                     TNQQEKLSNLNKELVSSREQYRSIVENATIGMYQTLPNGKIKFANIGLINMLEYNNFS
                     ELSDTNLNKDHKNREAFINLLEKNKVVSGREDIWTRRDGTSMYVNESAWIVTDNNGET
                     KHYEGIVEDISKRKEAEIALKDS"
BASE COUNT          782 a          293 c          326 g          596 t
ORIGIN      
        1 ttactaaagt tagctttagt ttgagtattt atacagctca tcaatcaaaa ccataatgtc
       61 aatcaaaata ttgcaattta aagatctgct cagacaacat gctgataaac acattagttg
      121 gctttataca tttaaaaaac tcttagtatt aatagtagtt gctgcgacaa tctcctcaac
      181 agctcaagat ttctcaagaa ttgatagttt acagcagaat attcagaatg attcaatttt
      241 caatctacga gaccgcttaa attttacatt acggctaatt gatatttttt ctgattcaaa
      301 tattgaaaag gctgataact acactctttc agcaattgat ttgactgaac aattaaatga
      361 ttcaacaaag cttatttcgc ttttgatgca atatgcagaa agcaaaagcg atcagtgcaa
      421 ttatctggat gctaataaag cctaccagga agtaaaagat ataattctga aatcgggctc
      481 cggtaaagaa aaagcaaaca tttattactc aattggtatc aatttctttg actggggtaa
      541 atacatcgaa tcacaaaaat actttgacaa agcactcgaa gaatattcag cgataaaaga
      601 caaaaaaggt atcgccttat cactaactga actgtcctca attgcatcaa attttagtaa
      661 ctatgtgcag gcaataggtt atatgcaacg tgcaagagat atctacatag aaattgatga
      721 tctcaataat ctcgctcatt caaatcagag acttggtgtt attttagaaa aatggtcaga
      781 agttgatcga gcattggatt actacacaca ggcatataat cattttgctg aagaaaataa
      841 ccaatttgag aaaatgcaat tgttgtatca tattggaaat atatatttaa aacaatatga
      901 gtttggcaaa gcactcgata attataatca agcaataagg cttgacagtg aagttaataa
      961 taaaaaacta ctttcaattg gatataataa tattggcaaa acatattttg ccatgaaaga
     1021 atacgatact gctttatttt atcaagaaaa agctcttact atcaaatatg aagttgatga
     1081 taaaaagcac atagcaatct ctaatcttaa tattggagta atatattttg ctatcaataa
     1141 ccttacccta gctgaagaaa gcgcactgca atgtcttcag ttagcgaatg agaataaatt
     1201 aaaggagatt gaaatggaag ctcttgaatt gctttctgaa ataaatggat caaaaggcaa
     1261 ttataataaa tcatacgatt acctagaaca atacattgag cttaatgatg aagtttttag
     1321 cactgaaagt cagactatga ttaacgacct tttgataaga tatcaagctg aaaaatttga
     1381 aaaagaaaat gaaatactta agcaaaatga ggctatctct aatctcgaat tggagagggg
     1441 aaaagacact accttgttta caataatatt actagtattt ataattatcc tggctctaat
     1501 aataattttc tttattaact caagaaccgt ccaaagcaaa agaaattatt ctgttttagc
     1561 caagaagaat aaggaaatta ctaatcagca ggaaaaactc agtaatttaa ataaggagct
     1621 tgtttctagt agagaacaat atagaagtat tgttgagaat gcaactatag gcatgtatca
     1681 aacacttcca aatggcaaaa taaaatttgc caatattggt cttattaata tgcttgaata
     1741 taataatttt tcagaactaa gtgatacaaa cctcaataaa gatcataaaa accgtgaggc
     1801 ttttataaat ttacttgaga agaataaagt agtatctggt cgtgaggata tttggacccg
     1861 aagagacggt accagtatgt atgtaaatga aagtgcctgg attgtaacag ataataatgg
     1921 agagacaaaa cactacgaag gaattgtaga agacatttca aaacgaaaag aggccgaaat
     1981 agctttaaaa gattctg
//
LOCUS       DASCQP010000555         2686 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002015094, whole genome shotgun sequence.
ACCESSION   DASCQP010000555 DASCQP010000000
VERSION     DASCQP010000555.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2686)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2686)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2686
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002015094"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..530)
                     /locus_tag="QF480_09480"
     CDS             complement(<1..530)
                     /locus_tag="QF480_09480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019540882.1"
                     /note="NADH-dependent; catalyzes the conversion of
                     pyrimidines to 5,6-dihydro compounds in pyrimidine
                     degradation; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropyrimidine dehydrogenase"
                     /protein_id="HJN06834.1"
                     /translation="MENIAEYLKAERSQDWRVEIRKGIKTKERVGMIRANMPEEDPNI
                     RNQSVIEVNKGLTFDQAVAEAQRCIDCPDPTCMTGCPVGINIPKFIKKIESKDILGAA
                     AVLKETNGLPAVCGRVCPQEKQCELTCFYTKKMDAIPVAIGFLERFAADYERNSGEMS
                     IPKTDKSNGIKVAVIGS"
     gene            complement(530..1366)
                     /locus_tag="QF480_09485"
     CDS             complement(530..1366)
                     /locus_tag="QF480_09485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013446312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfide/dihydroorotate dehydrogenase-like
                     FAD/NAD-binding protein"
                     /protein_id="HJN06835.1"
                     /translation="MSKILEKEFFSKNVVKLVLDAPEIARSRKPGHFVIIKIGVKGER
                     IPLTIAGSDIENGTITLVVQTIGVTSSKLAAFEVGDIVTDVVGPLGEATHIEKVGTVL
                     CAGGGVGVAPLLPIVEGFKKAGNKVITVLAARNKDLVILEEQMREFSDEVIIMTDDGS
                     SGKKGLVTAGMEEVINREKVNLAVTIGPAIMMKFAALTTKKYNIPTLASLNTIMVDGT
                     GMCGACRVSVGGKTKFVCVDGPEFDAHQVDFDQMLMRLGAYKNQEHEAYQKYLKTVET
                     VA"
     gene            1793..2587
                     /locus_tag="QF480_09490"
     CDS             1793..2587
                     /locus_tag="QF480_09490"
                     /inference="COORDINATES: protein motif:HMM:NF023828.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3667 domain-containing protein"
                     /protein_id="HJN06836.1"
                     /translation="MDTINEIECKNCGNHFQGLYCNKCGQRVIKERNTVKHFFDLIFD
                     SFDVKRGVLYTCKLLFINPGKLVNEYLDGRTKDYYNPLRYLIIISGLFAIFMIGFDVL
                     DKNIETTNELLELKNSDLKLQTILIAYERRYLNIFTLLLLPFYSLISKWVFKKYKLYY
                     AEHLIINSFLFAQHTLIQILVIFVILFIPGLSKLLLVTGVVVFISYYTYALRGVFKIK
                     FFRSLLSSATIFVLGVLSIQLLLFIVAILTILALKFFGVNLKELIQ"
BASE COUNT          838 a          489 c          390 g          969 t
ORIGIN      
        1 gatccgatga cagcaacttt tatcccattt gacttgtcag tttttggaat tgacatctcg
       61 ccactgtttc tttcataatc agcggcaaac ctttccagaa atccaatagc aacaggtatt
      121 gcatccattt tttttgtgta aaaacaagta agctcacatt gcttttcctg aggacaaaca
      181 cgcccgcaaa cagctggtaa tccattagtt tctttaagaa ctgctgctgc tccaagtatg
      241 tctttacttt ctatcttttt gataaactta ggaatattga ttccaaccgg gcaacctgtc
      301 atacatgttg gatcgggaca gtcaatacat ctttgagctt cggctacagc ctgatcgaaa
      361 gtaagtcctt tatttacttc tataacactt tgatttctta tatttggatc ttcttcaggc
      421 atattcgcac ggatcatacc tacgcgctcc ttggttttaa taccctttcg aatttctact
      481 ctccaatcct ggcttctttc agccttgaga tattctgcta tattctccat tatgcaactg
      541 tttcaactgt ttttaaatac ttctgataag cttcatgctc ctgattcttg tatgctccta
      601 atctcattaa catctgatca aaatcaacct gatgagcatc aaattcggga ccatcaacac
      661 atacaaactt agttttccca ccaacactta cacgacaagc accacacatt ccagtaccat
      721 caaccataat tgtgttaagg ctggccaacg ttggaatatt gtattttttt gtggtaagag
      781 cagcaaattt catcataatt gctggtccga tagttacggc aagattaacc ttttcacgat
      841 tgataacctc ttccattcct gctgttacca gacctttttt tccagatgat ccatcgtcag
      901 tcataataat tacctcatca gaaaattcac gcatttgctc ctcaagtatt acaaggtctt
      961 tatttctagc cgcaagaact gttataactt tgttacctgc ttttttaaac ccttcaacaa
     1021 tcggtaacaa gggtgcaact ccaacacctc cacctgcaca aagtaccgtt ccaacctttt
     1081 cgatatgggt cgcttcacct agaggtccta caacatcagt tacgatatct ccaacttcaa
     1141 aagctgctaa ttttgatgaa gttacaccaa tagtttgtac tacaagtgtt attgttccgt
     1201 tttctatatc agacccagca attgtgagag gtatcctctc tccttttacg ccaattttga
     1261 taattacaaa gtggcctggt tttcgagacc ttgcaatttc aggggcatct aataccagtt
     1321 ttacaacatt cttagaaaaa aactcctttt caagtatttt gctcatattt attattttat
     1381 tatcctgttt ttaaataatg aagagatcag gtgtgtaacc tttgagtaat acttttcaat
     1441 cctaatctca ttcagaatat tgaaaatttg agccggtaaa aatactaaat ataacatggc
     1501 ataattggtt aatacaaagg ctagtacact aaatgcagta aatcaattaa ttaaatattt
     1561 aatttatatt aaatctaatt tccaaataac tattactgaa cgtattactg catatataga
     1621 gtcgattgaa tgaactgctt tgtacttcta actattcact aatttaagct cattagattt
     1681 ttgaattatt tcagaataaa aaatgatttt cccctttata aaatattaat ggtatatatt
     1741 tgatattttt ctgttatact aatattcttt gcaaaagatt gaaaaagata aaatggatac
     1801 aataaatgaa attgaatgta aaaattgtgg aaaccatttt cagggtttgt attgcaataa
     1861 atgtggacaa agagttatta aggagagaaa taccgtaaaa catttttttg atttgatttt
     1921 cgatagtttt gatgtcaaaa gaggtgtact ctacacttgc aaattattat ttattaatcc
     1981 tggcaagtta gttaatgagt atttggatgg cagaacaaaa gattattaca accctcttag
     2041 atatctgata ataatctccg gtttgtttgc catatttatg atagggtttg atgtactgga
     2101 taagaacatt gaaactacaa acgaactttt ggagctgaaa aatagtgatc taaaacttca
     2161 gactatacta atagcatacg aaaggagata cctgaatatt tttacactat tgttgcttcc
     2221 cttttatagt ctgatctcaa aatgggtttt taaaaaatac aaactctact acgctgaaca
     2281 tttaatcatt aatagctttt tgtttgcaca gcatacatta atacagatac tagtaatttt
     2341 tgtgattttg tttattcccg gattatctaa attattactt gttaccggtg ttgtagtgtt
     2401 tatttcatat tatacatatg ctttgagggg tgttttcaaa attaaatttt ttagatcatt
     2461 attaagttca gcaaccattt tcgtacttgg agtactttct attcagttgt tattatttat
     2521 cgtagctatt cttacaatac tagcattaaa gttttttggt gtaaatttaa aagaattgat
     2581 tcaataatta ttagtcatat ttaaaaacta gatattggga gaaagttttt taataaaatt
     2641 cacaattttg ttagaactat taacttcgta agactccaac aatttc
//
LOCUS       DASCQP010000556         6443 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002016190, whole genome shotgun sequence.
ACCESSION   DASCQP010000556 DASCQP010000000
VERSION     DASCQP010000556.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 6443)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6443)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6443
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002016190"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1539)
                     /locus_tag="QF480_09495"
     CDS             complement(<1..1539)
                     /locus_tag="QF480_09495"
                     /inference="COORDINATES: protein motif:HMM:NF024816.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat-containing sensor
                     histidine kinase"
                     /protein_id="HJN06837.1"
                     /translation="MRKISLFFCLATILVFNSFCQDLTQSNRFTIDEKTSLLYHQEID
                     SLYLVGDYSEAIDRILILLDYYSQQNDVKGQIICNNYMGDLLRATGKSKNGRKYLQHA
                     IKLNKEVKDSILLAKTYNLFAAIYYELDFPSLLDSATYYATISTDIATRHGDDRILYS
                     NLNILGKVEEGKGNLGKSLEYLYEALEIVRKVKSIDESLVLLNIAKVYWKLGKLEEAE
                     ILAMEAYEMAKKDNIMVYIRLSSLLLEKIYMLTGNYKQAHFFMEQFHFVTRNYLNEKT
                     EKRINALKAQIDQTRNEIKLQKEIEVGQLHTISLFIIIGFALIFIIIFSFQKRKMRVI
                     IRELTGANVEIVNQKEEMEKVAKDLDTSNATLKKFITIMAHDLKSPFNAIIGFSDLLK
                     SEYDNLNNDERKLAIENTYKSSVNALTLLEHLLEWARLQTGRIHMNIEKIDLFDVVEE
                     IVSFKQPSAFLKKQRIESNVSKGLYIKMDRNVILTIFRNLLSNAIKFTPEGGEISINA
                     SEAES"
     gene            2103..2933
                     /locus_tag="QF480_09500"
     CDS             2103..2933
                     /locus_tag="QF480_09500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06838.1"
                     /translation="MRFRKTSILIIAIFFSSYYLAGQWNPTNGPVGGIVNSIIEHNDV
                     VFAASGGNGGIYYLQENQNWKFLFNELPNNNTINALATNSSYIFSAHSLHGIFRSSNM
                     GTNWDEVNNGISTFGKSIISLYTDGDIIYSGSFVDGFYISENNGDSWVMKSNGLSGAA
                     KRIASISKLGGILFISTPLGIYKSEDNADSWVLSSSGIPMDKRYSSAIFSKNNYILAG
                     SIAGLYRSTDNGETWTITGAGVIVNSVEGISEHNGVLYVCANGKVAKSQKMTELHGLT
                     "
     gene            2930..4225
                     /locus_tag="QF480_09505"
     CDS             2930..4225
                     /locus_tag="QF480_09505"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN06839.1"
                     /translation="MSNGLAQFGIVHSILACDEGLFCDFNWLGVFKFDTSNNIWNEFN
                     SGITNLRVRSFCRTGNRLFAVTEDADFGLISYSDDNGETWIKSINGSSQIGYLSIFSA
                     NGMLLAGSFGDYLYTSNNNGASWSHVSHPEFPASYTSSFAENNGVFFAASLFSGSDIY
                     RSFDNASTWEATNTLGQGDIQSVHNSNGILYAGRTDGVFRTSDNGNSWTKASGGLSEI
                     PFIKAIGSDDEYIYTSTTSEGLWRSNNQGDDWELVMNPGLQNYVNAIANRNGYMFVGT
                     KTSGILYSEDHGDTWSDYSEGLLSELENGNIPLVYTLQIKGDSIYCGLNSYGTWVAPM
                     PYVTSVGNYDEDNVSYFYVYPNPAHSQVNIKLESSTSIFCSISIFDLAGRQLLNIQNK
                     LLTIGLNNISLDVSRFNKGVYIIEVSKGSSVAIQKLVVK"
     gene            complement(4245..5468)
                     /locus_tag="QF480_09510"
     CDS             complement(4245..5468)
                     /locus_tag="QF480_09510"
                     /inference="COORDINATES: protein motif:HMM:NF013702.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HJN06840.1"
                     /translation="MSRKKYRLRDILNKAAELYDLDQFSKTSQNLSRSQLKTIKKELK
                     DIAANKKNPLIKLTKFLKPLILPTDKRITLESHLDFSQLHQKKNIVMYMPNHKSHLDE
                     FMLGFTFLENKLSIPITAAGENLFKNRTSNFIMKSYGAFKIRRDKYSEDEHYSRLLSS
                     YLSASVLAGEQIMSFQEGTRPRDGKIGLFRKGIIGTIEKLFNNIKDNPELEIEDIIFV
                     PIAINWSENPDEKKITIDTNTKAEDTDLIKRFINLKKTHSSRDIRGVFIGIGEPVSYN
                     QYIASHNPAENGSYAIGICNQVRSRVVNMMPIFKEHLLYSSIQFLSKYNKHIKVEDFQ
                     QLLLVTQKVISNYEDNIKVIETDGFSVEDRLELMAKRDIIKFSEDKLSFDVLNPNLID
                     YYANHVTSLTEERDR"
     gene            5674..>6443
                     /locus_tag="QF480_09515"
     CDS             5674..>6443
                     /locus_tag="QF480_09515"
                     /inference="COORDINATES: protein motif:HMM:NF024827.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multiheme c-type cytochrome"
                     /protein_id="HJN06841.1"
                     /translation="MTYLSMHNEPLILQKHLFKIFKLFLLIPIIYSCSGPESMNNYVY
                     QPVYLNHNDTVKYTGIESCKECHYHNYISYLRTGMGLSFDSATKLKSASVIGPDSILY
                     DSDNDLYFHPYWDGKIMKVKEFRLEGADTLHSRIQTVDYIVGSGQHTNSHIYIINNYA
                     YQIPFTYYTQDQKFDFPPGFEGRYNSRFSRKIGLECLSCHNSFPEMVMGSENKYTYIP
                     DGINCEQCHGPGEIHVKLKKEGVIVDTSQFIDYSIVNPV"
BASE COUNT         1979 a         1091 c         1120 g         2253 t
ORIGIN      
        1 actttctgcc tctgaggcat tgatactgat ctctcctcct tctggtgtaa attttatggc
       61 attagagaga agatttcgga aaatggttag tatgacgttc ctgtccattt ttatatacaa
      121 acccttagaa acgttacttt ctattcgctg tttttttaag aacgcggaag gctgcttaaa
      181 gctaacaatt tcctctacta cgtcaaacaa atcaatcttt tcgatattca tgtgaattct
      241 acctgtttgc aatcgagccc actcaaggag gtgctcaagt aaagtaagag catttacaga
      301 agatttatat gtattttcaa tagctagttt tcgctcatca ttattaagat tgtcatactc
      361 cgatttaagt aaatctgaaa acccaataat agcgttgaat ggactcttca aatcatgtgc
      421 catgatagtg ataaattttt tcaatgttgc atttgatgta tccagatctt tagcaacttt
      481 ctccatctcc tctttctggt tcactatttc aacgtttgct cccgtaagtt cccttattat
      541 gacacgcatt ttgcgctttt gaaaggaaaa aattatgatg aaaatcagtg caaatccaat
      601 gataataaaa agggaaatgg tatgtagttg tcctacctct atctctttct gaagtttaat
      661 ctcattacgg gtttgatcaa tctgggcttt taacgcattg atccgtttct ctgttttttc
      721 gtttagatag ttccgtgtta caaaatgaaa ctgttccata aaaaaatgtg cttgcttgta
      781 atttcctgtt agcatataga ttttctcgag cagtaacgac gacaagcgaa tgtaaaccat
      841 tatattatct ttttttgcca tttcataggc ttccatagcc aatatctcag cctcttcaag
      901 tttacctagc ttccagtaaa ccttagcgat atttaacagg accagagact catcaatcga
      961 ttttactttt cttacaattt ccaatgcttc ataaagatat tcaagggatt ttcccaagtt
     1021 tccttttccc tcctctactt tccccaggat atttaagttg ctgtagagaa tcctatcatc
     1081 tccatgacgt gttgcaatat ctgttgaaat tgtagcataa tacgtggcgc tgtctaacaa
     1141 agatggaaaa tctaattcat aatagatcgc tgcaaataaa ttataagttt tggcaagcag
     1201 aatagaatcc ttaacttcct tgtttagctt tatagcatgt tgcagatatt tcctgccatt
     1261 tttgctttta ccagttgctc ttagtaaatc tcccatgtag ttgttgcaga ttatctgccc
     1321 ctttacatcg ttctgttgtg aataataatc aagcaatatt aagattctat caatcgcctc
     1381 actgtaatct ccaacgagat agagtgaatc tatttcctga tggtataaca gagaagtctt
     1441 ttcatcaata gtaaatctgt ttgattgagt taaatcctga cagaaactat taaaaacaag
     1501 gattgttgcc aaacaaaaga aaagagagat ttttctcatc ataaacttta aagaataaag
     1561 aggtttgtca aaggtatgga acaaatttta taaaacccta aattagtgaa caaaacttac
     1621 ttagctatat tcttttctag aacactgatt ttcccaagta actttcttat tttcatctcc
     1681 ctaccaacga acattttcaa attatagctg agttccttgt ttttctcttc cagttctttt
     1741 gttttttttt caccagcacc tccaatcggt catgctgtgt cattaattct agctagactc
     1801 tttgagaagt ttgttagatt cttcaagatg tactgaccgt tgaactgtta tcatctcttc
     1861 tggtccaaaa ttacgctgtt agaaaaaggt ttaggggtag aaggaagagg aagtcatttc
     1921 tattaagtag gtaatacaat tgtcataatt cacattcttt aagatgatat gcctggacat
     1981 tattgcccct ttaaaattaa ctttctgatt aaggagattg aaatctttta acacatattt
     2041 aactcgttta cttagataat atatgttatt ttgaattgta gaaatcttca aatcaagcaa
     2101 ctatgcgttt tagaaaaaca tccattttaa taattgccat ctttttttcc agctactatt
     2161 tagccggaca gtggaatcca actaatggac cggttggcgg aatagtgaat agtattatag
     2221 aacacaatga tgttgttttc gctgcttctg gcggaaatgg tggtatttat taccttcagg
     2281 aaaaccaaaa ttggaaattt ttgttcaacg aactgccaaa caataatact attaatgcgc
     2341 ttgctacaaa tagtagttac atcttttcag ctcattctct gcatggaata tttagatcat
     2401 ccaatatggg taccaattgg gatgaagtga ataatggcat atctacattt ggcaaaagca
     2461 ttatatcatt gtatacagac ggggatatta tttattcagg ttcattcgtt gatggattct
     2521 atatttcaga aaacaatggt gatagctggg taatgaaaag taatggattg agtggtgcag
     2581 ccaaaagaat cgcctcaatt tctaaattag gaggcatact ttttattagt acacctttgg
     2641 gaatatataa atctgaagac aatgcagaca gttgggtgct tagctcaagc ggaataccca
     2701 tggataaaag atattcttca gccattttca gcaagaataa ttacattctt gcaggatcta
     2761 ttgccggttt gtacaggtca acagataatg gggaaacctg gactatcaca ggagctggtg
     2821 taattgtcaa ttctgttgag ggaattagtg agcataatgg agtactctac gtgtgtgcta
     2881 atggaaaagt ggccaagtct cagaagatga cggaattaca tggactgaca tgagtaatgg
     2941 tttagcacaa tttggaatag tgcacagtat actagcttgt gatgaaggat tgttttgtga
     3001 tttcaactgg cttggagtct ttaaatttga cacatcaaat aacatatgga atgagtttaa
     3061 cagcggcatt actaacctta gggtgaggag cttttgcagg actggcaatc gtttgtttgc
     3121 tgttactgaa gacgcagact ttggtcttat ctcttattcc gatgacaatg gtgaaacttg
     3181 gataaaatca attaatggtt catcacaaat tgggtattta tcaattttca gtgctaatgg
     3241 aatgctgctt gcaggatcgt ttggtgatta tctttatact tcaaataata atggagcatc
     3301 atggtctcat gtcagccatc ctgaatttcc cgcaagttac actagtagct ttgctgaaaa
     3361 taatggcgtt ttttttgctg cttcgctttt ttctggcagc gatatttaca gaagttttga
     3421 caatgcatct acatgggaag ctactaatac acttgggcag ggtgatattc aaagtgtcca
     3481 taattcaaat ggaattttgt atgcaggaag aacagatggt gtttttagaa ccagtgacaa
     3541 tgggaactca tggacgaaag cttctggtgg actaagtgaa ataccattca taaaagccat
     3601 tggtagtgat gatgaatata tttatacttc taccactagt gagggtcttt ggcgaagcaa
     3661 taatcagggt gatgactggg aattagtgat gaatccggga ttacaaaatt atgtaaatgc
     3721 aattgcaaat cgtaatgggt atatgtttgt tggcacaaaa acctctggta tcctttactc
     3781 agaagatcat ggcgacacat ggagtgatta tagtgaagga ttactcagcg aacttgaaaa
     3841 tggaaatatc cctctggtct atactttaca gataaaagga gattctattt actgtggatt
     3901 aaattcttat ggcacatggg ttgctccaat gccttacgtt accagtgttg gtaattatga
     3961 tgaggataat gtctcatact tttatgttta tcccaatcct gctcattcac aagttaatat
     4021 taaacttgaa agttctactt ctatcttctg ctctatttct atttttgatt tggccggacg
     4081 tcagcttcta aatatacaaa acaaactgct cacaataggg ttaaataata tcagtcttga
     4141 tgtaagccgc tttaataaag gtgtgtatat aattgaagtt tcaaagggca gttcagtagc
     4201 aatacaaaaa cttgttgtaa aatagcaata agatttcttt aggatcaacg atctctttct
     4261 tcagttaaag aggtaacatg attagcataa taatctatca gattaggatt caacacgtca
     4321 aaactcaatt tatcttcaga aaatttaatg atgtctcttt ttgccattaa ttctaatcgg
     4381 tcttcaacac taaatccatc agtttctatt actttgatat tatcttcata attactgatg
     4441 actttttgag ttactagtag taattgttga aaatcttcaa cttttatatg tttattatac
     4501 ttacttaaaa attgaattga actatacagc aggtgttctt taaagattgg catcatatta
     4561 accacccttg atctgacctg gttacaaatg ccaattgcat aactaccgtt ttcagcagga
     4621 ttatgacttg ctatgtattg attataactt acaggctctc caattcctat aaatactccc
     4681 ctgatatctc ttgatgaatg ggtctttttt aaatttataa atcttttgat taaatctgtg
     4741 tcttctgctt ttgtattagt atcaatagta atttttttct catcaggatt ttcagaccaa
     4801 ttaattgcaa taggcacaaa aataatatcc tctatttcga gttcaggatt gtcttttata
     4861 ttgttgaata atttttcaat agttccgata attccttttc gaaataaacc aatctttcca
     4921 tctctaggtc ttgtaccttc ctgaaaagac ataatctgtt ctccagccaa tacacttgcg
     4981 ctaagatagg aagatagtag tctgctataa tgttcatcct cagagtattt atctctcctg
     5041 attttgaatg ccccataact tttcatgata aaattcgaag ttctattctt gaaaagattc
     5101 tcaccggcag cagtgattgg aatagacagt ttattttcta aaaatgtgaa cccaagcata
     5161 aactcatcca gatgagattt atggtttggc atatacataa caatgttttt cttttgatgt
     5221 aactgagaaa aatctagatg cgattccagt gttattcttt tatccgtagg aagaataagt
     5281 ggtttcagaa atttagtgag tttaattagc gggtttttct tattagccgc aatatctttt
     5341 aattctttct ttatcgtttt taattgactt ctagagagat tctgtgatgt ctttgaaaat
     5401 tggtcaagat cgtaaagttc tgctgccttg ttcaatatat cccttaaacg gtattttttc
     5461 ctagacatta aatattattt taaaaacaaa tttagggaat taatcttagg tttcatttta
     5521 tttagaattt aataacgcgt ctagctcaat tagtgaattc aggcttgtgc tagtttgaat
     5581 tactattgac taaatattac tatattgcaa cgggcgtata tgaaaattcc gtttaaatat
     5641 agaatttaat tgaagtgttt aaatgtattt tcaatgacct atttatcgat gcataatgaa
     5701 ccattaatat tacaaaaaca tctgtttaaa atatttaaac tgtttttgct tatcccgatt
     5761 atttacagtt gttctggccc agaatcaatg aataattatg tttatcaacc tgtttatctg
     5821 aatcataatg atactgtaaa atatactgga atagaatcct gcaaagaatg ccactaccat
     5881 aattacattt catacttgcg aacaggtatg ggtttgtcat tcgactcagc tacaaaacta
     5941 aaaagtgcct ctgttattgg tcctgattcg atactatacg atagtgataa tgatctttat
     6001 tttcatcctt actgggatgg gaaaatcatg aaggttaagg agtttcgctt ggaaggagct
     6061 gacactttgc atagtaggat tcaaactgta gattatattg ttggttctgg gcaacatact
     6121 aattcacata tttatatcat aaataattat gcctaccaga taccttttac ctattatacg
     6181 caggatcaaa aatttgattt cccgccgggt tttgaaggaa ggtataattc acgttttagc
     6241 cggaaaatcg gacttgaatg cctgtcatgt cataacagct tccctgagat ggtaatgggt
     6301 tcagaaaata agtacaccta catacctgac ggaataaatt gcgagcaatg ccacggtccc
     6361 ggggaaatac atgtaaaact aaaaaaggaa ggtgtaattg ttgacacatc tcagtttatc
     6421 gattacagca ttgtaaaccc tgt
//
LOCUS       DASCQP010000557         1812 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002020797, whole genome shotgun sequence.
ACCESSION   DASCQP010000557 DASCQP010000000
VERSION     DASCQP010000557.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1812)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1812)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1812
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002020797"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1606)
                     /locus_tag="QF480_09520"
     CDS             complement(<1..1606)
                     /locus_tag="QF480_09520"
                     /inference="COORDINATES: protein motif:HMM:NF014805.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin carboxylase N-terminal domain-containing
                     protein"
                     /protein_id="HJN06842.1"
                     /translation="MEIKKVLVANRGEIAIRVFRACTEINLTTIAIYTYEDRYSRHRF
                     KADEAYQIGADTDPLKPYLNIEEIINLATKLNVDAIHPGYGFLSENTEFARRCEENGI
                     IFIGPRPEVMDLLGNKINAKEIAEKCGVPIIASSKLPLSDSKIALEEAKRIGFPVMIK
                     AAAGGGGRGMRLVSEAGQLENNYVSAQNEARNTFGDGTLFIEKYIGNPKHIEVQIMAD
                     NHGNIVHLFERDCSVQRRYQKVVEVAPSLNLDKEVKEKLYDYAIKICKEVKYNNIGTV
                     EFLVEDKEIYFIEVNPRIQVEHTVTEVVTNRDLVKAQIFIAGGYKLGDVQIKIHSQED
                     LTTNGFAIQCRITTENPRDDFKPDYGTISTYRIASGFGIRLDAGSIYQGVKISPFFDS
                     MLVKITSHSHTLEGAVRKMARALIEFRIRGVKTNIPFLENIILHKSFVEGNATVNLIK
                     DNPELFVLKPRRDRATKIIKYLGEVIVNGNPDVKFVDKNRKFTTPKVPDFDASKNFSK
                     GTKNLLTDLGPEGFTQWLRSEKKIHYT"
BASE COUNT          508 a          373 c          295 g          636 t
ORIGIN      
        1 ctgtataatg tatctttttt tcacttctta accactgagt gaacccttct gggccaaggt
       61 cagttagtaa attctttgtt ccttttgaga aatttttact tgcatcgaaa tcaggaactt
      121 ttggagttgt aaacttgcga ttcttatcaa caaacttcac atcgggatta ccatttacga
      181 taacttctcc aaggtattta atgatcttcg ttgcacgatc acgtcgtggt tttaagacaa
      241 ataattctgg attatcctta atcagattaa ctgttgcatt tccctctaca aaactcttgt
      301 gaagaataat attttccagg aaaggaatat tcgtttttac acctctgatt ctaaattcaa
      361 taagtgctct tgccatttta cgaactgctc cctcaagagt atgtgaatgg gaagtgatct
      421 tcacgagcat ggaatcaaaa aacgggctta ttttaacccc ctggtaaata cttcctgcat
      481 ccaaccttat tccaaatcca ctggctatac gataggtcga tattgtgcca taatcgggtt
      541 taaaatcatc ccgcggattt tcagtagtga tgcggcattg tattgcaaaa ccgttagttg
      601 taagatcttc ctgtgagtgt attttaattt gaacatcacc cagtttataa ccgccggcaa
      661 taaaaatttg tgctttaact aagtctctat tggtaaccac ttctgttact gtgtgttcca
      721 cttgtatgcg tggatttact tcaatgaaat atatttcctt gtcttcaacc aaaaattcta
      781 cggttccaat gttgttgtac ttaacttctt tacatatttt tatagcgtag tcgtacagct
      841 tttccttaac ctccttatcc aggtttaaag atggagctac ctccacgact ttctgatatc
      901 ttctctgaac agaacagtct ctttcgaaaa gatggacaat attaccatgg ttatcagcca
      961 ttatttgtac ttcaatatgt ttgggatttc caatatattt ttcaataaat aaagtaccat
     1021 caccgaaggt atttcgtgcc tcattttgcg ctgacacata attattctcc aattgcccag
     1081 cctcgctaac taagcgcata ccacgtcctc cacctccggc tgcagctttt atcatcacag
     1141 gaaaaccaat tcgctttgcc tcctcaagtg cgattttcga atcgctgagt ggcaatttgc
     1201 tactagcaat tattggaaca ccgcattttt cagctatttc tttagcatta atcttgtttc
     1261 caagtagatc cattacttca ggtcgcggac caataaatat gatcccattt tcttcgcatc
     1321 ttctggcaaa ttcggtattc tcagaaagga atccataacc gggatgaatg gcatcaacat
     1381 tcaatttagt tgcaaggtta ataatctctt caatatttaa ataaggttta agaggatctg
     1441 tgtcggcacc tatctgataa gcttcgtctg ctttgaaacg gtgtcgtgaa tagcgatctt
     1501 cataggtgta aatagcaata gttgttaaat ttatctcagt gcatgccctg aagaccctga
     1561 tggctatttc gcctcggttg gcgaccagta cttttttaat ttccatgatt gtttgcctaa
     1621 aatatctaca gatttcctca aatttacgaa gtatttttgt tttttcaacg aatagatttg
     1681 tatgtttatt aacactagct attctatttg gattccattt aaataatgcc cctgagaaca
     1741 gtacttttac tttttgaaaa ctatttctaa aaatagattt aaccgcaaaa aacttaatga
     1801 aatgggattc ac
//
LOCUS       DASCQP010000558         2758 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002022291, whole genome shotgun sequence.
ACCESSION   DASCQP010000558 DASCQP010000000
VERSION     DASCQP010000558.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2758)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2758)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2758
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002022291"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1964
                     /locus_tag="QF480_09525"
     CDS             <1..1964
                     /locus_tag="QF480_09525"
                     /inference="COORDINATES: protein motif:HMM:NF013491.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="PEP/pyruvate-binding domain-containing protein"
                     /protein_id="HJN06843.1"
                     /translation="KEFESFLKKIPSESLLYHGSRDNFSMWLMARGEIIAASIINLKK
                     VDDFENANELRKDLLNMLKEYRNERDSGNIIPYKSKKEITEENVYTLAGGSLGGKGRG
                     LAFIDALINNFDFSKFIPDVKVRTPKTFVIGTLEFESFLKNNNLTQGLLDNNDYAEIK
                     KRFIAGQLSDELLKNLSELLDDIKKPIAVRSSGMFEDSLTQPFAGIFETYLLPNSNPD
                     INVRLSQVADAIKLVMASVYSDTAKGYVKTIDFKIEEEKMAVIIQEVVGNKFGNLYYP
                     HLSGVAQSYNFYPFAHMKPEEGFAIAAVGLGKYIAEGNKAYRFSPKYPTIEINTTKNQ
                     LRNSQVKFYAVDLKKGNLNLLEGELAGLSENDVSVSENQGTLKHLASVYNPDNNTVYP
                     GITKPGPRIINFANILKYNYISLAKTIELVLRLGRDAMGTVIEIEYAVDLTKDDDGKA
                     SFYILQIKPLIQYGVDCNIELEKINKKSIVLYSEKGMGNGIIDDITDVIYADVDRFDK
                     SFTEDMAREIAEMNASMIKQDRKYVLIGPGRWGTRDRWIGIPVKWHMISNAKVIVESS
                     LDKFPLDASSGSHFFYNVTSMNVGYFTVQPELHKSYVKYDKLNDQQIIRKGKYFNHVR
                     FKQPLSIKMDGKKRIYMINENENNKKEEE"
     gene            complement(2035..>2758)
                     /locus_tag="QF480_09530"
     CDS             complement(2035..>2758)
                     /locus_tag="QF480_09530"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HJN06844.1"
                     /translation="IKLNKNFGQHNATMCGFTFTKGDKIITIDDDLQNPPEEIKKLFE
                     NYQNNRSDVTYGIYTKKQHIFARNVMSKSAKKSSKFFMKGTGKGSSFRIINHKIVKRL
                     LEHNISFIFIDEVLQWYTGNISFADVEHKKRKHNKSGYSTRKLFNLASDLTYYYTNIP
                     LKLMVYGGMIISVLSFILALKFIIQKFFYDVPTGYTSIIVAILFSTGIIVFSLGIIGG
                     YLSRIQTVQNKKPPFHIEELLD"
BASE COUNT          968 a          432 c          488 g          870 t
ORIGIN      
        1 tgaaagaatt tgagagtttc ctaaagaaaa ttcctagcga atcattattg tatcatggta
       61 gtagggataa tttctcaatg tggctaatgg ctcgaggtga aataattgca gcaagtataa
      121 taaatttaaa aaaagttgat gattttgaaa atgctaatga actgcgtaaa gacttgctta
      181 acatgcttaa ggaatatagg aacgagcgtg actcaggcaa tattatacct tataagagca
      241 aaaaggaaat tactgaagag aatgtttata cgcttgccgg cggttcactt ggaggcaaag
      301 gtagaggttt agcatttatt gacgcattaa ttaacaattt tgatttttca aaatttattc
      361 cagatgttaa ggtacgcaca ccgaagactt ttgtaatagg aacactagaa tttgaatctt
      421 ttcttaaaaa caataacctt acacagggac tgctagacaa taatgactat gctgaaataa
      481 aaaaacgttt catcgccgga caactatctg atgaactttt aaaaaacctg tccgaattac
      541 ttgatgatat taaaaagcct attgccgtta gatcatcagg catgttcgaa gattcattaa
      601 ctcaaccttt tgcaggaata ttcgaaacct atctattgcc taacagtaac ccggatatta
      661 atgtgcgcct tagtcaggtc gcagatgcta ttaagcttgt tatggcctct gtttattcag
      721 ataccgctaa aggttatgta aaaactatcg actttaaaat tgaagaggaa aagatggcag
      781 taataataca ggaagtagta ggaaataaat ttggcaacct atattaccct catctaagtg
      841 gtgttgctca atcctataac ttttacccat ttgcacatat gaaacctgaa gaaggatttg
      901 ctattgcagc tgttggactt ggtaaatata ttgctgaagg gaataaagcc tataggttct
      961 ctccgaaata tcctaccatc gaaattaata ctacaaaaaa tcaattgagg aattcacaag
     1021 ttaaattcta tgcagttgac ctgaaaaaag gaaaccttaa tcttcttgaa ggagaattgg
     1081 caggattatc tgaaaatgac gttagtgtgt cggaaaatca aggtactctt aaacatctgg
     1141 catctgttta taatccagac aataatacgg tatatcctgg gattactaaa ccgggtcctc
     1201 gtattattaa ttttgccaat attctcaaat acaactatat ttctcttgct aaaacaattg
     1261 aactcgtgct taggcttggc agagatgcaa tgggaacagt tattgaaatt gaatatgctg
     1321 ttgaccttac aaaagacgat gacggaaaag cttcatttta tattttacag ataaaacctt
     1381 tgatacaata tggcgtcgat tgcaatatcg aattagaaaa aataaataag aaatccatag
     1441 tgctgtactc cgagaaagga atgggaaatg gtataatcga tgatattaca gatgtaattt
     1501 atgctgatgt tgacaggttt gataaatcgt ttactgaaga catggccaga gaaattgcag
     1561 agatgaatgc atctatgatc aagcaagaca gaaaatatgt gttaataggt cctggaagat
     1621 ggggtactcg cgataggtgg attggtattc ctgtcaagtg gcatatgata tcgaatgcaa
     1681 aagttattgt ggaatccagt ctcgacaagt ttccgttaga tgcctcatct ggttctcatt
     1741 ttttctataa tgtaacaagt atgaatgttg gttattttac tgttcaaccc gagctccata
     1801 aaagctatgt taaatacgat aaattaaacg atcaacagat tataaggaaa gggaaatact
     1861 ttaaccatgt taggtttaaa caacctttaa gcattaaaat ggatggcaag aagaggattt
     1921 atatgataaa tgagaatgag aataataaaa aagaagaaga gtaataatac tcaacaaaca
     1981 atttccaagc ctaatgcaaa tatacttctg agtcaactac aaataacttt cctgtcaatc
     2041 aagtaattct tcaatatgaa atggaggttt tttattttgc actgtctgaa tccgacttaa
     2101 gtatccgcca attattccca gactaaaaac tataatacca gtagaaaaca atatggcaac
     2161 aataattgaa gtataccctg taggtacatc ataaaaaaac ttttgaataa taaacttcaa
     2221 agccagaata aaactcagta cagaaattat catacctcca taaaccatta attttagtgg
     2281 aatatttgta taataatatg tgagatcgga agcaaggtta aaaagctttc tggtactata
     2341 cccagattta ttatgctttc tttttttatg ttcaacatct gcaaatgaga tgtttcctgt
     2401 ataccattgt aatacctcat ctataaaaat aaagctgata ttatgctcga ggagtctttt
     2461 aacaatttta tggttaatga ttctaaatga tgaaccttta cccgtaccct tcataaaaaa
     2521 ttttgatgac tttttcgcac ttttgctcat cacgtttcgg gcaaaaatat gctgcttttt
     2581 tgtgtaaata ccatatgtga catcactacg attattttga tagttttcga ataatttttt
     2641 tatttcttcg ggaggatttt gtagatcatc atcaattgta ataatcttat cacctttggt
     2701 aaacgtaaat ccgcacatag tggcattatg ttgtccgaaa ttcttattaa gctttatt
//
LOCUS       DASCQP010000559         5441 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002022402, whole genome shotgun sequence.
ACCESSION   DASCQP010000559 DASCQP010000000
VERSION     DASCQP010000559.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 5441)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5441)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5441
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002022402"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            252..2075
                     /gene="mrdA"
                     /locus_tag="QF480_09535"
     CDS             252..2075
                     /gene="mrdA"
                     /locus_tag="QF480_09535"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009136113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HJN06845.1"
                     /translation="MYSKDYSSRKDIIIGIFIVVALLFIIRFFYLQVIDNSYKLSADN
                     IVLRNVREYPPRGLVYDRNGKLLVFNEAAYDLMIIPNQMKNIDTSLFCELVDIDKITF
                     EKKIKNAKQYSFYKPSTFLKQISKKDIGKIQEKLYAFKGFYIQTRTLRQYPLPIAGHM
                     LGSIGEVNKNEISKDNFYRPGDYIGKSGIERYYEKHLRGKSGMSIVEVDVHNRIKGKY
                     SNGNFDTLAVAGKDIYLGIDAQLQQFGEQLMQNKKGSIVAIDPHTGEILSLISSPGYN
                     PNLLVGRERSPNYAKLLSDTLVPLMNRATMGTYPPGSTFKMVNALIGLQEKTAYSESK
                     YSCQGLLSTPIKCTHDHKSPLNLMEAIEQSCNPYFWNTFKSILENPKYTNSQEGYEQW
                     YNNVVSFGFGRKFNTDIPFEVSGNIPDNEYFDRLYRGHWNALTVRSLSIGQGEILVTP
                     IQLANMAVIIANKGYYYPPHLLIDMEDEKHSIQEFKVKQTSTIDPDNFNLVRDAMLNV
                     FEAEHGTARWYVLDSIKQCGKTGTVQNPHGDDHSIFIAFAPMENPKIAISVIVENSGF
                     GSTWAAPIASLMIEKYLLGEVGRTILEKRIKEGDLIHKIEN"
     gene            2084..3343
                     /gene="rodA"
                     /locus_tag="QF480_09540"
     CDS             2084..3343
                     /gene="rodA"
                     /locus_tag="QF480_09540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005828538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein RodA"
                     /protein_id="HJN06846.1"
                     /translation="MSKREKISGSIDWVTVTIYIILVTLGWFSVFTASAGEDVTNLFD
                     LSTRYGKQILWIGLAVVLALIILVIDAKFFSTFSFVFYFGMLILLIAVLLFGSVVAGS
                     KSWFKIGGFAIQPAEFAKFATALAMAKYLSILNIDMRRLKTKLISLTILAVPALLILL
                     QNDTGSALVYFSFVIVLFREGFSGLLLIVGIIMTLLFLVTLLISELYVIAALVVLAFL
                     ILIFIRSVRRHWKAVMGILVLSTAFVYSVNYSFENVLEPHQKKRINVLLGLEEDLRGA
                     GYNVNQSKIAIGSGGLAGKGFRQGVLTRYNFVPEQSTDFIFCTVGEEWGFIGVTTVIL
                     LFLALLIRIVLLAERQRSKFSRIYGYGVASILFFHFAINIGMTVGLAPVVGIPLPFFS
                     YGGSSLWAFTILLFIFIKQDAKRLNVL"
     gene            3445..4287
                     /locus_tag="QF480_09545"
     CDS             3445..4287
                     /locus_tag="QF480_09545"
                     /inference="COORDINATES: protein motif:HMM:NF012955.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HJN06847.1"
                     /translation="MKLYPIETGNLKLDGGAMFGVVPKVLWQKAYPADENNLCNWSMR
                     CLLIVDGNRRILIDNGIGNKQDEKWLAHYYLNGNDTLENSLAKIGESPENITDVILTH
                     MHFDHCGGSVKWNDDKTGYELTFPNATYWISRKQYEWATHPNRREKASFLKENILPIE
                     ESGQLNLIVDEGEHIPNITFKMFNGHTEGQIIPHIKTGDTTVVFMADLLPATAHIPMP
                     WIMAYDIRPLLTLKDKERFFKDALNDNFVLFFEHDLYNEACTLQDTPKGVRVKDTGKL
                     IDFI"
     gene            4287..4646
                     /locus_tag="QF480_09550"
     CDS             4287..4646
                     /locus_tag="QF480_09550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009124673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HJN06848.1"
                     /translation="MARHNVLGKQGEEIAKKFLLEKNYAIIDTNWRFDKDEIDIIAKD
                     CEELVIVEVKTRSTDFYGFPEDAVDSQKEGFLIRATEAYLMENELDLDTRFDIISIIL
                     NKKETKIYHIVDAFYPD"
     gene            complement(4689..5051)
                     /locus_tag="QF480_09555"
     CDS             complement(4689..5051)
                     /locus_tag="QF480_09555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06849.1"
                     /translation="MKKILIILLFSAFIFSEYSCKKTIEDAIDCVFESAFVVVHADLD
                     SINPKLMHFEFVYTPSEGYSLEQSIHWDFGDGESIIGDTIIDHLYEAGTYEAVAGYTL
                     RKGSATCSSTSTKHIVIH"
     gene            complement(5226..>5441)
                     /locus_tag="QF480_09560"
     CDS             complement(5226..>5441)
                     /locus_tag="QF480_09560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06850.1"
                     /translation="DSLPKMLLIRDSFGATLIPFLSEHFSKSVFIFDGWHHWFNEDIV
                     LNEKPDIYIQLVLESFMSNVSIEKKRD"
BASE COUNT         1834 a          855 c          986 g         1766 t
ORIGIN      
        1 tacgacataa ttctgcaata gagctctctc cacgcatacc atcaatgata attctgattt
       61 tctcctcgga attgtaactc tttcttgttt tcctttttaa atcactaatt agtgaagttg
      121 cacttttctt cctagccaat ttctttactt tttaagatta ataaaattat aaaatatata
      181 tcttaaattt gactcgtgaa aagttcactt tttgctgaaa ctatacagat aaaggactat
      241 aagacggttg tatgtattca aaagactatt cttcccgtaa agatataata attgggattt
      301 tcattgtggt tgctttgttg tttatcatcc gcttttttta tctacaagta attgataaca
      361 gttacaaact cagcgctgat aatattgtgc tacgcaatgt acgcgaatat ccaccaaggg
      421 gactcgttta tgacagaaat ggcaaacttc ttgtttttaa tgaagcggct tacgatttga
      481 tgattattcc aaatcagatg aagaatattg acacctcatt attttgtgag ctcgtggata
      541 ttgataaaat aacttttgag aaaaagatta aaaacgctaa gcaatattca ttttacaagc
      601 cttcaacatt tctgaaacag atctcaaaaa aagacattgg taagattcaa gaaaaattat
      661 acgcatttaa aggtttttac attcaaacac gtacgctaag acaatatcct cttcccattg
      721 ccggacatat gttaggaagt attggtgaag ttaacaaaaa tgaaatcagc aaagataatt
      781 tttatcgacc tggtgattac ataggcaagt caggtataga aagatattat gaaaaacatt
      841 tacgtggaaa aagtggaatg agtattgttg aagttgatgt tcataacagg ataaaaggga
      901 aatatagcaa tgggaatttt gacactcttg cggttgcagg taaagatatt tatcttggta
      961 ttgatgcaca acttcagcag tttggagaac agctcatgca aaacaaaaag ggcagtattg
     1021 ttgctattga tcctcataca ggtgaaatat tatcattaat cagtagccca ggatataacc
     1081 ctaatctact agtaggtaga gaaagatcac ctaattatgc caaactgctt agtgatactt
     1141 tagtgccatt aatgaacagg gctacaatgg gaacttatcc accaggatca actttcaaaa
     1201 tggttaatgc acttattgga ttacaagaga aaactgccta cagtgaatct aaatacagct
     1261 gtcagggttt gttatcaaca ccaataaaat gcactcacga tcataaatca cccttaaatt
     1321 taatggaggc tattgaacaa tcttgtaatc cgtatttttg gaatactttt aagagcatct
     1381 tagaaaatcc aaaatacact aactcacaag aaggttatga acaatggtat aataacgttg
     1441 taagctttgg gtttggaaga aaattcaata ccgatattcc tttcgaggta agtggcaaca
     1501 ttcctgacaa tgaatatttt gatcgtttat atagaggaca ttggaatgcc cttacagtaa
     1561 gatctcttag tattggacaa ggcgaaatac tagtaacacc tattcaatta gccaatatgg
     1621 ctgtaattat tgcaaataag ggctactatt atccaccaca tttattgata gatatggagg
     1681 atgaaaaaca ttcaatacaa gaatttaaag taaagcaaac atcaacgatt gatcctgaca
     1741 attttaatct tgttcgtgat gcaatgctta atgtgtttga agccgaacac gggacagcta
     1801 ggtggtatgt tctggacagc attaaacagt gcggtaaaac aggaacagtt caaaatccac
     1861 acggtgatga tcattctatt tttattgctt ttgcacctat ggagaatccc aaaatagcta
     1921 tatcggtaat agttgaaaat tcaggttttg gttcaacatg ggcagcacca attgcaagtc
     1981 ttatgattga gaaatattta ttaggagaag ttggcagaac gatattagaa aaaagaatta
     2041 aggaaggtga tttgattcac aaaattgaga attaagattg agtgtgagta agagggaaaa
     2101 aatatcaggt agtattgact gggtcacagt aacaatatac attattttag ttacactggg
     2161 atggtttagt gttttcacag cttctgcagg tgaagatgtt acaaatctat tcgacttgag
     2221 cacacgatat ggaaaacaaa ttttgtggat tggccttgca gtggttttag cattaattat
     2281 attggttatt gatgctaaat ttttcagcac tttttccttt gttttttatt ttggaatgtt
     2341 gattttgctt attgcagtgc ttctatttgg gagtgtggtt gcagggtcta agtcatggtt
     2401 taaaattggt gggtttgcaa tccaacctgc cgaatttgca aaatttgcaa cagcactagc
     2461 tatggcaaaa tacctgagca ttcttaatat tgatatgaga aggttaaaaa caaagcttat
     2521 atctctcact attttggcag tacctgcatt acttattcta ctacaaaacg acacaggatc
     2581 agcgctagtt tatttttctt ttgtgattgt actatttcga gaaggttttt caggattatt
     2641 actaattgtc ggaataataa tgacactcct ttttcttgtt accctgctaa tcagcgaatt
     2701 atatgttatt gccgccttag ttgttcttgc ttttttgatt ttaatattta ttcgttccgt
     2761 tcgaaggcac tggaaagcag taatggggat attagtcctg tcaacagcat ttgtatatag
     2821 tgtcaattac tctttcgaga acgtactaga acctcatcaa aaaaaacgta tcaacgtact
     2881 tcttggactt gaagaagacc ttcgaggagc aggttataac gttaatcagt caaaaattgc
     2941 cattggatca ggtgggctgg ctggcaaagg ttttcgccaa ggtgtattaa cccgatacaa
     3001 ttttgttcct gaacaaagta ctgactttat tttttgtact gttggagaag aatggggttt
     3061 cataggggta acaactgtta tattattgtt tcttgcttta ttaatacgca ttgtacttct
     3121 tgccgaaaga caacgatcga aatttagtag aatttatgga tacggggtag cctcaatctt
     3181 attttttcat tttgctatta atataggtat gactgtgggt cttgccccag ttgtcggaat
     3241 tcctttacct ttttttagct atgggggatc atcattatgg gcgtttacta tattactttt
     3301 tatttttata aaacaagacg cgaaaagatt gaacgtgctg taacaggttt aaacagaacg
     3361 ttacaaacta ttccattcct tttatctcct aattatcata actttgcttc ctaataataa
     3421 attaatttat ataacgattt aaacatgaaa ctttacccca tagaaacagg aaatttaaag
     3481 ctagacggag gtgcaatgtt tggagttgtt ccaaaagtac tatggcaaaa agcatacccc
     3541 gcggatgaaa acaatttgtg taattggtca atgagatgtt tactaattgt tgatggtaac
     3601 agaaggattt taattgataa cggtatagga aataagcagg acgaaaaatg gttagcccat
     3661 tattacttga atggtaatga tactcttgaa aattctcttg ccaaaatagg cgaatcccct
     3721 gaaaatataa ctgatgtaat attaactcat atgcatttcg accattgcgg tggcagtgta
     3781 aaatggaatg atgacaaaac cggctatgag cttactttcc caaatgcaac atattggatc
     3841 agccgaaaac aatatgaatg ggcaacacat ccaaatcgtc gcgaaaaagc ctctttcctt
     3901 aaagaaaaca tactgcctat tgaagaaagt ggacaactca atttaattgt tgatgagggt
     3961 gaacatattc caaatattac attcaaaatg tttaacggac atactgaagg acaaattatt
     4021 cctcatataa aaactggtga tactacggtc gtttttatgg ctgacctact tccggctacg
     4081 gcacatatcc cgatgccatg gatcatggct tatgacataa ggccattatt aacccttaaa
     4141 gacaaagaac ggttttttaa agatgcccta aatgacaact ttgttttatt ttttgaacac
     4201 gatttatata atgaagcgtg tactttacag gatactccta agggagtaag ggttaaagac
     4261 actggcaaat taattgactt tatttaatgg ctcggcataa tgtacttggc aaacaaggag
     4321 aagagattgc aaaaaaattt ctgctggaaa agaattatgc tataattgat actaattgga
     4381 gatttgataa agatgaaata gatataattg ctaaagattg tgaagagcta gtaattgttg
     4441 aagtaaaaac cagaagtaca gatttttacg gctttccgga agatgcagta gattcacaaa
     4501 aagaaggatt tctgataagg gctactgaag cttatcttat ggaaaatgaa cttgatttag
     4561 atacacgttt cgatattatt tcaataattc tgaataaaaa agaaacgaaa atataccaca
     4621 tagtggatgc attttatcct gattgatgat tattctaaaa gctatgtgtg gaaattactt
     4681 agtgtacatt aatggataac aatgtgtttc gttgacgtac ttgaacaagt tgcgcttcct
     4741 tttcttagtg tataacctgc aacagcctcg tatgttccgg cttcatataa atgatcaatt
     4801 attgtatcgc caataatcga ctccccatcg ccgaaatccc aatgaattga ctgctcaagt
     4861 gaatatcctt cacttggagt atacacaaat tcaaagtgca taagttttgg attaattgag
     4921 tcaagatctg catgaacaac aacaaatgct gattcaaaaa cgcaatcaat agcatcttca
     4981 attgtttttt tacatgaata ttccgagaaa ataaatgctg agaagagtaa tattattaaa
     5041 atctttttca taacagttta ataagttaaa aatttgggtt ttctattgtg tataactaaa
     5101 taattgaaat tcaactatta caaatatact gcattttcaa ggtgaagtca aaaaataatt
     5161 attactattt tatcaaagtt aagttaatca atagtgtaag gatagaataa ttgaatctga
     5221 gtacatcaat cacgtttttt ttctatactg acattggaca taaaggattc aagcaccaat
     5281 tgaatgtata tatctggttt ttcatttaaa acaatatctt cattaaacca gtgatgccat
     5341 ccatcgaaaa taaaaacact tttgctaaaa tgctcactta gaaacggaat tagtgttgca
     5401 ccaaatgagt cgcgaatcag taacattttc ggcaagctat c
//
LOCUS       DASCQP010000560         2196 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002023130, whole genome shotgun sequence.
ACCESSION   DASCQP010000560 DASCQP010000000
VERSION     DASCQP010000560.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2196)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2196)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2196
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002023130"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(94..>2196)
                     /locus_tag="QF480_09565"
     CDS             complement(94..>2196)
                     /locus_tag="QF480_09565"
                     /inference="COORDINATES: protein motif:HMM:NF015726.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C25 family peptidase C-terminal
                     domain-containing protein"
                     /protein_id="HJN06851.1"
                     /translation="ENNGEPAGAIATLMSTINQSWNPPMRGQDEMNDILSEAYSDNIK
                     RTFGGISMNGCMNMNDVYGTAGEEMTDTWTIFGDPSLEIRTAVPQDLTVTHPASVILG
                     STTMSITCDAEGAFATFSMNGEIIGSAIVEGGSATLTYEGLTNLGTADFVVTSFNYRP
                     YISTIEIIPAEGPYIVYATNIINDIAGNNDGLMDYSENILLTVGLTNVGLEEAVGVTA
                     TLTTTSEYIELVSTEADYGNIAANDTVIVVDGFEFNVTDDIPDLIIANFQISAQDENG
                     NEIWESSFMLTGHAPSLVFSGFAIDDSDGNSNGRIDPGETVEIAVDISNDGTSEAYNV
                     MSELQSSSEYIEINGDPQSLGNIPGNEIEQVIFSVSAASDTPEGTSVTFEINMIADHG
                     ISGTDDFIAVIGLKSILIIDLANSNSTSSIESCLDMLQVERDVVIDWSADINNYQSVF
                     VLLGIYPDNYVLENAEGDLLATYLENGGRIYMEGGDTWAYDNQTSVHELFNIEGIADG
                     AGDLGTIVGESGSIMHSFEFEYNGINSYIDQIAPKSNSLLIFKNTEPEYGTGVSFENE
                     VYKTIGTSFEFAGLVDQEGSTKDEVMAEILFFFGINYMWTDIDDNPITDLNVIAYPNP
                     TNENVTIQLSLDKSYEVSLSIFDLTGRKITDLSNEEKIIGGSHNYYWNTTGVDSGIYF
                     YKLNIGSTSVVRKIIVTK"
BASE COUNT          684 a          454 c          323 g          735 t
ORIGIN      
        1 acaaaaactg gcttatcata ttgcagttat gcgtggctgt aacgtagata tgccacgtaa
       61 tcttgcaaaa tctgttactg tcgaataatt gagctatttg gttacgataa tttttcttac
      121 aacagaagta cttccaatat ttaatttgta gaaatatatt cctgaatcca cacctgtagt
      181 gttccaataa taattgtgtg aaccaccaat aattttttcc tcattagaaa gatctgttat
      241 ttttcttcca gtcaaatcaa agattgaaag gctgacttca taacttttat ccagagaaag
      301 ttgaatagtg acattttcat tagtcggatt agggtatgct ataacgttta aatcagtaat
      361 cggattatca tcaatatcag tccacatgta atttatccca aaaaagaata atatttcagc
      421 catcacttca tctttggttg atccttcttg atcaacaaga cctgcaaact caaatgaagt
      481 accaatagtt ttatatactt cattttcaaa agaaacccct gtgccatatt caggttctgt
      541 atttttgaaa atgagcaaac tgtttgactt tggtgcaatt tggtctatat aactgtttat
      601 accattatat tcaaattcga aactatgcat gatactcccg ctttcaccaa caatagttcc
      661 taagtctcca gctccatcag ctataccctc tatattaaaa agttcatgaa cacttgtttg
      721 gttatcatat gcccaggtat cacctccttc catgtatata cgtccgccat tttcaaggta
      781 tgtggcaagt aaatcaccct cggcattttc taacacataa ttatccggat atatccctaa
      841 caatacaaat actgattgat aattattaat atctgcagac caatcaatta caacatctct
      901 ttctacttgt aacatatcca aacatgattc aattgaactt gtagaattgc tatttgccaa
      961 atcgataatt aaaatagact taagtccaat tactgcaata aagtcatcgg ttccactaat
     1021 cccatgatca gctatcatat ttatttcgaa agttacagaa gtaccctcag gcgtatcaga
     1081 tgcagcagat acgctaaata ttacttgttc tatttcatta ccgggaatat tgcctaatga
     1141 ttgaggatcg ccgtttatct caatgtattc acttgaagat tgcagctcac tcataacatt
     1201 ataagcttct gatgttccat cgtttgatat atcaacagca atttcaacag tttcacctgg
     1261 atcaattctt ccattgctat ttccatccga atcatcgatt gcaaatccac taaagactaa
     1321 acttggtgca tgacctgtta acatgaaaga agattcccaa atttcattac cattttcgtc
     1381 ttgagcagat atctggaaat ttgcaataat taggtcaggg atatcatcag tcacattaaa
     1441 ctcaaatcca tcaaccacta tcactgtatc atttgcagca atattaccat aatcggcttc
     1501 tgttgaaacg agttcaatat attcacttgt agttgtcaaa gttgcagtca cacctactgc
     1561 ttcttctagt ccaacattag ttaaaccaac tgttagcaat atgttctcgg agtaatccat
     1621 taatccatca ttattacctg ctatgtcatt gattatattt gttgcataga ctatataagg
     1681 cccttcagct ggtataattt caattgtgga aatatatggt cgataattga aagatgttac
     1741 cacaaaatca gctgtaccta agttggtaag tccttcgtaa gttaaggttg cagacccacc
     1801 ctcaacaatt gctgaaccaa taatctcacc attcatacta aatgttgcaa atgcaccttc
     1861 tgcatcacat gtgatactca ttgttgtaga acctaatata acagacgctg ggtgtgtaac
     1921 ggttaaatct tgtgggacag ctgttcttat ctcaagtgaa ggatcaccaa aaatagtcca
     1981 ggtatctgtc atttcttcac cagcagttcc ataaacatca ttcatgttca tacaaccatt
     2041 catggatatt cctccgaatg tacgtttaat attatcagaa tatgcttcac tcagtatatc
     2101 attcatttca tcctgaccgc gcattggagg attccagctt tggttgattg ttgacattaa
     2161 agtggcaatt gcccctgctg gttcaccgtt attttc
//
LOCUS       DASCQP010000561         2413 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002028370, whole genome shotgun sequence.
ACCESSION   DASCQP010000561 DASCQP010000000
VERSION     DASCQP010000561.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2413)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2413)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2413
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002028370"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            60..1112
                     /gene="purM"
                     /locus_tag="QF480_09570"
     CDS             60..1112
                     /gene="purM"
                     /locus_tag="QF480_09570"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004641 -
                     phosphoribosylformylglycinamidine cyclo-ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HJN06852.1"
                     /translation="MNNKHWTYADAGVDIKRIKSSQKDIGEILKETFTNRKGKIGTVL
                     EDIGHYAGLIDSGKNSAIALHTDGVGTKVLVAQMMNKFDTIGIDCVAMNVNDIICLAA
                     EPIAFLDYIALKKMDKDLIKEISKGLVLGAKEASVAIIGGETAIMPGVIDGEGDKAFD
                     LVGMVLGIVNKKQVITGNQIKKGDIIIGAESSGIHSNGYSLIRKVLLSKYRIEEHIGL
                     DESLGEELLKPTKIYVKPILNILRKIRPSGLAHITGGGFSKLTRLVKARNLGFKIDNM
                     PKPLPIFTLIQDEGKISDLEMYRTFNMGIGFCIIASSVESEKIQKILRQHRINSTEIG
                     EIVKDPGVFIGGLKVD"
     gene            complement(1115..>2413)
                     /locus_tag="QF480_09575"
     CDS             complement(1115..>2413)
                     /locus_tag="QF480_09575"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014425.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HJN06853.1"
                     /translation="FPLKGTVFDEAFYVPAARDILNGVSSNPEHPFLGKAWISIGIYI
                     FGDNWFGWRIIPTIFSVLSLSVFYLISKRFLGKNLAVYATAMLGFEVMFFVHGSLALL
                     EVPSIFFAFLSFWLYLERKGRKILKIPLYYWLSTLAMGLAFLSKETAAFYVIIIIFLY
                     ITSRIQFTNYKELLPKLYKAIILLLVLAGVYIIPVTIYDIVYQPSSSTEIVITHTVVQ
                     VPDEFGMMIDNSTVTNTATNKVTINNALEHLIYTVSYASGLTITNESEVNSGNYAWNW
                     ILPIPNYPPSPYYVESAEVRHTTKSNEEIIGITTETRHPISWYGIGTNIPIWWSIWLI
                     VPFTAFNILRKEAKEIDYFLLIWIAGTYLPMLYTSGVVGRIVYPFYFIQTVPALTLGI
                     PYMVSSIIKDRLVRNVILVALMIIVLTVFILYFPVRINEF"
BASE COUNT          888 a          340 c          433 g          752 t
ORIGIN      
        1 acaaaagttc gtgaaagata tatttacaca tatgaaaaga tatctggaag aaaattcaat
       61 tgaataataa acactggaca tatgctgatg ctggtgtaga catcaagaga attaagagca
      121 gtcaaaagga tataggtgaa attctaaaag agacatttac aaatagaaaa ggaaagatag
      181 gtacagttct tgaggacatt ggacattatg caggattaat tgattcagga aaaaattctg
      241 ccattgcact tcatactgat ggagttggaa caaaagtgtt agttgcacaa atgatgaaca
      301 aatttgacac aatcggcatt gattgtgtag ctatgaatgt gaatgatata atatgtctag
      361 ctgctgaacc aatcgctttc cttgattata ttgccttaaa aaaaatggat aaggatctga
      421 ttaaggaaat ttctaaagga ctagttttag gagcaaaaga agcttcagtt gctattattg
      481 gaggagaaac agctataatg cctggtgtta tagacggaga aggcgataaa gcttttgatc
      541 tggttggtat ggtattaggt attgttaata aaaaacaagt aataactgga aatcaaataa
      601 agaaaggcga tattattatt ggagcagaga gttcaggtat acattcgaat ggatattcac
      661 tcataagaaa ggtgctcctt tctaagtata gaatagaaga gcacattggc ttagatgaaa
      721 gtttaggcga agaattgtta aaaccaacaa aaatatatgt taaacctatc cttaatattt
      781 tacgaaaaat aagaccatct ggtctggcac atattactgg tggaggtttt tcaaaattaa
      841 caagacttgt taaagcaaga aatttaggat tcaaaataga taatatgccc aaaccattac
      901 caatatttac attgattcaa gatgaaggaa aaatttctga tttagaaatg tacaggacat
      961 ttaatatggg aattggtttt tgcattattg catcatctgt tgaatctgaa aaaattcaga
     1021 agatccttag acagcacaga attaattcta ctgaaatagg agagatagtt aaagatccag
     1081 gggtatttat aggtggatta aaagttgatt aaatttaaaa ttcattaatt cttacaggga
     1141 aatataatat gaatactgta agaactatta tcataagtgc aacaaggata acatttctaa
     1201 caagcctgtc tttaattatt gaggatacca tgtatggtat acctaatgtt aatgctggta
     1261 cagtttgaat aaaatagaat ggatatacga ttctacctac tacacctgat gtatataaca
     1321 taggtagata tgttccagct atccaaatta acagaaagta gtctatctct tttgcctcct
     1381 ttcttaaaat gttgaatgct gtaaatggaa ctataagcca gatactccac caaataggaa
     1441 tattagtacc tattccatac caagatatag gatgacgtgt ttcagtggtt atacctatta
     1501 tttcttcatt agatttagta gtatgtctaa cttctgctga ttcaacataa tatggggaag
     1561 gtggataatt cggtattggt aaaatccagt tccaagcata attccctgaa ttaacctcac
     1621 tttcatttgt aatggtaagt ccggaagcat aacttacagt atatattaaa tgctctaatg
     1681 cgttatttat tgtcacttta ttggttgctg tattagtaac tgtagaatta tcaatcatca
     1741 ttccaaattc atctggtacc tgaactacag tatgagttat tactatttca gtagaagagg
     1801 atggctgata tacaatgtca tatattgtga caggaataat atatactcca gctagaacta
     1861 gaagaagtat aattgctttg taaagttttg gaagaagttc tttataattt gtgaactgga
     1921 ttctacttgt tatatagaga aatattataa ttatgacata aaatgctgcg gtctctttac
     1981 ttagaaaagc taatcccata gctaatgtag ataaccaata atataatgga atctttagaa
     2041 tctttcttcc tttacgttca aggtagagcc aaaatgaaag aaaagcaaag aaaatagatg
     2101 gaacctctag taaggcaaga ctaccatgaa caaagaacat aacttcgaag cctaacattg
     2161 cagttgcata aacagccaaa ttttttccta agaatcgttt tgaaattaaa tagaatactg
     2221 atagagataa tacactaaag atagttggta ttatccgcca tccaaaccag ttatctccaa
     2281 atatgtaaat acctattgat atccaagctt ttcctaaaaa tggatgctct gggttactac
     2341 ttacaccatt taatatatca cgtgcagctg gaacataaaa tgcttcatcg aatactgtcc
     2401 cttttagtgg aaa
//
LOCUS       DASCQP010000562         4113 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002035952, whole genome shotgun sequence.
ACCESSION   DASCQP010000562 DASCQP010000000
VERSION     DASCQP010000562.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4113)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4113)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4113
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002035952"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..540
                     /locus_tag="QF480_09580"
     CDS             <1..540
                     /locus_tag="QF480_09580"
                     /inference="COORDINATES: protein motif:HMM:NF013077.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HJN06854.1"
                     /translation="HNSKKVSVRQLTDLIDIARITPSSKNQQPLKYLLVTNEDDVNLV
                     ESHLKWAKFLKDWDGPEKKEQPPAYIIMLNDKNLNKQAEIDSGIAAQTILLGAVEKKL
                     GGCILRSVNRPVIAKHFNLSSNLEIIQVIAIGYPNQKIRLTTPNDTESVNYYEGNDGT
                     HYVPKRKLEDIIITPDITH"
     gene            618..1982
                     /gene="hisS"
                     /locus_tag="QF480_09585"
     CDS             618..1982
                     /gene="hisS"
                     /locus_tag="QF480_09585"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013612075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004821 - histidine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006427 - histidyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HJN06855.1"
                     /translation="MVQKPSIPKGTRDFSPEQMMRRNYIFDTIRTIFQKYGYEPIETP
                     AMENLSSLTGKYGEEGDRLIFKVLNSGDFLKNVNPELLSTINSIKLTSEIAEKGLRYD
                     LTVPFARYVVQNRNDITFPFKRYQIQPVWRADKPQKGRYREFYQCDIDVIGSNSLLNE
                     VELIRIIDEVFEKLNIKATIKLNNRKILSAIAQIIDAPDKLVEITTAIDKLGKIGINK
                     VNEELLRKGLTQEKIEFIKPIINLAGSNITKINNLKELLVDNEDGTQGITELQTIINL
                     IEDLKLSAKVVIDLSLARGLNYYTGAIIEVVADDVEIGSICGGGRYDDLTGIFGLPDT
                     SGVGISFGADRIYDVMKEKQLFKEQIQSTTQVMLVNFGGTEGIYALSVLAEIQKAGIR
                     AELYPDSAKMKKQMKYADKKSISNVLLIGDEEMKSGYYTLKNMNTGEQQKVNLTELIT
                     ILKD"
     gene            2122..3135
                     /gene="gap"
                     /locus_tag="QF480_09590"
     CDS             2122..3135
                     /gene="gap"
                     /locus_tag="QF480_09590"
                     /inference="COORDINATES: protein motif:HMM:TIGR01534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0019682 - glyceraldehyde-3-phosphate
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HJN06856.1"
                     /translation="MSKIRIAINGFGRIGRITFRKILEKANMEVVAINDLTDPGNLAH
                     LLKYDSVQRSFVGKVEHNGNHIIVNNKKVIVLNEPDPAKLPWKDLDIDIVIESTGEFA
                     DRLSAIKHVEQSGAKKVIISAPTKGEFDDVSYVVLGVNNEIINRDDVIISNASCTTNN
                     VAPLIKIIDENWGIEKGFITTIHSYTKDQNLVDGPHKDWRRGRAAAYSIVPTTTGAAK
                     AVTKIFPHLKNDMGGAGFRVPVPDGSLTDLTCTLRNSTSVDEINDVFKTASETFMNGI
                     LEYTNDPIVSVDVIGNTHSAVFDANLTAVLGDKNKLIKVVAWYDNEMGYSSRLVELIE
                     KFA"
     gene            complement(3144..3914)
                     /locus_tag="QF480_09595"
     CDS             complement(3144..3914)
                     /locus_tag="QF480_09595"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: protein motif:HMM:NF024258.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008758 - UDP-2,3-diacylglucosamine
                     hydrolase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HJN06857.1"
                     /translation="MKKSKIYFASDFHLGIPDYKSSLIREKKLVNWLDMISGNADEIF
                     LMGDIFDFWFEYKHVIPKGYVRLLGKIAELTDKGIPVNIFKGNHDVWAFDYLSKELNV
                     TLHRKPVIREFDGKKFFLAHGDGLGPGDNGYKFLKKVFEFKPNQFLFRWLHPDIGCWL
                     GLYFSKQSRLANLAKYKKELQEENHDELKYDMLMHYASRKSDENPEIDYFVFGHRHIP
                     VHEKVGDKAEMIVLGDWINYFSYGVFEDGKMNLKYFKD"
BASE COUNT         1453 a          697 c          709 g         1254 t
ORIGIN      
        1 cacaatagta agaaagtgtc agtaaggcag ctgaccgacc taattgatat tgcaagaatt
       61 accccctcat caaaaaacca gcaaccgctg aaatacttac tagttacaaa cgaagatgat
      121 gttaatctgg ttgaaagtca cttaaagtgg gcaaaatttc taaaggattg ggatggcccc
      181 gaaaaaaaag aacaacctcc tgcgtatata attatgttaa atgacaagaa cctcaacaaa
      241 caagctgaga ttgattcagg aatagctgct caaacaatac ttcttggtgc cgttgagaaa
      301 aagttaggcg gatgtatatt gagatcagtt aacagacctg ttatagcgaa acattttaac
      361 ctttcatcca accttgaaat tatacaagtt attgctattg gttatccaaa tcaaaaaatt
      421 cgattaacaa cacctaatga caccgaatct gtaaattact atgaaggtaa tgatggcact
      481 cattatgtgc caaagcgcaa actggaggat attattatta ctcctgatat aactcactga
      541 tcaaatttct ttttatcaat ctgcttccca aaactattga aatttgtact tttgcagcca
      601 atcttatgaa ttaatctatg gtacaaaaac catcaatacc aaaaggaacc agagacttct
      661 caccagaaca gatgatgaga cggaactata tttttgatac aataagaacg atatttcaaa
      721 aatacggtta tgaaccaatt gagactcctg caatggagaa cctatcatct ctaactggaa
      781 aatatggtga agagggagac aggttaatat ttaaggttct taattcagga gattttctta
      841 aaaatgtaaa tccagaatta ctttcaacaa taaattcgat caaattaacc tccgaaattg
      901 ctgaaaaagg attacggtat gaccttacag ttccatttgc gcggtacgtt gtacaaaaca
      961 gaaatgacat tacttttccg tttaaacgat atcagattca accagtttgg cgtgccgaca
     1021 aacctcagaa aggacgttac agagagtttt atcaatgcga tattgatgta ataggttcta
     1081 actccttgct taacgaagtt gagctgatta gaattattga tgaagtattt gaaaaactta
     1141 atattaaggc tacaattaaa ctaaataaca gaaaaatatt aagcgctatt gcacaaatta
     1201 ttgatgctcc ggataaactt gttgaaatca caactgctat cgataaacta ggcaaaatag
     1261 gaattaataa ggttaatgaa gaattactta ggaagggttt aacacaggaa aaaattgaat
     1321 ttattaaacc aattataaat ttggctggca gtaatattac aaaaattaac aaccttaagg
     1381 aattattagt tgataacgaa gatggtactc aaggaattac ggaattacaa actatcatta
     1441 atcttattga agaccttaaa ctttccgcca aagttgtaat agatctgtca ttagctcgtg
     1501 gtttaaatta ttatactggt gcaataattg aagttgttgc cgatgatgtt gagattggaa
     1561 gtatttgtgg tggagggcga tatgatgact tgactggtat atttggatta ccagatactt
     1621 caggtgttgg aatatcattt ggtgccgacc gtatttatga tgtaatgaaa gagaagcaac
     1681 tttttaaaga acaaatacaa agcacaactc aagtaatgct agttaatttt ggaggaactg
     1741 aaggtattta tgcattatct gttcttgccg aaattcaaaa agctggtatt cgtgccgagc
     1801 tataccctga ttcagctaaa atgaagaaac aaatgaaata tgctgataag aaatcaatat
     1861 ccaatgtatt gttaattggt gatgaagaaa tgaaatctgg gtactacaca cttaaaaaca
     1921 tgaataccgg tgaacagcaa aaagttaact tgactgaact tattacaatt ttaaaagatt
     1981 gagagacttt ttgagattat taattaggac aatcgaatat taactgtcca tcctgcattc
     2041 ggatctgttt attgttattt atcgatccaa gttttcatag aaacactttt taattaattt
     2101 tgcgactcta aaaatttaag aatgtcaaaa atcaggattg caataaacgg atttggccgc
     2161 attgggagga taactttcag aaaaattctg gaaaaggcca atatggaggt tgttgcaata
     2221 aatgatttaa cggatcccgg taatcttgcc catttattga aatatgattc tgtgcaaaga
     2281 tcgtttgtag gaaaagttga gcataacggc aatcacatta tcgtaaataa taaaaaagta
     2341 atagtactaa acgaacctga tcctgctaag ttaccttgga aggatctcga tatagatatt
     2401 gttattgagt cgacaggcga gtttgctgat cgccttagtg cgattaagca tgttgaacaa
     2461 tcaggagcaa aaaaagtaat aatatcggca ccaacaaaag gtgaattcga tgacgtaagt
     2521 tacgtcgtat taggagttaa taatgaaatt attaatcgtg atgatgttat catttcaaat
     2581 gcatcatgta caactaacaa cgtagctcca ttaataaaaa taattgacga aaactgggga
     2641 attgaaaaag ggtttattac aactatacat tcatatacaa aagatcagaa tcttgttgac
     2701 ggtcctcata aagactggcg aaggggtcgt gcggcagcat attcaatagt tccaacaact
     2761 acaggtgcgg caaaggcggt tacaaaaata tttccacatt tgaaaaatga tatgggtgga
     2821 gccggtttca gagttccggt acctgatggc tcgcttaccg acttgacttg tacactaaga
     2881 aactcaactt cggttgacga aataaatgat gtatttaaaa cagcatccga aacttttatg
     2941 aatggaattc ttgaatatac taacgatcct attgtatcag tggatgtaat tggcaacact
     3001 cattcagctg tttttgatgc taatttaact gcagttcttg gtgataaaaa taagttgatt
     3061 aaagtagttg cctggtatga taatgaaatg gggtactcta gccgtcttgt agaacttatt
     3121 gagaagtttg cataagtata aagctaatcc ttgaaatatt tcagattcat tttgccatct
     3181 tcaaatactc catagctgaa ataatttatc caatctccca gaactatcat ttctgcttta
     3241 tccccaacct tttcatggac aggaatatgt cgatgtccaa atacaaaata gtcaatttct
     3301 gggttttcat ctgatttacg acttgcataa tgcattagca tatcatattt taattcgtca
     3361 tgattttctt cctgcaactc ttttttgtat tttgcaaggt tagccaatcg gctttgtttt
     3421 gagaaataca atccaagcca gcagccaata tcaggatgta accatctgaa taaaaattga
     3481 ttaggcttaa attcgaacac tttcttaaga aacttatagc cattatctcc aggacccaat
     3541 ccatcaccat gcgcaagaaa aaatttcttt ccatcgaact ctctaataac aggcttccga
     3601 tgcaaagtaa catttaactc tttacttaga taatcaaagg cccatacatc atgattaccc
     3661 ttgaaaatat ttacaggaat acccttatcg gtgagttcag ctattttccc taataaacgc
     3721 acatatccct taggaataac atgtttatat tcaaaccaaa aatcaaaaat atcccccatt
     3781 aggaaaatct catcagcatt accagatatc atgtcgagcc agttaacaag ttttttttct
     3841 cttattaagc tacttttata atcaggtatt cctaaatgaa aatcagatgc aaaatatatt
     3901 ttcgatttct tcaattccta aatttttcaa gtcgagttat atttccttga caatatcttt
     3961 aataagagtt aaaaccttcg gagcaactct tccaaccgct tcaattactt cctgatggga
     4021 aagttcaatt atcttaccag cgacacctaa atcagagatt acagaaatag caaaaacagg
     4081 taatcggatt tgtcttgcca caattacttc tgg
//
LOCUS       DASCQP010000563         2977 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002040841, whole genome shotgun sequence.
ACCESSION   DASCQP010000563 DASCQP010000000
VERSION     DASCQP010000563.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2977)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2977)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2977
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002040841"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            225..1058
                     /gene="tatC"
                     /locus_tag="QF480_09600"
     CDS             225..1058
                     /gene="tatC"
                     /locus_tag="QF480_09600"
                     /inference="COORDINATES: protein motif:HMM:TIGR00945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HJN06858.1"
                     /translation="MEETNTKNDQPKEKVMTFWDHLDELRWHIMRSLIAIVALAIVAF
                     INREIIFDQIILAPSSSEFISNRVLCRLGEWLSLNALCIQDMKLDIINIKMSGQFLTH
                     MYISLVAGFILAFPYILWEIWRFVKPAMKETERKYSSGGVFISSVLFLMGILFSYFLI
                     VPLTVNFLGTYHVSESVHNQISLSSYISTVVSVTFAVGLVFELPILVYFLTKIGMLTP
                     DFMKRNRKYMYVIMLILAAIITPPDMFSQVLVVFPLIILYEFSIGVSNRIYKKSQAEL
                     A"
     gene            complement(1094..1894)
                     /locus_tag="QF480_09605"
     CDS             complement(1094..1894)
                     /locus_tag="QF480_09605"
                     /inference="COORDINATES: protein motif:HMM:NF024109.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HJN06859.1"
                     /translation="MELFYHRYGEKGNQPIIILHGLFGISDNWVSYARRIAMEGFEVF
                     VVDQRNHGQSPQSDNFNYLALTDDLFDFIDDHEIEDPILIGHSLGGKVAMRFALENPH
                     LVKKLVVVDITLKAYGPREHHRKIIDAMKAIDFSKVVTRSDVEKQLAASIPELRIRQF
                     IMKNLHRNDKNDFEWRIYLAGLENNLDKMFDAIETTTKFEKPTIFIKGGASDYILLED
                     FDQIRYNFPNAEIITIEGASHWVHVEAMERFYQLTMGFATGQPSWYKN"
     gene            complement(2126..>2977)
                     /locus_tag="QF480_09610"
     CDS             complement(2126..>2977)
                     /locus_tag="QF480_09610"
                     /inference="COORDINATES: protein motif:HMM:NF012707.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HJN06860.1"
                     /translation="DLLKAIESGEVDIAISPLMVTSTRIREFGFTQPYYITNLAYATK
                     SDMDKDFITLISNIFSVGFLKSLIPLLLIISIFGTIIWALERKRNAKQFGKGIHGVGS
                     GIWWSAVTMATVGYGDKSPITPIGRLISIIWMFTAVIMISGLTASISSSLTINRLKTE
                     ISSFDDLRKSEVGCIPGSGSSELLDLYRIQYSNYNTVEDGLIAVDNDKISAFVYDDAV
                     LNYAVHSSKLDERIEIVPTSYAKEYFSFASSNYALLARVDRILLEIIESADWERDLQK
                     YHIEYRH"
BASE COUNT          928 a          561 c          482 g         1006 t
ORIGIN      
        1 caaattgtgt tcacgtaaca gcacctaacc ttttaggttt tttcttcctg agaggttgaa
       61 tatagcaaat acttattatt tcgaccttta aggtgcaagg ccacctaaga ggacagcact
      121 ttcccgttgt tggcgaaaaa gccaattata gaaagaatac aaattgatta aaaacctctt
      181 caataatggc gaggtttttt tacttttggc aattcaatta ccaaatggaa gagactaaca
      241 caaaaaatga tcagccaaaa gaaaaggtaa tgaccttttg ggatcacctt gatgagttga
      301 ggtggcatat tatgaggtct cttattgcta ttgttgcact tgcaattgtt gcgtttatta
      361 accgtgaaat tatttttgat caaataatac tggcacccag cagttctgag tttatttcaa
      421 acagggtatt atgccgactt ggagaatggc tgtcattaaa tgctctttgc atacaagaca
      481 tgaagcttga tataatcaac attaaaatgt cagggcagtt tcttacacat atgtatattt
      541 cattagttgc aggctttatt ctggcttttc cttatatatt atgggaaata tggcgatttg
      601 ttaaaccagc aatgaaagaa actgaaagaa aatattcaag tggtggagtt ttcatcagtt
      661 cagtattgtt tttaatgggc atcctattca gttacttttt aattgttcca ttaacagtta
      721 attttttagg cacttaccat gttagtgaat ctgttcacaa tcaaatatcc ctttcctcat
      781 atattagcac ggttgtttcg gttacatttg ctgtaggact tgtttttgaa ctgccaatac
      841 tggtttactt tctaacaaag ataggtatgc ttactcctga ttttatgaaa cggaacagaa
      901 agtatatgta tgttattatg ctgatactag cggcaattat tactccacct gacatgttta
      961 gccaggttct tgttgttttt ccactcatta ttttgtatga attcagtata ggggtatcta
     1021 acagaatata caagaaaagt caggcagaat tagcttaact tctttcctga ttcacaggac
     1081 aaatctgcta acattaattt ttataccatg atggttgtcc tgttgcaaat cccattgtta
     1141 gctgatagaa tctttccata gcctcaacat gaacccagtg tgatgcacct tctattgtaa
     1201 taatctcggc atttgggaaa ttatatctaa tctgatcgaa atcttcaagt aatatataat
     1261 cggatgcacc ccccttgata aatattgttg gcttttcaaa ctttgttgtt gtctcaatgg
     1321 catcgaacat cttatcaaga ttattctcaa gtcctgccag gtagattcgc cattcaaaat
     1381 catttttatc attacggtgc agattcttca taataaactg gcgaatccgt aattcaggaa
     1441 tagaagctgc caactgtttt tccacatcac ttcgtgtaac aactttacta aaatcaatag
     1501 ctttcattgc atctattatc tttcgatgat gttcgcgagg cccataagct ttgagggtaa
     1561 tatcaacaac aacaagtttt tttacaagat gtggattttc gagggcaaaa cgcattgcta
     1621 ccttcccacc aagagaatgg ccaattaata tcgggtcctc aatttcatgg tcatcaataa
     1681 aatcgaacag gtcatctgtt aaggctaaat agttgaaatt gtcactttgt ggagactggc
     1741 catgatttcg ttgatcgact acgaatactt caaatccttc cattgcaatc cgacgagcat
     1801 aactcaccca attatctgag ataccaaaca aaccatgtag tattattata ggctgattgc
     1861 ctttttcacc atatctatga tagaataatt ccattgtgta aaattatgaa attaagggga
     1921 agtattgtgg gtattgttct gctatataat cgataatttt aaaccgaata ttactaattt
     1981 taaacttttt aaccaataac tcaaaatcat ggttatcagg ctgttgcaca ccacaactat
     2041 cattgggcaa ttttgaaccg agctttctta actgctctgc tttacttatt gctgctatat
     2101 ggtaccctgt aacaaacgta ctattctaat gtctgtattc gatatgatat ttttgcagat
     2161 cccgttccca atcggcactt tctattatct ctaaaagaat cctgtcaact cttgcaagta
     2221 gcgcgtagtt agaagatgca aaactgaaat attctttagc atatgaagtt ggaacaatct
     2281 caattctttc atctaatttg ctactgtgta cagcataatt taacacagca tcatcataaa
     2341 caaaagctga aatcttgtca ttatcaacag ctataagacc gtcctcaact gtattataat
     2401 ttgaatactg tattctataa aggtctaata attcagaaga tcctgaacca ggaatgcagc
     2461 caacctcaga ttttctaaga tcatcaaaac tactaatttc cgtctttaat ctgtttatcg
     2521 ttaagctgga acttatacta gctgttaaac ccgatatcat tataacagct gtaaacatcc
     2581 atataattga tattaatctg ccaataggcg taataggtga cttatctcca taaccaacag
     2641 ttgccatagt tacagccgac caccaaatac ctgacccaac accatgtatt cctttaccaa
     2701 attgctttgc atttctcttc cgttccagag cccaaataat agttccgaag attgatataa
     2761 tcaatagcaa tggaattagt gattttaaaa acccaactga gaaaatattt gatattaatg
     2821 taataaaatc tttatccata tcggatttcg ttgcatatgc aaggtttgtt atataatatg
     2881 gttgcgtaaa cccaaattct ctaatccgtg ttgaagtaac cattaatgga gatatcgcaa
     2941 tatcgacttc gccactttct atcgctttta agagatc
//
LOCUS       DASCQP010000564         2381 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002040936, whole genome shotgun sequence.
ACCESSION   DASCQP010000564 DASCQP010000000
VERSION     DASCQP010000564.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2381)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2381)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2381
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002040936"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1668
                     /gene="feoB"
                     /locus_tag="QF480_09615"
     CDS             <1..1668
                     /gene="feoB"
                     /locus_tag="QF480_09615"
                     /inference="COORDINATES: protein motif:HMM:TIGR00437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015093 - ferrous iron transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein B"
                     /protein_id="HJN06861.1"
                     /translation="NYGNIIEQSIKKLQRLIRIDDNKALTNKVSPRYLAIKLLEQDKE
                     ELKRINICTNAEEIKSESLAESERIASLRNENVETIITDAKYGFIEGALKESLKQAPK
                     HNKITRSRIIDNIVTSKLLSYPIFLLAIWITFQSTFIIGDYPMQWIELLVKYLGTLFS
                     AILPDGMIKDMLIDGILGGVGGVIVFLPNILILFFFLTVMEASGYMARVAFIVDKLMH
                     KVGLHGKSFVPMLMGFGCNVPAIMATRTIENKSDRLVTMLITPLMSCSARYPVYILLI
                     NAFFINYRGSVLFGIYFVGIILAGMVAWILKKSLFKVETVPFVMELPPYRKPQLKAVI
                     KQTWFKGEQYLRKMGTIILVASIVVWALGYFPVNNEINIKYDGQIATIKSQISEQNSQ
                     KKNDELIQSIKRLNSTKLSEKQENSYIGKIGKFIEPAVKPLGFDWKMGIGLIAGSAAK
                     EIVISTLGVLYQSSSDVEDTQLLVTKIKAQVYESGPHKGKHVFTPLVAISFMLFILIY
                     FPCIAVVAAIKNESGNWKWALFLTVYTTALAYLISFLTYQTGTLLGL"
     gene            1777..2124
                     /locus_tag="QF480_09620"
     CDS             1777..2124
                     /locus_tag="QF480_09620"
                     /inference="COORDINATES: protein motif:HMM:NF013767.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009927 - histidine phosphotransfer kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hpt domain-containing protein"
                     /protein_id="HJN06862.1"
                     /translation="MGAINKAQFIENFQYFDKEIVLEIIDIFLKEYPERIKTIAADIE
                     AGDCDNLKFNAHSIKGVIANFVAPDAEQCARELEIMATEKNMDGVKELFVEFKESSES
                     MVDELKELRENFT"
     gene            complement(2148..>2381)
                     /locus_tag="QF480_09625"
     CDS             complement(2148..>2381)
                     /locus_tag="QF480_09625"
                     /inference="COORDINATES: protein motif:HMM:NF025910.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HJN06863.1"
                     /translation="IYLVELEDFENAKLMFQEAVLINPRFVEAIYNLGRTMEAMGDYN
                     EAREQYKISLELLPNYPLAVQGMNRLDDMLRPK"
BASE COUNT          811 a          356 c          459 g          755 t
ORIGIN      
        1 aattacggta atattattga acaatcgata aagaaactac agcgtttaat taggatcgat
       61 gacaacaaag cattaacaaa taaagtatca ccacgatatc tggcaataaa acttctggaa
      121 caagataaag aagagcttaa aagaataaat atctgtacca atgcggaaga gataaaaagt
      181 gaaagtttag cggaatccga aaggatagct agtttacgga atgaaaacgt tgaaacaata
      241 atcactgatg cgaaatatgg atttattgaa ggggcgttaa aagaaagttt aaaacaagca
      301 cctaaacata acaaaattac tcgaagcagg attattgata acatcgttac gagcaaattg
      361 ttaagttatc cgattttctt gttagcaatc tggattacgt ttcaaagcac atttataatt
      421 ggcgattacc caatgcaatg gatagaatta cttgttaagt atctgggcac tttattctca
      481 gcaattcttc ctgacggtat gatcaaggat atgctaattg atggtatatt aggcggagtt
      541 ggaggcgtaa ttgtttttct tcctaatatt cttattctgt tcttcttttt aacagtcatg
      601 gaagcatcag ggtacatggc cagagttgct tttattgttg ataaactgat gcataaggtt
      661 ggccttcatg gtaaatcttt cgtgccaatg ctaatgggtt tcgggtgtaa cgtacctgcg
      721 ataatggcaa cccgaacaat agagaataaa agcgataggt tggtgacaat gcttatcacc
      781 cctcttatgt cgtgcagtgc aagatatccg gtttatatac tgttgataaa tgctttcttt
      841 ataaattata gaggaagtgt attatttgga atttattttg ttggaataat attggcaggt
      901 atggttgcct ggatattgaa aaaatcgctt ttcaaggttg aaactgttcc ttttgttatg
      961 gaattaccac catatcgcaa acctcaactt aaagctgtta taaagcaaac atggtttaaa
     1021 ggtgagcagt atctaagaaa gatgggtacg attattttgg tcgcatcgat tgttgtatgg
     1081 gcacttggat attttccagt aaacaatgaa ataaatatta aatatgatgg tcagattgca
     1141 actattaaat cacagatctc agagcaaaat agtcaaaaga agaacgatga actcattcag
     1201 tcaataaaga gactaaattc aacaaaatta agtgaaaagc aagaaaactc atacattgga
     1261 aagattggta agtttattga gccagcagtt aaaccacttg gattcgattg gaaaatggga
     1321 ataggcctta ttgcaggatc agccgcaaaa gagattgtta taagtacatt gggagtactg
     1381 tatcaatcga gtagtgatgt tgaagatact caattgctcg ttactaaaat aaaagcccag
     1441 gtttatgaaa gtggccctca caaaggcaag catgtattta ctccattagt ggcaatatca
     1501 tttatgctgt ttatactaat atattttcct tgtattgctg ttgttgctgc tattaaaaat
     1561 gaatctggaa attggaagtg ggcgttgttt ttaacagttt atacaactgc acttgcttac
     1621 cttatttcat tcttaaccta tcaaacgggt actttgttgg gtttatgatc attaacagtt
     1681 aggggtgctg aattatttta cctttgtctt tcttaagaat aaagtttttt taactttgtc
     1741 atagtttgat cactatttta gcaacactaa taacccatgg gagcaattaa caaagcacaa
     1801 ttcattgaaa attttcaata ttttgataaa gaaatagtac tggaaataat tgatatcttt
     1861 ttaaaagagt atcccgaaag gataaaaacg attgccgcgg atattgaagc aggtgattgt
     1921 gacaatctca agtttaatgc gcacagtatt aaaggagtta tagcgaattt tgtagctcca
     1981 gatgcagaac aatgtgcaag agagcttgaa attatggcta ccgaaaaaaa tatggatgga
     2041 gttaaagaat tgttcgtaga gtttaaagaa agtagtgaat ctatggttga tgaattaaag
     2101 gagttaagag aaaactttac ttaacctatt tacgtccgta aaccatgtta ctttggccta
     2161 agcatatcat caagcctgtt catcccctgt actgctaatg gatagtttgg taacaattct
     2221 aaagatatct tatattgttc acgagcttcg ttataatcgc ccatagcttc cattgttcta
     2281 cccagattat aaattgcttc aacaaatcgg ggattaatta aaacggcttc ctgaaacatt
     2341 aatttagcat tttcaaagtc ttcaagctca actaaatata t
//
LOCUS       DASCQP010000565         7649 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002041941, whole genome shotgun sequence.
ACCESSION   DASCQP010000565 DASCQP010000000
VERSION     DASCQP010000565.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 7649)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7649)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7649
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002041941"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            12..83
                     /locus_tag="QF480_09630"
     tRNA            12..83
                     /locus_tag="QF480_09630"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:44..46,aa:Met,seq:cat)
     gene            complement(264..479)
                     /locus_tag="QF480_09635"
     CDS             complement(264..479)
                     /locus_tag="QF480_09635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06864.1"
                     /translation="MKTSCEKMMIFYLLFTHGKGHIEDEIFETYRARTRRIIVTIGSV
                     FDTFWEARQNEFIRSFRTWIDQIREGI"
     gene            complement(549..1307)
                     /gene="istB"
                     /locus_tag="QF480_09640"
     CDS             complement(549..1307)
                     /gene="istB"
                     /locus_tag="QF480_09640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005839930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21-like element helper ATPase IstB"
                     /protein_id="HJN06865.1"
                     /translation="MKTIELIRQYAEVLRLTQIKRNPEAFIHQAQIDKPGYQDFIKQL
                     LETEVVHRQRTDYERRYKMARLPKDHELDNYDYNISNGLGKTQLIQLRELLWLEQNYN
                     LVLMGPSGVGKTYIAAGLICDAVKAGYKAYFKTMQELINILSMREMTTTAMNAYNRLL
                     KANLVAIDDIMLFPVKKNEAVALFNLIDHLHENCSLIITTNKSPKQWAETLDDEVLAS
                     ALLDRILYRCEVIKLQGSSYRMQNRKTIFESKIK"
     gene            complement(1304..2857)
                     /gene="istA"
                     /locus_tag="QF480_09645"
     CDS             complement(1304..2857)
                     /gene="istA"
                     /locus_tag="QF480_09645"
                     /inference="COORDINATES: protein motif:HMM:NF033546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HJN06866.1"
                     /translation="MKHLKKVFMWYKVKELSETGLNKSQIARELGIYRATVRRYLGME
                     EEEFHKWLEQPRHFPAKLAGYHDFIKNQLMQQSFLSAAQIEDRLKEHFPGKINVHSKT
                     IYNFVQQIRRDNNLPKPKKDTDRAFQKLADTDYGAQAQVDFGEFNIQTNTGTRIKVYF
                     FAMVLSRSRQKFVWFSTVPFTSTIAIEAHQKAFLYYQGVPKQIIYDQDKVFLKDENLG
                     DFILTKEFGRFVESEPFSPIFCRKSDPQSKGKIENVVGYVKKNFLRGRIFYSLDQLNK
                     DAIAWLERTANAKRHGTTWEIPIDQWNKEKPYLLPIKSIFKFESRPSELTYKVRKDNT
                     ITYKGNYYSLPIGTYKGQYSQVIIKLHKEMLQIFNMKHQPITEHQVSHLKGRLISKTD
                     HSRDKSKSIKQREDQVRQLLGNSEKGNYFLQQIKTGKPRYYHDNLRLIIRKLKEKEIK
                     YIELALDFCLENELYNANRLAELVKYYRVQDQDQIPHSITRVNLPQKAYSLPQTSNIN
                     TYESLIKNI"
     gene            complement(2929..3279)
                     /locus_tag="QF480_09650"
     CDS             complement(2929..3279)
                     /locus_tag="QF480_09650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06867.1"
                     /translation="MPMNWEALGAIGDLVAGVAIVITLVFLAFQTRSNTAAIRAHAVQ
                     DLLLKSADIYIATISDNNLMEIFGEKLPNGVPLTPTEQAKVWRMLHGILTNLQFGFVQ
                     HGVISIFVSSNFRN"
     gene            complement(3603..4073)
                     /locus_tag="QF480_09655"
     CDS             complement(3603..4073)
                     /locus_tag="QF480_09655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002558841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CYTH domain-containing protein"
                     /protein_id="HJN06868.1"
                     /translation="MALEIEKKFLVKGNFKLKATDKTRITQGYLSSDQKRTVRVRITG
                     NKGYLTIKSSLNQTSVSRFEWEKEIPIKDAKELLKICEPGIINKTRFIVPEKTGLKFE
                     VDEFHDDNEGLTIAEIELPTEEYIFEKPVWLGKEVTNDSRYYNSVLINNPYTKW"
     gene            4266..5768
                     /locus_tag="QF480_09660"
     CDS             4266..5768
                     /locus_tag="QF480_09660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018337167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GH3 auxin-responsive promoter family protein"
                     /protein_id="HJN06869.1"
                     /translation="MAFVNSILNWWIKKRIHQIELFSKYPIEVQNDVFKKLINAARDT
                     EWGKQYGYKTINSLSKFQSRVPISSYEDLKPFIDRLRKGEQNVFWPEEITWFAKSSGT
                     TAGRSKFIPVSPSALEECHYKGGKDMLALYFNLYPDSELFEGKSLVMGGSRNILEVSH
                     TTYIEGDLSAILMHNLPFWAQFKRTPSLTIALMDEWENKLELMAESTMGHDVRSISGV
                     PSWMLVLLRKILKKSGKENLHEIWPNLEVFFHGGINFEPYREQYSSILSHEKIAYSNT
                     YNATEGFFAIQDQKNSTDLLLMLDYGIYYEFLPVSSIDLGKQETVQLADVIIGVNYAL
                     IISTNAGLWRYMIGDTVMFTSKSPFRIRITGRVKNYINAVGEELIIDNAEKALSIACS
                     KTGAIINEYTAAPLFENDEVVHQWLIEFEKKPEDNDFFNEAFDNALKSLNSDYEAKRY
                     HNLVLKQPIIVNLKKNTFYKWMKKRNKLGGQNKVPRLSGSREYVNEILNV"
     gene            5824..6435
                     /locus_tag="QF480_09665"
     CDS             5824..6435
                     /locus_tag="QF480_09665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007134449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxynucleoside kinase"
                     /protein_id="HJN06870.1"
                     /translation="MHVAIAGNIGSGKTTLTKLLAKHFGWKPHYEDVENNPYLHSFYE
                     DMQRWSFNLQVYFLNSRFRQVVDIRKSGKNIIQDRTIYEDAYIFAPNLHTMNLMSTRD
                     FDNYSSLFELMNSFIQPPDLLIYLRASVSTLVKQIQSRGRDYEESIRLDYLKLLNERY
                     EAWMQGYVSGKVLIVNVDDLDFNSPEDLSIVIEKVNAEVHGLF"
     gene            6512..7258
                     /gene="kdsB"
                     /locus_tag="QF480_09670"
     CDS             6512..7258
                     /gene="kdsB"
                     /locus_tag="QF480_09670"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009137894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008690 - 3-deoxy-manno-octulosonate
                     cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HJN06871.1"
                     /translation="MKSIGIIPSRYASTRFPGKPLVEIKGKTMIQRVYEQSVKSIYLS
                     KVIVATDDDRIYNHVKSFGGEVLMTDINHTNGTSRCNEIISLLEKKGENYDIAVNIQG
                     DEPNINPEQIDSVVALFDNSNVQIGTLAKKVSSNDELFDPNVVKVVIGNDYNALYFSR
                     HAIPVLRGIDQDSWLNNFIFFKHIGIYSYRTSVLKAIAIMPVGQLEQAEKLEQLRWLE
                     NGISISVDITDYESVAIDTVDDLQKLENIS"
     gene            7312..>7649
                     /locus_tag="QF480_09675"
     CDS             7312..>7649
                     /locus_tag="QF480_09675"
                     /inference="COORDINATES: protein motif:HMM:NF037744.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0030527 - structural constituent of
                     chromatin [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HJN06872.1"
                     /translation="MKIAKYIGDLLYDYECVVIPGLGGFLTNDNPVSINEVTYSFSPP
                     FRKIHFNVYLRTNDGLLVNHIAQQEQIGYKTAKQKVDQFVFQCHNALETGRRIKFQNI
                     GSLYYDGDKN"
BASE COUNT         2385 a         1307 c         1366 g         2591 t
ORIGIN      
        1 taaaaatata ttgcggggtg gagcagaggt agatcgatgg gctcataacc caaaggtcgt
       61 cagttcgaat ctggaccccg ctacaatgaa aaacctcaca cgaaagtgtg gggttttttt
      121 atttgcagaa ggcagcaaat tgatttgcta gccgtggtgc aaatcaataa gccacaaacc
      181 ctacgggttt gggttttcat tgtaaagccc cctataccag ataaacgaca ggtagggagt
      241 taatctggcc cctcatctgc atgttagatg ccttccctga tctgatcaat ccaagttctg
      301 aaacttctta taaattcatt ctgacgtgct tcccaaaaag tatcgaatac actaccaatg
      361 gttactatta tccttcgagt tctggcacga tatgtttcaa agatctcatc ctcgatatgt
      421 cctttgccgt gtgtaaatag caaataaaaa atcatcattt tttcgcaact agttttcatc
      481 actttttttt tttaaagaaa gagggtattg cagatggaag cgtagcgaca gaagcaatac
      541 cctctttctt attttatttt actctcaaaa attgtttttc tattttgcat tctatagctg
      601 ctcccttgta gctttatcac ttcacatcgg tacagtattc tgtcaagtaa agcacttgct
      661 agtacttcat catctaaagt ttcagcccat tgtttaggag atttatttgt tgttattatt
      721 aaggaacagt tttcatgtag atgatcaatc aagttaaaca atgctaccgc ttcatttttc
      781 ttaacaggga acaacataat gtcatcaata gcgacaaggt ttgcttttaa caatctatta
      841 tatgcattca ttgctgtagt agtcatttct ctcatagata aaatatttat aagttcttgc
      901 attgttttaa agtaggcttt atagccagct tttacggcat cacagatgag tccggctgct
      961 atgtatgttt tacccactcc agatggcccc attagcacca ggttataatt ttgttccagc
     1021 cataatagtt cacgtaactg aataagttgt gtttttccaa gcccattact tatattatag
     1081 tcgtagttgt caagctcatg atcttttggt aatctagcca tcttatatct tctttcataa
     1141 tctgtccgtt gacgatgaac aacctctgtt tccagtagtt gcttaataaa atcttgataa
     1201 cctggtttat ctatctgggc ttggtgtatg aatgcctccg ggtttctttt gatttgtgtt
     1261 aatcgcaaaa cttctgcata ttgacgtatc agttcaatgg ttttcatatg tttttaatta
     1321 atgattcata ggtgttaata ttgctggttt gtgggagact ataagctttc tggggcaaat
     1381 taactcttgt gatagaatgc ggtatctgat cttgatcttg cactctatag tattttacta
     1441 attctgctag acggttagca ttataaagtt cattctcgag acaaaaatca agtgctagct
     1501 caatatattt gatttctttt tctttgagtt ttctgataat caatcgcaag ttgtcgtgat
     1561 aatatcttgg tttacctgtt ttaatctgtt gaagaaaata gttgcctttt tcactattac
     1621 ctaataactg cctgacttgg tcttcacgtt gtttgatgct ttttgattta tctcggctat
     1681 gatctgtttt actgatcaat cgccctttta aatgagatac ttgatgttct gtaataggct
     1741 gatgcttcat gttaaatatt tgcagcatct ctttatgcag ttttataatc acctgactgt
     1801 attgcccttt ataggtccca attggcaaac tatagtagtt ccctttatag gtgatagtgt
     1861 tgtccttacg taccttgtaa gttaactcag agggtcgaga ttcaaattta aaaattgatt
     1921 ttatgggtaa tagataaggc ttttctttat tccactggtc aattggtatc tcccatgttg
     1981 taccatgacg ttttgcattt gctgttcgct ctagccacgc tatagcatct ttgtttaatt
     2041 gatccaaact gtaaaagatt cgtcctcgca gaaagttctt ctttacataa cctactacat
     2101 tttctatctt acctttcgat tgaggatctg attttctgca aaatatggga ctaaatggtt
     2161 cactttcaac gaaccttcca aattctttgg tcagaataaa atctccaaga ttctcatcct
     2221 tcaagaagac cttatcttga tcataaatta tttgttttgg aactccctga tagtacagga
     2281 atgctttttg gtgagcttct atcgcaattg tacttgtaaa aggaactgtt gagaaccaaa
     2341 caaatttctg tcttgaacgt gatagaacca tcgcgaagaa atacaccttt attcgagtcc
     2401 ccgtgttggt ttgtatatta aactctccaa aatcaacctg agcttgagcc ccataatccg
     2461 tatcagctaa cttttgaaaa gccctgtcag tatctttttt gggctttggc aagttgttat
     2521 ctctcctaat ctgttgcaca aagttgtata ttgtttttga gtgtacattg atttttccgg
     2581 gaaagtgttc ttttagtcta tcttctattt gagctgctga aagaaaggac tgttgcatta
     2641 gctgattctt gataaaatca tgataaccgg caagtttagc aggaaaatgt ctgggttgtt
     2701 caagccattt atgaaattct tcttcttcca tcccaagata tctacgaact gtggctcggt
     2761 aaattcctaa ttctcgagca atctgagatt tatttaatcc tgtttctgat aattctttaa
     2821 ctttatacca cataaatacc ttttttaggt gtttcattgt taccttcatc ttttttgtat
     2881 ttggaacctc taagatgaag gttttttatt tccttatagt gatgattctt agttgcgaaa
     2941 atttgatgaa acaaagatgc taattacacc gtgttgcacg aacccgaatt ggagattcgt
     3001 gaggatgccg tggagcatcc tccatacctt tgcttgctcg gtaggtgtta ggggcacgcc
     3061 gttcggaagt ttctctccaa agatctccat aagattgtta tctgaaatag tggcaatata
     3121 gatgtcagcc gactttaaga ggagatcttg tactgcatga gcacgaatag cagctgtatt
     3181 tgaacgagtt tgaaatgcga gaaacactaa ggtgataaca atagccaccc ctgcaactaa
     3241 atctccaata gcacctagtg cctcccagtt cattggcatc taacataata ttttactgcc
     3301 aaaagcggca taaaaaacaa atataagtac attatccggt atttcaaaaa aaatcatgtt
     3361 tatttataat aagacatatg ttagtagatt atagcaaaat gcagcataat atgttgtatt
     3421 taggcgaata ttttgattta attgtttgat taaataagat gatattttgc ttgctcaggt
     3481 aaaagccctc ctcttagcag ataaacgacc acagggagtt aatctggcct gtaacccgat
     3541 taaagatgat gttcttagtt aatctttaga tcagtgtgcc agaccgttac ataaaatatt
     3601 tattaccact ttgtataagg attatttatt agcactgaat tataatatct ggagtcatta
     3661 gttacttctt tacctagcca aactggcttc tcaaatatat attcttccgt aggtaattcg
     3721 atctcagcaa tagttaaacc ttcattatca tcgtggaatt catccacttc aaattttaat
     3781 cctgtttttt ccggtacaat aaatcgggtt ttatttatta taccaggttc acaaatctta
     3841 agtagttcct tagcatcctt aataggaatt tccttttccc attcaaatcg actaacactt
     3901 gtttggttta gactgctctt aatagttaaa tatcctttgt tacctgtaat tcgaactctt
     3961 acagtcctct tttgatcaga tgataagtaa ccctgagtaa tccttgtttt gtcagtcgct
     4021 tttagtttaa agttaccttt caccaaaaac tttttttcaa tttcaagtgc catccaatat
     4081 ttatagtttt ctattaatgt ctgaacatgg ccttcctaaa attctaagat agaaactact
     4141 accttttcct aattcgctct cagcccattt cttatcggtt ccttaaacga aattaacaaa
     4201 aaataaaatg taaatcctta caattttctt tatttttgac agccctttta gtaaaaagga
     4261 tagatatggc ttttgtaaat tcaatactta actggtggat taaaaaacga attcatcaaa
     4321 tcgaactttt cagcaagtat cctattgaag tgcagaatga tgtatttaag aagcttataa
     4381 atgcagcacg cgatacagag tggggtaagc agtatggtta taaaaccata aactcattga
     4441 gtaaatttca aagcagagta ccaattagct catatgaaga cctgaagcca tttatcgata
     4501 gattgcgcaa aggtgaacaa aatgtatttt ggcctgaaga aattacatgg tttgcaaaat
     4561 cgtctggaac aaccgcaggc agaagtaaat ttattccggt aagtccctca gctcttgaag
     4621 aatgccacta taaggggggt aaagatatgt tagcccttta tttcaattta tatccagact
     4681 cagaactttt tgaaggaaag agtcttgtaa tgggaggaag caggaatata cttgaagtta
     4741 gtcacacaac ttatatagaa ggtgatttat ctgcaatatt aatgcacaac ttaccttttt
     4801 gggctcagtt taaacggact ccttcattaa ccattgcttt aatggatgaa tgggagaaca
     4861 aacttgaact aatggctgag tcaaccatgg gtcatgatgt aagaagtatt tcaggtgtac
     4921 catcatggat gcttgtactg ctacgcaaga tacttaaaaa atcaggtaag gaaaatttac
     4981 atgagatttg gcctaactta gaggtatttt tccatggcgg gataaacttt gaaccatatc
     5041 gtgaacagta cagtagcatt ctttcgcacg aaaaaattgc gtattctaat acttataatg
     5101 ctacggaagg tttctttgct attcaggatc agaaaaatag cactgatctg cttttaatgc
     5161 ttgactatgg tatctactat gaattcttac ctgttagcag tatagattta ggtaagcagg
     5221 aaactgtgca attggctgat gtaattatcg gtgttaacta tgctttaatt ataagtacca
     5281 atgcaggtct ttggcgatat atgattggcg atacagttat gttcacaagt aaaagcccgt
     5341 ttagaatacg tataactggg agggtaaaaa actatataaa tgcagttggc gaggagttaa
     5401 taatagataa tgctgaaaaa gctctatcta tagcttgttc aaaaactggc gccataatca
     5461 atgagtatac agcagcccca ttgtttgaaa atgatgaggt agtacatcaa tggttgatag
     5521 aatttgagaa gaaaccggaa gacaatgact tttttaatga agcatttgat aatgcattga
     5581 aatctcttaa ttctgattat gaggcaaagc gatatcacaa tctcgtactt aaacaaccca
     5641 taattgtaaa tctgaaaaag aatacatttt acaaatggat gaagaaacgc aataaattag
     5701 gcggacaaaa taaggttccc cgattatcgg gaagtcgtga atatgttaat gagatactta
     5761 atgtgtaatt gtttttataa attttaataa caaattgtat actttcgtaa aaaataataa
     5821 tacatgcacg tagcaatagc tggtaatatc ggttcaggta aaacaacact tacaaagctc
     5881 ttggccaaac attttggctg gaagccgcat tacgaagacg tcgaaaataa tccttatctc
     5941 catagcttct atgaggatat gcaaagatgg tcttttaatt tgcaagtgta ttttctaaat
     6001 tcaaggttca gacaggttgt agatattaga aaaagcggga aaaatattat tcaggatagg
     6061 acaatatatg aagacgctta tattttcgct cctaatctac atacaatgaa tttaatgtcc
     6121 acaagagatt ttgataacta cagttctctg ttcgagttga tgaattcatt tatccaacca
     6181 cctgatttat tgatttattt aagggcatct gtatcaacac ttgttaaaca aattcaatcc
     6241 agaggacgtg attatgagga gtcaataagg cttgattatt taaaactcct taatgaaaga
     6301 tatgaagctt ggatgcaggg atatgtttcg ggtaaggtcc tcatagttaa cgtagatgat
     6361 ttggatttta actcccctga agatctaagc attgttattg aaaaagtaaa tgctgaagtt
     6421 catggactat tttaattaga atacagttta atatctgtcc tgaattttga tacttatttt
     6481 ctaactctta gttgaaaaca aactaccaca aatgaaaagc attggtataa ttccatccag
     6541 gtatgcgtct acccgttttc cggggaaacc tttagtggaa attaagggta aaaccatgat
     6601 acaaagagtt tatgaacaat ccgtgaaatc aatatatcta tcaaaagtta ttgtagcaac
     6661 ggacgatgat cggatttata atcatgttaa aagttttgga ggagaagtgt tgatgactga
     6721 tataaaccat accaatggca catcacgctg taacgaaata atctcattgc tggaaaaaaa
     6781 aggtgaaaat tatgatatag cagtgaatat acaaggtgac gaaccaaata ttaatcctga
     6841 acaaattgat agtgttgtag ctcttttcga caacagcaat gttcaaatag gtacacttgc
     6901 taaaaaagta agctctaacg atgaattgtt cgacccaaat gttgtaaagg ttgtaatagg
     6961 aaatgattac aatgcattat attttagtag gcatgcaata ccagtacttc gtggtattga
     7021 tcaagacagt tggttgaata atttcatctt ctttaagcac attggaatat acagctatag
     7081 aacaagcgtc cttaaagcga ttgctataat gccagtcgga caacttgaac aagcagaaaa
     7141 actagaacaa ctccggtggc ttgaaaatgg tatttccatt tctgttgata ttactgatta
     7201 tgaaagtgtt gctattgaca cagttgatga cttacaaaaa cttgaaaata tttcttgata
     7261 ttaacgatca tattgtttag tttagcaggt tcggaataga agttttgtga gatgaagata
     7321 gcaaagtata ttggtgattt attgtatgat tatgaatgcg tagttattcc aggtttagga
     7381 ggatttctaa ctaatgataa cccagtatca atcaatgaag ttacgtatag cttttcacct
     7441 ccgttccgta aaatacattt taatgtctat ttaagaacca acgacggctt acttgtaaat
     7501 catattgcac aacaagagca aataggttat aaaaccgcaa aacaaaaagt tgaccagttt
     7561 gtttttcaat gtcataatgc attagaaacg ggaaggagaa tcaaatttca aaatattggt
     7621 tccctttatt atgatggtga caaaaatat
//
LOCUS       DASCQP010000566         3113 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002042567, whole genome shotgun sequence.
ACCESSION   DASCQP010000566 DASCQP010000000
VERSION     DASCQP010000566.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3113)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3113)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3113
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002042567"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1401
                     /locus_tag="QF480_09680"
     CDS             <1..1401
                     /locus_tag="QF480_09680"
                     /inference="COORDINATES: protein motif:HMM:NF013779.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008234 - cysteine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C10 family peptidase"
                     /protein_id="HJN06873.1"
                     /translation="WNCMTDVINNNYIWEIAEIGFHAGVGVEMMYGGDGSGAYSNDVP
                     YALIHYFNYQSSVQYLTKNSYPNSTWENMMQTELDNLRPMYYSGQSTSGGHAFVCDGY
                     QGMNYYHFNFGWSGSGNGYYSLQNVNGFNTYQGMVRNIYPSDPAYPYIAAGQTDLITF
                     VGSFTDGSGPIEDYPTGMDASWLISPQNETDSVTSVTISFIEFNTAGSDILRVYDGSD
                     ESADLLGEFSGNSLPSDITSSGNQLYFTFSSTGTGEGFKAEYTSQLPVWCTSQVFSDP
                     FGTISDGSLNFYYDNATSCVYNLSHPEAVRYSLDFTAMATEEGNDKIRVYNGATGSQI
                     GEYSGHTLPDPIVVETNAVLLMWSTNSTVRDEGWSIDYSIDGVGFEETTVENLSIYPN
                     PTTGMLNIKFNAEKQGNIQVKLISVSGQVIFNEEMNAVSDQYNNSFDISGYSKGIYLL
                     SIISDNAKIDRKIVLK"
     gene            complement(1514..1969)
                     /locus_tag="QF480_09685"
     CDS             complement(1514..1969)
                     /locus_tag="QF480_09685"
                     /inference="COORDINATES: protein motif:HMM:NF024170.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HJN06874.1"
                     /translation="MGKSDERNIEASSYANQFRLVIPDEATSLRLLSDIKWKDGFVCS
                     KCGSINFCKGKSELSRRCTRCKKEESVTAHTIFHRCKIPLNKAMEIAYLVCNVAAISS
                     YEISRQLDMRHMTCYGFQKKVIACRNGKNDDKLLKSVLSSVRERIDSYS"
     gene            2106..2624
                     /locus_tag="QF480_09690"
     CDS             2106..2624
                     /locus_tag="QF480_09690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006800613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HJN06875.1"
                     /translation="MRKLSVITILLISFGLMSCGNIQGNQQVDKPAIENEGDATETNT
                     SDEVTPEYLTYETFKEKVWDFEKNSTEWVYKGEVPCVIDFYADWCRPCRMVAPIMDEL
                     AIKYEGKVKIYKIDTEKEKKLAGVFGIRSIPAVLLSPMEGDPMMQTGALPKADYIRMI
                     EKELLNKKNNKL"
     gene            2638..2982
                     /locus_tag="QF480_09695"
     CDS             2638..2982
                     /locus_tag="QF480_09695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005643748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HJN06876.1"
                     /translation="MEHLTKKTFHEKVFNYEQNKDWKFEGELPCIIDFYADWCQPCKI
                     VAPILEELSTEYKGKVNTEEETELAAAFGIRSIPSILFCPAEGQPQMSQGALPKETLI
                     QAINDVLLNEKN"
BASE COUNT         1048 a          510 c          575 g          980 t
ORIGIN      
        1 tggaattgca tgacagatgt tatcaataac aattatatat gggaaattgc agaaattggt
       61 ttccacgcag gtgttggagt tgagatgatg tacggaggag atggttctgg agcctatagc
      121 aatgatgttc cttatgccct tattcactat tttaattatc aatcaagtgt acagtactta
      181 acaaaaaata gttatccaaa tagtacttgg gaaaacatga tgcagacaga actggacaac
      241 ctcagaccaa tgtattattc aggccaatca actagcggtg gacatgcatt tgtttgcgat
      301 ggttatcagg gaatgaatta ctatcatttt aattttggat ggagtggctc aggtaatgga
      361 tactactctt tacaaaacgt aaatggtttt aacacatatc agggaatggt aagaaatatt
      421 tatccttccg atccggcata tccttatatt gctgctggac aaactgatct tattacattt
      481 gttggttcat ttactgatgg tagtgggcca attgaagatt acccaaccgg gatggatgct
      541 tcttggttaa tctctcccca aaatgaaaca gattcagtca caagtgttac tatttcattt
      601 atcgaattta atactgccgg tagtgacata ttacgtgttt atgatggtag cgatgagagt
      661 gctgatttat tgggtgagtt ttccggtaac agtctgccgt ctgacattac ttcaagtggt
      721 aaccaattgt attttacatt tagctctact ggtacaggtg aaggctttaa ggcagagtat
      781 acttctcaac ttccagtatg gtgcacttca caagtattta gtgacccatt cggtacaata
      841 agcgatggta gtttgaactt ttattacgat aatgcaacaa gttgcgtcta caacctaagc
      901 catcctgaag ctgtaaggta cagtcttgat tttactgcca tggccacaga agaaggaaat
      961 gataagatta gggtttataa tggtgctact ggatcacaaa taggagaata ctcaggccat
     1021 acgctacctg atccaattgt tgttgaaacc aatgctgtgt tactaatgtg gagtacaaac
     1081 tcaactgtga gagacgaagg ttggtcaatt gattatagta ttgatggtgt tggctttgaa
     1141 gaaaccaccg ttgaaaacct ttctatctat cctaacccta caaccggtat gcttaacata
     1201 aaatttaatg ctgagaaaca gggcaatatt caagtaaaac ttataagtgt tagcggacag
     1261 gttatattta acgaagaaat gaatgcggtt tcagaccagt acaacaatag ctttgatatt
     1321 agcggttatt caaaaggtat ttatctgttg agtataatta gcgataatgc aaaaattgac
     1381 agaaagatag tattgaaata agttaatctt aactttaaaa aatagttaaa ggaggcactt
     1441 cagaaaggtt gtgcctcttt tttttcgatt aggctaatac gatgtagata ctgttcaact
     1501 cacaaggcat acatcacgag taactatcaa tcctctcccg aacacttgac agtacactct
     1561 tcaagagttt gtcgtcattc tttccattgc gacatgcaat tacttttttt tgaaacccat
     1621 agcaagtcat gtgacgcatg tctaactgtc ggctaatttc atatgacgaa atggcagcga
     1681 cattacacac aagatatgca atctccatag ccttgtttaa agggatctta catctgtgaa
     1741 agatagtatg tgcagtaact gactcttcct ttttacaacg tgtacaacgc cttgaaagtt
     1801 cactctttcc tttgcaaaaa ttaatactac cgcatttgga gcatacaaac ccatctttcc
     1861 actttatgtc agaaagtagt ctcaaacttg ttgcctcatc tggtataacc aacctaaatt
     1921 gattagcata tgatgatgcc tctatatttc gttcatcact ttttcccatt tatctcaata
     1981 aaaactgtca attataagat ttggaataat tattgtcaac aaagataaca aagtgatact
     2041 aatgtgctat ataaatttat tatctttgcc ccgttttaat gagaataaac tataaaatat
     2101 tatatatgag gaaattaagt gtaattacaa ttttgcttat ttcatttggg cttatgagct
     2161 gtggaaatat tcagggtaat cagcaagttg acaaacctgc aattgaaaat gaaggagatg
     2221 caactgaaac taatacttca gatgaagtaa ctcccgaata tttaacatat gaaacattta
     2281 aagaaaaagt ttgggatttc gaaaaaaact caactgaatg ggtttataaa ggcgaagtac
     2341 catgtgtaat cgatttttat gctgattggt gtagaccatg cagaatggtt gctccaatta
     2401 tggatgaact tgcaataaaa tatgaaggaa aagttaagat ttacaaaatc gatacagaaa
     2461 aagaaaaaaa attagccggg gtatttggta tcagaagtat acctgctgta ttgttatctc
     2521 caatggaagg ggatccaatg atgcaaactg gtgctttacc aaaagccgat tatatcagaa
     2581 tgattgaaaa agaactatta aataaaaaga ataataaatt ataacagaat tattaaaatg
     2641 gaacatttaa ctaaaaagac cttccacgaa aaagttttta attacgaaca aaataaagat
     2701 tggaaatttg aaggtgaact accttgtatc attgattttt atgctgactg gtgtcaacca
     2761 tgtaaaattg tagctccaat tcttgaggaa ctatcaacag aatacaaagg caaagtaaat
     2821 actgaagaag agaccgaatt agctgctgct tttggaatcc gtagtattcc atctatatta
     2881 ttttgccctg ctgagggaca acctcaaatg tctcagggtg cacttccaaa agaaacctta
     2941 atacaagcta ttaacgatgt actcttaaat gagaaaaact aatcttaaat ttcaagattt
     3001 gcaaacaggt ttttattcta aaagcctgtt ttttttgtat tatttttgat gattaaatct
     3061 gaaaatagat tcatgcaacc tgattctgta atacttatgt caactgcata ttt
//
LOCUS       DASCQP010000567         1909 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002043859, whole genome shotgun sequence.
ACCESSION   DASCQP010000567 DASCQP010000000
VERSION     DASCQP010000567.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1909)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1909)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1909
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002043859"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..355
                     /locus_tag="QF480_09700"
     CDS             <1..355
                     /locus_tag="QF480_09700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06877.1"
                     /translation="IQSIFSDPILIIKTSLLFILMGLLSYVHFALQPKIDDFFKDVKP
                     DTKVPDNFLAPVKPYRVLRKRLATFCLFLVLTTIILGMQVFGVFPLWLNIILIGLAAL
                     FAWRVNKTLILFGWI"
     gene            381..821
                     /locus_tag="QF480_09705"
     CDS             381..821
                     /locus_tag="QF480_09705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06878.1"
                     /translation="MEKYLLLAIFGIAMAHFEGVVVVYLRKALGIDDAQTNKDLLKEL
                     PKRYITIEKTREAATIVMLVALALLVGSTWLDMIIVFLWTFAFWDLFYYLSLYLIIRW
                     PPKFTTIDILFLIPRPWIAPVWFPISVSSITILIILGLLLTSVV"
     gene            1168..>1909
                     /locus_tag="QF480_09710"
     CDS             1168..>1909
                     /locus_tag="QF480_09710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06879.1"
                     /translation="MKQLKSTKPIHYFTIAYAVLYILFIISGSFNGAYPDLNSEGIFV
                     YLLFILFLVGFAISWSNKILTGVIFLIWYGGMLILELLVVEKDGGFGIISGIPLLILG
                     IFFIINGFKSKKEINMKKTAILFSISIISIIIIISSCKNNDDPDPTEKKKYAWVTGDT
                     ASTGYGTILFTPDAGDTWERQGDDLDALQGINVSDIWAVDENNVWACGSGNSILRTVD
                     AGLLWTRVQAPANLPDADLSSIDRKSTRL"
BASE COUNT          587 a          311 c          337 g          674 t
ORIGIN      
        1 catacagtca atattttcag atccaatact tataattaag acttcactac tctttattct
       61 tatgggatta ctttcttatg tccattttgc attacaacca aaaatcgatg atttctttaa
      121 agatgttaag cccgatacaa aggtgcctga taatttttta gcaccggtta aaccatatcg
      181 ggttcttcgt aaacgacttg ctacattctg cttatttctg gttctaacaa caattatcct
      241 tggcatgcag gtatttggtg tatttccact ttggttaaat attatactaa ttggactggc
      301 tgcgcttttt gcgtggagag taaataagac gttgatatta ttcggttgga tataagaagt
      361 gtagttacaa atatactatt atggaaaaat atttgttatt agccattttt ggcattgcca
      421 tggcccattt cgagggggta gtggtagttt accttcgtaa ggcacttggg attgatgacg
      481 cacaaacaaa taaggatctg ctcaaagaac tacccaaacg ctacataaca attgagaaaa
      541 caagagaggc agccacaata gtgatgcttg tggccctggc tcttttggtt ggaagcacat
      601 ggctcgatat gattattgtc tttctttgga catttgcctt ttgggatctg ttctattatc
      661 tctcacttta cctaataatc cgttggccac ctaagtttac cacaattgat attctttttc
      721 ttatacctcg tccctggata gcgcctgtat ggtttccaat tagcgtatca tcaattacta
      781 ttctaattat tcttggtctt cttttgactt ctgtagtata ggtttattga gacagtagag
      841 atactaaatt tctattgtaa tgcatttttt tgcattatta attatatatt caattaacca
      901 catattttga cgctcagcta aaattagtaa gattaataaa agtattctga cattaattat
      961 gatgtatgtt gccctccttt ttgtttggaa aattttactg ttagttaaat taatttacta
     1021 gttttggata aaatgcaata taattacatt aatttattgc cttcaatagt tcataatttc
     1081 ctgaataaag caaaagacaa acttcacttt tagtaactaa atatacttat tagaattttt
     1141 ttaatttatt aactaaacta taataatatg aaacaactaa aatctactaa accaattcat
     1201 tactttacta ttgcttacgc tgtgttgtac attctattta ttattagcgg tagttttaac
     1261 ggagcttatc ctgatttaaa ctcagaaggt atttttgttt atttactatt tattctgttc
     1321 cttgtaggat ttgcgatttc ctggtccaat aagatcctaa ccggagtaat attcctgatt
     1381 tggtacggag gtatgctaat cctggaatta ttagtagtcg agaaagatgg tggatttgga
     1441 attatttctg gtataccact actgattcta ggaatatttt ttattatcaa tggatttaaa
     1501 tcaaagaaag aaattaacat gaaaaaaaca gcaattttat tctcgatatc gataataagt
     1561 atcatcatca tcataagtag ttgtaaaaat aatgatgatc ccgatcctac cgaaaagaaa
     1621 aaatacgctt gggttacagg tgatacggca agtacaggtt acggcacgat tctatttaca
     1681 cccgatgccg gagacacctg ggaaagacag ggagacgatt tagatgcctt gcaggggatt
     1741 aatgtaagtg atatctgggc agtggatgaa aataatgttt gggcatgcgg aagcggtaat
     1801 tcaatcctta gaactgtaga tgcaggtcta ttatggacac gtgtacaagc acctgcaaac
     1861 ttaccagatg cagatctaag ttctatagat cggaagagca cacgtctga
//
LOCUS       DASCQP010000568        10413 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002043980, whole genome shotgun sequence.
ACCESSION   DASCQP010000568 DASCQP010000000
VERSION     DASCQP010000568.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 10413)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10413)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10413
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002043980"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            50..685
                     /locus_tag="QF480_09715"
     CDS             50..685
                     /locus_tag="QF480_09715"
                     /inference="COORDINATES: protein motif:HMM:NF013961.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HJN06880.1"
                     /translation="MNYLSSTYYFDFENEAIQDIIREFKTDNLTTKEKAILLYLKIRD
                     GWRYNPYYISFSKENYRASTISKKPDGHCIEKSILLIACLRGLNIPARIHFAKVKNHI
                     GVERIVEKFGTNEMTPHGMVNVLLEGKWLKISPAFNKELCLKCNVAPLDFDGENDSIF
                     HEFDNAGGLFMEYLEDYGHFEDVPTEFIFNTFKKNYPKIIELSKGLTEIRI"
     gene            744..1901
                     /locus_tag="QF480_09720"
     CDS             744..1901
                     /locus_tag="QF480_09720"
                     /inference="COORDINATES: protein motif:HMM:NF006569.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine aminotransferase"
                     /protein_id="HJN06881.1"
                     /translation="MDLFKGNITTKLPQTGTSIFAVMSGLANKHNAVNLSQGFPDFPI
                     SGELIKLVNHFMRKGFNQYAPMPGVEPLRKILSQMFKKNHKANYNPEKEITITAGATQ
                     AIFTAISAFVAKDDEVIIFEPAYDCYAPSVTVNGGLVKYAQLQHPDYSINWDELPRMI
                     SSRTKMIIINSPHNPTGSIISEDDMRRLETLIRNRDIIVLSDEVYEHLIFDGFQHYSA
                     ARFPELASKSIVVGSFGKTFHTTGWKMGFVLAPENIMAEYRKVHQFAVFAVNTPIQYA
                     VAEYLKNPDNYKSLSDFYQKKRDYFLSVIKKSKFKPLTNHGTYFQLLDYSKISDESEM
                     DMAVRMVKEYGIASVPVSSFYRTQENNNTLRFCFAKMESTLKNAGEILCKI"
     gene            1889..2683
                     /locus_tag="QF480_09725"
     CDS             1889..2683
                     /locus_tag="QF480_09725"
                     /inference="COORDINATES: protein motif:HMM:NF012993.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /protein_id="HJN06882.1"
                     /translation="MQDLKILAFQADLAWENPEKNRLEFEKRIDVEFDSHHLIILPET
                     FTTGFPVDPSKYAEKINGPTISWMEKMASSYNTVITGSLLLAKDGKYANTLVWMCPDG
                     TFELYEKRHVFSMGGEHEKISAGTKKLNVNLMGWTIRPMICYDLRFPVWTKNHFDEKN
                     GFEYDLAIYIANWPAVRSYPWKTLLLARSIENQAYTIGLNRVGIDGPGNKYSGDSMIV
                     DPKGMILEQGIEGQEQALSITLSHNDLEEFRNSFNVGLDWDSFTIE"
     gene            complement(2702..4522)
                     /locus_tag="QF480_09730"
     CDS             complement(2702..4522)
                     /locus_tag="QF480_09730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005634625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJN06883.1"
                     /translation="MKKFYRVLAYIKPYYGYAGLNVLFNLLTIVFSLFSFALLIPFLN
                     LLFGIDDLVTEKPDLVFNTKALLAYLNYQISDVIIASGKIQALIYICIVLMIAFFFRN
                     LSRFFAMYYMANVRVGAIKGIRNSIYTKLLILPLSFFTKHKKGDIIARVTTDVQEVEY
                     SIMNYLEMIVRDPITIIAYFAFMISMSPKLTLFVLIILPLTGFIIGRIGKSLRKQSKI
                     GMTKFAGLLSTIEESISGLRIIKAFNAIDYSDEKFRASNKDYSKLLIWIYRRRDLSSP
                     LSEFLSSVVIIIVLWFGGKMVLSDNPTIQAADFITYIVVFSQIIPPAKTFAQGFYSIQ
                     KGIASADRIFEILDAEEIIRENPDPLPVKSFKSNIEYKNVNFKYENISVLKNINLKIE
                     KGKIIALVGESGGGKSTMADLLPRFYDVDEGELLIDGKNIKDLKIDQTRKLMGIVSQE
                     SILFNDSILNNIAFGKKGVTEREVVEAAKIANAHDFIMQTENGYQTNIGDRGVKLSGG
                     QRQRISIARAVLANPPILILDEATSSLDTESEKLVQKALFNVMKDRTTVIIAHRLSTI
                     QHADEIIVLKKGEIVERGTHTELITLNGVYCRLQHLQDFA"
     gene            4674..5198
                     /locus_tag="QF480_09735"
     CDS             4674..5198
                     /locus_tag="QF480_09735"
                     /inference="COORDINATES: protein motif:HMM:NF012481.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin domain-containing protein"
                     /protein_id="HJN06884.1"
                     /translation="MKKIVLLYWGTGGNVDRTAHMVYNMFNPETIDIFDVVSFDHNTL
                     ENYELMILGHSTIGAEAWQDAKADNEWNRFFRNIESHDSCTIVAASFGLGDKMLYPDH
                     FVDGLGIYKAEMDKLNIRTIGSWPSDDYKFTDSAGEKDGFFFGLALDVDNEPKLSEER
                     IRLWPDEIKKEMGY"
     gene            5408..7153
                     /locus_tag="QF480_09740"
     CDS             5408..7153
                     /locus_tag="QF480_09740"
                     /inference="COORDINATES: protein motif:HMM:NF013618.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HJN06885.1"
                     /translation="MNLIKITIVGFAFLFASNIHSQQNQDTISTTNNKPVDVTIVDGG
                     YEKQVPNNVNIDTTGEFNLLIKDSQILITLDKLLYDKFYKKSFFTVDTSGKFNNEFRV
                     DEIPAYADSIYDQRIKALNRETPIELTYNKEVKSYINLYAVKKRELTAKMLGLSEIYF
                     PMFEEALDKYDMPLEIKYLAIVESALNPAAGSNKGAKGLWQFMYGTGKVYGLKVTSLI
                     DDRYDPYKSTIAACEHLGDLYDIYDDWSLALAAYNSGAGNVNRAIRRAGGTKNYWAVW
                     PFLPRETRGYVPAFIAVNYVMNHASEHNIYPTRPDIFYYDIDTVTVRDVLAFDQLNEM
                     LGIPMDELKFMNPQFKKGIIPASSGKEYTIRLPRNFVADYLNNEQQLYAYKTKKGVER
                     DKLLAEIKKAKDRNIHIVRSGENLGLIAKRNRVYVNQIKRWNNLRSNTIYPGQKLVLY
                     GSGSSKYYQKSSIPVARSSEKTNHIVKNGENLGLIAKKYKCTVTDLKEWNNLGSSKIF
                     PKQKLIVYKPAKKASSSFKDGKYLYHTIRKGDTLWDIAKEYDGVTVEKIKSLNNIKNS
                     RRLVPGHKIKIAIVS"
     gene            7290..8300
                     /locus_tag="QF480_09745"
     CDS             7290..8300
                     /locus_tag="QF480_09745"
                     /inference="COORDINATES: protein motif:HMM:NF027451.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4837 family protein"
                     /protein_id="HJN06886.1"
                     /translation="MKLSGLQMCFVVAMMIFTVASCDSNKNRSNLPRSIGNTSEVLVV
                     LQNEQQWDNMIGQAIKKFIGQEQYGLAQAEPIFDLAHITKNNFSDMFKKHRNILIVNI
                     NKKDTAVKVESFKDRWASPQRIIRITSNSASQFAAKFPDYAENIIRNYNMAERSRILS
                     VFRPSSKNKVLNKVRKSFNLDIIVPQGFYVAKTAAGFMWIRKEVTDFSQGIIIMSEPY
                     ADKEQFSKNSIAARTNRYLKQYIPGDSEGSYMVIDDEFISPITSPIENFISEYTVEMR
                     GVWSVEHDFMGGPFISYTFVDPRNNQILTLMGYVYHPNKKKRNLLRQLEAIIYSVKSR
                     NL"
     gene            8358..8771
                     /locus_tag="QF480_09750"
     CDS             8358..8771
                     /locus_tag="QF480_09750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06887.1"
                     /translation="MEDEKFKQDLDELFRLFKKLVETQSLDDVPGVDGMMLKQFQFFF
                     SNYENMKDQIGHQLQGQFGEPVKEMVSNLVKQLKEQLGEDEYTNIEQVTEDEPVLELD
                     SSKHSIEEIDLLLKNPDLTEEQVNELLDRRAELLQ"
     gene            8785..9396
                     /locus_tag="QF480_09755"
     CDS             8785..9396
                     /locus_tag="QF480_09755"
                     /inference="COORDINATES: protein motif:HMM:NF020123.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HJN06888.1"
                     /translation="MSRPNFKKSIKNYFTKKKWYSIVSDAVFVLLIVLLIIPSTRIEV
                     TSFFIRLTSLTPSTLNKDEQFKLNRQAETWQIIDMKGDQISFSSLNEKPVFLNFWATW
                     CPPCIAELPGIIELYEKYKNEVNFVLVSNESRAKVLDFAKTSNFNKSLFYRNTSLPSN
                     FSSQSIPTTFIISKNGYVVVSEKGAARWNSDRIEEVINKLISE"
     gene            9479..10150
                     /locus_tag="QF480_09760"
     CDS             9479..10150
                     /locus_tag="QF480_09760"
                     /inference="COORDINATES: protein motif:HMM:NF024957.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HJN06889.1"
                     /translation="MKHLKILFSILLVFLFIGTSFSQVISESARRKITVGADFFTDIW
                     QGKPSDMRLRTINQGFNIFAMYNLQLAETNSSFSFGLGVDNHNLYSNTRIENIHGDTI
                     KFIPITDVYQRSKINLTYLSVPLEFKIRLKSEIKFSVGFKIRYLISSKDKYIGDVPGE
                     PKGKTNVKRKKISRTEDYAYGFTLRFGYKSFNLFGYYQLSNIFKKGKGPQMYPISVGL
                     TITPF"
BASE COUNT         3602 a         1723 c         1845 g         3243 t
ORIGIN      
        1 acaaattatt tcaattcgtt taaccatgaa aattaacgtt aaaaattaaa tgaactattt
       61 atcttctaca tattactttg actttgaaaa tgaagcgata caggatatca ttcgtgaatt
      121 taaaacagac aatctgacca caaaagaaaa agcaatatta ttatatctta aaattcgtga
      181 cggatggaga tacaaccctt attacataag cttttctaaa gaaaactata gggcaagcac
      241 tataagtaaa aaaccggatg gccattgtat tgagaagtct attttgttaa ttgcctgcct
      301 ccgcggatta aatattccgg ccaggattca ctttgcgaaa gtaaaaaatc atataggagt
      361 cgagagaatc gtagaaaagt tcgggaccaa tgaaatgact cctcacggaa tggtaaatgt
      421 actcctggag ggaaaatggt taaaaatatc ccccgctttt aataaagaat tatgccttaa
      481 gtgtaatgtc gcacctctgg attttgacgg tgaaaatgat tctatatttc acgagttcga
      541 caatgccggt ggtttgttta tggaatatct tgaagattat ggacattttg aagatgttcc
      601 aacagaattt atttttaata cttttaagaa aaattatcca aaaattatcg aactgtcgaa
      661 aggcctaact gaaattagga tataatcaaa gcctaatctt tcaccaacaa ataactatct
      721 ttgttatcca aacagttacc ttaatggact tatttaaagg caatattacc accaaattac
      781 ctcaaacagg cacatcaatt tttgcagtaa tgtcaggatt ggctaacaaa cacaatgcgg
      841 ttaatcttag tcaggggttt cctgactttc caatatccgg ggaacttatt aaactggtca
      901 atcactttat gagaaaagga tttaaccagt acgcccccat gcctggagtg gaacctttgc
      961 gaaaaatatt gtcacaaatg tttaaaaaga accacaaggc aaactataat cctgagaaag
     1021 aaataaccat tacggcagga gctacacaag caatcttcac tgcaatttct gcctttgttg
     1081 ccaaagacga tgaggttatt atttttgaac ctgcatatga ttgttatgcg ccatctgtta
     1141 ccgttaacgg tggactagtt aaatatgccc aattacaaca tcctgattat agtattaact
     1201 gggatgagct tccgcggatg atttcgagca gaacaaaaat gattattatt aattcacctc
     1261 ataatcctac cggtagtatt ataagtgaag atgatatgcg cagactcgaa acccttatcc
     1321 gtaaccgaga cattattgtc ctaagtgatg aggtttatga gcatttaatc tttgatggat
     1381 ttcaacacta tagtgcagct cgatttcctg aattagcatc aaaatcaatt gttgttggct
     1441 catttggaaa aacttttcat acaacaggat ggaaaatggg ttttgttctt gctcctgaaa
     1501 acataatggc agaatacagg aaagtccatc agtttgccgt ttttgctgtg aatacaccaa
     1561 ttcaatatgc agttgccgaa tacttaaaga atcctgataa ttacaaatct cttagtgact
     1621 tttatcagaa aaagcgagat tattttctgt cagtaattaa aaaatcaaaa tttaaaccac
     1681 ttacaaatca tggcacatat tttcaattac tagattacag taagatttct gatgagtcgg
     1741 aaatggatat ggctgtcagg atggttaaag aatatggaat agcgtctgtc cctgtatcgt
     1801 cattttacag aacgcaggaa aacaataata cattaagatt ttgttttgct aaaatggaat
     1861 caacactaaa aaacgccggg gaaatattat gcaagattta aaaatacttg cctttcaggc
     1921 agatctggca tgggagaacc ctgaaaaaaa tcggcttgaa tttgagaaga gaattgatgt
     1981 agagtttgat tcacaccacc taataatatt accagaaaca ttcacaaccg gttttccagt
     2041 agatccaagt aagtatgcgg agaaaattaa tggcccaact attagttgga tggaaaaaat
     2101 ggcttcatca tataacacag taataactgg ttctttgttg ttagcaaagg atggaaaata
     2161 tgcaaacact cttgtttgga tgtgtcctga cggcactttt gaactttatg aaaagcgtca
     2221 tgttttttca atgggtggtg aacatgaaaa aatatctgcc ggtacaaaaa aactgaacgt
     2281 taatttaatg ggatggacaa tacggcccat gatctgttat gatttacggt tccctgtatg
     2341 gactaaaaac cattttgatg aaaagaacgg tttcgaatat gatcttgcaa tatatattgc
     2401 aaactggcca gcagtacgga gctacccgtg gaaaacatta ctcttagctc gttcaattga
     2461 aaatcaggct tatacaattg gattgaatcg tgttgggata gatggccccg gcaacaagta
     2521 tagcggagat tcaatgatag tggatcctaa aggtatgata ctagaacagg gaattgaagg
     2581 acaggaacag gcattatcga ttacactttc gcataacgat ctcgaggaat ttagaaatag
     2641 ctttaatgtt ggcctcgatt gggatagttt tacaattgaa taatcttatt acttgaggtt
     2701 cttaggcaaa gtcttgtaaa tgttgcaatc tacaatatac tccgtttaac gtaataagtt
     2761 ctgtatgagt acctctttcc actatctcac ctttttttaa tacaattatt tcatcggcat
     2821 gttgtattgt tgaaagccgg tgagcaatta ttaccgtagt acggtccttc ataacattga
     2881 acagcgcctt ctgaacaagc ttttccgatt cagtatctaa tgatgaggtt gcttcatcaa
     2941 ggatcagtat tggcgggttg gcaagaactg cccttgcaat actgatacgt tgtcgttgac
     3001 ctccggaaag ttttactcct ctatcgccaa tatttgtttg ataaccattt tcagtttgca
     3061 taatgaagtc atgcgcattt gcaatttttg ccgcttctac aacttctctc tcagtcacgc
     3121 cctttttacc aaacgcaata ttatttaata tactgtcatt aaataggata ctctcctgag
     3181 aaacaatacc cataagcttt cttgtctgat caatttttaa atctttgatg ttttttccat
     3241 caatcaataa ttcaccttca tcaacatcat aaaatcttgg cagcaggtcg gccatagttg
     3301 atttacctcc tcctgattca ccaacaagag ctattatctt tcctttttct atttttagat
     3361 ttatattttt aaggacagaa atgttttcgt atttaaagtt aacatttttg tattcaatat
     3421 tgcttttgaa tgatttgaca ggtaaaggat caggattctc tctaataatt tcctctgcat
     3481 caagaatctc aaaaattcta tcagccgatg caattccttt ctggatggag taaaatccct
     3541 gtgcaaaggt tttggcaggt ggtattattt gagaaaacac aacaatgtag gtaataaaat
     3601 cagcggcctg gattgttgga ttatcagata gtaccatctt acctccaaac cacagaacaa
     3661 ttataattac tactgatgaa agaaattcgc taagtggtga tgataaatca cgacggcgat
     3721 aaatccaaat caacaacttt gagtaatctt tgtttgatgc cctgaatttt tcatctgaat
     3781 aatcaatagc gttaaaagct ttaattatcc tcaagcctga tattgattct tcaatggtag
     3841 aaagcagtcc tgcaaatttc gtcattccaa tttttgattg tttacgcaag cttttgccaa
     3901 ttctcccaat aataaaccct gtaagaggaa gtataataag cacaaacaag gttaactttg
     3961 gactcatact tatcataaaa gcgaagtatg ctattatcgt tatcgggtct cgaactatca
     4021 tctccagata gttcataatc gaatactcaa cttcctgaac atcagtagta actctggcaa
     4081 taatatcacc ctttttgtgc tttgtgaaaa atgaaagtgg aaggataaga agtttcgtgt
     4141 aaatactatt tctaatccct tttatagcgc caacacgaac gtttgccata taatacatag
     4201 caaaaaaacg tgaaaggttt cgaaaaaaga aagcaatcat cagtacaata caaatataaa
     4261 taagggcctg aattttgcca cttgcaatta ttacatcgct tatctggtaa ttcaaataag
     4321 ctagtaatgc ttttgtgtta aatacaagat cgggtttttc agttacaagg tcatcaatac
     4381 caaataacag gtttagaaag ggtataagta aggcgaatga aaaaagtgaa aaaacaatag
     4441 tgagtaaatt aaatagtaca tttaatccgg cgtaaccata ataaggttta atatatgcca
     4501 gtactctgta aaatttcttc attgtttata tgcaaatttt aaaatgctga tgcaaatata
     4561 cacagactgt actaataata taatccatac agatttgcta ttattacaat tccattttca
     4621 tataaagctt catcaattaa ttgtactttt acaaattcaa aatcctttaa acaatgaaaa
     4681 aaatagtgct gctatattgg ggtacgggcg ggaatgttga cagaactgcc cacatggttt
     4741 ataatatgtt taaccctgaa acaatagata tatttgatgt ggttagtttt gatcataata
     4801 ccctcgaaaa ttatgaattg atgatacttg gtcattcaac tataggggca gaagcatggc
     4861 aggatgcgaa agcagacaat gaatggaaca ggtttttccg aaacattgaa agccacgaca
     4921 gttgtactat agttgctgct tcatttggtc taggtgataa gatgctttat cccgaccatt
     4981 ttgttgacgg attaggcatt tataaggctg aaatggacaa acttaatatt cgtacaattg
     5041 gcagttggcc atcagatgat tataaattta ccgattcagc cggcgaaaaa gatggtttct
     5101 ttttcggact tgcacttgat gtagacaacg aaccgaaact ttcagaagag agaatcaggt
     5161 tgtggcctga tgaaattaaa aaagaaatgg ggtactaaat gtaacctgta tcatttttaa
     5221 cccttttgtt gcagcacaat cagggctctt ccattctatg cagacagtat ctgtaaataa
     5281 cttttcatta ttcaagtcaa acatataact ttgcaaacta ttgcattgaa aaattgattg
     5341 ccttatcaag ggtgaagcaa tatgaaacaa ataatatcta ccaagacaga taaaatttat
     5401 taaacatatg aatttaatta aaattactat agttgggttt gcatttcttt tcgcatcaaa
     5461 tatacattct caacaaaatc aggatacaat ttctactacc aataataaac cagtagatgt
     5521 tactattgtg gatggtgggt atgaaaaaca agtcccaaat aatgttaata ttgatactac
     5581 tggtgagttt aatttgttga tcaaagattc tcaaatactc attacgttgg acaaactact
     5641 ttacgataag ttctacaaaa aaagcttctt cactgttgat acatccggaa aattcaacaa
     5701 tgaatttcgt gtagatgaaa tacctgctta tgcagattca atttatgacc agagaattaa
     5761 agcgttaaac cgcgaaactc ccatagaact tacttacaat aaagaagtaa aaagttatat
     5821 caacctttat gctgtaaaaa agagggagct aacggctaaa atgcttggcc taagcgaaat
     5881 atattttcca atgtttgaag aggcgttaga caaatatgat atgcctctgg aaataaaata
     5941 tcttgctatt gttgagtcgg cattaaaccc tgctgcagga tcgaacaagg gtgccaaagg
     6001 attatggcag tttatgtatg gcacgggaaa ggtttacggg cttaaagtaa cctctctcat
     6061 tgatgacagg tacgatcctt acaaatcaac tattgctgcc tgtgaacatt tgggtgattt
     6121 atatgatatt tatgatgatt ggtcgttagc acttgcagca tataattcgg gtgctggaaa
     6181 tgtaaacaga gccattcgtc gtgctggtgg aactaaaaac tattgggctg tatggccttt
     6241 tttaccacgt gaaacacgag gctatgttcc tgcatttatt gcagttaact acgttatgaa
     6301 ccatgcttct gaacacaata tctatccaac acgaccagac attttttatt atgatatcga
     6361 tacagtaact gttagagatg tgctggcatt tgatcagctt aacgaaatgc ttggtattcc
     6421 aatggatgag ttgaagttta tgaatcctca gtttaaaaaa ggaattattc ctgcatcttc
     6481 aggaaaagag tatacaatca gattacctcg taattttgtg gctgattatc taaataacga
     6541 gcaacaactt tatgcatata aaacgaagaa aggtgttgag cgtgataagc tacttgcaga
     6601 aattaaaaag gcaaaagacc gcaatattca cattgttaga agcggtgaaa accttgggct
     6661 tattgccaaa agaaaccgtg tttatgtaaa tcagatcaaa cggtggaata atctgagaag
     6721 taacacaatc tatccaggtc aaaagttagt actttatggt tcaggtagta gtaagtatta
     6781 tcaaaaatct tcaattccgg tagctcgatc ttccgaaaaa acaaaccata ttgttaaaaa
     6841 tggagagaac ttaggtttaa ttgcaaaaaa gtacaagtgt acagtaacag atcttaagga
     6901 atggaataat ttgggtagtt caaaaatatt ccccaagcaa aaacttattg tttacaaacc
     6961 agctaaaaaa gctagcagct cctttaaaga tggaaaatat ctatatcata ccatacgtaa
     7021 gggagataca ttatgggata tcgccaaaga atatgatggg gttacagttg aaaagattaa
     7081 atctctcaac aatattaaaa atagtcgtcg actggtacct ggccacaaaa ttaaaattgc
     7141 gattgtaagt tagctacaat aatccatcac ttaaatagtt ataatactag tattttcaaa
     7201 cgaaatatca attggataac gagcaggcta tgagccgtta acagtgataa ccagtttaaa
     7261 atattactaa ataatatcga agaaagaaaa tgaaattatc cggattacaa atgtgttttg
     7321 ttgttgccat gatgatattt actgtagcat cgtgtgatag caataagaat cgatcaaatt
     7381 taccacgctc cattggaaac acttctgagg tgttagtagt attacaaaac gagcaacaat
     7441 gggataatat gatagggcaa gctattaaaa aattcattgg gcaggaacag tatggcttag
     7501 ctcaggctga gcctattttt gatttggctc atataacgaa aaacaacttt tcggatatgt
     7561 ttaaaaagca tagaaatatt ctgatagtta atattaataa aaaagatact gccgtaaagg
     7621 ttgagtcatt taaagataga tgggcaagcc ctcaaaggat aattaggata acatctaact
     7681 ctgcttcgca atttgcagcc aaatttcccg actatgctga aaacattatt agaaattata
     7741 atatggctga aagaagcagg attctttcag tattcagacc cagttcaaaa aacaaagtgc
     7801 ttaataaagt tcgaaaatct tttaatctgg acattatagt tccacaggga ttttatgttg
     7861 caaaaacagc cgccggattt atgtggataa gaaaagaagt tacagacttt agccagggaa
     7921 taataattat gtcagaacct tatgctgaca aagaacagtt ttcgaaaaac agcattgctg
     7981 cacgaacaaa ccgttactta aagcaatata taccaggcga ctcagaagga tcttacatgg
     8041 ttattgatga tgagtttatt tcaccgatta cttcaccaat tgaaaatttt atatcagaat
     8101 acactgttga aatgagaggg gtttggagtg ttgaacacga ttttatgggt ggacctttta
     8161 tcagctatac ttttgttgat ccacgaaata atcaaatttt aaccttaatg ggttatgtgt
     8221 atcatcctaa caagaaaaaa cgtaatctgc tccgccaact tgaagcaatt atttattccg
     8281 taaaatctag gaatttgtaa ttatttaaca ttctcattat aaagcagaaa gcttttatta
     8341 ttaattttgc cgctacgatg gaagatgaaa aattcaaaca agatctggac gaactgttca
     8401 gactgtttaa aaagcttgtt gaaacacaat cgttagatga tgttcccggt gtggatggta
     8461 tgatgctgaa acagtttcag ttctttttta gtaattatga aaacatgaaa gaccaaattg
     8521 gacatcagct ccaaggtcaa tttggagagc ctgttaaaga aatggttagc aatttggtta
     8581 agcagcttaa agaacaatta ggtgaagatg agtatactaa tattgaacaa gtaactgaag
     8641 atgaacctgt actggaactg gatagttcta aacattcgat tgaagaaatt gatcttttgc
     8701 ttaaaaatcc cgacctgact gaggaacagg ttaatgaact gcttgatcgc agagcagaat
     8761 tattacaata ataaattacc cactttgtca aggcctaatt tcaagaaatc cattaaaaat
     8821 tactttacaa aaaagaaatg gtacagtatc gtttctgatg ctgtttttgt attgctgata
     8881 gtcttactaa ttattccctc aacaagaata gaagtaactt cattttttat cagactaaca
     8941 tctctaacac catccacttt aaacaaggat gagcagttta agttaaatcg gcaggctgaa
     9001 acgtggcaaa ttattgacat gaaaggtgat cagatttcat tttcatccct aaatgaaaag
     9061 ccggtgttct tgaatttttg ggcaacatgg tgtcctcctt gcattgccga actgccagga
     9121 attattgaac tatatgaaaa atacaaaaat gaagttaact ttgttttggt aagcaacgaa
     9181 agtcgagcta aggtgcttga ttttgccaaa acaagcaact ttaacaaatc tcttttttat
     9241 cgaaacacat ctttgccttc taatttcagt agtcagagca taccaacaac atttattata
     9301 agtaaaaacg gttatgttgt agtaagcgaa aaaggcgcag ctcgatggaa ttctgaccga
     9361 attgaggaag taattaataa attaatttct gaatgaagca agtatgttag taacgtctat
     9421 tatgtaaatc tttgacttta taaacaagct tatttagtat atttgtaaaa aattaacgat
     9481 gaagcatcta aaaattttat tctcaatttt acttgttttc ctttttattg gaacttcatt
     9541 ctcacaagta ataagtgaaa gtgcaagaag aaaaattact gttggcgctg acttctttac
     9601 tgatatctgg caaggcaaac cttccgacat gagattgcga actataaatc aaggttttaa
     9661 catttttgct atgtataatc ttcagttagc agaaacaaat tcgtcatttt cttttggtct
     9721 aggcgttgat aatcataatt tgtacagcaa tacgaggata gagaatattc atggagatac
     9781 cattaaattt attcccatca cagatgtata tcaaagaagc aaaatcaact taacatactt
     9841 atctgttcct ttggaattta aaataaggtt aaagagcgaa ataaaattta gtgttggatt
     9901 taaaattcga tatttaatta gcagcaaaga caaatatatt ggggatgttc ctggtgaacc
     9961 aaaaggaaaa acaaatgtca aacgtaaaaa aatttcccga actgaagatt atgcttatgg
    10021 atttactttg cgttttggat ataaatcctt caacttattt ggctattatc aattatccaa
    10081 catatttaaa aaaggcaaag gcccccaaat gtatcctatt tctgtaggtt taactatcac
    10141 tcctttttaa gaattccaga ctttctcaac atttttataa taagtccatt caggatgggt
    10201 ttactatttg atatgacagt tatatggata accgaaaaac ccagaataat taatcgtgtt
    10261 tagatacttt tattatatcc tgttttattt tgttgttagc attccggcat ttggccaggt
    10321 aacaagcagc cctattattt ggcaaaatgc aaataacaaa agtgcaacta taaaacttga
    10381 taacgacact tactatttaa ccgattatta tta
//
LOCUS       DASCQP010000569         2232 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002047369, whole genome shotgun sequence.
ACCESSION   DASCQP010000569 DASCQP010000000
VERSION     DASCQP010000569.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2232)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2232)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2232
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002047369"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..336
                     /locus_tag="QF480_09765"
     CDS             <1..336
                     /locus_tag="QF480_09765"
                     /inference="COORDINATES: protein motif:HMM:NF024894.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4123 domain-containing protein"
                     /protein_id="HJN06890.1"
                     /translation="PLFQWMTTEAWGDSFSIFFTSKSSYDELFSHFQKFNRVFLEGDD
                     VVLFRYYDPRVLRTYLPTCNKEEIEIFFGAVRNFFAESEEPEVINVFKQDKAANEDFL
                     FVSSYKLTV"
     gene            349..690
                     /locus_tag="QF480_09770"
     CDS             349..690
                     /locus_tag="QF480_09770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06891.1"
                     /translation="MLTIRKEQTDKLGEVVERNFKINNIKHLKEKYPNETNEKDEKKM
                     MGFIQTGIKKAEKHNIIERRDISVYLEYMLAYGEDFDTDPENEWAIKVLRIVNLRGEE
                     KVNRLLIKKPL"
     gene            706..996
                     /locus_tag="QF480_09775"
     CDS             706..996
                     /locus_tag="QF480_09775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06892.1"
                     /translation="MTTNVGNPKESCPFNKVEEPEEIQDPTKHWIKFRIKDNTGTGVS
                     DVTVQITLPDNNVVEKTSDENGLIVVNNIDPGNCKIVSDLKNVKISDTVVIE"
     gene            989..>2232
                     /locus_tag="QF480_09780"
     CDS             989..>2232
                     /locus_tag="QF480_09780"
                     /inference="COORDINATES: protein motif:HMM:NF013630.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysM domain-containing protein"
                     /protein_id="HJN06893.1"
                     /translation="MNNLKLHTSYLNYYIINETMAAKYLVKVKEHKVKKGDTIDSIAK
                     ENDMTWQELAKFNWGTDIPNKINIFLRDIVGCHVLTDDLKNFRFWGDEKNLGFGTGFL
                     WVPEDLSLTFASNTKHHINVKTINSLNIEKPECIVEFRPHPEWKGEKYGFDWNRIGDT
                     DVGTAIKDYKFKDFVGKHPDNDYNVTCVPDSTLYISLKDSEYAPNSISIPDGLKIAND
                     REECYVPWLSFYPVPSAKKLSNGEAHPLAGKIPEAELKLHIEITVPPKNLQIEFDSKF
                     FEISGDGGTVESPPKGSKDEGLGKKYYVISKKGATGLGTPRKENITIKCVKKNNKIVE
                     IDTEKLIKVMTLHKISIEDKNNTGTLIISKPNKFEDKKLVGKLKVMPNIKKNRRIKKF
                     LFVNVKTDLSVMGTNTKSGLRNV"
BASE COUNT          852 a          298 c          426 g          656 t
ORIGIN      
        1 ccgctgtttc aatggatgac caccgaagcc tggggcgata gtttttctat cttttttacc
       61 agtaaatcct cgtatgatga attgttcagc cattttcaaa aattcaatag agtgtttctt
      121 gaaggtgatg atgttgtatt attccgatat tacgacccaa gggttttacg aacttatctt
      181 ccgacttgca acaaggagga aattgagata ttttttggag cagtgaggaa cttttttgca
      241 gagagtgaag aacctgaagt tattaatgtt tttaaacaag ataaagcagc aaatgaagat
      301 tttctatttg tttcaagtta caaattaact gtataataat aatttattat gttgaccatt
      361 cgaaaagaac aaacagataa actaggagaa gttgttgaaa gaaattttaa aataaataac
      421 attaaacacc tgaaagaaaa atatcctaat gaaaccaatg agaaggatga aaaaaaaatg
      481 atgggtttta ttcaaactgg cattaaaaag gctgaaaagc ataatatcat tgaacgcaga
      541 gatatatctg tttacctgga atatatgttg gcttatggag aagattttga tactgatccg
      601 gaaaacgagt gggcaattaa ggttttacgc attgtaaatc ttaggggaga agaaaaagta
      661 aaccggcttt taataaagaa gcctttataa cctgatttta aaaatatgac aacaaatgtt
      721 ggaaatccaa aagagagctg tccttttaat aaggttgaag aaccagaaga aatacaagac
      781 cctactaaac actggataaa attcaggata aaagataata ctggtacagg tgtttcagat
      841 gttacggttc aaataacttt accagataac aacgttgttg aaaaaacttc agatgaaaat
      901 ggattgattg tagtaaataa tattgatcca ggtaattgta agattgtatc tgacttgaaa
      961 aatgtgaaaa tttctgacac agtagttatt gaataatcta aaacttcata cttcatattt
     1021 gaattattac ataataaatg aaactatggc agccaaatat cttgtaaaag ttaaagaaca
     1081 taaagtcaag aaaggtgata ctattgactc aattgctaag gagaatgata tgacctggca
     1141 ggaacttgca aagtttaact gggggactga tattcctaat aaaataaata tttttctgcg
     1201 ggatattgtc ggctgccatg tgcttaccga tgatttaaaa aattttagat tttggggaga
     1261 tgaaaaaaat cttggttttg ggacagggtt tctctgggtc cccgaagatt tgtccttaac
     1321 atttgcctca aacacaaaac atcatatcaa tgttaagaca atcaattcat taaacattga
     1381 aaagccagaa tgtatagttg aatttaggcc tcacccagaa tggaaaggag aaaagtatgg
     1441 gtttgattgg aatcgcattg gagacactga tgttggtaca gctataaagg attataaatt
     1501 caaggatttt gtaggcaaac atccggataa tgattataac gtgacttgtg ttccagattc
     1561 aactctctat attagtttaa aagattcgga gtatgctcct aacagtatca gtattccaga
     1621 tggactaaaa attgcaaacg atcgtgaaga gtgttatgtg ccatggctga gtttttatcc
     1681 cgtaccatca gcaaaaaaat taagtaatgg agaagcacat cctcttgctg gtaaaatccc
     1741 ggaagcagaa ttaaagttac atattgagat aacagtacct ccaaaaaatt tacaaataga
     1801 gtttgatagt aaattttttg aaattagtgg cgatggagga acggttgaaa gtccccctaa
     1861 gggttctaaa gatgaaggtc ttggaaagaa atattacgtt atttcaaaga aaggagctac
     1921 agggcttgga actccaagaa aagaaaatat caccattaaa tgtgtcaaaa aaaataacaa
     1981 aattgttgaa attgatactg aaaaattaat taaggttatg acgttacaca aaatatccat
     2041 tgaagataag aataatacag gcaccttaat aatatctaaa ccaaataaat ttgaggataa
     2101 aaagcttgtg ggtaaattga aagtaatgcc caatataaaa aagaatagga gaattaaaaa
     2161 gtttctattt gtaaacgtaa aaactgattt atcagtaatg ggtactaata ccaaatcagg
     2221 tttaagaaat gt
//
LOCUS       DASCQP010000570         3580 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002052821, whole genome shotgun sequence.
ACCESSION   DASCQP010000570 DASCQP010000000
VERSION     DASCQP010000570.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3580)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3580)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3580
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002052821"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..248)
                     /locus_tag="QF480_09785"
     CDS             complement(<1..248)
                     /locus_tag="QF480_09785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013612047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-eliminating lyase-related protein"
                     /protein_id="HJN06894.1"
                     /translation="MKLPKAESYRIKMVEPIHRSTREERVKWIADANYNLFNLKSNQV
                     FIDLLTDSGTGAMSDKQWSEMLLGDESYSGSSSYYKLK"
     gene            complement(586..906)
                     /locus_tag="QF480_09790"
     CDS             complement(586..906)
                     /locus_tag="QF480_09790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06895.1"
                     /translation="MLIVFIAVYLLITFILTVLGIEKQTEGLKVFLISLFLTPLVGLI
                     YIYSKKSKSSQISYYHCHDCDYIYPVKMKNCPICLEKGVKIKLTKYVSPYKVSEEIGN
                     LNLV"
     gene            complement(1076..1690)
                     /gene="udk"
                     /locus_tag="QF480_09795"
     CDS             complement(1076..1690)
                     /gene="udk"
                     /locus_tag="QF480_09795"
                     /EC_number="2.7.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004849 - uridine kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uridine kinase"
                     /protein_id="HJN06896.1"
                     /translation="MLIIGIAGGSGSGKTTVVNKIIQALPKDSVALLPQDAYYFDNCH
                     LSLEEKRKINFDHPNSIEFDLLVDDIAKLKSGKTINQPMYSYVTCARLKESISVAPKK
                     IVIIEGILILTNKKLRDLLDIKLFVATDSDDRLMRIIRRDVQERGRNYNDALIHYEKF
                     VKPMHLQFIEPTKLYADVIIPQGGNNKVAVDMVVSRIKMNLDIY"
     gene            complement(1779..2189)
                     /gene="mce"
                     /locus_tag="QF480_09800"
     CDS             complement(1779..2189)
                     /gene="mce"
                     /locus_tag="QF480_09800"
                     /EC_number="5.1.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019540272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA epimerase"
                     /protein_id="HJN06897.1"
                     /translation="MELSYIEHIGIAVKDLEKAIKYYEDTLGLVCYAIEEVVDQKAKT
                     AFFKIGQTKIELLESTDSEGPIGRFIEKRGEGIHHIAFAVDNLENSLKEVEDKGVRLI
                     DLKPRKGAEGLDIAFLHPKSTFGVLTEFCEQKKG"
     gene            2317..>3580
                     /locus_tag="QF480_09805"
     CDS             2317..>3580
                     /locus_tag="QF480_09805"
                     /inference="COORDINATES: protein motif:HMM:NF024907.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VCBS repeat-containing protein"
                     /protein_id="HJN06898.1"
                     /translation="MRRAVLFLIIIAGYFNLLGQRFTDIQAGLTGVSESASNWIDFDQ
                     DGAIDIFVTGDFYNKDRHGISSKLYKNLRRDRFTEVYSPVINVYRDDFDWADYNNDGI
                     DDLFIIGETASGNLISYLYSNDRTSNFRRIPISIPGYNDGSVEWGDYDRDGDADLLIT
                     GRTKNGPASNIYRNDRNNKFVKVNTRFPGIQHGVGKWADYDNDGDLDVILSGNNSSGK
                     VLTALFRNDTGKFNQVDIGFKDLKLSDIAWADYDNDGDLDFVIIGESGTGNLESRLYS
                     NEKDDVFLRAPANFATARSGSVDWGDMDHDGDVDLLLTGESSSGPVSKVYRNDRNGLF
                     TDIKAGVIALYMSDAHWGDYDNDGDLDIVISGMSNDYRFISRVYRNDPIKKVDIVTND
                     QSDDIWNNSVVVYPKQKNIYYYVFASCYC"
BASE COUNT         1164 a          567 c          615 g         1234 t
ORIGIN      
        1 tccttaagtt tgtaatatga ggatgagccg gaataactct catcaccaag cagcatttct
       61 gaccattgtt tatcactcat tgctcctgtt cctgagtcag ttaataggtc gataaatact
      121 tggttgcttt ttagattaaa taaattataa tttgcatccg caatccattt tacacgctct
      181 tcacgtgtgc tacggtggat gggttccacc atttttattc tatatgattc tgccttaggt
      241 aatttcatct tgctaaattt attcttaatt atcattcgaa acttaacata attaaattat
      301 gaaagtttca ttacttgatt tgctattact attaaaaaaa gggggtagtc aatgcaaaag
      361 attaattaac gcattgaaag gagaagctag aaagaatctc tttttttgat attcttaaat
      421 aaacaaaaac gtattatctg tactaaaaag accatctttt tcatttacgc tgcaaaatta
      481 ataaaattta caatatgtac ttcttattac atggataaac taggtcacta tgaataagga
      541 ataaatatga aaaataggtt tcggtaaaat gctttatttt atatattata ccagatttag
      601 atttccaatc tcttcagata ccttgtatgg acttacatat tttgtaagtt taattttaac
      661 acccttctcc aaacagatgg ggcaattctt cattttaaca gggtagatgt aatcacaatc
      721 atgacaatga taatagctaa tttgtgaaga ttttgacttt ttactataaa tataaatcaa
      781 tcctactaat ggtgtcaaaa acaagcttat taaaaacact tttaaacctt cagtttgttt
      841 ttcaataccc aatacagtta gaataaatgt tatgagaaga tatactgcta taaacactat
      901 tagcatggta attgctttta ttagtggaaa ccacttcgca actaaaatgc cacattactt
      961 aattagctgt aaatcaattg cttttaaaga ttagccatct ggaggattaa aattcctcgt
     1021 cgaatttgga tactcattag gcaataatct acgaatttgg tgaatttata acaggttaat
     1081 aaatatcaag attcatctta attctggaaa ctaccatatc aactgctact ttattattcc
     1141 caccctgggg aattattaca tcagcataaa gtttagtggg ctcaataaat tgaagatgca
     1201 taggctttac aaatttttca taatgaatta aggcatcatt ataattacgt ccacgttcct
     1261 gaacatctct tcgtataatc cgcatcaacc tgtcatcact atctgtggca acgaaaagtt
     1321 taatatctaa caaatcgcgt aatttcttgt ttgtaagaat taatattccc tcaataatta
     1381 caattttttt tggagcaaca gatattgact ctttcaatct agcacaagtg acgtacgagt
     1441 acattggttg attaatggtt ttgcctgatt tcagcttagc tatatcatct actagtaggt
     1501 caaactcaat tgaatttggg tgatcgaaat taatttttcg cttctcttct aagcttaaat
     1561 gacagttatc gaaataatat gcatcctgtg gtaaaagagc tacagaatct tttggtaagg
     1621 cctgtattat cttatttact acagttgttt ttccagagcc acttcctcca gctattccta
     1681 taattaacat gggtttttgg tgttcaaagt tagcagaaat taggggatca agaaattact
     1741 gcttaaaaat taagaaggaa ccagaccttg gcatcaagtt accctttctt ttgttcacaa
     1801 aattcagtta atacaccaaa agtagatttt ggatgtaaaa atgcaatatc taatccctct
     1861 gcaccctttc ttggttttaa gtcaatcagc ctaacacctt tatcttcgac ttctttaagt
     1921 gagttctcca aattatcaac agcaaaagct atgtgatgaa taccttcacc tcgtttttca
     1981 ataaaccttc caatcggtcc ttctgagtca gtggattcca gtaattcaat tttcgtttgt
     2041 cctattttaa aaaatgctgt ttttgctttt tgatcaacaa cttcttcaat agcataacaa
     2101 acaagcccta aagtatcctc ataatatttg attgcttttt ctaaatcttt aacagctatt
     2161 ccgatgtgct caatatatga tagttccata atgattatct cgtattaaga attgctacag
     2221 tttctgttta caaatttaac attatgagaa taacttttaa tattcataat atgctttgca
     2281 attttatttt gataatattg tagaaaattt aagcagatgc gacgtgctgt tttatttctt
     2341 ataataattg ctggctactt taatctactg gggcaacgtt ttactgatat tcaagcaggg
     2401 ctaactgggg ttagtgaaag tgccagcaat tggatagatt ttgatcagga cggagccatt
     2461 gatatttttg ttacaggaga tttctacaat aaagatagac atggaatatc ttcaaaactt
     2521 tacaaaaact taagaagaga taggtttacc gaagtatact cgccagtcat taatgtttac
     2581 agagacgatt ttgattgggc agattataac aatgatggaa tagatgattt attcatcatt
     2641 ggtgagacgg ctagcggaaa tcttatctct tacctttata gtaatgacag aactagcaac
     2701 tttaggcgaa ttcccatttc aataccagga tataatgatg gatcagttga gtggggcgat
     2761 tatgatagag atggtgatgc tgatctatta attactggta gaacaaaaaa tggacctgca
     2821 agcaatattt atcgtaacga ccgaaataat aaatttgtta aagttaatac cagatttccc
     2881 ggaattcaac atggtgttgg caagtgggca gattatgata acgatggtga tttagatgta
     2941 attctaagcg ggaataatag ctcgggcaag gtactaacag cgttgttccg aaacgatacg
     3001 ggcaaattta atcaagttga tattggtttt aaagatttaa aattaagtga tatcgcctgg
     3061 gctgattacg ataatgatgg ggatctcgac tttgtaatta ttggtgaatc aggaactggc
     3121 aaccttgaaa gcagattata ttctaatgaa aaagatgatg tctttttaag agcgcctgcc
     3181 aattttgcca cagcaagatc tggttcagtt gactggggtg atatggatca tgacggtgat
     3241 gttgacttgc tattaactgg ggagagctct agtggaccgg tgtcaaaagt ttaccgtaac
     3301 gatagaaatg gtttgtttac tgatataaaa gctggtgtta tcgcattgta tatgagtgat
     3361 gcacactggg gtgactatga taatgacgga gatctggata ttgttatctc aggcatgtca
     3421 aatgattaca ggtttatatc aagagtctac agaaatgatc caattaagaa agtagatata
     3481 gtaactaatg atcaaagtga tgatatttgg aataattcag ttgtggttta tccaaagcag
     3541 aagaatatat attactatgt atttgcttca tgctattgtg
//
LOCUS       DASCQP010000571         6900 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002053302, whole genome shotgun sequence.
ACCESSION   DASCQP010000571 DASCQP010000000
VERSION     DASCQP010000571.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 6900)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6900)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6900
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002053302"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1426
                     /locus_tag="QF480_09810"
     CDS             <1..1426
                     /locus_tag="QF480_09810"
                     /EC_number="3.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013927.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016811 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear amides
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="penicillin acylase family protein"
                     /protein_id="HJN06899.1"
                     /translation="LYREKQNPDNPNQIWVNDHWENYNTVINKITVKGGNDVAFEIRS
                     TRHGPILNGVYNNIAKYDEPPISMWWALNKMESAVLEGLYKINNASDMQEFEKAMEYI
                     DLIGMNMIYGDNENNIALWAAGKIPIRPEHVNSKIILDGASGNDEILGYYSFDKNPRI
                     INPEDGFITTSNDEHERVDGILYPGYYSPGIRANRIKRLINSRDKWDIEGLSSIQLDN
                     TSEKDTMLAALILSEANTKKVSSIGPTYALAINQLHSWDGKTDVNSIGATIFSNLVYF
                     IMYNTLGDELNEQDFNSFINSFLVRSRMSALFSNENSIWFDNKTTLNTKELRSDIFTL
                     SLEETISSLSAQLGDDVSTWKWGKVHTLTHIHPIGYEEPLDRIFNIGPFAKSGGNDVI
                     DKEGYRYNKAGVYPVVDGPAMRLLIDFADTDHAWSIIPTGQSGNVMSQHYSDQAHMFN
                     NGKYRIINTNKNELNNERVLILEP"
     gene            complement(1521..1874)
                     /locus_tag="QF480_09815"
     CDS             complement(1521..1874)
                     /locus_tag="QF480_09815"
                     /inference="COORDINATES: protein motif:HMM:TIGR04256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GxxExxY protein"
                     /protein_id="HJN06900.1"
                     /translation="MIKSEYKYSELTSKIIGCAMKVHSELGNGFQEVIYQRALEIEMI
                     DTGLNFSREFEMPIYYKQQQIGTRRVDFLCEEIISMELKAITNLEDVHLAQAINYLEA
                     YDLEVGFLSISEPKV"
     gene            complement(1901..2311)
                     /locus_tag="QF480_09820"
     CDS             complement(1901..2311)
                     /locus_tag="QF480_09820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06901.1"
                     /translation="MNTVSDNTDDFVKKAVKIASVEKPGDDFIPSVMNKIEGLSLKES
                     KVQSTGSIISWKGWVFIGTIVGTIFVLLFLSEPTTFNFSFFDTYVNYINSINISISVS
                     SIFLTGVLVFVFYFLLQISLIVRRVNGPEKSLNH"
     gene            complement(2298..2882)
                     /locus_tag="QF480_09825"
     CDS             complement(2298..2882)
                     /locus_tag="QF480_09825"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HJN06902.1"
                     /translation="MGSIDENILIPKILAGDVQSFEEIVKRYNMMVYTLAYRVLKNRE
                     EDEELAQDVFLKVYSSLDSFNMKSKLSTWIYRITYNASINKYKSQKRKVDTIEIDDFV
                     EFNISDLSDAQHDIHIKEKRKIINNSILKLPETDRIIITLYYYEELQIKEISEIVGLS
                     THNVKIKLHRSRQKLYVELKDKIGQKKIDYYEYS"
     gene            3019..3366
                     /locus_tag="QF480_09830"
     CDS             3019..3366
                     /locus_tag="QF480_09830"
                     /inference="COORDINATES: protein motif:HMM:NF039701.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6249 domain-containing protein"
                     /protein_id="HJN06903.1"
                     /translation="MEVAIVFISAFIVVFGILFLYYTTRHKERLALIEKDKDVSVFMS
                     NKTPSTRSAWKIISMNLALISIGVGIGILFGNFLYSIAGMQEEVAYSASIFLLAGVGL
                     LIGTLMAKKEASL"
     gene            3591..5459
                     /locus_tag="QF480_09835"
     CDS             3591..5459
                     /locus_tag="QF480_09835"
                     /inference="COORDINATES: protein motif:HMM:NF013781.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HJN06904.1"
                     /translation="MQKERLFETFPPVSTKEWKEKIKKDLKGADYDKKLVWRTDEGFR
                     VQPYYRSEDLGKFPHISIFPGNFPFVRGNHIKNNNWLVRQDILVENIENANRKALKIG
                     LAGVDSLGFYFEDDFKPDDNSVERLFKDIPLDKKEINFAANYPLEIIDIISSLASKSN
                     INPNKVKGSVEYDPISYFSLNGRFHNTAKEDLALLNKLHTSCKHIPNFQYLCINATIF
                     NNSGGGIVSELAFSMAMAAEYLTYLTDSGLDIDDIAPHIRFHYSVGSDYFMEIAKFRA
                     AKYLWANIVNAYGLKNKSNATMYIHCSNSRWNKTIYDPYVNMLRTTTESMSAIIGGVN
                     SLSVLPFNSVFETETEFSERIARNQQLVLKGESYFDKVADVGAGSYYIESLTDKLIHN
                     AWERFLNVDKEGGYIKAFKKGSIQKIIANEASIKDDDVATRKRSLLGTNQFPNTSESF
                     NSDFELLKRKTKPENDGVQPLVIYRGGEKLEEIRLSTDKFAINNKRPVAWMFTYGDLT
                     MRKTRSQFAGNFFGCAGYEIVDNPGFNNVEEGIAAAIVDKPEIVVICSSNEEYKDIVE
                     PIYNALVDKAVVVLAGYPESQIDRLKEIGLTNFVHVKSNVLEELKRYQKLLIKEEL"
     gene            5475..>6900
                     /gene="scpA"
                     /locus_tag="QF480_09840"
     CDS             5475..>6900
                     /gene="scpA"
                     /locus_tag="QF480_09840"
                     /EC_number="5.4.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005678836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004494 - methylmalonyl-CoA mutase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase"
                     /protein_id="HJN06905.1"
                     /translation="MKPDFEKINIDSFSKPKDSNADWEANNNIHPDWKTSENIDIKPV
                     YTSEELNGMEHLNYAAGLSPFLRGPYSTMYVTRPWTIRQYAVFSTAKESNAFYRRNLA
                     AGQKGLSVAFDLATHRGYDSDHERVVGDVGKAGVAIDSVLDMEILFDQIPLNSISVSM
                     TMNGAVLPILAFYIVAALEQGAKLEELTGTIQNDILKEFMVRNTYIYPPDPSMRIIAD
                     IFEYTSQKMPKFNSISISGYHIQEAGGTADIELAYTLADGLDYIRTGLKAGLKIDDFA
                     PRLSFFWGSGMNHFMEIAKLRAGRLLWAKIVKQFNPKKLKSMALRAHTQTSGWSLTEQ
                     DPFNNVARTCIEALGAVLGHTQSLHTNALDEAIALPTDFSARIARNTQIYLQEETDIC
                     RSIDPWAGSYYVETLTNELVHKAWEHIVEIEEMGGMSKAIETGLPKMRIEEAAARKQA
                     RIDANKDVIVGVNSYKLEKEDPIET"
BASE COUNT         2292 a         1102 c         1247 g         2259 t
ORIGIN      
        1 tctttataga gaaaaacaga atcctgataa tccgaatcag atttgggtaa acgatcactg
       61 ggaaaattat aatacagtta tcaataaaat tactgtgaaa ggaggaaatg atgttgcatt
      121 tgaaattcgc tctactcgcc atggacctat tttgaatggc gtttacaata atattgcgaa
      181 atacgacgaa ccacctattt caatgtggtg ggcattaaat aaaatggaat ctgctgttct
      241 tgaaggtttg tacaaaatta ataatgcttc tgatatgcag gagttcgaaa aagcaatgga
      301 gtacattgat ttaattggaa tgaacatgat ttatggtgat aatgaaaata acattgcatt
      361 atgggctgct ggtaaaatac ctatcagacc agagcatgtt aattctaaaa ttatattaga
      421 cggtgcaagt ggaaatgatg agattcttgg ctattattca tttgataaga atccgagaat
      481 cattaatccg gaagatgggt ttattacaac ctcaaacgat gaacatgaaa gggttgatgg
      541 tattttatat ccaggttatt attctccggg gatcagagca aatcgtatta agagattgat
      601 aaattctcgt gacaagtggg atatagaagg tttatcatcg attcaactcg ataatacttc
      661 agaaaaagat acaatgcttg ctgctttgat attatcggag gccaatacca aaaaggtttc
      721 aagcattggt ccaacatatg ctttagccat aaatcagtta catagctggg atggcaagac
      781 cgatgtaaat agcattggtg caaccatctt cagtaatctg gtttatttta ttatgtataa
      841 tactttaggt gatgaactta atgagcagga tttcaatagt tttataaatt catttctagt
      901 acgttccaga atgtcagcat tattttcgaa cgaaaattca atttggtttg ataacaaaac
      961 aaccttaaat acaaaggaac ttcgaagtga tatttttaca ttatcattag aggaaactat
     1021 ttcttccttg tcagcccagt taggggatga tgtgagtaca tggaagtggg gcaaggttca
     1081 tacgcttaca catatacacc ctattggtta tgaagaacca ctcgatcgaa tatttaatat
     1141 tggtccgttt gctaaatcag gtggaaatga tgtaattgat aaagaaggtt ataggtacaa
     1201 caaagcagga gtttatccgg ttgttgatgg ccctgcgatg agattactta ttgattttgc
     1261 tgatacagat catgcatggt cgattattcc aactggccag tcaggaaatg taatgagtca
     1321 acattattct gatcaggccc atatgtttaa taatggcaag taccgtatca ttaatacaaa
     1381 taaaaatgaa ctcaataatg aaagggttct gatacttgaa ccttaaggta gttcgataat
     1441 tgtcggaact atgatttatt tgatttctgg atttccctga tttttctgtt tgaatttttt
     1501 attggcaagg cgtttgaatg ttaaactttt ggttccgaaa ttgataagaa ccctacttcc
     1561 aaatcatatg cctccaaata atttattgct tgagccaaat gaacatcttc taaattagta
     1621 attgctttta attccattga tattatttct tcacatagaa aatcaaccct tcgtgtacca
     1681 atctgttgtt gcttataata aatgggcatt tcaaattctc tgctgaaatt taatcctgta
     1741 tcgatcatct caatttctaa tgcccgttga taaattactt cttgaaagcc attgcctaat
     1801 tcagaatgaa ctttcattgc acaaccaatt attttagatg tcagttctga atatttgtat
     1861 tcacttttaa tcatagccta tcaaactaat catagattaa tcagtggttc agactttttt
     1921 ctggtccgtt tactcttctt acaattaaag aaatttggag aagaaagtaa aatacaaaaa
     1981 ctaatactcc tgttaagaat atactagata cagaaataga tatgtttatt gagtttatat
     2041 aattgacata agtatcaaag aatgaaaagt taaaagtagt aggttctgaa agaaataaaa
     2101 gcacaaaaat agtaccaaca atagttccaa taaaaaccca tcctttccag gaaataattg
     2161 aacctgtact ctgaacttta ctttccttca aacttaaacc ttcaatttta ttcattaccg
     2221 aaggaataaa atcatcacca ggtttttcaa ctgaagcaat ttttactgct tttttaacaa
     2281 aatcatctgt attatcacta actgtattca tagtaatcta tttttttctg tccaatttta
     2341 tcttttagtt ctacataaag tttttgtcgg ctcctatgga gctttatttt aacattatgc
     2401 gttgatagtc ccactatttc agatatttct ttaatttgta actcttcata ataatacaaa
     2461 gttataatta tcctatcagt ttccggtagt tttaatattg aattgttaat gatttttctt
     2521 ttttctttta tgtgtatatc atgttgagca tcagataagt cagaaatatt aaattcaaca
     2581 aagtcatcaa tctcaattgt atctaccttt cttttttgag atttgtattt gttaattgat
     2641 gcattatatg ttatacggta aatccatgta gataattttg acttcatatt aaaactatcc
     2701 aatgagctat aaacttttag aaatacatcc tgtgctaatt cttcatcttc ttcacggttt
     2761 tttaataccc tgtatgccag cgtgtaaacc atcatgttat atcttttcac tatttcttca
     2821 aaagattgaa catctccagc tagaattttt ggtataagta tgttctcatc tattgatccc
     2881 attgtacttt agacagtaaa cttattaatt ggttacataa ttgttattct tttatttttt
     2941 gtaaccaaaa tacaaaacac atgtcaaaga tataaaagac taatattagt caatcatata
     3001 atcttaaaaa ttagaaaaat ggaagtagca attgtattta ttagtgcgtt tatagtggtt
     3061 ttcggaattc tttttctgta ttacaccaca agacataaag agcgtcttgc cttaattgag
     3121 aaggacaaag atgtaagtgt ttttatgagc aataaaactc cctctacacg atcggcatgg
     3181 aaaattatca gtatgaacct tgcccttatt tcaataggtg ttgggattgg aattcttttc
     3241 ggtaactttt tatatagcat tgccggtatg caagaagagg tagcatactc agcttcaata
     3301 tttctacttg caggagtagg tttgttaatt ggaacattaa tggctaagaa agaagcaagc
     3361 ttgtaaagaa tcttgagttt atcagcaatc tatcaccctg tacatttttc cagtattata
     3421 aggctgttaa cccaaatgta ctggtaacga ctaggtttga gtactggcaa acctatatac
     3481 taaacagtct catcatctta atgttatttg cttaataaca tttccttgct gcagaacatt
     3541 accactcttt ttcttttaat tttgtacttt aattacaaat cgcaattaaa atgcaaaaag
     3601 agagactttt tgaaacattt cctcctgtct caaccaaaga gtggaaagaa aaaataaaaa
     3661 aggatcttaa gggtgctgat tatgacaaaa aacttgtttg gagaaccgac gaaggattta
     3721 gggttcaacc ttactacaga agtgaagatt taggcaagtt tcctcacatc agtattttcc
     3781 caggaaattt cccatttgtc agaggaaacc acatcaaaaa taacaactgg cttgtccgtc
     3841 aggatattct agttgaaaat attgaaaatg caaaccggaa agcacttaaa attggattag
     3901 cgggtgttga ttctttgggg ttttattttg aagatgattt taaacctgat gataatagtg
     3961 ttgagagact cttcaaggat atccctctcg ataagaagga aataaacttt gcagcaaatt
     4021 acccgctcga aataattgat atcatttctt ctctagcgag caaatccaat attaatccca
     4081 ataaagttaa aggaagcgtt gaatatgatc caataagcta ttttagctta aacggtagat
     4141 ttcacaatac ggcaaaagag gaccttgcat tgttgaataa actgcatact tcatgcaagc
     4201 acataccgaa ttttcaatat ttatgtatta atgccacgat atttaataat tctggaggag
     4261 gaattgttag cgagctggct ttttctatgg caatggctgc agaatacctt acctatctta
     4321 ctgatagcgg actggatatt gacgatatag caccccatat tcgatttcat tattctgttg
     4381 gatctgatta tttcatggaa attgcaaagt ttagagcggc aaaatatctt tgggcaaata
     4441 ttgtcaatgc atatgggtta aagaataaat caaatgcaac aatgtatatt cattgtagca
     4501 attcaagatg gaataaaact atttacgatc cgtatgtaaa tatgcttcga accaccacag
     4561 aatctatgtc agccattatc ggaggagtta attcattaag tgtgttgcca tttaattctg
     4621 ttttcgaaac agaaactgag ttttctgaac gtatagcccg caatcaacaa ttggtattaa
     4681 agggagaatc atatttcgat aaagtggcag atgttggtgc aggctcctat tatattgaaa
     4741 gtcttactga taaacttatc cacaatgctt gggagcgatt ccttaacgtt gataaagaag
     4801 gtggttatat aaaggctttc aaaaaaggaa gtatccaaaa aattattgct aacgaagctt
     4861 caataaagga tgatgatgtt gcaactcgga aaaggtcgct tcttgggaca aatcaatttc
     4921 ctaatactag tgagtcgttt aattcagatt ttgaacttct aaagagaaaa accaaacctg
     4981 aaaatgatgg agtacaacca cttgtaattt atcgtggtgg tgagaaatta gaagaaatac
     5041 ggttaagtac tgataaattt gctattaaca ataaacggcc tgtagcttgg atgtttacat
     5101 atggtgatct gacaatgcgt aaaactagat cacagtttgc aggtaatttt ttcggttgtg
     5161 caggttatga aatagttgat aatcctggtt ttaataatgt tgaagaaggt atagctgcag
     5221 ccatagttga taaaccagaa attgttgtta tctgtagttc caatgaagaa tacaaagata
     5281 ttgtagaacc aatttataat gcactggttg ataaagcagt agtcgttttg gctggttatc
     5341 ccgaatcaca aattgatcga ttaaaagaga ttggattgac aaattttgta catgtaaaaa
     5401 gtaatgtgct tgaagaatta aagcggtatc agaagttatt aattaaggag gaactttgaa
     5461 aagtaaccaa tacgatgaaa cctgattttg aaaaaataaa tattgatagc ttttctaaac
     5521 ctaaagactc aaatgcagat tgggaagcta acaataatat acatcctgac tggaagactt
     5581 ctgaaaacat tgatataaaa cctgtttata catctgagga attaaatggg atggagcacc
     5641 ttaattatgc tgcaggttta tctccatttt tgagaggtcc ttattcgaca atgtatgtta
     5701 cgcgtccctg gacaataaga caatatgcag ttttttcaac cgccaaagaa tccaatgctt
     5761 tttaccgccg taatcttgct gcagggcaaa aaggattatc ggtagctttc gaccttgcaa
     5821 ctcaccgtgg ttatgattct gatcacgaac gtgttgttgg tgatgttggt aaagcgggtg
     5881 ttgctatcga ttcggttctc gatatggaaa tattgttcga tcaaataccg ttgaatagta
     5941 tatcagtttc catgacaatg aatggagctg tattaccaat actggcattt tatattgtag
     6001 cggcattgga acagggtgca aagctagaag aacttactgg aaccatccaa aatgatattc
     6061 ttaaagaatt tatggttcgc aatacctata tctatcctcc tgatccgtct atgcgcataa
     6121 ttgcggatat ttttgaatat acttcacaaa aaatgccgaa gttcaattca atttcaattt
     6181 ctggttatca tattcaggaa gcgggtggaa cggcagatat tgagcttgct tataccttgg
     6241 cagatggtct tgattatata agaacaggac ttaaagctgg attaaagatt gacgattttg
     6301 ctcctcgact ttctttcttt tggggatcag gaatgaacca ttttatggaa atcgccaaac
     6361 tccgtgccgg acgtctattg tgggctaaga ttgttaagca atttaatcct aagaaactaa
     6421 aatcaatggc attgcgtgca catactcaaa cgtcaggatg gagccttaca gaacaagatc
     6481 cctttaacaa cgtcgctcgt acttgtattg aagctcttgg tgcggtatta ggtcatacac
     6541 aatctcttca tacgaatgcc ctggatgaag caattgcact ccctaccgat ttttcagcac
     6601 gaatagcccg taatactcaa atttatctgc aagaagaaac tgatatttgt cggtcgattg
     6661 atccatgggc aggatcctat tatgttgaaa ctcttactaa cgaactcgta cacaaagcat
     6721 gggaacatat tgtggagatt gaagaaatgg gaggaatgtc gaaagccata gaaacaggat
     6781 taccaaaaat gagaatcgaa gaagctgccg cacgcaaaca ggctcgaatt gacgctaata
     6841 aagatgtgat tgttggtgta aatagttata aattggaaaa ggaagatcca atagaaacac
//
LOCUS       DASCQP010000572         2407 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002054259, whole genome shotgun sequence.
ACCESSION   DASCQP010000572 DASCQP010000000
VERSION     DASCQP010000572.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2407)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2407)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2407
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002054259"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            301..1134
                     /locus_tag="QF480_09845"
     CDS             301..1134
                     /locus_tag="QF480_09845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06906.1"
                     /translation="MKKLNLIIALLMIFGIVSLSTSCKKDEQQIADNTSASADDAFAE
                     GIYSDATNIVDEAYDNGSGGLKSGNTSNLFLSGCATVTLDTTVTPRELTIDFGEENCL
                     CLDGKKRRGKIIVTFTGRYRWPGTVITYGFDNYHVNDNHVDGTKIIRNMGLNTNNKLH
                     YNIEVVGVIYKADNGGTLSWNSSRVREWIHGAFTFPHWDDVYLITGTADGIRPNGQTW
                     EREIVSPLRVELNCKWIVSGTMEIKPEGLPLRILDFGSGECDNIATVLVNGITYTIFL
                     H"
     gene            1272..1760
                     /locus_tag="QF480_09850"
     CDS             1272..1760
                     /locus_tag="QF480_09850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009859801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HJN06907.1"
                     /translation="MTRELFKDIFDNHFDAVRNYIYYRSGDGDLATDIAQDTFMKIWE
                     KQLHFHENKNIKALIFKIANDLFISTHRRQKVIMNFHLNLKIEAARQSPEDLLQFKEL
                     KNQYESALVRLPEKQRVVFLMSRIENLKYHEIAESIGISIKAIEKRMKYALAFLKMEL
                     NY"
     gene            1762..>2407
                     /locus_tag="QF480_09855"
     CDS             1762..>2407
                     /locus_tag="QF480_09855"
                     /inference="COORDINATES: protein motif:HMM:NF016648.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR family protein"
                     /protein_id="HJN06908.1"
                     /translation="MDHKKDHNTNNENFSEKEFFSVVQPKYSKTKEDIWSEINSEIEL
                     NQNESLKLRTGTSLSTRLFYGIAASIVLLLGTVLLLRFYSNSNYCPDGEQLTVKLPDG
                     SAVTLKSNSSITYFPLWWNFSRKVNLTGEAFFDVEKGEDFIVASAYGRTVVLGTTFNV
                     YAREYAYKVTCFTGMVKVISLSQNSVVLNPNYTAEVIYNGEIKVSKYDAKNEILK"
BASE COUNT          855 a          362 c          461 g          729 t
ORIGIN      
        1 cttaatatga gagaagttag tatacttcac ggaaaaggtt acggaatttt acgtgatatt
       61 attcgtcaat atttacaaaa tctcgaagaa attaaaaatt ttggagatgc acccatcgaa
      121 atggggggaa caggaattac gagagttaat ttaaaataat gaaatggaaa ttattatcta
      181 atgtcgtttt cgtaaactaa tttgaacagt acttataaaa aaaacaatat tcgaggtagg
      241 gtaaaagtgt tttaatgcgg tattgaagtg taaaacacaa ttttaattaa aacttatatc
      301 atgaaaaaat taaatttaat tatcgcattg cttatgatct ttgggattgt ttcactttca
      361 acctcatgca aaaaagatga gcaacaaata gccgacaaca catcagcatc agctgatgat
      421 gcatttgcag aaggaattta ttccgatgcc acaaacattg ttgatgaggc atacgacaac
      481 ggaagtggtg gattaaaatc gggtaacaca tcaaacctat tccttagcgg atgtgctaca
      541 gttacccttg acacaacagt taccccccgt gaattaacta tcgactttgg tgaggaaaac
      601 tgtttgtgcc tagatggcaa aaaacgtaga ggcaagatca ttgttacatt taccggtagg
      661 tatcgttggc caggtacagt aatcacttat ggtttcgata attaccatgt aaatgacaat
      721 catgttgacg gaacaaagat tattagaaac atggggttaa acacaaacaa caaactgcac
      781 tataatattg aagttgttgg tgtaatttat aaggctgaca atggtggtac tcttagttgg
      841 aattcatcca gagttagaga gtggatacat ggagccttta cctttcctca ctgggatgat
      901 gtttatctta ttacaggtac agcagatgga attaggccaa acggacaaac ttgggaacgt
      961 gaaatagtta gtccgctacg tgttgaactt aactgcaagt ggattgtttc aggaacaatg
     1021 gagattaaac cagaagggct gcctcttaga attcttgatt tcgggtcagg tgaatgtgac
     1081 aatattgcaa cggtacttgt taatggaatt acgtacacaa tttttctaca ctaatataag
     1141 ttatttgatt agcgaaacta actttgaagt tgtcttaaaa gtagtagaac ctcttttaag
     1201 acaacctcat ttttttaatt ctaaaaagga aaatatgtag tgttcttact ctaatcacaa
     1261 aatccatttc attgacacgg gagcttttta aagatatttt tgacaatcat tttgatgctg
     1321 tacgaaacta catttattat cgatcgggtg atggtgacct tgccactgat attgctcaag
     1381 atacattcat gaaaatatgg gaaaagcaat tacattttca cgaaaacaaa aatattaaag
     1441 cattaatctt taaaattgcc aacgatttgt ttataagtac tcatagaagg caaaaagtga
     1501 taatgaactt tcatttgaat ttaaaaatag aagcagctag acaatcgcca gaagatcttt
     1561 tgcagtttaa agaacttaag aatcaatatg aatcagctct agtgagattg cccgaaaaac
     1621 agagagtagt atttttgatg agcagaattg agaatttgaa atatcatgaa attgcagaat
     1681 ctattggaat tagcataaaa gctattgaga aaaggatgaa atatgcactt gcatttttaa
     1741 aaatggagct taattactag tatggatcac aaaaaagatc ataatacaaa taatgagaat
     1801 ttctctgaaa aggaattctt ttctgtagtt caacccaagt atagtaagac taaagaagat
     1861 atttggagcg aaatcaattc agaaattgag ttgaatcaaa acgaaagctt aaaattaaga
     1921 acaggcactt cattaagcac tcgtcttttt tatggtattg cagctagtat agtgttatta
     1981 ctaggcactg tattgttgct tcgattctat agtaattcaa actattgccc tgatggagag
     2041 cagcttactg tgaaactacc agatggatcc gcagttactt taaaatcaaa ctcatctata
     2101 acatattttc cactttggtg gaatttctcc aggaaagtaa acttaacagg tgaagcattc
     2161 tttgatgttg agaaaggaga ggatttcatc gtggcttcag catacggcag aacagttgtc
     2221 ctggggacta ccttcaatgt ttatgcacga gaatatgcat acaaagtaac atgctttacc
     2281 ggtatggtta aggtaatttc actaagtcaa aattcagtag tactgaatcc taactatacc
     2341 gctgaagtta tttacaatgg agagataaag gtttcaaagt atgatgcgaa aaatgaaata
     2401 ctcaagg
//
LOCUS       DASCQP010000573         3144 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002060201, whole genome shotgun sequence.
ACCESSION   DASCQP010000573 DASCQP010000000
VERSION     DASCQP010000573.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3144)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3144)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3144
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002060201"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..588
                     /gene="secF"
                     /locus_tag="QF480_09860"
     CDS             <1..588
                     /gene="secF"
                     /locus_tag="QF480_09860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019245417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HJN06909.1"
                     /translation="TIAYDIRNKAYFAIFFALIIIFIYIAVRFKKWQFGVAGVAALFH
                     DTIITIGLFSLFYGVLPFSMEIDQAFIAAILTIIGYSINDTVIIFDRIRENTKLFPKH
                     SIKSNINIGLNSTLARTINTSGTTIVVLLVIFIFGGEVIRGFIFALLIGVMVGTYSSL
                     FTASPIAYDLLGGDKQEREVADREARLKAKKTRKK"
     gene            721..1218
                     /locus_tag="QF480_09865"
     CDS             721..1218
                     /locus_tag="QF480_09865"
                     /inference="COORDINATES: protein motif:HMM:NF020621.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA];
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA];
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Ni]"
                     /protein_id="HJN06910.1"
                     /translation="MKKTLLVLTAILFSTILTKTATAHCEVPCGIYNDELRIELIKEH
                     IQTIEKAMNQINEIQSSSSTNYNQLIRWITTKENHATLIQEIAEQYFLTQRVKFVEPS
                     DSDKYTKYINQLSYLHQLIVYSMKAKQSTDLKNITHLDEALGKFENAYFVKDAHRHNL
                     NGKHK"
     gene            1378..2670
                     /locus_tag="QF480_09870"
     CDS             1378..2670
                     /locus_tag="QF480_09870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009135888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mur ligase family protein"
                     /protein_id="HJN06911.1"
                     /translation="MDYKDTVSWLFDQLPMFQRVGKAAYKADLKNTVLLLKALGNPEK
                     QIKAIHIAGTNGKGSVAHIIASVIQEAGYSTGLYTSPHLKDFRERIKINGQLIPEENV
                     SRFVKTNKKTFVNLKSSFFEMTVGLAFKYFADEKVDFAVIETGLGGRLDSTNLCNPII
                     SIITNIGIDHTILLGDSLTKIASEKAGIIKSAIPLVVGKHQAETDKIFELACSKIKAP
                     LFFAEDDMELRVFQSDDEDIQTMDVWYKNEKIITGLKSPLLGRYQEENICTALRSIEL
                     LNENKHIDVTSSEISDGVENIISNTGFYGRWQKLSTNPLTICDTGHNIDGIKAVIKQL
                     DDLNFTHLHFVLGMVIDKDVFSILTILPNKATYYFCKPDIPRGMDQEELAQSGFKAGL
                     NGKSYNSVTQAYHSAINNAGVNDLVFIGGSTFVVSEVI"
     gene            2705..>3144
                     /locus_tag="QF480_09875"
     CDS             2705..>3144
                     /locus_tag="QF480_09875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06912.1"
                     /translation="MSLFNIIQLGLLAVLLAYFFYYVYTMLFDKSYQPLVWKAQLQKG
                     LISKELKHAEKKYSDHNRFFNFWFQVERLKNANVAGSFAELGVYKGDSARIIHLMDPS
                     RDFHLFDTFEGFQEKDLEIETGKAASYTSHNFADTSIERVQQKLT"
BASE COUNT         1107 a          491 c          558 g          988 t
ORIGIN      
        1 acaattgcct acgatatcag gaacaaagcg tactttgcaa ttttctttgc tctaattatc
       61 atctttattt acatagctgt ccgttttaaa aagtggcaat tcggtgttgc cggtgtagct
      121 gctctgtttc atgatactat aattacaata gggctattct ctctatttta tggtgttcta
      181 ccatttagca tggaaataga ccaggcattt attgcagcta tattaactat tattgggtac
      241 tcaattaatg atactgtgat tatcttcgac cgtattcgtg aaaacactaa gcttttccca
      301 aaacatagta ttaagagcaa tataaatatt ggtttgaata gtacattagc tcgtacaata
      361 aatacatcag gcacaacaat agttgtttta cttgtaatat tcatttttgg tggtgaagtt
      421 atccgtggat ttattttcgc attactcatt ggtgtaatgg ttggtactta ttcatcacta
      481 tttactgcta gtccgatagc ttatgatctt cttggcggag ataaacaaga acgagaagtt
      541 gctgatagag aagccaggct aaaggcaaaa aaaaccagga aaaaataact ctttttaaaa
      601 cttatgaaaa gtccccctgc ttttgcagag ggactttttt tttgattaac taaactgtct
      661 ctctttaaaa ttgctttatt ttgcaattta taatcattct aaataaaaca attctatatc
      721 atgaaaaaaa cattattagt attaacagca attttattct caacaatatt aactaagaca
      781 gcaacagcac attgtgaagt tccatgtggt atttacaatg acgaacttcg aattgagctt
      841 attaaagagc acatccaaac tattgaaaaa gcgatgaatc aaatcaatga gattcaaagt
      901 agtagttcaa ctaattataa tcaacttatt cgttggataa ctacaaaaga aaatcacgca
      961 acattgattc aggaaattgc agagcaatat tttctaacgc aaagagtaaa atttgtagaa
     1021 ccctctgata gcgacaagta cactaagtat ataaaccagt taagttacct tcatcagctt
     1081 atagtatatt ctatgaaggc aaaacaatca accgatctca aaaacattac tcacctggat
     1141 gaagctctag gaaagtttga aaatgcatat tttgttaaag atgcgcatcg acacaaccta
     1201 aatggaaagc ataaataatg ttaatccaag ataatagttt ttctcattag tgatgtacct
     1261 aatctgaacg ggtagtagat aatctctgaa aatcatttat tatttttata gtctaattaa
     1321 atttttcata tctttaatga aaactctgaa tagagtattt aaacgattcc ctttgctatg
     1381 gattataaag acacagtgtc ctggttattc gatcaactac ctatgtttca aagagttggt
     1441 aaagcggcat acaaggctga tttgaagaat actgtactat tgcttaaagc attaggaaat
     1501 cctgaaaaac aaattaaggc aatccacata gccgggacaa atggcaaagg aagtgttgca
     1561 cacataattg catctgttat tcaagaggca ggttacagta cagggctata tacttcacct
     1621 catcttaaag atttcagaga gagaataaaa ataaatgggc aattaatacc cgaggaaaat
     1681 gtatcgagat ttgtcaaaac gaacaagaaa acttttgtca atctaaaatc ttcctttttt
     1741 gaaatgacag taggtttagc ctttaaatat tttgctgatg aaaaggttga ttttgctgtt
     1801 atagaaaccg gactgggagg aagacttgat tccacaaact tatgcaatcc tattatctcg
     1861 atcatcacta atattggtat agaccatacc attcttttag gggattccct cacaaagata
     1921 gcgagtgaaa aggcagggat aattaaatct gctattcctt tagttgtagg aaaacatcaa
     1981 gctgaaactg ataaaatttt tgaattagcg tgttcaaaga taaaggctcc tttgtttttc
     2041 gctgaagatg atatggagtt gagggttttt caatcggatg atgaagatat tcagacgatg
     2101 gatgtatggt acaaaaacga aaaaatcatt actggtctaa aatcaccatt actcggtaga
     2161 tatcaggaag agaatatctg cacagcactc agatcaattg aattattaaa tgaaaataag
     2221 cacatagatg taaccagcag tgagataagt gatggcgttg agaatataat tagcaatact
     2281 ggattttacg ggcgatggca aaaattgagt acaaatccac taacaatttg tgatactgga
     2341 cataacattg atggaattaa ggcagttata aaacaattgg atgacttaaa ctttacgcat
     2401 cttcattttg tacttggaat ggtaatcgac aaagatgttt ttagcatcct aacaatatta
     2461 ccaaataaag ctacctatta tttctgtaaa ccggatatcc ctcgaggaat ggatcaggag
     2521 gaattagcac aatctggatt caaagctggt ttgaacggaa agtcatataa ttctgtaaca
     2581 caagcctatc actcggcaat aaacaatgca ggtgttaatg atttggtttt tatcggtgga
     2641 agcacatttg ttgtcagcga agtgatttag gaaaatatga aagaataata atgtaatcaa
     2701 tggtatgagc cttttcaaca taattcaatt aggattattg gcagtgttgc tagcatattt
     2761 cttttattac gtctatacaa tgttgtttga caaatcatac caaccactgg tttggaaagc
     2821 acagttacaa aagggattga tttcaaagga attaaaacat gctgaaaaga aatactctga
     2881 tcataatcgc ttttttaatt tctggtttca agttgaaaga ctgaaaaacg caaatgttgc
     2941 tggttcattt gccgaattag gtgtttataa aggtgattct gcaaggataa ttcatctaat
     3001 ggatccctca agagactttc atttgtttga tacttttgaa ggatttcaag aaaaagattt
     3061 ggagattgaa actggaaaag cagctagcta tacaagtcac aattttgcag acacatctat
     3121 tgaaagagta cagcaaaaac taac
//
LOCUS       DASCQP010000574         1958 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002067760, whole genome shotgun sequence.
ACCESSION   DASCQP010000574 DASCQP010000000
VERSION     DASCQP010000574.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1958)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1958)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1958
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002067760"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            103..>1958
                     /locus_tag="QF480_09880"
     CDS             103..>1958
                     /locus_tag="QF480_09880"
                     /inference="COORDINATES: protein motif:HMM:NF012376.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HJN06913.1"
                     /translation="MKSVLFLIAFLLFNLICFGQRSELSEAVQKYGHNVPSVFSGIMP
                     DNEGGYYFVSVKSGDTAWMVENNIFYTLENIQINPKGTDKGLFFNFKNKSFFGTLYYG
                     LFAKNDSKYPQPVYLSKNSIIIEGKAEIDISIMKEKYDIAGWVKSGKGRIGYRIIDNY
                     GDIIYDGIISFKGKGPFKVDMSVIAGPYVNNVSHKEVVISFETNKPCLPNIVVNGNIY
                     MDLKNLSKKGLKHEIPIGDLEPDKEYNYTVNYGKNQLTYSFKTAPTPGTRKPFTFAFT
                     SDSRAGSGGGERNIYGVNVYIMKKMAALAAQQGASFFQFTGDMITGYSSSIGSNMLEY
                     ANWKRSVESIWHYLPIYVAMGNHEALVNIFDDGSAWGISIDKFPFKTKSAETIFSNNF
                     VNPQNGPQSEDSAYYDPDKSKLNFPEYGESVYSYIYDNIAIVVLNSNYWYTPTKKMIS
                     EIGGNPHGYVMDNQLLWFEKKINELNSNSHIDHIFVTIHTPAFPNGGHAKDDMWYYGN
                     NKIRPTVAGEPVNVGIIERRDELLDIMINKSDKVIALLCGDEHNYSRMKLTKNTPIYP
                     KGYNGKKLKVSRPFWQITNGSAGAPYYGQQQLPWSESVEKFTTQYALMLFDI"
BASE COUNT          687 a          297 c          365 g          609 t
ORIGIN      
        1 gaagattaat gcataattac ggtattcctt ggaagtagtt tgtttatcta ttaattttgg
       61 cagacaaaat acggaattac aaataacaaa aaaatgtaat caatgaaaag tgtattgttt
      121 ttaatagcgt ttttgttatt taaccttatt tgtttcggac aacgaagtga actttcggag
      181 gctgttcaaa aatatggtca taacgttcct tctgtatttt caggcataat gcctgataat
      241 gaaggtggtt actattttgt atctgtaaaa tcgggtgata cggcatggat ggttgagaat
      301 aacattttct acactcttga aaatattcag attaatccta agggtacaga caaaggatta
      361 ttctttaact ttaaaaacaa atcatttttt ggaacacttt attatggctt atttgcaaaa
      421 aatgattcaa aatatcctca gccagtatat ttaagcaaga attcaataat tattgaaggg
      481 aaagctgaga ttgatattag tattatgaag gaaaaatacg atatcgcagg ctgggtaaaa
      541 agtggtaaag ggagaatcgg ctaccgaatt attgataact atggtgatat tatttacgat
      601 ggaattatct cctttaaagg aaaggggcct tttaaggtag atatgtctgt aattgcaggc
      661 ccttatgtta acaacgtttc acacaaagaa gttgttattt catttgaaac aaataaaccc
      721 tgcttgccaa atattgtagt taacggaaac atctatatgg atttaaagaa tctttctaag
      781 aaaggtttaa agcacgagat accaataggt gatcttgagc cagataaaga gtataattat
      841 actgttaact atggcaaaaa tcaacttacc tatagtttta aaaccgcccc aacaccagga
      901 acaagaaagc catttacatt tgcttttaca agtgattcac gtgctgggag tggtggtgga
      961 gaaagaaata tttatggagt caacgtctat atcatgaaaa aaatggcagc acttgcagca
     1021 caacaggggg cttccttttt tcagtttaca ggggacatga ttaccggata ttcatcaagt
     1081 attggcagca acatgcttga atacgcaaat tggaaaagat ctgtagaatc aatttggcat
     1141 tatcttccaa tttatgttgc catggggaac catgaggctt tagtaaatat ttttgatgat
     1201 ggaagtgcat ggggcatttc tatagataag tttcccttta aaacaaaatc tgctgaaact
     1261 atattttcaa acaactttgt aaatcctcaa aacgggccac aaagtgaaga cagtgcttat
     1321 tatgatcctg ataaatcaaa acttaatttc ccagaatatg gtgaatccgt ttattcctat
     1381 atatatgata acattgctat tgtagtgtta aattctaatt attggtatac tccaactaaa
     1441 aaaatgattt ctgaaatagg aggtaatcca catggttatg ttatggataa tcaactgttg
     1501 tggtttgaaa agaaaattaa tgaactcaac agcaattcac acattgatca tatttttgtt
     1561 accatacata ctcctgcctt tccaaatgga ggtcatgcta aagatgatat gtggtactat
     1621 ggtaataaca aaatacgccc aacagtagct ggcgaaccag ttaatgttgg aatcatagaa
     1681 aggcgtgatg aattactgga cattatgatt aataaaagtg acaaagtaat tgcacttctt
     1741 tgtggtgatg aacataatta cagcagaatg aaactcacta aaaacacacc aatttatcct
     1801 aaaggctata atggaaaaaa acttaaagtt agccggccgt tttggcaaat cacaaatggc
     1861 tcagcaggag ccccttatta tggccagcaa caattgccat ggtctgaatc ggttgaaaaa
     1921 ttcacaactc aatatgcatt aatgctgttt gatataga
//
LOCUS       DASCQP010000575         4624 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002070864, whole genome shotgun sequence.
ACCESSION   DASCQP010000575 DASCQP010000000
VERSION     DASCQP010000575.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4624)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4624)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4624
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002070864"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..243
                     /locus_tag="QF480_09885"
     CDS             <1..243
                     /locus_tag="QF480_09885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019540796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HJN06914.1"
                     /translation="SIAQELGSRNIRCNAIAPGFIETEMTQKLSDEVREEWVKTIPLR
                     RSGKPDDVADVATFLASDLSGYVTGQVINVCGGMST"
     gene            378..2459
                     /locus_tag="QF480_09890"
     CDS             378..2459
                     /locus_tag="QF480_09890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06915.1"
                     /translation="MPELTISYSWWTILVVIIIGLAYSSLLYTKNPLNKLSFILTILL
                     FVFRFFTVSILVFLLLSPNIKTKRKQIEKPIIIFGQDNSRSILMTGDSIYYTDTLVIG
                     LNSIMSELSQNNEIVSYLFGDIVSEGSYPDYSDNKSNYSDFFKHIRQNYTGLNVGAII
                     LAGDGIVNNGIDPVYSASNISYPVYTIALGDTSQTRDIKIDDIRHNSLVYLDDIFPVE
                     VSLSANLLKGNRTKIKLLENNKVIAQKEVVISNDSYRKSVIFNIEAENTGRRRFSLML
                     EPIEGETNIENNVRNIFIDVLNSRQKILLLANAPHPDIGALNQSLLTNRNYEVEIEYI
                     RNFSKKVDEFDLVVLHQLPSKTNAAISVLRNIVDNEIPVLYILGNQSQLSVFNRHFEG
                     MDVRSAAGSTVSAQFEFNNSFTYFSFNDELATQLASLPPLVVPLGNYVLSTGAEVFGW
                     QRINGTITDFPLIAFFNIINLKSGVISGEGLWLWRIHDYLLYNNSSAVDAFVSKAVMF
                     LIAAVDKRQFRVITQGEFNSRQDVELVAELYNSALELDNSAEVHLTLTNETNEKFNFA
                     FSPYDDYYTLNLNKLPVGVYGYRASVKLGSKNYSDVGEFIVQQLDNESKNLNADYGML
                     SRLASEHDGNMYYTDELNELMLAINNTTMTSKIHYEDKFSGLNTIYLVLAILVLLLSV
                     EWFLRKYFGSY"
     gene            2476..3714
                     /locus_tag="QF480_09895"
     CDS             2476..3714
                     /locus_tag="QF480_09895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013444171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HJN06916.1"
                     /translation="MVNTLFWLIIAIIIFDYLLEKFLDYLNYTKMQESIPEELKGIYD
                     EEKYRKSQQYEKVNLAFSTITSTLSFIVILTLLFADGFAFLDNYVRSISQNEYLRTLL
                     FFGILGLCMDLISIPFQIYGTFVIEERFGFNKTTPLTFILDKIKSWLLSIIIGGGLLM
                     FIMWAWNETGDWFWIIVMGGLSVFMIFMTMFYSRLIVPLFNKQVPLEDGSLKKAIVAF
                     SEKAGFKIDNIFSIDGSKRSTKANAYFSGMGPKKRIVLYDTLINDLEEEEIVAVLAHE
                     VGHYKLKHVIIGLVMSLVQSALLIWLLSVAISQPELSLALGASSPSFYMGIIAFGLLF
                     SPVSTIIGIISNMISRKHEYQADAYATSYGYGSMLIAGLIKLSVANLSNLTPHWLYVF
                     FNYSHPTLLQRRDAVLSKES"
     gene            complement(3757..4152)
                     /locus_tag="QF480_09900"
     CDS             complement(3757..4152)
                     /locus_tag="QF480_09900"
                     /inference="COORDINATES: protein motif:HMM:NF014453.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HJN06917.1"
                     /translation="MRKKRISLLDSTFFKVKGDPRITPVGKFLRNTNLDEFPQFLNVI
                     KGDMSIVGNRPLPLYEAEKLTTDEWSYRFLAPAGITGLWQVHKDKNLKAENRIRLDNK
                     YAMSSSPIQDVVVILKTIVSFFSMRNTDY"
     gene            complement(4162..4551)
                     /locus_tag="QF480_09905"
     CDS             complement(4162..4551)
                     /locus_tag="QF480_09905"
                     /inference="COORDINATES: protein motif:HMM:NF014453.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HJN06918.1"
                     /translation="MTLKKEQQFDNYRIGVWKRLVDIIFSALALTIFSPILLLIAIAI
                     KLTSKGPILFKSLRVGTGYDIFTFYKFRTMYLGADKERSKLSSLNEYLISHKKTPSEF
                     TNIEICPDCKEGKTCSPILFIDGVEIC"
BASE COUNT         1494 a          693 c          834 g         1603 t
ORIGIN      
        1 tcaattgctc aggaattggg ttcgcgaaat attcgttgta atgcaatcgc acctggattt
       61 atagaaactg aaatgactca aaaattaagt gatgaggttc gcgaagagtg ggttaaaaca
      121 attcctctga ggcgttcagg taaacctgat gatgttgctg atgtcgctac attcctcgct
      181 tccgatttat ctggctacgt tacaggtcag gtgataaatg tttgtggtgg tatgagtact
      241 tgatgattga ataattagta attggatgat tggtaattgg atgatcaaaa atgaataatc
      301 gccaatgact aataactatt gactaatgac caatccccta ttccctatgg actaataacc
      361 tatgactgct aacaactatg cctgaactaa ctatttcata ttcgtggtgg actatcctag
      421 tggttattat tataggacta gcttattcga gtttattata tactaagaat cccctaaata
      481 aactgagttt tattttaaca atcctgttgt ttgtttttcg gttttttaca gtatctatcc
      541 ttgtattttt actgctttcg ccaaatatta aaacaaagag aaagcaaatt gaaaagccaa
      601 taataatatt tggtcaggat aattcgagat cgattttaat gacaggggat tcaatctatt
      661 acactgatac tcttgtaatt ggccttaata gcattatgag tgaactttct caaaacaatg
      721 agatagttag ttatttattt ggcgatattg ttagtgaagg atcttatccc gattatagtg
      781 ataataagtc taattattct gattttttta aacatataag gcaaaattac acgggactca
      841 atgttggtgc aatcatacta gctggcgatg gaatagttaa taatggtatt gaccctgttt
      901 attcagcatc caacataagt taccctgtat atacaattgc actgggtgat acttctcaaa
      961 cccgagatat taaaattgat gatattaggc ataattcttt agtgtattta gacgatattt
     1021 ttcctgtaga ggttagcttg tctgccaatt tactaaaggg aaatagaact aaaattaaat
     1081 tactggagaa taataaagtt atcgctcaaa aagaagtagt tatttctaat gatagctata
     1141 gaaagtctgt aattttcaat attgaagctg aaaataccgg aagaaggcga tttagtttga
     1201 tgcttgagcc gattgaaggt gaaacaaata ttgagaataa tgttagaaat atttttattg
     1261 atgttctaaa tagcagacaa aagattttac tactagcaaa tgccccccat cctgatatag
     1321 gagcattaaa tcaaagtctt cttacaaata gaaactacga ggttgagata gaatatatca
     1381 gaaactttag taaaaaagtt gatgagtttg atttagtagt acttcatcaa ctaccttcaa
     1441 aaacaaatgc tgcaataagt gttctaagaa atatagttga taatgaaata ccagtgcttt
     1501 atatcttggg taatcaaagt caattatcag tttttaatcg ccattttgaa ggcatggacg
     1561 taaggtcagc tgctggtagt acagtctcag cacagtttga gtttaataat tcatttacat
     1621 atttttcttt taatgacgaa cttgctacac aattagcatc ccttcctcct ttagttgttc
     1681 cacttggtaa ttatgtgctt tctacaggcg ctgaggtttt tggttggcaa cgaattaatg
     1741 gtactataac agattttccg ttaattgcat tctttaatat tatcaacttg aaaagtggcg
     1801 tgatttcagg ggaaggtttg tggttatggc gtattcatga ctatttgctt tataataatt
     1861 catctgctgt tgacgccttt gtaagcaagg cagttatgtt cctgattgct gcagttgaca
     1921 aacgacaatt tagagtaatt actcaaggtg aatttaatag tagacaggat gtggaattag
     1981 ttgctgagct ttataactca gcccttgaac ttgataattc agcagaggtt catttaacac
     2041 ttactaatga gactaatgaa aagttcaact ttgcgttttc accttatgat gactattaca
     2101 cactcaactt aaataagcta cctgtcggag tatatggcta tcgtgcatct gttaagcttg
     2161 gtagcaaaaa ttatagtgat gttggtgagt ttattgtcca acagcttgat aatgagagta
     2221 aaaatttaaa tgcagattat gggatgctaa gccggttggc aagtgaacat gatggcaata
     2281 tgtactatac tgatgaatta aatgaactta tgttggctat taacaatacc actatgacgt
     2341 caaaaattca ttacgaggat aagtttagtg gcctaaacac aatatattta gtattggcaa
     2401 ttttagttct acttctgtcg gttgagtggt ttttaagaaa gtactttgga tcttattaat
     2461 tgatatacaa taaatatggt taatactctt ttttggctga taattgcaat aattattttt
     2521 gattacttgt tagaaaagtt tctggattat cttaattata ctaagatgca ggaatcaatc
     2581 cctgaagaat tgaagggaat ttacgacgaa gagaaatatc gcaaatcgca acaatatgaa
     2641 aaggttaatc tagctttttc aacgataacg agcaccttat cttttattgt aatactgaca
     2701 ttactgtttg cagatggatt tgctttcctg gataactatg taaggagtat ctcgcaaaat
     2761 gaatatttga ggactttgct tttctttggt atcttaggtc tttgtatgga tctgatatca
     2821 ataccttttc agatttatgg aacctttgtt attgaagaga ggtttggttt taacaaaaca
     2881 acaccactaa cttttattct tgataaaatt aagtcgtggc tattaagtat aataatagga
     2941 ggtgggttat taatgttcat tatgtgggca tggaatgaaa caggtgattg gttttggata
     3001 atagtgatgg gagggttaag tgtttttatg atttttatga ccatgttcta ctcacgactt
     3061 attgtcccat tattcaataa gcaagtacca ttagaagatg gcagccttaa aaaggctatt
     3121 gtagcttttt cagaaaaggc cggattcaaa attgataata ttttttcaat tgatggttcg
     3181 aagcgaagca caaaggcaaa tgcatatttt agtggaatgg gacctaaaaa gcgtattgtg
     3241 ttgtatgata ccttaataaa tgatttggaa gaagaggaaa ttgttgcagt acttgcacac
     3301 gaagtaggtc actataaact aaaacatgtt atcattggat tggtaatgtc attagtgcaa
     3361 agtgcattat tgatatggct actttcagtt gctataagcc aacctgaatt atctttggca
     3421 ttaggtgctt catctccaag tttttacatg ggaataattg cctttggttt attgttctca
     3481 ccagtatcaa ctataatagg catcatctca aatatgatct ccagaaagca tgaatatcag
     3541 gcagatgctt atgctaccag ctatgggtat ggaagtatgt taattgcagg tcttattaaa
     3601 ctttcggtag cgaatctaag taatttaact ccgcactggt tatatgtatt ttttaattat
     3661 tcgcatccta cattgctaca aaggagagat gctgttctca gcaaggagtc ttaattgtga
     3721 tgttgaacaa gaaaaaatca ggataatttt acttttttaa taatcagtat ttctcatact
     3781 gaaaaaactg actattgttt tcaatataac tacaacatct tgaattgggc tggaagacat
     3841 tgcatattta ttgtctaatc ggattctgtt ttcagcttta agatttttgt ctttatgtac
     3901 ctgccaaaga ccagtaatac ctgcaggagc taaaaatcta tacgaccatt catctgtggt
     3961 aagtttttcg gcttcgtaaa gtggtaatgg acgattccct actattgaca tatctccctt
     4021 aattacattt aaaaattgag gaaactcgtc taaattagta tttcttaaaa atttaccaac
     4081 gggagttatt cggggatcac ctttaacctt aaagaaagta gaatctaata gactaattct
     4141 tttctttctc aaatataaat tctaacatat ttctacacca tcaataaata atattggtga
     4201 gcaagttttt ccttctttac aatctgggca aatttcaata tttgtgaatt cgctgggagt
     4261 ctttttatga gaaataagat attcatttaa cgatgataac ttcgaccttt ctttatcagc
     4321 tcccagatac atagtcctaa acttgtaaaa agtaaaaatg tcatatcctg tacccaccct
     4381 taacgattta aacaatattg ggccttttga ggtcaactta atcgctatcg caataagtaa
     4441 caatatagga gaaaagatag ttaaagctaa tgctgaaaaa atgatatcaa ctagtcgttt
     4501 ccaaactccg atacgataat tatcaaattg ttgctctttt tttaatgtca taatatttcc
     4561 catatcctat caaaaatgat tttgcgaaat tcttatttaa aaaaattatc catatcaaag
     4621 ccat
//
LOCUS       DASCQP010000576         9281 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002073602, whole genome shotgun sequence.
ACCESSION   DASCQP010000576 DASCQP010000000
VERSION     DASCQP010000576.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 9281)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9281)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9281
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002073602"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(220..1230)
                     /locus_tag="QF480_09910"
     CDS             complement(220..1230)
                     /locus_tag="QF480_09910"
                     /inference="COORDINATES: protein motif:HMM:NF015983.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HJN06919.1"
                     /translation="MAKHYTIPIFVPELACPFQCVFCNQEKISGHQNIPDRNEIINTI
                     EVYLKTFKSKKRIVEVGFFGGSFTGIPIDEQLYYLEIIKPFINAGTIQGIRLSTRPDY
                     INDGILKMLYQNHVTTIELGAQSFDDDVLQKSFRGHTANQIEIASKMIIDTGFKLGLQ
                     MMIGLPGDTIEKAIYTANKIIESGAHETRLYPTLVIRDTALHKLYSNEKYKPLTLKQA
                     VEWTKQILPLFEEAGVRLIRVGLHPSDGLVSGNELVDGPFHSSFKELVISSLWADLLT
                     PLLINGTDKNIEIHVPTKEINYAIGHKSANKKMLLERFNSVKFVPEVSYSARNFTLKS
                     LN"
     gene            1382..2032
                     /locus_tag="QF480_09915"
     CDS             1382..2032
                     /locus_tag="QF480_09915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06920.1"
                     /translation="MKNPTRILMFLLAAIIITSGASSCKSKKKLAREKAAAEYKMKVE
                     QSKKDLTAMLNGTTNWSLDEQDKRLEVIKSYNIDDPEVNDLISKVESKLSTDRADAER
                     QAEEERLKREEEKRAMVAASKYQEIDNQLIAIANATNTDDANEQINLILQQFATPDIP
                     VLIIISKAGGFNDYDRPTTISMFLNYLKDKKQYFYKVDAVKHDGLGKITELELIKN"
     gene            2040..2615
                     /locus_tag="QF480_09920"
     CDS             2040..2615
                     /locus_tag="QF480_09920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06921.1"
                     /translation="MKRTYLWIIILAMSFSISGIAQVELSYERKQAIDSLAIEKARDL
                     SKYISIIGSKETPWSEANRVIDRAEELFMAGSEIGVSSLRKPEISYYNVREYFERLMR
                     LNYRKVEIEWYNIEYMSDLQKQPDGTYVGVITIFQKFKGFDAEGRLVYQDTTKKDITV
                     YVKRKETQIGGRLIGFWDVLLGDMRVKETTP"
     gene            complement(2654..3460)
                     /locus_tag="QF480_09925"
     CDS             complement(2654..3460)
                     /locus_tag="QF480_09925"
                     /inference="COORDINATES: protein motif:HMM:NF022750.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
                     /protein_id="HJN06922.1"
                     /translation="MHHKTRFLFLLTLCLYATNFLFSQDTVINHAFKTGEYLKYRVYY
                     SSAVGNFTAGEAILTVGKWEDKYAGKTKDVYRITGIGNSKGMFNWFYKVRDKFETFTD
                     KNTLLPYAFIRKTREGKYEQDDIVIFDREENEAITNSIEVKAIPPNVHDMISAFYYMR
                     TITLEDFDADSMYFINFFLDDSVYVSAVKFMGKSEINTKWGDIGCLKFAPMMASGEVF
                     ADKYPMSVWISDDENHIPILVESAVIVGSVKMELIEFGGLVNPMKINLEE"
     gene            complement(3503..6295)
                     /gene="leuS"
                     /locus_tag="QF480_09930"
                     /pseudo
     CDS             complement(3503..6295)
                     /gene="leuS"
                     /locus_tag="QF480_09930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013612821.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004823 - leucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006429 - leucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
     gene            complement(6441..7736)
                     /locus_tag="QF480_09935"
     CDS             complement(6441..7736)
                     /locus_tag="QF480_09935"
                     /inference="COORDINATES: protein motif:HMM:NF024910.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HJN06923.1"
                     /translation="MQDSKIGTFSAMSIGIGGMVGGGIFAVTGLTVELTKGSAPLAFI
                     IAGIVALLTAYSYWKLSLYLPNNGGTVYFINKAFGSSTLTGSINLLLFLSYIILISIY
                     AFAFGAYGARLFPPEWYQWLKHGLITFILIALATINYFSASLVIKSENILNLVKMILL
                     AIFVVVGLITPIKWEQMDTANWVDPFAMVSGAMIIFLNYEGFELIANASSNIRKPKIA
                     LPIAYIGGVLIAITLYVLIVIVVVGHLSFFEITKYSEHVLSDTASQFMGKSGLIIISV
                     AALLATSSAINATYYGSGRLTYTIANSGELPKILEKSIHNQPVYGMIIFAILALFVAN
                     LIPLGAIATMGSAGFLLVFMMVNIANFKMYKTTKSSRIITLLGAFSCAIAMGALIYAT
                     VKDANTRWEVLILIAMMGGALLIETIYRKYFLNNVDKQK"
     gene            7975..8859
                     /locus_tag="QF480_09940"
     CDS             7975..8859
                     /locus_tag="QF480_09940"
                     /inference="COORDINATES: protein motif:HMM:NF037183.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease-like cell division protein FtsX"
                     /protein_id="HJN06924.1"
                     /translation="MASYNEKYYKRKINTSYITSVISITLVLFTLGFLGLFVLHAKSL
                     SNYIKENIGFEIIMKDGIKEADIIYLQKQLDINPAIKSTEYITKEEATRKLANVLGED
                     FTEFMEDKYNPLLPSIDVRFNADWANNDSILLMENFIRANNSVKEVYYQKSVVHLINR
                     NLQKISLILFGFSLLLLFITVALINNTIRLSIYSKRFIIRSMQLVGATEGFIVKPFII
                     IGFVQGLVSALIAVGLLQGILIAAQQSIPELVLLSSREMLIYLNVFVLVCGLLIAGIS
                     TFFAVDKYLRMKTDAMYG"
     gene            9054..>9281
                     /locus_tag="QF480_09945"
     CDS             9054..>9281
                     /locus_tag="QF480_09945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009597622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3098 domain-containing protein"
                     /protein_id="HJN06925.1"
                     /translation="MSAKVQKQMKEENKLMFAFNKTNYIIVIVGLLVIITGFLLMVGG
                     GSDDPEVFSEAIFGFRRLTLAPILIIVGYMIE"
BASE COUNT         3060 a         1624 c         1520 g         3077 t
ORIGIN      
        1 catctggtgt atttggagca attattagtt gatcatctga taaacataag aacacatcag
       61 ggtgacatga aattgatgga tatgttaatc ctgtggtttc aaaagtcaga actcggccat
      121 attcttttaa tcgttttaaa gctagttcgg gaatattttt atttgctata attatcattt
      181 tatctaaccg gacaaaagat tgtacttgct gtcttacttt taattcaggg attttaatgt
      241 gaagtttcgt gcagaataag atacttctgg cacaaactta accgaattaa atctctcaag
      301 taacattttt ttatttgctg atttatggcc gatagcataa ttaatctctt tggtaggaac
      361 atgtatttct atatttttat cggtcccatt aataagtagt ggtgtcagta ggtcagccca
      421 taatgatgag attacaagtt ctttaaatga agaatggaaa ggcccgtcca ccagttcatt
      481 gccagaaaca agtccatcag agggatgtaa tccgacacga atgagcctta caccggcctc
      541 ttcaaaaagc ggaagtattt gttttgtcca ttcaacagct tgttttagtg tgagaggttt
      601 atacttttca ttagagtaca acttatgtaa agctgtatcc cttattacta aggtaggata
      661 aagacgtgtt tcatgtgctc cggattcaat tattttattg gcagtatata ttgctttttc
      721 aatcgtgtca cctggcaaac caatcatcat ctgcaatcct aatttaaagc cggtatcaat
      781 tatcattttt gatgctattt ctatttgatt agcggtatgc ccacgaaacg acttttgtag
      841 tacatcatca tcaaacgact gagctccaag ttcaattgtt gtaacatgat tttggtatag
      901 catttttaag atgccatcat taatataatc aggccgggtt gataatcgaa ttccctgaat
      961 agtaccagca ttaataaaag gcttaataat ttcaaggtag tatagttgtt catcaatagg
     1021 gatacctgta aagcttcctc caaaaaatcc aacttcaaca atcctttttt tagatttaaa
     1081 agtttttaag tatacttcaa tagtattaat aatttcattt ctatctggaa tattctggtg
     1141 gccggaaatt ttttcctgat tacaaaacac acattgaaag gggcatgcta gttcaggaac
     1201 aaaaattggt attgtatagt gcttggccat agaaattatt tcacaaaggt tgcacaattt
     1261 tttcgatact tttgcattat tatacttagt gaagttaggt ttgtaaccaa attgagaatt
     1321 tattttctat catattacac taaacaaaat aactatcaat cataagaata tgaaattagt
     1381 gatgaagaat cccacaagaa tattgatgtt tttactggca gcaataatta ttacaagtgg
     1441 tgccagctct tgtaaaagca agaaaaaatt agctcgcgaa aaagccgcag ctgaatataa
     1501 aatgaaagtt gaacagtcta aaaaagatct cacagccatg ttaaacggta caacaaactg
     1561 gagtcttgat gaacaagaca agcgtttgga agtaattaaa tcatataaca ttgatgatcc
     1621 agaagttaat gatcttatat caaaagttga atcaaaactc tcaacggaca gagcagacgc
     1681 agaacgccag gctgaagagg aaaggctgaa gcgtgaagaa gagaaacgag caatggtagc
     1741 tgcatctaag tatcaggaaa ttgacaatca gcttattgcc attgcaaatg caactaatac
     1801 ggatgatgct aatgagcaaa taaatttgat attgcaacag tttgctacac ctgatatccc
     1861 tgtacttatt attataagta aggctggagg atttaacgat tacgatcgtc caactacaat
     1921 aagtatgttt cttaattatt taaaagataa aaaacaatat ttttacaaag ttgatgcagt
     1981 aaagcatgac ggtttgggaa agattacgga actagaatta attaaaaatt aaagaaatta
     2041 tgaaacgaac atatttgtgg attattattt tggcaatgag cttctcaatt tccggaattg
     2101 ctcaagtcga attaagctat gagcgcaaac aggcaatcga cagccttgcc atcgaaaaag
     2161 cacgtgacct aagtaaatat ataagtatta ttggaagtaa agaaacacct tggagtgaag
     2221 caaatcgagt aattgataga gctgaggagt tatttatggc aggtagtgaa ataggagttt
     2281 cttcattacg taagccagag ataagctatt ataatgttcg tgaatatttt gaaagattaa
     2341 tgcgattgaa ttataggaag gtggagatag aatggtataa tattgaatat atgagcgacc
     2401 ttcagaagca accggatggc acatatgttg gagttattac aatattccag aagttcaaag
     2461 gatttgatgc tgaaggaagg cttgtttatc aggatactac taagaaagat atcacagttt
     2521 atgtaaaacg aaaagaaaca caaattggtg gtcgtcttat tggtttctgg gatgtgcttt
     2581 tgggagacat gcgtgtgaaa gaaacaacac cctaaattgg aagacagaag tcatatctaa
     2641 tatttcaatg cgttcactct tccagattaa ttttcattgg atttaccagt ccaccaaatt
     2701 cgatcaattc cattttaaca gaacccacta taaccgctga ttcaacgagt atcggaatat
     2761 gattttcatc gtcacttatc cagacagaca tagggtactt gtctgcaaaa acttctcctg
     2821 aagccatcat tggagcaaac tttaagcatc caatatctcc ccatttggtg ttaatttctg
     2881 atttacccat gaatttaacg gctgacacat acaccgaatc atctaaaaag aaattaataa
     2941 agtacatact atcagcatca aaatcctcca gggttatggt acgcatgtaa taaaaagctg
     3001 atatcatatc gtgaacattg ggaggaatag cttttacttc aatagagtta gtaatagcct
     3061 cattttcttc cctgtcgaaa ataacaatat catcctgttc atattttcct tcacgtgttt
     3121 ttctaataaa cgcatatgga agcagagtgt tcttgtccgt aaaagtttca aacttgtcgc
     3181 gaactttata aaaccaatta aacatacctt ttgaatttcc aatacctgta atacggtata
     3241 catctttggt ttttccagca tacttatctt cccacttgcc aactgtaaga atagcctcgc
     3301 ctgcagtaaa atttccaaca gctgaactat aataaacccg gtatttaaga tattcacctg
     3361 ttttaaatgc atggtttata actgtatctt gtgaaaacaa aaagtttgtt gcatacaaac
     3421 ataatgttag tagaaatagg aagcgagttt tgtgatgcat ttttaagtag ctataatata
     3481 tgttattaat atttctttac tactaactta ctacaatatt aataattctg ttaggaacca
     3541 cgataacttt cctaatcgtt tttccttcaa tccattttgg agtttctttt gcgttaatag
     3601 ccgctttttc aatttcaggt ttaggcatat taataggcaa aattatttta aacctcaatt
     3661 taccattaaa agaaacagga tattcaaagg tgttttcttt taaatagttt tcattatgag
     3721 cgggatatga agctgcacaa atactactat catatccaaa agttttccat atttcttctg
     3781 taatgtgcgg tgcatatggg cttagaagga ctgcaagtgg ttctaaaatt tctctgttat
     3841 gacagtctaa atcacttaat tcatttacac aaatcataaa ggcacttaca ccggtattaa
     3901 atgaaaaccg ttcgatatca gacgtaactt tttttatagc tttatgaaga gattttaatt
     3961 cttcttctga agtattttta tcgttaacga taaagttatc atcatcatca aaatacaact
     4021 tccaaaattt tctcaaaaat ctgaacacac cttctattcc atgtgtatcc catggcttat
     4081 cttgctcaag aggccctaga aagatttcat ataatctcag tgtaccagct caatattttt
     4141 caattaatgc atccgggttt tgaacattgt gttttgattt cgacattttt tcaatctcat
     4201 gaccacaaat atattttcca tcttccagta taaaagttgc atctttgaat tcttccctcc
     4261 agttcttaaa agcattaata tccagtacat cattatcaac aagatcaata tcaacgtgta
     4321 actcctgaac tttatattct ttgcgaatgt tatatgagac aaacttattt gttcccataa
     4381 ttcgatatac aaaactggac cttccctgta ttttaccttg atttattaat tttttgaaag
     4441 gttcatcttc acacacaagt cctttgtcga aaagaaattt actccaaaac cttgaataaa
     4501 tcagatggcc agctgcgtgt tcatcaccac caatatatag atctacatcc tgccagtaat
     4561 tgtttgcttc ttttgaaaaa tattctttct cgttgtgtgg atccatatac ctaagataat
     4621 atccacacga tcctgcaaaa cccggcatgg tgttagtttc cagtggataa ccatctttat
     4681 taacccagtt ttgagcattt gcaagtggag ggtttccttc gcttgttggt aaatagcttt
     4741 caacctttgg taatttaaga ggcagctcac tttcactaag tgcataaggc attccatctt
     4801 tataataaat aggaaaaggt tcaccccaat atcgctgacg gctgaaaata gcatcatgta
     4861 atcgataatt aatatttcct tcaccgatat tcatttcttc tatttttcta atcgtagcta
     4921 tcattgcatc aactaccggc attccattta taaatccaga gttgatcatt actccctctt
     4981 ttgaatcgta tgaatcatcc caactggctg ggtcggaggg gtcatctcct tctttaacaa
     5041 ctacctgtat aactggcaaa ttaaaatgcc ttgaaaaagc aaagtcgcga ctatcatgtc
     5101 ctggaacagc cattatagct cctgtgccat atcctgaaag tacatagtca gcaatccaga
     5161 ttggaatttt ctcttttgtt aacggattaa ctgcataagc tcctgtaaat tcaccactta
     5221 tatttttaac ctctgtcatt ctttcacgct cacttcggtt ttttgtccat gaaatataac
     5281 tttgaattgc ttctttttta tcagatgttg taattaaatc aacaagttca tgttcgggtg
     5341 ctaagaccat gaaggttgat ccgaagattg tatcaggccg agttgtgaat acttcaatct
     5401 ctccatcatg tggatcatta aaaaccttaa atttaattga agccccttca ctccttccaa
     5461 tccagtttct ttgcatctct ttaagtgaat caggccagtc aagaatatcc aatccttcaa
     5521 gcaatctttg ggcataagat gttattcgca acgaccactg tttcatcatt ttcttttcaa
     5581 caggataccc gccacgttct gataatccat ctttgacctc atcattagcc aacacagtac
     5641 ctaattcagg acaccagttt actattgaat tcgacaaata cgcaagcctg taattcatga
     5701 taatttcctg ctgggtcttt tcatcataat tattccaatc cttattggta aaaagttcgg
     5761 ttggagaaca aacagcatca atatcatgat taccattttt ttcaaattgc aaaacaaggt
     5821 cacttatact ttcggcctta ttggtcttat tattatacca tgaattaaag atttgaataa
     5881 aggtccattg tgtccacttg tagtaactgg gatcacttgt ccttatttct ctactccagt
     5941 cgaaggagaa tccaatttta tcaagttgct cacgatatct cagaatattc ttatcagtag
     6001 ttatttcagg gtgtgttcca ctttgaattg catattgctc ggctggtaac ccatatgcat
     6061 cgaaacccat tggatgaagc acattaaaac ctttgtgacg tttaaatcgt gcataaatat
     6121 ccgaagcaat gtatccaaga ggatggccaa catgtagccc tgagccagaa gggtatggaa
     6181 acatgtcgag cacataatat ttcggccggg tattatcaat atcagcctta aacgtttggt
     6241 taagtctcca atagtcctgc cacttttttt ctatacttct aaaatcgtat cccattatta
     6301 atattacttg ttgcgtttat tctgaattta tctttttcga tacgcaaaaa ttgaatctgc
     6361 gaaattaata aaagttacat ttggtgggtc acaaggataa aagtattctg cttgaaaagc
     6421 aatttaatta aagggatatt ttatttctgt ttatctacat tatttaaaaa atactttcga
     6481 taaatagttt ctattaataa cgcaccaccc atcatcgcta tcagaataag tacttcccag
     6541 cgtgtgttag catctttcac agttgcataa atgagagctc ccatagcaat agcacaggaa
     6601 aaagcaccta ataaagttat tattcttgag ctcttggttg ttttatacat cttgaaatta
     6661 gcaatattta ccatcataaa aaccaataga aatcctgcac ttcccattgt agctattgca
     6721 cccaaaggaa ttaggttagc tacaaacaat gccagaatag cgaatattat cattccataa
     6781 acaggttgat tatgaatcga tttttcaagt atcttcggta attcacctga attagcaatt
     6841 gtataggtga gtcgacccga tccatagtaa gttgcgttga ttgcagaact tgttgccagc
     6901 agggctgcaa ctgaaataat aattagacct gatttaccca taaactgact tgctgtgtca
     6961 gagaggacgt gttcactata tttagttatt tcaaaaaaac ttagatgtcc tacaacaaca
     7021 ataacaatca aaacataaag tgttattgct attagtacac caccaatgta tgcaataggt
     7081 aaagctattt ttggttttct tatattacta cttgcgttgg ctattagttc aaatccctca
     7141 taatttaaga agataatcat tgctccagat accattgcaa acggatcgac ccaattagct
     7201 gtatccattt gttcccattt tattggcgta ataagcccaa ctacaacaaa gatagcaagg
     7261 agtatcattt tgactaaatt caaaatattc tcggacttta tcaccagcga tgcactaaaa
     7321 taattaattg tagcaagtgc aataagaata aaggtaataa gcccatgttt gagccattga
     7381 taccattcag gaggaaaaag tctagcccca taagcaccaa atgcaaatgc atatattgaa
     7441 attaggataa tataggaaag aaaaagtagt agattaatac ttccagtaag agtactactg
     7501 ccaaatgctt tgttaataaa ataaactgta cctccattat ttggcaagta aagcgataat
     7561 ttccagtatg agtaggcagt taacaaagca acaataccgg caataataaa tgctagtggt
     7621 gccgacccct ttgtgagctc aacagttaaa cctgtaacag caaaaatgcc accaccaacc
     7681 attcctccaa tgccaatgga cattgctgag aaagtaccaa ttttcgaatc ttgcatttct
     7741 gtaacttctt aatttttgat aataatagtt attacgctat tcaggtttta tagtatttat
     7801 tatgccacta atgtagatga attaattgga ttctgaatag gtttcaaaat gaatccaaaa
     7861 ttaattagct gttttaatta atctattgtt tcttccaaat caatcttgcc attgattaat
     7921 tcccaaagaa ttactgcatt tcaaatatag atttgtttat tttagcctct taaaatggcc
     7981 tcatacaacg aaaaatatta taaacgaaag attaacacct catatattac ctctgtaata
     8041 agcattacac ttgttttatt cactctaggt tttctgggac tatttgtcct gcatgcaaaa
     8101 agtttatcaa actatattaa agaaaatatc ggtttcgaga taataatgaa agatggaatt
     8161 aaggaggctg atattatata tttacaaaag caattggata taaatcctgc tattaaatca
     8221 acagaatata ttacaaaaga agaagccaca cgtaaacttg ccaatgtatt gggcgaggat
     8281 tttactgagt ttatggagga taaatataac ccgttgctac catcaatcga cgttcggttt
     8341 aatgctgact gggcaaacaa tgatagtatc cttttaatgg agaattttat tcgagcaaat
     8401 aattcagtta aagaggttta ttatcaaaaa tcggtggttc atcttattaa tagaaacctt
     8461 caaaaaatca gcttaatatt atttggattt agtttattgc tattattcat aacagttgca
     8521 ttaataaata atacaatcag actttcaatt tattctaaga gatttattat tagaagcatg
     8581 caacttgtgg gtgccacaga aggatttatt gttaaaccat ttattatcat tggatttgta
     8641 caaggcttag tgagtgcgtt gatagctgtt ggcttattac aaggaatact tattgctgct
     8701 cagcaaagta tacccgaact tgtactactt tccagtagag agatgttaat ttatcttaat
     8761 gttttcgtgt tagtttgcgg tttgctaatt gcaggaatat ctacgttttt tgccgtagat
     8821 aaatatctaa gaatgaaaac tgacgctatg tatggatagt tgtaactggt taaagttgag
     8881 ccactaataa ttattttaat atatttcaaa cgtcttcttg tacatacttt tgtaatactc
     8941 cgattacgta aagcaagatt agctcaataa gattattaac ctaaatcatt tcgaatgcta
     9001 taatgaaaat taaacaatgt gattttattg tacttttgaa aaaaaattag attatgtcag
     9061 ccaaagttca aaaacaaatg aaagaagaga acaaattgat gtttgctttt aacaaaacaa
     9121 attatataat tgtaattgtc ggtcttctag ttataataac cggattttta ttaatggtag
     9181 gaggcggttc tgatgatccg gaagtattta gcgaagcaat atttggattc agaaggctta
     9241 cactggcacc tattcttata atcgtaggtt atatgattga a
//
LOCUS       DASCQP010000577         4957 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002074902, whole genome shotgun sequence.
ACCESSION   DASCQP010000577 DASCQP010000000
VERSION     DASCQP010000577.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4957)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4957)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4957
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002074902"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..564
                     /locus_tag="QF480_09950"
     CDS             <1..564
                     /locus_tag="QF480_09950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005854108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HJN06926.1"
                     /translation="LDSEPIKVNDKIGNPVMIGVVMVWQVDNTYNAAFDVDDYVHFVD
                     IQSEAAIRRLAGHYPYDNFEDEDANITLRGGGEAVNQMLEDEITKRLSIAGIRVIEAR
                     INYIAYAQEIAGAMLKRQQATAIIAARFKIVEGAVSMVEMALDSLSKREIIELDEEKK
                     ATMVSNLLVVLTSDKDVSPIVNTGTIY"
     gene            667..1197
                     /locus_tag="QF480_09955"
     CDS             667..1197
                     /locus_tag="QF480_09955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06927.1"
                     /translation="MTKIFFKEEQGFGSGPLYLIMGVIYAIPTIVFLIAFYQQYVLKQ
                     PWGDKPMSDTGLLITALVILAVLTISAFLLFGSKLLVEVTNESLHFTFKPFINKPISY
                     YKSDIERHEIREYKPIREYGGWGIKQGLKSIGKAYNVKGNIGLQLYLKNGKRVLIGTQ
                     RGDALNRAMKKMMEIN"
     gene            1200..1361
                     /locus_tag="QF480_09960"
     CDS             1200..1361
                     /locus_tag="QF480_09960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008144827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Arc family DNA-binding protein"
                     /protein_id="HJN06928.1"
                     /translation="MIKKKAFVLRVQPEVLESLEKWSQDEFRSINGQIEWILNNALSK
                     AGRKKKPKR"
     gene            complement(1399..3021)
                     /locus_tag="QF480_09965"
     CDS             complement(1399..3021)
                     /locus_tag="QF480_09965"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015546763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HJN06929.1"
                     /translation="MEKKVKYIFVTGGVSSSLGKGIISASLAKLLLGRGFSVTIQKLD
                     PYINIDPGTLNPYEHGECYVTDDGAETDLDLGHYERFSNTPTSQANNVTTGRIYQNVI
                     SKERKGEYLGTTVQVVPHITDEIKRSIQILGQTNKYDFVITEIGGTVGDIESFPFIET
                     VRQMKWELGSNCAVVHLTLVPYLKKAEELKTKPTQHSVKTMLEQGVQPDIIVCRTEYH
                     LNEGIKGKIAQFCNVSTTSVIESIDADTIYDVPLLMRDEKLDIEVLKVTDTPITNKLD
                     LANWERFVSRLKNPIGIVNIGLIGKYVELKDAYKSINESLVHGATENEYKVNIVSIQS
                     EKINASNVSKELDGLHGILVAPGFGGRGIDGKIDAIKYARENNIPFLGICLGMQCAAI
                     EFTRNILGLKEAHTTEIDTDSPYPVIDLMEEQKNISNLGGSMRLGLYDCHIDKDTLTY
                     KEYQKQDIKERHRHRYEFNNEYKSRFEENGMRIAGINQTKDLVEIIELKNHPWFIGVQ
                     FHPEYKSTVKEPHPLFIGFLRAAIKHKEQIGD"
     gene            complement(3156..4619)
                     /locus_tag="QF480_09970"
     CDS             complement(3156..4619)
                     /locus_tag="QF480_09970"
                     /EC_number="1.2.1.12"
                     /inference="COORDINATES: protein motif:HMM:NF006139.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006006 - glucose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HJN06930.1"
                     /translation="MVNKKNINGSYEDSLNEWARQEMIANEFISVLSKLFYNKSIELV
                     LFRSQLIDRSASLILYKHSYAENIINRQLNIKDSLKLAKAILHCNVKPSKIDIGKLNG
                     EWCDSKKDYVDADDFIKIKLKKFIGVEPKFKHPVDVVLYGFGRIGRLLARELIIQGNG
                     HQLRVRAIVTRGNGEDQIVKRASLLRHDSVHGPFRGIAIENPEEKTIYINGHLVLMLA
                     ANSPEEIDYTEYGINNAILIDNTGIYRDRGGLGRHLNAKGISKVLLTAPGKGDIPNIV
                     FGVNEKGVDYKKETVFSAASCTTNAAAPVLAVIEKEFGIAQGHLETVHSYTNDQNLLD
                     NMHKKTRRGRSAPLNLVITETGAASAASKIVPSLKGKLTGNAIRVPTPNVSLVVLKLT
                     LNRETSVEEINEIMRQTSLSGDLVAQVKYSTSADAVSSDFTSEPSTLVFDSNATLVSP
                     NKKGIVLYVWYDNEFGYALQVIRVAKNMAGVKRPTYY"
     gene            complement(4802..>4957)
                     /locus_tag="QF480_09975"
     CDS             complement(4802..>4957)
                     /locus_tag="QF480_09975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019967096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma factor-like helix-turn-helix DNA-binding
                     protein"
                     /protein_id="HJN06931.1"
                     /translation="YGIGRNYSLTLEEIGAKFDLTRERVRQIKEKAIRRLRHTARSRL
                     LKAYLGQ"
BASE COUNT         1541 a          882 c          824 g         1710 t
ORIGIN      
        1 ctggatagtg agccaataaa agtaaatgat aaaattggaa acccggtaat gattggagtg
       61 gtcatggttt ggcaagttga caatacttac aacgcagctt ttgatgttga cgactatgta
      121 cattttgtag atattcagag cgaagcagca atacgtaggc ttgcaggaca ttatccttat
      181 gataactttg aagatgagga tgccaatatt accttgcgtg gaggaggaga agcggtcaac
      241 caaatgctcg aagatgaaat tacaaagcgt ctttcaattg caggtattag ggtaattgaa
      301 gccagaatta attatattgc atatgctcag gaaattgctg gagcaatgct taaacgtcaa
      361 caagcaacgg ctattattgc tgcacgattt aaaattgttg aaggtgctgt tagtatggtt
      421 gaaatggcac ttgattcact ctccaaaaga gagattattg aacttgatga agagaaaaaa
      481 gcaacaatgg ttagtaattt actggttgta ttaacatccg ataaagatgt ttcaccaatt
      541 gttaatactg gaacaattta ctaaaatgat aaaatgttag aatagctgaa tgaaatatca
      601 gtaatagttt ctaatctagt cattcacaca tttaatcatt ctctcatttg tatctaataa
      661 acaaaaatga cgaagatatt ttttaaagaa gaacaaggct ttgggtcagg accactttac
      721 ctaattatgg gagtaattta tgctatcccg accatagttt ttttaattgc gttttatcag
      781 caatatgtat taaagcagcc ttggggtgat aaaccgatgt cggatactgg attattaatt
      841 acggcactag taatattagc agttcttact atttcagctt ttttgctgtt tggttcaaaa
      901 ttattagtgg aggttacaaa cgaaagtctt cattttactt tcaaaccttt tattaacaaa
      961 ccaataagct attacaagtc tgatattgaa agacatgaaa tcagagagta caaacctata
     1021 cgggagtatg gcggttgggg tataaaacaa ggactgaaaa gtatagggaa agcgtataat
     1081 gtaaaaggta atatcggttt acaactttat ctaaaaaatg ggaagagggt tcttattgga
     1141 acccaaagag gtgatgctct caatagagcg atgaagaaaa tgatggagat aaattaagta
     1201 tgattaagaa aaaggcattt gttttacggg ttcaaccaga agtacttgaa tcactggaga
     1261 aatggtcaca ggacgaattt cgtagtatca atggacagat tgaatggata ttaaacaatg
     1321 cactctcgaa ggccggaaga aagaaaaaac ccaaaagata aagttatgtt ttagatttag
     1381 ccaaaactaa aaaagtttct aatctcctat ttgttctttg tgttttattg ccgcccttaa
     1441 aaatccaata aataatggat gaggttcttt aacggtactt ttatattcag gatgaaattg
     1501 cacaccgata aaccatggat ggtttttaag ttcaatgatt tctacaagat ctttagtctg
     1561 gtttattcct gctatgcgca taccattttc ttcaaaacgt gatttgtatt cattattaaa
     1621 ttcgtaacgg tgacgatgtc tttctttaat gtcctgcttt tgatattcct tgtaggttaa
     1681 tgtgtcttta tcaatatgac aatcatataa ccctaatctc atactaccgc caaggtttga
     1741 tatatttttt tgctcttcca ttagatcaat tactggatat ggcgaatcag tatcaatttc
     1801 ggtagtatgc gcctctttta atccaagaat atttcttgta aactcaattg cagcacattg
     1861 cattcctaaa caaattccta aaaacggaat attgttttca cgtgcatatt taattgcatc
     1921 tattttccca tcaatgcctc tacccccaaa accaggggca acaagaattc catgaagtcc
     1981 gtcaagttct ttactaacat ttgaagcatt aatcttttca gattgtatgc ttacaatatt
     2041 tactttatat tcattttcag ttgcgccatg aacaagtgat tcgttgattg atttgtacgc
     2101 atccttaagt tcaacatatt ttccaattaa accaatgttt acaatgccaa tcggattttt
     2161 taatctgcta acaaatcttt cccaatttgc aagatcaagt ttattggtta tgggtgtatc
     2221 agtaaccttc aatacttcta tatcgagttt ttcatcacgc atcaatagtg gaacatcata
     2281 aatagtatca gcatcaatcg attcaataac ggatgtggtt gaaacattac aaaactgggc
     2341 tattttacct ttaatacctt cattaaggtg atactcggtt ctacacacaa ttatatcggg
     2401 ttgaactccc tgttccagca ttgtttttac cgaatgttga gttggtttcg ttttaagttc
     2461 ctctgctttt tttaaatatg gaaccagcgt aagatgtact actgcacaat tactaccaag
     2521 ctcccatttc atctgcctta cggtttcaat aaaagggaaa gactcgatat ctccaacggt
     2581 tcctcctatc tcggtaataa caaaatcgta tttgttagtt tgtcctaata tttggatact
     2641 tcttttaatc tcatcagtaa tatgtggaac cacttgaacg gttgtaccta aatactctcc
     2701 ttttctttct ttgctaatga cattttgata tatacggcct gttgttacgt tatttgcctg
     2761 tgatgttggt gtgtttgaga atctctcata atggccaagg tcgagatcag tttcagcacc
     2821 atcatctgtt acgtagcatt ctccatgttc atatggatta agcgtaccag gatcaatatt
     2881 aatatatgga tcgagttttt gtatggttac tgaaaaacct cttcctagta acaattttgc
     2941 taatgaagca gaaataattc cttttccaag ggatgatgat acacccccag tcacgaaaat
     3001 gtattttacc ttcttttcca tattctcaat gagaaattat tttattaaat tgaaagcaca
     3061 aatataataa tcgaatgtct gtctttaagt aaagactgat aaagtttttc acacgtaact
     3121 ttaaaaagtt agtaactaat tttataatag gatggttagt aatatgtagg acgtttaact
     3181 ccagccatat tttttgcaac cctaattact tgtaaagcat atccaaattc gttgtcgtac
     3241 caaacatata aaacaattcc cttcttatta ggcgacacta atgttgcatt actatcaaat
     3301 actaaggtag atggctcact tgtgaaatcg gatgagactg catcagcaga tgttgaatat
     3361 tttacttgag caaccaaatc tcctgataaa gaagtttgtc tcataatttc attaatttct
     3421 tcaacactag tttctctatt aagagttagc ttcagaacaa ctaatgaaac gtttggtgta
     3481 ggaactcgta ttgcatttcc tgttagttta ccttttaggc tcggtacaat cttactagca
     3541 gcacttgctg cgcctgtttc tgtaatcaca agattaaggg gtgcggatcg gccacgacgc
     3601 gtttttttat gcatgttatc aagcagattt tggtcgttag tatatgaatg cactgtttcg
     3661 agatgcccct gagcaattcc aaattccttt tcgataaccg ccaaaactgg tgccgcagca
     3721 tttgttgtac acgaagctgc tgagaatact gtttcttttt tataatcaac tcctttttca
     3781 tttacgccaa aaactatatt aggaatatcc cctttccctg gtgcagtaag aagaaccttc
     3841 gagattcctt ttgcattcag gtgtcgacct aatcccccac gatcacgata aatacctgta
     3901 ttatctatta atattgcatt gtttatacca tattctgtat aatcaatttc ttcaggacta
     3961 tttgctgcaa gcataagtac caaatgaccg tttatataaa tagttttttc ctctgggttt
     4021 tcaattgcaa tacctctaaa tggtccatga actgaatcgt gacgtaataa agaagctcgt
     4081 ttaacaatct gatcttcgcc atttcctctt gtaacaatag cccgaactct taactgatgt
     4141 ccgttacctt gtattattag ctctcttgcc aacaatctcc caattcgtcc aaatccgtaa
     4201 agcacaacat caacaggatg tttaaatttt ggttcaacac caatgaattt ttttaattta
     4261 attttgataa agtcatcagc atcaacgtaa tccttttttg aatcacacca ctctccatta
     4321 agtttcccta tatcaatttt tgaaggttta acattacaat gcaatatcgc ttttgctaac
     4381 tttaatgaat cttttatatt gagttgtctg ttgatgatgt tctctgcata agaatgctta
     4441 tacaaaatta aacttgcact tctatcgatt agttggcttc tgaacaatac cagttcgatc
     4501 gatttgttgt aaaacagttt tgacagtacg ctgataaact catttgcaat catttcctgc
     4561 ctcgcccatt cattgagaga gtcttcataa ctaccgttaa tgttcttttt atttaccatt
     4621 gcttagtatt ttctaattat atttaggtat ttaataaact aattagtttg tgcaaaagta
     4681 aaaaaagaag ataattgcta atacaaacta tcttctttat atacattctt aataattaag
     4741 attagtgaaa tgccgccagg ctataagaaa catctaaacg aattagtaat ttttttgtgc
     4801 tttactggcc taaataagct tttagcaaac ggcttcttgc ggtgtgtctt aacctgcgta
     4861 ttgctttctc tttaatctgt cgtactcttt cacgtgttaa atcaaatttt gcaccaatct
     4921 cttcaagtgt taaactgtaa tttctaccaa ttccata
//
LOCUS       DASCQP010000578         1835 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002076358, whole genome shotgun sequence.
ACCESSION   DASCQP010000578 DASCQP010000000
VERSION     DASCQP010000578.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1835)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1835)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1835
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002076358"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..250
                     /locus_tag="QF480_09980"
     CDS             <1..250
                     /locus_tag="QF480_09980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006798283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="pirin-like C-terminal cupin domain-containing
                     protein"
                     /protein_id="HJN06932.1"
                     /translation="GSLKIAGGNRAFAKDLTWFNNDGKYIEIEGIEDTRAILLGGEPI
                     NEKVISYGPFVMNTQSEIMQAMADYQKGAMGVLVEEFD"
     gene            319..903
                     /locus_tag="QF480_09985"
     CDS             319..903
                     /locus_tag="QF480_09985"
                     /inference="COORDINATES: protein motif:HMM:NF016176.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HJN06933.1"
                     /translation="MKKLKLLIATVLLAIISNAQVTTWGFDKSHSNVRFAVSHMVISE
                     VEGNFSIFEGSVVSSKADFSDAEITFTIDVSSIDTDSESRDEHLLNEDFFDVAKYPTI
                     DFRSKSMKNVGENKFELTGDLTMHGVTKEIILGAKYGGTIKDPWGNTKAGFKVTGTID
                     RTLWDLNYNSTMDSGGLVIGEEIDIVCNLELKKL"
     gene            937..1167
                     /locus_tag="QF480_09990"
                     /pseudo
     CDS             937..1167
                     /locus_tag="QF480_09990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010264896.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="(4Fe-4S)-binding protein"
     gene            1168..1434
                     /locus_tag="QF480_09995"
     CDS             1168..1434
                     /locus_tag="QF480_09995"
                     /inference="COORDINATES: protein motif:HMM:NF020917.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0106034 - protein maturation by [2Fe-2S]
                     cluster transfer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDGSH iron-sulfur domain-containing protein"
                     /protein_id="HJN06934.1"
                     /translation="MAVTKNRTMENSKVAGKSPMMVDLEVGINYAWCACGHSSNQPWC
                     DGSHKGSGITPVVFKLDENKKVAMCMCKQTANSPHCDGSHNNIV"
BASE COUNT          660 a          253 c          347 g          575 t
ORIGIN      
        1 tgggagttta aaaattgcag gtggaaacag ggcgtttgca aaggatctta cctggtttaa
       61 caacgatggg aagtatattg aaattgaagg gattgaagac acacgagcaa tattattggg
      121 cggtgaacca ataaacgaga aagtaatttc atatggtcca tttgtaatga atactcaaag
      181 tgaaatcatg caagcaatgg ccgattatca aaagggtgct atgggagttc tagttgagga
      241 gtttgattga ccttgttttt caaaaatata ctatcatgaa tttttaaaaa cataattata
      301 taacctaaca cataaacaat gaaaaaatta aaattattaa tagcgacagt tttattggca
      361 attatttcta atgcacaagt tactacttgg ggatttgata agtcgcattc aaatgtgcga
      421 tttgcggttt cacatatggt aatttcagaa gtggaaggca acttcagtat ttttgaagga
      481 tctgttgtaa gtagcaaagc cgacttttct gatgctgaaa ttacatttac tattgacgta
      541 agtagtattg atacagatag cgaaagccga gatgaacatc tacttaatga agactttttt
      601 gacgttgcta aatatccaac catagatttt agaagcaaat ccatgaaaaa tgtaggtgaa
      661 aacaaatttg aattgacagg tgatcttaca atgcacggcg taacaaaaga aattattttg
      721 ggtgcaaaat acggtggaac tatcaaggat ccatggggta acacaaaggc cggatttaaa
      781 gttactggaa ctattgacag aactttgtgg gacctaaatt acaactcaac tatggattcg
      841 ggggggttag tgattggtga agaaatagat atagtttgca acttagagtt gaaaaaatta
      901 tagcgtttat taaatgaaat tctaaaaaga attaatatgg ataataaaga tatagtaaaa
      961 gaatatagga caaaagaaat aactgttgtg tggaaacctg ggatatgtat acacgcagcc
     1021 aattgcctta attcattacc tcatgtttac cagccagata aaagtccttg gattatggtt
     1081 gaaaatgcaa ctaccgaaga acttatcaac caaattaaca catgtccatc aggtgcttta
     1141 tcatacaaat tatcagatga aaaagagatt gcagttacta aaaatagaac tatggaaaat
     1201 tcaaaagtag caggcaaatc acctatgatg gtggacttgg aagtgggaat aaattatgcc
     1261 tggtgtgcat gcggacactc ttcaaaccag ccttggtgtg atggctcaca taaaggaagt
     1321 ggaataacac ctgttgtctt caaattagat gaaaataaaa aagtagcaat gtgcatgtgc
     1381 aagcaaactg caaattctcc gcattgtgat ggttcacaca acaatatagt ataacatagt
     1441 acagctgtac tgcttttata tttgaactta gtattgcctt gtttattgtt gataactgca
     1501 tttactctag atttatacac ttagaatatg ttttcgttta taataagtat aagattgtta
     1561 tagaggcttt attatcatgt aatcctcaat gatctaatga taaatatgta atctcttctt
     1621 tttgtcacaa aaggtgtagt tgaagtacat agtttgtcgt ccttgccaca ggattgaaat
     1681 aaataaatat ccatttaaca ttacgctaat tccataatta gattatttat taattactga
     1741 tattcatgta catatgctat taattaattc gtaaaaatct aattccacga cttttgataa
     1801 aattatcaga ttgatatatt atgtattttt aatga
//
LOCUS       DASCQP010000579         4209 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002077226, whole genome shotgun sequence.
ACCESSION   DASCQP010000579 DASCQP010000000
VERSION     DASCQP010000579.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4209)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4209)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4209
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002077226"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(339..530)
                     /locus_tag="QF480_10000"
     CDS             complement(339..530)
                     /locus_tag="QF480_10000"
                     /inference="COORDINATES: protein motif:HMM:NF039201.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN06935.1"
                     /translation="MQSAPLINTITTNIKRNLLGQILYSNNIEATKTNIDVSNYEAGV
                     YIVNVMIEGEVVTKKLFVH"
     gene            681..1946
                     /locus_tag="QF480_10005"
     CDS             681..1946
                     /locus_tag="QF480_10005"
                     /inference="COORDINATES: protein motif:HMM:NF012428.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HJN06936.1"
                     /translation="MEGKELLSPVWTHLTEIEVVKGKGIYLFDKDGNEYIDFTSGIGV
                     VNTGHCHPNIVKRIKEQSSELLFGQMNCVISSTAIELVEKLNKVTPDYINSFFLSNSG
                     AEATEASVKLAKHATGRPNLIVMQGSFHGRTHLTMAMTTSKTVYRHRYHPHTTGIFVT
                     PTPYSYFYGWDEKTTVDFCIKQLDLLLKGQTAPDETAAIIIEPVLGEGGYVPIPKLYL
                     EHLREVCDKYGILLIMDEIQSGFGRTGKLFCFEHSNVQPDIIIMAKGLGSGLPISAIA
                     STKEIMSSWTPGTHGGTYGGGSAIPNAAACATIDTIFEENLLENCTQRGKQLMTLLKI
                     LQSKFPVMGDVRGLGLMIAVEFTDENGKPDSDTCGKVLQKCLKRNMLLLSCGTYKNVI
                     RWIPPLIVTESQIVEAVKIFEQSLSSVIV"
     gene            2271..3521
                     /locus_tag="QF480_10010"
     CDS             2271..3521
                     /locus_tag="QF480_10010"
                     /inference="COORDINATES: protein motif:HMM:NF024753.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HJN06937.1"
                     /translation="MNSKILYMWLITLLIISQTATIYSQDNNSEGWTQFRGPNRNGIS
                     TENLSPYEWSEQKPELIWKKEIGSGFSELIISDNIVYTMISEQIDSVSGSEYIAAFDE
                     SNADEIWRSKVDSIFIDLDNWGNGPSSTPTIDEEYIYSFSSFGKLTANSKKDGRLIWQ
                     VDFVKEFGSVPARWGDASSPILVDEMLIMEAGGTDSRAFIAFNKKNGTVDWAFGNGDA
                     YYNSPLLVTIDGQRQVIFTNGRTLYSFNTEGDTLWTYQMPFSNIKAMPVLIGQDKIFI
                     SGVRNPGFIIVQINNNKVNKVIDGNSMKNDYSSSCYLDGYIFGFHVAALRCISAETGE
                     VKWTKRGMGKGSLIMVDDKLLVLSDQGKLTIVDAIPDAYKEESIIQALNGKSWTAPSF
                     SNGKVYLQEPNRNGMLQVKIVINI"
     gene            3533..>4209
                     /locus_tag="QF480_10015"
     CDS             3533..>4209
                     /locus_tag="QF480_10015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06938.1"
                     /translation="MKLIVYYFFLVSFLICNFSIIQAQDVDEIIAKHIKAHGDTDKWD
                     NIRSMKITGSFTAFSVEKDFFAIKTDNGTYYSELYLGQHKVIESFDGKSGWTIDPWQD
                     FIFPRELNKSEINVFNQKADFFTPFYKYKEKGYKVELIGEQNVDGINTYVIKLTRPNG
                     HSETWYLDTNTYLEYKCESDWVDFAYDSPAESYFDDFRNVDGIVIPFFIERTFSQRDR
                     ILQIKDI"
BASE COUNT         1479 a          627 c          796 g         1307 t
ORIGIN      
        1 atagatacta gtacagctat tactgttaat ctaaacctag tgaagaatat cattgtatat
       61 atggataatt ggttaagaaa ttaatcgaaa aaattataaa tacaaaacta atactttggt
      121 agattagttt catgtgcaat aagaatattt ttaggtatca gaaaagaatt aggtattcca
      181 accttgtggg caattgatgg ttggcttcaa ctaaggaagt atatggcccg ctttatataa
      241 gaagagccgt taatccaatg gattaacggc tctttataac taaattcttt attgctagga
      301 caccaataca cgaataattc gcctactggt taatagaatt aatgaacaaa tagctttttg
      361 gttactacct caccttctat cataacattc acaatataaa cacctgcttc ataatttgaa
      421 acatctatgt tggtttttgt ggcttcaata ttgttgctgt acaatatttg accaagtaga
      481 ttccttttta tattagttgt aattgtattt attagtggag cgctctggat ttacattcca
      541 acaaaatatg taatgcaaaa gcaactaatt gaaaatttaa gaaaagaata agatgtattt
      601 gtagttctaa gcacccaagt tcgaaacaaa gttattacta acttgcacgc tgatttatca
      661 ctgaatttga aaaataaatt atggaaggga aggaattatt atcaccggtc tggacacatt
      721 taacagagat agaagtagta aaaggaaaag gcatatatct gttcgataaa gatggaaatg
      781 aatatattga ttttacatca ggtattgggg tcgttaatac tggtcattgt catccaaata
      841 ttgttaaaag aattaaggaa caatcttcag aattgctttt cggtcagatg aactgtgtaa
      901 tttcttcaac tgcgatagaa ctagttgaaa aattaaacaa agtcacaccg gattatatca
      961 atagtttttt cctctcaaac agtggcgctg aagcaacaga agcaagtgtt aaacttgcca
     1021 aacatgcaac aggaagacct aaccttattg ttatgcaagg gtcgtttcat ggcagaactc
     1081 atttaacaat ggcaatgact acctctaaaa cggtgtaccg acatcggtat catccgcaca
     1141 ctactggtat atttgttact cctacaccat actcctattt ttatggctgg gacgaaaaaa
     1201 ccacagtcga tttctgcata aaacaattgg atttgttact aaaaggacaa actgcacctg
     1261 atgaaactgc tgcaataata attgaacctg tattaggaga aggaggttat gtgccaattc
     1321 caaaactcta tctggagcac ctaagagaag tatgcgataa atatggaata ttactaatta
     1381 tggatgagat tcagagcggt tttggacgca caggtaaact tttctgcttc gaacattcaa
     1441 atgttcagcc tgatattatc attatggcaa aaggtctggg tagtggctta ccaatatctg
     1501 ctatagcttc aactaaagaa ataatgtcta gctggactcc gggcacacac ggtggaactt
     1561 atggtggtgg ttcagcaatt cccaatgcag ctgcatgtgc aactatcgat actatatttg
     1621 aagaaaacct actggaaaat tgtactcaga gaggaaaaca attaatgacc ctattgaaga
     1681 tactacaatc caaatttcct gttatgggag atgttagggg tttaggactc atgatagcag
     1741 tagaatttac agatgaaaat gggaagccag atagtgatac ctgtggaaaa gttttgcaaa
     1801 aatgtctaaa aaggaatatg ctattgttaa gttgtggtac atataaaaat gttattcgct
     1861 ggataccacc attgattgtc acagaatccc aaatagtaga agctgttaaa atatttgaac
     1921 aatcgcttag ttctgttatt gtataatttc caattagagt atattaattg cggtaatatt
     1981 tgacttgatt ctctattatt tagagcaaaa ccacctcagt taaccctatc tgacacacgc
     2041 attcatcgat taaaaatgct tgttggtagt ataacaagta ttgtatgttg aaaaaacaaa
     2101 agtcataaca tctttttact atttttatga ccaatttttg aacaatgaaa gtaatgctca
     2161 ttttgatgag aagtttgctc tcaaaagatt aaaaaaccaa gtacaataag gaaatacgaa
     2221 aacactagag atgatgtaaa agcgtatttt attaatgaaa aaaactaatt atgaatagta
     2281 aaatacttta tatgtggttg attacattat tgataatcag ccaaacagca acaatatact
     2341 cacaggataa taattctgaa gggtggacac aatttcgagg cccaaatcga aatgggattt
     2401 caactgagaa tttatcacca tatgagtggt cagaacaaaa gcccgaactc atttggaaaa
     2461 aagaaattgg ttccggtttt tcggaattaa ttatttccga taacattgtt tataccatga
     2521 ttagtgaaca aattgatagc gtgtcgggat ctgaatatat tgcagcgttt gatgaaagta
     2581 atgcagacga aatttggaga tcaaaagttg attcaatttt cattgattta gataactggg
     2641 gtaacggtcc cagttcaact cctacaatag atgaagaata tatttacagc tttagtagct
     2701 ttggaaagct gactgctaat tcaaaaaaag atggaagatt aatttggcaa gttgattttg
     2761 ttaaagaatt cggaagcgtt ccagcacgat ggggtgatgc atcttctcca atacttgttg
     2821 atgagatgct aattatggaa gcagggggca cagattctag agcatttatt gcttttaaca
     2881 aaaaaaatgg aactgttgat tgggcatttg gaaatgggga tgcatattac aattcaccat
     2941 tattagttac gattgatggt cagaggcaag ttatttttac gaatggaagg actttatact
     3001 cgtttaatac agaaggtgat actttgtgga cctatcaaat gccattcagt aacattaagg
     3061 caatgcctgt tctgataggg caagacaaga tatttatttc tggagttcga aatccaggtt
     3121 tcataattgt acaaatcaat aacaacaaag ttaataaggt aattgacgga aacagtatga
     3181 aaaatgatta tagttcaagt tgttatctgg atggatatat ttttggattt catgtagctg
     3241 cattacggtg cataagtgcc gaaaccggag aagtgaaatg gacaaaaaga ggcatgggaa
     3301 aaggaagcct gataatggta gatgataagc tacttgtgct ctccgatcag ggaaaattaa
     3361 ctattgttga tgcaattcct gatgcatata aagaagaatc aataattcag gcccttaatg
     3421 gaaaatcatg gactgctcct tcattttcta acggaaaagt atacctccag gaacctaacc
     3481 gaaatggcat gttacaagtt aaaatagtta ttaatattta aaccggatta tcatgaaatt
     3541 aatagtttat tactttttcc ttgtaagctt tttaatatgt aatttttcaa ttatacaggc
     3601 tcaggatgta gatgaaataa ttgcaaagca tattaaagct catggagata cagataagtg
     3661 ggataatatt aggtcgatga aaattactgg cagctttaca gcatttagcg ttgaaaaaga
     3721 tttttttgcc ataaaaacag ataacggtac ttactatagt gaactttatc ttggacaaca
     3781 taaagtgatt gaatcgtttg atggaaaatc aggatggact attgatccct ggcaagattt
     3841 tatttttccc agagagctaa ataaatcaga gattaatgtg tttaatcaga aggccgattt
     3901 ttttacacct ttctataaat ataaagaaaa gggctacaaa gtagaactga ttggcgaaca
     3961 aaatgttgat ggcattaaca catatgttat taaacttaca agacccaatg gccattccga
     4021 aacatggtat cttgatacta atacatatct agaatataag tgcgaatctg attgggttga
     4081 ttttgcgtat gatagtcctg ctgagtcata tttcgacgat ttcagaaatg tagatggcat
     4141 cgttattcct ttctttatag aaagaacatt tagtcaacgt gacagaatct tacagattaa
     4201 agatattga
//
LOCUS       DASCQP010000580         1851 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002079400, whole genome shotgun sequence.
ACCESSION   DASCQP010000580 DASCQP010000000
VERSION     DASCQP010000580.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1851)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1851)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1851
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002079400"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1007)
                     /locus_tag="QF480_10020"
     CDS             complement(<1..1007)
                     /locus_tag="QF480_10020"
                     /inference="COORDINATES: protein motif:HMM:NF013927.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0017000 - antibiotic biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin acylase family protein"
                     /protein_id="HJN06939.1"
                     /translation="MKIIKKIFVTIIIILICFGAASYLLLRSTKPNYSGKVSLPGLNK
                     KVEIIIDEYGVPHIYAENSHDAYMALGYVQAQERLFQMEMIRRVTSGRLSELLGEKFL
                     NTDKTMLTLSIREAAKKSANKFFNETSAPYKQETLAYLKGINSFIENGTLPIEFTLLN
                     FKPELFKPVDVYTVLGYMSLSFTSALSQEPIVTRILENLGQDYLIDFGLDSISNVQHY
                     LDTTSQTKHLGNLSSEIQKTFNTLPVPVWYGSNNWVLSGIRSKSGKVLLANDTHIRFS
                     QPAVWYEAYIEYPGFSMAGYYLAGVPFAITGHNDRFAWGTTIFPFDNMDLYREKQNPD
                     NP"
     gene            1209..1394
                     /locus_tag="QF480_10025"
     CDS             1209..1394
                     /locus_tag="QF480_10025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06940.1"
                     /translation="MENNKEKVCLFCKNDEYQVPLVALDFKGSNYWICPQHIPVLIHD
                     PSQLEGMLPGAEDLSAG"
     gene            1688..>1851
                     /locus_tag="QF480_10030"
     CDS             1688..>1851
                     /locus_tag="QF480_10030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009318078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /protein_id="HJN06941.1"
                     /translation="MEKITVIGAGNVGATVANVIAHKDIVKEVVIIDIKEGIAEGKAL
                     DIWQTAPING"
BASE COUNT          623 a          291 c          307 g          630 t
ORIGIN      
        1 ggattatcag gattctgttt ttctctataa agatccatat tgtcgaatgg aaatattgtt
       61 gtaccccaag caaagcgatc gttatgacca gtaattgcaa aaggaacacc tgccaaataa
      121 taacctgcca tcgaaaatcc gggatattca atatatgctt cataccatac ggctggttgt
      181 gaaaacctga tatgtgtatc atttgccagt agtacttttc ctgattttga tctaatgcca
      241 ctaagcaccc agttgtttga tccataccaa acaggaacag gtaaagtatt aaaggttttt
      301 tgtatctcac ttgacaggtt gcctaaatgt tttgtttgac tggtagtatc aagataatgt
      361 tggacgtttg agatagaatc aagcccaaaa tcaattagat aatcctgtcc aagattttct
      421 agtatacgag ttactattgg ttcctgtgaa agagcagatg tgaaagacaa agacatataa
      481 cctaataccg tgtaaacatc aacaggttta aatagttcgg gtttgaaatt caacaaagta
      541 aactcaattg gcagggtgcc attttcgata aaactgttta ttccttttag ataagcaaga
      601 gtttcctgtt tgtatggtgc actagtttca ttaaaaaatt tatttgcact ttttttggcc
      661 gcttcacgta tggacagcgt tagcattgtt ttatcagtgt ttagaaattt ctcgcctaat
      721 aattccgata atcttcctga agttacacgt cttatcattt ccatttgaaa taacctctct
      781 tgtgcctgga cataaccaag agccatatat gcgtcgtgtg aattttcagc ataaatatgt
      841 ggaacaccat attcgtcaat aattatttct acttttttat tcagacctgg cagacttact
      901 ttacctgaat aatttggttt ggtggatctt agcaataaat aactcgctgc accaaagcat
      961 atcaaaatga taattattgt tacaaatatt tttttgatga ttttcattgt ttaaccaagt
     1021 taattgcttt accctttgat acgtagatat gaaagtatca tgggataact gtttctattt
     1081 taaaaattac aaacaagcta tgcaaaatta cgaattctat ttttataata aatgatctat
     1141 tgtttaacat atcagattat ttaggatatt tgccgcttaa attatttaat atcaaaaaaa
     1201 gaaaaattat ggaaaacaat aaagaaaaag tttgcttatt ctgcaaaaat gatgaatacc
     1261 aggttccatt agtagcgctt gattttaaag gttctaacta ctggatatgt ccacagcata
     1321 taccagtact tattcatgat ccatcgcaat tggaaggtat gttacctgga gctgaagatt
     1381 tatctgcagg ttaagaaaac tagaaccttc ggtttttcat aatcgttaat taggctcttg
     1441 aacattgaaa gatctttaca gtttataaat ttaggatatc ttgagaataa tcattttttg
     1501 gaatcttaaa caatgggtaa tcctaatctt agcatcttca aacctttaat taattctgtt
     1561 aacaatttag actttaaata aattagcttt tacatatttt tatagtcaat attagcattg
     1621 ctcacggaga aatattatta catttgcggt aatgaaaaaa gtctaacata aaaagaatca
     1681 aattaaaatg gaaaagataa cagtaattgg agcaggaaat gtaggagcca cagtggctaa
     1741 tgttattgct cacaaagata ttgttaaaga agttgttatt atcgatatca aagaaggtat
     1801 cgcagaaggt aaagctcttg atatttggca aactgcccca atcaatggct a
//
LOCUS       DASCQP010000581         1553 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002080066, whole genome shotgun sequence.
ACCESSION   DASCQP010000581 DASCQP010000000
VERSION     DASCQP010000581.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1553)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1553)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1553
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002080066"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(145..1233)
                     /locus_tag="QF480_10035"
     CDS             complement(145..1233)
                     /locus_tag="QF480_10035"
                     /inference="COORDINATES: protein motif:HMM:NF012695.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HJN06942.1"
                     /translation="MEIKETNLGRGRFQVSFWRKLLVSPSNTLMESIKILHEGDCRIA
                     LVVDRESRLIGTITDGDIRRALISNVSMGDLITSVMNKNPVTASIELNEREVRALMED
                     DGLLHMPILDKYGVLCDLVTFQRLHKTPAYDNPVVIMAGGFGTRLYPLTKEIPKPLLT
                     VGDKPILDTILEQFTIHGFSNFYISTHHMPEKIRNYFFDKDLGNMKIEFIHEDQPLGT
                     AGSLGLLPTNISKLPIIVMNGDLLTKVDFGHLLEFHQQNKADATMCVRQYEFQVPYGV
                     IEIEGHKIKKIKEKPMHKCFVNAGIYVLNHELIQKVNDSAPLDMTDLLESQLAAGKIN
                     AFPVHEYWLDIGQINEYNKANKDIDTIF"
     gene            complement(1188..>1553)
                     /locus_tag="QF480_10040"
     CDS             complement(1188..>1553)
                     /locus_tag="QF480_10040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06943.1"
                     /translation="DFMPNDHRTEGSYSKYSSLDDKIDWLHYHTTTIKFGIGRATYDS
                     AQEIRNNDITRAEGVALIKRFDGEFPKQYIEDCCKYMDITLQQYHDAIEKFRSPHLWH
                     KINGAWKLKKPIWEEGDFK"
BASE COUNT          465 a          319 c          249 g          520 t
ORIGIN      
        1 gaacgatgga tcagggaata caacactgag cgaccacacc agtcactcgg agatctgtcg
       61 ccaatactgt ttttacaaca gagagggttc ggccaatttt ctatttatgc gctgtagaaa
      121 gatgggggtg ttgacaatac tgggctaaaa tattgtgtca atatctttat tagctttatt
      181 atattcattg atctgcccaa tatcaagcca atattcgtgg acagggaaag catttatttt
      241 acccgcagcc aattgactct ctaaaagatc tgtcatatcc agaggtgcac tgtcattaac
      301 tttttgaatg agttcgtgat tcaaaacata aataccggca tttacaaaac acttatgcat
      361 tggtttttct ttaatctttt taattttatg accttcaatt tcaataacac cataaggcac
      421 ctgaaactcg tattgtctaa cacacattgt tgcgtcagct ttattttgtt gatgaaattc
      481 taataaatga ccaaaatcca cttttgttag aaggtctcca ttcattacta ttattggaag
      541 tttcgagata tttgttggta acaaccctag ggatccggca gttccaagcg gctgatcctc
      601 atgtataaac tcaatcttca tattacctaa atctttatca aaaaaataat ttctaatttt
      661 ttcgggcata tggtgggtgg aaatataaaa attactaaat ccatggatag taaactgttc
      721 aaggatggta tccaaaatag gtttatcacc aactgttaac aaaggtttgg gaatttcttt
      781 tgttaatgga tataaccttg ttccaaaacc acctgccata ataactaccg gattatcata
      841 tgctggcgtt ttatgtaacc gctgaaacgt taccaagtcg cataacacgc cgtatttatc
      901 taaaattggc atgtgcagta aaccatcatc ctccattaac gcacggacct ctctttcgtt
      961 tagctcgatg cttgctgtta ctggattttt attcataacc gaagtaatca agtcacccat
     1021 agaaacatta ctaatcaatg ccctcctgat atcgccatca gtaattgttc ctattaacct
     1081 tgattcacga tcaacaacaa gtgcaattct acagtctcct tcgtgtaaaa ttttaataga
     1141 ctccattagc gtattagagg ggctgactaa taattttctc caaaagctca cttgaaatcg
     1201 ccctcttccc aaattggttt ctttaatttc catgcaccat taatcttatg ccataaatgt
     1261 ggtgatctaa acttctcaat tgcatcatga tattgctgta atgtgatatc catatattta
     1321 caacaatctt caatgtattg cttcggaaac tccccatcga accttttaat taatgccact
     1381 ccttctgctc tggtaatatc gttattccta atttcttgtg cagaatcata ggtcgctcta
     1441 ccaatgccaa attttatagt tgtggtgtga taatgaagcc aatcaatctt atcatccaaa
     1501 gagctgtatt tactataact gccttcggtt cgatgatcgt ttggcatgaa atc
//
LOCUS       DASCQP010000582         2526 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002080089, whole genome shotgun sequence.
ACCESSION   DASCQP010000582 DASCQP010000000
VERSION     DASCQP010000582.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2526)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2526)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2526
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002080089"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            305..1429
                     /locus_tag="QF480_10045"
     CDS             305..1429
                     /locus_tag="QF480_10045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06944.1"
                     /translation="MKVILAFNRPEDSLKLQAAYFLIKNLENNYTLRMSLRDSSDTLI
                     DINPSEFKDYVSIKRHFDSIEMNSQKVSYKTDTILLDIENVNSEFIIKHINNTYNTWQ
                     KSTWDNKYNFNEFCDFILPYRVANEDVGSYSNHFSEKYAHIIRRNLNIIETAILINKE
                     INNEISRDDRLVINPNAQLISTTEKNHTGSLRDINIYKVTALRSIGIAAVMDYTPYFA
                     DSILGYYSTTIILPNNKKLILSTSDNKQLDYPQGKVAKVYRRSHNYDPNSLFSIKEKE
                     IHTPPFLGDYNYLDVTDEYIKTADVTVDFDDTSQFVYLAVFNENKWKPVEWSQVDNEN
                     KASFKNMGTDVFYRLVVVSEEEILPIGHAFYLNSNGSKSR"
     gene            complement(1442..1639)
                     /locus_tag="QF480_10050"
     CDS             complement(1442..1639)
                     /locus_tag="QF480_10050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06945.1"
                     /translation="MGRPSTRPGKLRDGFYIEVRSKGSKTGIKLRSDTLDEMKQAALH
                     YGKTKEVTVLGEYKNGKPVKK"
     gene            complement(1721..>2526)
                     /locus_tag="QF480_10055"
     CDS             complement(1721..>2526)
                     /locus_tag="QF480_10055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06946.1"
                     /translation="GNINLLVDFNSLFWEPSSRKMSVYGIVGIGYSTWNSKLVDSLTG
                     TIMDSGYTIGTNTYKKGGFVVPVGLGINYMLNNNWALNIEMNLRMVLNDDVDVWRDGF
                     KYDQVLYTSFGISYFINRRSSGNRKRLEKKAYITEPVEPVPLYDYNVQDGGNKKSNKS
                     ESEVILIESPIEKKIETPSGIRYRVQILAKRNKLPSFQYLRDRYNIQGNIYENYQNGV
                     YRYSTGDFNSYRDALRHSYLMRDKGITEAFVVAYKNDKRITISKVMKQN"
BASE COUNT          849 a          435 c          374 g          868 t
ORIGIN      
        1 gtgaagataa ttgacaaaat agataactgg gttgagatta aaatacaaaa tggaagtgtt
       61 ggttggcttc ctgaaaagtc aattaaacct atatagataa acttatcttt gaaactattt
      121 tatagtctct gagtataatc taatccacca attagaactg gttttgcgtt tacaaaaata
      181 ttttctacta atactattca tgttagcact aatggttgtt agctgtctga aaaagaaggc
      241 cccgggtatc cccaccgaag ttcagaaaag tcttaacaaa tcaagcatat gtaaaccgga
      301 cttaatgaaa gtgatacttg cgtttaacag acctgaagat tctctaaaac ttcaagcagc
      361 ttatttccta atcaaaaatc ttgagaataa ttatactctc cgaatgtcat taagggattc
      421 ttctgacact ttgattgata ttaatccatc ggaatttaaa gattatgtgt ccattaaaag
      481 gcactttgat tctatcgaaa tgaattccca aaaagttagt tacaaaacag atacaatatt
      541 gttggatatt gagaatgtaa actctgaatt tataattaaa cacattaata atacatacaa
      601 cacctggcaa aaaagcacat gggacaataa gtataatttt aacgagttct gcgattttat
      661 actaccatac cgtgttgcaa atgaagatgt tggatcttac tcaaatcatt ttagcgagaa
      721 atatgcacat attattagga gaaatcttaa tattattgag actgcaattc tgataaataa
      781 agaaataaat aatgaaatat cgcgtgatga caggttggtt ataaatccta atgcgcagct
      841 catctcgaca acagaaaaaa accatactgg gagtctcaga gatataaata tatataaagt
      901 aactgccctc aggagtattg gtatagcagc tgtaatggat tatactcctt atttcgcgga
      961 ttcaatatta ggttattatt ctactactat tattcttcca aacaataaaa aactaattct
     1021 tagtacctca gataacaaac agttagatta tcctcagggt aaagttgcca aagtataccg
     1081 ccgatcgcat aattatgatc ctaatagtct tttctcaatt aaagagaaag aaatacatac
     1141 acctccattc ttaggcgact acaattattt agatgttaca gatgaatata ttaaaactgc
     1201 tgatgtgaca gttgattttg atgatacatc acaatttgtt tacctcgcag tatttaatga
     1261 aaacaagtgg aaaccagttg agtggtcgca agtggataat gaaaacaaag caagttttaa
     1321 gaatatggga acagatgtat tttataggtt agtagttgtt tctgaggaag aaattttacc
     1381 tattggacat gcattttatt taaatagtaa tggtagtaag agtcgctaaa atggcatctt
     1441 gttacttttt aacaggtttg ccatttttat attccccaag gactgttact tcctttgttt
     1501 taccataatg taatgcagct tgcttcattt catcaagcgt atctgatcta agtttaatac
     1561 cagttttact acctttactt cttacttcta tgtagaaacc gtctcttaat ttacctggtc
     1621 ttgttgaagg tcgtcccata atatttttta atttttttta tcaaatatat ttcctaattg
     1681 caattcttat taacgcttca gtatcttata tattattcaa tcaattttgt ttcataactt
     1741 ttgatatggt aatccgtttg tcgtttttat aggccaccac aaaagcctct gtaatccctt
     1801 tatccctcat tagataacta tgccgcagag catccctgta tgagttaaaa tctccagttg
     1861 aataccgata aacaccattc tgataatttt cataaatatt accttgaata ttgtacctat
     1921 ctcttaaata ttgaaatgaa ggtagcttgt tgcgtttagc aagtatttgt acacggtatc
     1981 taatacctga aggtgtttca atctttttct caattggtga ctcgatgagt attacttcag
     2041 attcactttt gtttgatttt ttattgcctc cgtcttgtac attgtaatcg tataaaggaa
     2101 ctggttcaac cggttcagta atatatgctt ttttttctag tcgcttacga ttgcctgatg
     2161 atcggcggtt aataaaatat gatatcccaa atgaagtgta caaaacctga tcatacttaa
     2221 agccatcacg ccaaacatca acatcatcat ttagtaccat tcttaaattc atttcaatgt
     2281 ttaaagccca attattattt aacatataat taattcctaa acctacagga acaacaaatc
     2341 ctcctttttt atatgtattg gtaccgatcg tataaccact atccattatc gtacctgtta
     2401 acgaatcaac taacttactg ttccaggtgg aatacccaat tcctactata ccatatactg
     2461 acatctttct agaacttggt tcccaaaata aactattaaa atcaacaagc agattaatat
     2521 ttccat
//
LOCUS       DASCQP010000583         1688 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002087213, whole genome shotgun sequence.
ACCESSION   DASCQP010000583 DASCQP010000000
VERSION     DASCQP010000583.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1688)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1688)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1688
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002087213"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..484
                     /locus_tag="QF480_10060"
     CDS             <1..484
                     /locus_tag="QF480_10060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06947.1"
                     /translation="DFGTGPALIKGNSGDWESYPNYHHRFFDEIEKTYGLFDDLFMND
                     ITTPMDEVLEGQSKKKDIWKPLRNNYKDHKNFVRACSNKVDGLRILQFLRKQQATIEI
                     CDEEIIYDYLVCYCNDEIDDNLLSELEEFSYASSSVELLNKLRNFLFHKEMELRKKSI
                     "
     gene            481..1392
                     /gene="miaA"
                     /locus_tag="QF480_10065"
     CDS             481..1392
                     /gene="miaA"
                     /locus_tag="QF480_10065"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009122526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0052381 - tRNA dimethylallyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HJN06948.1"
                     /translation="MNHLITILGPTATGKTVVAANLAALIKGEIISADSRQIYRGMDI
                     GAGKDLNDYIVDGKSIPFHLIDIAEPGSRYNVFEFIGDFTKAFNKVVESGNIPILCGG
                     TGMYLDAVLRGYNMGKVQVNDELRKQLDALTEDELIYKLRSFGSLHNTSDTSDKKRLI
                     RAIEIADYQNKHKELSLKLPKFKQINFGITYERQIIRSRITERLESRLKEGLIQEVET
                     LLENGITPDNLIYYGLEYKFVTMFVVGQLSYNDMLTKLNTAIHQFAKRQMTWFRRMEK
                     KGVKIHWIDGGIDLKDKLAVILSKINL"
     gene            complement(1436..>1688)
                     /locus_tag="QF480_10070"
     CDS             complement(1436..>1688)
                     /locus_tag="QF480_10070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002559554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HJN06949.1"
                     /translation="RKIDIEGFFVAVGHKPNTELFSGILDMDEVGYLITKPDSTSTNV
                     PGIFAAGDVQDKHFRQAITAAGTGCMAAMESERFLGEQL"
BASE COUNT          590 a          243 c          327 g          528 t
ORIGIN      
        1 tgattttggt accggccctg cacttataaa aggcaattct ggggactggg agtcttatcc
       61 aaattatcat catagatttt ttgatgagat agaaaaaacc tatgggttat ttgatgatct
      121 gtttatgaat gatattacaa cacctatgga tgaggtttta gaaggccaat ccaaaaagaa
      181 agatatttgg aagccacttc gaaataatta taaagatcat aaaaactttg tacgcgcgtg
      241 ttcaaataag gttgatggtt tacgtatatt gcaatttctg cgaaagcaac aagcaaccat
      301 tgaaatatgt gatgaagaaa taatttatga ttacttagtc tgttattgta atgatgaaat
      361 tgacgataat ctattgagtg aacttgaaga gtttagttat gccagttcat cggttgaact
      421 tttgaataag cttcgaaatt ttttgtttca taaagaaatg gaattgagaa aaaagagtat
      481 atgaatcatc ttataacaat tcttggtcca actgcaactg gtaaaacagt agtagcggct
      541 aaccttgcag cattaattaa aggtgagata ataagtgctg attcaaggca aatatatcga
      601 ggaatggata taggtgctgg aaaagatctg aatgattata ttgttgatgg taaatctatt
      661 ccattccatt taattgatat tgccgagcca ggatcacgtt ataatgtttt tgaattcatt
      721 ggcgacttta caaaagcatt taacaaggta gttgaatctg gaaatattcc aatattatgt
      781 ggtggtaccg gtatgtatct tgatgctgtt ctcagaggat acaacatggg taaggtgcaa
      841 gttaatgatg agttgaggaa acaattagat gcactgactg aagatgagct tatttataaa
      901 ttaaggtcat ttggatcttt gcacaatact tcagatacat ctgacaagaa aagactcatc
      961 cgtgccattg aaattgctga ttatcaaaat aagcataagg aattgtcact taaactgccc
     1021 aagtttaagc aaattaattt tgggataact tatgaaagac agattattcg ttcaagaatt
     1081 actgaaaggc tagaatcaag attaaaagag ggattaattc aggaagtaga aactctattg
     1141 gaaaatggaa taacacctga taacttaatt tattacggtc tcgaatataa atttgtcacg
     1201 atgtttgtag ttgggcaatt atcttataat gatatgttaa caaaactaaa tactgcgatt
     1261 catcagtttg caaaaaggca gatgacttgg tttagacgca tggaaaagaa aggtgtaaaa
     1321 atacactgga tagatggagg aattgattta aaggataaat tagcagtaat tttgagtaag
     1381 attaatttgt aattcacaaa atcctccaga tgctattcag agaatagtat ataatctata
     1441 attgctcacc aagaaatctt tcagattcca ttgcggccat acatccagtt cctgccgcag
     1501 tgatagcttg acgaaaatgt ttatcctgaa catcgcctgc agcaaaaatt cccggtacat
     1561 tggtcgaagt tgagtcaggt tttgtaatca gataaccaac ctcatccata tctaatattc
     1621 cactaaacag ttctgtgtta ggcttatgtc cgacagcaac aaaaaaacct tcaatatcta
     1681 tttttcgt
//
LOCUS       DASCQP010000584         5899 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002091933, whole genome shotgun sequence.
ACCESSION   DASCQP010000584 DASCQP010000000
VERSION     DASCQP010000584.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 5899)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5899)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5899
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002091933"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..260)
                     /locus_tag="QF480_10075"
     CDS             complement(<1..260)
                     /locus_tag="QF480_10075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase S41"
                     /protein_id="HJN06950.1"
                     /translation="MTNKLYIKILMLIIVVFSFSKLWSQDQNNFELSKNLEIYADILR
                     QLNLNYADDIKPGELSTTAIDAMLAKLDPYTVYVPESRREDF"
     gene            complement(273..494)
                     /gene="yidD"
                     /locus_tag="QF480_10080"
     CDS             complement(273..494)
                     /gene="yidD"
                     /locus_tag="QF480_10080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013445691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HJN06951.1"
                     /translation="MRRVIGSLFIFIIRIYQYTLSPFIGRSCRYTPSCSNYSVDAVTK
                     HGPLKGGWLSIKRIASCNPWGGSGYDPVP"
     gene            complement(475..870)
                     /locus_tag="QF480_10085"
     CDS             complement(475..870)
                     /locus_tag="QF480_10085"
                     /inference="COORDINATES: protein motif:HMM:NF013022.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0004526 - ribonuclease P activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HJN06952.1"
                     /translation="MRNTFKKAERLNSKLLISKLFTNGSSFFLHPFNVTFLETERNGG
                     PPVQIMISVSKRNFASSVSRNQIKRLIRETYRKNKYIVWDDFKDKPQTQLLIGIVYLA
                     KTIETYSEIERKLILILHRLIDKDEASNR"
     gene            complement(893..1033)
                     /locus_tag="QF480_10090"
     CDS             complement(893..1033)
                     /locus_tag="QF480_10090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06953.1"
                     /translation="MDAKVEVINDFEVGINFYYNYDNKPVSSDASTNDYGITTTISYS
                     FH"
     gene            complement(1118..1927)
                     /locus_tag="QF480_10095"
     CDS             complement(1118..1927)
                     /locus_tag="QF480_10095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06954.1"
                     /translation="MIGTFNKAIITTIIFLIGLSSFAQKTDTIIHVNGNVLLGEIKKL
                     DNGIITFKMDGMGTIKFQLDKVYTFSSEKHFQVIMRQGIQYYGTFDTSGISRRVKIRL
                     LNGTESLKVEDIIEMYPIKKNFWLRTSGTFSLGFNFSKGSDIASITSSGKIDYRNRKT
                     FTQLNWSDNTTVQSDTLNSNKTDVSFDIQKLLKKRWYIGFNAEGSSNSELGYDLRLLV
                     GTSIINYLIQNYHNRMYASIGASGNREWASGSEDPSDNLEGLIGLNYHYFK"
     gene            2095..3381
                     /locus_tag="QF480_10100"
     CDS             2095..3381
                     /locus_tag="QF480_10100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006842442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJN06955.1"
                     /translation="MNQKPRLSFWQIWNMSFGFLGIQFGFALQNANASSILLTFGADI
                     HQLSWFWLVAPITGMIVQPIVGFFSDRTWNKLGRRRPYFLAGAILTSTALILMPNAPH
                     FANAIAPMFIGGGMLMIMDASMNISMEPFRALVADKLPEEQHALGFSMQTLLIGIGAV
                     VGSWLPYMLGNWFGISKEATHGLVPDNVTYSFYFGAFVLISSIIWTVISTQEYPPEYY
                     DEEKDGEIVKEKFRIPSKMWQLLIVQFFSWFALFSMWVYTTPTVALHFFGTSDPNSAD
                     FKEAANWVGILFGVYNGISAIIALSLPKVAAKIGRRNTHAIALTLGGLSFLSFSVISN
                     YQLLMIPMIGIGIAWGSILAMPYAMLANSLPPKKMGMFMGLFNMSITIPQIINGIFGG
                     LILKYAFGGDPLLSIYLAGVLMIFGAISTFFVKDKL"
     gene            3402..>5899
                     /locus_tag="QF480_10105"
     CDS             3402..>5899
                     /locus_tag="QF480_10105"
                     /inference="COORDINATES: protein motif:HMM:NF015588.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-phosphoglucomutase family hydrolase"
                     /protein_id="HJN06956.1"
                     /translation="MNAFEAVIFDLDGVITKTATTHSRAWKKMFDHYLHDRCSNLNET
                     FNAFTPSDYLNYVDGKPRYDGVKSFLESRNINLPFGNPEDDVEVETICGLGNRKNKVF
                     NEVLMKEGVEVFPSTIKLMEQLKKDDIRIGVASSSKNCKAVLEAADLMHFVETRVDGV
                     IAAKMGLNGKPSPDIFLTAAKNLGVDINKTIVVEDAVSGVQAGKNGNFGLVLGLAREE
                     NKEALKANGADIVLNDLEEITISEINSWFIKGIENDNWELCYYDYDPRKEKSREALLT
                     VGNGYFGTRGAMEETSSSETNYPGTYIAGLYNRLKTKIAGREIENEDFVVVPNWLPIN
                     FKIDDEPWFDPNACKIEQIARKLDFRNGLLTRKMIVTDHNGYKTQIESQRIASMSNPH
                     EAAIKYSVTPLNYSGRISFSSHLDGTVKNEGVDRYKDLNSLHLKFVEQGGKGATTWLK
                     VRTSQSEIEIVEAAKIRLISKNDNIDYDFGICYNDGIPYTFSDQKVEVNSTVTLEKLI
                     TIYDSNNNGKDLLQKALDELTTMPSFDKVLKESSLAWDAIWKKADIKLIGDRISQKML
                     RLHIYHMMISASPNNKTIDAGITARGLHGEAYRGHIFWDELFILPYYDIHFPKTAKSV
                     LMYRYRRIDKAREYALKHGYKGAMFPWQSGSDGREETQILHLNPITGIWGEDFSSLQR
                     HVSLAIAYNIWQYFHITNDLEFIEDYGAEIYLEICRFWESKSIFNKKTGRYNIEKVMG
                     PDEFHESYPGAKVGGIRDNAYTNIMVAWLFSKVQHFIGVMTAGGREKLFNKINLQENE
                     LVNWLDIESKLNLVINKQVIIAQYDGYFELKELD"
BASE COUNT         1972 a          970 c         1056 g         1901 t
ORIGIN      
        1 tcaaaatcct cacgtcttga ttcaggcaca taaactgtat atggatcaag tttagcaagc
       61 atagcatcaa ttgctgtagt acttaattca ccaggtttaa tatcgtcagc ataattaagg
      121 ttcaactgac gcaatatatc agcataaatt tcaagattct ttgataattc aaaattattt
      181 tgatcctgcg accacaattt tgaaaagcta aaaactacaa ttattagcat caaaatcttt
      241 atatataatt tatttgtcat aactaatttg ttttatggaa ccggatcata tccactcccc
      301 ccccatggat tacatgaagc aatacgctta atggaaagcc atccaccttt taatggtcca
      361 tgctttgtaa cagcatcaac actataattt gagcatgatg gagtatatct acacgaccgt
      421 ccgataaaag gcgaaagtgt atattggtat attcgtatta taaaaataaa taagctacct
      481 attactcgcc tcatccttgt caattaagcg gtgcaaaatt agaattaatt ttcgttctat
      541 ctcagaataa gtttcaatag ttttagccag gtatacaatg cctattaata gctgagtctg
      601 cggtttgtct ttaaaatcgt cccatactat atatttattc ttacgataag tttccctgat
      661 taatcgctta atttggtttc tacttacaga tgaagcaaaa tttcttttag agaccgaaat
      721 cataatctgt acaggaggtc ctccatttct ctccgtttca agaaatgtaa cattaaatgg
      781 atgtagaaag aatgagctac cgttagtaaa taatttacta atcagcagtt tactattcaa
      841 tcgctctgct tttttaaaag tattcctcaa gataatttaa tcatagttta tattaatgaa
      901 atgaataact aattgttgta gttattccat aatcattggt tgatgcatca ctcgatacag
      961 gcttattatc ataattgtaa taaaaattaa tcccaacttc aaaatcattt ataacttcaa
     1021 cttttgcatc caaataataa tttaccctcc atctcccagc ggttgttaag ttggggtaag
     1081 tattgatata ggtagaaata ttgatctcag gatcagtcta tttaaaataa tgataattta
     1141 atcctattaa accctcaagg ttgtcacttg gatcttcact accagaagcc cactctctat
     1201 ttccactagc accaatcgat gcatacattc tattgtgata attctgaatt aaataattga
     1261 taattgaagt accaacaagc aatctcaaat catatcctaa ttcactatta gaactacctt
     1321 cagcattaaa accaatatac catctctttt tcagcaattt ctgtatatca aatgaaacat
     1381 ctgttttatt tgaattcaag gtatcggatt gaactgtagt attatcactc cagttcagtt
     1441 gtgtaaaagt ttttctattc ctataatcaa tcttacctga agaggttatg cttgcaatat
     1501 cacttccttt ggagaaatta aaacccaaac taaatgtacc actggttctc agccaaaaat
     1561 tctttttgat tggatacatt tcaatgatat cttcaacttt caatgattca gtgccattaa
     1621 gtagtctaat ctttactcta cgactaatgc cagaagtatc aaatgtgcca taatattgta
     1681 ttccttgccg cattataacc tgaaaatgct tttcagaact gaatgtataa accttatcga
     1741 gctgaaactt aatagttccc attccatcca ttttaaacgt aataatacca ttgtcaagtt
     1801 ttttaatttc tcctagcagt acattaccgt ttacatggat tattgtatca gttttttgtg
     1861 cgaaagatga caaccctatc aaaaatatga tggtggttat aattgctttg ttaaaagttc
     1921 ctatcataaa agtttcaatc ttttgcaaag ataaaaaaga ataccgcaaa cgttttagtt
     1981 aataacaatg atgttgggac ttaagtaatt gtaaaattat aattctgtta gtaagtgaat
     2041 ttcatattta atattcagaa tagtattatt ttcgatgcca ataaaatgac tcttatgaat
     2101 cagaaaccac gattaagttt ttggcagata tggaacatga gttttggatt cctcggcatt
     2161 caatttgggt ttgcactaca aaatgcaaat gcctctagca ttctattaac ttttggtgcc
     2221 gatatacatc aacttagctg gttttggtta gtagcaccaa ttacaggaat gattgttcaa
     2281 ccaattgttg gcttttttag cgatcggaca tggaacaaat tgggcagaag acgtccttat
     2341 tttcttgccg gagcaatatt aacaagcact gcacttattc ttatgccaaa tgctccacac
     2401 tttgcaaatg caatagctcc tatgtttatc ggtggtggaa tgctcatgat catggatgct
     2461 tcaatgaata taagtatgga accattccgc gctcttgttg ccgataagtt accggaagaa
     2521 caacatgcac ttggattttc aatgcaaaca ttgctaattg gaattggtgc agttgtcggg
     2581 tcatggttac catatatgct aggaaactgg tttggtattt ctaaagaagc aactcacggt
     2641 ttagttcctg acaatgttac ttattcattt tattttggag cctttgtact tatttcttct
     2701 attatctgga ccgtaatatc tacgcaagaa tatccaccag aatattatga tgaagaaaaa
     2761 gatggagaaa ttgtaaagga aaaatttagg attccttcaa aaatgtggca attattgata
     2821 gtacagttct tctcatggtt tgccttattt tcaatgtggg tttatacaac accaacagta
     2881 gctctacatt tttttggcac tagtgatccc aactcagccg acttcaaaga agcggctaat
     2941 tgggtaggta tacttttcgg ggtttataat ggaatttcag ccataattgc attgtcgctt
     3001 ccaaaagttg ctgcaaaaat tgggagaaga aacacacacg cgatagcatt aacacttggt
     3061 ggtctatcat ttctgtcatt ttctgtaatt tcgaactatc aactacttat gatccctatg
     3121 ataggtatag gaatagcttg gggtagtata ttggctatgc catatgctat gttagcaaat
     3181 tccctacctc ctaaaaaaat gggaatgttt atgggattgt ttaacatgtc gataaccata
     3241 cctcaaatta ttaatggaat ttttggtgga ttaattttga agtatgcgtt tggtggtgat
     3301 cccctattat caatatattt agctggggtt ctaatgatat ttggtgcaat cagcacattt
     3361 tttgttaagg acaaattata actcattcaa taagaatgat gatgaatgct tttgaagccg
     3421 taatttttga cctagacggc gtaataacaa agacggcaac cacacatagc agagcatgga
     3481 aaaaaatgtt tgaccattat ctgcatgatc gctgtagtaa cctaaatgaa acattcaatg
     3541 cattcactcc ttctgattat ttaaattatg ttgacggtaa accacgatat gatggcgtga
     3601 aatcattttt ggaatcaaga aatattaatc tgccatttgg aaatcctgaa gatgacgtag
     3661 aggttgaaac aatttgcgga ttaggaaata gaaaaaataa ggtttttaac gaagtattga
     3721 tgaaggaagg tgttgaagtt tttccttcca caattaaatt aatggagcaa ctcaagaaag
     3781 atgatattag aattggtgtt gcctcttcga gtaaaaactg taaagcggtt ctcgaagctg
     3841 ctgatctgat gcattttgtt gaaacaagag tggacggtgt tattgctgca aaaatgggtc
     3901 ttaacggcaa accctctccc gatatattcc taactgcagc caagaatctt ggtgttgata
     3961 tcaataaaac aatcgttgtt gaagatgcgg tttcaggagt acaagctgga aaaaatggta
     4021 atttcggact tgtattagga ttagctcgtg aggaaaataa agaagcctta aaagcaaatg
     4081 gagcagacat tgtattaaac gatcttgaag agataacaat atctgaaatt aatagttggt
     4141 ttattaaagg tattgagaat gacaattggg agttatgcta ctacgattac gatccgagaa
     4201 aagaaaaatc gagagaagcc ttgctgactg taggaaacgg ttactttgga acacgtggtg
     4261 ctatggaaga aacttcttca agtgaaacca attatccggg cacatacata gcagggttat
     4321 ataacagact taaaacaaaa atagcaggca gagaaattga gaatgaggat tttgtagttg
     4381 ttccaaactg gcttcccata aattttaaaa ttgatgatga accttggttt gatcctaatg
     4441 cctgtaagat agaacaaatt gcacgtaagc tggactttcg taatggtctc ttaacgcgta
     4501 aaatgattgt taccgaccat aatggatata aaacccaaat tgaatcccaa aggattgcaa
     4561 gcatgtctaa cccacatgag gcagcaatta aatatagtgt tacacctctg aattattcag
     4621 ggaggattag cttttcaagt catcttgatg ggactgtaaa gaatgaagga gtggatcgct
     4681 ataaagactt aaactcatta cacttaaaat ttgttgaaca gggtggcaaa ggagcgacta
     4741 catggcttaa agtacgcact tctcaatcag aaatagaaat cgtggaagct gcaaaaatta
     4801 gactaatctc aaaaaatgat aatatagatt atgattttgg tatctgttat aatgatggta
     4861 ttccttatac ttttagcgat caaaaggtag aagtaaacag tacagttaca cttgagaaac
     4921 ttattacaat ctacgattca aataataacg gaaaagattt attacaaaag gcactggatg
     4981 aattaacaac aatgccctca tttgataagg tacttaaaga aagtagtcta gcttgggatg
     5041 caatatggaa aaaagctgac atcaaactta ttggcgatag aatttcgcaa aaaatgttac
     5101 gcttacatat ttatcacatg atgatcagtg cctcaccgaa taacaaaaca attgatgctg
     5161 gaataacagc tcgtggttta catggagaag cttatcgtgg tcacatcttt tgggatgaac
     5221 ttttcatcct tccatactac gacattcatt tcccaaaaac tgccaaatct gtacttatgt
     5281 atagatatag aagaattgac aaagctcgtg aatacgcttt aaaacatggt tataaaggcg
     5341 caatgtttcc gtggcaaagt ggaagtgatg gcagagaaga aactcaaatt cttcatttga
     5401 acccaataac gggtatttgg ggtgaagatt tcagttctct ccaacgacat gtttcgctgg
     5461 caatagccta taatatttgg cagtatttcc acattacaaa cgatttagaa tttatcgagg
     5521 attatggtgc agaaatatat ttagaaatat gtcgtttttg ggaaagtaaa tcgatattta
     5581 ataagaaaac aggtcgatac aatattgaaa aagttatggg tcccgatgaa ttccatgaaa
     5641 gttatcctgg tgctaaggta ggtggcattc gcgataatgc atatactaac attatggtag
     5701 cgtggttgtt tagtaaagtt caacatttta taggtgtaat gactgccgga ggaagagaga
     5761 aactgtttaa taaaattaat ttgcaggaaa atgaattagt taattggtta gacattgaga
     5821 gtaaattaaa tctggttatt aacaaacagg ttataattgc gcaatatgac ggttatttcg
     5881 aacttaaaga gctcgattg
//
LOCUS       DASCQP010000585         3506 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002110221, whole genome shotgun sequence.
ACCESSION   DASCQP010000585 DASCQP010000000
VERSION     DASCQP010000585.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3506)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3506)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3506
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002110221"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            65..616
                     /gene="pth"
                     /locus_tag="QF480_10110"
     CDS             65..616
                     /gene="pth"
                     /locus_tag="QF480_10110"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005861960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HJN06957.1"
                     /translation="MAGLGKIRTVYVNTRHNIGFEVVNILTDELKGESNIERLAVVSR
                     VKFRGRSLIIIKPTTFMNLSGKAIKYWLDKEKIPNERLLVILDDIALPIGTLRIKAKG
                     GDAGHNGLTDIIDKLGTNVFARLRIGIGDNFPKGRQSDYVLGCWTKSEEKLMIPRIEI
                     ASEIIKSFTVIGVGSTMTTYNNK"
     gene            complement(683..2206)
                     /locus_tag="QF480_10115"
     CDS             complement(683..2206)
                     /locus_tag="QF480_10115"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004583690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase"
                     /protein_id="HJN06958.1"
                     /translation="MANNEDLFKKIIAHAKEYGFVFQSSEIYDGLSAVYDYAQNGVEL
                     KNNIRDYWWKSMVQLHENIVGIDTAIFMHPTVWKASGHVDAFNDPMIDNKDSKKRYRA
                     DVLVEDHLAKIEAKITKEVSKAQKRFGESFDEKQFRETNPRVLDNMNKIEGIKNRLYT
                     AMDSNDMASIKTLIEDIGIACPVSGSRNWTEVRQFNLMFSTNMGSTAEGATEIFLRPE
                     TAQGIFVNYLNVQKTGRMKIPFGIAQTGKAFRNEIVARQFIFRMREFEQMEMQFFVRP
                     GEEMKWYEYWKEQRMTWHVSLGIPASKFRFHDHDKLAHYANAAADIEFDFPMGFKELE
                     GIHSRTDFDLSAHEEHSGKKLRYHDPELNQSYVPYVVETSIGLDRMFLAILSYAYTEE
                     NLDDGSSRIVMKLPPVLAPYKIAVFPLTKKDGLPDKAREIMEKLKYDHMCFYEEKDAI
                     GKRYRRHDAIGTPYCVTVDHQTLEDGTVTIRERDSMQQERISIDKISGIVTESLKAK"
     gene            complement(2215..2424)
                     /locus_tag="QF480_10120"
     CDS             complement(2215..2424)
                     /locus_tag="QF480_10120"
                     /inference="COORDINATES: protein motif:HMM:NF021381.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HJN06959.1"
                     /translation="MQKKEYVCAKCGNKHYEADEMRATGGAFAKIFDVQNKKFTTISC
                     TQCGFTEFYKRTTSTFGNVVDFFTN"
     gene            complement(2535..>3506)
                     /gene="argF"
                     /locus_tag="QF480_10125"
     CDS             complement(2535..>3506)
                     /gene="argF"
                     /locus_tag="QF480_10125"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005318430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004585 - ornithine carbamoyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HJN06960.1"
                     /translation="LKLLDFTPKEIKFLLELSADLKKAKYSGTEQKRLTDKNIALIFE
                     KASTRTRCAFEAAAYDQGANVTYLGPTGSQIGKKESMKDTARVLGRMYDGIEYRGFGQ
                     PIVEELGKYAGVPVWNGLTDEYHPTQILADFLTMMEHSDKPLHQVSFAFAGDARNNMG
                     NSLMVGAAKMGMDFRAVAPKQMWPDEELVKECKEIAKKTGAKILLTESVEEGVNGVDF
                     VYTDVWVSMGEADEVWKDRIAMMIPYQVNTEMMEKTGNSKVKFLHCLPAFHNRDTIVG
                     EEIYQKFGVEAMEVTDDVFESPASLVFDEAENRLHTIKAVMVATLGT"
BASE COUNT         1048 a          700 c          602 g         1156 t
ORIGIN      
        1 ataaagggaa taaataactt tatcccttta ttttattagt cactaaacat acggaaagtt
       61 tttaatggcc ggtcttggca agattagaac tgtgtatgta aatacaagac ataatattgg
      121 ttttgaagtt gttaatatct tgactgatga actgaaaggt gagtcgaata tagagcggtt
      181 agcagttgtt tctcgcgtta aatttcgtgg acgaagctta ataattatta agcctacaac
      241 atttatgaat ttaagtggaa aagcaataaa atattggctg gacaaggaaa aaatacccaa
      301 tgaaaggcta ctggttattc tcgatgatat tgcactaccc ataggaacat tacgcattaa
      361 agccaagggt ggtgatgccg gacataatgg tcttacagat attattgata aattaggaac
      421 aaatgtattt gccagactac gaataggcat tggtgataat tttccaaaag gaagacagtc
      481 agattacgta ttagggtgct ggacaaaatc tgaagaaaaa ctcatgatcc cacgaataga
      541 aatagcctct gaaattatca aaagttttac agttattggt gtcggtagta ctatgacaac
      601 gtacaataat aaatgacgac gtttcaaaaa tcagagtaat cagtgctctc ttatttgcac
      661 cgaatccata tttaaggtct tattattttg cctttaagct ctcggtaaca atcccggaaa
      721 tcttatcaat acttattctt tcctgttgca tactgtcgcg ttcacggata gtaaccgtac
      781 cgtcttcaag tgtttgatga tcaacagtta cgcaatatgg tgttcctata gcatcatgac
      841 gtcgataacg ttttccaata gcatcctttt cctcatagaa acacatgtga tcatatttca
      901 acttttccat tatttcacgt gctttatccg gcaaaccatc ttttttggta agaggaaaaa
      961 ccgcaatttt ataaggagca agtaccggag gaagtttcat aacaattcta gaactaccat
     1021 catcgagatt ttcctctgta taagcatagc ttaatatagc caggaacatt ctgtcaagtc
     1081 caatggatgt ttctaccacg taaggaacat aactttggtt taattcagga tcgtgatagc
     1141 gcaatttttt acctgagtgt tcttcatgag cactaagatc aaaatcggta cgtgagtgta
     1201 ttccctctaa ttctttaaaa cccattggga aatcaaactc tatatcagca gcagcattag
     1261 cgtaatgagc aagtttatca tgatcgtgga aacggaattt tgaagcagga atacctaatg
     1321 aaacatgcca ggtcattcgt tgctctttcc agtattcata ccatttcatt tcttcacccg
     1381 ggcggacaaa aaattgcatt tccatttgtt caaattcacg catgcggaat ataaactgac
     1441 gggcaacaat ctcatttcta aatgctttac cggtttgtgc aataccgaat gggattttca
     1501 ttctgcccgt tttttgcaca ttaaggtaat ttacaaaaat accttgcgct gtttcaggtc
     1561 ttaaaaatat ttctgttgct ccttcggctg ttgaacccat atttgttgaa aacatcaggt
     1621 tgaactgtct tacttctgtc cagtttcggg aaccggaaac cgggcatgca attccgatat
     1681 cctctataag tgttttgatt gaagccatat cgttgctatc catagcagta taaagtctgt
     1741 tctttatacc ttcaatctta ttcatattat ccagaacacg aggatttgtt tctctgaatt
     1801 gtttctcatc aaatgattct ccaaaacgtt tttgagcttt tgaaacctct tttgtaatct
     1861 tggcttctat cttagccaga tggtcttcta ccaaaacatc agctcgatag cgcttttttg
     1921 aatccttatt gtcaatcatg ggatcattaa aagcatcaac atgccccgat gctttccaaa
     1981 cagttggatg catgaatatg gcggtatcaa ttccaacaat attttcatgc aactgaacca
     2041 tcgatttcca ccaataatca cgtatgttgt tctttagttc aaccccattt tgggcataat
     2101 catataccgc acttaacccg tcgtaaattt cgctcgactg aaaaacaaaa ccatactctt
     2161 ttgcgtgagc tattatcttt ttaaataggt cttcgttgtt tgccatttgt tttattaatt
     2221 agtaaaaaag tcaaccacat tgccaaatgt actggtagta cgtttataaa actcagtaaa
     2281 tccgcactgt gtacacgaaa ttgttgtaaa ctttttattt tgaacatcaa aaattttggc
     2341 aaaagcacca ccagttgctc tcatttcatc ggcttcgtag tgcttgttac cgcatttggc
     2401 acaaacgtat tctttttttt gcatagtaat ctgttattaa atagtcattg cgagcaaagc
     2461 gaagcaatct caataaaaat tgcaataaga ttgcttcagt cgttcctctt tcgcaatgac
     2521 gattattgtt tcagttaagt ccctaaggtt gctaccataa cagctttaat ggtatgaagc
     2581 ctgttttctg cttcatcaaa aaccaaagat gctggtgatt caaaaacatc atcagtaact
     2641 tccatagctt caacaccgaa tttttggtaa atctcttctc caacaatagt atcgcgatta
     2701 tggaaagcag gaagacaatg taaaaatttt actttcgaat tacctgtttt ttccatcatc
     2761 tcagtattca cctggtaagg aatcatcata gcaattctgt ctttccaaac ttcgtcggct
     2821 tcgcccatgc taacccatac atctgtgtaa acaaaatcaa caccgttaac gccttcttca
     2881 acgctttcgg taagcaaaat tttagctccg gtttttttag ctatttcttt acattcttta
     2941 actagttctt catcaggcca catttgtttt ggggctacag cgcgaaaatc catacccatt
     3001 ttagcagcac caaccataag tgagttaccc atattattgc gtgcatcgcc tgcaaatgca
     3061 aaacttactt gatgtaaagg tttgtctgaa tgttccatca ttgttaggaa gtcggcaaga
     3121 atttgagttg ggtggtattc atccgtaagg ccattccata caggtacacc agcatattta
     3181 ccaagttctt caacaatggg ttggccaaaa cctctgtatt caattccatc atacatgcgc
     3241 ccaaggaccc gtgcagtatc tttcatcgat tcttttttgc caatctgtga ccctgtagga
     3301 ccaagataag taacgtttgc tccctgatca taggctgcag cctcaaaagc acatcttgtt
     3361 cgtgtagatg ctttttcaaa aataagagca atgtttttat cagtaagtct tttttgttca
     3421 gttcctgaat acttagcttt ttttaaatct gcagaaagtt caagcaggaa ttttatttct
     3481 tttggagtga aatccaacaa ttttag
//
LOCUS       DASCQP010000586         1586 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002111405, whole genome shotgun sequence.
ACCESSION   DASCQP010000586 DASCQP010000000
VERSION     DASCQP010000586.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1586)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1586)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1586
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002111405"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..494
                     /locus_tag="QF480_10130"
     CDS             <1..494
                     /locus_tag="QF480_10130"
                     /inference="COORDINATES: protein motif:HMM:NF014912.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ferritin family protein"
                     /protein_id="HJN06961.1"
                     /translation="NDVSINVLKTAILLERRGKAFYTHAANMSENSSVKKIFEMMAEE
                     ENAHIDFLVKQFKSFSNSNRFLEIVDHPEEDDSMEILTENVKAEISAAGFEAAAISAA
                     IDFENRAIEVYRKRADEATDKNEKEMYKILASWEAAHHHLLYKLNEDLKEKIWDDNNF
                     WPF"
     gene            611..>1586
                     /locus_tag="QF480_10135"
     CDS             611..>1586
                     /locus_tag="QF480_10135"
                     /inference="COORDINATES: protein motif:HMM:NF013237.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HJN06962.1"
                     /translation="MDTKESGFTSKLVHAGKIKDNHGSAITPIYQTSTFSFTDADQGA
                     RCFSGEEKGYIYTRLGNPNIEELETAVAELENGFGGIATSSGMAAVNTVYLTLLGQGD
                     HMIGHNSVYGPSLSIMEKLYPKFGVEYDFVDTTDIHNIEKVIKPNTKLLYLETPANPT
                     MGITDLKAATELAHKHGIIVRVDNTFCSPYLQRPIDFGVDIVLHSLTKFINGHADVVG
                     GVIVAKEEGLYKQLKYIMINVGFNMDPHQAWLVRRGLKTLSIRIDRAQENSIKVAEFL
                     EAHDKVDWVLYPGLKTHPQYELALTQMDGPGAMISFGLKGGLTAGKKVM"
BASE COUNT          551 a          240 c          322 g          473 t
ORIGIN      
        1 acaatgatgt atcgataaat gttctcaaaa cagcaatatt attagaacga aggggaaagg
       61 ctttttacac ccatgcagca aatatgagtg agaatagttc agttaagaag atatttgaga
      121 tgatggctga agaagaaaat gcacacattg attttttagt aaaacaattt aaaagttttt
      181 ccaatagtaa taggtttctt gagattgtgg atcatcctga agaagacgat tcaatggaaa
      241 tattaactga aaatgttaaa gctgaaatat ctgctgcagg atttgaagct gcagcaatat
      301 ctgccgcaat tgattttgag aatcgtgcta ttgaagtata tcgtaagcga gcagacgaag
      361 caactgataa aaatgaaaaa gaaatgtata agatacttgc ttcctgggag gctgctcatc
      421 atcatttgtt atataaactc aatgaagatt tgaaagaaaa gatatgggat gataataatt
      481 tctggccatt ttaaggaacg aggtatagca gggcagaaaa tccaaacagt tttataaatg
      541 taataataaa cctagtttgt agtttctgta ttaatcacaa ataaataatc attcgtaatt
      601 taatttagaa atggatacaa aagaatcagg atttacatca aagcttgttc atgctggtaa
      661 gataaaagac aatcatggca gtgcaattac accaatttat caaacatcaa cattcagttt
      721 tacagatgct gatcaaggag cccgttgctt ctcaggtgaa gaaaaaggat atatctacac
      781 cagactcggt aatcctaata ttgaagaact cgaaactgca gttgcggagt tggagaacgg
      841 ttttggaggt atagctactt cttcaggtat ggcagctgta aatactgtat atctcacttt
      901 gcttggacaa ggagaccata tgattggcca taattctgtt tatggcccct ctttaagtat
      961 tatggaaaaa ctctatccaa agtttggggt tgaatacgat tttgttgaca ccactgatat
     1021 tcataatatt gaaaaagtaa taaaaccgaa tacaaagtta ctatatcttg aaacgcctgc
     1081 caaccctaca atgggtataa cagacctaaa agcagctaca gaacttgctc ataaacatgg
     1141 tattattgtt cgtgttgaca atacattttg tagtccttat ttacagcgac caatcgactt
     1201 cggtgttgat attgttttgc attcattaac gaaattcatt aacggacatg ctgatgtagt
     1261 gggaggtgta attgttgcta aggaggaagg cctgtataaa cagctcaaat atatcatgat
     1321 caatgtaggt tttaatatgg atcctcacca agcatggctc gttcgtagag gtttgaaaac
     1381 tttgtcaatt aggatagata gagctcaaga aaactcaatt aaagttgctg aatttctgga
     1441 agcccatgat aaagtggatt gggtattata tcctggtttg aaaacacatc cgcaatatga
     1501 gttagcttta actcaaatgg atggccctgg agctatgatc tcgtttggac taaaaggtgg
     1561 acttactgct ggtaaaaaag tgatga
//
LOCUS       DASCQP010000587         2414 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002112871, whole genome shotgun sequence.
ACCESSION   DASCQP010000587 DASCQP010000000
VERSION     DASCQP010000587.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2414)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2414)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2414
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002112871"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..629
                     /locus_tag="QF480_10140"
     CDS             <1..629
                     /locus_tag="QF480_10140"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009133376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HJN06963.1"
                     /translation="FFYEDTPYDPHSPYSASKASSDHLVRAYHDTYGLPITISNCSNN
                     YGPNQFPEKLIPLFINNIRHNIPLPVYGKGENVRDWLYVIDHAQAIDLIYHNGADGET
                     FNIGGHNEWTNIDLIKVVCKVMDEKLNREPGTSEKLITFVTDRAGHDLRYAIDSSKLQ
                     KELGWQPSLQFEEGINLTIDWYLNNQDWLDNVTSGNYQKYYDEMYGNR"
     gene            complement(647..>2414)
                     /locus_tag="QF480_10145"
     CDS             complement(647..>2414)
                     /locus_tag="QF480_10145"
                     /inference="COORDINATES: protein motif:HMM:NF012711.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HJN06964.1"
                     /translation="FVAIPAYPPRRNKGIDRIYTIIEDSGAAICLVSKQVHNDIQRNF
                     KDDDVLVQITWIVYEEINDNLAFDFHESKILPGDIALLQYTSGSTGNSKGVLVTQLNL
                     LYNSEYIRQAMGLDSNTVGVHWLPIFHDMGLIGGLLQLAYLGAVIIGMPPTEFLKRPL
                     NWLKAIDKYGGTIGGGPDFTYNYCLQKITDEECRDLDLSTLKVLYSGSEQIRKSTFKL
                     FSKKFAVSNFKEEQFYSCYGMAETTLIVTGGYYKSPPKYLNVDSKALSNNQIIVLEEE
                     DEAGTSLVSCGHTWMETVIEVIDPISLKRTAKDKVGEIWISGPTVAAGYWNKPEETER
                     IFGAIISDTNQGPFLRTGDLGFFHDNELYITGRIKDLIIIRGINFYPNDIEFSIQNGI
                     PELRRNGGAAFSITDDNVEKLVIVQELERTALRNVDHNEIIARMREVIAEEHMLDVHS
                     VVLIKTGSISITSSGKIQHRQTKYEYLHDDLNIVAAWEKQKSNTQETINIEETTPSEG
                     AIKEWIINWIIRNQNFQRKEIDLNKNIMSYGIDSLAAVTLETEISKQFGFQWHISSFI
                     LNPTINKLASEGMEIYRESLEN"
BASE COUNT          772 a          488 c          355 g          799 t
ORIGIN      
        1 ggttctttta tgaagataca ccttatgatc cacacagccc atactcagcg tcaaaggcaa
       61 gctccgatca tcttgttaga gcctatcatg atacgtatgg attaccaata acaatttcaa
      121 attgctcaaa taattatggc cctaatcaat tccctgaaaa actgatacca ttatttatta
      181 ataatattcg ccataacatt cctttacctg tatacggcaa aggtgaaaac gtacgtgact
      241 ggctttatgt cattgaccat gctcaagcta ttgacctaat ttatcataat ggtgctgatg
      301 gtgagacatt taacattggt ggccataacg aatggacaaa tattgatttg ataaaagttg
      361 tctgcaaagt tatggatgag aaacttaacc gcgaaccggg cacatcagaa aaactaataa
      421 cttttgtaac cgatagagct ggtcacgatt tacgttacgc aatcgactca tcaaaacttc
      481 aaaaagaatt gggatggcaa ccatcacttc aatttgaaga aggaattaat ttaacaattg
      541 attggtattt aaataatcaa gattggttgg ataatgttac gtcaggtaat tatcagaagt
      601 actatgatga aatgtatggg aaccgatgat caataataaa atcttactag ttttcgagtg
      661 actcccgata gatttccatt ccctcagaag ctaacttatt aattgttgga tttagaataa
      721 atgaacttat atgccattga aatccaaact gtttgcttat ttcagtttcc agtgtaactg
      781 cagccaatga atcaatccca tacgacataa tattcttgtt aagatcaatt tccttacgtt
      841 ggaaattttg atttcgtatt atccaattta taatccattc cttaatagct ccttctgatg
      901 gagtagtttc ttcaatatta attgtttctt gagtattact tttttgcttt tcccacgccg
      961 caactatatt caaatcatca tgcaaatatt cgtattttgt ttgacgatgc tggatcttac
     1021 cacttgaagt tattgagata cttccagttt ttattagtac aactgaatga acatccaaca
     1081 tatgttcttc tgcaattacc tctcgcatcc tagcaataat ttcattatga tcaacattac
     1141 gtagtgcagt acgttcaagc tcctggacta taacaagttt ctcaacatta tcatctgtaa
     1201 tggaaaatgc agcacctcca ttacgtctta attctggaat accattttga atactaaact
     1261 caatatcatt tggataaaaa ttaattcctc taataattat caaatcctta attcgtcctg
     1321 taatgtacaa ttcattatca tgaaagaaac ccagatcacc tgtgcgcaaa aaaggtcctt
     1381 gattagtatc agaaataatt gctccaaaaa tgcgttcggt ttcttccggc ttattccagt
     1441 atccagcggc tacagtcggt ccacttatcc atatttcacc aactttatct tttgcggttc
     1501 ttttcaaaga aattggatca ataacctcta ttaccgtttc catccaggta tgtccacaac
     1561 taacaagact tgttcctgct tcatcttcct cctctaatac aattatctga ttgttgctca
     1621 gggcctttga atcaacattt aaatatttgg gtggagattt ataataccca ccagtaacta
     1681 ttaatgttgt ttctgccatt ccatagcatg aataaaactg ttcttctttg aaatttgata
     1741 ctgcgaactt ttttgagaat agcttgaaag ttgattttct tatttgttca gacccactat
     1801 acaatacttt tagcgtacta agatcaaggt cacgacattc ttcatcagtt atcttttgca
     1861 aacaataatt atatgtaaaa tctggacctc caccaatagt accaccatat ttatcaattg
     1921 ctttgagcca attaagtggc cttttaagaa actcagtcgg tggcattcct ataattactg
     1981 cacccagata agctagttgc aataatccac ctattagtcc catatcatga aaaataggga
     2041 gccaatgaac accaacggta ttactatcta aacccatcgc ttgtcgtata tactcggaat
     2101 tatacagcaa attcaactgt gtaactaata ctcctttcga attacctgtt gaaccagacg
     2161 tatactgcaa taatgcgata tcacctggca atattttaga ttcgtgaaag tcaaaagcca
     2221 aattatcatt tatttcctca tagacaatcc aagtaatctg caccagaaca tcatcatctt
     2281 taaaattacg ttgtatatca ttatgtactt gctttgaaac caaacaaatg gcagcaccag
     2341 aatcctcaat aattgtatat atcctatcaa tacccttgtt ccttcttggc ggataagccg
     2401 gaatagcaac aaat
//
LOCUS       DASCQP010000588         3904 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002113421, whole genome shotgun sequence.
ACCESSION   DASCQP010000588 DASCQP010000000
VERSION     DASCQP010000588.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3904)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3904)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3904
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002113421"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            113..382
                     /locus_tag="QF480_10150"
     CDS             113..382
                     /locus_tag="QF480_10150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06965.1"
                     /translation="MKTYIKSYQNLALKNDLRILKILLIAPEFSDDFITDCEMDTEMN
                     LSLITASTLINILEAFKTSKYQKFPHVLFRDIVINEERILKALRK"
     gene            complement(513..596)
                     /locus_tag="QF480_10155"
     tRNA            complement(513..596)
                     /locus_tag="QF480_10155"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(560..562),aa:Leu,seq:caa)
     gene            complement(736..2694)
                     /locus_tag="QF480_10160"
     CDS             complement(736..2694)
                     /locus_tag="QF480_10160"
                     /inference="COORDINATES: protein motif:HMM:NF012311.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HJN06966.1"
                     /translation="MKHKLAFITFFTIFSILITVGQTTSDTDYISGEVMVQLTNKAEL
                     QELLSKYNLTNKHTISERFNIYLLKANNSSTSNASIINLLESDKSVVNVQNNHQLTLR
                     EADQTLPDDSLFNLQWALLNIGQSGGTPGADIDATFAWDINTGGVTALGDTIVVAIID
                     GGSDLNHEDLDFWKNHNEIPNNSIDDDTNGYVDDYHGWNAYNHNGTIPLDVHGVHVCG
                     IAGAIGNNTVGISGVNWNVKTLPIAGSSTNESTVVEALSYIYVVRERYDQTDGAEGAF
                     VVADNCSFGVDKGQPEDFPIWEAMYDSLGQIGILSMGATANRNWDIDSVGDVPTAFTT
                     DYMISVTNTTKKDIKYTNAGYGLTTIDLGAPGTIIQSLGINNTYRNSSGTSMATPHVT
                     GAAALLLAAADSAFIANYKSNPGQGALLIKDFILNGIDTLPDLEGKTVSGGRLNIYNS
                     IMLLVDVPILSTNMDSVYKELPLNTNATDTLIITNSGAGTLHYTITINDEPGWFMLSQ
                     FEGDVVAGESDSIIMQFNSVGIDTGYYNCTIHIDGEIIEDKSIPVEMYVYDNVGIHNY
                     HRTSNVKVFPNPFSTLVEFNFDVAKAGETIIEIYDQYGNIIYLDKKSINSGSVNLTWK
                     NQISYKGLYYYRLLFNGTLISSGKIVKM"
     gene            2910..3761
                     /gene="lipA"
                     /locus_tag="QF480_10165"
     CDS             2910..3761
                     /gene="lipA"
                     /locus_tag="QF480_10165"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005854269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016992 - lipoate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009107 - lipoate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HJN06967.1"
                     /translation="MDKALRKPHWLKSKIPSGKEYRSIRDIVEKNKLHTICTSGHCPN
                     MDECWGRGTATLMILGDICTRSCGFCNVKTGRPLPVDLKEPLRVARTVKLMKLKHCVL
                     TSVDRDDLDDLGAEIWILTVQAIKKMNPGITIETLIPDFDAQKEFIGKVCAAGQEVVS
                     HNLETVRRITPWARSRAKYEVSLETLKIISESEVVTKSGIMVGLGETSDEVIETLKDM
                     RSVGVDVITIGQYLQPSKKHLMVKEYVTPEQFEDYLKVGLDLGFRYVESSPLVRSSYR
                     AEKHVYL"
BASE COUNT         1359 a          666 c          686 g         1193 t
ORIGIN      
        1 gtaaaagaat caaaaataaa acgctaaatg aaagaaaaaa acaatatcaa aaaaaacaat
       61 tagttttgta ttaacactct cttaattttt gaccctaaaa gttcaagttt gtttgaagac
      121 atacataaaa tcataccaga atttagccct taagaatgat ttgagaattc taaaaatatt
      181 attaattgca ccagagttta gcgacgactt tattacagat tgcgagatgg atactgagat
      241 gaatttgtca ttaataacag catctacatt aataaatatt cttgaggctt ttaaaacatc
      301 aaagtatcaa aaattccctc acgtgttatt cagagacatt gtgataaacg aagaaagaat
      361 tttaaaagca ttaaggaaat aaatcgtaaa tgaattatta ttgtcttgtt caggaattca
      421 agcaaaatcg ttatagttga ctaatagttg actaaaactg aaaagaaaaa accgcaaaca
      481 attaattact aatcatttac gatttattca agtacccaag gccgggatcg aaccggcact
      541 ccttggaagg aactggtttt tgagaccagc gcgtctacca attccgccac ttgggcaaca
      601 aacatttaaa tggagtgcaa aagtaaaaaa aaccagatag tatgttactc gttaagtaat
      661 gaaaatttta gtgcagataa tctagttatg gaatcgtatt tcagatatgg caactagcct
      721 aaattaaaat caaaactaca ttttcacaat tttaccagaa gagataaggg tcccattaaa
      781 tagcagtcga taataatata atcctttata acttatttga tttttccatg taagattaac
      841 agagccggaa ttaattgatt tcttatcaag atagatgatg tttccatatt gatcatatat
      901 ttcgattatg gtttcaccgg ctttagcaac atcgaaatta aattctacca acgtagaaaa
      961 tgggtttggg aaaactttca catttgatgt tctatgataa ttatgaattc ccacattatc
     1021 ataaacatac atttcaactg gaattgactt atcttcaata atttctccat caatatgaat
     1081 agtgcaatta taataaccgg tgtcaatacc aactgaatta aattgcatta ttattgaatc
     1141 tgattcacct gcaaccacat caccttcgaa ttgcgaaagc ataaaccagc cgggctcatc
     1201 attaatagta atggtatagt gcagagtacc agctcctgaa tttgtaatta taagagtgtc
     1261 tgtggcattt gtgtttaaag gaagttcttt ataaacagag tccatattag ttgaaagaat
     1321 aggaacatcc accagcaaca tgatagaatt ataaatattt aaccgccctc cggaaacagt
     1381 cttcccttcc aaatccggga gagtatcaat cccatttagg ataaagtctt taatcaaaag
     1441 agctccttga ccaggattac ttttatagtt agcaataaat gctgaatcgg cggcagctaa
     1501 aagtagagcg gcagcgccag taacatgggg cgttgccatt gaagtacctg agctatttct
     1561 ataagtattg ttaatgccta atgattgaat aattgttcca ggagccccaa gatcaattgt
     1621 agttaagcca tatccagcat tagtatattt tatatctttt ttcgtagtat tagttaccga
     1681 aatcatataa tcagttgtaa aagctgtagg aacatctcca acactatcaa tatcccaatt
     1741 tctgttagca gtagctccca tacttaatat tcctatttgc cctaaggaat catacattgc
     1801 ttcccaaata gggaaatcct caggctgacc tttgtcaacc ccaaacgaac aattatcagc
     1861 aaccacaaaa gcaccttctg caccatctgt ttgatcatac ctttccctga caacatatat
     1921 atacgacaaa gcttccacta ctgttgattc atttgtagat gatcccgcaa ttggcaaagt
     1981 ttttacattc caattgacac ccgaaatacc cacagtgtta ttacctatag cacctgcaat
     2041 accacataca tgtacaccat gaacatcaag tggaattgtt ccgttatgat tatatgcatt
     2101 ccagccatgg taatcatcca catatccatt cgtatcatca tcaatactgt tatttggaat
     2161 ttcattatgg tttttccaaa aatccagatc ttcatgattc aagtcgctcc ctccgtctat
     2221 tattgcaacc acaattgtgt ctcctaaagc tgttacacct cctgtattta tgtcccaagc
     2281 aaaagttgca tcaatatcag ctccgggtgt tccgccactc tggccgatat ttagtagggc
     2341 ccattgcaaa ttaaaaagtg aatcatcagg taaagtttgg tctgcttccc tcaaagtaag
     2401 ttgatggtta ttttgaacat taacaaccga tttatcactt tctaacaaat taataatcga
     2461 tgcattgctt gtgcttgaat tatttgcttt aagcagataa atattaaatc tttctgaaat
     2521 tgtatgttta tttgtaaggt tatacttgct caataattct tgtaattctg ctttgtttgt
     2581 taactgaacc ataacttctc ctgaaatata atcggtatca gaagttgtct gtcccacagt
     2641 tattagtata ctaaaaatgg tgaagaaggt gataaacgca agtttatgtt tcattagata
     2701 agggtttcaa tttgctactt cgtaatgaca caaaaatata taaaatggtt ggatatagaa
     2761 attatataat tttgcaaaca cgagctgtga agataagtaa ggtattgaga aaagaaaagg
     2821 aaattaaaac aactacacaa taagaagttt acatattcac agacatttgc tagcctagta
     2881 tcattgttta gttaaaaaga agaagaaaat tggataaagc actcagaaaa ccacactggc
     2941 ttaaaagtaa gataccttcg gggaaagaat atcggtcgat tagagatatt gttgaaaaaa
     3001 ataagcttca tactatttgt acgagtggcc attgccctaa tatggatgaa tgctggggac
     3061 gtggcaccgc cacattaatg atattaggag atatttgtac caggtcgtgt ggattttgca
     3121 atgtaaaaac aggaagaccc ttaccagttg acttgaaaga accacttcgt gtggctagaa
     3181 ctgttaagct tatgaagctt aaacattgtg tacttacctc tgttgatcgt gatgatcttg
     3241 atgatctggg agctgaaatt tggatactaa ctgttcaggc aataaaaaag atgaatcccg
     3301 gcataacaat tgaaactctt atccccgatt ttgatgcgca aaaggaattt attggcaaag
     3361 tttgtgctgc agggcaggaa gttgtatccc ataatctgga aactgtaaga agaataactc
     3421 catgggctcg tagtcgtgca aaatatgaag taagtcttga aactttgaag attatttcag
     3481 agtcggaagt tgtaacaaaa tcgggtatta tggttggcct tggcgaaaca tcagatgagg
     3541 ttatcgagac tctaaaagat atgcgaagcg ttggtgtgga tgtaattact atagggcaat
     3601 atttacagcc ctcaaaaaaa catttgatgg tgaaagaata tgtaactcct gagcaatttg
     3661 aagactatct gaaggtagga ttagatcttg gttttaggta tgtggaaagt agtccgctgg
     3721 taagatcatc atatagggct gagaaacatg tttatttata agcacaggga atgcattaaa
     3781 gtaaataggt tttgaataaa aaaacgatat ataaaaacat tggtctcatc aattataaaa
     3841 aagcatggga ttaccaggaa gaattgtttg atgaggtagt tgcaatcaaa gaacagaatc
     3901 gaag
//
LOCUS       DASCQP010000589         1784 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002116956, whole genome shotgun sequence.
ACCESSION   DASCQP010000589 DASCQP010000000
VERSION     DASCQP010000589.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1784)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1784)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1784
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002116956"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..313
                     /locus_tag="QF480_10170"
     CDS             <1..313
                     /locus_tag="QF480_10170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006841858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="S-adenosylmethionine:tRNA
                     ribosyltransferase-isomerase"
                     /protein_id="HJN06968.1"
                     /translation="INTSSRNKHRVCAIGTTSMKALETAVSITGQIKPYSGWTNKFIN
                     PPYTFQTADAMITNFHMPMSPMMMMVSAFIGYDFLNEVYKTAIKEKYKFFTYGDAMLI
                     I"
     gene            353..1045
                     /locus_tag="QF480_10175"
     CDS             353..1045
                     /locus_tag="QF480_10175"
                     /EC_number="2.7.7.60"
                     /inference="COORDINATES: protein motif:HMM:NF001186.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HJN06969.1"
                     /translation="MNLEKHVLIVAGGDGKRMGHSLPKQFLLLSDKPVLFHSFNAFQF
                     LIDVKFTLVLNSEHFDYWTNICDSMGFEIPHHIAEGGPSRFHSVKSGLKNIPHSSLVL
                     IHDASRPFVSKETILKVIDVATLKGNAIPAIEVTDSIREISVSNNKIIDRNKLRAIQT
                     PQAFHSSLIKAAYNQTYNKTFTDDASVLEATGTKINIVAGNTENIKLSNPIDLVIGKS
                     ILNIGGDSSNTD"
     gene            complement(1088..>1784)
                     /locus_tag="QF480_10180"
     CDS             complement(1088..>1784)
                     /locus_tag="QF480_10180"
                     /inference="COORDINATES: protein motif:HMM:NF025017.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HJN06970.1"
                     /translation="VNFYTSSGCSLIIGPVIYEGEKTILQKLFSLDFVSLVVSGAGSV
                     GAGLPLMGNGANLAFSKDVFNSVNTINNTFRFSSGDDVFLIHNVTKKYGARAVGFLRH
                     RDSIVSTLPPLNLSEFVSQRKRWASKATGYKMLWPVIVSLTVFLFNTLLFLMLLGSFY
                     FSWLLPLFFLIILTKFVIDVPLVFNFLSFTEKQQLKPFFLLLEFVYPIYIVIIAITSF
                     ISRFGWKDRVKLK"
BASE COUNT          625 a          318 c          298 g          543 t
ORIGIN      
        1 tattaatact tcaagcagaa ataaacatcg agtatgtgcc attggaacaa ccagtatgaa
       61 agcactcgaa actgctgttt caattacagg ccaaattaaa ccctattctg gctggacaaa
      121 caagttcatc aatcctccat atacttttca aacagctgat gcaatgatca ccaactttca
      181 tatgccaatg tcgccaatga tgatgatggt tagtgcattc atcgggtacg atttcttaaa
      241 tgaagtttat aaaactgcta ttaaagaaaa atataagttt ttcacttatg gtgatgcaat
      301 gctgattatc taatgagcat tcatttttta aaccatgatt tgccttggtt tgatgaattt
      361 agaaaaacat gtgctgatag ttgctggtgg tgatggaaaa cgaatgggcc acagtttgcc
      421 caagcagttt ctgttgctta gcgataaacc tgtactattt cattcgttta atgcctttca
      481 gtttcttatc gatgttaagt ttacccttgt tttaaactct gaacattttg attattggac
      541 aaatatttgt gattcaatgg gttttgagat tcctcatcat attgccgaag gaggaccttc
      601 acgattccac agtgtaaaaa gcggattaaa aaatatacct catagttcat tggtgttaat
      661 tcatgatgct tcacgtcctt ttgtttcaaa agaaacaatt ttaaaggtta ttgatgtggc
      721 tacgcttaaa ggtaatgcta ttcctgcaat tgaagtaacc gattctatta gggaaatttc
      781 tgtttctaac aataaaataa ttgaccgcaa taaacttcgg gcgattcaaa ccccacaggc
      841 ttttcattca tctttgataa aagcagctta taatcaaact tataacaaga cttttactga
      901 tgacgcatct gttttagaag ctacaggcac aaaaattaat attgttgctg gtaataccga
      961 aaacatcaag ttatccaacc ctattgattt agttataggg aaaagcattc ttaatatagg
     1021 aggagattct tctaatactg attaacaaaa tggcatttca ttaaagatta ctgaaaaaat
     1081 tgcaacctta tttcagctta actctgtcct tccatccaaa tctagaaata aaggaagtaa
     1141 ttgcaataat tacaatataa ataggataca caaattccaa tagtaggaag aatggtttaa
     1201 gttgttgctt ttctgtaaag gataaaaaat taaaaacaag tggaacatcg attacaaact
     1261 tggtgagtat aatcagaaaa aacaatggta acaaccatga gaaataaaaa cttcctaata
     1321 gcatcaaaaa aagaagcgtg ttaaacagaa atactgtaag agagacaata acaggccaca
     1381 acattttgta gccggttgct tttgacgccc accttttacg ctgactgacg aactcggaca
     1441 aatttaatgg tggcaaagtt gatacaatag aatccctgtg ccttaaaaac ccaactgctc
     1501 gggcaccata tttcttagta acattatgaa ttaaaaacac atcatcccca gatgaaaacc
     1561 taaaagtatt atttattgta tttacagaat taaaaacgtc ttttgagaag gcgaggtttg
     1621 caccatttcc cattaacgga agtcctgcac caaccgagcc ggctcctgat accacaaggc
     1681 taacaaaatc cagagaaaat aatttctgta aaatggtttt ttcaccttca tatattacgg
     1741 gaccgataat caagctacaa ccagaagagg tataaaagtt taca
//
LOCUS       DASCQP010000590         4839 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002120255, whole genome shotgun sequence.
ACCESSION   DASCQP010000590 DASCQP010000000
VERSION     DASCQP010000590.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4839)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4839)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4839
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002120255"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..227
                     /locus_tag="QF480_10185"
     CDS             <1..227
                     /locus_tag="QF480_10185"
                     /inference="COORDINATES: protein motif:HMM:TIGR02436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="four helix bundle protein"
                     /protein_id="HJN06971.1"
                     /translation="LEERLVEFSVLIIEIVNEMPNSKAGNHLSGQLVRSGTSVALNYG
                     EAQSGESRKDFIHKMKVVLKELRKHLYASK"
     gene            434..1819
                     /gene="gatD"
                     /locus_tag="QF480_10190"
     CDS             434..1819
                     /gene="gatD"
                     /locus_tag="QF480_10190"
                     /inference="COORDINATES: protein motif:HMM:NF003217.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Glu-tRNA(Gln) amidotransferase subunit GatD"
                     /protein_id="HJN06972.1"
                     /translation="MDNDIFQGYKGEALDLLKKYKVRVWGTVIAKTTRGTFEGTVLPR
                     SENDDETHIVIKIVTGYNIGIDTGTITSMKETGYKKANYKIPEKEFPMTPGLPNVKLF
                     GTGGTIASRLDYRTGAVIPAFSPGELYGAVPELADICNLETEKIFAVFSENMGPKQYI
                     ALAKAIGKEIEKGIDGIVIGHGTDTLHHTGAALTFMCQNLPIPVVLVGSQRSSDRPSS
                     DAALNLMHAMKAAGHSDIAEVQVCMFGPTSDEYGLLHKGTRVRKMHSSYRSTFRTIGD
                     TPLATISRKEIIPIKKNYNKRRADKNVKILPYFNKKVTMLYYYPGMSPDTIDALVEKG
                     YKGIIIVGTGLGHVNKELYPAIERAHEKGVHMFMTLQTLWGYVHMFVYDTGRDMMAKG
                     IIPAGNMLPEVAWVKLSWILGQTEDPEEVKRMMLTPINDEITNREPYNGYLVYQGGIP
                     EVEEFIKNVHK"
     gene            complement(1826..2893)
                     /locus_tag="QF480_10195"
     CDS             complement(1826..2893)
                     /locus_tag="QF480_10195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018360128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-eliminating lyase-related protein"
                     /protein_id="HJN06973.1"
                     /translation="MNKINKGFASDNWSGVCPEIMMALNEVNEGHLFAYGEGNEQVSE
                     LAFAKFKEYFGEDIAVFFVYNGTAANVLGISHIMNSYHAVVTASTAHLNEDECGAPEK
                     FIGTKILEIHTENGKIHPGQIEPFLNSIGFQHHSQPKVISISQVTEMGTIYTPSEIKE
                     LADFAHNNNMYLHMDGARISNAVVALNTDFKSITTHAGVDILSFGGTKNGLMFGEVVV
                     FFNKELAIEFEYARKQGMQLHSKMRFIAAQFTRFLTDNLWESNARIANEMAKRLAVEI
                     KNFSQIIISQPVEANGIFVYMPADLIPKLQEQYFFHIWNESPQVEGNTNTGFKEVRLM
                     CSWDTTEEDINGFVNLIKDSL"
     gene            complement(2928..3950)
                     /gene="rlmN"
                     /locus_tag="QF480_10200"
     CDS             complement(2928..3950)
                     /gene="rlmN"
                     /locus_tag="QF480_10200"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016433 - rRNA (adenine) methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HJN06974.1"
                     /translation="MKEKLFGKTLEQLQIIIAEMGLPKFTARQITDWLYKKDITSIDE
                     MSNLSKTARFKLSEKYLFGLQTPSAIQTSTDGTKKYLFNIDNAGAVESAFIPETKRNT
                     LCLSTQVGCKMRCLFCMTGRQGLKSNLTAGEILNQIRSLPERHEITNLVYMGMGEPMD
                     NLEEVMQSLEILTAEWGFGWSKRRITVSTIGIVPAIKNFLENSECHLAVSLHTPFEAE
                     RSMLMPVSHVHSINDIISEIKLHDIGRQRRISFEYIVFGGINDSPKHVKELAKILNGI
                     KCRINLIRFHPIPKTQLPGTNEKRLQEFREALIDKGIITTIRASRGQDIDAACGLLST
                     KKEGGE"
     gene            4242..4619
                     /locus_tag="QF480_10205"
     CDS             4242..4619
                     /locus_tag="QF480_10205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019539739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide-stimulated promoter family
                     protein"
                     /protein_id="HJN06975.1"
                     /translation="MSRFRNKIDNEKKTVSAMIGIYCRSHHNTRKNELCESCSTLLNY
                     ALLRIDKCVFGLNKPSCEKCPVHCYKKKYRDEIKTIMRYAGPRMIFKHPILAIKHIVK
                     NRKSTNNSLVAPHLQTSKPSQAK"
BASE COUNT         1603 a          852 c          863 g         1521 t
ORIGIN      
        1 atttagaaga gcgattagtt gaattttctg tattaataat agaaattgta aacgaaatgc
       61 caaactcaaa agcggggaat catctttcag gccaattggt tcgctctgga acatctgttg
      121 cattaaatta tggtgaagca caaagtgggg agtcaagaaa ggactttatt cacaaaatga
      181 aggttgtatt gaaagaattg aggaaacact tatatgcctc aaaataatcc atagaacatt
      241 attatacagt gctgaaacta aaataatttc tgcaaaaaaa gagaatgacg aattaatatc
      301 aatttttgta aaaagtgttg aaacagctca aaagaatttg aaggcatgaa agtttttatt
      361 ccattttaat ctgaattcgt taattgacat tccttgttct taaatcaaaa taattgataa
      421 taaaaccaat ataatggata acgatatatt tcagggatac aaaggagagg cactagactt
      481 attaaaaaaa tataaagtac gtgtttgggg aacggttatt gccaaaacta cgcgtggcac
      541 ttttgaagga accgtattac cacgatctga aaatgatgat gaaacacata ttgtcattaa
      601 aatagttact ggctataata ttggtatcga cacggggaca atcacaagca tgaaagaaac
      661 cgggtacaaa aaagccaatt ataaaattcc agaaaaggag ttccctatga cacccggatt
      721 accaaatgtt aaactatttg gcacgggagg caccattgcg tcaaggcttg attatcgtac
      781 aggtgcagtt ataccagcat tttcaccagg tgagctctac ggtgctgtgc cagagctagc
      841 cgatatttgt aatctggaaa cagagaagat ttttgctgtt ttcagtgaga atatgggacc
      901 caagcaatac atcgcattag ctaaagcaat tggtaaagaa attgagaaag gaattgatgg
      961 aatagttatt ggtcatggaa cagacacatt acatcataca ggagccgctt taacttttat
     1021 gtgtcagaat ttgcctatac ctgttgtttt ggttggttca caaaggtcat cagaccggcc
     1081 cagttctgat gctgcgctta accttatgca tgcaatgaaa gctgcaggac attcagacat
     1141 tgctgaagta caagtttgta tgtttgggcc aacatctgat gaatatggat tattacacaa
     1201 aggtactaga gtgcgaaaaa tgcactcatc ttacaggtcc actttccgaa caattggtga
     1261 tactccgcta gctacaatta gtagaaaaga gataattcca ataaagaaaa attataataa
     1321 acgccgagct gataagaatg tcaagatatt accttatttc aataaaaaag taacaatgct
     1381 ttattattat cctggcatgt cgccggacac aatagatgct cttgtggaaa aaggctataa
     1441 ggggattatt attgttggca ctggattggg tcatgtaaat aaagagttat atccggcaat
     1501 tgagagggct catgaaaaag gagttcacat gtttatgact ctgcaaacac tctggggcta
     1561 tgttcacatg tttgtatatg atacgggtcg tgatatgatg gcaaagggta ttatcccagc
     1621 gggaaatatg ttacccgaag ttgcctgggt taagttaagt tggatattag gtcaaacaga
     1681 agatcctgaa gaggttaagc gaatgatgct tactcccata aacgacgaaa tcacaaatcg
     1741 tgaaccatac aacggttatc ttgtttatca gggtgggatt ccagaagtag aagagtttat
     1801 taaaaacgtg cataagtaat atttgctata aactatcttt gataagatta acaaacccgt
     1861 taatatcttc ctcagttgta tcccaagaac acatcaatcg cacctcttta aaacctgtgt
     1921 ttgtatttcc ttcaacctgt ggagattcat tccatatgtg aaaaaagtat tgttcctgca
     1981 gctttgggat taaatcagca ggcatgtaaa caaaaattcc atttgcttca accggttgtg
     2041 atataataat ttgtgagaag ttctttatct caacagctaa tctttttgcc atctcatttg
     2101 cgattcttgc gttgctttcc caaagattat cagttaaaaa acgagtaaat tgtgcggcaa
     2161 taaaacgcat tttagaatga agttgcattc cctgcttacg tgcatattca aattcaatcg
     2221 ccaactcttt gttgaaaaat actactactt ctccgaacat caaaccgttt ttagtacctc
     2281 cgaatgaaag gatatccact ccagcatgtg tcgtaatact tttaaagtcg gtattaagag
     2341 caaccaccgc attactaatt cgtgcaccat ccatatgtaa atacatattg ttgttatgag
     2401 caaagtcagc caattcttta atctctgatg gagtatatat agttcccatt tcggtaactt
     2461 gcgatattga gataactttt ggctgggaat gatgttgaaa cccaatgctg ttcaaaaatg
     2521 gttctatctg accagggtgt atttttccat tttcggtatg gatctccaaa atttttgttc
     2581 caataaattt ctccggtgca ccacactcat cttcatttaa atgtgcagtt gaagcagtaa
     2641 ctacagcatg ataagaattc ataatatgac taatccccag aacgtttgca gctgtgccgt
     2701 tgtaaacaaa gaaaacagca atgtcttcac caaaatattc cttgaacttt gcaaacgcca
     2761 gttctgagac ttgttcattt ccttcaccgt aagcaaataa atgtccttca ttaacctcat
     2821 taagggccat cattatttca ggacaaacac ccgaccaatt gtcgctggca aatcctttat
     2881 ttattttatt catctgaaaa ctattataat aacaaaaata agagaaatta ttcgcctccc
     2941 tctttttttg tagaaagtaa tccacaagcc gcatcaatgt cttgtccgcg agatgctcta
     3001 attgtagtta ttattccttt atcgattaac gcttctcgaa actcttgaag tcgtttttcg
     3061 tttgttcctg gtagttgagt ttttgggatt ggatgaaacc ttatcaggtt tatcctacac
     3121 tttataccat ttaagatttt tgcaagttcc ttaacatgtt taggagaatc gtttatgcct
     3181 ccaaatacaa tatactcgaa agatattctt ctttgccgtc caatatcatg tagtttaatt
     3241 tcagaaatga tgtcgttaat tgaatgaaca tgactaacag gcattaacat actacgctcg
     3301 gcttcaaatg gtgtgtgtaa actaaccgca agatgacatt cactattttc cagaaaattc
     3361 ttaatagctg gaacgattcc aattgtactt acggtaattc ttcttttact ccagccaaac
     3421 ccccattcag cagtaagtat ttctaaactc tgcattacct cctcaagatt gtccattggt
     3481 tctcccattc ccatatacac cagattagta atttcatggc gctcaggcaa acttcgtatt
     3541 tggttaagga tctcacctgc tgtaagattt gatttgagcc cctgacggcc cgtcatgcaa
     3601 aatagacatc tcattttaca tcctacctgc gtcgataaac acaaagtatt tcttttagtt
     3661 tctggaataa aagccgattc aactgctcct gcattatcaa tattaaaaag gtattttttt
     3721 gtgccatcag ttgaagtttg aattgctgat ggtgtctgaa gtccgaataa atatttttca
     3781 gataatttaa atcgcgctgt ttttgacaga ttgctcatct cgtcaattga tgttatatcc
     3841 ttcttataaa gccaatctgt aatttgccta gcggtaaatt ttggcaaacc catttcagct
     3901 attatgattt gtagctgctc cagcgtttta ccaaatagtt tttctttcat aaaaagacag
     3961 attaaaggca ggaaattaag tcacaaaatt ataaaaaaac caggtgattc ttagaatatt
     4021 tatttctgac atatggttct tattgggttt aaccctgatt atgcattaga acttcgtaat
     4081 gaggactaca agtacgataa aatataaagt tttgaaatga aagcatagca tcgctatggt
     4141 gaggcttcaa agcttaacga agtggtatat tttgctgtaa ttgtagttta taatagattt
     4201 tctaatgcat attctgggtt taatatattt ttgcaaactt tatgagcaga ttcaggaata
     4261 aaatagataa tgaaaagaag actgttagtg caatgattgg tatttattgc aggtctcatc
     4321 ataatacgcg taagaatgaa ctatgcgaaa gttgtagtac attgttgaac tatgcgttat
     4381 tgcgcataga taaatgtgtt tttggtttga ataaaccttc ttgcgaaaaa tgccctgttc
     4441 actgttataa aaagaaatac cgtgacgaaa taaaaaccat catgcgatat gcaggtccac
     4501 gaatgatttt taaacatcca atacttgcga ttaaacatat tgttaaaaat agaaaatcga
     4561 caaataattc actagtcgct ccccatcttc aaactagtaa gccttctcaa gctaagtgat
     4621 aaaacatcag taaaagaatt agtattatat ttggaaagct aatcagtaaa ctaaaaattc
     4681 taacacaact accataacag actttacagc agaaaagaca gtaggtgcac tttacacacc
     4741 tattatggtg ttatatagtt acttttacac tatgggtaat gaagaaataa aggtaatatt
     4801 atctatacaa ataagttagc agtaattaca ataaaccaa
//
LOCUS       DASCQP010000591         2704 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002120746, whole genome shotgun sequence.
ACCESSION   DASCQP010000591 DASCQP010000000
VERSION     DASCQP010000591.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2704)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2704)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2704
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002120746"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..180)
                     /locus_tag="QF480_10210"
     CDS             complement(<1..180)
                     /locus_tag="QF480_10210"
                     /inference="COORDINATES: protein motif:HMM:NF017451.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four helix bundle protein"
                     /protein_id="HJN06976.1"
                     /translation="MNLEELRVYELSMELGDNVWSIVERWNYFQKDTVGKQLVRSADS
                     IAANLSEGFGRFHFKE"
     gene            389..826
                     /locus_tag="QF480_10215"
     CDS             389..826
                     /locus_tag="QF480_10215"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010259777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0016018 - cyclosporin A binding [Evidence
                     IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HJN06977.1"
                     /translation="MKHAEIHTAKGIMKVNFYEADAPNTVDNFVGLAEKGYYDGLNFH
                     RVIPNFVVQGGCPDGTGAGGPGYSIDCELDGDNQYHDRGVLSMAHAGRNTGGSQFFIC
                     HSRDNTAHLDRNHTCFGKVYEGLDVIDNISEGDKIEKIVIVEE"
     gene            902..2584
                     /locus_tag="QF480_10220"
     CDS             902..2584
                     /locus_tag="QF480_10220"
                     /inference="COORDINATES: protein motif:HMM:TIGR02226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BatA domain-containing protein"
                     /protein_id="HJN06978.1"
                     /translation="MIFLRPEFLYGLFALSIPVIIHLFNFRKHKKLYFSDISRLKTIA
                     THTRKEQKLKHYIVLLLRMLAILFIILALAGPELKEDKLSTATPTVALYVDNSFSMMA
                     EGQNGRLFENARHYALQVVEESPDNTNFIVLSNTNNGELNRIHNKEAATSELEKLQIS
                     SNSKKLSQVAIMRDRILKNSELQNCDTYLFSDYQAYTTDISSLQEDSINNYFIIPFQH
                     LQNKNIYIDSCHIDNPDLMKEKVIGLTVWIKNDSDTDYEKVPLKLLNNDQQKAVAGVD
                     LKAGSSKQVNLNFTVSKSGWHYGQIEIEDFPITFDDHMYFAFEVKQNIEVLIIGFDDN
                     NNFLEKFYSSDDIFKISEMNYRTIDFGKLKNFDLIILNGIPEISSGLASHAKQYITDG
                     GNLLFIPSKKETSNDISIFLNEMNAGEVVRFDTTETRVTRLKLSNNLFSESITKVPQN
                     ADLPIVRQHYVFKFPSTSGVETLVSLLSGDDFLSKKNIGSGQLYILSVGLDGSYGNFA
                     SHLLFIPVMHGVASKGSLVQKLFYTLGKDNNINLNIDNDIVSETPFSFSSLQ"
BASE COUNT          949 a          470 c          410 g          875 t
ORIGIN      
        1 ttctttgaaa tggaatcttc caaagccttc actcaaattc gcagcaattg aatctgcaga
       61 tctaacaagt tgtttaccaa cagtgtcttt ttgaaaataa ttccatcttt caactatact
      121 ccaaacatta tctcctaact ccatcgataa ttcataaact ctaagttctt ctaaattcat
      181 attacattaa tcattaatcc tcaattatcc attatctaat tcactattga ccatttttct
      241 aattatccaa ttatctaatt atccaatcac caattatcta attatccaat tatctaatta
      301 tccaatcatc aatttccatt cattctataa aaataataat aaagattgta cttttgtaac
      361 ttcaaattta attaatcaaa acactaatat gaaacatgcc gaaatacata ccgcaaaagg
      421 tataatgaaa gttaattttt atgaagctga tgctcctaat acagttgata attttgttgg
      481 acttgcagaa aaaggttact atgatggtct aaattttcat cgtgtgatac caaattttgt
      541 agttcaggga ggttgccctg atggtactgg agctggtggt cctggatact caattgattg
      601 tgaacttgat ggtgataatc aatatcatga cagaggtgtt ctatcaatgg cccatgcagg
      661 aagaaacaca ggaggttcac aatttttcat ctgtcattcc agagataaca ccgcccattt
      721 agaccgcaat catacctgtt ttggaaaagt ttatgaaggt ttagatgtta ttgataatat
      781 cagtgaggga gataaaattg aaaaaatagt tattgttgaa gaataacgaa atgttgttga
      841 atatcgggtt ttcaatccaa taagacatcc tgataaccac atcaaccatt atattacacc
      901 tatgattttt ttacgtcctg aattcttgta tggtttattt gcgctttcca tacctgtgat
      961 tatacatctg tttaatttca gaaagcataa aaaattatat ttcagcgata tatcaagact
     1021 caaaactata gctacccata cccgaaagga gcaaaaactt aaacattata ttgttctgtt
     1081 actgaggatg cttgccattt tatttatcat tctggcactt gccggtcctg aacttaaaga
     1141 ggataaacta tctacagcca cacctacagt tgctctttat gtggataatt cgtttagcat
     1201 gatggctgaa gggcaaaatg gaagactttt tgagaatgca agacattatg cattacaagt
     1261 ggttgaggag tctcctgaca acacaaactt tattgtatta tcaaatacta acaatggaga
     1321 actaaacaga atacataaca aagaagcagc tacatcagaa ttagaaaaac ttcaaatttc
     1381 ttccaattcg aaaaaattat cacaggtagc tataatgcgc gacagaattc ttaaaaatag
     1441 tgaactacaa aattgcgata cttatttgtt ttctgactac caggcatata cgactgatat
     1501 ctcttctcta caagaagata gtattaataa ttattttata attccttttc agcatcttca
     1561 aaacaaaaat atctatatag atagctgtca tatcgacaat cccgacctaa tgaaagaaaa
     1621 agtaatcgga ctcactgtat ggataaaaaa cgattcagat actgattatg aaaaagttcc
     1681 acttaaatta ttgaacaacg atcaacaaaa agctgttgca ggagttgatt tgaaagccgg
     1741 atcctcaaaa caggtgaatc tcaactttac agtctcaaaa tcaggttggc attatggaca
     1801 aattgaaatc gaggattttc caataacttt cgacgaccac atgtattttg ccttcgaagt
     1861 aaaacagaac attgaagtac taataattgg ttttgatgat aacaataact ttctcgaaaa
     1921 attttatagc tctgatgata ttttcaaaat ttctgagatg aattatcgaa ccattgactt
     1981 tggaaaactt aaaaattttg atttgataat attaaatgga atacctgaaa tttcatcagg
     2041 tttggctagt catgcaaaac aatatattac tgatggtggt aatctactat ttataccctc
     2101 aaaaaaagaa acttcaaacg acatctccat ttttctaaat gaaatgaatg caggtgaggt
     2161 agttcgattt gacactacag aaactcgtgt aacccgatta aaactgtcaa ataatttgtt
     2221 ttcagaatct attactaaag tacctcaaaa cgctgatcta ccaattgtta gacagcatta
     2281 tgtttttaag tttcccagca cttcgggagt cgaaacactg gtgagcctac tctcaggtga
     2341 tgattttctt tcgaagaaga atattggatc agggcagctt tatatcctgt ctgtagggtt
     2401 agatggaagc tatggaaatt ttgcttccca cctacttttc atacctgtta tgcatggtgt
     2461 ggcctccaag ggaagtttag tacaaaaact attttacact ctaggtaaag ataataatat
     2521 caatctaaat attgataacg atatagtatc cgaaacacca ttttcctttt cttcgttaca
     2581 atgacaacat tacataattc caagtcagaa acataataat ggaaaattag tattatcact
     2641 cgacgatata gatcttcaaa atggttacta caaagtaatg atatcagatt cagcaattgc
     2701 agta
//
LOCUS       DASCQP010000592         3343 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002123573, whole genome shotgun sequence.
ACCESSION   DASCQP010000592 DASCQP010000000
VERSION     DASCQP010000592.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3343)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3343)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3343
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002123573"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            132..701
                     /locus_tag="QF480_10225"
     CDS             132..701
                     /locus_tag="QF480_10225"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013446530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HJN06979.1"
                     /translation="MIWEISTKEKEIYLTFDDGPHPEITPLVLKALDEYDAKATFFCV
                     GDNAMKYPETFKLILSKGHTVGNHSYDHLNGWKVSNNDYFVNIEKANKFIESNLFRPP
                     YGRIVPSQIKILKEKYSIIMWSVLTCDFDKKVSKKQCLKNSISGTKSGSIVVFHDSLK
                     SANNLFYALPLFLKHFNEQGFIFKSLPGS"
     gene            771..2531
                     /locus_tag="QF480_10230"
     CDS             771..2531
                     /locus_tag="QF480_10230"
                     /inference="COORDINATES: protein motif:HMM:NF024603.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HJN06980.1"
                     /translation="MIRILSILLLIFIASIIIKCAHPGTPIGGPKDVTPPQVVETSPE
                     NGSAMFNSNNFKVTFDEYVALVEIQQRALISPPMEDFPDFRIKGKSILVKFNEDLKPN
                     TTYSVYFGDAIVDITENNPLINYTYLFSTGDYVDSLSLSGYIINAFDLKPVEGTYVML
                     YKDNNDTITFDSLPYLVAPYYLSKTDIDGRFQFSGLADDYYLLFALNDKNSSFIFDQP
                     GEEIAFLDSLIKPVYVEIPKIDSIIVDSLANIDMASDSIIVDDESFLFETDNNDVSGE
                     VDLFLFLSPDTLQRLMKAEVIVKNTIRFSFSQPATNVEIKSLKFSPDSIWYVQDFSLE
                     KDTLYWYLNNPPIDSLELLLTQFDDTLGIAYLKLDTKKRSARLRKKDVEKKEKLGWKS
                     NISGSNLDLNQDLEIEFSQPFVKLNTDSSLLVIGTDSIWNPDFKFSDSLQMKIIFPFD
                     LTEETKYRIYFPDSSFTSWNNIHTDAIDLKFSTLKLSDYGIFTFELYPEKKQNYILQM
                     LSEKETVLRELYFTKDTSVTFDYLRPAIYYFKIIYDSNKNNSWDPGNYSLKIQPETVI
                     YFPKEIKVRANWEIEETWIW"
     gene            complement(2582..2881)
                     /locus_tag="QF480_10235"
     CDS             complement(2582..2881)
                     /locus_tag="QF480_10235"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HJN06981.1"
                     /translation="MNKSNIDIQKLELAANKLRAISHPMRIAIMELLSKGNKLSVTDI
                     HNALEIEQATASHHLSILKNNNVLVSQREGKKMYYALRNIALADILECVNRCNEN"
     gene            complement(2986..>3343)
                     /locus_tag="QF480_10240"
     CDS             complement(2986..>3343)
                     /locus_tag="QF480_10240"
                     /inference="COORDINATES: protein motif:HMM:NF024774.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="adenine deaminase C-terminal domain-containing
                     protein"
                     /protein_id="HJN06982.1"
                     /translation="ASSVAHDSHNIVAVGTTDKDIATAINLVIADSGGISLVNETEDM
                     ILPLPVAGLMSTSDGYKVAKSYQKMDDEVHKMGSKLRAPFMTLSFMALLVIPKLKLSD
                     KGLFDGDTFSFTNIFE"
BASE COUNT         1133 a          525 c          548 g         1137 t
ORIGIN      
        1 atactattgg gtatggattt atgatatttt aaacaaaact actaaaatgt tatttattaa
       61 tccaatacaa tgttattttt gtaactgatg attttaaaat ctcccgctat attaaaaaaa
      121 tatttcctaa tttgatttgg gaaatcagca ctaaagaaaa ggaaatctat ctcacttttg
      181 atgatggtcc tcatccggag attacaccac ttgtactaaa agctttagac gaatatgatg
      241 ctaaagcaac ttttttttgt gttggtgata acgcaatgaa gtatcccgaa acgtttaagt
      301 tgatacttag caaaggtcat acagttggaa atcatagtta tgatcacctg aatggatgga
      361 aagtttcaaa taatgattat tttgtaaata ttgagaaagc gaacaaattc attgaatcaa
      421 atctattcag acctccatac ggcagaatag taccatcgca aatcaaaata cttaaagaaa
      481 agtattcaat tataatgtgg tcagtgctta cgtgcgattt tgacaaaaaa gtaagtaaga
      541 agcagtgttt gaaaaattca atatcaggaa caaaatcagg atcaattgtt gtttttcatg
      601 atagcttaaa gtctgcaaac aatctctttt atgcacttcc tttattttta aagcacttta
      661 acgagcaggg ttttatattt aaatcgttgc caggtagtta gctatgtgcc attcactatt
      721 aacctttcac taatatttcg catctttgta tttcatttaa attaatgttt gtgattagaa
      781 tactgtctat tcttttattg atttttattg catcaattat tattaaatgt gcacatcctg
      841 gtacgcctat cggtggtccc aaggatgtta ctcctcctca agttgttgaa acaagcccag
      901 aaaatggaag tgccatgttc aatagtaata attttaaagt aacatttgac gaatatgttg
      961 cgcttgttga gatacaacaa cgagcattaa tatcccctcc catggaagat tttccagatt
     1021 ttagaataaa aggaaagtca attttggtta aatttaatga agatttgaaa cccaatacaa
     1081 cttattcggt ttattttgga gatgctattg ttgatattac agaaaataac cctctaatta
     1141 attacacata tcttttttca acaggtgatt atgttgactc attaagttta agcggatata
     1201 ttataaatgc attcgattta aaacctgtgg aaggtactta tgtaatgctt tacaaagaca
     1261 acaatgatac aatcactttc gactcactac catatttggt tgctccatat tacctcagta
     1321 aaacagatat tgatggtaga tttcagttca gcgggctggc tgatgattat tatttgttgt
     1381 ttgcactaaa tgataaaaat agtagcttta ttttcgatca acctggtgaa gaaattgcct
     1441 ttttagattc acttattaaa ccagtttatg ttgagatacc taaaatagac tcaataatag
     1501 ttgatagttt agctaacatt gatatggcgt cagattcaat tattgtagat gatgagtcgt
     1561 ttttatttga aactgacaat aatgatgtta gtggagaagt tgatctgttt ttgtttttaa
     1621 gtccagatac ccttcagaga ttgatgaagg cagaggttat agttaaaaat acaattcggt
     1681 tctcgttctc acaaccagca actaatgtag aaattaaatc cctcaagttt tcgcctgata
     1741 gtatctggta cgtacaggat ttttcattag agaaagatac attgtattgg tatctgaata
     1801 atcctcctat tgattctcta gaactcttgc ttacacaatt tgatgacaca ttaggaatag
     1861 catatttaaa actcgatact aaaaaaagat cggcccgatt gagaaaaaag gatgtagaaa
     1921 aaaaagagaa acttggttgg aaatcaaaca tatcaggtag taatcttgat ctaaaccaag
     1981 atctggaaat tgaattttca caaccatttg ttaaattaaa taccgattct tcattattag
     2041 tgattggaac tgacagcatc tggaatccgg attttaaatt tagtgacagc ctccaaatga
     2101 aaataatctt tccttttgat ttaacggaag aaacaaaata tcgtatttat ttccctgatt
     2161 catcgtttac aagctggaat aatattcata ccgatgccat tgatttaaag tttagcacct
     2221 tgaaattaag cgattatggt atttttacgt ttgaacttta ccctgaaaaa aaacagaatt
     2281 acatacttca aatgttaagt gaaaaggaaa ctgtactaag agaactttat tttaccaaag
     2341 atacttctgt aacctttgat tatttgagac cagcaatata ttatttcaaa ataatttatg
     2401 attctaacaa aaacaatagt tgggatccag ggaattacag tttaaaaatt caacctgaaa
     2461 ctgttatcta cttccctaaa gaaataaaag taagagccaa ttgggaaatt gaagagacct
     2521 ggatttggta ataactcaag aagaacacag atttgttaat tagattaata atttcttgtt
     2581 tttaattctc attacacctg tttacacatt caagaatatc tgccaaagca atgtttcgta
     2641 aagcataata cattttcttc ccttctcgtt gagaaaccag aacattatta tttttaagta
     2701 tacttagatg atgtgaggcc gttgcttgct caatctcaag tgcattgtga atatcagtaa
     2761 cacttaattt attgcctttc gacaacaatt ccataatggc gatacgcatt ggatgcgaaa
     2821 tggctcgtag cttatttgct gccaattcga gcttttggat atcaatatta cttttgttca
     2881 tccagataat tttttgcaaa agtagaaaat ataacatatg tataacatgc aaatatgtac
     2941 atatattttg ttaagtgttt agatttcaat ctagaaaaag aaaagctatt cgaaaatatt
     3001 agtaaagcta aacgtgtcac catcaaaaag acctttgtcg ctaagcttta gttttgggat
     3061 aacaagcaat gccataaagg ataatgtcat gaaaggcgcc ctgagttttg accccatttt
     3121 gtgaacctca tcatccattt tttgatagct cttcgcaact ttgtaaccat cagaagttga
     3181 cataagacct gctacaggaa gaggaagtat catatcttct gtttcgttca ccaatgatat
     3241 gcctcctgag tcggcgatta caagattaat tgctgttgct atgtctttgt ctgtagtacc
     3301 aacagcaaca atattgtggc tgtcgtgagc tacgcttgat gct
//
LOCUS       DASCQP010000593         2960 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002125407, whole genome shotgun sequence.
ACCESSION   DASCQP010000593 DASCQP010000000
VERSION     DASCQP010000593.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2960)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2960)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2960
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002125407"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1449)
                     /locus_tag="QF480_10245"
     CDS             complement(<1..1449)
                     /locus_tag="QF480_10245"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN06983.1"
                     /translation="MRILVLLLLLSVSSLLYSQNPQYPQYNPLFYSHVHDANEISFYV
                     DSAYQLDYNNNNQWVVDRLYIVSERNDLGQMLTGNEYEIVNSEPVLSNKWNSGYSDLG
                     SLNYFVNEIWNPDSSDWVLNERQIWNEAGYLTENRDLDWNFELPQACYGWGDVYLYNS
                     NNQVVEEQSLIWNIGGWWNSRRYLYTFDTSGLLTQHIWQKWDSDISEWYNATRWDYFY
                     EGNNNTYCFIYMWNIDTGIWEKSWKRKHDFDSNDWLVEVKYLRPITDSTYQNYIRWSY
                     SRNQMGKEVEKFEESFDTVTNNWKPFIKYNWEYLYDTMMTMFSSKSWKEDTGIWRNVF
                     RRNWEYTNDLQISYRLYESGDWVDWKNDEQDLYEFGEHGYLISYERNDWKLDINDEGY
                     WAPQYREEYYWPIGTEILDKEFSNDNVKIYPNPAQDLLKVKILDGETGTVRICNMNGK
                     ELKGIHSLSDNESIDISNLVKGVYLFIIETQSV"
     gene            complement(1530..2093)
                     /locus_tag="QF480_10250"
     CDS             complement(1530..2093)
                     /locus_tag="QF480_10250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06984.1"
                     /translation="MKSILKLHALIILVIFFITSTATAQYQNLGNANQGEIKRNPWFV
                     GGMIGGSFSNNGGSFEIAPLVGYKVTPDFNVGTRLTYIYSSFDYGGNIGKKTFHDYGG
                     SLFAQHRLFNFLVAHAEYEVLSVEYPVDQYTNTRRTINSLFLGGGLFQSMGGRGFATI
                     MILYNVLETKYSPYSNPVIRIGFGVGL"
     gene            2226..>2960
                     /locus_tag="QF480_10255"
     CDS             2226..>2960
                     /locus_tag="QF480_10255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06985.1"
                     /translation="MKIGKRHINIIMLISLLGILITVSCRKEEAISDNPSLKLSFSVD
                     SVVFDTVFTSIGSATKQLRVHNRSNSKIRISNLSLGLGEQSAYRINVDGVGANNFTDI
                     EISGGDSIYIFVRVTIDPKNINNPYVVEDDIHFLTNGNEQSVKLIAWGQDANYILADS
                     YIEGLPPFKIVADSLEVVHWTNQKPYVIYGYAVIDSYGKLIIDEGARIYFHEGSGLWA
                     YVDGVLNVDGTVENQVTFKGDRLEHEY"
BASE COUNT          995 a          568 c          410 g          987 t
ORIGIN      
        1 tacagattga gtttcaatta taaatagata tactccttta accagattgc taatatcaat
       61 agactcatta tcagacaatg aatgaatacc tttcaattct ttgccattca tattgcaaat
      121 ccttactgtt ccagtctctc catctaatat tttcactttt aaaagatctt gagctggatt
      181 tggataaatc ttcacgttat cattcgaaaa ttctttatcc aatatctcag taccaatagg
      241 ccaataatac tcttccctgt actgtggtgc ccaatatccc tcatcgttta tgtcaagttt
      301 ccaatcattt ctctcataac taataagata gccatgttcg ccaaattcat aaagatcctg
      361 ttcgtcattt ttccaatcca cccaatcacc actctcataa agcctataag aaatttgaag
      421 atcattagta tattcccaat ttcgtctaaa aacattcctc caaattcccg tatcttcctt
      481 ccacgattta cttgaaaaca ttgtcatcat tgtatcatac aaatattccc aattatactt
      541 aataaatggc ttccagttgt ttgttactgt atcaaaactt tcttcaaatt tctcaacttc
      601 ctttcccatt tgattacgac tataactcca tctaatgtaa ttttgatatg ttgaatctgt
      661 aattggtctt aaatatttaa cttcaactaa ccagtcgtta ctatcaaaat catgttttct
      721 tttccagctt ttttcccaaa tacccgtatc tatattccac atatagataa aacaatacgt
      781 attgttattc ccttcataaa aataatccca cctggttgca ttataccatt ccgatatatc
      841 actatcccat ttttgccaaa tatgctgtgt tagcaatcca cttgtatcaa atgtataaag
      901 ataccgtcga ctattccacc aacctcctat attccaaata agtgattgtt cttcaacaac
      961 ctgattgtta ctattatata aatagacatc accccaacca taacaagcct gtggaagttc
     1021 gaaattccaa tctaaatctc tgttctctgt taaataacca gcttcattcc atatttgtct
     1081 ttcgtttaat acccaatcgc ttgaatctgg attccaaatc tcgttcacaa agtaatttaa
     1141 tgatcccagg tctgaatatc cggaattcca tttattgctt aacacaggtt cgctattaac
     1201 tatctcatac tcatttccag ttaacatttg tccaagatca ttccgttcag aaactatata
     1261 tagcctatct actacccact gattattatt attataatca agttgatagg ctgagtcaac
     1321 ataaaaacta atctcattag catcatgtac gtgggaataa aacaaaggat tatattgagg
     1381 atactgtgga ttctgtgaat acagtaatga acttacagat aaaagtaata ataaaactaa
     1441 aatccgcatg acttattatt ttgatataaa gttaattatt atcttgttgt cagaaaagaa
     1501 ccggcatttt gagcattata aggtactgac taaagtccaa ccccaaaccc tattcggata
     1561 actgggtttg aatatggtga gtatttagtt tcgagcacat tatataatat catgatagta
     1621 gcgaatcctc tacctcccat cgattgaaaa agacctccgc ctagaaacag gctgttaata
     1681 gtacgtcttg tgtttgtata ctgatcaact gggtattcaa cacttagtac ttcatattca
     1741 gcatgtgcaa ccaaaaagtt aaataatcta tgctgcgcaa ataaactacc tccataatcg
     1801 tgaaaagtct tcttcccgat attaccacca taatcaaaac tgctgtatat atatgttaat
     1861 cttgtaccta cattaaaatc aggagtaact ttgtagccaa ccagaggtgc aatctcaaaa
     1921 cttccaccat tatttgaaaa actaccacca atcatgccac caacaaacca aggatttctc
     1981 ttaatttcac cctgattagc atttccaaga ttttgatatt gagcagtagc agttgaggta
     2041 ataaaaaata taaccaagat tataagtgca tgtaacttta aaatactttt cataacttta
     2101 ataattttcg accaataaaa tgtaaaaata caataaaaat aaatcttttg cgtatcagtc
     2161 ttaacaacat taattgttcc ttctattaat atatatttgc acaccaaaaa acattaaaca
     2221 tcaatatgaa aattggaaaa cgtcatatta atattatcat gctgatttct cttttgggca
     2281 tattgattac tgtttcatgt aggaaggaag aagctataag tgataacccc tcattaaaat
     2341 tgagtttttc tgtagactcg gtagtttttg atactgtttt tacatccatt ggttccgcaa
     2401 caaagcaact ccgagttcat aacaggtcta acagcaagat aagaatatca aatctcagcc
     2461 taggccttgg cgagcaatca gcgtatagga ttaatgtaga tggtgttggg gcaaataatt
     2521 ttaccgatat tgaaatttca ggtggtgata gtatatatat ttttgtaagg gtaaccatcg
     2581 atcctaaaaa tataaataac ccatatgttg tagaagatga tatccatttt ttaacaaacg
     2641 ggaatgaaca gagtgtaaaa cttattgcct ggggacaaga tgcaaattac atattagctg
     2701 attcatatat tgaaggatta cctcctttta aaattgtggc agatagtctt gaagtagttc
     2761 attggactaa tcaaaaacca tatgtaattt atggatatgc tgttattgat tcgtatggaa
     2821 aactaattat cgacgaagga gccagaatat atttccatga aggatcggga ttatgggcat
     2881 atgttgatgg agtactaaat gtggatggaa ctgtagagaa tcaggttact ttcaaaggtg
     2941 acaggctaga acacgaatac
//
LOCUS       DASCQP010000594         2802 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002131466, whole genome shotgun sequence.
ACCESSION   DASCQP010000594 DASCQP010000000
VERSION     DASCQP010000594.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2802)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2802)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2802
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002131466"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..454
                     /locus_tag="QF480_10260"
     CDS             <1..454
                     /locus_tag="QF480_10260"
                     /inference="COORDINATES: protein motif:HMM:NF019938.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1731 domain-containing protein"
                     /protein_id="HJN06986.1"
                     /translation="EKLMRVVYIRTGMVLDAKEGVLPKIATPFRWFIGGQIGSGNQWN
                     SWIHIDDEVRAIRFLIEHKGCHGAYNLTAPNPVKQKQLAIEVGHTLKRPSYLPKPAFL
                     LRFVFGKMANELLLNGLKILPEHLIEDGFKFNFEDINSALSDIYGNSK"
     gene            466..840
                     /locus_tag="QF480_10265"
     CDS             466..840
                     /locus_tag="QF480_10265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005637334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YccF domain-containing protein"
                     /protein_id="HJN06987.1"
                     /translation="MKFLGNIIWLLFGGFAIALEYFVASMFLLITIIGIPFALQTMKL
                     GILALWPFGSEVVQSNPPSGCLTTFMNILWFFIGGFWILLTHLFFGVLLFITIIGIPW
                     AQQHFKLAGLALTPFGRDIVTR"
     gene            901..1980
                     /gene="aroB"
                     /locus_tag="QF480_10270"
     CDS             901..1980
                     /gene="aroB"
                     /locus_tag="QF480_10270"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR01357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003856 - 3-dehydroquinate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HJN06988.1"
                     /translation="MNIPLVLETDPVTYIIGNEALEKSENKLNKHKRIIFITDENVEK
                     LCLPVFRQILPSINIDGVIVIKSGEENKTINQLTYIWSELTKLNADRDDLIVNLGGGV
                     VTDIGGMAAATFKRGLQFINFPTTLLGMVDAAIGGKTGIDFEGYKNQVGLFVNPQCVI
                     IDPIFLKTLEELEWQSGFAEVLKYCLILDKDLWQQLEGCNFKNVDDWTRVIIKAARDK
                     IDIVRSDTLEKGIRKNLNFGHTIGHAFETYYLNSDNPVTHGMAIAAGMICESWLSAQM
                     FNIESSHLSKIVNMIDRNFLRFDFSQDDIPEIIQLMKQDKKVRDNKHNFSLLKKLGKA
                     VHEIEVDNSLIIQSLEFYLKRKSND"
     gene            1981..>2802
                     /locus_tag="QF480_10275"
     CDS             1981..>2802
                     /locus_tag="QF480_10275"
                     /inference="COORDINATES: protein motif:HMM:NF012497.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HJN06989.1"
                     /translation="MSSIKLNRISTKVYGEVSICGSKSISNRILIIRELSGITHPIKN
                     LSISDDTQRLQEYLISIRDYQKTATPVLVDAKNAGTVSRFLTAFLTIKEGSWIITGNQ
                     RMKQRPIKGLVDGLKQLGAEITYTNIAGFLPLFIKGRNISGGEIEIDVSESSQFASAI
                     MMIGPLLKEGLKLRFREHPVSFPYIEMTSKLMMEFGANVEFNKNGINIEPKPYLFRSC
                     KVEADWSSASYWYETAALAEDVEIKIPGLTKNSMQGDSVLIDIFTQLGVETIFDSE"
BASE COUNT          921 a          426 c          558 g          897 t
ORIGIN      
        1 tgaaaaatta atgcgcgttg tatacatcag aacaggtatg gtccttgatg ctaaagaagg
       61 tgtactccca aaaattgcta ctccatttag gtggtttatt ggcgggcaga ttggtagcgg
      121 taatcaatgg aactcatgga tacacattga tgatgaagtg agagcaataa gattcttaat
      181 tgaacataaa ggttgccatg gagcttataa tctcaccgca ccaaatccag taaaacagaa
      241 gcagttggca atagaagttg gtcataccct taaacgtcct tcgtatttac caaaaccggc
      301 ttttctatta agatttgtat ttggaaagat ggcaaacgaa ttattgctga acggattaaa
      361 aattcttcct gaacatctta ttgaagatgg ctttaagttt aactttgaag atataaattc
      421 tgcattatct gatatttacg gtaattcaaa ataaatacta caattatgaa atttctaggt
      481 aatattattt ggttactttt tggtggattt gctattgcct tagagtattt tgttgccagc
      541 atgtttctgc tgataacgat tattggtatt ccgttcgcct tgcaaacaat gaaattaggt
      601 atactggcat tatggccttt tggaagtgaa gttgttcaat caaatccacc ttcgggctgc
      661 cttacaacct ttatgaatat cctctggttc tttattggtg gattttggat actactcact
      721 catttatttt ttggtgtttt attgtttatt acaattattg gaattccttg ggcgcaacaa
      781 cattttaaac ttgcaggtct tgctctcaca cctttcggta gagatattgt aactaggtga
      841 taatatctat tatttaataa ttttgcatca caaaaatttg taaaagctag atttgataat
      901 atgaatattc cattagttct tgaaacagat ccggtaactt atattattgg taatgaggct
      961 cttgaaaaat ctgaaaacaa gctaaataaa cacaaacgca ttatttttat cactgatgag
     1021 aatgtagaaa aattgtgtct ccctgttttc aggcaaatat tgccatcaat taatattgac
     1081 ggtgtgatag taattaaaag tggtgaagaa aataaaacaa taaatcaact tacatatatt
     1141 tggagtgagc ttactaaact aaatgctgat cgcgatgatt taattgttaa tctgggtggt
     1201 ggagttgtca ccgacattgg tggtatggct gctgcaacat tcaagagggg tcttcaattt
     1261 ataaactttc ctacaacatt gttaggaatg gttgatgctg caatcggtgg gaaaacaggt
     1321 atagactttg aaggttataa aaatcaagtt ggtctgtttg tgaacccaca atgtgtaatt
     1381 attgatccca tatttttaaa aacacttgaa gagttagaat ggcaatcagg ttttgcagag
     1441 gtgcttaaat attgtttgat acttgataaa gatctttggc aacagttgga aggttgtaac
     1501 tttaagaatg ttgatgattg gacaagagtt attattaagg ctgcaagaga taaaattgac
     1561 atcgttcgat cagacacact tgagaagggc attaggaaaa atcttaattt cggtcatact
     1621 ataggccatg cttttgaaac atattactta aactctgata atcctgtaac tcacggtatg
     1681 gctattgctg ctggcatgat ttgcgaatct tggttgtcag cacaaatgtt taatattgaa
     1741 agttcacacc tgagcaaaat agttaacatg atcgacagaa attttcttcg ttttgatttc
     1801 tcacaagacg atattcctga aattatccag ctaatgaaac aagataaaaa agttagggac
     1861 aacaaacata actttagtct actgaaaaaa ttaggaaaag ctgtccatga aattgaagtt
     1921 gacaatagtc tgattattca aagccttgaa ttttatctta aacgaaaaag taacgattaa
     1981 gtgtcgagca tcaaattaaa taggatttca actaaagttt atggggaagt aagtatttgc
     2041 ggatcaaaaa gcatcagtaa ccgcatcttg ataatcaggg agttatctgg gattactcat
     2101 ccaattaaaa atttgtcgat atcagacgac acacaacgtt tacaagaata tcttatcagt
     2161 ataagagact accagaaaac ggctacaccg gttctagtgg atgccaaaaa tgcaggaaca
     2221 gtttcacgct ttttaaccgc atttttaact attaaagaag gtagttggat tataacaggc
     2281 aaccaaagga tgaagcaacg ccctattaaa ggcctcgttg atggcctcaa acagctgggt
     2341 gccgaaataa catatacaaa tatagcaggg tttttgcccc tgtttattaa aggcagaaat
     2401 attagtggcg gtgaaattga gattgatgtc tcagaaagca gtcaatttgc gagtgccatt
     2461 atgatgatag gtcctttatt gaaagaaggt ttaaagctga gatttaggga gcatcctgtt
     2521 tcattccctt acatagaaat gactagtaag ttaatgatgg agtttggggc taatgttgag
     2581 ttcaataaaa atggaattaa tattgagcca aaaccttacc tttttcgctc ttgtaaagtt
     2641 gaagctgatt ggagttcggc gtcatattgg tatgaaacag ctgccctggc agaagatgtt
     2701 gagataaaga ttcctggcct tactaaaaat agtatgcaag gagacagtgt acttattgat
     2761 atattcacac agctgggagt cgaaactatt tttgatagcg aa
//
LOCUS       DASCQP010000595         4466 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002134986, whole genome shotgun sequence.
ACCESSION   DASCQP010000595 DASCQP010000000
VERSION     DASCQP010000595.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4466)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4466)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4466
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002134986"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..542
                     /locus_tag="QF480_10280"
     CDS             <1..542
                     /locus_tag="QF480_10280"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN06990.1"
                     /translation="VFYDRRAYDNTNTDVLIARLTDGGESFENIKISESPFMPSSSVF
                     FGDYTNITAHDGKIRPIWARADGTAMSIWIAIVDISTDLAESQERMPTSLEQNYPNPF
                     RESTYISYKLRRPSLVSLSVYDLFGRQVAILVNNKNMEAGKYIEQFNAVDYNISSGVY
                     YFTLQIGNTVEKQKMILVD"
     gene            620..1237
                     /locus_tag="QF480_10285"
     CDS             620..1237
                     /locus_tag="QF480_10285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06991.1"
                     /translation="MTKELNSFIDSIRALANEKGIGAITLEKLYENPDFSNELLEKYF
                     ENDDTLVEYILESERNKFEVIFVDHDFDGYYDAIDIIFTVSKEMASKFYNLSPSVTYS
                     YKDQYPEIYEDHLQKRIDFIHGKIQVNLQKGISEGMYRDDVSIELVARRYISRLLDLH
                     DPENFPPKDFSFTTLFMQMFDSFVMSIATDKGIKHYNKKRKTIKL"
     gene            complement(1291..2571)
                     /locus_tag="QF480_10290"
     CDS             complement(1291..2571)
                     /locus_tag="QF480_10290"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN06992.1"
                     /translation="MKIIILSLFIFATQTLPAQDTLKILQYNLLNYGNYTSYCTTSNN
                     NINDKDEYIRTIIEYAKPDIFTVNEISSSDSIHQRLLDNDLNVNGINYYRKANFIKIA
                     DSYLVNMLYYNWQKLELHSHTIAQSYIRDIDVYKLYYRSDDLVIGDTTFVICIVAHLK
                     SSGGANNENKRRDMVYNAMNYLNDYDDSNNYLFMGDFNVYSSSEPAYQLLTNYTNPEL
                     NFYDPIDTPGDWNNNYTFRFVHTQSTHDTQNGCASYSGMDDRFDFILLSDNIMQGFMD
                     VEYIEGSYTTIGQDGLHFDNAINSNPENISAPSNVIEALFGNSDHLPISIMLKVNKTL
                     GISNHEYSLFSEITFKNPVSETLGLSIQAKTNSNVNIKLMDIRGKCVFSDEVKVSAGQ
                     NHFNYNLSKLTAGIYFGIFTDGNNNSIVKKIVKR"
     gene            2706..3626
                     /locus_tag="QF480_10295"
     CDS             2706..3626
                     /locus_tag="QF480_10295"
                     /inference="COORDINATES: protein motif:HMM:NF013862.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HJN06993.1"
                     /translation="MIKLFQHFVLTGLIIIAGSSCSKKFMVISSPEKQPAARILKKQP
                     DVALVLGGGAFHGMAHVGVIKILEDAGIPIDLIVGTSAGSMVGALYADRPHIDSLIPL
                     INSTTAKDVFNFSLFRSKMGFVSGSRLQQYLNKQLTVSNIEDTKIPYVAVSTDIEKGV
                     SVAFKAGPIAPSVNASCAIPGIFEPVKMYGTTFVDGGIIDNIAVDIAKEYNPKFIIAV
                     SIMSFDTILDLKNYKSVVLRAYHVAMHRLSADIEKGADVIISPNLVGIPLMSGKDNEK
                     MYKLGLVAAKESLPEIKKMLEKKGIALKKK"
     gene            complement(3799..>4466)
                     /locus_tag="QF480_10300"
     CDS             complement(3799..>4466)
                     /locus_tag="QF480_10300"
                     /inference="COORDINATES: protein motif:HMM:NF015279.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="methylmalonyl Co-A mutase-associated GTPase
                     MeaB"
                     /protein_id="HJN06994.1"
                     /translation="SNNSSAFIRPSATKGALGGVTRASHEAIILCEAAGFDIIIIETV
                     GVGQSETEVSQMVDFFLLLMLAGAGDELQGIKRGIMEIADLIVINKADGDNITKAELA
                     ASVYKNALHLFPSLPNGWKPEVLTASAIGNDGIKEVWEKINEFTLQTKANGFFDNNRR
                     KQALNILNNSIEESLKSHFYSNPEISELMDGYQKKILNDEVNPYEAAQQLLDKYFSLD
                     QRE"
BASE COUNT         1471 a          712 c          765 g         1518 t
ORIGIN      
        1 ttgtttttta tgatagacga gcttatgata atactaatac tgatgttctt attgcacgat
       61 taacagatgg tggtgaatct tttgaaaata ttaaaataag tgaatcacct tttatgccaa
      121 gcagtagtgt gtttttcggt gattacacaa atattactgc tcatgatgga aaaataagac
      181 caatttgggc tcgagccgat ggaacggcaa tgtcaatttg gattgctatt gttgatatat
      241 ccacagattt ggcagaatct caggaaagaa tgccaactag ccttgaacaa aactacccaa
      301 atccgtttcg ggaatcaact tatatttctt acaaacttcg cagaccatca ttagtttcgc
      361 tttcagtgta tgatttattt gggagacagg ttgctatctt ggttaataat aaaaatatgg
      421 aggccggaaa atatattgaa caattcaatg cggtagatta taatatttcc tcaggagtat
      481 attattttac tttacaaatt gggaatactg ttgaaaaaca gaaaatgatt ttagtagatt
      541 aacaaaaatc aaaagaaaat tatcttttaa tttgtatttt tctacttttg tgaactattc
      601 tttcatttcg ttttctttta tgacaaaaga acttaactca tttatcgata gtattagagc
      661 ccttgccaat gaaaagggaa ttggggctat cactctggaa aaattatatg aaaatcccga
      721 tttttctaac gagttacttg aaaaatactt tgaaaacgac gatacattag ttgagtatat
      781 tcttgaaagt gagagaaaca aattcgaagt aatttttgtt gatcatgatt ttgatggtta
      841 ttatgatgct attgacataa tatttacagt gagtaaagag atggcatcga aattctataa
      901 cctcagccca tcggtaacat atagttataa agaccaatat ccggaaattt atgaagatca
      961 cctccagaaa aggattgatt ttatccatgg aaagattcag gtaaacctcc aaaagggtat
     1021 aagcgaagga atgtatcgtg atgatgtgag cattgagctc gtagctcgcc gatatataag
     1081 tcggttgtta gatttacatg atccagagaa ttttccccct aaagattttt cctttactac
     1141 attgtttatg caaatgtttg atagcttcgt aatgagtatt gctactgata aaggaattaa
     1201 acattataat aaaaaacgga aaactataaa gttgtagttt ggggatattt actaaccaca
     1261 ctcacctgta gattttaaaa gcaggggcta ctaccttttc acaatctttt taacgatgct
     1321 gttattgtta ccatcagtaa atatcccaaa ataaatgcca gcagttaatt tggataagtt
     1381 gtaattaaaa tgattttgtc cggctgaaac tttcacttca tctgaaaata cacatttgcc
     1441 tcttatgtcc atgagtttta tatttacatt agaattagtc tttgcctgaa tacttaatcc
     1501 taaagtttcg gaaacaggat ttttaaatgt tatttccgaa aataatgaat attcatggtt
     1561 gctgatacct aatgtcttat ttacctttaa cataatcgat attggaagat gatcagaatt
     1621 accaaataaa gcttcaatta catttgatgg tgcacttatg ttttcggggt tgctgttaat
     1681 agcattatca aaatgaaggc catcctgtcc aatggtagta tatgatcctt ctatatattc
     1741 aacatccata aatccttgca taatattatc tgatagtaat atgaaatcaa atcgatcatc
     1801 catcccacta tatgaggcac aaccattttg tgtatcatga gttgactgtg tatgaacaaa
     1861 tcggaaagta taattattgt tccaatctcc aggagtgtca atcggatcgt aaaaattaag
     1921 ttcaggattt gtatagtttg taagtaattg atatgctggt tcgctactac tgtaaacatt
     1981 aaaatcaccc ataaatagat aattattgct atcatcataa tcattgagat aattcatagc
     2041 attataaacc atatctcttc gtttattctc gttattagct ccaccacttg attttagatg
     2101 agctacaatg catatcacaa acgtagtatc accaataact aaatcatcag atcgataata
     2161 aagtttataa acatcaatgt cgcgaatata gctttgggca attgtatgtg aatgcaactc
     2221 aagtttttgc caattataat acagcatatt cacaagatat gaatcagcta ttttaatgaa
     2281 attagctttt ctgtaatagt ttatgccgtt tacgttcagg tcgttatcca ataacctttg
     2341 atgtatggaa tccgaagatg aaatctcatt tacggtaaaa atatcaggct ttgcatattc
     2401 aattattgtt cttatatact catctttatc attaatatta ttattactgg ttgtacaata
     2461 ggaagtgtaa tttccataat taagaaggtt gtattgcagg atttttaagg tgtcttgtgc
     2521 aggtagagtt tgtgttgcaa aaatgaatag tgatagtata attattttca tctgatagat
     2581 ttttcaaata cgttaatgtt aatatttaga ttcatataac aaaagatatt gtaaaaaatt
     2641 caaacgctca gccaaagtta taattttacc ataactttgt ttgcctaatc aaaaaaatta
     2701 aaattatgat aaaattgttc caacactttg tattaactgg tttgattatt atagcaggat
     2761 cttcatgttc aaaaaagttt atggttataa gctcacccga gaagcaaccg gcagcaagga
     2821 tcttgaaaaa acaacctgac gttgctctcg ttttgggagg tggtgccttt catgggatgg
     2881 cacatgttgg ggtaattaag atcctcgaag atgctggaat tccaatagat ttaattgtag
     2941 gcactagtgc aggaagtatg gttggagcat tatatgcaga cagaccacat atcgattcgc
     3001 ttatcccttt aataaattct acgactgcaa aagatgtttt taatttttca ctatttcgat
     3061 caaaaatggg gtttgtttca ggtagcagac tgcagcagta tcttaataag caactaactg
     3121 tttcaaatat agaagacaca aaaataccat atgttgcagt ttctacagat attgaaaagg
     3181 gcgtttcagt tgctttcaaa gctggaccta ttgcaccatc agtaaatgct tcatgtgcaa
     3241 ttccgggaat atttgaaccg gtaaagatgt atggaacaac tttcgttgac ggcggaatta
     3301 ttgataatat agctgttgat attgcaaaag aatataatcc aaaatttata atcgctgtta
     3361 gtattatgtc gtttgacaca atccttgatt taaaaaacta taaaagtgtt gtactacgtg
     3421 catatcatgt tgcgatgcat cgactttcag ccgatattga aaagggtgcg gatgttatta
     3481 tttcacccaa tttagttggt attccgttaa tgagtggcaa agacaatgaa aaaatgtaca
     3541 aactgggatt ggtcgctgct aaggaatctt tgcctgaaat taaaaagatg cttgagaaaa
     3601 agggaatagc actaaagaaa aagtaagttg tattggaata tggcaataag gtataggata
     3661 atatggatat aggggttatc cgttcatgat agctatgttc attaacttta ctaaatgtaa
     3721 gaattgtcag taatacaagc tatgtagagg gttttgttaa aaactaggtt tgggacaagg
     3781 cacttattcc catataccct attccctttg gtccagtgaa aaatatttat ccaataattg
     3841 ttgtgcagcc tcatatggat ttacttcatc attaagtatt tttttttgat aaccatccat
     3901 taattcgcta atttcaggat tactataaaa gtggcttttc agactttctt caatactatt
     3961 attcaaaata ttgagagctt gttttcgtct attattgtca aaaaagccat tggcttttgt
     4021 ttgtaaagta aactcattaa tcttctccca aacttctttt attccgtcat ttccaattgc
     4081 agaagcagta agaacctcag gtttccatcc gttaggtaga gagggaaaca aatgcaatgc
     4141 atttttataa acagaagcag ctaattctgc tttcgtaata ttatctccat cggctttatt
     4201 aataactatc aagtcggcaa tttccataat cccacgttta ataccctgaa gttcatctcc
     4261 cgcacctgca agcattagga gtagaaaaaa gtcgaccatc tgtgaaactt ctgtttccga
     4321 ctgtcccacc ccaacagttt caattattat tatatcaaac cctgctgctt cacatagtat
     4381 gatagcctca tgactagctc ttgttacacc tcctagtgcg cccttggttg ctgaaggcct
     4441 tataaatgca cttgaattat tactca
//
LOCUS       DASCQP010000596         1636 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002145368, whole genome shotgun sequence.
ACCESSION   DASCQP010000596 DASCQP010000000
VERSION     DASCQP010000596.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1636)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1636)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1636
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002145368"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            185..1264
                     /locus_tag="QF480_10305"
     CDS             185..1264
                     /locus_tag="QF480_10305"
                     /inference="COORDINATES: protein motif:HMM:NF020382.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdhR family protein"
                     /protein_id="HJN06995.1"
                     /translation="MKNYFLTLLLLVFASIGFAQDPPLTEQEKSELLSKSPFNVIYPT
                     SILKSADKYFESQMGLYTKGVINEKDAHLIALGTAAATKCDYCVPYHVTEARRLGATE
                     EEIKTAILIAADIMRMSTLFYGNEYDLDAFKLMLRGPMSVLVVNYELKDISLDDHAKL
                     GAQVAPMFTSENVHGLIGKTFIGDTDDGVYGGVYYFTDQASMNAYLNSDLWKGIVAHP
                     NLVNFTTEVYSVAPISEVTNGIASARKTSSNGDDAKDIRVLIVNYELENMTLEEHAEL
                     GSKVGSNFSPENIDGLIGKTFIGNTSDGVFGGVYYFTDEDSMNTYLESDLWNEIVARP
                     NLVNFTTETYGVASISAISNGVPVK"
BASE COUNT          565 a          241 c          293 g          537 t
ORIGIN      
        1 taaagctaaa aatactacat aatttctcag agcatagctg tttgtacaaa tatttataat
       61 tacgtagaaa taagctatta cgcaatctgt tttagtatga taattttgtt accagatatg
      121 gtattatttt tttaattgat atattagcga ctaaataatt aataacttaa caaactaatt
      181 tactatgaaa aattattttt taacactttt attgctagtt tttgcaagca ttggctttgc
      241 acaagaccct cctttaacag aacaggaaaa atcagaatta ttatctaaaa gtccgtttaa
      301 tgtaatctat cctacatcaa tattaaaaag cgcagataaa tattttgaat cacagatggg
      361 attatatact aaaggagtaa ttaatgaaaa agatgctcac cttatagcac ttggaactgc
      421 tgccgctact aaatgcgatt actgtgttcc atatcatgtt actgaggcaa gaaggctagg
      481 agcaacagaa gaagaaatta aaacagcaat cttaattgcc gctgatatta tgcgcatgag
      541 cacgctattc tatggtaatg aatatgactt ggatgctttt aaattaatgc tgcgtggacc
      601 aatgagtgta ttggtagtta attatgaatt aaaggatatt agccttgatg atcatgctaa
      661 acttggcgct caggtagcac ctatgtttac atctgaaaat gtacatggac ttattggtaa
      721 aacctttatt ggagatactg atgatggtgt ctatggtggt gtgtactatt tcacagatca
      781 agcttccatg aatgcttatc taaactctga tttatggaaa gggattgtag cacacccaaa
      841 tttagttaat ttcacaacag aagtttattc tgttgcccca atatcagagg ttacaaatgg
      901 gattgcgtct gcaagaaaaa cttctagtaa tggcgatgat gcgaaagata tccgcgttct
      961 aattgtaaat tacgaacttg aaaacatgac acttgaagag catgccgaac taggatcaaa
     1021 ggtaggttca aatttttcac ctgaaaatat agatggttta attggaaaga cctttattgg
     1081 aaatacaagc gatggtgttt ttggtggtgt gtattatttt actgatgaag actctatgaa
     1141 tacatattta gaatctgatt tatggaatga aattgtagcc cgtcccaatc tggtaaactt
     1201 cacaactgaa acctatggag ttgcatctat ttctgcaata tcaaatggag taccagttaa
     1261 ataattgatg ttagattaga aaaatttcaa aaggaaatat gacaaaataa aatgattttt
     1321 aaaatacatt taagaaatga actgcacatt aattggatag tattatcatg cattttatta
     1381 gtacaaatta actcattctc ccagcccaat aaaagaacaa accaatggtt ttttgccaat
     1441 aatgttggga ttgattttaa ttctggggaa cctgttgagg gttatccttg tcctattgat
     1501 agtacggcac atggggaggt acctcttcta tgtgtgatac aaatggaaac cttcttttct
     1561 attctgacgg taaacatgtt tataataaaa atcatgaaat aatggaaaac agctatgctg
     1621 gtcctgatta taatca
//
LOCUS       DASCQP010000597         2297 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002145874, whole genome shotgun sequence.
ACCESSION   DASCQP010000597 DASCQP010000000
VERSION     DASCQP010000597.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2297)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2297)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2297
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002145874"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(120..431)
                     /locus_tag="QF480_10310"
     CDS             complement(120..431)
                     /locus_tag="QF480_10310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN06996.1"
                     /translation="MKTLAKIASLVITLSVLTTINLNASETKFSEESYIDDIPFNTKD
                     VYDNILAEKNLTEFNFEEEQYIDDIPFDTECVSAECLYQKAISVEFNFEEEVTIEDLQ
                     L"
     gene            672..1064
                     /locus_tag="QF480_10315"
     CDS             672..1064
                     /locus_tag="QF480_10315"
                     /inference="COORDINATES: protein motif:HMM:NF019301.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family membrane protein"
                     /protein_id="HJN06997.1"
                     /translation="MMTLTGKIARIIFAVPFAIFGIFHFMNAGAMSGMLPGWPFAEIL
                     VYFTGLCLIAAAFAIIFNKYARLASLLLALLLLIIVLFVHMPGLSDPDMMQRSMSAIL
                     KDVSLLGGALMVAGILDNNVAVDTKEDS"
     gene            1253..1702
                     /locus_tag="QF480_10320"
     CDS             1253..1702
                     /locus_tag="QF480_10320"
                     /inference="COORDINATES: protein motif:HMM:NF024212.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HJN06998.1"
                     /translation="MSSIDTRTFRHYLRHFERELNIQNTSSCCCGVTLTQCHTLMELH
                     NEDNIQLNELSQKLFLDKSTVSRTVETLVNQELVKREIPKQNRRTTNIKLSEKGLDVC
                     ETIHNGNDAYFEEALGAIPKNILPKFIEGFNTLVNKMIELNETGENK"
     gene            1680..2165
                     /locus_tag="QF480_10325"
     CDS             1680..2165
                     /locus_tag="QF480_10325"
                     /inference="COORDINATES: protein motif:HMM:TIGR01909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C-GCAxxG-C-C family protein"
                     /protein_id="HJN06999.1"
                     /translation="MKQEKISNRTEIAKSTFDSNFNCCQSVLSTYAKDFNLDKDTSLM
                     LASGFASGLSYQGKTCGAVVGAYMVIGLLAGYKNPDDELSKEITHGLIKEFNSSFVTL
                     HKSVECSELLGKDVCKPEEYEYLIENNIFDLNCPKFVGDACSILDNIIKRYKNGKQRI
                     F"
BASE COUNT          765 a          310 c          421 g          801 t
ORIGIN      
        1 cttgacgtca aaattgtttt aaacttgcta tcttgtttaa acttttagat tcgaatcttt
       61 ttaaggaaag ttttagctta tttaatgtcc ttcaattagt tgtttgattt ttgtttcttt
      121 tataattgta aatcttcaat agttacttct tcctcaaaat taaactcaac tgaaatagct
      181 ttttggtaaa ggcattcagc tgaaacacat tcagtatcga aaggtatatc atcaatatat
      241 tgctcttctt caaagttaaa ttcagtaaga ttcttctctg ctagaatatt atcatataca
      301 tctttagtgt taaaaggaat gtcatcaata tatgattctt cactgaactt agtttctgat
      361 gcgtttaggt tgattgtagt tagaactgat agtgtaatta cgagtgatgc gatttttgct
      421 agagttttca ttttactgaa tttttaatga ttaattactg acaaaaatat gttgataatc
      481 cactcaagta aatgattatt cggtgaatgg ggtgagtatt tcggtaaatg gactgagagt
      541 tatagttgca taaaaactct agatgaaatt gaaaattcaa ttattatttt atatttgtga
      601 atcagattca tctcgattaa tcatagaatt tatacactaa actattaata actaactaac
      661 attcaagaat catgatgaca ctaacaggaa aaattgctag aattattttt gcagtaccat
      721 ttgccatttt tggcatattt cattttatga atgctggcgc tatgtctggc atgttaccag
      781 gatggccgtt cgctgaaata cttgtatact ttacaggcct atgccttatt gcggctgcat
      841 ttgcaattat ttttaacaag tatgcccgcc ttgccagttt actacttgct ctattactat
      901 tgattattgt gctttttgtc cacatgcctg gtctgagtga tcctgatatg atgcagagat
      961 caatgtccgc aattctgaaa gatgtaagtt tattaggtgg ggctctgatg gttgctggta
     1021 ttcttgataa taatgttgct gttgacacta aagaagatag ttagataagg taacttgtta
     1081 tagattttat tacttaaact gagaaccata ctttcaatac ctgttgaagt attttttctt
     1141 tgtatctctt aaattttgtt aaaagaaata gttgtggtta ataatagttg tatattgcaa
     1201 cagttttgaa tcgcaatcaa ttatacaatt gttaataaac aataatttaa ttatgagctc
     1261 aatagataca aggactttca gacactattt gaggcatttt gaaagagagt taaatattca
     1321 aaacacttca agttgttgct gtggagttac attaactcag tgtcatacgc tcatggagtt
     1381 acataatgag gataatattc agctgaatga actaagtcaa aaactctttt tagataaaag
     1441 tacagtaagt agaactgttg aaacccttgt taatcaagag ttagtaaaaa gagagattcc
     1501 taaacaaaac agaagaacaa caaatattaa actttctgaa aaaggattgg atgtatgtga
     1561 aacaatacat aatggcaatg atgcctattt tgaagaagcc ttaggggcaa taccgaaaaa
     1621 tatactacca aaatttattg agggttttaa tacattagtt aataaaatga ttgaattaaa
     1681 tgaaacagga gaaaataagt aacagaacag agatcgctaa atcaactttc gatagtaatt
     1741 tcaattgttg tcaatcagtt ttgtcaacct atgctaaaga ctttaaccta gataaagata
     1801 caagtttgat gttggcgtct ggctttgcat cgggtttatc gtatcagggc aaaacctgtg
     1861 gagctgttgt tggtgcctac atggtaattg gtttattagc aggatataag aaccccgacg
     1921 atgaactttc taaagaaata acacatggct taataaagga gtttaattca agttttgtca
     1981 ccttacataa gtcagttgaa tgtagtgagc tactaggtaa agatgtttgt aaaccggaag
     2041 aatatgaata tcttattgag aataacattt ttgatctgaa ctgcccaaag ttcgttggtg
     2101 atgcctgtag tatattggat aatataatta agagatataa aaatgggaag caaaggatat
     2161 tttgagaatg tagcaactga atgggactca atgagagaat cattcttccc ggagtcgata
     2221 agagagaaag cttttggcat gatcgagata tcggataacg atgttattgc ggatataggt
     2281 tgtggtacag gttatat
//
LOCUS       DASCQP010000598         2101 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002146085, whole genome shotgun sequence.
ACCESSION   DASCQP010000598 DASCQP010000000
VERSION     DASCQP010000598.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2101)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2101)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2101
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002146085"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(8..1000)
                     /locus_tag="QF480_10330"
     CDS             complement(8..1000)
                     /locus_tag="QF480_10330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN07000.1"
                     /translation="MIRFFSTGYISRYILLILFGLIIWTPSLVFPTLYTGISSFAYNQ
                     ILFLTAQNIYLLSFASFFITLLTAFLLNKCAIDNGLSGKISTLIALIYILLTSSLSGE
                     SHNNPVIWINFLLVFVVGNLMRLPCVNNTIPVIFNAAFLIGLASLFYSQLVFLVLLIW
                     VSIFIHRIVTWRNLVVTLIGTILPYFLLLTLFFAMDILLEESYVLFDSLQIDTKIVFM
                     SDPVEIAVSVIWLLIIIISAVGVANRLPEKNITLRRNLIITYFYIGTVLLILIIFTKS
                     LVSTLLFCIPTALLIGHWLSSIRKTRWYDITLSLVLILIILNQYLYLLFSLYDG"
     gene            complement(1061..>2101)
                     /gene="purD"
                     /locus_tag="QF480_10335"
     CDS             complement(1061..>2101)
                     /gene="purD"
                     /locus_tag="QF480_10335"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006844490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004637 - phosphoribosylamine-glycine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HJN07001.1"
                     /translation="YFTNDPVLKDIHVIGPSKAGAMLEGSKSFAKIFMDKYNIPTAAY
                     RNFNSTNLEEGFTFLESLSPPFVLKADGLAAGKGVLILNDVEDAKNELASMINDQKFG
                     DASANVVIEEFLNGIELSVFILTDGKDYVILPEAKDYKRIGEADTGLNTGGMGSISPV
                     AFANVEFMRKVEDRIIIPTVKGLASEGINYKGFIFFGLINVDDNPFVIEYNCRMGDPE
                     AESVIPRIKTDMVDLFEATAVGTIDKTEIEFDPRTAASIMLVSGGYPGNYDKGKIISG
                     LENVNNCILFHAGTATDIDNNSIKTNGGRVMAITSLGDNLSKALELAYSNADMINFDG
                     KYVRKDIGFDLT"
BASE COUNT          765 a          376 c          314 g          646 t
ORIGIN      
        1 tagcaattta gccatcgtat aagctaaata aaagatataa gtattgattc aagattataa
       61 gaatcaatac taatgataaa gtaatatcgt accaacgtgt ttttctgata ctgcttaacc
      121 aatgcccaat taagagtgct gtaggaatac aaaaaagcaa agttgacaca agtgatttag
      181 taaatattat cagaattaat aataccgtac caatataaaa atatgtaatt attaaattcc
      241 tgcggagggt tatgttcttt tcgggtaagc gatttgcaac acctactgcc gaaataatta
      301 ttattaaaag ccaaattact gatactgcta tctcaactgg atcagacata aagacaattt
      361 tagtatcaat ttgtaatgaa tcaaaaagca catatgattc ttccagtaat atatccattg
      421 caaaaaataa tgtaagcaac agaaagtaag gaagaatagt accaataagg gttacaacga
      481 ggtttctcca agtcactatt cgatgaataa aaatggatac ccaaataagc aatactagaa
      541 atactagttg ggaataaaaa agcgaagcaa gaccaattaa gaatgctgca ttaaagatta
      601 ctggaatcgt attattaaca caaggaagac gcataagatt tcctactaca aaaaccaata
      661 ggaagttaat ccatattaca ggattgttat gagattctcc agacagtgaa ctggttaaca
      721 atatataaat caatgctatt aatgtgctta tctttccact taagccatta tcaatagcac
      781 atttgtttag caagaatgcc gttaataaag ttataaaaaa cgaagcaaaa gatagcaaat
      841 agatattttg ggcagtaaga aatagaattt gattatacgc aaagcttgaa attccggtgt
      901 ataaagttgg gaagactaag gatggagtcc aaattattaa tccgaataaa atcaacagta
      961 tgtatcgtga aatatatccg gtgctaaaaa accttatcat ttacaatttc tgtttatctg
     1021 aagttgaata ttaaagaaac ttcgtagact gctatgagta ttatgttaaa tcgaagccaa
     1081 tatctttccg tacatatttc ccatcaaagt taatcatatc agcatttgaa taagcaagtt
     1141 caagagcctt actcaaatta tctcccaggg atgtaatagc cataacacgt ccaccattag
     1201 tctttattga attattatca atatcagttg ctgttccagc atgaaataaa atacagttat
     1261 taacattctc gagtccgcta attattttac ccttatcata attacccggg taccctcctg
     1321 atactaacat aatagaagca gcagtacgtg gatcaaattc aatttctgtt ttatcaattg
     1381 taccaactgc cgttgcttca aataagtcaa ccatatctgt tttaattcgt ggtatgaccg
     1441 actctgcttc cggatctccc atcctacaat tatattctat aacaaatgga ttatcatcaa
     1501 catttattaa gccgaagaaa ataaatccct tgtaattaat accttcagac gccagtcctt
     1561 taacagtagg aataataata cgatcttcta cttttctcat aaattccaca ttagcaaacg
     1621 caacaggtga tatagaaccc attcctccag tatttaaacc agtatcagct tctccaatgc
     1681 gcttataatc ttttgcttcg ggtagaataa catagtcttt gccatcagtt aaaataaaaa
     1741 ctgagagttc aataccgttt aaaaattcct caattaccac attagctgat gcatcaccaa
     1801 atttctgatc attgatcatt gatgcaagct cattttttgc atcttctaca tcgttcaata
     1861 ttaatacacc tttaccagct gccagtccat cagctttcag aacgaaaggt ggggataagc
     1921 tttcaagaaa tgtgaatcct tcttctaagt tagtggaatt aaaattacga tatgcggcag
     1981 taggaatatt atatttatcc ataaatattt tggcaaatga tttactccct tccaacattg
     2041 cacctgcttt ggatggacca attacatgaa tgtccttcaa cacaggatca tttgtaaagt
     2101 a
//
LOCUS       DASCQP010000599         2289 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002147494, whole genome shotgun sequence.
ACCESSION   DASCQP010000599 DASCQP010000000
VERSION     DASCQP010000599.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2289)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2289)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2289
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002147494"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1380
                     /locus_tag="QF480_10340"
     CDS             <1..1380
                     /locus_tag="QF480_10340"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HJN07002.1"
                     /translation="WFPIEFYIDIDEDEAICYVDGVVVAEWQFSLQSFGDPGTNQLGG
                     VNIYAGAPTGETPKYYFDNIGYVAVDPGIAAPIIDVDPTSFFLTLEEGEVTTETMTIG
                     NLGVEELSYQIVTTYPQTGKALTAEPAGAHTPKNLHQVITADPDYSPSTSTPASRDVT
                     LNYDTENFTAIGTSSDYEWRVAAMFPDAMVQPFIGMEINEIDVFINDPGIEYKAQIYD
                     MGSYNTPGPGDLLLEQSFSANAGSWNTITLDTPIKLDGSDIWVGYWLSAYADTYVPGC
                     DAGPADPNGDWMAFGPGWGHLSENPDLNYNWNIRANVTGDPIIQWLSPDPTTGFLVEN
                     EFEDIDITIDASNLVADQYSGKLKIRNNDPTNEQVDVSITLGVLVGVGENGVNEYIAV
                     YPNPASTFLHVKSNGEITNVRLVNTIGQVVYNNSTDANIDISNFERGVYFIQVETKNG
                     TNTQKVLIQ"
     gene            1443..1961
                     /locus_tag="QF480_10345"
     CDS             1443..1961
                     /locus_tag="QF480_10345"
                     /inference="COORDINATES: protein motif:HMM:NF012797.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrmH family RNA methyltransferase"
                     /protein_id="HJN07003.1"
                     /translation="MKNSSVDLFNKLGTSEILKGVSQPIIIADRLRTPENIGLILRLA
                     GNINALNTLFISDEGHKFKKYKIIKTASGAVTKVDWKIIKPAELEDFLPNDYKIVALE
                     TCKDASSIFSFKFPKKVAFMVGNEVHGISEEMLSIAHQKVYIPVPGPISSLNVTHALS
                     IALFEWLKQIQV"
     gene            complement(1969..>2289)
                     /locus_tag="QF480_10350"
     CDS             complement(1969..>2289)
                     /locus_tag="QF480_10350"
                     /inference="COORDINATES: protein motif:HMM:NF017266.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016645 - oxidoreductase activity, acting
                     on the CH-NH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MnmC family methyltransferase"
                     /protein_id="HJN07004.1"
                     /translation="MHDNKCKFINSSNKFSVFIVEDKIENVKLHPDVYDVVFFDAFSP
                     DAQPEMWTVEIFNSLFKSIKRGGVLTTYSCKGNVKRSLEEVGFVVEKLPGPPGKREFL
                     RAWK"
BASE COUNT          737 a          395 c          425 g          732 t
ORIGIN      
        1 tggttcccta tagaatttta tattgacatt gatgaagatg aagccatttg ttatgttgat
       61 ggagtagttg ttgctgaatg gcaatttagc ttacagtctt tcggtgatcc agggactaat
      121 cagttaggtg gtgttaacat ttatgcaggt gcacctacag gtgaaacacc aaaatattat
      181 ttcgataata ttggatatgt tgccgttgac ccaggtattg cagctccaat tattgacgtt
      241 gacccaacat cattttttct aactcttgaa gaaggtgagg taactactga aactatgact
      301 attggtaatc tgggagtaga ggaattaagt tatcaaatag taactactta tcctcaaaca
      361 ggcaaagcat taactgctga accagctggt gcacacacac ctaagaactt acatcaggtg
      421 ataactgctg atcctgatta tagtccatca acaagtaccc cagcatcgcg tgatgtaaca
      481 ttaaactatg atactgaaaa ctttactgct attggaactt ctagtgacta tgaatggaga
      541 gttgctgcaa tgttcccaga tgctatggtt cagccgttta ttggaatgga aattaatgag
      601 atagatgtat ttattaatga tccgggaatt gaatataagg cacaaattta cgatatgggc
      661 tcatataaca cgccaggacc tggtgatctg ttattagaac aatcgtttag tgctaatgct
      721 ggttcatgga atacaataac attagataca ccaatcaagc ttgatggttc tgatatttgg
      781 gtgggatatt ggttatctgc ctatgctgac acatacgtac ctggttgtga tgctggtcct
      841 gctgatccaa atggagactg gatggcattt ggtccaggat ggggtcatct atcagagaac
      901 ccagatttga actacaactg gaatatacgt gcaaacgtaa ctggtgatcc aattattcaa
      961 tggctttcac ctgatcctac taccggcttt ttggttgaaa acgaatttga agatattgat
     1021 attacaattg atgcttcaaa tcttgttgct gaccaatata gtggcaaact caaaattaga
     1081 aataacgacc caactaatga acaagttgac gtatctatta cactaggcgt tcttgttgga
     1141 gttggtgaaa atggagttaa cgagtatatt gcagtatatc caaatcctgc aagtacattt
     1201 ctacatgtaa aatcaaatgg tgaaataaca aatgttcgtt tagtaaatac aatcggacaa
     1261 gttgtgtaca acaactctac tgacgctaat attgacatta gcaatttcga aagaggtgta
     1321 tattttatcc aggttgaaac aaagaatggt acaaacactc aaaaagtctt aattcaataa
     1381 gataattatt taatttgaag cctcgctatt ttagtatata gcgaggcttt ttttattatg
     1441 ttatgaaaaa ttcatcagtt gatctattta acaaattggg tacttctgaa atcctgaaag
     1501 gagtatcaca acctattatt attgcagatc gattacgaac tcccgaaaat attggattaa
     1561 tattaaggtt agcaggcaat attaatgctc tcaatacttt attcatttct gatgaaggac
     1621 ataagttcaa aaaatataaa ataatcaaaa ctgcttcagg ggcagtcact aaagttgatt
     1681 ggaaaatcat caaacctgct gaattagaag attttctccc gaacgattat aaaattgtcg
     1741 cacttgaaac gtgtaaagat gcaagtagta ttttctcttt caaatttcca aaaaaagttg
     1801 catttatggt tgggaatgaa gtacatggta taagcgaaga aatgctttca attgctcatc
     1861 aaaaagttta tatccctgtt ccaggaccta tttcatccct taacgttacg cacgcacttt
     1921 cgatagctct ttttgaatgg ttaaaacaaa ttcaagttta gtctgatatc acttccaagc
     1981 tcttaaaaat tctcttttcc cgggtggtcc aggtagtttt tcaaccacaa aacctacttc
     2041 ttcgagagac cttttaacat ttcctttgca tgagtaggtc gttagtacgc ctcctctttt
     2101 aatcgatttg aataaactat taaaaatttc cactgtccac atttctggtt gagcatctgg
     2161 tgagaaagca tcaaaaaaca caacatcata gacatcagga tggagcttta cgttttcaat
     2221 cttgtcttca actataaata ctgaaaattt gtttgacgaa ttgatgaact tacatttgtt
     2281 atcatgcat
//
LOCUS       DASCQP010000600         1549 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002149144, whole genome shotgun sequence.
ACCESSION   DASCQP010000600 DASCQP010000000
VERSION     DASCQP010000600.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1549)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1549)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1549
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002149144"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..522
                     /locus_tag="QF480_10355"
     CDS             <1..522
                     /locus_tag="QF480_10355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN07005.1"
                     /translation="NKKILPKLYPFEFDGRKYLSFEIAAAMAYKDMSQQYGKSFFVFA
                     AYTNIMARVSYKSKFGIGFGLTHDGSDQLIYERIHATVPSDLHITKIGINIAYELIMD
                     RLSFLFNAGTYLSGMERSESDLYQRLTLKYFITPKLFANMALSAHLGKAEYVGFGLGY
                     QVKFIYKRKIKHE"
     gene            519..1262
                     /locus_tag="QF480_10360"
     CDS             519..1262
                     /locus_tag="QF480_10360"
                     /inference="COORDINATES: protein motif:HMM:NF022441.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head GIN domain-containing protein"
                     /protein_id="HJN07006.1"
                     /translation="MKKLLWLLILALASFTSCKKGTITDCFYSTGKMSNEDRSIDNFN
                     SILLKDNVNLILIKSENNSIKVEAGANLINQIKTDVNEKGVLVIKNDNKCNWIRSYES
                     PITVYLNYIDIDSIEYRSIGDINTLDTLFTDTLWLSINEGAGKINLELNVLRLYCALH
                     YGTADIVLSGKSGLSFVYSASFGLIDMINMETSSMYVNNRSSNDIYLTATTHLGATIE
                     NIGNIYYAGNPLTVDLNRIGSGELIKITE"
     gene            complement(1284..>1549)
                     /locus_tag="QF480_10365"
     CDS             complement(1284..>1549)
                     /locus_tag="QF480_10365"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018964617.1"
                     /note="catalyzes the formation of prolyl-tRNA(Pro) from
                     proline and tRNA(Pro); Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HJN07007.1"
                     /translation="DNIFQKALSFRDENTYNVDTWDEFISRIKQGGFVRAHWDGTSET
                     EMIIKDKTKATIRIIPVDEKQEKGKCILTGNPSIQRVVFAKAY"
BASE COUNT          513 a          235 c          277 g          524 t
ORIGIN      
        1 aataaaaaaa tattacccaa gttataccct tttgaatttg atggaagaaa atatctgagc
       61 tttgaaattg cagctgccat ggcatataaa gatatgagcc agcagtatgg taagagtttc
      121 ttcgtttttg ctgcttatac taacataatg gctcgagttt cttataaaag caaattcgga
      181 attggatttg gtttaactca tgatggttca gatcaactaa tctatgaaag aatacacgcc
      241 actgttccta gtgacctgca tataacaaaa attggaatta acattgcgta tgaacttata
      301 atggaccgat tatctttttt gtttaatgcc ggtacttatt taagtggaat ggaaaggagt
      361 gagagtgatt tgtaccaaag gttaactctt aagtatttca ttactcccaa gctgtttgca
      421 aacatggctt taagtgctca tcttggaaaa gctgaatatg ttggtttcgg actgggttat
      481 caggttaaat ttatttataa acgtaaaatt aaacacgagt gaaaaagcta ctgtggttat
      541 taattctggc tttagcctcc tttacctcct gcaagaaagg aactattacc gattgctttt
      601 actcaaccgg caaaatgagt aatgaggacc gcagtattga taattttaat agtatcttac
      661 ttaaagacaa tgtgaatctc atccttataa aatcagaaaa taatagtatt aaggtggagg
      721 caggtgccaa cctaattaat cagattaaaa cagatgttaa tgaaaagggt gttcttgtaa
      781 taaaaaatga taacaaatgt aactggatta gaagttatga aagtccaata actgtttact
      841 taaattatat tgatattgat tcaattgagt accgttcaat cggagatatt aatacgttgg
      901 atacattgtt tacagatacg ctttggttaa gtattaatga aggtgcagga aaaataaatc
      961 tggaattaaa tgttttaaga ttgtattgtg cattacatta cggaactgca gatatagtcc
     1021 ttagtggaaa aagcggttta tcttttgttt attccgcaag ctttggttta atcgatatga
     1081 ttaatatgga aacaagtagc atgtatgtaa acaaccgaag tagcaacgat atttatttaa
     1141 ctgcaactac acatttaggt gctacaatcg aaaatattgg aaatatttat tacgctggta
     1201 atcctttaac agttgattta aatagaatag gctcaggtga actaattaag attactgaat
     1261 agtgcaaccg tttacctgaa atcttagtaa gctttggcaa ataccactct ttgtatggat
     1321 ggattaccgg ttaaaataca cttacctttt tcctgttttt cgtcgacagg aatgatcctg
     1381 atagtagctt ttgttttatc ctttataatc atttctgttt ctgaggtgcc atcccagtga
     1441 gctcttacaa atcctccttg cttaatccta ctgataaact catcccatgt gtcaacatta
     1501 taagtatttt catccctaaa agataaagcc ttttgaaata tattgtcct
//
LOCUS       DASCQP010000601         2337 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002155406, whole genome shotgun sequence.
ACCESSION   DASCQP010000601 DASCQP010000000
VERSION     DASCQP010000601.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2337)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2337)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2337
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002155406"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            129..1559
                     /locus_tag="QF480_10370"
     CDS             129..1559
                     /locus_tag="QF480_10370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN07008.1"
                     /translation="MILDAGTGENVSLALDENIGDINATEANPEIFKLLQNSFTDQNE
                     VKLHYTVARNFLVSDTSIYDLIQLPIIGSFFGNSGLNAVEPRYELSIEAFSEMWDKLS
                     DKGMICLSSWMDYPPRNTYRLLASIIQLLEEKKVERPNDHIIAIRSWSTVTFLVQKSK
                     FRETQEKQMQQFCHSLMFDPLILPRVKEIFQGEYNTIQDSPFFTNIERLLFAEKKEFL
                     NEYPFRVQPTTDNRPFFFQNLRWRGINQLITTFGESSIPFFELGYILILFTFIQIIFI
                     AAIFIILPLFFKSWKSNNKMWIFVYFGGIGLAFMFIEIVFIQQFTFYFGQPIYATAAS
                     ISILLIASALGSYYSGSIQITKKILILIPLVIAILLLFLTIFLSSILSYTIAASLVVK
                     ILISIVLIGITGFFLGMPFPAGIKYLSEGRQVDIPWAWAFNGYFSVISTALATIISVE
                     TGYVWVLLLAAITYALTGLGSSLLKS"
     gene            complement(1574..>2337)
                     /locus_tag="QF480_10375"
     CDS             complement(1574..>2337)
                     /locus_tag="QF480_10375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009275525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HJN07009.1"
                     /translation="QKYPLIVLPHGGVHADFTTYYTHIVRELIAQGYIIVAAEYRGST
                     GYGESHYKKIDYGGLETEDVYASRNYMIENYDIVDGNRVGIIGWSHGGLIALFNIFDH
                     PESYQVAYAGVPVCDLIARMGYKDQEYRDLYEADYHIGESADDNVEEYKRRSPAWNTH
                     KMKDTPLLIHTNTNDADVNVLEVEHLIKSLKADDKKFEFKIYQDIPGGHSFNRTDTKK
                     ALEIRVGIYEFLAKQLNPPNPIENVKELRKAAYRY"
BASE COUNT          703 a          443 c          397 g          794 t
ORIGIN      
        1 agcagcagca aaggtcattc caccgccaat aattatcgct gccaaataag caccgttagt
       61 ccagcttaac cattctaaat tatacaactc aatcccttcc ttattatatt gaaaaaatta
      121 ataatgtttt gatcctagat gctggaacag gagaaaatgt atcattggca ttggatgaaa
      181 atatcggtga tattaatgct acagaggcaa atcccgaaat ttttaagcta ctccaaaatt
      241 cttttactga tcagaatgaa gttaaacttc actatacagt agctcgaaac tttctggttt
      301 ctgacacatc tatatatgat ttgatccagc tcccaataat aggttcgttc tttggtaatt
      361 cagggcttaa tgctgttgaa ccccgttatg aattaagcat tgaggctttt tctgaaatgt
      421 gggacaagct atcggataaa gggatgattt gccttagtag ttggatggat tatccaccaa
      481 gaaatactta tagattgttg gccagtataa tccagcttct agaagaaaaa aaagtagagc
      541 gtcctaatga ccatataatt gctattagga gttggagtac tgttactttc ttagtacaaa
      601 aatcgaaatt cagagaaact caggaaaaac aaatgcaaca gttctgccat agtttgatgt
      661 tcgatccttt aatactaccg agggttaaag aaatattcca aggagagtat aatactattc
      721 aggatagtcc atttttcacg aatattgaaa ggcttttatt tgcagaaaaa aaagagtttc
      781 ttaatgaata tccttttcgt gtacaaccta ccacagataa tcgaccgttt ttcttccaga
      841 atcttcggtg gagaggtatt aatcaactaa ttactacttt cggagagagt agcatccctt
      901 tcttcgaact tgggtatata cttattcttt tcacatttat tcagattatt ttcatcgccg
      961 ctatttttat tattcttcct ctatttttca aatcctggaa aagcaataat aaaatgtgga
     1021 tttttgttta ttttggtggg atagggctgg catttatgtt catcgagatt gtttttattc
     1081 agcaatttac attctatttc ggccaaccaa tttatgcaac agcagctagc ataagcattc
     1141 tccttattgc atctgctctg ggaagttatt attcaggttc aatacaaatc acaaaaaaaa
     1201 tactgatact cataccactt gtaatcgcaa tattgttgct gttccttacc atcttcttat
     1261 cgagtatatt atcatacaca attgcagcat cgcttgtcgt aaaaatttta atctcaatag
     1321 ttttgatagg tattactggt ttctttcttg gaatgccttt tccggccgga ataaaatatt
     1381 tgtcagaagg caggcaagta gacataccat gggcatgggc atttaatgga tatttttcgg
     1441 ttataagcac tgctctggct accattattt cggtggaaac tggttatgtt tgggtgttgc
     1501 ttttggcggc aattacttac gctttaaccg gcctggggag ctcattgctg aaaagttgat
     1561 ttctaatctc acgttagtaa cgataagcag ctttgcgtag ttccttcaca ttttcaatag
     1621 gattaggtgg atttaattgc ttcgcaagaa actcataaat cccaactctt atttccagag
     1681 cctttttagt gtctgttctg ttaaaagagt gtccccctgg aatatcttga tagattttaa
     1741 attcgaactt tttatcatcc gctttcagcg atttaattaa atgctcaact tcaagtacat
     1801 taacatcagc atcatttgta tttgtatgga ttagtaaagg tgtatctttc atcttatgag
     1861 tattccatgc cggagatcgc cttttgtatt cctcaacgtt atcatctgca ctctcaccta
     1921 tgtggtaatc agcttcgtag agatctctat actcttgatc tttgtagccc atacgtgcaa
     1981 ttaaatcaca aaccggcact cctgcatatg caacctgata tgattcggga tgatcaaaaa
     2041 tattgaataa agcaatgagt cccccatggc tccagccaat aataccaact cgatttccgt
     2101 caacaatatc ataattttca atcatataat ttcttgaagc ataaacgtct tcagtttcta
     2161 acccaccata atctattttt ttgtaatgac tttctccata acctgtgcta cccctatatt
     2221 ctgcagcaac aataatataa ccttgagcaa taagttctct tacaatatgt gtataataag
     2281 ttgtaaaatc agcatgaacg ccgccatgag gtagtacaat aagaggatac ttttgtg
//
LOCUS       DASCQP010000602         3575 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002156295, whole genome shotgun sequence.
ACCESSION   DASCQP010000602 DASCQP010000000
VERSION     DASCQP010000602.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3575)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3575)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3575
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002156295"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            150..440
                     /locus_tag="QF480_10380"
     CDS             150..440
                     /locus_tag="QF480_10380"
                     /inference="COORDINATES: protein motif:HMM:NF017103.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF721 domain-containing protein"
                     /protein_id="HJN07010.1"
                     /translation="MTSNNENSLKDVLQMLFDSYGWTEKMDGIRVVNLWEKVVGGIIA
                     KHTTNKYVKDGIFYVAVDSSVLRNELYMKRSSIVKELNDEMGKKVIKEIIFN"
     gene            455..1267
                     /locus_tag="QF480_10385"
     CDS             455..1267
                     /locus_tag="QF480_10385"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019246173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004731 - purine-nucleoside phosphorylase
                     activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HJN07011.1"
                     /translation="MHQKIQETTNYLVSKGVEKAQIGIILGTGLGNLVNHVDIKVSLD
                     YSEIPNFPEATVESHSGKLIYGTIEGQKVILMSGRYHYYEGYTLQEVTFPVRIMKMLG
                     IHTLLVSNACGAVNPAFPKASLMIIDDHINMIPGNPLIGINHSKLGPRFVDMSMPYDA
                     SLITKMEAIAERCDIVINKGVYVAWSGPSLETRAEYRFIKFMGADVVGMSTVPEVIVA
                     NHAGLKVAAVSVITDLCDPDNLQAVELSEMLENAAKAEKDLIVLFKELIKEI"
     gene            complement(1429..2079)
                     /locus_tag="QF480_10390"
     CDS             complement(1429..2079)
                     /locus_tag="QF480_10390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013612385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4159 domain-containing protein"
                     /protein_id="HJN07012.1"
                     /translation="MRNIWLLIALIGILNISKAQEVSIALLKYSGGGDWYANPTSLPN
                     LIKFCNKNLHTAISIDVPAINIGSSELFNYPFTHLTGHGNIIFSPDEAENLRKYLISG
                     GFLHISDNYGLDEFIRREMKKVFPVIEFVELPSNHPIYHQKYDFNNGLPKIHEHDDKD
                     PQGLGLIYDGRLVCFYDYECDLGDGWEDEEIHDDSFEKRQEALKMGANMIQFVFEQ"
     gene            2297..2839
                     /gene="rfbC"
                     /locus_tag="QF480_10395"
     CDS             2297..2839
                     /gene="rfbC"
                     /locus_tag="QF480_10395"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013064752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008830 - dTDP-4-dehydrorhamnose
                     3,5-epimerase activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HJN07013.1"
                     /translation="MEIIKTKIPDLYIIKPSVFEDNRGYFFESYNKEAFMRSGIDQNF
                     VQDNESKSGKGVLRGLHFQRPPYDQGKLVRVMHGAVLDVAVDLRRSSATYGEWVSVEL
                     NHENKWMYWIPPGFAHGFVTLEDNTVFFYKCTKVYNKESEGSIYWNDPDLNIDWKVDN
                     PILSEKDMNGPSFKDFVTPF"
     gene            2952..>3575
                     /locus_tag="QF480_10400"
     CDS             2952..>3575
                     /locus_tag="QF480_10400"
                     /inference="COORDINATES: protein motif:HMM:NF013618.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HJN07014.1"
                     /translation="MNRIVTYIFIIIAIILLIYGFDKLIRNKQSQLPGTNEQYYKIVS
                     VRLPDTLYLAGEEMPLDIFYVREALDQELSVNTYWHSATLQLIKKSYRWFPLFDSILN
                     VNGIPVDFKYIAVIESGLTNAISPSGAVGYWQFLKGTAKEMGLEINKEVDERYHIEKS
                     TEAACKYFLESYEKFGNWTLVAAAYNAGNKGITRQLERQKSGSYYDLL"
BASE COUNT         1224 a          569 c          655 g         1127 t
ORIGIN      
        1 ttcaagaaaa gtaaacaatg aattcggaat atggaatact gaatatcgaa tcttgaaatg
       61 ggaactaatc acacttcaac attcagcatt tagagttcaa tatttgacat tcaaaaaata
      121 tttaataaac atcatatact taatctttta tgacaagtaa caacgaaaat agcttaaaag
      181 atgtattgca aatgcttttt gattcctatg gctggactga aaagatggat ggaatacgag
      241 tggttaatct ttgggaaaaa gttgttggtg ggataattgc gaaacatact actaataagt
      301 atgtaaagga cgggattttt tatgttgcgg tagattcctc agtacttcgg aatgagcttt
      361 atatgaagcg ttcatcaatt gtaaaggagc ttaatgatga gatgggaaag aaagtaatta
      421 aagagataat atttaactag tataaattta cgtaatgcac caaaaaatac aagaaacaac
      481 taactattta gtcagtaaag gggttgagaa agctcaaatt ggaataattc tgggcaccgg
      541 tcttggaaat ctggttaatc atgttgatat caaagtaagc ctggattaca gtgaaatacc
      601 aaattttccg gaagcaactg ttgaatctca ttccggaaag cttatttatg gaacaattga
      661 gggacaaaag gtaattttaa tgagtggaag atatcattat tatgaaggtt atacattaca
      721 agaagtaact ttcccagtac gtataatgaa aatgttgggt atacatactt tgctcgtatc
      781 aaatgcatgt ggagctgtaa atcctgcctt tcctaaagcc tccttgatga taattgacga
      841 ccatattaac atgattcctg gaaatccttt aattggcata aatcattcca aactcgggcc
      901 tagatttgta gatatgagta tgccttatga tgcctcccta ataacgaaaa tggaggctat
      961 tgcagaaaga tgtgatattg taattaataa aggtgtttat gttgcatgga gtggtcctag
     1021 tcttgaaaca cgagccgaat atcggtttat aaagtttatg ggggctgatg ttgttgggat
     1081 gtcaacagtt cctgaagtaa ttgtggcaaa tcatgccggc cttaaagtgg cagcagtttc
     1141 cgttataact gacttgtgcg atcctgataa cctgcaagct gttgaactct ctgagatgct
     1201 cgaaaatgca gctaaagcag aaaaagatct aattgtatta ttcaaagaac taataaaaga
     1261 aatttaaata acagtatttt cgacaatatc ctaaactata ggcatgacac aaaccaaaac
     1321 catataaata agtaagtgaa aaggcttgtt attatttgca atagataata ctccaattac
     1381 ttttaaaata ctaactaatt agctataacc ggctccattt cttacaaatt actgctcgaa
     1441 aacaaattgg atcatattgg cgcccatttt caaggcttcc tgtctttttt caaacgaatc
     1501 atcatgaatt tcttcatctt cccagccatc accaaggtcg cactcataat cataaaaaca
     1561 tactaatcgc ccgtcataga ttagccccaa tccttgagga tccttatcat cgtgctcatg
     1621 aattttcggc aaaccgttat tgaaatcata tttttgatgg taaataggat ggttagaagg
     1681 aagttcgaca aattcaatta ccgggaaaac ttttttcatt tccctgcgaa taaattcatc
     1741 aagtccataa ttatcggata tgtgcaagaa accacctgag atgagatatt ttcttagatt
     1801 ctcagcctca tcagggctga atataatatt tccgtgtccg gttagatgag taaagggata
     1861 gttaaacaat tcactacttc caatattaat tgccggtaca tcaatactta ttgcagtatg
     1921 aaggttctta ttacaaaatt taataagatt tggtagagat gtggggtttg cgtaccagtc
     1981 gccacctcca ctatatttaa gaagagctat actaacttct tgagctttgc tgatattaag
     2041 tattccaatc aatgctatca gcaaccatat atttctcatc taacttctaa ttttacggag
     2101 taaccaatca ataattggtt taaaatattc tatcttcaaa agtggcaaat ttatcaatta
     2161 taacgtatgc gccaatagtt tcgtttaaca ttttagacta tattctggta ctaaacatca
     2221 ctttagcgat agcaatccaa cctttaatag atcatagaaa atattatctt tacctactca
     2281 aatatcacaa tacggaatgg agattataaa aaccaagata cctgatctat atattataaa
     2341 accaagcgtt tttgaggata acagaggata ttttttcgaa tcatacaaca aagaggcgtt
     2401 tatgaggagt ggtattgatc agaattttgt tcaggataac gaatcaaaat caggtaaagg
     2461 tgttctaaga ggattacatt ttcagaggcc gccatatgat cagggaaagc tcgtaagagt
     2521 tatgcatgga gcagtacttg acgtagctgt tgatttaaga agatcatcag cgacttatgg
     2581 cgagtgggtt tctgttgaac tcaatcatga aaataaatgg atgtactgga tcccccctgg
     2641 ttttgcacac ggatttgtta ctttggaaga taataccgtt ttcttttata agtgcacaaa
     2701 agtatataac aaagagtcgg aaggaagcat ttattggaat gatccggatc tgaatattga
     2761 ttggaaagta gataatccta ttttatcgga aaaagacatg aatggtccat catttaagga
     2821 ttttgttact cctttttaag tgtttgattt ctgattgaat tctgaatata tttcatctta
     2881 acaaactgtt cacacctagc accctcttat ttattatgtt tgcagtttct taaagtaatt
     2941 tcacaaaaac aatgaatcga attgttacct atatatttat aattattgca attatattgt
     3001 tgatctatgg cttcgacaag ctaattagaa ataaacaaag tcaattaccc ggtacaaatg
     3061 aacagtatta caagatagtt tcagtgcgtc tgcccgatac tctttacctg gcaggtgaag
     3121 aaatgccatt agatattttt tatgttagag aggcactgga tcaggagtta tcagttaata
     3181 cctactggca ctctgcaaca cttcagctta taaaaaaatc atacagatgg tttcctctgt
     3241 ttgattcaat acttaacgtt aatggaatac ctgtagattt taaatacatc gccgttattg
     3301 aaagtgggtt aacaaacgct atttcacctt ccggagcagt tggttattgg cagtttttga
     3361 aaggaacagc taaagaaatg ggattagaaa tcaacaaaga agttgatgaa agatatcata
     3421 tagaaaaatc tactgaagct gcatgtaagt acttccttga aagttatgag aagtttggca
     3481 actggacatt ggttgcggcg gcgtataatg caggtaataa aggtattaca agacaattag
     3541 aaagacaaaa atctggctca tattatgatt tatta
//
LOCUS       DASCQP010000603         2372 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002158596, whole genome shotgun sequence.
ACCESSION   DASCQP010000603 DASCQP010000000
VERSION     DASCQP010000603.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2372)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2372)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2372
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002158596"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(56..1183)
                     /locus_tag="QF480_10405"
     CDS             complement(56..1183)
                     /locus_tag="QF480_10405"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HJN07015.1"
                     /translation="MNIRKTIITIGVVVFAIFLAVLLSKYFVDRKEIPESREKEEAKL
                     YVKASPVIYNVNYAGVSATGRLSSQHAVELSAEVAGQVLSGNILLKEGATFRKGDLLV
                     QIFDDEARSNLKASKSRFLNGIAGILPDMKIDFPHSYTTWSDFFNAINISKPLPDLPQ
                     IDSDKEKVFLASRNILSDYYTIQSAEIRLEKYKIYAPFNGTFTNVMMEVGSVANPGSR
                     IATMIKTDKLELEVPVKIDDIYWINVGDNVKASTKDGLYTWNGKVVRKSDYVDPNSQS
                     ITVFVALESTKSKPLYQGQYLKAVFAEQNLDESMEIPRNAIFNKEFVYTIDEGKLKKQ
                     RVNILKTNETSVLFSGLEPGTMIVVEPLVNAQEGTNAEILK"
     gene            1395..>2372
                     /locus_tag="QF480_10410"
     CDS             1395..>2372
                     /locus_tag="QF480_10410"
                     /inference="COORDINATES: protein motif:HMM:NF013715.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HJN07016.1"
                     /translation="MKNFFKILGPGLLYAGAAVGVSHLVQSTRAGAMFNFDLVWILII
                     ANFLKYPFFEFGPRYANATRSNLVDGYKKVGRWAVILFALVTVGSMFIFQAAVTVVTV
                     GLISYVFNVTISITTLSIIILLISAVILVIGKYNLLDKVIKFIILLLAVSTIVAVFAA
                     FGIQKEVTPEALNQFSLTRGADIFFLIAFIGWMPAPIELSVWSSAWNIAKTEQLGYVP
                     KLKDAITEFRISYIGTTLLAMGFLAMGALVMYGTGEEFSSSGTRFSEQLINMYTTSLG
                     SWAYWIVSIAATTTMISTTITVMDGYPRVLSPIFRNLFPVQWNGLKNKQI"
BASE COUNT          742 a          407 c          409 g          814 t
ORIGIN      
        1 catcacattg gcataaaagg ggtatttaac aaaaatacta atgagcttct tcatattatt
       61 tgaggatttc agcgttagta ccttcctgag catttaccaa gggttcaact acaatcatgg
      121 ttcccggttc taaacctgag aataataccg aagtttcatt tgttttaagg atattaaccc
      181 tttgtttttt caattttcct tcatcaatag tatacacaaa ttccttgtta aatatggcat
      241 ttcgaggaat ttccatactt tcatctagat tttgttcagc aaataccgct tttaaatatt
      301 gcccctgata aagtggtttt gattttgtag attctaaagc tacaaaaaca gtaatggatt
      361 gtgaatttgg atccacatag tcggatttac gaaccacttt tccattccag gtatatagtc
      421 catcttttgt gcttgcttta acattatcgc ctacatttat ccaataaatg tcatctatct
      481 ttacaggaac ttcaagttca agtttgtcag ttttaatcat cgttgcaata cggctacctg
      541 gattagcgac tgacccaact tccatcataa cgttggtaaa agtgccatta aaaggagcat
      601 aaatcttata tttttccaat ctgatttcag cactttgaat cgtataatag tcactcagga
      661 tattacgact agccagaaaa actttttctt tatcagaatc aatttgagga agatcaggta
      721 atggtttgct gatattaatt gcattaaaga aatctgacca tgtagtatag ctatgaggaa
      781 aatcaatttt catgtcagga agtatgcctg caatgccatt taaaaaacga cttttacttg
      841 ctttgaggtt gctcctggcc tcatcatcaa atatttgcac taacaaatca cctttcctaa
      901 atgtggcacc ttcttttaaa agtatatttc cagacaacac ctgtccggct acctcagcac
      961 taagctccac cgcgtgttga gatgataacc gaccggttgc agatactccg gcataattaa
     1021 cattgtaaat aacaggcgat gcttttacat acaactttgc ttcttccttt tctcttgact
     1081 caggaatctc ttttctatca acaaaatatt tagacaggag cactgccaaa aagatggcaa
     1141 aaacaactac accaatagta attatagttt tacgaatatt catgattaaa tgatttaaaa
     1201 gaaggataat aacacttgtg caattttaag aaataatcgt ttcacgaaaa tagtttatta
     1261 attcctatag ggatgtaaaa ttcaatgtat agttgttatt tattcattac ttttccatga
     1321 agagttgaat cggacttatt aatgaaaata atacatttgc atactaaatt cacaaaataa
     1381 taaaagtata ataattgaaa aactttttta agatattagg accaggcctg ttatatgcag
     1441 gtgcagctgt tggagtatcg catcttgtac aatctactcg tgcaggtgca atgttcaatt
     1501 tcgatttagt gtggatattg ataatcgcta attttttgaa ataccctttt tttgaatttg
     1561 ggcccagata tgctaatgcc acaagatcta atcttgttga tggatataaa aaagtaggac
     1621 gatgggctgt aattcttttt gccctggtta cggttggctc gatgtttatt tttcaagctg
     1681 cagtaacagt ggtaacagtt ggattaattt cctatgtttt taatgtaacg atcagtatta
     1741 caacattgag cattataata ttgcttattt ccgcagttat tctcgtaata ggtaagtata
     1801 atcttctgga taaggttatt aaatttataa ttttattatt agcagtttca acgatagttg
     1861 ccgtttttgc agcttttggg attcaaaagg aagtaacacc agaggcatta aatcagtttt
     1921 cattgactcg tggggctgat atatttttcc tcattgcttt tatagggtgg atgcctgctc
     1981 caattgaatt gtctgtctgg tcatcagcat ggaatattgc caaaaccgaa caactgggtt
     2041 atgttccgaa attaaaggat gcaataacag aatttagaat aagctatatt ggaactacat
     2101 tgttagctat gggatttcta gcaatgggcg ccttggtaat gtacggaact ggtgaagagt
     2161 tttcttcaag tggaacaagg ttttcagaac aacttataaa tatgtacacc actagcttgg
     2221 gaagttgggc ttactggatt gtatcaatag ctgctactac aacaatgatt agtactacaa
     2281 ttacagtaat ggatggctac cctcgcgtat taagtccgat atttcgtaat ttatttccag
     2341 ttcaatggaa tggtctcaaa aacaaacaaa ta
//
LOCUS       DASCQP010000604         2821 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002169946, whole genome shotgun sequence.
ACCESSION   DASCQP010000604 DASCQP010000000
VERSION     DASCQP010000604.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2821)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2821)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2821
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002169946"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1125)
                     /gene="menD"
                     /locus_tag="QF480_10415"
     CDS             complement(<1..1125)
                     /gene="menD"
                     /locus_tag="QF480_10415"
                     /EC_number="2.2.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR00173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070204 -
                     2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-
                     carboxylic-acid synthase activity [Evidence IEA];
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-succinyl-5-enolpyruvyl-6-hydroxy-3-
                     cyclohexene-1-carboxylic-acid synthase"
                     /protein_id="HJN07017.1"
                     /translation="MTSTKKNISLLADIFVKHGLTDIVISPGSRNAPIILSFANRPEI
                     NAFSIVDERSAAFFAIGLALNSKKTIAIACTSGSAALNYSSAISEAYYQKIPLLVITA
                     DRPEQFIDIGDGQTIRQKNVYANFIKKSYQLPLTVDSKDKFKAAEETINEALHYCTFP
                     QPGPVHINIPFNEPIYGTTEEPVSGRLIKLETNSLTISESLLKKIAASCSNSSKVMII
                     AGQSKTNDRLSNSIEKISHNQNVVVLTETTSNITGFDCIDTIDNVVSTIYKKESELFK
                     PEILISFGGQVVSKMIKKFLRKNKPQFHWHISPSGEKMDTYFSLTESVNSNENEFFNS
                     LYQYINPLDSNYSNLWHNRKNEVNRKKEEFLSRAKYSDLKV"
     gene            complement(1137..2240)
                     /locus_tag="QF480_10420"
     CDS             complement(1137..2240)
                     /locus_tag="QF480_10420"
                     /inference="COORDINATES: protein motif:HMM:NF012640.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate-binding protein"
                     /protein_id="HJN07018.1"
                     /translation="MINSILEIPQMLIKKGLPFAIYCLPSKKKFNLIFQKDVSLHEID
                     ILDIEQTNGFVIANFESAKTGLVNIIKPDYVLSEDENITEIVGFLDTLPDIGNFYFEN
                     NYCISKADYLDRADYLINQLKDGYLKKVVFSRVIHKKLKEELKLNQLLSMLKEKYNNA
                     FINLFHLPGIGTWCGATPETLFKKVDNYVITDAMAGTQLLDEDSENITWTNKEKEEQH
                     LVSLFIESNLSELGIHDFDKVGPINVSAGHIAHIQTQFKIPFSSLNEKEGKFIASLHP
                     TPAVCGLPKAEAYLMIHKAEQHQRRYYTGFLGPWKLANQSQLFVNLRCAELDTNKINI
                     YVGGGLTASSSNKDEYKETVYKSKTLLSIVENL"
     gene            complement(2237..2653)
                     /locus_tag="QF480_10425"
     CDS             complement(2237..2653)
                     /locus_tag="QF480_10425"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013445050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016790 - thiolester hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HJN07019.1"
                     /translation="MELGKLTIEQLNVLNKGTMMEQLEIEYLEVGEGRITAQMPVNEK
                     TFQPEGILHGGANLALAETIAGLGSALLVDLNKFSVRGAQISANHVGSTNKGYVLATG
                     NIIHKGTNTHVWSIDITDDQNTLLSTCRITNIIVKK"
BASE COUNT          829 a          494 c          453 g         1045 t
ORIGIN      
        1 tactttaagg tctgaatatt tggctcttga aagaaattct tccttttttc tgttaacttc
       61 atttttcctg ttgtgccaca ggttggaata attgctatca agaggattaa tgtattgata
      121 aagtgaatta aagaattcat tttcattgga attaaccgac tcagtaagac taaaataagt
      181 gtccattttt tcacccgatg gtgatatatg ccaatggaac tgtggcttgt tttttctcaa
      241 gaatttttta atcatcttag aaactacctg tcccccaaaa ctgataagga tttcaggctt
      301 gaaaagttca gattcttttt tatagatggt cgacactaca ttatcgatag tatctataca
      361 atcaaaccct gtaatattag aggttgtttc agttagtaca actacgtttt ggttgtgaga
      421 aatcttttca atactattgc ttaacctatc gttggttttt gactgtccgg ctattatcat
      481 aaccttacta ctattgctac aactagcagc aatttttttc aaaagtgatt ctgaaatagt
      541 taaactgttt gtctctaatt tgattaatct tccagaaact ggttcttcgg ttgtaccata
      601 aattggttca ttaaatggaa tgttaatgtg aaccgggcct ggctgtggaa atgtgcaata
      661 atgaagagct tcatttattg tttcttcagc ggctttaaac ttatcttttg aatctacggt
      721 taatggcaat tgataacttt tttttataaa attagcatat acattttttt gtctgattgt
      781 ttgtccatca cctatatcta tgaattgttc aggacgatca gcagtaatta ctaaaagtgg
      841 aatcttctgg taataagctt cagagattgc agatgaataa tttaatgctg cacttcctga
      901 ggtacatgca attgcaatag tttttttaga attcaaagca agtccgatag caaaaaatgc
      961 agcactacgc tcatcaacaa tactaaatgc gtttatttca ggcctgtttg caaaacttag
     1021 tatgattggt gcattacgtg aacctggtga tattactatg tctgttagcc catgtttgac
     1081 aaaaatatca gctagaaggc ttatgttttt tttagtagaa gtcattatgc aaatctctac
     1141 aaattttcta caatcgacaa gagagttttc gacttataca ctgtttcttt atattcatct
     1201 ttattgcttg atgaagcggt gaggccgcca cctacataaa tgtttatttt attagtatct
     1261 aattcggcac atctgaggtt tacaaataat tgtgattggt ttgccagttt ccatggtcct
     1321 aaaaatcctg tataatatct cctttggtgt tgttcggctt tatgtatcat caaatatgct
     1381 tctgcttttg gcaatccaca tacggctggt gtaggatgta agctggcaat aaacttccct
     1441 tccttttcat ttaatgatga aaagggtatt ttaaattgag tttggatatg agcaatatgt
     1501 ccggcactaa catttattgg ccctacttta tcaaaatcat gaatgccaag ttctgataaa
     1561 ttagactcaa taaataacga aactaagtgt tgttcttctt tttctttatt agtccaggta
     1621 atattctcgc tatcttcatc aagcaattga gtgcccgcca ttgcatctgt aataacatag
     1681 ttatcaactt ttttaaacaa agtttcagga gttgcaccac accatgttcc tatacctggt
     1741 agatgaaata aattgataaa tgcattatta tacttttcct ttaacatgct aagaagttga
     1801 tttaacttta actcctcttt aagcttttta tgaatgactc tggaaaaaac aactttcttt
     1861 agatatccgt cctttagctg attaattaaa tagtctgctc tatctaaata atccgctttt
     1921 gaaatacaat aattattttc aaaatagaag tttccaatat cgggtagtgt atctagaaaa
     1981 cctactattt cagttatatt ttcgtcctca ctaagtacat aatcaggctt aataatattt
     2041 actaagccag ttttagcact ttcgaagttt gcaataacga agccattagt ttgctcaata
     2101 tcaagtatat ctatctcatg aagactaaca tctttctgaa agatcagatt aaatttcttt
     2161 tttgagggca agcaatatat ggcaaaaggt aatccctttt tgatcagcat ttgtggtatc
     2221 tcaagtatgc tgtttatcat ttcttaacaa taatattcgt tatcctgcaa gtcgataaca
     2281 gggtattttg gtcgtctgta atgtcaatac tccaaacatg tgtattagta cctttatgga
     2341 taatgttccc agttgctaat acataacctt tatttgtact tccaacatgg tttgcactta
     2401 tttgagcacc tctcactgaa aatttattaa gatctaccaa taatgctgaa cctaatcctg
     2461 cgatggtttc agctagagca agatttgcac caccgtgtaa tatgccttct ggttgaaaag
     2521 ttttttcatt aaccggcatt tgagcagtta ttctaccttc gccaacttca agatactcaa
     2581 tctccagttg ctccatcatc gtacctttgt taagtacatt tagttgctca atagttaatt
     2641 ttcctagttc cattgttgct ttttttcgga atgtcaaaaa taagggtaat aatatcttgt
     2701 ttgtactttt tatagttata atgttagcta ccccaacttt tccggtccag gctccgatat
     2761 tgaatggctt ctatcagatg ttcggtcata atatcaatcg aactatcaag gtctgcaatt
     2821 g
//
LOCUS       DASCQP010000605         3268 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002171288, whole genome shotgun sequence.
ACCESSION   DASCQP010000605 DASCQP010000000
VERSION     DASCQP010000605.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 3268)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3268)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3268
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002171288"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..2352)
                     /locus_tag="QF480_10430"
     CDS             complement(<1..2352)
                     /locus_tag="QF480_10430"
                     /inference="COORDINATES: protein motif:HMM:NF012356.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HJN07020.1"
                     /translation="MKKLLGSFLLSLFITSTTLAQLISADPAFPTENDQVIITFNSSL
                     GSGGLAGFTGDVYAHTGVITSNSSSGSDWKYVKAGWNENIPECKMTMIGDDLWELTIG
                     PSIKEYYGVPANETILQMAFVFRSADGSLEGKTEDGGDIFYDVYTSGLNIMITLPAQR
                     PTIVELNDNILVEGSSNGADSTFIFVDGELIYTDVGNTFSTNITASTIGKHWIVATAI
                     NDNETASDSLYYYVRQETIVQELPPGIIDGINYTSEESVVFSLVAPEKEYIFVLGDFN
                     NWEIGTEYEMKVTPDGQRFWLEISGLEPGKEYVFQYFIDGSIRVGDPYADKVSDPWND
                     QWISNTTYPDLIEYPAGKAFGIASVLQTNQDPYQWQINDFENPPATDLVIYEMLVRDF
                     LAAHDFATLTDTLDYLEKLGVNAIELMPNNEFEGNSSWGYNPNYYFAPDKYYGPKNTF
                     KAMVDECHARGIAVFMDIVLNHSYGTNALVMMYWDGPNNRPAANNPWFNVESNFLNPD
                     AHWGNDFNHESLYTQQFIDSVNSYWINEYHIDGFRFDFTKGFGNNIKGNDDPWGSNYD
                     ADRIALLKRMADKIWEQKSDATIIFEHLAENSEEKVLANYGILLWGNSNYNYNEATMG
                     YNNGGNSDFSWISYKKRGWNHPHVVGYMESHDEERLMFKNLEHGASNGNYNIKDLPTA
                     LKRQELAANFFFTIPGPKMIWQFGERGYDVSIDFNGRLGEKPPKWNYLQDWRRRNLMY
                     VYSALIDLKKNEDVFSTNDYSLDLYSALKKIRLNSTEMSVVVIG"
     gene            2978..>3268
                     /locus_tag="QF480_10435"
     CDS             2978..>3268
                     /locus_tag="QF480_10435"
                     /inference="COORDINATES: protein motif:HMM:NF025006.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HJN07021.1"
                     /translation="MVKQLTTKLLLFAVVLLSSLTMFAQSGAVSGVVTDAGDGTSLPG
                     ATIVIKGTTQGAVTNIDGNYTINVEPNQVLIFSYVGYATQELVVQPNTTVNVA"
BASE COUNT         1042 a          595 c          524 g         1107 t
ORIGIN      
        1 cccaattact accactgaca tctctgttga attaagtcta atctttttta aagcagaata
       61 aagatcaagg gaataatcat ttgtactaaa aacatcttca ttttttttaa gatctataag
      121 agcggaataa acatacataa gattccttcg tctccaatct tgaagataat tccatttagg
      181 aggtttttct cctaatcggc cattaaagtc aatagataca tcgtagcccc tctcaccaaa
      241 ttgccagatc atttttggtc ctggaatcgt aaagaagaaa ttcgcagcta gttcttggcg
      301 ctttaatgca gttggaagat ctttaatgtt ataattacca ttcgaagctc catgttctaa
      361 gtttttgaac ataagccgct cttcatcatg actttccatg taacctacaa catgagggtg
      421 attccatcct cgctttttgt aagaaatcca tgaaaagtcg gagttcccgc cattgttata
      481 acccatggtt gcctcattgt aattatagtt tgaatttccc cagagtagta ttccgtagtt
      541 tgcaagcact ttttcttcac tgttttcagc aagatgttca aatattatgg tagcatctga
      601 tttttgttcc catattttat ctgccattct tttaagaaga gcaatcctgt cagcgtcata
      661 attactaccc caagggtcat catttccttt tatattatta ccaaagcctt tggtgaagtc
      721 aaatctgaaa ccgtcaatat ggtattcatt gatccaataa ctgtttacgc tgtcgataaa
      781 ttgttgtgta tataaacttt catgattgaa atcattaccc caatgagcgt cagggtttag
      841 aaaattgctc tctacattaa accatgggtt attagctgct ggcctgttat ttggtccatc
      901 ccaatacatc attactaatg catttgttcc gtatgagtga ttaagaacta tatccataaa
      961 aacagcaatg cctcttgcat gacactcatc caccattgct ttaaatgtat tttttggccc
     1021 ataatattta tcgggagcaa agtagtaatt aggattgtaa ccccaacttg aattaccttc
     1081 aaattcattg tttggcataa gttcaattgc atttacaccc aacttctcta aataatcaag
     1141 agtatcagta agagtagcaa aatcgtgtgc tgccagaaaa tccctcacaa gcatttcata
     1201 tataacaagg tcagtggcag gaggattttc aaaatcattg atctgccatt gataaggatc
     1261 ttgattagtt tgcagaacac ttgcaatacc aaatgctttt ccagctggat attcaattaa
     1321 atcaggataa gtagtattac ttatccactg atcgttccaa ggatcgctta ctttatcagc
     1381 gtaaggatcg ccaacccgaa ttgatccgtc aataaaatat tgaaaaacat attcttttcc
     1441 aggttccaat cctgatatct caagccagaa tctttgcccg tcaggggtta ccttcatttc
     1501 atattcagtg ccaatttccc agttgttaaa atctcctagc acaaaaatat attccttctc
     1561 gggtgctact aaagaaaaaa cgactgactc ttcagaagta taattaattc catctattat
     1621 tcccgggggt aattcctgaa caattgtttc ctgtcgaaca tagtaataaa gtgaatcact
     1681 agctgtttcg ttatcattta ttgccgttgc aacaatccag tgttttccta tagtggatgc
     1741 agttatgttt gtcgagaatg tattaccaac atcagtataa ataagttctc catcaacaaa
     1801 aataaaagtt gaatcggcac cgttactgct tccttcaact aatatattat catttaactc
     1861 aacaatagtt ggtctttgcg caggtagagt aatcataata tttaacccgg aagtatatac
     1921 atcataaaaa atatcaccac catcttctgt tttaccttca agcgatccat ctgcgcttcg
     1981 aaatacaaat gccatctgaa gaattgtttc gttggccgga acaccgtaat actctttaat
     2041 agaaggtcct attgttaatt cccacaggtc gtctccaatc attgtcatct tgcattcggg
     2101 gatattttca ttccatcctg ctttaacgta tttccagtca gaacccgacg aactattact
     2161 ggtaattaca cctgtatggg cataaacatc tccggtaaag cccgctaatc caccactacc
     2221 gagtgaagaa ttgaaagtaa taattacttg atcattctca gttggaaaag ctggatcagc
     2281 cgaaatcaat tgggctaaag ttgtagaagt tataaataat gaaagcaaaa aacttccaag
     2341 tagttttttc atcgtgattt tatttatatg atacaaaagt acctgaaaaa gttgcagtag
     2401 taacttaata atagttaaaa taccataaaa tcagggatat atgatattaa gggattgtat
     2461 aagtgttagt gcaatcgtat gcagatgttt attatttttt aataaagttc ctaggttttg
     2521 agctagccta aagaataaga aattaataga tgggatattt cgctccatat atgatataag
     2581 gttatcccaa ttagacaatc gtatgcattc atctgtaaaa taatataggt gtgttcatga
     2641 gatcctgttt tttcgcaatc gattgcattt tttacattaa aataccttat gattatgtaa
     2701 attgttttta tcgcaaacct gtatggaaag gtaatttaca cagagacagt ataataagtg
     2761 cagattaatc gaaagtgatt atttatttaa gtttcatttc aattaaaaac atcaaagttg
     2821 aaaatatagt tcaataatta aattgatttt tttttgttta gacatagttt ttgtcattaa
     2881 taaattaagt atttattaaa tattaattac ctttggattg attttcaatg ctgtatgtaa
     2941 tcttataatc ataattcaca ataaaaattt aaatatcatg gtaaaacaat taactactaa
     3001 attactgttg tttgcagtgg ttttattgag tagtttaact atgtttgctc aaagtggtgc
     3061 tgttagcggc gttgtaaccg acgccggaga tggaacttca cttccgggag caacaatagt
     3121 tataaaagga actactcaag gagctgttac aaacatcgat ggtaactata ccattaatgt
     3181 tgagcctaat caggtattaa tattctcgta tgttggttac gcaacacaag aattggttgt
     3241 tcaacctaat actactgtaa atgttgct
//
LOCUS       DASCQP010000606         4353 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002173705, whole genome shotgun sequence.
ACCESSION   DASCQP010000606 DASCQP010000000
VERSION     DASCQP010000606.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 4353)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4353)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4353
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002173705"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..561
                     /locus_tag="QF480_10440"
     CDS             <1..561
                     /locus_tag="QF480_10440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005654390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthetase"
                     /protein_id="HJN07022.1"
                     /translation="VTSSNTTVAAVCTGLGIAPKNIGKIFGIFKAYCTRVGSGPFPTE
                     LFDKDGDILRKVGKEFGSTTGRPRRCGWLDIPVLKYAIMLDGVTELMMMKSDVMNQFH
                     EIKVATKYKYNGIVTDEIPFDEAEGSVSPVYTSLPGWSTDSIVSSTYEELPQELKDYI
                     KFIEESVGVPVKLVSFGPDRKETIMR"
     gene            complement(614..2614)
                     /locus_tag="QF480_10445"
     CDS             complement(614..2614)
                     /locus_tag="QF480_10445"
                     /inference="COORDINATES: protein motif:HMM:NF024824.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HJN07023.1"
                     /translation="MFHTKFLFVVILMAFITASSFSQINYHHFIGKGQSELQKQKYLE
                     AIKSFNIAISSKQDGFEAFFLRGIAKFSLGDYRGAVNDFTKTVSFHPLYARAYQYRGI
                     SYDRQLDYAHAVRDFNKALEIDPFNADFFLARGDTKMHLHDFTGAIDDFSSAINLENN
                     VASAWLNRGIARHFLDDDTEALKDIDRAIYLDYFNVEAWVKRGMIKYELDSMESALAD
                     YDHAITLDNSNPYVYFQRALTYLKLADTTNTISNYWKVIDLDPNNALTYYNLAIVYAS
                     GKNYREAVDAYNEVTRINPYNVYTYFNRGNLYYLLKDYSAAETDFTTAIEIFPDFAGA
                     YINRSVVREELNNTKGAKDDQNRAMEIIDAANGGHTDRRVLYSRYADSAYFNRIIEFE
                     ADFVNGNMEKGRVQFKRINIIPKSNFFLVYAFDLPDSIYMKYKQYEYFDENISAFNAD
                     NKLGIRFVFTTREWPVTKEKALTELQRIDSAILIAGDTAGAYFLKGVINSMLQNYYTA
                     INAYDIALSYDSTISYAFLNRGTLRYEMDEFIYSDNRYTNSITISRNSMSNKQKANIE
                     PPDHQAVLIDFDKVISLNSRLPFVYYNRANVKLSIKKFHRAIDDYSMAIKLQPNLAEA
                     YYNRALTLLYLDEIKLACKDLSKAGELGITEAYNVIKRYCNK"
     gene            complement(2620..>4353)
                     /gene="ppk1"
                     /locus_tag="QF480_10450"
     CDS             complement(2620..>4353)
                     /gene="ppk1"
                     /locus_tag="QF480_10450"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: protein motif:HMM:NF003917.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009358 - polyphosphate kinase complex
                     [Evidence IEA];
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006799 - polyphosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 1"
                     /protein_id="HJN07024.1"
                     /translation="IVFLNDAQLKKKQGEFVQKFFRYEVVPNLFPIMLKSLENPDTLS
                     DNAIYLAVHLLDSTEQKDDDYALIMVPTNVISRFLLIPSKSKTNYVMMLDDVMRYCMK
                     EIFAPFGFDTFRSYTIKFIRDAELDIDNDLAKSFIEQINDSVKRRKKGAPVRFVYDRN
                     IPEVFLKRLLRKLNLTITDNLRGGGKYHNFKDFMSFPKIGTPELINPSFSTLSHPVLS
                     KSISILKAIREQDILLHFPYQSFQYIVDLLREASIDPKVRAIKMTFYRAARDSNVINA
                     LINAAQNGKNVTVFLEIQARFDEEANIHWTRKLREEGVKIIKTLPGYKVHSKLLLIRR
                     KEEGQNIYYANISTGNYNESTAKVYADDSLLTANQKITREVNILFHIFESPYNPPKFK
                     HLIVAPYQFRNSFIKLLNTEIRNAKAGKDAWAIIKLNNLVDKKIINKIYQASNAGVKI
                     DIICRGICVLIPHIKGLSENINVISIVDKFLEHSRILVFANGGNSKYYITSADWMIRN
                     FDHRFETACPIYDEDLQNEIMDILKIQLSDNVKARVVNESPINKYVIRDKAKPLRSQI
                     ETYSYLKTISN"
BASE COUNT         1406 a          767 c          672 g         1508 t
ORIGIN      
        1 gttacttctt ctaacactac tgttgcggct gtatgtactg gcttgggtat tgccccaaaa
       61 aatattggca aaatatttgg catatttaaa gcatattgca caagagttgg aagcggtcca
      121 tttcctactg aattgttcga taaagatggt gatatactgc gaaaagttgg aaaagaattt
      181 ggctcaacaa caggtaggcc acgacgatgt ggatggctgg atattcctgt tttaaaatat
      241 gctataatgc ttgacggtgt cactgagtta atgatgatga aatcagatgt tatgaatcag
      301 tttcatgaaa taaaagttgc cacaaaatac aaatataacg gcatagttac agatgaaatt
      361 ccttttgacg aagctgaagg ttcagtttct cctgtataca cttcattacc aggttggtcc
      421 accgattcaa tagttagctc aacatatgag gaattacctc aggaattaaa ggattatata
      481 aaattcattg aggaaagtgt tggtgttcct gttaaacttg tttcatttgg accagacaga
      541 aaagaaacta taatgagata aaactaagta ttgagaatga attttttcac atacttaaat
      601 acatttcaca tatttattta ttacaatatc tctttataac attataggct tcagtaatgc
      661 ccaactcacc tgctttactt aaatctttac aagcaagttt aatttcatca agatataaaa
      721 gagttaaggc tctattataa taagcttctg ccaaattagg ttgtaatttt atagccatag
      781 agtaatcatc aattgctctg tggaattttt taatacttag ttttacattt gccctgttat
      841 agtacacaaa cggtaatctt gaattaagcg aaatcacctt atcaaaatcg attagaacag
      901 cttgatgatc aggaggttca atattggctt tttgcttatt tgacatagaa tttctactaa
      961 tagttattga attagtatat cgattatctg aataaataaa ttcatccatt tcgtaccgta
     1021 aagttcctcg atttaagaat gcatatgaaa tcgttgaatc ataacttaga gcaatatcgt
     1081 atgcattaat tgctgtataa taattttgca acatgctatt tattacgcct ttcaaaaaat
     1141 aagctccagc agtatctcca gcaattaata tggcactatc aattcgctgt aattcagtta
     1201 atgctttttc ttttgttact ggccactcac gtgttgtaaa aacaaaccta attcccaatt
     1261 tattgtcggc attgaatgca gaaatatttt catcaaaata ttcatactgc ttatatttca
     1321 tataaataga atcgggaaga tcaaatgcat ataccaggaa gaaatttgat tttggaataa
     1381 tgtttatgcg tttaaattgc actcttcctt tttccatatt accatttaca aagtctgctt
     1441 caaattcaat tatcctgtta aaatatgctg aatcagcata tctgctataa agaaccctac
     1501 gatctgtatg gcctccattt gcagcatcaa ttatttccat tgctcgattc tggtcatctt
     1561 ttgctccctt agtattattc aattcttctc taactaccga tctatttata tatgcaccgg
     1621 caaaatctgg aaatatttca atggcagttg taaaatcagt ttcggcagca gaatagtctt
     1681 tgagtaaata atacaagttg cctctgttaa aatatgtgta tacattataa ggattaatcc
     1741 tggtgacctc attataagca tcaacagctt ctctataatt ttttccagat gcataaacaa
     1801 ttgccagatt ataatacgtt aaagcattat taggatccag atcgatcact ttccagtagt
     1861 ttgaaatagt attagttgta tcagctaact ttaaatacgt taatgcacgt tgaaaataaa
     1921 cgtacggatt actgttatct aatgtaatgg cgtgatcata atcagcaagg gcagattcca
     1981 tactatcaag ctcatattta atcattcctc tttttaccca agcttcaaca ttaaaataat
     2041 caagataaat tgctctgtct atgtctttga gagcctcagt atcgtcatca agaaaatgcc
     2101 ttgcaatacc acgattaagc catgctgagg caacattatt ctccagatta atagcagaag
     2161 aaaaatcatc aatagcacct gtaaaatcat ggagatgcat ttttgtatca ccacgagcca
     2221 gaaaaaaatc ggcattaaat ggatcaatct ccagagcttt attaaaatct cttacagcat
     2281 gagcataatc caattgcctg tcgtacgaaa tacctctata ttgatatgca cgagcgtaaa
     2341 gcggatgaaa cgatacggtt tttgtaaaat cgttcacagc tcctctgtag tctccaagac
     2401 tgaattttgc aatacctcgc aaaaaaaatg cctcaaatcc atcttgcttt gaagatatcg
     2461 caatattgaa actttttatt gcttcaagat atttttgttt ttgaagttca gactgcccct
     2521 ttccaatgaa atgatgataa ttaatttgag aaaaagacga tgcggtaatg aaagccatga
     2581 gtattacaac aaaaagaaac ttagtgtgga acatggctat taattagaga tcgtttttaa
     2641 ataagaataa gtctctattt gtgatctcag cggcttagct ttgtctctga ttacatattt
     2701 attaattgga ctttcattta caacccttgc cttaacatta tcgcttaact gtattttcag
     2761 tatatccatt atttcatttt gaagatcttc atcgtaaatc gggcatgccg tttcaaacct
     2821 atgatcaaag tttcgtatca tccaatcggc agatgtgata tagtatttcg aattacctcc
     2881 attagcaaat accagaattc gtgagtgttc cagaaactta tcaacgatac taattacatt
     2941 tatattttca ctaagtcctt taatgtgagg tattaacacg cagattcctc tacaaattat
     3001 atcaattttt acacctgcgt ttgatgcctg atatatcttg tttattattt tcttatcaac
     3061 caggttatta agtttaatta ttgcccaagc atccttacca gcttttgcat tccgtatctc
     3121 tgtattaagg agtttaataa agctatttct gaattgataa ggtgctacaa tcaaatgttt
     3181 aaatttgggg gggttgtaag gtgattcaaa tatatgaaac agtatattta cttctctggt
     3241 tattttttgg ttagcagtaa gaagactatc atcagcatat actttagcag ttgattcatt
     3301 ataattaccg gtactaatat tagcataata aatattctga ccttcttctt ttctccttat
     3361 taataacaat ttactgtgaa ccttatatcc tggtaaggtc ttaattattt ttacgccttc
     3421 ctctcgcagc tttctagtcc aatgaatatt ggcttcctcg tcaaaacgtg cctgaatttc
     3481 aagaaaaact gtaacattct taccattttg agcggcattt attaaagcat taatcacgtt
     3541 agaatcacga gcagctcgat aaaatgtcat ttttattgct ctaacttttg ggtctataga
     3601 agcttctctc aataagtcga ctatatattg gaatgattga tatggaaaat gaagtaatat
     3661 atcttgctca cgaatagcct taagtatact aatactttta cttagtacag gatgagataa
     3721 cgttgagaaa ctcggattta ttaattctgg agttcctatt ttagggaacg acatgaaatc
     3781 cttaaaatta tggtatttac ctcctcccct cagattatct gtaattgtta gatttaactt
     3841 tcgaagtaat cttttaagaa aaacttcggg tatattcctg tcataaacaa atcttacagg
     3901 tgctcctttt tttcgtctct taacactatc gtttatctgt tcaataaaac tttttgccag
     3961 atcattatca atatcaagtt cagcatcgcg gataaatttt attgtatatg acctaaaagt
     4021 atcgaatcca aacggtgcga agatttcctt catacaatac cgcataacat cgtcaagcat
     4081 cattacataa ttcgttttac tttttgaagg aatcagcaaa aatctggaaa taacattagt
     4141 tggcaccata atcaatgcat agtcatcgtc tttttgttcc gtggaatcca gtaaatgcac
     4201 agcaagataa atggcattat cacttaatgt atctgggttc tctagacttt taagcattat
     4261 tggaaaaaga ttaggaacca cttcatacct aaaaaacttt tgaacaaact ctccctgttt
     4321 ttttttcagc tgcgcatcgt tgagaaaaac tat
//
LOCUS       DASCQP010000607         2810 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002175369, whole genome shotgun sequence.
ACCESSION   DASCQP010000607 DASCQP010000000
VERSION     DASCQP010000607.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 2810)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2810)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2810
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002175369"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(102..329)
                     /locus_tag="QF480_10455"
     CDS             complement(102..329)
                     /locus_tag="QF480_10455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN07025.1"
                     /translation="MKLNSIIKYNFFVWILMIVMLTNTKCKHDPELIPNPDPDPIECD
                     TMNVTYYGTVFPIIQANCLGVSLHPNLDRLV"
     gene            1035..>2810
                     /locus_tag="QF480_10460"
     CDS             1035..>2810
                     /locus_tag="QF480_10460"
                     /inference="COORDINATES: protein motif:HMM:NF026255.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HJN07026.1"
                     /translation="MFYFKLTFISFLCFIQMLPSLVANNSGEVAEDGKIKGAVVDSQT
                     KEPIEYATIALYREADNELITGTVTDFIGHFKIEKPVAGNYYLIITFIGFKEIKSERF
                     TVINNNRNLNLGNFTLVSSSRNLDAVEVIAKRATIEYRIDKKVINVGKQITAQAGTAI
                     DILENVPSVQVDIEGNVTLRGSSGFTVLIDGRPTILDPSDVLRQIPSTSIENIEIITN
                     PSAKYEPDGATGIINIITLKNRLDGLSGVVNASAGIYGEYAGDLQMSYRMNKLNFVLS
                     ANHRTRSRPGFQTAERKTFSNDTSFFVESSGDTKREYYRSNIRAGIEYDMSKRDFISL
                     SGRIGHWGMMTNSNLRYNDWTFPETAMFSYNSMDHAERGGNYFSVNGLYQRTFSKKVQ
                     KKEVIPNPEINDGKEAKTFENINDPDTKPQIDHALIFKIDYQGRDFNESITNELRDLS
                     DELIDKNKNVEKGPSSKFRLNIDYTLPVSISDKFEAGMQWRSRKSVDITELWLYNDTT
                     GELEYIDKYSHKVDYLRNTYAAYALYGGFAGNFGYQVGLRTEYTYRNIEMVGETPFII
                     DRWDYFPTTHLSYNLPLEQQIMASYS"
BASE COUNT          968 a          409 c          507 g          926 t
ORIGIN      
        1 gacgcttaat ctctcttact tttgatttga cactttgttt tttagttgcc ataacttgaa
       61 tttttattgg ttataaattt atgaattctg tccataaaga tttaaaccaa tctgtccaaa
      121 ttagggtgaa gacttacacc caaacaattt gcttgtatta taggaaacac tgttccgtaa
      181 taggtcacat tcatcgtgtc acattcaatt gggtctggat ctggattagg tattagttcg
      241 ggatcatgtt tacatttagt gttagtaagc ataacaatca taagaatcca tacgaagaag
      301 ttatatttta taatgctgtt tagtttcata tgtattgaat tcgaattgtt atgcttacta
      361 ttatttgtta gtctacaatt ttattaatgc ctgacaatta attttctggt atttgtactt
      421 tttccttgga aagtcaatgc aggatacttt tcaatctcaa tgtaattttc gtaaaagtgt
      481 tgttgttgta gtgcactatt gaaaccctca aggcttcttt acactacttt aaatgcgaag
      541 ttgttattgt taagttttat cgcaccaaat agttcaatag aagtaacaga aataatttct
      601 aatggggcat ccgacttaaa tgttatgact tcttctctcg ataagtaaat attttgcgac
      661 cacaattgaa ggcttaaaaa tgttaataaa agtaaaatgc aaatattctt atttatggtt
      721 agatctctgt tatttcgata gttataattt aaatgattat ctaataaaat tagttattca
      781 atgattcgat catcaaaagt acaataaaat agaggaatgc ctcaagtttc taacttcact
      841 ttgaaattgt atgtctaaca ggattaggga attgaataat acaaattcct ctaactaatc
      901 cttaaaacta ttaattatat agtaatcaat agctacaaga gatggcaatt aaaaaataga
      961 ctttgttgtt cattttttta attattttgc aaaacaattt ctaaatctta ctaaaaaata
     1021 ggaactctaa ttttatgttc tatttcaaac taacttttat aagcttctta tgtttcattc
     1081 aaatgctgcc ttcgctggtt gccaataata gtggcgaagt tgcagaagat ggtaaaataa
     1141 aaggtgctgt tgtggattca cagaccaaag aaccaattga atatgcaact attgccttgt
     1201 atagagaagc agacaatgaa ctgattacag gaactgttac agattttatt gggcacttta
     1261 aaattgagaa acccgttgca ggtaattatt atttgataat tacttttatt ggctttaaag
     1321 aaattaaatc agaacggttc acagttatta ataataatcg taacctcaat cttggtaact
     1381 ttactttagt atcttcttcc aggaatttgg atgccgttga ggtgattgcc aaaagagcta
     1441 ctattgaata tagaattgat aaaaaagtaa tcaatgttgg caaacaaatc acagcacagg
     1501 caggtacagc aatagatatt cttgagaacg tcccatcggt acaagtggat attgaaggta
     1561 acgttacatt aaggggaagt agcgggttta ctgtattgat tgatggcaga ccaacaatac
     1621 tggatccaag tgatgtgctg cgccaaattc catcaacaag tattgaaaat atagaaataa
     1681 taacaaatcc ttcggctaaa tatgagccag atggagccac aggaattatc aatattatta
     1741 ccttaaaaaa ccggcttgat ggtttaagtg gagttgttaa tgccagtgct ggaatatatg
     1801 gtgaatatgc aggggatctt cagatgagct acagaatgaa taaacttaat ttcgttttaa
     1861 gtgcgaatca ccgtacaagg tcgcgacccg gatttcaaac agcggaaaga aaaacgtttt
     1921 caaatgatac aagttttttt gtcgaatctt ccggggatac aaaaagggaa tattatagaa
     1981 gcaatattag agcaggaatt gaatatgaca tgagcaaaag ggattttatt tcattatcag
     2041 gtagaattgg ccattggggt atgatgacta actcaaatct tagatataac gattggactt
     2101 tcccggaaac tgcaatgttt tcttataata gtatggacca tgctgaaaga gggggaaatt
     2161 attttagtgt taatgggtta taccaacgaa cattttcaaa aaaagttcag aaaaaggaag
     2221 taattcctaa tcctgaaatt aacgatggta aagaagccaa aactttcgag aatattaacg
     2281 acccagatac caaacctcaa atcgatcatg ctctaatatt caaaatagat taccagggta
     2341 gagattttaa tgagtcaatt acaaatgaat tgagggacct ctctgatgag ttgattgata
     2401 aaaataaaaa tgttgaaaaa ggaccttcta gtaagtttag gttaaatatt gactatactt
     2461 tacctgtcag cattagcgac aaatttgagg caggaatgca atggagaagc aggaaaagtg
     2521 tcgatattac agaattatgg ctatataatg atacaactgg tgagttagaa tatattgata
     2581 agtacagtca taaagttgat tacttgcgca acacatatgc tgcatatgca ttatatggag
     2641 gatttgcagg taattttggt taccaagttg gccttcgaac agaatatact tatcggaata
     2701 ttgaaatggt tggtgaaact ccttttatta ttgatcgttg ggactatttt cctaccaccc
     2761 atttatcata caatttacca cttgagcagc aaataatggc gagctattca
//
LOCUS       DASCQP010000608         6521 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002175808, whole genome shotgun sequence.
ACCESSION   DASCQP010000608 DASCQP010000000
VERSION     DASCQP010000608.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 6521)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6521)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6521
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002175808"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..408
                     /locus_tag="QF480_10465"
     CDS             <1..408
                     /locus_tag="QF480_10465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016277082.1"
                     /note="Presence of a B(12) (cobalamin)-binding domain
                     implies dependence on cobalamin itself, in one of its
                     several forms, or in some unusual lineages, dependence on
                     a cobalamin-like analog; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-dependent protein"
                     /protein_id="HJN07027.1"
                     /translation="IDGRRPRIMIAKIGQDGHDRGAKVVATGYADIGFDVDIGPLFQT
                     PKEAAKQAVENDVHILGISSLAAGHRTLVPQVITELKKLGREDIMVIVGGVIPPQDYQ
                     FLYDAGVVAIFGPGTVISDAGVSMLNLLIEAKK"
     gene            658..1989
                     /locus_tag="QF480_10470"
     CDS             658..1989
                     /locus_tag="QF480_10470"
                     /inference="COORDINATES: protein motif:HMM:NF014385.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HJN07028.1"
                     /translation="MDKFIILISIIVVTINVRAQEIRHLTIKQAVEYAMENNYQIINA
                     GKDVEAAKYIVKESTSIGLPQVDASVNYNDNIARPVMILPPEFVQPGESDKIQFGTKY
                     DASLGASVSQLLFSGEYIVGLQAARKYLEKTNTDYFKNKVDVKQLVSNSYYAALSATE
                     GLRIVDSTLTITRKLANETREVFNVGFAEDIDVDQLDLLVSDLEASALYLSSKFIISN
                     AYLKFYLGLKDADSIVLTDNMESIISARHNSGLLTNPFNINQNVDFRSLTKQKELSLL
                     QVKLEKASYMPSIAANLNYQTQAQRDEWNFFSNDGGWYSSSVFGVKMLIPVFSSGKRS
                     SKVKQARIAYEQVTVMEQQLTSQLNLQYDAAINEYMNAYRVFENKQVSRKTAEKIYNK
                     TTQKYIEGMSTSLDILNTHNQFLNAENEYINSALLLLKTGEELEKILTKFE"
     gene            1995..2630
                     /locus_tag="QF480_10475"
     CDS             1995..2630
                     /locus_tag="QF480_10475"
                     /inference="COORDINATES: protein motif:HMM:NF012655.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HJN07029.1"
                     /translation="MDEKVKIIIERVANLFCEYGIRSVTMDDIAHTLTISKKTLYNYF
                     KDKEELVWAILKYLNEEKQIDFSIHENNDANAIEELFYHYEIQVEMIKNHKPAFVYDL
                     KKYYPEIYIHFQKIKHNRILDSVKTNLIKGKKEGLYRNDLNEDIISRLTLMRIEGILN
                     SDIFSIEELVSTNLFSEIYKYHLLGIVNDKGRKMLKQKFNKIDESVKISTI"
     gene            2627..3751
                     /locus_tag="QF480_10480"
     CDS             2627..3751
                     /locus_tag="QF480_10480"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HJN07030.1"
                     /translation="MKQLILIFTISIFIISCSSEDENNSDADNLRLYKTQVKELNEKI
                     SDIEQANNDKEYSGIKIPVKLESLSLRPFSHNFTAVGELESINDAFISPEINGQITSV
                     YVSEGQYVQKGQLLAKLNTVIIETNIQEIESQLSLAKTIYEKQSSLWEKNIGSERQYL
                     EAKNSFENLQNKLSTLKAQYDLAIIKSPINGIVEEIFHKKGELATPGMQLMQIVNIDE
                     LYVTVKLSEAYLPIIKKGDIVTISFPAYPGLEYRKPVYRTGNVINKQDRTFIVQIKIA
                     NKNGKLKPHLQANVNINDYNIDNVIVLPTILIKEDMTGSFIYIVETANGKSIATKKYI
                     KTGISYKDKTEILDGLSAGDMIITDGYSNVSNGSVVNVIQ"
     gene            3792..>6521
                     /locus_tag="QF480_10485"
     CDS             3792..>6521
                     /locus_tag="QF480_10485"
                     /inference="COORDINATES: protein motif:HMM:NF013069.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HJN07031.1"
                     /translation="MNKTENSDTDKVIRNFWLSTWALNNKNTVYLITVVTIFFGFYSY
                     VSMPKELFPEINIPTIMVQTLYPGNPPVDIENLITRHLEKEIESVKGINDMNAISSQD
                     ASNIFIEFNTDVDIKVALQDVKDAVDKAKSELPDDLPFDPMIEDIDLSEFPVVNINLS
                     GDYSVNKLKDFAEDMQDEFETISEVSKVNITGITEKEVKIILDPFKMNTLQISFNDVE
                     EAVKFENMSLSGGDMLIGDIKRTIRIIGEFTDPAEIEDIIVKSEKGNIVYLHDIGYVD
                     YGFKDRDSYAYLNSQPVVSLQVVKKSGENLLSTISQVMELLDEAKNTGLIPENLVITV
                     TNDQSDMVKMQLSNLENSIIMGIIFVVFVLFLFLGTRNSLFVGFAIPMSMFLSFMIMG
                     LIDYRINMVVLFSLILALGMLVDNAIVVTENIYRFVDKGYPILEAAKQATGEIAMPII
                     SSTLTTLAAFFPLLFWKSIMGEFMSYMPGTLIIVLSSSLIVALVIIPVIFTVFYKKGA
                     NVSIPKPKRSIILMLILIGLASIFYVFKINWVGTLLLIFTFIGLLNLLFLSRLALWFQ
                     NVGLVWLENSYIRFIKFALHGKTPIFLLFGTIALMILTLTFYFGSDPKVKFFPSADPK
                     LINVLAEMPISTDIEVSDSIMRELEEKIFEVLEPDMDIVESVLTITGKGAIGQDEGFT
                     GRGGAPNKGLITINFVDFKDRGEKSTVKTLERMSEALVGLYPGINLSVEKLKEGPPTG
                     KPINLEVSGGDFDDLLQLTEDIRTEINKVNIPGIEGLKIELEVSKPELLVNIDREKAR
                     RYGLSTAQVGSAIRTALFGKEISDFKDGEDEYKIVIRLDDKFRYNIADIINQRITFRS
                     PSSGKIVQVPISAVADFKYSSTYGAITRKDRSRLITIYSNVLEGYNTNEINTEL"
BASE COUNT         2314 a          985 c         1208 g         2014 t
ORIGIN      
        1 atagatggac gtagacccag aattatgatt gctaaaattg gacaggatgg ccacgaccgg
       61 ggagcaaaag ttgttgctac cggatatgca gatattggtt ttgatgttga tatcggacca
      121 cttttccaaa ctcctaaaga agctgcaaag caagctgttg aaaatgatgt tcatatattg
      181 ggtatttcaa gtctcgccgc aggccatcgc acccttgttc ctcaagttat tacagaactt
      241 aaaaagcttg gaagggaaga tataatggtg atagttggtg gggttatacc tccacaagat
      301 tatcaatttc tttatgatgc tggtgttgtt gcaattttcg gacctggtac tgtaatctca
      361 gatgcaggtg ttagtatgct taatttattg attgaggcga aaaagtaaga gaaattccta
      421 aggaatgagt ccaaccttat tgtttaaatt tacaaattga aaaagacctc tcaacgaaac
      481 tgtttatctc aaataaacat ttattagtgc cctcaaacaa ctcatcattt tatttatttg
      541 aattcttgct gaatttatct taataagaaa caaaataaac ttttaacata atttaagttt
      601 ccaaagttta tttttatgta tttttgccaa attaatacaa aataaatttt gttacaaatg
      661 gataaattca taatcctgat ttctattatt gtggtaacaa ttaatgttag agcacaagaa
      721 atcagacatc taacaataaa acaggctgtt gaatatgcta tggaaaacaa ttaccagata
      781 attaatgctg gcaaggatgt tgaagcagca aagtatattg ttaaggagtc aacctcaatt
      841 ggactgcccc aagttgacgc gtctgttaat tataatgaca atattgcccg tccggtaatg
      901 attttgccgc cagaatttgt acagcccggt gagtcggaca agattcagtt tggaactaag
      961 tatgatgcaa gcttaggagc ttcagtatca caattattat ttagtggaga atatatcgtt
     1021 gggcttcaag cggcaagaaa atatctagag aaaacaaata ctgactactt caagaataaa
     1081 gttgatgtta agcaactggt gtcaaactct tattacgctg cgttgtcagc taccgaagga
     1141 cttcggatag ttgattcaac attaacaatt acaagaaaat tagctaatga gaccagagaa
     1201 gtttttaatg ttggttttgc tgaggatatt gatgttgacc agttagattt attggtttct
     1261 gaccttgagg cttcagctct ttatttaagt agcaagttta ttatttcaaa tgcttaccta
     1321 aagttttatc ttggtttaaa agatgcggac agtattgtac taactgataa tatggaaagt
     1381 ataatatccg caaggcataa ttcgggacta ctgactaacc catttaatat taatcagaat
     1441 gttgatttca ggtctcttac caaacaaaaa gagcttagtt tgcttcaggt aaaattggag
     1501 aaagcatcat acatgccatc tattgcagct aacctaaatt accaaactca ggcacagaga
     1561 gatgagtgga acttctttag taatgatggt ggctggtact caagctcggt ttttggtgta
     1621 aaaatgctaa tacctgtatt ttctagtggc aagagaagtt caaaagtaaa acaggcaaga
     1681 attgcatatg aacaggtgac agtgatggag cagcaactaa ctagccagtt aaatttacaa
     1741 tacgacgctg caataaatga gtacatgaat gcttatagag tatttgaaaa taagcaagtt
     1801 agcagaaaaa cagctgaaaa aatttataac aaaacaactc aaaaatatat tgaaggtatg
     1861 tctacgagct tagatatcct aaacacacat aaccaatttt taaatgcaga gaatgaatat
     1921 attaattcgg cgcttttact tttgaaaacg ggtgaagaac ttgaaaaaat tcttacaaaa
     1981 tttgaataat atttatggac gaaaaagtaa aaataattat tgaaagggtt gcaaatctat
     2041 tttgtgagta tggtatcaga agtgtaacta tggatgatat tgcccacaca cttacgattt
     2101 ctaagaaaac tctttacaac tattttaaag acaaagagga acttgtttgg gcaattctta
     2161 aatatctgaa tgaggaaaaa caaattgatt tctcaataca tgaaaataat gatgcaaatg
     2221 ccatagagga attattttac cattatgaaa ttcaggtgga aatgattaaa aatcacaagc
     2281 ctgcatttgt atacgattta aaaaaatatt accctgaaat ttatatccat tttcaaaaga
     2341 taaagcataa ccgaattctt gacagtgtaa aaacaaatct aattaagggt aagaaagaag
     2401 gactttacag gaacgactta aatgaagata taatctccag actaactttg atgcgcatag
     2461 aaggtatttt aaattctgac attttcagta tagaagagtt ggtttcaacg aatttatttt
     2521 ctgagatata taaatatcat cttttgggta ttgtaaatga taaaggcaga aaaatgctta
     2581 agcaaaagtt taacaaaatt gacgaatcag taaaaatcag cacaatatga aacaactaat
     2641 attaatattt acaatcagta ttttcattat ttcatgctct tcggaggatg aaaataattc
     2701 tgatgcagat aacctaagat tgtacaagac gcaggttaaa gagttaaatg agaaaatatc
     2761 agatattgag caggccaata atgacaagga atattcgggg atcaaaatac ctgttaaatt
     2821 ggaatcattg tcgctgcgac cattttcaca taatttcacc gccgtaggtg aactcgaaag
     2881 catcaatgat gcatttatta gcccggaaat taatggtcag attacttctg tatatgtatc
     2941 ggaaggacaa tatgttcaga aaggacagtt gcttgctaaa ctaaatacag taattattga
     3001 aacaaatatc caggaaattg aatcacagtt aagtctcgca aagacaattt atgagaagca
     3061 atcatcttta tgggaaaaaa atataggctc agaaaggcaa taccttgaag caaagaattc
     3121 tttcgagaac cttcaaaata aacttagtac tttaaaagct caatatgatt tggctataat
     3181 taaatcacca ataaatggca ttgtagaaga aatctttcat aaaaaaggag agctggcaac
     3241 tccaggcatg caattaatgc aaattgttaa tattgatgag ctttatgtta ctgttaaatt
     3301 gtcggaagca tatcttccaa taattaagaa aggtgatatt gttaccattt cattcccagc
     3361 ttatcccgga ctcgaatatc gcaaacctgt ctatcgaaca ggtaatgtga tcaacaaaca
     3421 agacaggaca tttattgtac agataaaaat agctaacaaa aatggaaagc ttaagccaca
     3481 tcttcaggcc aacgtaaata taaatgatta caatattgat aatgtgattg tacttcctac
     3541 aattctgatt aaggaagata tgacaggatc atttatatac atagttgaga cagccaatgg
     3601 aaaaagtata gctacaaaaa agtatattaa aacaggaatc tcatataagg ataaaaccga
     3661 aatacttgac ggattaagtg ctggcgatat gataattacc gatggttata gcaatgtgtc
     3721 aaatggatca gtagtcaatg ttatacaata acaaaattaa atgtatcatt caaattaata
     3781 tactttaacg gatgaataaa actgaaaata gcgatacaga caaagttata cggaatttct
     3841 ggttatcaac atgggctctt aataataaaa atactgttta ccttataaca gtagtaacaa
     3901 tattctttgg attctattct tatgtttcaa tgcccaaaga actttttccg gaaataaata
     3961 tacctacgat aatggtccaa accctgtatc ctgggaaccc tcctgttgat atagaaaatt
     4021 taattaccag acatcttgag aaagaaattg aatctgtcaa gggtataaat gatatgaatg
     4081 caatatccag tcaggatgcg tcaaatattt ttatcgagtt taatacagat gtggatatta
     4141 aggttgccct gcaggatgta aaagatgcag ttgataaagc aaaaagcgaa ctccctgatg
     4201 acctgccttt tgatccaatg attgaagaca tcgacttgtc ggagttccct gttgtaaaca
     4261 taaacctgtc tggtgattat agtgtgaata agctcaagga ttttgctgaa gatatgcaag
     4321 atgaatttga gacaatttca gaggtatcta aagtaaacat tacaggtatt accgaaaagg
     4381 aggttaagat tattcttgat ccatttaaga tgaatacttt acagataagc tttaatgatg
     4441 ttgaagaagc tgtaaaattt gaaaacatgt ccttatcagg tggtgatatg ctaattggag
     4501 atattaaacg tactataagg ataattggtg aatttaccga tcctgctgaa attgaagaca
     4561 taattgtaaa aagtgaaaaa ggaaacattg tttatttgca cgacataggt tatgtagatt
     4621 atggttttaa agatcgcgac agttatgctt atctaaacag ccaaccagta gtctctcttc
     4681 aggttgtcaa aaaaagtgga gaaaatttac tctctactat ttcccaggta atggaacttc
     4741 ttgacgaagc aaaaaacacc ggtttaattc ctgaaaattt agtgattact gtaactaacg
     4801 atcagtcgga tatggtaaaa atgcagctga gcaacctcga aaacagcatt atcatgggaa
     4861 taatctttgt tgtttttgtt ttattcctgt ttttgggaac cagaaattca ctatttgttg
     4921 gtttcgctat tccgatgtcg atgtttcttt catttatgat aatggggctg atagattaca
     4981 gaataaatat ggttgtactc ttttcattga tacttgcact agggatgctt gtagataatg
     5041 caattgttgt aacggaaaat atatacaggt ttgttgataa aggatatcca atattagaag
     5101 ctgctaaaca agctaccggc gaaattgcta tgcctattat ttcttcaaca cttactactc
     5161 ttgcagcatt ctttccatta cttttctgga aaagtattat gggcgaattt atgtcgtata
     5221 tgccgggaac attgataatt gttctttcct cctcccttat tgtggccctt gtcataatac
     5281 ctgtaatctt taccgttttc tataaaaaag gggcaaatgt ttctatcccc aagccgaaaa
     5341 gaagtataat actaatgcta atattaatcg gccttgcttc gatattttat gttttcaaaa
     5401 ttaactgggt aggaacattg ttattaatat tcacttttat cggattatta aatcttcttt
     5461 tcctctcacg gcttgcttta tggtttcaaa atgttggatt ggtttggctc gaaaactcat
     5521 atattagatt catcaaattt gccttacatg gaaaaacacc catctttctt ttatttggga
     5581 caattgcttt aatgatatta actctcacat tctattttgg aagtgatcca aaagttaaat
     5641 tttttccttc tgccgaccca aaacttataa atgtattggc cgagatgcct attagtactg
     5701 atatagaagt aagtgattcg ataatgcgag agctggaaga aaaaatattt gaggtattag
     5761 aacctgatat ggatattgtt gagtcagtat taacaataac tggaaaaggg gctattggac
     5821 aggatgaagg ttttaccgga cgtggcggag cacctaataa gggattgatt acaattaact
     5881 ttgtcgactt taaggaccga ggagaaaaga gtacagttaa aacacttgaa cgaatgtccg
     5941 aggcattggt tggtttatat cctggtataa atctttcagt agaaaaacta aaagaagggc
     6001 ctccaactgg caaaccaata aatcttgaag ttagcggtgg cgattttgat gatttattac
     6061 aacttaccga agatataaga actgaaatta ataaagttaa tattcccggt atagaaggtt
     6121 taaaaatcga acttgaagtg agtaaacctg aattacttgt taacatcgac cgtgagaagg
     6181 caagacgata tgggttgtca actgcacagg tgggaagcgc tatacggaca gctttattcg
     6241 gtaaagaaat ctctgatttc aaagatggcg aagatgagta taagatagtt ataaggcttg
     6301 atgataagtt tagatacaat atcgcggata ttattaacca acgaataact tttaggagtc
     6361 catcatcagg taaaattgta caagtaccaa tatctgcagt tgctgatttc aaatatagct
     6421 caacttatgg ggccataaca aggaaggatc ggagcagatt aataactatc tattcaaatg
     6481 tacttgaagg ctacaatact aatgaaatta atactgaact c
//
LOCUS       DASCQP010000609         1935 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002180560, whole genome shotgun sequence.
ACCESSION   DASCQP010000609 DASCQP010000000
VERSION     DASCQP010000609.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1935)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1935)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1935
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002180560"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            54..515
                     /locus_tag="QF480_10490"
     CDS             54..515
                     /locus_tag="QF480_10490"
                     /inference="COORDINATES: protein motif:HMM:NF024212.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HJN07032.1"
                     /translation="MIVEDTVDFHLRSTLFAMRRMYNLIALENGITQGIGYALINIGE
                     EGIPATKIAPLMGMTSSSLSRMLKTMQDEGMIYRQPDKDDKRIVRIFLTVEGEILRDR
                     VEQVVLNFNNELFKKLDIEALRAFERVNNIIKEQVKQEIAIRQNNGNRKVK"
     gene            527..>1935
                     /locus_tag="QF480_10495"
     CDS             527..>1935
                     /locus_tag="QF480_10495"
                     /inference="COORDINATES: protein motif:HMM:NF014757.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase family protein"
                     /protein_id="HJN07033.1"
                     /translation="MIRRIKKVAVLGSGVMGSGIACHFANIGTEVLLIDIVPGELNGK
                     EKTAGMSLDDKAVRNRIVNDSLNAMLKSKPSPIYKQEFAKRITTGNFDDDLQKICDYD
                     WVIEVVIERLDIKKSIFERVDKLRKSGSLITTNTSGISVEEMIVGRSEDFQKNFCGTH
                     FFNPPRYLQLFEIIPTSETNPEVISFLEEYSAKFLGKTPVIAKDTPAFIANRIGTFSI
                     MHLFNNVQNYDLTIPEIDKLTGPVIGRAKSATFRTADIVGLDTLVHVSNNLKETTNDE
                     ANKIFNIPDYLVKMLDKKWLGSKTKQGFFKKVVEDGKKKFLSVDFKTLDYIEAPRPRF
                     GVFEKTKDIDNPAERIPILCADKGKVGDFYRASFYALFEFSSNRIPEISDDIYKVDDA
                     LNAGFGWKLGPFQTWDVLGVKDTVKAMEDAGLKAAKWVYDMLAAGITSFYKVENGLKY
                     YYDISSKAYKVIPGQEGRLS"
BASE COUNT          684 a          285 c          398 g          568 t
ORIGIN      
        1 acatgcatag cattattgtt gtaaatttgc aatgcacgca taatagttag tatatgattg
       61 tagaagacac ggtagatttt caccttcgct caacactttt cgctatgcga aggatgtata
      121 acctaatagc acttgaaaat ggtattactc aaggcattgg atacgcactt atcaatattg
      181 gagaggaggg aatacctgcc acaaaaattg ctccgttgat gggtatgaca agctctagtt
      241 taagccgaat gttgaaaacg atgcaggatg aaggaatgat ataccgtcaa cctgataagg
      301 atgacaaacg aattgttcga atattcctca ctgttgaagg agaaatatta agagacagag
      361 tagaacaagt agtgctaaat tttaataatg aactctttaa gaagttggat attgaagctt
      421 tacgtgcatt cgaaagagtc aataatatta ttaaggaaca ggtaaaacaa gaaatagcta
      481 tacgacaaaa taatggtaac cgtaaagtga aataaaatat ttaaacatga tacgtagaat
      541 aaaaaaagta gcagtcttgg gttcgggcgt aatgggatca ggaattgcat gccattttgc
      601 aaatattgga acagaagttt tgctcattga tattgttcca ggagagttaa atggaaagga
      661 aaaaacagcg ggaatgagcc tcgatgacaa agcagtaagg aatcgtattg taaatgattc
      721 gctcaatgcc atgctaaaat caaaaccatc tccaatttac aaacaggaat ttgcaaagcg
      781 tattactaca ggaaattttg atgatgatct tcaaaaaata tgcgattatg actgggttat
      841 agaagtggta atagaaagat tggatattaa gaaatcgatt tttgagagag tggataaact
      901 gcgtaagtcg ggttcattaa taaccaccaa tacttctgga atatctgttg aagaaatgat
      961 tgtaggacga agtgaggatt ttcaaaagaa tttctgtggt acacacttct ttaatccacc
     1021 tcgctatcta cagttatttg aaattatccc taccagcgaa accaatcctg aagtaatttc
     1081 atttttagaa gaatattcag caaaatttct tgggaaaacc cctgtgattg cgaaagatac
     1141 accagcattt attgcaaata gaataggtac cttttcaata atgcatttgt ttaataatgt
     1201 gcaaaattac gaccttacaa ttcctgaaat agataaactt acgggccctg tcataggacg
     1261 cgcaaagtct gctactttta gaactgctga tattgtaggt ttagatactt tggtacatgt
     1321 ttccaataat ctaaaagaaa ctacaaatga tgaggccaac aagatattca acattccaga
     1381 ctaccttgtt aagatgcttg ataagaagtg gttaggttca aagaccaagc agggcttctt
     1441 taaaaaagtt gttgaagatg ggaaaaagaa attcctttca gttgatttca aaacgcttga
     1501 ttacattgaa gctccaagac cgagatttgg cgtttttgaa aaaacaaaag atattgataa
     1561 tcctgctgaa cgcataccga ttttatgtgc tgataaaggg aaagtgggtg atttttatag
     1621 agcatcgttt tatgcgttat ttgaattcag ttcaaatcgt attcctgaaa taagtgatga
     1681 tatctacaaa gttgatgatg ccttaaatgc aggttttggt tggaaattag gccctttcca
     1741 aacctgggat gtattaggtg ttaaagatac tgttaaagca atggaagatg ctgggttaaa
     1801 agcagctaag tgggtatatg atatgcttgc tgcaggaata acttcatttt acaaagttga
     1861 aaatggcttg aaatattact atgatatttc atcaaaagca tacaaggtga ttcctggtca
     1921 ggaaggaaga ctatc
//
LOCUS       DASCQP010000610         6201 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002188156, whole genome shotgun sequence.
ACCESSION   DASCQP010000610 DASCQP010000000
VERSION     DASCQP010000610.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 6201)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6201)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6201
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002188156"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            332..2158
                     /locus_tag="QF480_10500"
     CDS             332..2158
                     /locus_tag="QF480_10500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN07034.1"
                     /translation="MSKTHSFHIPVMGLGFSVDTPLKVSQFGINSVISIVDDMLLEKL
                     RKVYCNKFEIPYDEISEKIEDFRAKRVTSYLNLINGLAEKKFEELKNATIEKSNEVKE
                     YFNMLPDSSTIKQEFNSLTEKYFNFNEIKNWIKDNLSMGSVDVNIMTKVDKANYTKEG
                     QLPIEYNDAHASLRGYAKSDLKSSIILSAGMNTRLYSYIEQFEDFFPDESGEIKKKIV
                     LKVSDYRSALIQGKFLAKKGLWVSEYRIESGLNCGGHAFATDGNLMGPILEEFKKNRK
                     ELISSIHAVLVKALSDRDRTVPDAELPIIITAQGGVGTAEEHQFLIDHYEVDSVGWGS
                     PFLLVPEVTNLDDHTREQLSEAKEDDLYLSNISPLGVPFNSLRGNSMDVEKLSLIDKG
                     RPGSSCPKKYLLNNTEFTEKPICTASYKYQRLKIKELDNELLFPKEYKTKFDKIVDKS
                     CLCLGLAESALLVNNEGTKAYGDGVSVCPGPNMAYFSKITSLQGMIDHIYGRANIITR
                     NDRPNMFVKELKIYIDFLKNKIEETKASMTNKQEKNLLAFVQKLKEGINYYSGLFNEL
                     KDRFEDTKSIIQSDLEVCMRTLHILKLEIENLSLETAVVQPD"
     regulatory      2483..2620
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01055"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="molybdenum cofactor riboswitch; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="molybdenum cofactor"
                     /db_xref="RFAM:RF01055"
     gene            2676..3407
                     /locus_tag="QF480_10505"
     CDS             2676..3407
                     /locus_tag="QF480_10505"
                     /inference="COORDINATES: protein motif:HMM:NF014035.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HJN07035.1"
                     /translation="MEINILFLIALFIVAFMYASVGHGGASGYLALMALFGVSTIFMR
                     SSALILNLFVSVVSFYAFYKGGYFKIKLLVPFIIGSLPMAFLGARMNIDPQLFKFILG
                     IFLVIAVTRMIYVPKSDRKEIIPFNFVIAFFIGAFLGFFSGLIGIGGGIILSPLLLLL
                     GWANMKETAAISASFIFLNSASGIAGLISSGIHVSPHLLYWVIVAFMGGILGAYMGSF
                     KLSLVKLKYLLAFVLFLASIKLFLV"
     gene            3429..3986
                     /locus_tag="QF480_10510"
     CDS             3429..3986
                     /locus_tag="QF480_10510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN07036.1"
                     /translation="MLSEFRNILLVSGSGRNCGKTTVACNIINQLKRNRIVYGLKITP
                     HFHKTGDLQQIVEEGNGYKIYRETDYCSGKDSSRMLVAGAKEVYFIQFSDENLLRIYA
                     RIKQLIPEGYPIVCESGSFATAYKPGLHILVVGADIDDSKKSYYSNLRKAEIITTSDE
                     FTQSNLSPLISYAGTSWTINKNDHD"
     gene            3979..5154
                     /locus_tag="QF480_10515"
     CDS             3979..5154
                     /locus_tag="QF480_10515"
                     /inference="COORDINATES: protein motif:HMM:NF013183.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030151 - molybdenum ion binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HJN07037.1"
                     /translation="MISLEEAITLIDNTCAKPMESERVRIEIALNRVLAEDVFTDMDF
                     PSFNKSAMDGYAMQREDMSNTIRIIEFIPAGKRPEKSVVSGTCSKIMTGAMIPEGADM
                     VVMKEDVTVSGEFITVVNPKSKDNILKQGEFLKTGNLLVQKGVNINPSHIGMLASVGA
                     IEPLVYSLPIVSIISTGSELVSPEEKPLPPKIRDSNSSQLESMVHNSKAIALSIGHVA
                     DNIDMIFDAVQKALELSNIVVLTGGASVGDHDFTEKVFNKLDAKTHFTTLAIQPGKPV
                     LFATVGKKYLFGLSGNPVSSFVQFHLLIKPLLNRLVGKMPKSKILKLAISIDKRRNRA
                     DRMLFFPVKISDNMEAEPLDYQGSAHLNAYQQADGMACFPIGFVELKKGTIIDVRPI"
     gene            5138..5938
                     /locus_tag="QF480_10520"
     CDS             5138..5938
                     /locus_tag="QF480_10520"
                     /inference="COORDINATES: protein motif:HMM:NF015983.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HJN07038.1"
                     /translation="MLDQFNRKISYLRISVTDRCDLRCIYCMPSEGITWLDHSKMLSF
                     EEIIDVVEVAVELGIEKIRLTGGEPLVRKGIANLVKIIAETKGVKDLAMTTNGQQLEK
                     YAEELYKAGLNRVNVSLDTLNSEKYSMLTRGGDIGKVFAGLEAAYHTGLSPIKINCVL
                     NEQTTEEDKLELSSFCKEKDYKLRFIHQMSLTTGSFYPVEGGDGGQCSICNRIRLTAQ
                     GDVKPCLFSSYGYNVREWEAKNAIHRAIGRKPEKGQKNLVNEFYNIGG"
     gene            5940..>6201
                     /locus_tag="QF480_10525"
     CDS             5940..>6201
                     /locus_tag="QF480_10525"
                     /inference="COORDINATES: protein motif:HMM:NF014070.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HJN07039.1"
                     /translation="MKKNLSHINETGKAEMVDVGSKPDQYRQATASGIIRLSPETIQL
                     IVRNQIKKGDVLTVAEIAGIQAAKQTPNLIPLCHTLLLNKVKI"
BASE COUNT         2137 a          890 c         1220 g         1954 t
ORIGIN      
        1 attacttatg gcccagttta agccgaaacc aaaaacgcct aataacaaga atatagcaat
       61 tagtctggat tttttcatat aaaaaatttt attagttttt gataaacatc tctgaaatgt
      121 ggtgcaatat agaaacaata attgaaatat ttgaagccat attctcttat ctaaaaagtt
      181 aaaatatttt ggaagattgt tattaagagt atttttgtaa ttttgcagga acataattat
      241 cgataataat tgtggaaaaa ggatgacttc tatattgatt tgcatataaa aatcgttatt
      301 agtaaggaag tttggttaaa ttaattcaac tatgagcaaa acacattcat ttcatattcc
      361 tgttatgggc cttggatttt ctgttgatac cccattaaaa gttagtcaat ttggaataaa
      421 ttctgttatt tctatagttg atgatatgct tcttgaaaag ttaagaaagg tatattgtaa
      481 taaatttgaa atcccttacg atgaaatttc tgaaaagatt gaagacttta gagcaaaaag
      541 agttacatct tatctaaact tgataaatgg cttagccgaa aagaaatttg aagaattaaa
      601 gaatgctaca attgagaaaa gcaatgaagt aaaagaatac ttcaacatgt tgcctgatag
      661 ttcaactatt aaacaggaat tcaatagttt aactgagaaa tattttaatt ttaacgagat
      721 taaaaactgg ataaaggata atctatcaat gggtagtgtt gatgtaaata tcatgaccaa
      781 agttgataaa gctaattaca caaaagaagg gcaattacca attgaatata atgatgcaca
      841 tgcttcacta aggggctatg caaaaagcga tttgaaatct tcaattattc tttcagcagg
      901 aatgaatacc agattataca gttatattga gcaatttgaa gatttctttc cagatgaatc
      961 aggagaaata aaaaagaaaa tcgtattaaa agttagcgac tataggtcgg ctttgataca
     1021 gggcaaattc ttagcaaaaa aaggattatg ggtaagtgaa tacaggattg aatcaggact
     1081 taattgtgga gggcatgctt ttgcaactga cggaaatcta atgggtccaa tattggaaga
     1141 gtttaaaaaa aatcggaaag aattgatttc ttcaattcat gccgtcctgg taaaagctct
     1201 ttctgataga gatcgtactg tacctgacgc agagctgccc ataataatta ctgctcaagg
     1261 aggtgttggc actgctgaag aacatcaatt tctaatcgac cattatgaag ttgattcagt
     1321 gggatgggga tcaccttttc ttctagtgcc tgaagtaaca aaccttgacg accacacaag
     1381 agagcaactg agtgaagcga aagaggatga tctgtatttg agtaatattt caccattagg
     1441 tgttcctttt aatagcctta gaggaaattc aatggatgtt gaaaagttat cattgatcga
     1501 caaaggtcga ccaggtagtt catgtcctaa aaagtatctt ctcaataata ctgagtttac
     1561 tgagaaacca atttgtactg cctcctataa ataccaacgt ctgaaaataa aagagttaga
     1621 caatgaatta ttatttccta aggagtataa aaccaaattt gataaaatcg ttgacaaatc
     1681 atgcctttgc cttgggttag ccgaatctgc acttttggtg aataatgaag ggactaaagc
     1741 ttatggcgat ggtgtttcag tttgtcctgg accgaacatg gcatatttct caaaaataac
     1801 gagtctgcaa ggaatgattg atcatattta tggaagagcg aatataataa ccagaaacga
     1861 tcggcctaat atgtttgtta aagagttgaa aatttatatc gattttctca aaaataaaat
     1921 tgaagaaaca aaagcttcaa tgacaaataa gcaagaaaag aatttgttag cttttgtaca
     1981 aaaattaaaa gaagggataa actactattc tggtttattt aatgagttga aagatagatt
     2041 tgaagataca aaatctataa ttcaaagtga tctggaagtt tgtatgagaa ctctacatat
     2101 tcttaagtta gaaatagaaa atctttccct agaaacagct gtagtacaac ctgattaaag
     2161 gtcaacatta tttatacttt tcccctagac gtgttaacaa ttctaaccga tttttcaata
     2221 aattggatat gttgtttaat tcaatcacta tctctattat tcgtagaccg ttacttaata
     2281 aattccagaa catacaattc acttttaata tgtttttaat agtttttctg cgaaaagtga
     2341 aaacagaaag ccataaataa taaagcaaag gtcttgtttc ctaatttgta ggtgctagag
     2401 aattttaaat ttgttcattt accccgttta atttgaaaat tatattacat ttgtactggg
     2461 tattgtaata ctcgaaaaca ttataaatgt aaagctccga gtacatttcc taaatgctcc
     2521 tgcatatgga atttgtgccg acgggatggc agggaaaccg gtcatcctcc cgatttccgc
     2581 aatgcggaat gacttggaaa ggaggaatgt tgacagtcca tgaattggat gcttagcctt
     2641 gtttccataa gagtgtgatt atttatttat aaactatgga aatcaacatt ctgtttttaa
     2701 ttgctttatt catagtagca tttatgtatg cgtcggtagg gcatggaggt gctagcggct
     2761 atcttgcact aatggcattg tttggagtat caacaatatt catgcgatct tccgcactta
     2821 ttctaaacct ttttgtttca gtagtttcat tttacgcatt ttacaaggga ggatatttta
     2881 aaattaaatt attagtccct tttataattg gatcattacc aatggctttt ctgggtgcta
     2941 gaatgaatat cgaccctcaa ttattcaaat ttatccttgg aatttttctt gttattgctg
     3001 ttaccagaat gatttatgtg ccgaaaagtg atcgtaagga aattatacca ttcaactttg
     3061 taattgcatt ctttattgga gcatttcttg gattcttctc tgggttaatt ggtataggtg
     3121 gtggtattat tttaagtcca ttgctattat tgttgggttg ggccaatatg aaagagacag
     3181 ctgcaatttc agccagtttt atctttttga attctgcatc tggtattgca ggattaattt
     3241 catctggcat ccatgttagt cctcatttat tatattgggt tattgtagca ttcatgggag
     3301 ggatattagg tgcttatatg gggagtttca aattgtcgct agtcaagttg aagtatttac
     3361 ttgcttttgt tttgtttttg gccagtatta aattgttttt agtttgatta taagtataat
     3421 aacaagtaat gttgagtgaa tttagaaata tattattggt atccgggtcg ggtcgtaatt
     3481 gtggaaaaac aacagttgct tgtaatatta tcaatcaatt gaaaagaaat agaattgtat
     3541 atggattaaa aataactcct cattttcata aaactggaga tttgcaacaa atagttgaag
     3601 agggaaatgg atacaaaata tatagggaga cagattattg ttctggaaaa gatagttctc
     3661 gtatgttagt tgcaggtgca aaagaagttt actttattca gttttctgat gaaaatttgt
     3721 tgagaattta tgctcggata aagcaactaa tacctgaagg ctatccaata gtttgtgagt
     3781 cagggtcttt tgcaactgca tataaacccg gattacacat tctggttgtt ggtgctgata
     3841 tcgatgattc aaagaaatca tactactcta atttaaggaa agcggaaatt attactacat
     3901 cggacgagtt cacgcagtct aatcttagtc ctcttataag ttacgctggc accagctgga
     3961 caataaataa aaatgatcat gattagttta gaagaagcaa ttaccttaat agacaacact
     4021 tgtgctaaac ctatggaatc agaaagggtt aggattgaaa ttgctttgaa cagggtatta
     4081 gctgaggatg tttttacaga tatggatttt ccctctttta ataaatcagc catggatgga
     4141 tatgcaatgc aacgagaaga tatgtccaac acaatacgta tcattgaatt tattcctgcc
     4201 ggaaaaaggc ctgagaagag cgttgtttca ggaacatgtt ccaaaataat gaccggagca
     4261 atgatacctg agggagcaga catggttgtt atgaaagaag atgtaactgt atcaggtgaa
     4321 tttattacag tggttaatcc aaagtcaaaa gacaatatac tcaagcaagg ggaattccta
     4381 aaaactggca atttgttagt acaaaaaggg gttaatatca atccgtcaca tattgggatg
     4441 cttgcttcag tcggggctat tgaaccattg gtttatagtt tgccaattgt gtcaattatt
     4501 tcaacaggaa gcgagcttgt ctcacctgag gaaaaacctt taccgccaaa gataagagat
     4561 agtaattcca gccaacttga aagcatggtg cataattcaa aagctatagc attgagtatc
     4621 gggcatgtag ccgataatat tgacatgatt tttgatgctg ttcaaaaggc tttagagtta
     4681 tcaaatattg ttgttttaac tggaggcgcc tctgttggtg atcatgattt tactgaaaag
     4741 gtatttaaca aattagatgc taaaactcat tttacaactc tggcaatcca acccggtaaa
     4801 cctgttcttt ttgcaactgt tggtaagaaa tacttatttg gattatcagg aaatcctgtt
     4861 tcttcatttg tacaatttca tttgcttata aaaccgttgc taaacagatt ggttggtaag
     4921 atgccaaaat caaagatatt gaaattggca ataagcattg ataaaagaag aaatagagcc
     4981 gataggatgt tattttttcc agtgaagatc agtgataata tggaagctga accacttgat
     5041 tatcaaggct cggctcattt aaatgcatac caacaggccg acggaatggc atgttttccg
     5101 attggatttg tagaattaaa aaagggaact ataatcgatg ttagaccaat ttaatagaaa
     5161 gataagttat ctaagaatat cagtaacaga tcgttgtgat ttgcgttgca tatactgtat
     5221 gccatctgaa ggtataacat ggcttgatca cagtaagatg cttagtttcg aggaaattat
     5281 tgatgttgtg gaagtagccg ttgaactagg tattgaaaag atcagattaa ctggtggtga
     5341 acctcttgtg cgtaagggaa tagcaaatct cgtaaagatt atagctgaaa ccaaaggagt
     5401 taaggatctt gcaatgacaa caaatggaca acagctcgaa aaatatgcag aagaactgta
     5461 taaagccgga cttaatagag tgaatgttag cctcgacact ttgaattctg aaaaatatag
     5521 tatgctaact cgaggaggag atattggcaa agtattcgcg ggacttgaag cagcgtatca
     5581 tacaggcttg agcccaataa agattaactg tgtgttgaat gaacaaacca cagaagaaga
     5641 taaacttgaa cttagttcat tctgtaaaga gaaagattac aaactaagat ttattcatca
     5701 gatgtcgtta accaccggaa gtttttaccc ggttgaagga ggtgatggag gacaatgctc
     5761 tatttgtaac cgtataagat taactgcaca aggtgatgtt aaaccttgtt tatttagcag
     5821 ttatggctat aatgtaagag aatgggaagc taaaaatgct atacataggg cgattggcag
     5881 gaaacctgaa aaaggacaaa aaaatttggt aaatgaattt tataatatag gaggataaaa
     5941 tgaaaaagaa cctaagtcac ataaatgaaa ccggtaaggc agaaatggta gatgtgggat
     6001 ctaaacctga ccaatacagg caagccacag caagtggcat catacggttg tcaccagaaa
     6061 caattcaact catagtaagg aatcaaataa agaagggtga tgttctaacg gtagcagaaa
     6121 tagcaggaat ccaagcagca aaacaaacgc cgaatcttat tcccctttgt catacattat
     6181 tgttgaataa agtaaaaatc g
//
LOCUS       DASCQP010000611         1695 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000002192528, whole genome shotgun sequence.
ACCESSION   DASCQP010000611 DASCQP010000000
VERSION     DASCQP010000611.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1695)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1695)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1695
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002192528"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(131..658)
                     /locus_tag="QF480_10530"
     CDS             complement(131..658)
                     /locus_tag="QF480_10530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN07040.1"
                     /translation="MKRTLIIVTVTLLSLSASAQFRDMLNFNSGGMLSVQWDIAKPMG
                     SMKDYVKNTSFSGISIDYKHCYKKDIIIGGRIGWNYLYENKGLTNVEDGTSTTYTPID
                     HNVNVIPILLVVDYMPNSNKFIPYAGIGIGTYFINSSVISNNVKTASSNTFHFGISPE
                     VGLTIPFIISNFGLI"
     gene            complement(670..954)
                     /locus_tag="QF480_10535"
     CDS             complement(670..954)
                     /locus_tag="QF480_10535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJN07041.1"
                     /translation="MKPNPKKGEANKGNQEGRNVDYDEAVARHFEMQSESTKQMMLKS
                     DKMRKSKNAGISRVWYDKLFNNSCFKNSAMVKTGHTNMSITKRESCFLKY"
     gene            complement(1200..1685)
                     /locus_tag="QF480_10540"
     CDS             complement(1200..1685)
                     /locus_tag="QF480_10540"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009018008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004725 - protein tyrosine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight
                     protein-tyrosine-phosphatase"
                     /protein_id="HJN07042.1"
                     /translation="MKTKILFVCLGNICRSPSAEAVFKGLVRKKGVQDKFEIDSSGTY
                     AYHEGECADMRMQSHAVKRGYNLTSISRPFDSNRDWDRFDYIIAMDDSNLRNLRAMGR
                     NKDDLKKLFKMTDFANNFSYNEIPDPYYGGEQGFELVLDLLEDAGEGFYEFLENSRSH
                     N"
BASE COUNT          533 a          314 c          236 g          612 t
ORIGIN      
        1 atagctatta ttttatttgt gctcatcgct taattgattg attaatacat aaatgaaatt
       61 cctatgcaaa agtcaaacca tgaataacct gacgaactac ctgcgcccag agcataatta
      121 tattttgtgc tcagattaaa ccgaaattac ttataataaa tggtatagta agtcctactt
      181 ctggggaaat accaaaatga aaagtattgc tactcgcagt cttaacatta ttagatataa
      241 cagatgagtt aataaagtaa gtacctatgc cgattcctgc ataagggatg aatttattgc
      301 tattaggcat gtaatccact accagcaaaa tagggataac gttaacatta tgatcaatag
      361 gcgtgtacgt agtacttgtt ccgtcttcaa catttgttaa acccttattc tcgtataaat
      421 aattccaccc tatcctgcca ccaattataa tatctttttt ataacagtgt ttgtagtcaa
      481 tactaatccc tgaaaaagat gtattcttta cataatcttt cattgagccc ataggtttag
      541 caatatccca ttgtacacta agcataccac cactgttaaa atttagcata tctctaaatt
      601 gtgcagatgc ggataaggat aacagtgtta cagtaacaat tattaatgtt cgtttcatgg
      661 attacttagt taatatttta agaaacagga ttcccttttt gtgattgaca tatttgtatg
      721 cccagtttta accatagctg aatttttaaa acaactgtta ttgaatagtt tatcatacca
      781 cactcgactt attcctgcat ttttactttt ccgcatttta tccgacttaa gcatcatttg
      841 ttttgtgctt tcgctttgca tttcaaaatg acgtgccaca gcttcatcat aatcaacatt
      901 tctaccttcc tgatttcctt tattagcttc tcccttttta gggttaggtt tcataataat
      961 ttcatttgat ttgcatcctg gtaaaaaaat gataataaaa agactcaata tgaaactaat
     1021 aaggctagct ttaagtgtca taattatgtt tggtaataaa tttgctgcaa atatatgttt
     1081 cttcatatta acgaatatct atagcattta tttctctgtt tttgttcatt aatcggtatg
     1141 tcagtttatt gtgttgtttt tatacaattc tacattatgt cttgagatat tatctttggt
     1201 caattgtgag atctactatt ctcaagaaat tcataaaagc cttctccagc atcttcaagt
     1261 aaatccaaaa caagctcaaa gccttgttca cccccataat aagggtcagg gatttcatta
     1321 taactgaaat tatttgcaaa atccgtcatt ttaaaaagtt tctttaaatc atctttgtta
     1381 cgacccattg ctctcaaatt cctgagattc gaatcatcca tagctattat gtagtcaaat
     1441 ctatcccaat ctctattgga atcaaacggt cttgatattg aagtaaggtt gtaccctctt
     1501 ttaaccgcat gactttgcat acgcatgtca gcacattctc cttcgtgata agcatatgta
     1561 ccagacgaat caatttcaaa tttatcttgt accccctttt tgcgtacaag gcctttaaaa
     1621 actgcttctg cactaggaga acgacagata ttaccaagac atacaaaaag tatttttgtt
     1681 ttcattgtaa gtaac
//
LOCUS       DASCQP010000612         1877 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Bacteroidales bacterium isolate Fu_MAG_73
            c_000001842238, whole genome shotgun sequence.
ACCESSION   DASCQP010000612 DASCQP010000000
VERSION     DASCQP010000612.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34271031
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Bacteroidales bacterium (marine metagenome)
  ORGANISM  Bacteroidales bacterium
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales.
REFERENCE   1  (bases 1 to 1877)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1877)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 01:37:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,109
            CDSs (total)                      :: 2,087
            Genes (coding)                    :: 2,071
            CDSs (with protein)               :: 2,071
            Genes (RNA)                       :: 22
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 18
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 4 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1877
                     /organism="Bacteroidales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001842238"
                     /isolate="Fu_MAG_73"
                     /isolation_source="seawater"
                     /db_xref="taxon:2030927"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1764
                     /locus_tag="QF480_10545"
     CDS             <1..1764
                     /locus_tag="QF480_10545"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: protein motif:HMM:NF016724.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HJN07043.1"
                     /translation="GKVDQYQGRNQMTNPLVDLVGDQTGRIVAVYPQSEAAGLHTRQF
                     DSMAAEALRRVTGGRGFADPVPAWIRDTYRLVGRSAAFSGIHRPGSMKEVSEARRRLV
                     FDELLRIQLELVQRKVELERTTRGIAHSVEGDLVGAFHGALGFPLTGAQIRTIDEIGS
                     DLAEPHPMHRLLQGDVGSGKTVVAVTAMLAAVQGGHQGALMAPTGVLAEQHHLGVAEL
                     LGDLTVPDPSTLLGTRPLRVDLLTGRTPAPERRRITAELAAGSVDILIGTHALIQEGV
                     EFNSLGVVVIDEQHRFGVEQRAALREKNTDATVPDVLVMTATPIPRTAAMTVYGDLDV
                     SVLDEMPPGRTPIVTSWVEDAGEDVWQAVRSEVAAGRQAYVVCPLIEESENLEVRSAE
                     ETLAELSAGPLADLRLGLLHGRVGQADREEAMSRFRAGDLDVMVATTVIEVGVDVPNA
                     TIMVVLDAARFGIAQLHQLRGRVGRGVVASSCILVGEAPTPVSEERLRALVRSTDGFE
                     LAEVDLDLRGEGTIMGERQKGRNDLRLASLRRDREWVEVAREVAVGLVGDGDGMARHP
                     DLADEVALFLGEAESDFLLKS"
BASE COUNT          325 a          603 c          657 g          292 t
ORIGIN      
        1 ggcaaggtcg atcagtacca gggtcgcaac cagatgacga acccgctggt cgacctggtg
       61 ggtgaccaga cgggcaggat cgtcgccgtc tacccgcagt ccgaggcggc gggcctccat
      121 acccggcagt tcgactccat ggcagccgag gccctccgga gggtgaccgg gggccgtggg
      181 ttcgccgatc cggtgccggc ctggattcgt gacacgtacc gcctggttgg ccgctcagcc
      241 gccttcagcg gcatccacag gccgggctcc atgaaggagg tgtccgaggc caggcggcgc
      301 ctggtgtttg atgaactgct ccgcatccaa cttgagctgg tccaacgaaa ggtcgagctg
      361 gaacgaacaa cgagggggat cgcccacagc gtcgaaggcg atctggtcgg agcgttccac
      421 ggtgccctcg gatttcccct gaccggagcc cagatcagga caatcgacga gatcggctcc
      481 gacctggccg agccacaccc catgcacagg ctcctgcagg gagacgtcgg ctcaggcaag
      541 accgtcgtgg ccgtcaccgc aatgctggct gcggtgcagg gtggccacca gggggcactg
      601 atggccccca ccggggtgtt ggccgagcag caccacctgg gcgtggccga actgctcgga
      661 gacctcactg tccccgaccc gtcgaccctg ctggggaccc gacccctcag ggtggacctg
      721 ctcaccggtc gaacaccggc ccccgagcgc agacgcatca ccgcagaact ggcagcaggc
      781 agcgtggaca tcctcatagg cacgcatgcg ctgatccagg agggtgtcga gttcaactcc
      841 ctcggcgtcg tcgtgatcga cgaacagcac aggttcggcg tcgaacaacg tgcggcactc
      901 cgcgagaaga acaccgacgc aaccgttccc gacgtcctcg tcatgaccgc cacgcccatt
      961 cccaggacgg cagccatgac cgtctacggc gacctcgacg tgtcggtgct ggacgagatg
     1021 ccacccgggc ggacaccgat cgtcacctcg tgggtcgaag atgccggcga ggacgtctgg
     1081 caggccgtca ggtccgaggt cgctgccggg cgacaggcct acgtggtgtg ccccctgatc
     1141 gaggagtccg agaacctcga ggtccgatcg gccgaggaga cccttgcaga actgtccgcc
     1201 gggccgctgg ccgacctgcg gttggggctg ctccacgggc gtgtcggtca ggccgaccga
     1261 gaggaggcga tgagccggtt ccgtgctggc gacctcgacg tgatggtcgc caccacggtc
     1321 atcgaggtcg gcgtggacgt accgaacgcc accatcatgg tggtactcga tgcagcccgc
     1381 ttcggaattg cacagttgca ccagcttcgg ggaagggtgg gtcgcggggt ggtggccagc
     1441 agctgcatcc tcgtcggcga ggcgccgaca ccagtttccg aggagcggct gagggcgctg
     1501 gtccgcagca ccgacggctt tgaactggcc gaggtcgacc tggacctgcg tggggaggga
     1561 acgatcatgg gtgaaaggca aaagggccgc aacgacctgc ggctggcctc gttgcggcgc
     1621 gaccgggagt gggtcgaggt cgcccgtgag gtggcggtgg gactcgtggg cgacggagac
     1681 ggcatggccc gccatcccga cctggcagac gaggtggcgt tgtttctggg ggaggccgag
     1741 tcggactttc ttctcaagtc ctgaaccctg tgggtacgcg gtcgctacag gtcgggctcg
     1801 tcgtcggcca tgacgatgtc ccagcggtcc atgcagagct cacatctgta ggcgacggag
     1861 tcacccggct ccagatc
//
